chromosome 3R

Locus ID	Seq. ID	Location	Custom annotation	Window ID	Location	Strand	N	Length	Mean pairwise ID	z	SCI	P
1	3R_DroMel_CAF1	47,662 – 47,756	- - - - - - - - -	1	47,662 – 47,756	-	6	94	78.72	-2.60	0.56	0.954669
2	3R_DroMel_CAF1	58,824 – 58,932	- - - "knownCDS=Parent=FBtr0078967;Name=abs-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14637-RA" - - - - -	2	58,824 – 58,932	+	6	108	76.02	-1.53	0.71	0.919711
2	3R_DroMel_CAF1	58,824 – 58,932		3	58,824 – 58,932	-	6	108	76.02	-1.46	0.61	0.700127
3	3R_DroMel_CAF1	63,593 – 63,692	- - - - - - - - -	4	63,593 – 63,692	+	3	99	76.06	-1.67	0.63	0.766530
3	3R_DroMel_CAF1	63,593 – 63,692	- - - - - - - - -	5	63,593 – 63,692	-	3	99	76.06	-2.18	0.73	0.995898
4	3R_DroMel_CAF1	73,629 – 73,798	- - - "knownCDS=Parent=FBtr0078975;Name=CG14639-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14639-RA" - - - - -	6	73,629 – 73,741	+	6	112	83.69	-2.28	0.68	0.618895
4	3R_DroMel_CAF1	73,629 – 73,798		7	73,703 – 73,798	+	3	95	95.79	-1.63	0.93	0.569797
5	3R_DroMel_CAF1	120,931 – 121,031	- - - "knownCDS=Parent=FBtr0100500;Name=cpx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32490-RK" - - - - -	8	120,931 – 121,031	-	6	115	79.30	-1.42	0.63	0.568918
6	3R_DroMel_CAF1	121,085 – 121,199	- - "RNAmicro=f:121097_t:121215_strand:+_p:0.999896" - - - - - -	9	121,085 – 121,176	+	6	98	82.04	-6.56	0.94	0.959581
				10	121,085 – 121,176	-	6	98	82.04	-5.27	0.92	0.977575
				11	121,097 – 121,199	+	6	119	74.97	-5.44	0.87	0.909776
				12	121,097 – 121,199	-	6	119	74.97	-3.75	0.81	0.972654
7	3R_DroMel_CAF1	122,749 – 122,864	- - - - - - - - -	13	122,749 – 122,843	+	6	105	80.92	-4.19	0.53	0.980466
7	3R_DroMel_CAF1	122,749 – 122,864	- - - - - - - - -	14	122,768 – 122,864	+	6	102	82.70	-3.98	0.61	0.940538
8	3R_DroMel_CAF1	123,128 – 123,311	- - - "knownCDS=Parent=FBtr0078900, FBtr0078901;Name=cpx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32490-RC, FlyBase+Annotation+IDs:CG32490-RA" - - - - -	15	123,128 – 123,242	+	6	120	95.44	-1.07	0.95	0.857869
				16	123,128 – 123,242	-	6	120	95.44	-2.45	0.90	0.997211
				17	123,163 – 123,282	+	6	120	99.00	-1.05	0.94	0.758333
				18	123,163 – 123,282	-	6	120	99.00	-1.82	0.99	0.999192
				19	123,203 – 123,311	+	6	110	94.02	-1.86	0.98	0.999334
				20	123,203 – 123,311	-	6	110	94.02	-1.12	0.94	0.840710
9	3R_DroMel_CAF1	136,021 – 136,118	- - - - - - - - -	21	136,021 – 136,118	+	6	97	81.10	-1.88	0.61	0.661265
10	3R_DroMel_CAF1	138,643 – 138,748	- - - - - - - - -	22	138,643 – 138,748	+	6	106	81.43	-1.50	0.67	0.572223
10	3R_DroMel_CAF1	138,643 – 138,748	- - - - - - - - -	23	138,643 – 138,748	-	6	106	81.43	-1.60	0.68	0.646443
11	3R_DroMel_CAF1	143,236 – 143,351	- - - - - - - - -	24	143,236 – 143,351	-	4	120	76.29	-1.82	0.64	0.807213
12	3R_DroMel_CAF1	143,745 – 143,862	- - - "knownCDS=Parent=FBtr0078957;Name=CG9778-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9778-RA" - - - - -	25	143,745 – 143,862	-	6	117	79.45	-1.31	0.73	0.716111
13	3R_DroMel_CAF1	158,967 – 159,072	- - - "knownCDS=Parent=FBtr0078955;Name=CG9776-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9776-RA" - - - - -	26	158,967 – 159,072	-	6	111	81.43	-1.83	0.68	0.743309
14	3R_DroMel_CAF1	164,797 – 164,917	- - - "knownCDS=Parent=FBtr0078909;Name=CG1103-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1103-RA" - - - - -	27	164,797 – 164,917	+	6	120	77.56	-1.99	0.53	0.785668
15	3R_DroMel_CAF1	174,845 – 174,980	- - - - - - - - -	28	174,845 – 174,955	+	5	120	80.47	-1.89	0.54	0.537972
15	3R_DroMel_CAF1	174,845 – 174,980	- - - - - - - - -	29	174,881 – 174,980	+	5	112	73.94	-1.93	0.57	0.921959
16	3R_DroMel_CAF1	180,176 – 180,282	- - - - - - - - -	30	180,176 – 180,282	+	6	120	78.86	-1.71	0.57	0.626359
17	3R_DroMel_CAF1	186,734 – 186,826	- - - - - - - - -	31	186,734 – 186,826	+	5	92	84.67	-1.76	0.74	0.694417
17	3R_DroMel_CAF1	186,734 – 186,826	- - - - - - - - -	32	186,734 – 186,826	-	5	92	84.67	-1.74	0.75	0.683220
18	3R_DroMel_CAF1	189,415 – 189,529	- - - "knownCDS=Parent=FBtr0078912;Name=CG1090-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1090-RB" - - - - -	33	189,415 – 189,529	+	6	120	80.23	-1.76	0.71	0.833989
19	3R_DroMel_CAF1	189,911 – 190,018	- - - "knownCDS=Parent=FBtr0078912;Name=CG1090-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1090-RB" - - - - -	34	189,911 – 190,018	-	6	113	74.30	-1.04	0.67	0.595257
20	3R_DroMel_CAF1	190,266 – 190,360	- - - "knownCDS=Parent=FBtr0078911;Name=CG1090-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1090-RA" - - - - -	35	190,266 – 190,360	+	6	100	78.35	-1.32	0.90	0.830993
21	3R_DroMel_CAF1	191,084 – 191,204	- - - "knownCDS=Parent=FBtr0078912;Name=CG1090-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1090-RB" - - - - -	36	191,084 – 191,204	+	6	120	93.94	-1.62	0.87	0.797587
21	3R_DroMel_CAF1	191,084 – 191,204		37	191,084 – 191,204	-	6	120	93.94	-2.63	0.89	0.997618
22	3R_DroMel_CAF1	192,331 – 192,426	- - - - - - - - -	38	192,331 – 192,426	-	5	98	87.31	-2.37	0.72	0.890283
23	3R_DroMel_CAF1	205,251 – 205,371	- - - "knownCDS=Parent=FBtr0078913, FBtr0078915;Name=CG11739-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11739-RC, FlyBase+Annotation+IDs:CG11739-RD" - - - - -	39	205,251 – 205,371	+	5	120	91.33	-1.29	0.83	0.519818
23	3R_DroMel_CAF1	205,251 – 205,371		40	205,251 – 205,371	-	5	120	91.33	-2.11	0.87	0.993958
24	3R_DroMel_CAF1	217,342 – 217,433	- - - "knownCDS=Parent=FBtr0078919;Name=CG14646-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14646-RA" - - - - -	41	217,342 – 217,433	-	5	91	89.67	-2.21	0.83	0.983127
25	3R_DroMel_CAF1	225,046 – 225,149	- - - - - - - - -	42	225,046 – 225,149	+	6	104	81.19	-1.69	0.60	0.500000
26	3R_DroMel_CAF1	229,804 – 229,898	- - - - - - - - -	43	229,804 – 229,898	+	6	115	83.30	-1.58	0.70	0.500000
27	3R_DroMel_CAF1	231,934 – 232,089	- - - - - - - - -	44	231,934 – 232,051	+	6	120	79.89	-2.00	0.67	0.876311
27	3R_DroMel_CAF1	231,934 – 232,089	- - - - - - - - -	45	231,974 – 232,089	-	6	116	80.58	-1.60	0.60	0.507508
28	3R_DroMel_CAF1	257,282 – 257,402	- - - "knownCDS=Parent=FBtr0078944;Name=eIF3-S10-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9805-RA" - - - - -	46	257,282 – 257,402	+	6	120	82.94	-2.24	0.59	0.521697
29	3R_DroMel_CAF1	258,451 – 258,731	- - - "knownCDS=Parent=FBtr0078944;Name=eIF3-S10-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9805-RA" - - - - -	47	258,451 – 258,571	+	6	120	84.50	-2.30	0.71	0.588533
				48	258,451 – 258,571	-	6	120	84.50	-1.68	0.76	0.514144
				49	258,491 – 258,611	+	6	120	85.17	-2.90	0.72	0.708953
				50	258,491 – 258,611	-	6	120	85.17	-2.55	0.77	0.753088
				51	258,611 – 258,731	-	6	120	82.61	-1.92	0.81	0.813606
30	3R_DroMel_CAF1	263,332 – 263,422	- - - "knownCDS=Parent=FBtr0078926;Name=CG14650-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14650-RA" - - - - -	52	263,332 – 263,422	+	4	90	92.59	-1.48	0.90	0.668392
31	3R_DroMel_CAF1	271,077 – 271,177	- - - "knownCDS=Parent=FBtr0078941;Name=CG31522-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31522-RD" - - - - -	53	271,077 – 271,177	+	6	120	76.42	-1.36	0.70	0.838345
32	3R_DroMel_CAF1	271,883 – 271,995	- - - "knownCDS=Parent=FBtr0078942;Name=CG31522-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31522-RA" - - - - -	54	271,883 – 271,995	+	6	120	83.65	-1.79	0.85	0.769867
33	3R_DroMel_CAF1	276,197 – 276,291	- - - - - - - - -	55	276,197 – 276,291	+	4	97	78.98	-2.27	0.53	0.749093
34	3R_DroMel_CAF1	281,011 – 281,131	- - - - - - - - -	56	281,011 – 281,131	+	5	120	89.92	-1.22	0.88	0.509493
35	3R_DroMel_CAF1	281,324 – 281,437	- - - - - - - - -	57	281,324 – 281,437	+	4	120	88.27	-1.66	0.74	0.650773
36	3R_DroMel_CAF1	284,166 – 284,295	- - - - - - - - -	58	284,166 – 284,270	-	5	120	84.96	-2.09	0.64	0.647749
36	3R_DroMel_CAF1	284,166 – 284,295	- - - - - - - - -	59	284,190 – 284,295	-	5	105	90.29	-2.40	0.67	0.500000
37	3R_DroMel_CAF1	293,061 – 293,163	- - - "knownCDS=Parent=FBtr0078935, FBtr0078936, FBtr0078937, FBtr0078938;Name=CG31523-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31523-RC, FlyBase+Annotation+IDs:CG31523-RB, FlyBase+Annotation+IDs:CG31523-RA, FlyBase+Annotation+IDs:CG31523-RD" - - - - -	60	293,061 – 293,163	+	6	111	72.11	-2.72	0.44	0.995622
37	3R_DroMel_CAF1	293,061 – 293,163		61	293,061 – 293,163	-	6	111	72.11	-2.64	0.46	0.995042
38	3R_DroMel_CAF1	295,520 – 295,617	- - - - - - - - -	62	295,520 – 295,617	-	5	98	94.25	-1.76	0.90	0.986351
39	3R_DroMel_CAF1	296,971 – 297,070	- - - - - - - - -	63	296,971 – 297,070	+	5	99	97.58	-1.67	0.94	0.977428
40	3R_DroMel_CAF1	297,996 – 298,086	- - - - - - - - -	64	297,996 – 298,086	+	4	102	80.31	-1.80	0.65	0.687507
41	3R_DroMel_CAF1	298,166 – 298,357	- - - - - - - - -	65	298,166 – 298,286	+	5	120	92.06	-1.60	0.93	0.978834
41	3R_DroMel_CAF1	298,166 – 298,357	- - - - - - - - -	66	298,246 – 298,357	+	5	120	86.45	-1.52	0.81	0.589367
42	3R_DroMel_CAF1	298,621 – 298,729	- - - - - - - - -	67	298,621 – 298,729	-	5	118	84.12	-1.92	0.72	0.773277
43	3R_DroMel_CAF1	302,415 – 302,525	- - - - - - - - -	68	302,415 – 302,525	+	3	118	84.48	-3.83	0.65	0.965414
43	3R_DroMel_CAF1	302,415 – 302,525	- - - - - - - - -	69	302,415 – 302,525	-	3	118	84.48	-2.40	0.62	0.618704
44	3R_DroMel_CAF1	302,675 – 302,795	- - - - - - - - -	70	302,675 – 302,795	+	5	120	73.40	-2.01	0.37	0.905634
45	3R_DroMel_CAF1	304,096 – 304,194	- - - - - - - - -	71	304,096 – 304,194	-	4	119	82.33	-2.14	0.60	0.747138
46	3R_DroMel_CAF1	304,357 – 304,510	- - - - - - - - -	72	304,357 – 304,471	-	4	120	73.16	-1.73	0.67	0.914275
46	3R_DroMel_CAF1	304,357 – 304,510	- - - - - - - - -	73	304,395 – 304,510	-	4	120	91.51	-1.77	0.82	0.747520
47	3R_DroMel_CAF1	306,870 – 306,990	- - - "knownCDS=Parent=FBtr0078927;Name=CG14651-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14651-RA" - - - - -	74	306,870 – 306,990	+	5	120	92.25	-1.88	0.87	0.983364
47	3R_DroMel_CAF1	306,870 – 306,990		75	306,870 – 306,990	-	5	120	92.25	-1.68	0.74	0.500000
48	3R_DroMel_CAF1	307,310 – 307,430	- - - "knownCDS=Parent=FBtr0078927;Name=CG14651-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14651-RA" - - - - -	76	307,310 – 307,430	+	5	120	94.58	-1.25	0.94	0.842139
48	3R_DroMel_CAF1	307,310 – 307,430		77	307,310 – 307,430	-	5	120	94.58	-1.22	0.90	0.696084
49	3R_DroMel_CAF1	307,510 – 307,630	- - - "knownCDS=Parent=FBtr0078927;Name=CG14651-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14651-RA" - - - - -	78	307,510 – 307,630	-	5	120	94.25	-1.53	0.83	0.782514
50	3R_DroMel_CAF1	307,750 – 307,870	- - - "knownCDS=Parent=FBtr0078927;Name=CG14651-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14651-RA" - - - - -	79	307,750 – 307,870	+	5	120	94.25	-1.92	0.92	0.996929
51	3R_DroMel_CAF1	308,190 – 308,310	- - - "knownCDS=Parent=FBtr0078927;Name=CG14651-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14651-RA" - - - - -	80	308,190 – 308,310	+	5	120	94.25	-2.10	0.91	0.998580
51	3R_DroMel_CAF1	308,190 – 308,310		81	308,190 – 308,310	-	5	120	94.25	-1.67	0.90	0.974828
52	3R_DroMel_CAF1	308,910 – 309,110	- - - "knownCDS=Parent=FBtr0078927;Name=CG14651-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14651-RA" - - - - -	82	308,910 – 309,030	+	5	120	95.25	-1.61	0.82	0.706654
				83	308,910 – 309,030	-	5	120	95.25	-1.22	0.90	0.662513
				84	308,950 – 309,070	-	5	120	94.42	-1.83	0.88	0.982920
				85	308,990 – 309,110	+	5	120	96.42	-1.28	0.89	0.667829
53	3R_DroMel_CAF1	310,903 – 311,063	- - - "knownCDS=Parent=FBtr0078928;Name=CG1078-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1078-RA" - - - - -	86	310,903 – 311,023	+	4	120	92.78	-1.40	0.93	0.656468
				87	310,943 – 311,063	+	4	120	94.58	-2.88	0.93	0.991423
				88	310,943 – 311,063	-	4	120	94.58	-1.48	0.88	0.530775
54	3R_DroMel_CAF1	318,439 – 318,554	- - - - - - - - -	89	318,439 – 318,554	+	4	120	88.83	-1.97	0.78	0.835163
55	3R_DroMel_CAF1	319,558 – 319,715	- - - "knownCDS=Parent=FBtr0078934;Name=CG9783-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9783-RA" - - - - -	90	319,558 – 319,675	-	6	120	80.82	-1.55	0.64	0.601265
				91	319,598 – 319,715	+	6	120	75.42	-1.16	0.72	0.808342
				92	319,598 – 319,715	-	6	120	75.42	-1.30	0.63	0.647561
56	3R_DroMel_CAF1	328,199 – 328,319	- - - "knownCDS=Parent=FBtr0078933;Name=CG12584-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12584-RA" - - - - -	93	328,199 – 328,319	-	6	120	79.94	-1.86	0.59	0.699286
57	3R_DroMel_CAF1	330,492 – 330,591	- - - "knownCDS=Parent=FBtr0078933;Name=CG12584-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12584-RA" - - - - -	94	330,492 – 330,591	+	6	99	72.30	-2.63	0.40	0.990863
57	3R_DroMel_CAF1	330,492 – 330,591		95	330,492 – 330,591	-	6	99	72.30	-1.68	0.45	0.523579
58	3R_DroMel_CAF1	330,750 – 330,868	- - - "knownCDS=Parent=FBtr0078933;Name=CG12584-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12584-RA" - - - - -	96	330,750 – 330,868	+	6	118	86.33	-2.10	0.78	0.597183
59	3R_DroMel_CAF1	331,148 – 331,268	- - - "knownCDS=Parent=FBtr0078933;Name=CG12584-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12584-RA" - - - - -	97	331,148 – 331,268	-	6	120	73.17	-2.42	0.34	0.924623
60	3R_DroMel_CAF1	353,506 – 353,597	- - - - - - - - -	98	353,506 – 353,597	-	4	99	85.19	-1.46	0.72	0.543760
61	3R_DroMel_CAF1	356,324 – 356,511	- - - - - - - - -	99	356,324 – 356,443	+	3	120	96.67	-1.69	0.91	0.534025
61	3R_DroMel_CAF1	356,324 – 356,511	- - - - - - - - -	100	356,403 – 356,511	+	3	108	89.27	-2.13	0.74	0.523558
62	3R_DroMel_CAF1	368,358 – 368,700	- - - "knownCDS=Parent=FBtr0078930;Name=CG12586-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12586-RA" - - - - -	101	368,358 – 368,478	+	4	120	91.11	-1.48	0.83	0.578844
				102	368,358 – 368,478	-	4	120	91.11	-1.58	0.88	0.746837
				103	368,398 – 368,500	+	4	120	83.78	-3.21	0.81	0.997266
				104	368,398 – 368,500	-	4	120	83.78	-4.23	0.83	0.998826
				105	368,438 – 368,540	+	4	120	83.48	-2.52	0.81	0.984997
				106	368,438 – 368,540	-	4	120	83.48	-4.42	0.78	0.998498
				107	368,478 – 368,580	+	4	120	86.34	-2.37	0.86	0.976203
				108	368,478 – 368,580	-	4	120	86.34	-4.71	0.84	0.994554
				109	368,500 – 368,620	+	4	120	95.97	-2.03	0.94	0.918249
				110	368,500 – 368,620	-	4	120	95.97	-5.01	0.97	0.938256
				111	368,540 – 368,660	+	4	120	94.03	-2.37	0.90	0.969274
				112	368,540 – 368,660	-	4	120	94.03	-4.80	0.97	0.982831
				113	368,580 – 368,700	+	4	120	89.44	-1.78	0.79	0.758093
				114	368,580 – 368,700	-	4	120	89.44	-2.90	0.81	0.977923
63	3R_DroMel_CAF1	376,218 – 376,331	- - - - - - - - -	115	376,218 – 376,331	+	4	114	85.76	-1.60	0.73	0.638924
64	3R_DroMel_CAF1	380,922 – 381,015	- - - - - - - - -	116	380,922 – 381,015	-	6	103	76.23	-2.81	0.37	0.957263
65	3R_DroMel_CAF1	406,802 – 406,922	- - - - - - - - -	117	406,802 – 406,922	+	3	120	86.94	-2.56	0.73	0.794149
66	3R_DroMel_CAF1	416,206 – 416,326	- - - - - - - - -	118	416,206 – 416,326	+	3	120	92.50	-1.62	0.96	0.732912
67	3R_DroMel_CAF1	465,104 – 465,217	- - - "knownCDS=Parent=FBtr0078894, FBtr0078895;Name=CG9775-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9775-RA, FlyBase+Annotation+IDs:CG9775-RC" - - - - -	119	465,104 – 465,217	+	6	115	80.82	-2.22	0.58	0.763157
67	3R_DroMel_CAF1	465,104 – 465,217		120	465,104 – 465,217	-	6	115	80.82	-2.08	0.68	0.849347
68	3R_DroMel_CAF1	467,687 – 467,807	- - - - - - - - -	121	467,687 – 467,807	+	5	120	90.00	-2.56	0.85	0.998136
68	3R_DroMel_CAF1	467,687 – 467,807	- - - - - - - - -	122	467,687 – 467,807	-	5	120	90.00	-2.04	0.78	0.917619
69	3R_DroMel_CAF1	474,467 – 474,565	- - - - - - - - -	123	474,467 – 474,565	-	3	100	77.19	-1.70	0.69	0.866267
70	3R_DroMel_CAF1	475,576 – 475,666	- - - - - - - - -	124	475,576 – 475,666	-	4	105	80.00	-1.97	0.79	0.931062
71	3R_DroMel_CAF1	477,247 – 477,367	- - - "knownCDS=Parent=FBtr0078860;Name=Karybeta3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1059-RA" - - - - -	125	477,247 – 477,367	-	6	120	79.67	-1.81	0.57	0.605116
72	3R_DroMel_CAF1	482,045 – 482,264	- - "RNAmicro=f:482144_t:482263_strand:+_p:0.999973" "knownCDS=Parent=FBtr0078861;Name=CG12001-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12001-RA" - - - - -	126	482,045 – 482,144	+	6	120	71.60	-1.74	0.41	0.520021
				127	482,144 – 482,264	+	6	120	75.14	-3.96	0.39	0.998471
				128	482,144 – 482,264	-	6	120	75.14	-4.48	0.51	0.998489
73	3R_DroMel_CAF1	491,102 – 491,207	- - - - - - - - -	129	491,102 – 491,207	-	4	120	64.67	-1.85	0.60	0.991398
74	3R_DroMel_CAF1	491,444 – 491,535	- - - - - - - - -	130	491,444 – 491,535	+	6	104	78.25	-1.80	0.58	0.744068
75	3R_DroMel_CAF1	492,482 – 492,578	- - - - - - - - -	131	492,482 – 492,578	+	6	110	79.96	-1.82	0.61	0.726945
75	3R_DroMel_CAF1	492,482 – 492,578	- - - - - - - - -	132	492,482 – 492,578	-	6	110	79.96	-2.51	0.43	0.573197
76	3R_DroMel_CAF1	498,988 – 499,088	- - - - - - - - -	133	498,988 – 499,088	-	5	100	76.29	-1.95	0.52	0.821054
77	3R_DroMel_CAF1	500,587 – 500,690	- - - - - - - - -	134	500,587 – 500,690	-	5	120	79.20	-1.84	0.11	0.672129
78	3R_DroMel_CAF1	502,077 – 502,175	- - - - - - - - -	135	502,077 – 502,175	+	6	113	71.39	-1.84	0.50	0.881851
79	3R_DroMel_CAF1	503,175 – 503,269	- - - - - - - - -	136	503,175 – 503,269	+	5	117	74.86	-1.70	0.26	0.616930
80	3R_DroMel_CAF1	506,800 – 506,891	- - - - - - - - -	137	506,800 – 506,891	+	4	106	71.74	-1.86	0.64	0.965071
81	3R_DroMel_CAF1	507,608 – 507,698	- - - - - - - - -	138	507,608 – 507,698	-	3	115	81.16	-2.54	0.84	0.988640
82	3R_DroMel_CAF1	510,716 – 510,916	- - - - - - - - -	139	510,716 – 510,836	-	3	120	90.00	-2.54	0.77	0.739464
				140	510,756 – 510,876	-	3	120	87.64	-2.79	0.65	0.649602
				141	510,796 – 510,916	-	4	120	90.54	-1.68	0.71	0.500000
83	3R_DroMel_CAF1	511,619 – 511,750	- - - - - - - - -	142	511,619 – 511,719	+	3	100	84.41	-1.82	0.69	0.523308
83	3R_DroMel_CAF1	511,619 – 511,750	- - - - - - - - -	143	511,659 – 511,750	+	4	93	81.83	-2.16	0.68	0.910471
84	3R_DroMel_CAF1	517,910 – 518,004	- - - - - - - - -	144	517,910 – 518,004	+	6	102	81.93	-1.84	0.61	0.532833
85	3R_DroMel_CAF1	521,531 – 521,621	- - - - - - - - -	145	521,531 – 521,621	-	3	90	86.36	-1.45	0.89	0.639890
86	3R_DroMel_CAF1	526,275 – 526,399	- - - - - - - - -	146	526,275 – 526,372	+	4	100	90.69	-2.41	0.93	0.990618
86	3R_DroMel_CAF1	526,275 – 526,399	- - - - - - - - -	147	526,307 – 526,399	-	4	96	82.87	-1.79	0.66	0.664042
87	3R_DroMel_CAF1	529,506 – 529,604	- - - "knownCDS=Parent=FBtr0078863;Name=CG31531-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31531-RB" - - - - -	148	529,506 – 529,604	-	6	98	78.98	-1.09	0.68	0.500000
88	3R_DroMel_CAF1	534,595 – 534,715	- - - "knownCDS=Parent=FBtr0078865;Name=CG31534-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31534-RA" - - - - -	149	534,595 – 534,715	-	6	120	81.50	-1.70	0.72	0.732974
89	3R_DroMel_CAF1	536,333 – 536,451	- - - "knownCDS=Parent=FBtr0078866;Name=CG31534-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31534-RB" - - - - -	150	536,333 – 536,451	+	6	120	79.35	-1.50	0.74	0.819303
90	3R_DroMel_CAF1	561,330 – 561,443	- - - "knownCDS=Parent=FBtr0089952, FBtr0089953, FBtr0089954, FBtr0089955;Name=tacc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9765-RD, FlyBase+Annotation+IDs:CG9765-RC, FlyBase+Annotation+IDs:CG9765-RB, FlyBase+Annotation+IDs:CG9765-RA" - - - - -	151	561,330 – 561,443	+	6	114	71.96	-1.26	0.61	0.606274
91	3R_DroMel_CAF1	567,988 – 568,081	- - - "knownCDS=Parent=FBtr0089952, FBtr0089953, FBtr0089955;Name=tacc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9765-RD, FlyBase+Annotation+IDs:CG9765-RC, FlyBase+Annotation+IDs:CG9765-RA" - - - - -	152	567,988 – 568,081	+	6	102	78.89	-1.67	0.57	0.572011
92	3R_DroMel_CAF1	578,502 – 578,615	- - - "knownCDS=Parent=FBtr0078882;Name=CG31530-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31530-RA" - - - - -	153	578,502 – 578,615	+	6	120	77.16	-1.65	0.56	0.633749
92	3R_DroMel_CAF1	578,502 – 578,615		154	578,502 – 578,615	-	6	120	77.16	-1.72	0.64	0.877793
93	3R_DroMel_CAF1	588,972 – 589,105	- - - - - - - - -	155	588,972 – 589,069	+	6	111	75.47	-1.85	0.64	0.944775
				156	588,972 – 589,069	-	6	111	75.47	-1.53	0.67	0.895618
				157	588,999 – 589,105	+	6	111	71.23	-2.19	0.64	0.991435
				158	588,999 – 589,105	-	6	111	71.23	-2.14	0.63	0.989703
94	3R_DroMel_CAF1	598,520 – 598,616	- - - - - - - - -	159	598,520 – 598,616	-	5	98	77.89	-3.48	0.48	0.999476
95	3R_DroMel_CAF1	600,597 – 600,692	- - - - - - - - -	160	600,597 – 600,692	+	3	95	95.09	-2.12	0.95	0.902089
96	3R_DroMel_CAF1	601,384 – 601,502	- - - "knownCDS=Parent=FBtr0078868;Name=atms-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2503-RA" - - - - -	161	601,384 – 601,502	+	4	119	90.42	-2.12	0.78	0.846364
96	3R_DroMel_CAF1	601,384 – 601,502		162	601,384 – 601,502	-	4	119	90.42	-1.46	0.79	0.525989
97	3R_DroMel_CAF1	603,011 – 603,101	- - - "knownCDS=Parent=FBtr0078868;Name=atms-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2503-RA" - - - - -	163	603,011 – 603,101	-	6	96	79.20	-1.78	0.55	0.559127
98	3R_DroMel_CAF1	606,356 – 606,480	- - - - - - - - -	164	606,356 – 606,451	-	3	96	90.88	-1.40	0.94	0.565587
				165	606,390 – 606,480	+	3	91	87.78	-1.64	0.90	0.724423
				166	606,390 – 606,480	-	3	91	87.78	-4.06	0.97	0.993041
99	3R_DroMel_CAF1	607,612 – 607,704	- - - "knownCDS=Parent=FBtr0078880;Name=CG17387-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17387-RA" - - - - -	167	607,612 – 607,704	+	6	92	85.72	-2.42	0.82	0.866796
99	3R_DroMel_CAF1	607,612 – 607,704		168	607,612 – 607,704	-	6	92	85.72	-2.43	0.75	0.628817
100	3R_DroMel_CAF1	613,531 – 613,641	- - - "knownCDS=Parent=FBtr0078879;Name=CG17735-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17735-RA" - - - - -	169	613,531 – 613,641	-	6	120	79.33	-1.29	0.66	0.582990
101	3R_DroMel_CAF1	614,515 – 614,626	- - - - - - - - -	170	614,515 – 614,626	-	6	113	80.12	-1.27	0.77	0.681576
102	3R_DroMel_CAF1	628,827 – 628,929	- - - - - - - - -	171	628,827 – 628,929	+	4	116	80.12	-2.04	0.59	0.711276
103	3R_DroMel_CAF1	629,972 – 630,103	- - - - - - - - -	172	629,972 – 630,069	+	4	106	83.01	-3.49	0.68	0.996107
				173	629,972 – 630,069	-	4	106	83.01	-2.30	0.66	0.907923
				174	630,004 – 630,103	-	4	100	89.50	-1.74	0.71	0.596457
104	3R_DroMel_CAF1	633,152 – 633,264	- - - - - - - - -	175	633,152 – 633,264	+	3	116	85.59	-2.89	0.64	0.809695
105	3R_DroMel_CAF1	635,646 – 635,744	- - - - - - - - -	176	635,646 – 635,744	+	4	98	86.11	-1.43	0.89	0.625632
106	3R_DroMel_CAF1	641,315 – 641,419	- - - "knownCDS=Parent=FBtr0078870, FBtr0078871;Name=CG1129-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1129-RB, FlyBase+Annotation+IDs:CG1129-RA" - - - - -	177	641,315 – 641,419	-	6	120	75.51	-1.09	0.65	0.506555
107	3R_DroMel_CAF1	645,409 – 645,499	- - - - - - - - -	178	645,409 – 645,499	+	6	97	77.14	-1.47	0.60	0.618561
108	3R_DroMel_CAF1	649,789 – 649,879	- - - - - - - - -	179	649,789 – 649,879	+	3	94	81.29	-2.78	0.70	0.983319
108	3R_DroMel_CAF1	649,789 – 649,879	- - - - - - - - -	180	649,789 – 649,879	-	3	94	81.29	-2.67	0.59	0.877501
109	3R_DroMel_CAF1	651,060 – 651,153	- - - - - - - - -	181	651,060 – 651,153	+	5	103	73.47	-2.54	0.29	0.996144
110	3R_DroMel_CAF1	652,511 – 652,612	- - - - - - - - -	182	652,511 – 652,612	-	3	101	89.33	-2.77	0.70	0.676706
111	3R_DroMel_CAF1	660,492 – 660,585	- - - - - - - - -	183	660,492 – 660,585	+	6	95	81.44	-1.57	0.71	0.682124
112	3R_DroMel_CAF1	663,040 – 663,136	- - - - - - - - -	184	663,040 – 663,136	+	5	100	85.68	-1.68	0.71	0.560165
113	3R_DroMel_CAF1	664,151 – 664,246	- - - - - - - - -	185	664,151 – 664,246	+	5	115	59.77	-1.45	0.58	0.841036
114	3R_DroMel_CAF1	665,338 – 665,430	- - - - - - - - -	186	665,338 – 665,430	+	3	94	77.27	-3.27	0.85	0.999817
114	3R_DroMel_CAF1	665,338 – 665,430	- - - - - - - - -	187	665,338 – 665,430	-	3	94	77.27	-1.67	0.63	0.678048
115	3R_DroMel_CAF1	666,895 – 667,011	- - - - - - - - -	188	666,895 – 667,011	+	4	120	67.68	-1.95	0.44	0.658504
116	3R_DroMel_CAF1	668,410 – 668,508	- - - - - - - - -	189	668,410 – 668,508	+	6	102	71.49	-1.97	0.44	0.871295
116	3R_DroMel_CAF1	668,410 – 668,508	- - - - - - - - -	190	668,410 – 668,508	-	6	102	71.49	-1.76	0.72	0.983769
117	3R_DroMel_CAF1	670,587 – 670,692	- - - - - - - - -	191	670,587 – 670,692	+	6	117	77.32	-1.44	0.66	0.778559
118	3R_DroMel_CAF1	671,352 – 671,455	- - - - - - - - -	192	671,352 – 671,455	-	6	105	75.48	-3.11	0.32	0.977093
119	3R_DroMel_CAF1	672,388 – 672,506	- - - - - - - - -	193	672,388 – 672,492	+	6	105	83.49	-2.07	0.75	0.720527
				194	672,388 – 672,492	-	6	105	83.49	-2.98	0.74	0.875216
				195	672,413 – 672,506	-	6	111	83.02	-2.26	0.63	0.599031
120	3R_DroMel_CAF1	673,551 – 673,641	- - - - - - - - -	196	673,551 – 673,641	+	3	96	86.81	-2.68	0.64	0.633748
121	3R_DroMel_CAF1	677,602 – 677,705	- - - - - - - - -	197	677,602 – 677,705	+	3	108	90.12	-3.33	0.68	0.720570
121	3R_DroMel_CAF1	677,602 – 677,705	- - - - - - - - -	198	677,602 – 677,705	-	3	108	90.12	-3.15	0.64	0.524692
122	3R_DroMel_CAF1	680,000 – 680,127	- - - - - - - - -	199	680,000 – 680,100	+	6	113	78.13	-2.66	0.56	0.972014
				200	680,000 – 680,100	-	6	113	78.13	-3.12	0.56	0.989132
				201	680,028 – 680,127	+	6	104	80.29	-1.67	0.64	0.699569
123	3R_DroMel_CAF1	681,231 – 681,370	- - - - - - - - -	202	681,231 – 681,351	+	5	120	96.08	-1.72	0.91	0.980154
123	3R_DroMel_CAF1	681,231 – 681,370	- - - - - - - - -	203	681,271 – 681,370	+	5	120	84.89	-2.70	0.72	0.969592
124	3R_DroMel_CAF1	681,743 – 681,871	- - - - - - - - -	204	681,743 – 681,839	+	5	120	85.20	-2.30	0.72	0.902221
124	3R_DroMel_CAF1	681,743 – 681,871	- - - - - - - - -	205	681,766 – 681,871	-	5	120	93.35	-2.19	0.75	0.751362
125	3R_DroMel_CAF1	688,180 – 688,278	- - - - - - - - -	206	688,180 – 688,278	+	6	118	77.68	-1.81	0.51	0.549365
126	3R_DroMel_CAF1	689,720 – 689,817	- - - - - - - - -	207	689,720 – 689,817	-	6	120	77.78	-1.40	0.91	0.882592
127	3R_DroMel_CAF1	696,813 – 696,904	- - - - - - - - -	208	696,813 – 696,904	-	3	94	82.78	-3.28	0.86	0.994220
128	3R_DroMel_CAF1	697,635 – 697,739	- - - - - - - - -	209	697,635 – 697,739	+	6	120	80.81	-2.06	0.65	0.816618
129	3R_DroMel_CAF1	699,606 – 699,736	- - - - - - - - -	210	699,606 – 699,716	-	4	118	73.98	-2.68	0.40	0.798616
129	3R_DroMel_CAF1	699,606 – 699,736	- - - - - - - - -	211	699,639 – 699,736	-	4	105	75.25	-2.28	0.62	0.987013
130	3R_DroMel_CAF1	702,402 – 702,519	- - - - - - - - -	212	702,402 – 702,519	-	4	117	83.76	-2.61	0.77	0.983598
131	3R_DroMel_CAF1	706,414 – 706,504	- - - - - - - - -	213	706,414 – 706,504	+	6	108	78.18	-2.01	0.76	0.954654
132	3R_DroMel_CAF1	707,919 – 708,009	- - - - - - - - -	214	707,919 – 708,009	+	3	91	73.12	-3.35	0.74	0.999997
133	3R_DroMel_CAF1	723,656 – 723,757	- - - - - - - - -	215	723,656 – 723,757	+	6	103	75.46	-1.57	0.63	0.848625
134	3R_DroMel_CAF1	726,993 – 727,123	- - - - - - - - -	216	726,993 – 727,097	-	6	120	89.85	-1.21	0.93	0.705839
134	3R_DroMel_CAF1	726,993 – 727,123	- - - - - - - - -	217	727,023 – 727,123	-	6	118	81.05	-1.21	0.75	0.566197
135	3R_DroMel_CAF1	734,824 – 734,936	- - - - - - - - -	218	734,824 – 734,936	-	6	119	77.61	-1.41	0.67	0.770433
136	3R_DroMel_CAF1	736,298 – 736,418	- - - - - - - - -	219	736,298 – 736,418	+	5	120	92.67	-1.84	0.78	0.817091
137	3R_DroMel_CAF1	738,797 – 738,891	- - - - - - - - -	220	738,797 – 738,891	+	5	95	80.09	-2.05	0.61	0.847276
138	3R_DroMel_CAF1	739,398 – 739,518	- - - - - - - - -	221	739,398 – 739,518	+	4	120	91.53	-1.42	0.83	0.525256
138	3R_DroMel_CAF1	739,398 – 739,518	- - - - - - - - -	222	739,398 – 739,518	-	4	120	91.53	-1.78	0.79	0.689888
139	3R_DroMel_CAF1	740,034 – 740,227	- - - - - - - - -	223	740,034 – 740,149	-	3	119	86.82	-2.22	0.81	0.788918
				224	740,074 – 740,189	+	3	119	88.00	-1.79	0.92	0.848553
				225	740,074 – 740,189	-	3	119	88.00	-2.23	0.82	0.776114
				226	740,113 – 740,227	+	3	118	84.16	-1.48	0.88	0.727006
140	3R_DroMel_CAF1	742,558 – 742,781	- - - - - - - - -	227	742,558 – 742,673	+	4	115	86.52	-1.76	0.78	0.767158
				228	742,558 – 742,673	-	4	115	86.52	-1.57	0.75	0.630295
				229	742,633 – 742,750	+	4	117	86.50	-2.19	0.81	0.938346
				230	742,673 – 742,781	+	5	114	73.65	-1.78	0.53	0.751142
141	3R_DroMel_CAF1	744,774 – 744,874	- - - - - - - - -	231	744,774 – 744,874	+	4	100	88.00	-1.95	0.73	0.783421
142	3R_DroMel_CAF1	751,602 – 751,717	- - - "knownCDS=texon11222;Parent=CG_NCBI_GNO_32022317, CG_BATZ_CON_47008368" - - - - -	232	751,602 – 751,717	-	6	120	91.17	-1.27	0.92	0.748311
143	3R_DroMel_CAF1	753,281 – 753,374	- - - "knownCDS=texon11225;Parent=CG_RGUI_GID_mRNA_40007182, CG_DGIL_SNO_28363250, CG_BATZ_CON_47008368" - - - - -	233	753,281 – 753,374	-	6	96	70.64	-1.92	0.52	0.946367
144	3R_DroMel_CAF1	758,306 – 758,396	- - - - - - - - -	234	758,306 – 758,396	+	5	116	69.61	-1.83	0.52	0.883503
145	3R_DroMel_CAF1	760,529 – 760,683	- - - "knownCDS=texon11226;Parent=CG_RGUI_GID_mRNA_40007182, CG_DGIL_SNO_28363250" - - - - -	235	760,529 – 760,649	+	6	120	78.67	-1.63	0.57	0.561208
				236	760,529 – 760,649	-	6	120	78.67	-1.57	0.67	0.792984
				237	760,569 – 760,683	-	6	114	81.05	-1.36	0.71	0.608414
146	3R_DroMel_CAF1	762,360 – 762,466	- - "RNAmicro=f:762360_t:762474_strand:+_p:0.881873" "knownCDS=texon11226;Parent=CG_RGUI_GID_mRNA_40007182, CG_DGIL_SNO_28363250" - - - - -	238	762,360 – 762,466	-	6	115	77.54	-2.01	0.75	0.963325
147	3R_DroMel_CAF1	762,978 – 763,095	- - - "knownCDS=texon11226;Parent=CG_RGUI_GID_mRNA_40007182, CG_DGIL_SNO_28363250" - - - - -	239	762,978 – 763,095	+	6	117	76.63	-1.90	0.61	0.918585
148	3R_DroMel_CAF1	773,642 – 773,790	"known=U1_snRNA ID=Dmel\CG_RFAM_INF_49002301;Rfam ID=U1;Rfam_accession=RF00003;" - - - "Rfam=AY187768.1/1130-1295_RF00003;U1;\|1e-59" "Noncode=n368,u348,AE003604,U1,Drosophila_melanogaster_(fruit_fly)\|7e-81" - - "Flybase=FBgn0004183:small_nuclear_RNA_U1_at_82Eb:nuclear_snRNA_gene\|7e-82"	240	773,642 – 773,750	+	6	120	92.62	-1.45	0.93	0.938475
				241	773,642 – 773,750	-	6	120	92.62	-1.15	0.95	0.851952
				242	773,670 – 773,790	+	6	120	97.56	-0.93	0.93	0.627082
149	3R_DroMel_CAF1	775,537 – 775,660	- - - - - - - - -	243	775,537 – 775,628	+	6	96	81.86	-1.48	0.70	0.595094
149	3R_DroMel_CAF1	775,537 – 775,660	- - - - - - - - -	244	775,557 – 775,660	+	6	105	80.32	-3.64	0.69	0.973134
150	3R_DroMel_CAF1	780,354 – 780,453	- - - - - - - - -	245	780,354 – 780,453	+	5	99	92.70	-2.47	0.80	0.985040
151	3R_DroMel_CAF1	783,738 – 783,831	- - - - - - - - -	246	783,738 – 783,831	+	5	99	73.20	-1.92	0.48	0.861478
151	3R_DroMel_CAF1	783,738 – 783,831	- - - - - - - - -	247	783,738 – 783,831	-	5	99	73.20	-1.96	0.40	0.873885
152	3R_DroMel_CAF1	789,128 – 789,226	- - - - - - - - -	248	789,128 – 789,226	+	6	106	77.28	-2.56	0.50	0.960088
153	3R_DroMel_CAF1	796,283 – 796,436	- - - - - - - - -	249	796,283 – 796,397	-	3	114	84.68	-2.51	0.69	0.831210
153	3R_DroMel_CAF1	796,283 – 796,436	- - - - - - - - -	250	796,323 – 796,436	-	4	120	71.84	-1.77	0.52	0.591869
154	3R_DroMel_CAF1	796,508 – 796,625	- - - - - - - - -	251	796,508 – 796,625	+	4	120	73.24	-1.52	0.62	0.561111
155	3R_DroMel_CAF1	799,043 – 799,154	- - - - - - - - -	252	799,043 – 799,154	+	4	120	64.60	-1.83	0.48	0.894746
156	3R_DroMel_CAF1	799,476 – 799,796	- - - - - - - - -	253	799,476 – 799,596	-	4	120	89.89	-1.94	0.75	0.737770
				254	799,596 – 799,716	+	4	120	97.78	-2.69	0.96	0.964799
				255	799,596 – 799,716	-	4	120	97.78	-1.67	0.92	0.542925
				256	799,636 – 799,756	-	4	120	97.36	-2.08	0.89	0.782471
				257	799,676 – 799,796	-	4	120	95.39	-1.81	0.86	0.691608
157	3R_DroMel_CAF1	800,249 – 800,409	- - - - - - - - -	258	800,249 – 800,369	+	4	120	77.90	-2.08	0.81	0.979343
				259	800,249 – 800,369	-	4	120	77.90	-2.59	0.87	0.998353
				260	800,289 – 800,409	+	4	120	93.89	-1.50	0.84	0.511716
				261	800,289 – 800,409	-	4	120	93.89	-1.94	0.85	0.820522
158	3R_DroMel_CAF1	802,897 – 803,006	- - - - - - - - -	262	802,897 – 803,006	-	4	120	88.92	-1.49	0.79	0.589222
159	3R_DroMel_CAF1	803,214 – 803,334	- - - - - - - - -	263	803,214 – 803,334	+	3	120	77.27	-2.04	0.64	0.938065
159	3R_DroMel_CAF1	803,214 – 803,334	- - - - - - - - -	264	803,214 – 803,334	-	3	120	77.27	-1.65	0.63	0.644755
160	3R_DroMel_CAF1	808,853 – 808,946	- - - "knownCDS=Parent=FBtr0078846;Name=CG14662-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14662-RA" - - - - -	265	808,853 – 808,946	+	4	120	66.37	-1.95	0.45	0.810586
161	3R_DroMel_CAF1	812,528 – 812,623	- - - "knownCDS=Parent=FBtr0078845;Name=CG2022-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2022-RA" - - - - -	266	812,528 – 812,623	-	6	104	82.82	-1.37	0.78	0.525707
162	3R_DroMel_CAF1	818,835 – 818,995	- - - - - - - - -	267	818,835 – 818,955	+	3	120	74.44	-1.88	0.59	0.874070
				268	818,835 – 818,955	-	3	120	74.44	-1.53	0.74	0.939511
				269	818,875 – 818,995	+	3	120	86.39	-2.39	0.67	0.635783
				270	818,875 – 818,995	-	3	120	86.39	-2.48	0.81	0.887588
163	3R_DroMel_CAF1	821,186 – 821,294	- - - - - - - - -	271	821,186 – 821,294	-	5	120	88.65	-1.98	0.70	0.604916
164	3R_DroMel_CAF1	822,521 – 822,760	- - - - - - - - -	272	822,521 – 822,641	-	5	120	96.25	-1.66	0.92	0.976561
164	3R_DroMel_CAF1	822,521 – 822,760	- - - - - - - - -	273	822,641 – 822,760	+	5	120	76.55	-1.92	0.56	0.817421
165	3R_DroMel_CAF1	823,079 – 823,174	- - - - - - - - -	274	823,079 – 823,174	-	4	101	72.00	-2.02	0.69	0.993228
166	3R_DroMel_CAF1	823,523 – 823,643	- - - - - - - - -	275	823,523 – 823,643	+	5	120	93.49	-2.13	0.91	0.998666
166	3R_DroMel_CAF1	823,523 – 823,643	- - - - - - - - -	276	823,523 – 823,643	-	5	120	93.49	-3.34	0.80	0.997034
167	3R_DroMel_CAF1	824,355 – 824,508	- - - - - - - - -	277	824,355 – 824,468	+	5	120	89.86	-1.48	0.77	0.536811
167	3R_DroMel_CAF1	824,355 – 824,508	- - - - - - - - -	278	824,389 – 824,508	-	5	120	92.83	-1.95	0.76	0.750342
168	3R_DroMel_CAF1	824,916 – 825,076	- - - - - - - - -	279	824,916 – 825,036	+	5	120	89.58	-3.14	0.82	0.998547
				280	824,956 – 825,076	+	5	120	88.50	-2.52	0.69	0.783979
				281	824,956 – 825,076	-	5	120	88.50	-2.94	0.71	0.946484
169	3R_DroMel_CAF1	825,582 – 825,696	- - - - - - - - -	282	825,582 – 825,696	+	5	120	87.30	-2.27	0.80	0.964836
170	3R_DroMel_CAF1	826,168 – 826,281	- - - - - - - - -	283	826,168 – 826,281	+	5	120	82.36	-2.22	0.69	0.908248
170	3R_DroMel_CAF1	826,168 – 826,281	- - - - - - - - -	284	826,168 – 826,281	-	5	120	82.36	-1.69	0.67	0.576689
171	3R_DroMel_CAF1	827,328 – 827,437	- - - - - - - - -	285	827,328 – 827,437	-	4	120	83.02	-2.26	0.81	0.963286
172	3R_DroMel_CAF1	835,109 – 835,218	- - - - - - - - -	286	835,109 – 835,218	+	5	120	80.65	-1.78	0.67	0.717964
173	3R_DroMel_CAF1	836,067 – 836,158	- - - - - - - - -	287	836,067 – 836,158	-	3	91	78.46	-2.02	0.82	0.983310
174	3R_DroMel_CAF1	836,253 – 836,366	- - - - - - - - -	288	836,253 – 836,366	+	4	113	96.46	-1.99	0.91	0.843867
175	3R_DroMel_CAF1	836,953 – 837,142	- - - - - - - - -	289	836,953 – 837,072	+	5	120	79.65	-1.24	0.81	0.512809
				290	836,993 – 837,110	+	4	119	96.19	-1.52	0.93	0.585221
				291	837,032 – 837,142	+	4	120	87.68	-2.15	0.76	0.882768
				292	837,032 – 837,142	-	4	120	87.68	-1.90	0.73	0.767009
176	3R_DroMel_CAF1	837,977 – 838,128	- - - - - - - - -	293	837,977 – 838,093	+	4	120	96.22	-1.68	0.92	0.704245
				294	837,977 – 838,093	-	4	120	96.22	-1.48	0.92	0.521232
				295	838,017 – 838,128	+	4	120	90.41	-2.65	0.82	0.969900
				296	838,017 – 838,128	-	4	120	90.41	-2.26	0.89	0.976015
177	3R_DroMel_CAF1	838,393 – 838,511	- - - - - - - - -	297	838,393 – 838,511	-	3	120	94.44	-2.08	0.84	0.571954
178	3R_DroMel_CAF1	838,737 – 838,856	- - - - - - - - -	298	838,737 – 838,856	-	4	120	82.40	-1.65	0.72	0.652343
179	3R_DroMel_CAF1	839,676 – 839,788	- - - - - - - - -	299	839,676 – 839,788	-	4	120	90.74	-1.40	0.91	0.649833
180	3R_DroMel_CAF1	841,327 – 841,422	- - - - - - - - -	300	841,327 – 841,422	-	4	120	82.95	-1.84	0.67	0.727955
181	3R_DroMel_CAF1	842,453 – 842,557	- - - - - - - - -	301	842,453 – 842,557	+	4	120	87.95	-2.61	0.80	0.970336
182	3R_DroMel_CAF1	842,939 – 843,038	- - - - - - - - -	302	842,939 – 843,038	+	4	120	89.50	-2.79	0.92	0.996139
183	3R_DroMel_CAF1	843,309 – 843,668	- - - - - - - - -	303	843,309 – 843,429	-	4	120	88.75	-1.37	0.89	0.588221
				304	843,389 – 843,509	+	4	120	94.86	-2.42	0.88	0.945983
				305	843,389 – 843,509	-	4	120	94.86	-1.39	0.92	0.516041
				306	843,429 – 843,549	-	4	120	92.78	-1.43	0.84	0.500000
				307	843,549 – 843,668	-	4	120	77.92	-1.92	0.72	0.921249
184	3R_DroMel_CAF1	844,475 – 844,590	- - - - - - - - -	308	844,475 – 844,590	+	4	120	88.10	-1.82	0.94	0.939688
185	3R_DroMel_CAF1	844,630 – 844,750	- - - - - - - - -	309	844,630 – 844,750	+	4	120	92.92	-2.77	0.83	0.958029
185	3R_DroMel_CAF1	844,630 – 844,750	- - - - - - - - -	310	844,630 – 844,750	-	4	120	92.92	-1.71	0.79	0.582034
186	3R_DroMel_CAF1	844,830 – 844,966	- - - - - - - - -	311	844,830 – 844,926	+	4	120	86.15	-2.35	0.81	0.958781
				312	844,830 – 844,926	-	4	120	86.15	-2.06	0.82	0.917693
				313	844,870 – 844,966	-	4	120	87.06	-2.03	0.76	0.858222
187	3R_DroMel_CAF1	846,193 – 846,306	- - - - - - - - -	314	846,193 – 846,306	+	3	120	84.72	0.32	1.00	0.599520
188	3R_DroMel_CAF1	847,621 – 847,837	- - - - - - - - -	315	847,621 – 847,739	-	4	120	84.31	-1.48	0.74	0.548082
				316	847,661 – 847,773	+	4	120	87.22	-2.15	0.71	0.825547
				317	847,661 – 847,773	-	4	120	87.22	-2.05	0.84	0.924223
				318	847,739 – 847,837	-	4	120	85.20	-1.86	0.79	0.825803
189	3R_DroMel_CAF1	848,068 – 848,184	- - - - - - - - -	319	848,068 – 848,184	-	4	120	82.63	-2.22	0.55	0.577018
190	3R_DroMel_CAF1	849,187 – 849,387	- - - - - - - - -	320	849,187 – 849,307	-	4	120	97.50	-1.82	0.91	0.664153
190	3R_DroMel_CAF1	849,187 – 849,387	- - - - - - - - -	321	849,267 – 849,387	-	4	120	95.42	-1.65	0.93	0.754663
191	3R_DroMel_CAF1	849,617 – 849,777	- - - - - - - - -	322	849,617 – 849,737	+	4	120	83.19	-1.55	0.71	0.571660
				323	849,657 – 849,777	+	4	120	94.07	-1.76	0.85	0.725157
				324	849,657 – 849,777	-	4	120	94.07	-1.62	0.82	0.536092
192	3R_DroMel_CAF1	849,896 – 850,200	- - - - - - - - -	325	849,896 – 850,016	+	4	120	95.83	-1.62	0.92	0.676426
				326	849,936 – 850,046	+	4	120	85.11	-3.39	0.67	0.978638
				327	849,936 – 850,046	-	4	120	85.11	-2.14	0.77	0.915894
				328	850,016 – 850,120	+	4	120	82.56	-1.82	0.66	0.703037
				329	850,046 – 850,160	+	4	120	94.87	-3.08	0.88	0.975137
				330	850,046 – 850,160	-	4	120	94.87	-2.42	0.97	0.988845
				331	850,080 – 850,200	+	4	120	94.37	-2.50	0.93	0.986025
				332	850,080 – 850,200	-	4	120	94.37	-3.44	0.90	0.988365
193	3R_DroMel_CAF1	851,050 – 851,163	- - - - - - - - -	333	851,050 – 851,163	+	4	120	84.41	-2.66	0.77	0.982805
193	3R_DroMel_CAF1	851,050 – 851,163	- - - - - - - - -	334	851,050 – 851,163	-	4	120	84.41	-1.68	0.83	0.746082
194	3R_DroMel_CAF1	854,776 – 854,896	- - - - - - - - -	335	854,776 – 854,896	+	4	120	91.39	-2.15	0.80	0.863577
194	3R_DroMel_CAF1	854,776 – 854,896	- - - - - - - - -	336	854,776 – 854,896	-	4	120	91.39	-1.55	0.79	0.551797
195	3R_DroMel_CAF1	855,544 – 855,652	- - - - - - - - -	337	855,544 – 855,652	+	3	120	71.84	-1.49	0.63	0.827517
196	3R_DroMel_CAF1	856,161 – 856,278	- - - - - - - - -	338	856,161 – 856,278	+	4	120	94.84	-3.01	0.88	0.975300
196	3R_DroMel_CAF1	856,161 – 856,278	- - - - - - - - -	339	856,161 – 856,278	-	4	120	94.84	-2.53	0.81	0.829139
197	3R_DroMel_CAF1	856,891 – 857,003	- - - - - - - - -	340	856,891 – 857,003	+	4	120	92.19	-2.18	0.72	0.542699
197	3R_DroMel_CAF1	856,891 – 857,003	- - - - - - - - -	341	856,891 – 857,003	-	4	120	92.19	-2.95	0.82	0.962945
198	3R_DroMel_CAF1	859,281 – 859,401	- - - - - - - - -	342	859,281 – 859,401	+	4	120	85.71	-2.00	0.73	0.835930
199	3R_DroMel_CAF1	859,815 – 860,095	- - - - - - - - -	343	859,815 – 859,935	-	4	120	93.61	-1.71	0.89	0.798787
				344	859,855 – 859,975	-	4	120	95.42	-1.96	0.90	0.866192
				345	859,895 – 860,015	+	3	120	94.96	-2.26	0.87	0.775092
				346	859,975 – 860,095	-	3	120	88.44	-2.14	0.82	0.718069
200	3R_DroMel_CAF1	861,352 – 861,472	- - - - - - - - -	347	861,352 – 861,472	+	4	120	98.33	-1.82	0.96	0.693505
201	3R_DroMel_CAF1	861,681 – 861,961	- - - - - - - - -	348	861,681 – 861,801	+	4	120	83.47	-2.03	0.61	0.667146
				349	861,681 – 861,801	-	4	120	83.47	-3.21	0.71	0.994672
				350	861,721 – 861,841	+	4	120	92.50	-2.00	0.90	0.940414
				351	861,721 – 861,841	-	4	120	92.50	-2.47	0.85	0.959658
				352	861,841 – 861,961	+	4	120	90.90	-1.81	0.81	0.780922
202	3R_DroMel_CAF1	866,645 – 866,804	- - - - - - - - -	353	866,645 – 866,764	+	4	120	95.42	-1.87	0.81	0.517525
202	3R_DroMel_CAF1	866,645 – 866,804	- - - - - - - - -	354	866,685 – 866,804	-	4	120	94.17	-2.26	0.75	0.538641
203	3R_DroMel_CAF1	867,842 – 868,002	- - - - - - - - -	355	867,842 – 867,962	-	4	120	95.56	-2.64	0.94	0.985390
203	3R_DroMel_CAF1	867,842 – 868,002	- - - - - - - - -	356	867,882 – 868,002	-	4	120	95.14	-1.59	0.89	0.612377
204	3R_DroMel_CAF1	868,533 – 868,653	- - - - - - - - -	357	868,533 – 868,653	+	4	120	98.47	-2.15	0.94	0.827259
204	3R_DroMel_CAF1	868,533 – 868,653	- - - - - - - - -	358	868,533 – 868,653	-	4	120	98.47	-2.27	0.93	0.840743
205	3R_DroMel_CAF1	868,732 – 868,966	- - - - - - - - -	359	868,732 – 868,851	-	4	120	96.09	-1.82	0.94	0.844543
205	3R_DroMel_CAF1	868,732 – 868,966	- - - - - - - - -	360	868,851 – 868,966	-	4	120	96.17	-1.74	0.97	0.833371
206	3R_DroMel_CAF1	868,989 – 869,109	- - - - - - - - -	361	868,989 – 869,109	-	4	120	88.45	-3.82	0.73	0.958475
207	3R_DroMel_CAF1	869,229 – 869,653	- - - - - - - - -	362	869,229 – 869,349	+	4	120	89.99	-1.48	0.88	0.671118
				363	869,229 – 869,349	-	4	120	89.99	-1.48	0.83	0.602241
				364	869,349 – 869,463	-	4	120	91.11	-1.43	0.93	0.719251
				365	869,463 – 869,583	+	4	120	93.33	-2.00	0.79	0.700813
				366	869,503 – 869,619	+	4	120	95.34	-2.88	0.99	0.995236
				367	869,503 – 869,619	-	4	120	95.34	-3.53	0.96	0.993281
				368	869,543 – 869,653	-	4	120	90.00	-1.71	0.79	0.720295
208	3R_DroMel_CAF1	869,772 – 869,892	- - - - - - - - -	369	869,772 – 869,892	-	4	120	94.86	-1.57	0.88	0.600351
209	3R_DroMel_CAF1	870,052 – 870,172	- - - - - - - - -	370	870,052 – 870,172	+	4	120	90.83	-1.74	0.82	0.760290
210	3R_DroMel_CAF1	870,520 – 870,753	- - - - - - - - -	371	870,520 – 870,638	+	4	120	85.01	-2.78	0.74	0.980127
				372	870,520 – 870,638	-	4	120	85.01	-2.18	0.69	0.860587
				373	870,560 – 870,676	+	4	120	78.95	-2.86	0.61	0.994585
				374	870,560 – 870,676	-	4	120	78.95	-2.31	0.66	0.971542
				375	870,638 – 870,753	+	4	120	85.53	-1.70	0.75	0.712565
211	3R_DroMel_CAF1	871,212 – 871,332	- - - - - - - - -	376	871,212 – 871,332	-	4	120	96.25	-2.65	0.95	0.981568
212	3R_DroMel_CAF1	879,265 – 879,418	- - - - - - - - -	377	879,265 – 879,379	+	4	120	80.69	-2.12	0.70	0.926944
212	3R_DroMel_CAF1	879,265 – 879,418	- - - - - - - - -	378	879,305 – 879,418	+	4	120	90.84	-1.66	0.78	0.625072
213	3R_DroMel_CAF1	879,771 – 879,926	- - - - - - - - -	379	879,771 – 879,886	-	4	120	88.09	-1.59	0.78	0.660067
213	3R_DroMel_CAF1	879,771 – 879,926	- - - - - - - - -	380	879,806 – 879,926	+	4	120	85.29	-1.57	0.66	0.531852
214	3R_DroMel_CAF1	880,445 – 880,596	- - - - - - - - -	381	880,445 – 880,565	+	4	120	86.93	-1.95	0.82	0.886398
214	3R_DroMel_CAF1	880,445 – 880,596	- - - - - - - - -	382	880,485 – 880,596	-	4	120	88.87	-1.43	0.87	0.619237
215	3R_DroMel_CAF1	881,536 – 881,748	- - "RNAmicro=f:881576_t:881667_strand:+_p:0.563233" - - - - - -	383	881,536 – 881,631	-	4	120	80.78	-1.54	0.69	0.518196
				384	881,576 – 881,668	+	3	92	96.01	-4.37	0.93	0.971989
				385	881,576 – 881,668	-	3	92	96.01	-3.01	0.96	0.985418
				386	881,598 – 881,708	+	4	120	89.42	-2.62	0.80	0.960322
				387	881,598 – 881,708	-	4	120	89.42	-2.16	0.87	0.956852
				388	881,631 – 881,748	-	4	120	95.50	-1.67	0.88	0.653327
216	3R_DroMel_CAF1	881,908 – 882,028	- - - - - - - - -	389	881,908 – 882,028	+	3	120	99.44	-1.39	1.00	0.573331
217	3R_DroMel_CAF1	882,291 – 882,404	- - - - - - - - -	390	882,291 – 882,404	-	3	120	92.78	-1.99	0.94	0.869916
218	3R_DroMel_CAF1	883,168 – 883,288	- - - - - - - - -	391	883,168 – 883,288	-	3	120	93.31	-2.01	0.83	0.546600
219	3R_DroMel_CAF1	884,223 – 884,606	- - - - - - - - -	392	884,223 – 884,343	+	3	120	96.10	-1.91	0.90	0.654417
				393	884,263 – 884,371	+	3	120	89.69	-3.14	0.77	0.879262
				394	884,371 – 884,486	+	3	120	93.89	-1.76	0.96	0.798250
				395	884,451 – 884,566	-	3	120	95.00	-2.27	0.97	0.957735
				396	884,486 – 884,606	+	3	120	97.77	-3.16	1.02	0.995138
				397	884,486 – 884,606	-	3	120	97.77	-3.41	0.93	0.977507
220	3R_DroMel_CAF1	885,184 – 885,300	- - - - - - - - -	398	885,184 – 885,300	+	3	120	97.78	-2.03	1.00	0.924488
221	3R_DroMel_CAF1	885,540 – 885,687	- - - - - - - - -	399	885,540 – 885,660	-	3	120	85.22	-2.64	0.67	0.824084
221	3R_DroMel_CAF1	885,540 – 885,687	- - - - - - - - -	400	885,580 – 885,687	-	3	120	79.42	-2.27	0.64	0.932209
222	3R_DroMel_CAF1	888,642 – 888,744	- - - - - - - - -	401	888,642 – 888,744	-	3	107	77.92	-1.57	0.64	0.573806
223	3R_DroMel_CAF1	888,820 – 888,956	- - - - - - - - -	402	888,820 – 888,922	-	3	103	74.07	-3.15	0.61	0.999919
				403	888,860 – 888,956	+	3	97	86.62	-1.75	0.81	0.551029
				404	888,860 – 888,956	-	3	97	86.62	-1.07	0.93	0.548625
224	3R_DroMel_CAF1	904,443 – 904,551	- - - - - - - - -	405	904,443 – 904,551	+	4	109	79.04	-2.55	0.56	0.950675
225	3R_DroMel_CAF1	907,683 – 907,784	- - - - - - - - -	406	907,683 – 907,784	+	3	101	90.10	-1.93	0.86	0.661383
226	3R_DroMel_CAF1	910,119 – 910,224	- - - "knownCDS=Parent=FBtr0078844;Name=corto-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2530-RA" - - - - -	407	910,119 – 910,224	-	6	114	74.19	-2.33	0.50	0.976486
227	3R_DroMel_CAF1	910,718 – 910,811	- - - "knownCDS=Parent=FBtr0078844;Name=corto-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2530-RA" - - - - -	408	910,718 – 910,811	+	3	108	82.52	-2.58	0.84	0.979143
227	3R_DroMel_CAF1	910,718 – 910,811		409	910,718 – 910,811	-	3	108	82.52	-2.15	0.78	0.892280
228	3R_DroMel_CAF1	916,528 – 916,625	- - - - - - - - -	410	916,528 – 916,625	-	5	107	75.42	-1.89	0.48	0.749303
229	3R_DroMel_CAF1	923,423 – 923,529	- - - - - - - - -	411	923,423 – 923,529	+	5	120	72.37	-1.67	0.17	0.713070
229	3R_DroMel_CAF1	923,423 – 923,529	- - - - - - - - -	412	923,423 – 923,529	-	5	120	72.37	-2.09	0.22	0.953294
230	3R_DroMel_CAF1	923,659 – 923,761	- - - - - - - - -	413	923,659 – 923,761	+	5	120	74.27	-2.09	0.60	0.973036
231	3R_DroMel_CAF1	924,437 – 924,546	- - - - - - - - -	414	924,437 – 924,546	+	6	120	76.16	-2.24	0.62	0.976652
231	3R_DroMel_CAF1	924,437 – 924,546	- - - - - - - - -	415	924,437 – 924,546	-	6	120	76.16	-2.56	0.53	0.983110
232	3R_DroMel_CAF1	924,837 – 924,936	- - - - - - - - -	416	924,837 – 924,936	+	6	99	86.51	-2.86	0.82	0.926037
232	3R_DroMel_CAF1	924,837 – 924,936	- - - - - - - - -	417	924,837 – 924,936	-	6	99	86.51	-2.23	0.75	0.500000
233	3R_DroMel_CAF1	926,318 – 926,469	- - - - - - - - -	418	926,318 – 926,437	+	6	120	82.80	-3.12	0.72	0.899123
233	3R_DroMel_CAF1	926,318 – 926,469	- - - - - - - - -	419	926,358 – 926,469	+	6	112	88.50	-2.69	0.78	0.708657
234	3R_DroMel_CAF1	927,786 – 927,879	- - - - - - - - -	420	927,786 – 927,879	-	6	100	75.68	-2.51	0.31	0.749232
235	3R_DroMel_CAF1	931,568 – 931,742	- - - - - - - - -	421	931,568 – 931,668	+	4	112	71.72	-1.98	0.54	0.916085
				422	931,600 – 931,703	+	4	119	70.35	-2.41	0.57	0.998007
				423	931,630 – 931,742	+	3	116	87.07	-2.37	0.70	0.653087
236	3R_DroMel_CAF1	932,901 – 932,994	- - - - - - - - -	424	932,901 – 932,994	+	5	98	80.19	-2.07	0.60	0.837668
237	3R_DroMel_CAF1	939,389 – 939,509	- - - - - - - - -	425	939,389 – 939,509	-	3	120	83.95	-1.63	0.74	0.500000
238	3R_DroMel_CAF1	940,520 – 940,633	- - - - - - - - -	426	940,520 – 940,633	-	5	113	89.73	-2.07	0.76	0.871867
239	3R_DroMel_CAF1	946,051 – 946,163	- - - - - - - - -	427	946,051 – 946,163	-	5	114	84.87	-1.70	0.69	0.570550
240	3R_DroMel_CAF1	946,202 – 946,301	- - - - - - - - -	428	946,202 – 946,301	+	4	113	83.01	-1.77	0.65	0.631925
241	3R_DroMel_CAF1	947,044 – 947,150	- - - - - - - - -	429	947,044 – 947,150	-	6	120	77.81	-2.11	0.43	0.500000
242	3R_DroMel_CAF1	948,596 – 948,698	- - - - - - - - -	430	948,596 – 948,698	+	6	111	79.97	-1.36	0.66	0.575930
243	3R_DroMel_CAF1	949,861 – 949,956	- - - - - - - - -	431	949,861 – 949,956	-	6	119	72.40	-1.77	0.47	0.697755
244	3R_DroMel_CAF1	949,998 – 950,102	- - - - - - - - -	432	949,998 – 950,102	-	4	104	79.19	-2.55	0.61	0.979108
245	3R_DroMel_CAF1	956,202 – 956,298	- - - - - - - - -	433	956,202 – 956,298	-	6	120	76.92	-1.13	0.69	0.654406
246	3R_DroMel_CAF1	959,018 – 959,110	- - - - - - - - -	434	959,018 – 959,110	+	5	92	90.63	-1.37	0.84	0.645193
247	3R_DroMel_CAF1	963,009 – 963,102	- - - "knownCDS=Parent=FBtr0078843;Name=CG12589-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12589-RA" - - - - -	435	963,009 – 963,102	+	6	96	74.68	-1.24	0.64	0.663020
248	3R_DroMel_CAF1	967,411 – 967,547	- - - - - - - - -	436	967,411 – 967,507	+	3	96	93.68	-1.48	0.94	0.515972
248	3R_DroMel_CAF1	967,411 – 967,547	- - - - - - - - -	437	967,447 – 967,547	+	3	100	83.04	-1.34	0.84	0.543831
249	3R_DroMel_CAF1	971,265 – 971,370	- - - - - - - - -	438	971,265 – 971,370	+	3	105	87.86	-3.07	0.83	0.954313
250	3R_DroMel_CAF1	973,757 – 973,848	- - - - - - - - -	439	973,757 – 973,848	+	6	99	71.12	-2.41	0.28	0.894859
251	3R_DroMel_CAF1	979,201 – 979,299	- - - - - - - - -	440	979,201 – 979,299	+	6	113	76.89	-1.96	0.65	0.949146
252	3R_DroMel_CAF1	982,496 – 982,593	- - - - - - - - -	441	982,496 – 982,593	+	3	97	91.64	-2.33	0.85	0.800381
253	3R_DroMel_CAF1	986,697 – 986,790	- - - - - - - - -	442	986,697 – 986,790	+	5	117	81.74	-2.64	0.45	0.844153
254	3R_DroMel_CAF1	992,020 – 992,128	- - - "knownCDS=Parent=FBtr0078772;Name=dpr16-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12591-RA" - - - - -	443	992,020 – 992,128	+	6	111	76.42	-2.22	0.61	0.971155
255	3R_DroMel_CAF1	992,900 – 993,006	- - - "knownCDS=Parent=FBtr0078772;Name=dpr16-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12591-RA" - - - - -	444	992,900 – 993,006	+	6	115	75.66	-1.33	0.60	0.518796
256	3R_DroMel_CAF1	996,406 – 996,500	- - - - - - - - -	445	996,406 – 996,500	-	6	97	78.97	-1.07	0.72	0.576543
257	3R_DroMel_CAF1	996,622 – 996,727	- - - - - - - - -	446	996,622 – 996,727	+	6	105	82.06	-1.86	0.70	0.715444
257	3R_DroMel_CAF1	996,622 – 996,727	- - - - - - - - -	447	996,622 – 996,727	-	6	105	82.06	-1.88	0.73	0.757399
258	3R_DroMel_CAF1	996,752 – 996,846	- - "RNAmicro=f:996752_t:996851_strand:-_p:0.634655" - - - - - -	448	996,752 – 996,846	+	6	100	82.08	-1.47	0.71	0.575916
258	3R_DroMel_CAF1	996,752 – 996,846		449	996,752 – 996,846	-	6	100	82.08	-2.47	0.66	0.818503
259	3R_DroMel_CAF1	1,010,439 – 1,010,533	- - - - - - - - -	450	1,010,439 – 1,010,533	-	6	98	86.15	-2.25	0.80	0.714824
260	3R_DroMel_CAF1	1,020,714 – 1,020,926	- - - - - - - - -	451	1,020,714 – 1,020,809	+	6	113	74.00	-1.30	0.79	0.949268
				452	1,020,714 – 1,020,809	-	6	113	74.00	-3.27	0.90	0.968558
				453	1,020,744 – 1,020,847	-	6	120	76.11	-1.97	0.56	0.897038
				454	1,020,809 – 1,020,926	-	6	120	79.51	-1.56	0.63	0.652087
261	3R_DroMel_CAF1	1,026,053 – 1,026,150	- - - - - - - - -	455	1,026,053 – 1,026,150	-	5	103	70.87	-1.73	0.42	0.615123
262	3R_DroMel_CAF1	1,027,639 – 1,027,755	- - - - - - - - -	456	1,027,639 – 1,027,755	-	4	118	80.23	-1.84	0.65	0.726441
263	3R_DroMel_CAF1	1,032,807 – 1,032,903	- - - - - - - - -	457	1,032,807 – 1,032,903	+	3	96	83.62	-1.98	0.82	0.835324
264	3R_DroMel_CAF1	1,040,544 – 1,040,664	- - - - - - - - -	458	1,040,544 – 1,040,664	-	3	120	84.44	-1.56	0.85	0.654187
265	3R_DroMel_CAF1	1,043,785 – 1,043,985	- - - "knownCDS=Parent=FBtr0078831;Name=CG12161-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12161-RA" - - - - -	459	1,043,785 – 1,043,905	+	5	120	79.65	-2.07	0.56	0.806556
265	3R_DroMel_CAF1	1,043,785 – 1,043,985		460	1,043,865 – 1,043,985	+	5	120	80.17	-1.84	0.67	0.783238
266	3R_DroMel_CAF1	1,047,498 – 1,047,698	- - - - - - - - -	461	1,047,498 – 1,047,618	+	4	120	88.33	-1.62	0.72	0.598938
266	3R_DroMel_CAF1	1,047,498 – 1,047,698	- - - - - - - - -	462	1,047,578 – 1,047,698	-	5	120	94.67	-1.14	0.90	0.565543
267	3R_DroMel_CAF1	1,048,618 – 1,048,778	- - - "knownCDS=Parent=FBtr0078830;Name=CG2604-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2604-RB" - - - - -	463	1,048,618 – 1,048,738	+	5	120	95.17	-1.12	0.93	0.594439
				464	1,048,618 – 1,048,738	-	5	120	95.17	-1.96	0.91	0.996533
				465	1,048,658 – 1,048,778	-	5	120	94.33	-1.72	0.92	0.989533
268	3R_DroMel_CAF1	1,057,910 – 1,058,027	- - - - - - - - -	466	1,057,910 – 1,058,027	-	5	118	87.47	-1.77	0.69	0.516619
269	3R_DroMel_CAF1	1,058,487 – 1,058,599	- - - "knownCDS=Parent=FBtr0078778;Name=Mms19-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12005-RB" - - - - -	467	1,058,487 – 1,058,599	+	6	116	80.35	-1.67	0.66	0.726150
270	3R_DroMel_CAF1	1,061,890 – 1,061,983	- - - - - - - - -	468	1,061,890 – 1,061,983	-	4	93	88.71	-2.40	0.90	0.985700
271	3R_DroMel_CAF1	1,064,279 – 1,064,399	- - - "knownCDS=Parent=FBtr0078822, FBtr0078823;Name=CG12163-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12163-RB, FlyBase+Annotation+IDs:CG12163-RA" - - - - -	469	1,064,279 – 1,064,399	-	6	120	81.17	-2.08	0.60	0.720156
272	3R_DroMel_CAF1	1,066,119 – 1,066,221	- - - "knownCDS=Parent=FBtr0078824;Name=CG33293-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33293-RA" - - - - -	470	1,066,119 – 1,066,221	+	6	106	79.10	-1.78	0.63	0.804657
273	3R_DroMel_CAF1	1,069,848 – 1,069,959	- - - "knownCDS=Parent=FBtr0078823;Name=CG12163-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12163-RA" - - - - -	471	1,069,848 – 1,069,959	+	6	120	75.34	-1.81	0.49	0.648203
274	3R_DroMel_CAF1	1,070,219 – 1,070,330	- - - - - - - - -	472	1,070,219 – 1,070,330	-	3	111	77.27	-1.16	0.78	0.560728
275	3R_DroMel_CAF1	1,072,232 – 1,072,388	- - - - - - - - -	473	1,072,232 – 1,072,348	+	4	116	86.76	-1.48	0.73	0.567488
				474	1,072,232 – 1,072,348	-	4	116	86.76	-1.60	0.81	0.682978
				475	1,072,270 – 1,072,388	+	5	118	90.59	-1.38	0.90	0.805033
276	3R_DroMel_CAF1	1,074,121 – 1,074,250	- - - - - - - - -	476	1,074,121 – 1,074,213	-	6	97	82.03	-2.47	0.58	0.708299
276	3R_DroMel_CAF1	1,074,121 – 1,074,250	- - - - - - - - -	477	1,074,148 – 1,074,250	+	5	105	74.05	-1.86	0.41	0.741237
277	3R_DroMel_CAF1	1,076,256 – 1,076,355	- - - - - - - - -	478	1,076,256 – 1,076,355	+	4	104	87.02	-2.20	0.83	0.944842
278	3R_DroMel_CAF1	1,078,965 – 1,079,070	- - - - - - - - -	479	1,078,965 – 1,079,070	+	6	107	93.25	-0.94	0.95	0.644374
279	3R_DroMel_CAF1	1,082,813 – 1,082,914	- - - - - - - - -	480	1,082,813 – 1,082,914	-	5	101	76.91	-1.58	0.16	0.576159
280	3R_DroMel_CAF1	1,083,554 – 1,083,656	- - - "knownCDS=Parent=FBtr0078780;Name=Hph-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31543-RC" - - - - -	481	1,083,554 – 1,083,656	+	6	102	78.54	-1.63	0.60	0.677445
281	3R_DroMel_CAF1	1,099,971 – 1,100,085	- - - - - - - - -	482	1,099,971 – 1,100,085	-	6	115	77.97	-1.04	0.83	0.718295
282	3R_DroMel_CAF1	1,101,632 – 1,101,722	- - - "knownCDS=Parent=FBtr0078819;Name=CG31538-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31538-RA" - - - - -	483	1,101,632 – 1,101,722	+	6	90	80.89	-1.36	0.67	0.538708
283	3R_DroMel_CAF1	1,104,573 – 1,104,666	- - - - - - - - -	484	1,104,573 – 1,104,666	+	5	93	88.06	-1.39	0.82	0.528409
284	3R_DroMel_CAF1	1,104,717 – 1,104,814	- - - - - - - - -	485	1,104,717 – 1,104,814	+	6	106	73.66	-2.70	0.44	0.991939
285	3R_DroMel_CAF1	1,108,366 – 1,108,485	- - - "knownCDS=Parent=FBtr0078815;Name=l(3)82Fd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32464-RC" - - - - -	486	1,108,366 – 1,108,485	+	6	120	79.29	-1.81	0.56	0.619233
286	3R_DroMel_CAF1	1,108,640 – 1,108,733	- - - - - - - - -	487	1,108,640 – 1,108,733	-	6	95	80.13	-2.38	0.59	0.883018
287	3R_DroMel_CAF1	1,108,922 – 1,109,015	- - - - - - - - -	488	1,108,922 – 1,109,015	-	6	99	79.96	-1.68	0.58	0.523776
288	3R_DroMel_CAF1	1,109,513 – 1,109,648	- - - - - - - - -	489	1,109,513 – 1,109,622	+	5	109	83.41	-2.35	0.59	0.788862
				490	1,109,513 – 1,109,622	-	5	109	83.41	-2.02	0.56	0.500000
				491	1,109,552 – 1,109,648	+	5	97	78.94	-2.06	0.61	0.880913
289	3R_DroMel_CAF1	1,118,335 – 1,118,445	- - - "knownCDS=Parent=FBtr0078811, FBtr0078809, FBtr0078813;Name=l(3)82Fd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32464-RJ, FlyBase+Annotation+IDs:CG32464-RL, FlyBase+Annotation+IDs:CG32464-RF" - - - - -	492	1,118,335 – 1,118,445	+	6	120	76.09	-1.70	0.72	0.951092
290	3R_DroMel_CAF1	1,118,793 – 1,118,897	- - - "knownCDS=Parent=FBtr0078810, FBtr0078812;Name=l(3)82Fd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32464-RB, FlyBase+Annotation+IDs:CG32464-RK" - - - - -	493	1,118,793 – 1,118,897	+	6	120	77.64	-1.04	0.69	0.529428
291	3R_DroMel_CAF1	1,119,320 – 1,119,529	- - - - - - - - -	494	1,119,320 – 1,119,435	-	6	115	83.87	-1.54	0.83	0.596570
				495	1,119,395 – 1,119,500	+	6	120	81.04	-2.10	0.77	0.890715
				496	1,119,395 – 1,119,500	-	6	120	81.04	-2.60	0.78	0.940599
				497	1,119,435 – 1,119,529	+	6	97	81.21	-2.71	0.68	0.917494
				498	1,119,435 – 1,119,529	-	6	97	81.21	-3.15	0.83	0.964390
292	3R_DroMel_CAF1	1,123,812 – 1,123,903	- - - - - - - - -	499	1,123,812 – 1,123,903	+	5	91	93.80	-2.41	0.81	0.983444
293	3R_DroMel_CAF1	1,124,328 – 1,124,418	- - - "knownCDS=Parent=FBtr0100197;Name=l(3)82Fd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32464-RM" - - - - -	500	1,124,328 – 1,124,418	+	6	90	81.56	-1.61	0.65	0.574609
293	3R_DroMel_CAF1	1,124,328 – 1,124,418		501	1,124,328 – 1,124,418	-	6	90	81.56	-1.97	0.67	0.761383
294	3R_DroMel_CAF1	1,126,143 – 1,126,242	- - - "knownCDS=Parent=FBtr0078784;Name=Tim17b1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1158-RA" - - - - -	502	1,126,143 – 1,126,242	+	6	99	84.11	-2.07	0.76	0.683946
295	3R_DroMel_CAF1	1,127,722 – 1,127,821	- - - - - - - - -	503	1,127,722 – 1,127,821	+	5	99	93.52	-2.35	0.74	0.766487
296	3R_DroMel_CAF1	1,128,936 – 1,129,029	- - - - - - - - -	504	1,128,936 – 1,129,029	+	5	98	68.02	-1.91	0.18	0.500000
297	3R_DroMel_CAF1	1,129,388 – 1,129,494	- - - - - - - - -	505	1,129,388 – 1,129,494	-	3	113	88.17	-3.30	0.78	0.936170
298	3R_DroMel_CAF1	1,133,299 – 1,133,396	- - - - - - - - -	506	1,133,299 – 1,133,396	+	4	109	73.49	-1.65	0.61	0.713534
299	3R_DroMel_CAF1	1,141,953 – 1,142,046	- - - - - - - - -	507	1,141,953 – 1,142,046	+	4	95	85.74	-1.56	0.85	0.680644
300	3R_DroMel_CAF1	1,146,997 – 1,147,097	- - - - - - - - -	508	1,146,997 – 1,147,097	+	5	100	71.81	-1.68	0.11	0.725467
300	3R_DroMel_CAF1	1,146,997 – 1,147,097	- - - - - - - - -	509	1,146,997 – 1,147,097	-	5	100	71.81	-1.74	0.23	0.698305
301	3R_DroMel_CAF1	1,149,767 – 1,149,858	- - - - - - - - -	510	1,149,767 – 1,149,858	+	6	99	82.75	-1.59	0.72	0.580918
301	3R_DroMel_CAF1	1,149,767 – 1,149,858	- - - - - - - - -	511	1,149,767 – 1,149,858	-	6	99	82.75	-2.32	0.81	0.888524
302	3R_DroMel_CAF1	1,151,100 – 1,151,194	- - - - - - - - -	512	1,151,100 – 1,151,194	+	4	105	82.91	-1.65	0.69	0.630008
303	3R_DroMel_CAF1	1,152,951 – 1,153,043	- - - - - - - - -	513	1,152,951 – 1,153,043	+	4	92	89.33	-1.91	0.68	0.571031
304	3R_DroMel_CAF1	1,156,585 – 1,156,693	- - - - - - - - -	514	1,156,585 – 1,156,693	+	3	110	74.43	-1.68	0.63	0.867696
305	3R_DroMel_CAF1	1,162,690 – 1,162,858	- - - - - - - - -	515	1,162,690 – 1,162,795	+	4	105	95.24	-1.81	0.82	0.543579
305	3R_DroMel_CAF1	1,162,690 – 1,162,858	- - - - - - - - -	516	1,162,766 – 1,162,858	+	5	110	77.69	-2.22	0.41	0.898028
306	3R_DroMel_CAF1	1,184,750 – 1,184,840	- - - - - - - - -	517	1,184,750 – 1,184,840	+	4	90	92.22	-2.03	0.88	0.935243
307	3R_DroMel_CAF1	1,188,504 – 1,188,596	- - - - - - - - -	518	1,188,504 – 1,188,596	+	5	120	71.30	-1.88	0.31	0.813622
307	3R_DroMel_CAF1	1,188,504 – 1,188,596	- - - - - - - - -	519	1,188,504 – 1,188,596	-	5	120	71.30	-2.36	0.43	0.992205
308	3R_DroMel_CAF1	1,188,789 – 1,188,945	- - - - - - - - -	520	1,188,789 – 1,188,905	+	4	120	84.18	-1.41	0.75	0.500000
308	3R_DroMel_CAF1	1,188,789 – 1,188,945	- - - - - - - - -	521	1,188,825 – 1,188,945	+	4	120	80.83	-1.68	0.69	0.644650
309	3R_DroMel_CAF1	1,195,653 – 1,195,760	- - - "knownCDS=Parent=FBtr0078786;Name=CG31542-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31542-RA" - - - - -	522	1,195,653 – 1,195,760	+	5	107	93.46	-1.19	0.96	0.818028
310	3R_DroMel_CAF1	1,202,948 – 1,203,059	- - - "knownCDS=Parent=FBtr0078789;Name=7B2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1168-RA" - - - - -	523	1,202,948 – 1,203,059	+	6	111	74.86	-1.13	0.69	0.722140
311	3R_DroMel_CAF1	1,207,466 – 1,207,586	- - - "knownCDS=Parent=FBtr0078799;Name=kkv-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2666-RB" - - - - -	524	1,207,466 – 1,207,586	-	6	120	78.83	-2.26	0.56	0.888589
312	3R_DroMel_CAF1	1,210,162 – 1,210,282	- - - "knownCDS=Parent=FBtr0078799;Name=kkv-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2666-RB" - - - - -	525	1,210,162 – 1,210,282	-	6	120	79.94	-1.97	0.67	0.866058
313	3R_DroMel_CAF1	1,213,925 – 1,214,074	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000186;Name=Dmel_Arg_TCG_14000186;TFAMID=DmelRTCG-1213950" "tRNAscan=type:Arg:anticodon:TCG f:1213949_t:1214045_strand=+_cove=69.30" - - "Rfam=AE003494.3/154083-154155_RF00005;tRNA;\|4e-28" - - - "Flybase=FBgn0011965:transfer_RNA:arg:83AB:cytosolic_tRNA_gene\|4e-37"	526	1,213,925 – 1,214,042	-	6	120	82.05	-2.66	0.87	0.963946
				527	1,213,965 – 1,214,074	+	6	112	74.43	-0.97	0.68	0.567507
				528	1,213,965 – 1,214,074	-	6	112	74.43	-0.98	0.73	0.763054
314	3R_DroMel_CAF1	1,215,965 – 1,216,116	- - "RNAmicro=f:1216003_t:1216122_strand:+_p:0.999984" - - - - - -	529	1,215,965 – 1,216,076	-	3	118	81.68	-0.25	0.93	0.616361
				530	1,216,003 – 1,216,116	+	3	120	81.42	-1.94	0.79	0.879125
				531	1,216,003 – 1,216,116	-	3	120	81.42	-3.36	0.84	0.997074
315	3R_DroMel_CAF1	1,218,729 – 1,218,866	- - - - - - - - -	532	1,218,729 – 1,218,830	+	4	101	79.04	-1.89	0.72	0.879649
				533	1,218,753 – 1,218,866	+	3	115	90.72	-3.79	0.73	0.849287
				534	1,218,753 – 1,218,866	-	3	115	90.72	-3.29	0.71	0.757337
316	3R_DroMel_CAF1	1,222,092 – 1,222,195	- - - - - - - - -	535	1,222,092 – 1,222,195	+	6	109	81.42	-3.14	0.70	0.940501
316	3R_DroMel_CAF1	1,222,092 – 1,222,195	- - - - - - - - -	536	1,222,092 – 1,222,195	-	6	109	81.42	-2.94	0.50	0.807738
317	3R_DroMel_CAF1	1,223,952 – 1,224,046	- - - "knownCDS=Parent=FBtr0078797;Name=Or83a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10612-RA" - - - - -	537	1,223,952 – 1,224,046	-	6	98	78.94	-1.81	0.53	0.527268
318	3R_DroMel_CAF1	1,231,384 – 1,231,481	- - - - - - - - -	538	1,231,384 – 1,231,481	+	3	103	90.85	-2.25	0.89	0.879055
318	3R_DroMel_CAF1	1,231,384 – 1,231,481	- - - - - - - - -	539	1,231,384 – 1,231,481	-	3	103	90.85	-2.34	0.76	0.586563
319	3R_DroMel_CAF1	1,240,917 – 1,241,016	- - - - - - - - -	540	1,240,917 – 1,241,016	+	5	111	73.74	-1.96	0.50	0.892406
320	3R_DroMel_CAF1	1,241,691 – 1,241,781	- - - - - - - - -	541	1,241,691 – 1,241,781	+	6	104	70.21	-2.35	0.40	0.977923
321	3R_DroMel_CAF1	1,242,958 – 1,243,069	- - - - - - - - -	542	1,242,958 – 1,243,069	+	6	115	74.20	-2.33	0.38	0.895338
322	3R_DroMel_CAF1	1,243,990 – 1,244,081	- - - - - - - - -	543	1,243,990 – 1,244,081	-	4	96	82.35	-1.59	0.71	0.593539
323	3R_DroMel_CAF1	1,244,624 – 1,244,740	- - - - - - - - -	544	1,244,624 – 1,244,740	+	6	118	82.91	-2.44	0.59	0.586990
324	3R_DroMel_CAF1	1,245,165 – 1,245,261	- - - - - - - - -	545	1,245,165 – 1,245,261	-	6	100	74.13	-2.30	0.38	0.879263
325	3R_DroMel_CAF1	1,249,534 – 1,249,627	- - - - - - - - -	546	1,249,534 – 1,249,627	+	5	101	79.21	-2.37	0.32	0.889316
325	3R_DroMel_CAF1	1,249,534 – 1,249,627	- - - - - - - - -	547	1,249,534 – 1,249,627	-	5	101	79.21	-2.00	0.53	0.718622
326	3R_DroMel_CAF1	1,250,191 – 1,250,307	- - - - - - - - -	548	1,250,191 – 1,250,307	+	4	116	76.16	-2.09	0.56	0.862729
327	3R_DroMel_CAF1	1,251,508 – 1,251,619	- - - "knownCDS=Parent=FBtr0078793;Name=CG12147-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12147-RA" - - - - -	549	1,251,508 – 1,251,619	+	4	111	84.66	-2.91	0.71	0.982031
327	3R_DroMel_CAF1	1,251,508 – 1,251,619		550	1,251,508 – 1,251,619	-	4	111	84.66	-1.96	0.79	0.870597
328	3R_DroMel_CAF1	1,253,263 – 1,253,374	- - - - - - - - -	551	1,253,263 – 1,253,374	+	4	112	86.49	-1.76	0.77	0.763081
329	3R_DroMel_CAF1	1,253,822 – 1,253,921	- - - - - - - - -	552	1,253,822 – 1,253,921	-	3	101	93.40	-2.79	0.80	0.788631
330	3R_DroMel_CAF1	1,259,897 – 1,259,988	- - - - - - - - -	553	1,259,897 – 1,259,988	+	3	91	96.32	-1.54	0.97	0.614493
330	3R_DroMel_CAF1	1,259,897 – 1,259,988	- - - - - - - - -	554	1,259,897 – 1,259,988	-	3	91	96.32	-1.58	0.96	0.610079
331	3R_DroMel_CAF1	1,261,533 – 1,261,633	- - - - - - - - -	555	1,261,533 – 1,261,633	+	3	109	85.63	-2.09	0.70	0.610031
332	3R_DroMel_CAF1	1,262,353 – 1,262,449	- - - - - - - - -	556	1,262,353 – 1,262,449	+	6	120	80.06	-1.60	0.59	0.512037
333	3R_DroMel_CAF1	1,263,246 – 1,263,383	- - - - - - - - -	557	1,263,246 – 1,263,366	+	6	120	92.00	-2.55	0.85	0.963843
333	3R_DroMel_CAF1	1,263,246 – 1,263,383	- - - - - - - - -	558	1,263,286 – 1,263,383	+	6	119	80.38	-2.05	0.71	0.889964
334	3R_DroMel_CAF1	1,279,716 – 1,279,825	- - - - - - - - -	559	1,279,716 – 1,279,825	-	5	109	82.39	-2.02	0.63	0.737567
335	3R_DroMel_CAF1	1,280,265 – 1,280,364	- - - - - - - - -	560	1,280,265 – 1,280,364	+	6	99	82.50	-2.01	0.68	0.685603
336	3R_DroMel_CAF1	1,285,167 – 1,285,287	- - - "knownCDS=Parent=FBtr0078770;Name=PEK-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2087-RA" - - - - -	561	1,285,167 – 1,285,287	+	6	120	72.06	-1.76	0.42	0.528519
337	3R_DroMel_CAF1	1,287,042 – 1,287,159	- - - "knownCDS=Parent=FBtr0078770;Name=PEK-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2087-RA" - - - - -	562	1,287,042 – 1,287,159	-	6	120	78.36	-1.92	0.60	0.851372
338	3R_DroMel_CAF1	1,287,768 – 1,287,883	- - - "knownCDS=Parent=FBtr0078770;Name=PEK-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2087-RA" - - - - -	563	1,287,768 – 1,287,883	-	6	115	77.32	-1.76	0.57	0.760843
339	3R_DroMel_CAF1	1,297,240 – 1,297,342	- - - - - - - - -	564	1,297,240 – 1,297,342	+	3	110	87.58	-2.47	0.82	0.862709
340	3R_DroMel_CAF1	1,308,814 – 1,308,918	- - - "knownCDS=Parent=FBtr0078766;Name=ksr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2899-RA" - - - - -	565	1,308,814 – 1,308,918	-	6	111	74.04	-1.95	0.46	0.794730
341	3R_DroMel_CAF1	1,312,123 – 1,312,216	- - - "knownCDS=Parent=FBtr0078684;Name=CG31550-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31550-RB" - - - - -	566	1,312,123 – 1,312,216	+	6	96	81.56	-1.40	0.71	0.584514
342	3R_DroMel_CAF1	1,312,714 – 1,312,856	- - - - - - - - -	567	1,312,714 – 1,312,816	+	6	119	83.92	-2.67	0.94	0.990189
342	3R_DroMel_CAF1	1,312,714 – 1,312,856	- - - - - - - - -	568	1,312,737 – 1,312,856	+	6	119	95.52	-1.98	0.91	0.993042
343	3R_DroMel_CAF1	1,321,918 – 1,322,035	- - - - - - - - -	569	1,321,918 – 1,322,035	+	3	120	87.11	-3.05	0.75	0.914748
344	3R_DroMel_CAF1	1,322,073 – 1,322,183	- - - - - - - - -	570	1,322,073 – 1,322,183	+	3	110	78.78	-2.12	0.63	0.899711
344	3R_DroMel_CAF1	1,322,073 – 1,322,183	- - - - - - - - -	571	1,322,073 – 1,322,183	-	3	110	78.78	-2.69	0.69	0.995769
345	3R_DroMel_CAF1	1,327,212 – 1,327,307	- - - - - - - - -	572	1,327,212 – 1,327,307	+	4	113	76.10	-3.58	0.66	0.999953
345	3R_DroMel_CAF1	1,327,212 – 1,327,307	- - - - - - - - -	573	1,327,212 – 1,327,307	-	4	113	76.10	-1.91	0.63	0.868730
346	3R_DroMel_CAF1	1,340,099 – 1,340,202	- - - - - - - - -	574	1,340,099 – 1,340,202	-	6	115	75.34	-1.53	0.57	0.629385
347	3R_DroMel_CAF1	1,345,535 – 1,345,626	- - - - - - - - -	575	1,345,535 – 1,345,626	+	5	100	69.17	-1.77	0.43	0.697635
348	3R_DroMel_CAF1	1,349,065 – 1,349,155	- - - - - - - - -	576	1,349,065 – 1,349,155	-	6	92	82.41	-1.86	0.63	0.551607
349	3R_DroMel_CAF1	1,350,007 – 1,350,099	- - - - - - - - -	577	1,350,007 – 1,350,099	+	3	92	84.39	-1.58	0.78	0.500000
349	3R_DroMel_CAF1	1,350,007 – 1,350,099	- - - - - - - - -	578	1,350,007 – 1,350,099	-	3	92	84.39	-1.80	0.87	0.834947
350	3R_DroMel_CAF1	1,353,435 – 1,353,536	- - - - - - - - -	579	1,353,435 – 1,353,536	+	3	101	81.19	-1.71	0.71	0.665158
351	3R_DroMel_CAF1	1,363,073 – 1,363,168	- - - - - - - - -	580	1,363,073 – 1,363,168	+	6	103	74.16	-1.13	0.73	0.855274
352	3R_DroMel_CAF1	1,371,367 – 1,371,466	- - - "knownCDS=Parent=FBtr0078761;Name=CG2519-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2519-RA" - - - - -	581	1,371,367 – 1,371,466	-	6	117	83.67	-1.87	0.78	0.693986
353	3R_DroMel_CAF1	1,374,404 – 1,374,524	- - - "knownCDS=Parent=FBtr0089313;Name=mia-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10390-RA" - - - - -	582	1,374,404 – 1,374,524	+	5	120	82.21	-1.64	0.70	0.595138
353	3R_DroMel_CAF1	1,374,404 – 1,374,524		583	1,374,404 – 1,374,524	-	5	120	82.21	-2.20	0.55	0.698051
354	3R_DroMel_CAF1	1,376,912 – 1,377,019	- - - - - - - - -	584	1,376,912 – 1,377,019	-	6	120	74.17	-1.96	0.55	0.929830
355	3R_DroMel_CAF1	1,383,274 – 1,383,380	- - - - - - - - -	585	1,383,274 – 1,383,380	+	5	106	84.81	-2.07	0.59	0.500000
356	3R_DroMel_CAF1	1,385,672 – 1,385,769	- - - - - - - - -	586	1,385,672 – 1,385,769	-	6	108	75.91	-1.65	0.61	0.845911
357	3R_DroMel_CAF1	1,386,803 – 1,386,911	- - - - - - - - -	587	1,386,803 – 1,386,911	+	6	114	79.70	-2.02	0.71	0.910619
358	3R_DroMel_CAF1	1,392,739 – 1,392,899	- - - "knownCDS=Parent=FBtr0078690;Name=CG12746-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12746-RA" - - - - -	588	1,392,739 – 1,392,859	+	6	120	79.44	-2.63	0.58	0.943729
				589	1,392,739 – 1,392,859	-	6	120	79.44	-2.20	0.51	0.719191
				590	1,392,779 – 1,392,899	+	6	120	79.06	-3.61	0.55	0.990116
				591	1,392,779 – 1,392,899	-	6	120	79.06	-2.45	0.46	0.782874
359	3R_DroMel_CAF1	1,394,175 – 1,394,276	- - - - - - - - -	592	1,394,175 – 1,394,276	-	6	120	73.84	-1.11	0.65	0.580634
360	3R_DroMel_CAF1	1,394,859 – 1,394,964	- - - - - - - - -	593	1,394,859 – 1,394,964	+	5	108	91.74	-1.66	0.79	0.742523
361	3R_DroMel_CAF1	1,397,077 – 1,397,458	- - - - - - - - -	594	1,397,077 – 1,397,192	+	4	119	93.40	-2.49	0.84	0.937860
				595	1,397,077 – 1,397,192	-	4	119	93.40	-1.68	0.79	0.500000
				596	1,397,112 – 1,397,223	-	4	120	87.55	-1.83	0.72	0.720053
				597	1,397,223 – 1,397,343	-	4	120	91.81	-1.60	0.81	0.611969
				598	1,397,263 – 1,397,379	+	4	120	90.09	-2.13	0.81	0.899905
				599	1,397,263 – 1,397,379	-	4	120	90.09	-2.40	0.80	0.939292
				600	1,397,303 – 1,397,418	+	4	120	92.08	-2.50	0.86	0.973527
				601	1,397,303 – 1,397,418	-	4	120	92.08	-2.39	0.85	0.958146
				602	1,397,343 – 1,397,458	+	4	120	92.50	-1.75	0.85	0.781036
362	3R_DroMel_CAF1	1,398,190 – 1,398,382	- - - - - - - - -	603	1,398,190 – 1,398,302	-	4	120	75.04	-2.82	0.45	0.958958
362	3R_DroMel_CAF1	1,398,190 – 1,398,382	- - - - - - - - -	604	1,398,262 – 1,398,382	-	4	120	86.26	-1.58	0.70	0.594277
363	3R_DroMel_CAF1	1,398,975 – 1,399,168	- - - - - - - - -	605	1,398,975 – 1,399,094	-	4	120	93.58	-1.91	0.88	0.878901
363	3R_DroMel_CAF1	1,398,975 – 1,399,168	- - - - - - - - -	606	1,399,054 – 1,399,168	+	3	114	94.15	-1.93	0.88	0.628342
364	3R_DroMel_CAF1	1,400,795 – 1,400,885	- - - - - - - - -	607	1,400,795 – 1,400,885	+	3	90	84.62	-1.44	1.01	0.989162
365	3R_DroMel_CAF1	1,407,827 – 1,407,927	- - - "knownCDS=Parent=FBtr0078752;Name=CG2926-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2926-RA" - - - - -	608	1,407,827 – 1,407,927	-	6	112	76.39	-2.42	0.64	0.984904
366	3R_DroMel_CAF1	1,411,786 – 1,411,905	- - - "knownCDS=Parent=FBtr0078752;Name=CG2926-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2926-RA" - - - - -	609	1,411,786 – 1,411,905	-	6	119	82.63	-2.27	0.67	0.728723
367	3R_DroMel_CAF1	1,419,283 – 1,419,404	- - - - - - - - -	610	1,419,283 – 1,419,388	+	5	105	97.14	-2.32	0.98	0.999774
367	3R_DroMel_CAF1	1,419,283 – 1,419,404	- - - - - - - - -	611	1,419,313 – 1,419,404	+	5	91	97.80	-2.66	0.97	0.999858
368	3R_DroMel_CAF1	1,419,726 – 1,419,837	- - "RNAmicro=f:1419726_t:1419836_strand:-_p:0.976833" - - - - - -	612	1,419,726 – 1,419,837	+	6	111	82.58	-2.40	0.78	0.880435
368	3R_DroMel_CAF1	1,419,726 – 1,419,837		613	1,419,726 – 1,419,837	-	6	111	82.58	-3.15	0.72	0.910763
369	3R_DroMel_CAF1	1,421,916 – 1,422,006	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002558;Name=psi28s-3385b;Dbxref=FB:FBgn0082961 ,GB:AJ809579" - - - - - - - -	614	1,421,916 – 1,422,006	-	6	91	81.33	-1.71	0.77	0.790520
370	3R_DroMel_CAF1	1,422,082 – 1,422,185	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002559;Name=psi28s-3385a;Dbxref=FB:FBgn0082962 ,GB:AJ809578" - - - - - - - -	615	1,422,082 – 1,422,185	-	6	109	77.92	-1.17	0.79	0.783973
371	3R_DroMel_CAF1	1,422,256 – 1,422,374	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002560;Name=psi28s-3091b;Dbxref=FB:FBgn0082978 ,GB:AJ809577" - - - - - - - -	616	1,422,256 – 1,422,374	+	4	120	94.54	-2.02	0.88	0.882369
371	3R_DroMel_CAF1	1,422,256 – 1,422,374		617	1,422,256 – 1,422,374	-	4	120	94.54	-1.92	0.78	0.512713
372	3R_DroMel_CAF1	1,422,404 – 1,422,533	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002561;Name=psi28s-3091a;Dbxref=FB:FBgn0082979 ,GB:AJ809576" - - - - - - - -	618	1,422,404 – 1,422,506	-	6	107	80.48	-1.65	0.75	0.809259
				619	1,422,436 – 1,422,533	+	6	109	75.78	-1.61	0.62	0.837908
				620	1,422,436 – 1,422,533	-	6	109	75.78	-1.55	0.80	0.955976
373	3R_DroMel_CAF1	1,423,055 – 1,423,174	- - - "knownCDS=Parent=FBtr0078745, FBtr0078746, FBtr0078747, FBtr0078749, FBtr0078750;Name=eIF-5C-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2922-RG, FlyBase+Annotation+IDs:CG2922-RC, FlyBase+Annotation+IDs:CG2922-RF, FlyBase+Annotation+IDs:CG2922-RB, FlyBase+Annotation+IDs:CG2922-RE" - - - - -	621	1,423,055 – 1,423,174	+	6	119	86.27	-2.48	0.74	0.564595
374	3R_DroMel_CAF1	1,423,401 – 1,423,500	- - - - - - - - -	622	1,423,401 – 1,423,500	-	6	105	79.96	-1.34	0.81	0.744676
375	3R_DroMel_CAF1	1,424,139 – 1,424,252	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002564;Name=psi28s-2442b;Dbxref=FB:FBgn0082988 ,GB:AJ809573" - - - - - - - -	623	1,424,139 – 1,424,252	-	6	117	78.87	-1.18	0.72	0.646172
376	3R_DroMel_CAF1	1,427,331 – 1,427,434	- - - - - - - - -	624	1,427,331 – 1,427,434	+	6	112	79.32	-1.49	0.66	0.692469
377	3R_DroMel_CAF1	1,444,723 – 1,444,814	- - - - - - - - -	625	1,444,723 – 1,444,814	+	3	91	83.72	-1.78	0.74	0.610379
377	3R_DroMel_CAF1	1,444,723 – 1,444,814	- - - - - - - - -	626	1,444,723 – 1,444,814	-	3	91	83.72	-1.97	0.66	0.591666
378	3R_DroMel_CAF1	1,450,559 – 1,450,705	- - - - - - - - -	627	1,450,559 – 1,450,665	+	6	108	84.31	-1.66	0.81	0.610950
				628	1,450,593 – 1,450,705	+	6	120	81.70	-2.47	0.83	0.939882
				629	1,450,593 – 1,450,705	-	6	120	81.70	-1.96	0.69	0.773071
379	3R_DroMel_CAF1	1,451,634 – 1,451,829	- - - - - - - - -	630	1,451,634 – 1,451,749	+	4	115	83.19	-1.81	0.67	0.698251
379	3R_DroMel_CAF1	1,451,634 – 1,451,829	- - - - - - - - -	631	1,451,709 – 1,451,829	-	3	120	70.92	-2.27	0.54	0.985967
380	3R_DroMel_CAF1	1,451,857 – 1,452,010	- - - - - - - - -	632	1,451,857 – 1,451,970	-	5	120	73.37	-1.22	0.68	0.577496
380	3R_DroMel_CAF1	1,451,857 – 1,452,010	- - - - - - - - -	633	1,451,891 – 1,452,010	-	5	120	78.37	-2.67	0.62	0.993685
381	3R_DroMel_CAF1	1,452,467 – 1,452,572	- - - "knownCDS=Parent=FBtr0078738;Name=CG14673-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14673-RA" - - - - -	634	1,452,467 – 1,452,572	+	5	120	79.73	-1.60	0.68	0.611538
382	3R_DroMel_CAF1	1,454,286 – 1,454,406	- - - "knownCDS=Parent=FBtr0078706;Name=CG31551-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31551-RA" - - - - -	635	1,454,286 – 1,454,406	+	5	120	89.67	-1.88	0.86	0.966234
383	3R_DroMel_CAF1	1,455,016 – 1,455,136	- - - "knownCDS=Parent=FBtr0078706;Name=CG31551-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31551-RA" - - - - -	636	1,455,016 – 1,455,136	+	3	120	97.22	-1.72	0.92	0.577032
384	3R_DroMel_CAF1	1,456,666 – 1,456,786	- - - "knownCDS=Parent=FBtr0078706;Name=CG31551-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31551-RA" - - - - -	637	1,456,666 – 1,456,786	+	5	120	81.41	-1.68	0.62	0.510997
385	3R_DroMel_CAF1	1,457,181 – 1,457,301	- - - "knownCDS=Parent=FBtr0078706;Name=CG31551-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31551-RA" - - - - -	638	1,457,181 – 1,457,301	+	5	120	88.67	-1.63	0.81	0.755972
386	3R_DroMel_CAF1	1,457,932 – 1,458,037	- - - - - - - - -	639	1,457,932 – 1,458,037	-	3	108	65.73	-1.30	0.61	0.870156
387	3R_DroMel_CAF1	1,463,279 – 1,463,479	- - - "knownCDS=Parent=FBtr0078709;Name=CG12170-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12170-RA" - - - - -	640	1,463,279 – 1,463,399	-	5	120	93.92	-1.75	0.83	0.920242
387	3R_DroMel_CAF1	1,463,279 – 1,463,479		641	1,463,359 – 1,463,479	-	5	120	92.58	-1.54	0.83	0.795030
388	3R_DroMel_CAF1	1,463,519 – 1,463,639	- - - "knownCDS=Parent=FBtr0078709;Name=CG12170-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12170-RA" - - - - -	642	1,463,519 – 1,463,639	-	5	120	94.17	-1.32	0.88	0.745015
389	3R_DroMel_CAF1	1,463,759 – 1,463,879	- - - "knownCDS=Parent=FBtr0078709;Name=CG12170-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12170-RA" - - - - -	643	1,463,759 – 1,463,879	+	5	120	94.00	-1.24	0.93	0.816049
390	3R_DroMel_CAF1	1,464,973 – 1,465,096	- - - - - - - - -	644	1,464,973 – 1,465,079	+	3	120	85.51	-1.44	0.85	0.506624
390	3R_DroMel_CAF1	1,464,973 – 1,465,096	- - - - - - - - -	645	1,465,006 – 1,465,096	-	3	97	89.93	-2.13	0.84	0.735813
391	3R_DroMel_CAF1	1,465,586 – 1,465,699	- - - - - - - - -	646	1,465,586 – 1,465,699	-	5	120	87.41	-1.51	0.80	0.591408
392	3R_DroMel_CAF1	1,465,990 – 1,466,134	- - - - - - - - -	647	1,465,990 – 1,466,110	-	5	120	95.58	-1.54	0.84	0.762732
392	3R_DroMel_CAF1	1,465,990 – 1,466,134	- - - - - - - - -	648	1,466,030 – 1,466,134	-	5	110	90.64	-1.43	0.85	0.749455
393	3R_DroMel_CAF1	1,471,332 – 1,471,423	- - - - - - - - -	649	1,471,332 – 1,471,423	+	6	97	82.63	-1.46	0.75	0.574152
394	3R_DroMel_CAF1	1,471,873 – 1,471,968	- - - - - - - - -	650	1,471,873 – 1,471,968	-	5	106	76.70	-1.86	0.72	0.944702
395	3R_DroMel_CAF1	1,475,434 – 1,475,553	- - - "knownCDS=Parent=FBtr0078710;Name=sec23-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1250-RB" - - - - -	651	1,475,434 – 1,475,553	-	6	119	81.46	-1.44	0.67	0.541836
396	3R_DroMel_CAF1	1,475,878 – 1,475,998	- - - "knownCDS=Parent=FBtr0078711;Name=sec23-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1250-RA" - - - - -	652	1,475,878 – 1,475,998	+	6	120	86.28	-1.52	0.89	0.677934
397	3R_DroMel_CAF1	1,477,473 – 1,477,572	- - - - - - - - -	653	1,477,473 – 1,477,572	-	6	101	88.76	-2.61	0.76	0.538812
398	3R_DroMel_CAF1	1,482,754 – 1,482,848	- - - "knownCDS=Parent=FBtr0078730, FBtr0078731;Name=CG2182-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2182-RA, FlyBase+Annotation+IDs:CG2182-RB" - - - - -	654	1,482,754 – 1,482,848	-	6	100	82.78	-1.49	0.76	0.574152
399	3R_DroMel_CAF1	1,484,571 – 1,484,672	- - - - - - - - -	655	1,484,571 – 1,484,672	+	3	101	89.37	-1.45	0.90	0.500000
400	3R_DroMel_CAF1	1,484,768 – 1,484,877	- - - - - - - - -	656	1,484,768 – 1,484,877	-	5	110	78.60	-1.85	0.56	0.646482
401	3R_DroMel_CAF1	1,489,000 – 1,489,114	- - - - - - - - -	657	1,489,000 – 1,489,114	-	6	115	78.21	-1.02	0.70	0.515471
402	3R_DroMel_CAF1	1,493,684 – 1,493,785	- - - - - - - - -	658	1,493,684 – 1,493,785	-	6	104	82.16	-1.50	0.66	0.510917
403	3R_DroMel_CAF1	1,494,409 – 1,494,526	- - - "knownCDS=Parent=FBtr0078728;Name=Xe7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2179-RA" - - - - -	659	1,494,409 – 1,494,526	+	6	120	81.91	-1.50	0.69	0.584777
403	3R_DroMel_CAF1	1,494,409 – 1,494,526		660	1,494,409 – 1,494,526	-	6	120	81.91	-2.07	0.62	0.657618
404	3R_DroMel_CAF1	1,503,822 – 1,503,962	- - - "knownCDS=Parent=FBtr0078716;Name=CG1347-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1347-RB" - - - - -	661	1,503,822 – 1,503,934	+	6	120	79.54	-2.08	0.61	0.860243
404	3R_DroMel_CAF1	1,503,822 – 1,503,962		662	1,503,862 – 1,503,962	+	6	111	74.32	-2.14	0.50	0.942598
405	3R_DroMel_CAF1	1,506,815 – 1,506,909	- - - - - - - - -	663	1,506,815 – 1,506,909	+	6	111	78.27	-1.80	0.52	0.500000
406	3R_DroMel_CAF1	1,509,599 – 1,509,695	- - - - - - - - -	664	1,509,599 – 1,509,695	+	5	96	67.58	-2.25	0.25	0.888126
407	3R_DroMel_CAF1	1,517,216 – 1,517,311	- - - - - - - - -	665	1,517,216 – 1,517,311	-	4	95	83.51	-1.50	0.68	0.500000
408	3R_DroMel_CAF1	1,521,269 – 1,521,393	- - - - - - - - -	666	1,521,269 – 1,521,362	+	3	116	74.85	-1.81	0.62	0.904386
				667	1,521,269 – 1,521,362	-	3	116	74.85	-3.12	0.58	0.999544
				668	1,521,282 – 1,521,393	+	3	120	82.25	-2.02	0.66	0.711375
				669	1,521,282 – 1,521,393	-	3	120	82.25	-3.03	0.72	0.986624
409	3R_DroMel_CAF1	1,526,132 – 1,526,228	- - - - - - - - -	670	1,526,132 – 1,526,228	-	5	109	68.37	-1.86	0.29	0.622870
410	3R_DroMel_CAF1	1,531,730 – 1,531,823	- - - - - - - - -	671	1,531,730 – 1,531,823	+	6	105	69.74	-2.53	0.41	0.991862
410	3R_DroMel_CAF1	1,531,730 – 1,531,823	- - - - - - - - -	672	1,531,730 – 1,531,823	-	6	105	69.74	-1.35	0.62	0.818473
411	3R_DroMel_CAF1	1,532,033 – 1,532,127	- - - - - - - - -	673	1,532,033 – 1,532,127	+	4	99	89.90	-1.47	0.78	0.549798
412	3R_DroMel_CAF1	1,536,964 – 1,537,054	- - - "knownCDS=Parent=FBtr0078718, FBtr0078719;Name=plx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1093-RA, FlyBase+Annotation+IDs:CG1093-RB" - - - - -	674	1,536,964 – 1,537,054	+	6	111	80.76	-1.58	0.71	0.737574
413	3R_DroMel_CAF1	1,541,526 – 1,541,616	- - "RNAmicro=f:1541526_t:1541639_strand:+_p:0.968399" "knownCDS=Parent=FBtr0078725;Name=cas-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2102-RA" - - - - -	675	1,541,526 – 1,541,616	+	6	114	78.24	-3.28	0.64	0.989640
413	3R_DroMel_CAF1	1,541,526 – 1,541,616		676	1,541,526 – 1,541,616	-	6	114	78.24	-3.19	0.64	0.988726
414	3R_DroMel_CAF1	1,541,775 – 1,541,899	- - - "knownCDS=Parent=FBtr0078725;Name=cas-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2102-RA" - - - - -	677	1,541,775 – 1,541,874	-	6	114	75.74	-2.26	0.39	0.759460
414	3R_DroMel_CAF1	1,541,775 – 1,541,899		678	1,541,801 – 1,541,899	-	6	101	82.39	-3.26	0.48	0.744164
415	3R_DroMel_CAF1	1,544,047 – 1,544,183	- - - - - - - - -	679	1,544,047 – 1,544,159	+	6	112	82.15	-2.04	0.81	0.863897
				680	1,544,087 – 1,544,183	+	6	100	81.55	-2.02	0.89	0.926465
				681	1,544,087 – 1,544,183	-	6	100	81.55	-2.59	0.86	0.955594
416	3R_DroMel_CAF1	1,544,191 – 1,544,290	- - - - - - - - -	682	1,544,191 – 1,544,290	+	6	106	78.97	-2.33	0.51	0.834513
416	3R_DroMel_CAF1	1,544,191 – 1,544,290	- - - - - - - - -	683	1,544,191 – 1,544,290	-	6	106	78.97	-1.82	0.53	0.539053
417	3R_DroMel_CAF1	1,545,370 – 1,545,469	- - - - - - - - -	684	1,545,370 – 1,545,469	+	6	116	79.26	-1.31	0.72	0.715098
417	3R_DroMel_CAF1	1,545,370 – 1,545,469	- - - - - - - - -	685	1,545,370 – 1,545,469	-	6	116	79.26	-1.90	0.57	0.715148
418	3R_DroMel_CAF1	1,546,335 – 1,546,435	- - - - - - - - -	686	1,546,335 – 1,546,435	+	6	120	81.62	-2.81	0.61	0.877666
419	3R_DroMel_CAF1	1,547,545 – 1,547,645	- - - - - - - - -	687	1,547,545 – 1,547,645	-	6	107	80.16	-2.51	0.52	0.829298
420	3R_DroMel_CAF1	1,547,651 – 1,547,763	- - - - - - - - -	688	1,547,651 – 1,547,763	+	6	119	80.95	-2.03	0.68	0.831018
420	3R_DroMel_CAF1	1,547,651 – 1,547,763	- - - - - - - - -	689	1,547,651 – 1,547,763	-	6	119	80.95	-1.50	0.66	0.608317
421	3R_DroMel_CAF1	1,547,991 – 1,548,092	- - - - - - - - -	690	1,547,991 – 1,548,092	+	6	114	78.73	-1.97	0.59	0.828693
421	3R_DroMel_CAF1	1,547,991 – 1,548,092	- - - - - - - - -	691	1,547,991 – 1,548,092	-	6	114	78.73	-1.95	0.52	0.625287
422	3R_DroMel_CAF1	1,549,026 – 1,549,118	- - - - - - - - -	692	1,549,026 – 1,549,118	+	6	106	79.87	-1.40	0.65	0.581983
423	3R_DroMel_CAF1	1,550,954 – 1,551,048	- - - - - - - - -	693	1,550,954 – 1,551,048	+	6	98	76.84	-2.13	0.53	0.894217
424	3R_DroMel_CAF1	1,552,266 – 1,552,368	- - - - - - - - -	694	1,552,266 – 1,552,368	-	6	108	80.36	-1.63	0.60	0.557336
425	3R_DroMel_CAF1	1,555,639 – 1,555,730	- - - - - - - - -	695	1,555,639 – 1,555,730	+	4	92	87.86	-1.81	0.73	0.727178
426	3R_DroMel_CAF1	1,568,874 – 1,568,977	- - - "knownCDS=Parent=FBtr0078722;Name=Madm-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1098-RA" - - - - -	696	1,568,874 – 1,568,977	+	6	103	81.68	-1.31	0.69	0.505010
427	3R_DroMel_CAF1	1,570,377 – 1,570,477	- - - - - - - - -	697	1,570,377 – 1,570,477	-	3	100	88.36	-2.09	0.72	0.509037
428	3R_DroMel_CAF1	1,570,911 – 1,571,031	- - - "knownCDS=Parent=FBtr0078722;Name=Madm-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1098-RA" - - - - -	698	1,570,911 – 1,571,031	-	6	120	82.72	-1.84	0.70	0.647937
429	3R_DroMel_CAF1	1,583,006 – 1,583,104	- - - - - - - - -	699	1,583,006 – 1,583,104	-	6	105	77.02	-1.12	0.72	0.714742
430	3R_DroMel_CAF1	1,587,305 – 1,587,418	- - - "knownCDS=Parent=FBtr0078672, FBtr0078675, FBtr0078676, FBtr0078674, FBtr0078673;Name=CG2082-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2082-RC, FlyBase+Annotation+IDs:CG2082-RA, FlyBase+Annotation+IDs:CG2082-RD, FlyBase+Annotation+IDs:CG2082-RB, FlyBase+Annotation+IDs:CG2082-RE" - - - - -	700	1,587,305 – 1,587,418	+	6	115	78.55	-2.06	0.56	0.837772
431	3R_DroMel_CAF1	1,623,634 – 1,623,748	- - - "knownCDS=Parent=FBtr0078631;Name=CG10979-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10979-RA" - - - - -	701	1,623,634 – 1,623,748	+	6	119	84.21	-2.43	0.66	0.539902
432	3R_DroMel_CAF1	1,624,011 – 1,624,124	- - - "knownCDS=Parent=FBtr0078631;Name=CG10979-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10979-RA" - - - - -	702	1,624,011 – 1,624,124	+	6	120	78.83	-2.47	0.57	0.939196
432	3R_DroMel_CAF1	1,624,011 – 1,624,124		703	1,624,011 – 1,624,124	-	6	120	78.83	-2.14	0.71	0.946307
433	3R_DroMel_CAF1	1,626,192 – 1,626,308	- - - - - - - - -	704	1,626,192 – 1,626,308	-	5	119	80.54	-2.04	0.71	0.909855
434	3R_DroMel_CAF1	1,629,976 – 1,630,117	- - - - - - - - -	705	1,629,976 – 1,630,085	+	5	111	81.47	-1.87	0.76	0.848353
				706	1,629,976 – 1,630,085	-	5	111	81.47	-2.21	0.82	0.964750
				707	1,630,012 – 1,630,117	+	5	115	78.76	-1.64	0.72	0.773765
				708	1,630,012 – 1,630,117	-	5	115	78.76	-3.06	0.64	0.998276
435	3R_DroMel_CAF1	1,634,698 – 1,634,796	- - - - - - - - -	709	1,634,698 – 1,634,796	-	6	117	77.23	-1.93	0.57	0.854766
436	3R_DroMel_CAF1	1,635,965 – 1,636,081	- - - - - - - - -	710	1,635,965 – 1,636,081	-	3	120	87.64	-2.47	0.75	0.769245
437	3R_DroMel_CAF1	1,642,491 – 1,642,602	- - - "knownCDS=Parent=FBtr0078637;Name=CG31554-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31554-RA" - - - - -	711	1,642,491 – 1,642,602	+	5	119	72.05	-1.99	0.52	0.942280
437	3R_DroMel_CAF1	1,642,491 – 1,642,602		712	1,642,491 – 1,642,602	-	5	119	72.05	-1.82	0.46	0.778498
438	3R_DroMel_CAF1	1,657,208 – 1,657,320	- - - - - - - - -	713	1,657,208 – 1,657,320	+	6	120	75.88	-1.60	0.54	0.546259
439	3R_DroMel_CAF1	1,663,851 – 1,664,005	- - - "knownCDS=Parent=FBtr0078641;Name=CG1208-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1208-RA" - - - - -	714	1,663,851 – 1,663,965	+	6	120	68.71	-2.54	0.45	0.994661
439	3R_DroMel_CAF1	1,663,851 – 1,664,005		715	1,663,885 – 1,664,005	+	6	120	72.89	-1.83	0.49	0.809441
440	3R_DroMel_CAF1	1,666,205 – 1,666,321	- - - - - - - - -	716	1,666,205 – 1,666,321	+	6	117	80.70	-1.92	0.59	0.659080
440	3R_DroMel_CAF1	1,666,205 – 1,666,321	- - - - - - - - -	717	1,666,205 – 1,666,321	-	6	117	80.70	-1.58	0.66	0.658431
441	3R_DroMel_CAF1	1,671,971 – 1,672,091	- - - "knownCDS=Parent=FBtr0078642, FBtr0078643, FBtr0078644;Name=CG1213-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1213-RB, FlyBase+Annotation+IDs:CG1213-RA, FlyBase+Annotation+IDs:CG1213-RC" - - - - -	718	1,671,971 – 1,672,091	+	5	120	75.58	-1.88	0.43	0.704472
442	3R_DroMel_CAF1	1,674,336 – 1,674,438	- - - - - - - - -	719	1,674,336 – 1,674,438	-	3	107	85.80	-2.11	0.72	0.657766
443	3R_DroMel_CAF1	1,685,166 – 1,685,282	- - - - - - - - -	720	1,685,166 – 1,685,282	-	6	117	78.10	-1.76	0.69	0.905533
444	3R_DroMel_CAF1	1,691,918 – 1,692,017	- - - "knownCDS=Parent=FBtr0078660;Name=CG10989-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10989-RA" - - - - -	721	1,691,918 – 1,692,017	-	6	105	75.62	-1.97	0.42	0.546780
445	3R_DroMel_CAF1	1,701,210 – 1,701,304	- - - - - - - - -	722	1,701,210 – 1,701,304	-	6	101	79.51	-2.04	0.61	0.849310
446	3R_DroMel_CAF1	1,704,409 – 1,704,561	- - - "knownCDS=Parent=FBtr0078659;Name=CG14677-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14677-RA" - - - - -	723	1,704,409 – 1,704,529	-	6	120	81.15	-1.41	0.67	0.552565
446	3R_DroMel_CAF1	1,704,409 – 1,704,561		724	1,704,449 – 1,704,561	-	6	118	79.62	-1.75	0.57	0.598610
447	3R_DroMel_CAF1	1,707,876 – 1,707,989	- - - - - - - - -	725	1,707,876 – 1,707,989	+	3	113	83.38	-2.05	0.72	0.764677
448	3R_DroMel_CAF1	1,708,846 – 1,708,948	- - - - - - - - -	726	1,708,846 – 1,708,948	-	5	113	89.84	-2.38	0.69	0.656387
449	3R_DroMel_CAF1	1,715,119 – 1,715,211	- - - - - - - - -	727	1,715,119 – 1,715,211	+	6	95	86.01	-1.80	0.88	0.821697
450	3R_DroMel_CAF1	1,719,446 – 1,719,549	- - - - - - - - -	728	1,719,446 – 1,719,549	-	6	117	75.47	-1.72	0.56	0.772352
451	3R_DroMel_CAF1	1,720,276 – 1,720,396	- - - - - - - - -	729	1,720,276 – 1,720,396	+	4	120	83.89	-2.67	0.66	0.957557
451	3R_DroMel_CAF1	1,720,276 – 1,720,396	- - - - - - - - -	730	1,720,276 – 1,720,396	-	4	120	83.89	-1.85	0.61	0.544683
452	3R_DroMel_CAF1	1,724,370 – 1,724,471	- - - - - - - - -	731	1,724,370 – 1,724,471	+	5	102	75.88	-1.80	0.19	0.805064
453	3R_DroMel_CAF1	1,725,767 – 1,725,878	- - - - - - - - -	732	1,725,767 – 1,725,857	+	4	90	95.37	-1.83	0.85	0.681895
				733	1,725,767 – 1,725,857	-	4	90	95.37	-1.58	0.86	0.523582
				734	1,725,782 – 1,725,878	+	6	114	77.47	-1.52	0.62	0.703178
454	3R_DroMel_CAF1	1,726,161 – 1,726,270	- - - - - - - - -	735	1,726,161 – 1,726,270	+	3	116	90.80	-2.18	0.85	0.768367
454	3R_DroMel_CAF1	1,726,161 – 1,726,270	- - - - - - - - -	736	1,726,161 – 1,726,270	-	3	116	90.80	-1.87	0.83	0.509991
455	3R_DroMel_CAF1	1,729,481 – 1,729,583	- - - "knownCDS=texon3105;Parent=CG_NCBI_GNO_32044980, CG_RGUI_GID_mRNA_40007317, CG_DGIL_SNO_28363466, CG_BATZ_CON_47008519" - - - - -	737	1,729,481 – 1,729,583	+	6	112	80.23	-1.13	0.72	0.536062
456	3R_DroMel_CAF1	1,730,872 – 1,730,976	- - - - - - - - -	738	1,730,872 – 1,730,976	-	6	112	81.56	-1.88	0.69	0.760194
457	3R_DroMel_CAF1	1,733,537 – 1,733,739	- - - - - - - - -	739	1,733,537 – 1,733,643	+	6	112	80.50	-2.30	0.58	0.814213
457	3R_DroMel_CAF1	1,733,537 – 1,733,739	- - - - - - - - -	740	1,733,643 – 1,733,739	+	5	97	68.16	-2.46	0.41	0.993247
458	3R_DroMel_CAF1	1,734,932 – 1,735,064	- - - - - - - - -	741	1,734,932 – 1,735,029	-	6	104	91.21	-2.69	0.84	0.956770
458	3R_DroMel_CAF1	1,734,932 – 1,735,064	- - - - - - - - -	742	1,734,961 – 1,735,064	-	6	109	84.32	-2.25	0.75	0.708858
459	3R_DroMel_CAF1	1,736,367 – 1,736,588	- - - - - - - - -	743	1,736,367 – 1,736,459	+	6	120	77.67	-1.36	0.82	0.879117
				744	1,736,367 – 1,736,459	-	6	120	77.67	-0.75	0.81	0.510385
				745	1,736,459 – 1,736,558	+	6	99	92.78	-1.49	0.85	0.535157
				746	1,736,497 – 1,736,588	+	5	98	86.03	-3.25	0.80	0.997975
				747	1,736,497 – 1,736,588	-	5	98	86.03	-1.97	0.85	0.939357
460	3R_DroMel_CAF1	1,739,862 – 1,739,976	- - - - - - - - -	748	1,739,862 – 1,739,976	+	6	119	78.06	-2.24	0.57	0.924665
461	3R_DroMel_CAF1	1,742,332 – 1,742,431	- - - - - - - - -	749	1,742,332 – 1,742,431	+	6	104	69.25	-1.31	0.57	0.636525
462	3R_DroMel_CAF1	1,742,458 – 1,742,549	- - - - - - - - -	750	1,742,458 – 1,742,549	+	6	104	79.96	-1.38	0.69	0.654275
463	3R_DroMel_CAF1	1,750,080 – 1,750,179	- - - - - - - - -	751	1,750,080 – 1,750,179	-	6	114	78.26	-1.44	0.62	0.601853
464	3R_DroMel_CAF1	1,750,832 – 1,750,937	- - - - - - - - -	752	1,750,832 – 1,750,937	-	3	120	83.61	-1.93	0.71	0.665351
465	3R_DroMel_CAF1	1,751,803 – 1,751,896	- - "RNAmicro=f:1751803_t:1751910_strand:+_p:0.942976" - - - - - -	753	1,751,803 – 1,751,896	-	4	108	86.31	-2.43	0.85	0.978155
466	3R_DroMel_CAF1	1,753,674 – 1,753,816	- - "RNAmicro=f:1753710_t:1753829_strand:+_p:0.925205" - - - - - -	754	1,753,674 – 1,753,790	+	3	116	81.16	-3.07	0.94	0.998576
				755	1,753,674 – 1,753,790	-	3	116	81.16	-3.61	0.82	0.997817
				756	1,753,710 – 1,753,816	+	3	120	82.78	-3.40	0.86	0.994637
				757	1,753,710 – 1,753,816	-	3	120	82.78	-4.15	0.78	0.994260
467	3R_DroMel_CAF1	1,754,926 – 1,755,040	- - - - - - - - -	758	1,754,926 – 1,755,040	-	6	120	83.06	-1.96	0.72	0.686642
468	3R_DroMel_CAF1	1,755,206 – 1,755,305	- - - - - - - - -	759	1,755,206 – 1,755,305	-	6	101	82.42	-1.75	0.71	0.657567
469	3R_DroMel_CAF1	1,757,767 – 1,757,860	- - - - - - - - -	760	1,757,767 – 1,757,860	+	6	106	79.17	-2.05	0.50	0.567696
469	3R_DroMel_CAF1	1,757,767 – 1,757,860	- - - - - - - - -	761	1,757,767 – 1,757,860	-	6	106	79.17	-1.97	0.51	0.534099
470	3R_DroMel_CAF1	1,760,129 – 1,760,224	- - - - - - - - -	762	1,760,129 – 1,760,224	-	6	97	75.00	-1.97	0.45	0.697158
471	3R_DroMel_CAF1	1,760,638 – 1,760,737	- - - - - - - - -	763	1,760,638 – 1,760,737	-	6	112	78.83	-2.18	0.59	0.901218
472	3R_DroMel_CAF1	1,763,258 – 1,763,362	- - - - - - - - -	764	1,763,258 – 1,763,362	+	6	110	74.56	-2.61	0.38	0.964268
472	3R_DroMel_CAF1	1,763,258 – 1,763,362	- - - - - - - - -	765	1,763,258 – 1,763,362	-	6	110	74.56	-2.53	0.30	0.834356
473	3R_DroMel_CAF1	1,763,898 – 1,763,994	- - - - - - - - -	766	1,763,898 – 1,763,994	+	5	96	85.16	-1.57	0.72	0.520582
474	3R_DroMel_CAF1	1,767,106 – 1,767,220	- - - - - - - - -	767	1,767,106 – 1,767,220	+	4	120	86.13	-2.03	0.78	0.884219
475	3R_DroMel_CAF1	1,768,077 – 1,768,187	- - - - - - - - -	768	1,768,077 – 1,768,187	-	4	112	81.34	-2.24	0.65	0.918864
476	3R_DroMel_CAF1	1,779,118 – 1,779,237	- - - - - - - - -	769	1,779,118 – 1,779,208	+	6	92	73.22	-2.89	0.31	0.981929
476	3R_DroMel_CAF1	1,779,118 – 1,779,237	- - - - - - - - -	770	1,779,139 – 1,779,237	+	6	102	80.30	-1.42	0.65	0.571747
477	3R_DroMel_CAF1	1,791,813 – 1,791,937	- - - - - - - - -	771	1,791,813 – 1,791,919	+	6	113	82.90	-1.41	0.91	0.663427
				772	1,791,813 – 1,791,919	-	6	113	82.90	-2.42	0.88	0.951169
				773	1,791,839 – 1,791,937	+	6	120	87.69	-1.81	0.93	0.951861
478	3R_DroMel_CAF1	1,792,635 – 1,792,743	- - - - - - - - -	774	1,792,635 – 1,792,743	+	6	116	80.58	-1.75	0.73	0.822052
478	3R_DroMel_CAF1	1,792,635 – 1,792,743	- - - - - - - - -	775	1,792,635 – 1,792,743	-	6	116	80.58	-1.42	0.66	0.585253
479	3R_DroMel_CAF1	1,796,045 – 1,796,135	- - - - - - - - -	776	1,796,045 – 1,796,135	+	6	95	80.17	-3.62	0.65	0.977606
480	3R_DroMel_CAF1	1,797,621 – 1,797,721	- - - - - - - - -	777	1,797,621 – 1,797,721	-	6	119	76.81	-2.72	0.57	0.988780
481	3R_DroMel_CAF1	1,798,898 – 1,799,012	- - - "knownCDS=Parent=FBtr0078656;Name=Pbprp3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11421-RA" - - - - -	778	1,798,898 – 1,799,012	+	6	117	81.00	-1.45	0.71	0.653557
482	3R_DroMel_CAF1	1,799,032 – 1,799,123	- - - - - - - - -	779	1,799,032 – 1,799,123	+	5	91	88.13	-2.28	0.69	0.718532
483	3R_DroMel_CAF1	1,799,429 – 1,799,549	- - - - - - - - -	780	1,799,429 – 1,799,549	+	3	120	95.56	-1.63	0.91	0.511584
484	3R_DroMel_CAF1	1,800,650 – 1,800,784	- - - - - - - - -	781	1,800,650 – 1,800,753	+	6	108	82.05	-1.89	0.67	0.693993
484	3R_DroMel_CAF1	1,800,650 – 1,800,784	- - - - - - - - -	782	1,800,684 – 1,800,784	+	6	109	81.12	-2.22	0.72	0.881959
485	3R_DroMel_CAF1	1,809,381 – 1,809,475	- - - - - - - - -	783	1,809,381 – 1,809,475	+	4	107	82.38	-3.59	0.58	0.986405
486	3R_DroMel_CAF1	1,811,109 – 1,811,202	- - - - - - - - -	784	1,811,109 – 1,811,202	+	6	110	65.45	-2.01	0.38	0.905744
486	3R_DroMel_CAF1	1,811,109 – 1,811,202	- - - - - - - - -	785	1,811,109 – 1,811,202	-	6	110	65.45	-2.39	0.44	0.988635
487	3R_DroMel_CAF1	1,817,013 – 1,817,130	- - - - - - - - -	786	1,817,013 – 1,817,113	-	6	120	80.53	-1.64	0.60	0.551802
487	3R_DroMel_CAF1	1,817,013 – 1,817,130	- - - - - - - - -	787	1,817,037 – 1,817,130	-	6	104	86.27	-1.99	0.96	0.983162
488	3R_DroMel_CAF1	1,829,339 – 1,829,453	- - - - - - - - -	788	1,829,339 – 1,829,453	+	3	120	83.61	-1.63	0.79	0.586925
489	3R_DroMel_CAF1	1,834,056 – 1,834,212	- - - "knownCDS=Parent=FBtr0078652;Name=Rm62-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10279-RA" - - - - -	789	1,834,056 – 1,834,176	+	6	120	77.65	-1.01	0.69	0.500000
489	3R_DroMel_CAF1	1,834,056 – 1,834,212		790	1,834,096 – 1,834,212	+	6	119	77.37	-1.42	0.63	0.689233
490	3R_DroMel_CAF1	1,835,852 – 1,835,958	- - - - - - - - -	791	1,835,852 – 1,835,958	+	3	120	75.35	-1.79	0.56	0.545413
490	3R_DroMel_CAF1	1,835,852 – 1,835,958	- - - - - - - - -	792	1,835,852 – 1,835,958	-	3	120	75.35	-2.25	0.59	0.972890
491	3R_DroMel_CAF1	1,854,521 – 1,854,617	- - - - - - - - -	793	1,854,521 – 1,854,617	-	5	104	80.95	-2.13	0.48	0.626148
492	3R_DroMel_CAF1	1,856,167 – 1,856,267	- - - - - - - - -	794	1,856,167 – 1,856,267	+	6	113	81.40	-1.66	0.62	0.530039
493	3R_DroMel_CAF1	1,866,717 – 1,866,823	- - - - - - - - -	795	1,866,717 – 1,866,823	+	6	106	79.75	-1.67	0.59	0.590350
493	3R_DroMel_CAF1	1,866,717 – 1,866,823	- - - - - - - - -	796	1,866,717 – 1,866,823	-	6	106	79.75	-1.50	0.65	0.667882
494	3R_DroMel_CAF1	1,870,275 – 1,870,370	- - - - - - - - -	797	1,870,275 – 1,870,370	-	6	104	79.79	-2.28	0.45	0.500000
495	3R_DroMel_CAF1	1,872,393 – 1,872,526	- - - - - - - - -	798	1,872,393 – 1,872,502	+	6	113	85.42	-2.20	0.73	0.521434
495	3R_DroMel_CAF1	1,872,393 – 1,872,526	- - - - - - - - -	799	1,872,426 – 1,872,526	+	6	116	83.60	-1.97	0.84	0.831653
496	3R_DroMel_CAF1	1,872,554 – 1,872,652	- - - - - - - - -	800	1,872,554 – 1,872,652	-	6	109	77.73	-1.19	0.67	0.587506
497	3R_DroMel_CAF1	1,872,933 – 1,873,043	- - - - - - - - -	801	1,872,933 – 1,873,043	+	6	118	87.70	-1.66	0.84	0.597810
498	3R_DroMel_CAF1	1,875,985 – 1,876,083	- - - - - - - - -	802	1,875,985 – 1,876,083	-	5	107	88.18	-1.51	0.79	0.608524
499	3R_DroMel_CAF1	1,880,658 – 1,880,763	- - - "knownCDS=Parent=FBtr0078621;Name=CG15580-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15580-RA" - - - - -	803	1,880,658 – 1,880,763	+	6	112	79.88	-1.81	0.58	0.616015
500	3R_DroMel_CAF1	1,882,406 – 1,882,513	- - - "knownCDS=Parent=FBtr0078621;Name=CG15580-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15580-RA" - - - - -	804	1,882,406 – 1,882,513	+	6	119	81.97	-2.35	0.67	0.816213
500	3R_DroMel_CAF1	1,882,406 – 1,882,513		805	1,882,406 – 1,882,513	-	6	119	81.97	-1.25	0.73	0.500000
501	3R_DroMel_CAF1	1,884,308 – 1,884,413	- - - - - - - - -	806	1,884,308 – 1,884,413	-	6	109	78.95	-1.52	0.64	0.696160
502	3R_DroMel_CAF1	1,885,113 – 1,885,206	- - - - - - - - -	807	1,885,113 – 1,885,206	-	6	98	80.28	-1.24	0.74	0.633156
503	3R_DroMel_CAF1	1,885,585 – 1,885,682	- - - - - - - - -	808	1,885,585 – 1,885,682	-	6	98	79.18	-1.86	0.74	0.913115
504	3R_DroMel_CAF1	1,886,249 – 1,886,342	- - - - - - - - -	809	1,886,249 – 1,886,342	+	6	109	73.73	-2.13	0.33	0.620280
505	3R_DroMel_CAF1	1,887,145 – 1,887,259	- - - - - - - - -	810	1,887,145 – 1,887,259	-	6	118	79.58	-1.85	0.75	0.901067
506	3R_DroMel_CAF1	1,895,596 – 1,895,701	- - - - - - - - -	811	1,895,596 – 1,895,701	-	5	113	86.72	-2.42	0.88	0.995226
507	3R_DroMel_CAF1	1,896,525 – 1,896,622	- - - - - - - - -	812	1,896,525 – 1,896,622	+	6	114	81.75	-2.18	0.66	0.784090
508	3R_DroMel_CAF1	1,898,741 – 1,898,859	- - - - - - - - -	813	1,898,741 – 1,898,831	+	6	96	77.56	-2.00	0.57	0.864397
				814	1,898,741 – 1,898,831	-	6	96	77.56	-2.05	0.54	0.853207
				815	1,898,756 – 1,898,859	+	4	110	76.97	-1.95	0.64	0.880889
				816	1,898,756 – 1,898,859	-	4	110	76.97	-1.74	0.70	0.826578
509	3R_DroMel_CAF1	1,899,998 – 1,900,095	- - - - - - - - -	817	1,899,998 – 1,900,095	-	6	110	80.50	-1.82	0.60	0.644664
510	3R_DroMel_CAF1	1,900,487 – 1,900,593	- - - - - - - - -	818	1,900,487 – 1,900,593	+	6	115	77.22	-1.58	0.58	0.647512
511	3R_DroMel_CAF1	1,900,747 – 1,900,849	- - - - - - - - -	819	1,900,747 – 1,900,849	-	6	110	82.92	-2.28	0.62	0.596586
512	3R_DroMel_CAF1	1,903,897 – 1,904,002	- - - "knownCDS=Parent=FBtr0078620;Name=Or83c-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15581-RA" - - - - -	820	1,903,897 – 1,904,002	+	6	111	82.55	-2.43	0.61	0.689935
513	3R_DroMel_CAF1	1,904,886 – 1,905,055	- - - - - - - - -	821	1,904,886 – 1,904,981	+	5	97	92.89	-2.80	0.77	0.974754
				822	1,904,886 – 1,904,981	-	5	97	92.89	-2.44	0.85	0.997523
				823	1,904,948 – 1,905,055	+	5	113	78.67	-1.99	0.62	0.869302
514	3R_DroMel_CAF1	1,907,313 – 1,907,447	- - - - - - - - -	824	1,907,313 – 1,907,419	+	6	118	81.46	-2.42	0.65	0.850066
514	3R_DroMel_CAF1	1,907,313 – 1,907,447	- - - - - - - - -	825	1,907,344 – 1,907,447	+	6	107	76.29	-2.27	0.55	0.957778
515	3R_DroMel_CAF1	1,908,615 – 1,908,705	- - - - - - - - -	826	1,908,615 – 1,908,705	+	6	112	78.59	-1.76	0.53	0.509139
516	3R_DroMel_CAF1	1,911,310 – 1,911,401	- - - - - - - - -	827	1,911,310 – 1,911,401	+	5	98	65.59	-2.04	0.38	0.851368
517	3R_DroMel_CAF1	1,911,763 – 1,911,866	- - - - - - - - -	828	1,911,763 – 1,911,866	-	4	106	75.00	-2.34	0.59	0.986044
518	3R_DroMel_CAF1	1,912,643 – 1,912,734	- - - - - - - - -	829	1,912,643 – 1,912,734	+	6	98	87.98	-2.70	0.82	0.896984
518	3R_DroMel_CAF1	1,912,643 – 1,912,734	- - - - - - - - -	830	1,912,643 – 1,912,734	-	6	98	87.98	-2.43	0.77	0.564715
519	3R_DroMel_CAF1	1,913,263 – 1,913,364	- - - - - - - - -	831	1,913,263 – 1,913,364	-	6	120	80.79	-1.13	0.73	0.517489
520	3R_DroMel_CAF1	1,914,315 – 1,914,406	- - - - - - - - -	832	1,914,315 – 1,914,406	-	3	92	74.09	-1.75	0.55	0.539340
521	3R_DroMel_CAF1	1,914,913 – 1,915,017	- - - - - - - - -	833	1,914,913 – 1,915,017	+	5	120	72.15	-1.47	0.10	0.545968
522	3R_DroMel_CAF1	1,916,975 – 1,917,095	- - - - - - - - -	834	1,916,975 – 1,917,095	+	4	120	87.92	-1.38	0.80	0.516890
522	3R_DroMel_CAF1	1,916,975 – 1,917,095	- - - - - - - - -	835	1,916,975 – 1,917,095	-	4	120	87.92	-2.01	0.79	0.868621
523	3R_DroMel_CAF1	1,921,678 – 1,921,778	- - - - - - - - -	836	1,921,678 – 1,921,778	+	6	107	77.20	-1.97	0.49	0.665048
524	3R_DroMel_CAF1	1,924,304 – 1,924,409	- - - - - - - - -	837	1,924,304 – 1,924,409	-	6	117	80.15	-2.92	0.34	0.515542
525	3R_DroMel_CAF1	1,932,608 – 1,932,715	- - - - - - - - -	838	1,932,608 – 1,932,715	+	3	107	89.06	-2.13	0.88	0.842808
526	3R_DroMel_CAF1	1,936,137 – 1,936,246	- - - - - - - - -	839	1,936,137 – 1,936,246	+	6	110	71.80	-1.91	0.55	0.948193
526	3R_DroMel_CAF1	1,936,137 – 1,936,246	- - - - - - - - -	840	1,936,137 – 1,936,246	-	6	110	71.80	-1.71	0.56	0.887846
527	3R_DroMel_CAF1	1,941,775 – 1,941,884	- - - - - - - - -	841	1,941,775 – 1,941,884	+	6	120	81.10	-1.84	0.75	0.827077
527	3R_DroMel_CAF1	1,941,775 – 1,941,884	- - - - - - - - -	842	1,941,775 – 1,941,884	-	6	120	81.10	-1.15	0.72	0.500000
528	3R_DroMel_CAF1	1,942,031 – 1,942,123	- - - - - - - - -	843	1,942,031 – 1,942,123	+	3	92	85.38	-2.17	0.93	0.972940
529	3R_DroMel_CAF1	1,943,903 – 1,943,995	- - - - - - - - -	844	1,943,903 – 1,943,995	-	6	113	74.85	-0.90	0.70	0.532179
530	3R_DroMel_CAF1	1,944,332 – 1,944,429	- - - - - - - - -	845	1,944,332 – 1,944,429	+	4	107	87.75	-1.78	0.65	0.518772
530	3R_DroMel_CAF1	1,944,332 – 1,944,429	- - - - - - - - -	846	1,944,332 – 1,944,429	-	4	107	87.75	-1.54	0.78	0.627465
531	3R_DroMel_CAF1	1,949,622 – 1,949,733	- - - - - - - - -	847	1,949,622 – 1,949,733	-	6	119	77.04	-1.66	0.59	0.757513
532	3R_DroMel_CAF1	1,949,846 – 1,949,953	- - - - - - - - -	848	1,949,846 – 1,949,953	+	3	107	83.07	-2.26	0.61	0.635952
533	3R_DroMel_CAF1	1,954,030 – 1,954,131	- - - - - - - - -	849	1,954,030 – 1,954,131	+	3	111	69.02	-2.24	0.45	0.699186
534	3R_DroMel_CAF1	1,964,429 – 1,964,533	- - - - - - - - -	850	1,964,429 – 1,964,533	-	6	105	84.28	-2.18	0.73	0.632330
535	3R_DroMel_CAF1	1,966,648 – 1,966,743	- - - - - - - - -	851	1,966,648 – 1,966,743	+	6	105	80.26	-1.77	0.68	0.803830
535	3R_DroMel_CAF1	1,966,648 – 1,966,743	- - - - - - - - -	852	1,966,648 – 1,966,743	-	6	105	80.26	-2.24	0.48	0.514976
536	3R_DroMel_CAF1	1,966,870 – 1,966,966	- - - - - - - - -	853	1,966,870 – 1,966,966	-	6	120	76.84	-1.94	0.61	0.920854
537	3R_DroMel_CAF1	1,976,978 – 1,977,077	- - - - - - - - -	854	1,976,978 – 1,977,077	-	5	100	86.60	-1.67	0.71	0.546657
538	3R_DroMel_CAF1	1,981,191 – 1,981,298	- - - - - - - - -	855	1,981,191 – 1,981,298	-	3	107	67.50	-1.48	0.56	0.697867
539	3R_DroMel_CAF1	1,995,247 – 1,995,362	- - - "knownCDS=Parent=FBtr0078587;Name=CG1077-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1077-RA" - - - - -	856	1,995,247 – 1,995,362	-	6	119	78.02	-1.64	0.57	0.605002
540	3R_DroMel_CAF1	1,996,625 – 1,996,903	- - - - - - - - -	857	1,996,625 – 1,996,729	+	5	120	66.93	-2.21	0.48	0.983231
				858	1,996,729 – 1,996,830	-	3	116	81.03	-1.72	0.77	0.759680
				859	1,996,754 – 1,996,867	+	3	113	90.56	-3.08	0.83	0.932050
				860	1,996,794 – 1,996,903	+	3	113	81.68	-0.99	0.93	0.871468
541	3R_DroMel_CAF1	2,009,162 – 2,009,270	- - - - - - - - -	861	2,009,162 – 2,009,270	+	5	118	88.43	-1.63	0.78	0.694511
541	3R_DroMel_CAF1	2,009,162 – 2,009,270	- - - - - - - - -	862	2,009,162 – 2,009,270	-	5	118	88.43	-1.42	0.84	0.619514
542	3R_DroMel_CAF1	2,012,150 – 2,012,262	- - - - - - - - -	863	2,012,150 – 2,012,262	-	3	112	92.26	-1.85	0.88	0.610195
543	3R_DroMel_CAF1	2,031,148 – 2,031,267	- - - - - - - - -	864	2,031,148 – 2,031,267	+	6	120	76.49	-2.34	0.60	0.977884
543	3R_DroMel_CAF1	2,031,148 – 2,031,267	- - - - - - - - -	865	2,031,148 – 2,031,267	-	6	120	76.49	-2.03	0.50	0.820552
544	3R_DroMel_CAF1	2,034,322 – 2,034,427	- - - - - - - - -	866	2,034,322 – 2,034,427	+	5	105	90.74	-1.53	0.84	0.809696
544	3R_DroMel_CAF1	2,034,322 – 2,034,427	- - - - - - - - -	867	2,034,322 – 2,034,427	-	5	105	90.74	-1.41	0.84	0.712678
545	3R_DroMel_CAF1	2,037,150 – 2,037,241	- - - - - - - - -	868	2,037,150 – 2,037,241	+	6	107	78.22	-1.44	0.70	0.804414
546	3R_DroMel_CAF1	2,042,456 – 2,042,608	- - - - - - - - -	869	2,042,456 – 2,042,571	-	6	115	78.89	-1.74	0.56	0.572735
				870	2,042,496 – 2,042,608	+	5	115	74.16	-2.31	0.71	0.996324
				871	2,042,496 – 2,042,608	-	5	115	74.16	-1.52	0.68	0.834683
547	3R_DroMel_CAF1	2,044,538 – 2,044,643	- - - - - - - - -	872	2,044,538 – 2,044,643	+	5	110	74.68	-1.95	0.38	0.833881
548	3R_DroMel_CAF1	2,045,971 – 2,046,091	- - - "knownCDS=Parent=FBtr0078615;Name=Osi4-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10303-RA" - - - - -	873	2,045,971 – 2,046,091	+	6	120	81.44	-2.16	0.57	0.637469
548	3R_DroMel_CAF1	2,045,971 – 2,046,091		874	2,045,971 – 2,046,091	-	6	120	81.44	-1.52	0.64	0.515080
549	3R_DroMel_CAF1	2,047,719 – 2,047,819	- - - - - - - - -	875	2,047,719 – 2,047,819	+	6	107	73.51	-1.63	0.56	0.792168
550	3R_DroMel_CAF1	2,048,437 – 2,048,542	- - - - - - - - -	876	2,048,437 – 2,048,542	-	6	120	75.27	-2.34	0.49	0.959418
551	3R_DroMel_CAF1	2,051,522 – 2,051,617	- - - - - - - - -	877	2,051,522 – 2,051,617	+	6	108	81.95	-2.68	0.66	0.867688
551	3R_DroMel_CAF1	2,051,522 – 2,051,617	- - - - - - - - -	878	2,051,522 – 2,051,617	-	6	108	81.95	-2.24	0.62	0.719210
552	3R_DroMel_CAF1	2,052,639 – 2,052,768	- - - - - - - - -	879	2,052,639 – 2,052,757	+	5	120	70.43	-1.77	0.44	0.720878
				880	2,052,639 – 2,052,757	-	5	120	70.43	-1.86	0.33	0.767380
				881	2,052,677 – 2,052,768	+	4	114	67.62	-1.60	0.53	0.755013
553	3R_DroMel_CAF1	2,060,860 – 2,060,969	- - - - - - - - -	882	2,060,860 – 2,060,969	+	5	111	81.69	-3.96	0.66	0.998793
553	3R_DroMel_CAF1	2,060,860 – 2,060,969	- - - - - - - - -	883	2,060,860 – 2,060,969	-	5	111	81.69	-3.83	0.62	0.998197
554	3R_DroMel_CAF1	2,062,510 – 2,062,611	- - - - - - - - -	884	2,062,510 – 2,062,611	+	6	107	81.31	-1.68	0.74	0.763236
555	3R_DroMel_CAF1	2,074,669 – 2,074,763	- - - - - - - - -	885	2,074,669 – 2,074,763	-	6	99	77.82	-1.77	0.60	0.806679
556	3R_DroMel_CAF1	2,076,979 – 2,077,079	- - - - - - - - -	886	2,076,979 – 2,077,079	+	6	104	74.69	-2.06	0.51	0.916990
557	3R_DroMel_CAF1	2,080,079 – 2,080,171	- - - - - - - - -	887	2,080,079 – 2,080,171	+	3	92	82.25	-3.00	0.53	0.628447
558	3R_DroMel_CAF1	2,085,163 – 2,085,275	- - - - - - - - -	888	2,085,163 – 2,085,275	-	5	120	67.71	-2.00	0.16	0.516586
559	3R_DroMel_CAF1	2,086,088 – 2,086,200	- - - - - - - - -	889	2,086,088 – 2,086,200	+	6	113	71.59	-0.93	0.66	0.517100
560	3R_DroMel_CAF1	2,091,018 – 2,091,109	- - - "knownCDS=Parent=FBtr0078600, FBtr0078601;Name=Osi10-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15593-RB, FlyBase+Annotation+IDs:CG15593-RA" - - - - -	890	2,091,018 – 2,091,109	+	6	91	88.94	-1.15	0.92	0.525001
561	3R_DroMel_CAF1	2,093,694 – 2,093,854	- - - "knownCDS=Parent=FBtr0078614;Name=Osi11-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15596-RA" - - - - -	891	2,093,694 – 2,093,814	-	6	120	84.00	-2.44	0.64	0.533130
561	3R_DroMel_CAF1	2,093,694 – 2,093,854		892	2,093,734 – 2,093,854	-	6	120	83.06	-2.34	0.67	0.705756
562	3R_DroMel_CAF1	2,094,895 – 2,095,003	- - - - - - - - -	893	2,094,895 – 2,095,003	+	5	109	91.80	-1.90	0.77	0.808550
562	3R_DroMel_CAF1	2,094,895 – 2,095,003	- - - - - - - - -	894	2,094,895 – 2,095,003	-	5	109	91.80	-1.56	0.93	0.968525
563	3R_DroMel_CAF1	2,100,005 – 2,100,135	- - - - - - - - -	895	2,100,005 – 2,100,109	+	3	104	86.54	-2.18	0.74	0.681958
563	3R_DroMel_CAF1	2,100,005 – 2,100,135	- - - - - - - - -	896	2,100,029 – 2,100,135	+	3	106	85.53	-2.46	0.73	0.826614
564	3R_DroMel_CAF1	2,101,572 – 2,101,664	- - - - - - - - -	897	2,101,572 – 2,101,664	-	5	94	69.73	-1.68	0.64	0.940321
565	3R_DroMel_CAF1	2,104,821 – 2,104,931	- - - "knownCDS=Parent=FBtr0078602;Name=Osi12-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1154-RA" - - - - -	898	2,104,821 – 2,104,931	-	6	116	78.59	-2.03	0.60	0.883822
566	3R_DroMel_CAF1	2,106,616 – 2,106,715	- - - - - - - - -	899	2,106,616 – 2,106,715	+	5	112	70.20	-1.94	0.51	0.935127
566	3R_DroMel_CAF1	2,106,616 – 2,106,715	- - - - - - - - -	900	2,106,616 – 2,106,715	-	5	112	70.20	-2.41	0.50	0.995885
567	3R_DroMel_CAF1	2,121,247 – 2,121,339	- - - - - - - - -	901	2,121,247 – 2,121,339	+	4	92	86.59	-1.47	0.69	0.527080
567	3R_DroMel_CAF1	2,121,247 – 2,121,339	- - - - - - - - -	902	2,121,247 – 2,121,339	-	4	92	86.59	-1.74	0.64	0.531694
568	3R_DroMel_CAF1	2,122,875 – 2,123,028	- - - - - - - - -	903	2,122,875 – 2,122,970	+	6	109	86.24	-2.32	0.78	0.677796
568	3R_DroMel_CAF1	2,122,875 – 2,123,028	- - - - - - - - -	904	2,122,930 – 2,123,028	+	6	115	70.96	-2.36	0.53	0.992177
569	3R_DroMel_CAF1	2,129,825 – 2,129,960	- - - - - - - - -	905	2,129,825 – 2,129,925	-	6	100	78.93	-2.05	0.66	0.918600
569	3R_DroMel_CAF1	2,129,825 – 2,129,960	- - - - - - - - -	906	2,129,865 – 2,129,960	-	6	95	72.84	-1.59	0.50	0.548148
570	3R_DroMel_CAF1	2,131,340 – 2,131,451	- - - "knownCDS=Parent=FBtr0078608;Name=Osi16-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31561-RA" - - - - -	907	2,131,340 – 2,131,451	+	6	115	79.78	-1.21	0.69	0.567644
571	3R_DroMel_CAF1	2,132,685 – 2,132,878	- - - - - - - - -	908	2,132,685 – 2,132,801	+	5	117	82.39	-2.45	0.74	0.970009
				909	2,132,723 – 2,132,841	+	5	118	83.64	-3.36	0.66	0.991260
				910	2,132,763 – 2,132,878	+	5	118	82.75	-3.91	0.67	0.997927
				911	2,132,763 – 2,132,878	-	5	118	82.75	-2.36	0.66	0.915900
572	3R_DroMel_CAF1	2,135,985 – 2,136,098	- - - "knownCDS=Parent=FBtr0078609;Name=CG31560-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31560-RA" - - - - -	912	2,135,985 – 2,136,098	+	4	113	87.02	-1.76	0.79	0.778613
573	3R_DroMel_CAF1	2,141,446 – 2,141,564	- - - - - - - - -	913	2,141,446 – 2,141,541	+	6	104	67.69	-2.75	0.28	0.982527
				914	2,141,446 – 2,141,541	-	6	104	67.69	-2.33	0.35	0.964382
				915	2,141,473 – 2,141,564	+	6	112	66.11	-1.94	0.38	0.873137
				916	2,141,473 – 2,141,564	-	6	112	66.11	-1.85	0.33	0.646276
574	3R_DroMel_CAF1	2,143,358 – 2,143,455	- - - - - - - - -	917	2,143,358 – 2,143,455	-	5	105	81.02	-1.92	0.55	0.559618
575	3R_DroMel_CAF1	2,145,259 – 2,145,357	- - - - - - - - -	918	2,145,259 – 2,145,357	+	6	102	75.83	-2.41	0.55	0.979216
575	3R_DroMel_CAF1	2,145,259 – 2,145,357	- - - - - - - - -	919	2,145,259 – 2,145,357	-	6	102	75.83	-1.21	0.68	0.722624
576	3R_DroMel_CAF1	2,146,606 – 2,146,705	- - - - - - - - -	920	2,146,606 – 2,146,705	+	6	120	80.88	-1.31	0.68	0.542387
577	3R_DroMel_CAF1	2,156,986 – 2,157,122	- - - "knownCDS=Parent=FBtr0078611;Name=Osi18-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1169-RA" - - - - -	921	2,156,986 – 2,157,100	+	6	114	89.12	-2.13	0.79	0.522055
577	3R_DroMel_CAF1	2,156,986 – 2,157,122		922	2,157,020 – 2,157,122	+	6	102	86.86	-2.66	0.74	0.577763
578	3R_DroMel_CAF1	2,158,261 – 2,158,360	- - - - - - - - -	923	2,158,261 – 2,158,360	+	4	99	83.50	-1.97	0.72	0.844849
579	3R_DroMel_CAF1	2,165,164 – 2,165,257	- - - - - - - - -	924	2,165,164 – 2,165,257	+	3	99	72.20	-2.39	0.59	0.998145
580	3R_DroMel_CAF1	2,169,315 – 2,169,419	- - - "knownCDS=Parent=FBtr0081710;Name=CG10298-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10298-RA" - - - - -	925	2,169,315 – 2,169,419	+	6	108	76.10	-1.66	0.59	0.802437
580	3R_DroMel_CAF1	2,169,315 – 2,169,419		926	2,169,315 – 2,169,419	-	6	108	76.10	-1.79	0.59	0.868223
581	3R_DroMel_CAF1	2,169,978 – 2,170,068	- - - - - - - - -	927	2,169,978 – 2,170,068	+	5	93	75.57	-1.61	0.19	0.626050
582	3R_DroMel_CAF1	2,171,980 – 2,172,097	- - - "knownCDS=Parent=FBtr0081712;Name=CG18048-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18048-RA" - - - - -	928	2,171,980 – 2,172,097	-	6	117	74.67	-2.04	0.51	0.910739
583	3R_DroMel_CAF1	2,174,406 – 2,174,526	- - - - - - - - -	929	2,174,406 – 2,174,526	+	4	120	96.25	-1.81	0.95	0.837857
583	3R_DroMel_CAF1	2,174,406 – 2,174,526	- - - - - - - - -	930	2,174,406 – 2,174,526	-	4	120	96.25	-1.76	0.96	0.828245
584	3R_DroMel_CAF1	2,177,444 – 2,177,622	- - - - - - - - -	931	2,177,444 – 2,177,549	+	5	119	84.40	-1.85	0.68	0.656952
				932	2,177,484 – 2,177,586	+	5	119	80.02	-2.03	0.58	0.783766
				933	2,177,484 – 2,177,586	-	5	119	80.02	-1.85	0.61	0.683016
				934	2,177,523 – 2,177,622	-	5	120	78.67	-2.11	0.44	0.768260
585	3R_DroMel_CAF1	2,177,659 – 2,177,779	- - - - - - - - -	935	2,177,659 – 2,177,779	-	5	120	95.83	-1.52	0.88	0.889276
586	3R_DroMel_CAF1	2,178,012 – 2,178,124	- - - - - - - - -	936	2,178,012 – 2,178,124	+	5	120	90.97	-3.52	0.84	0.999660
586	3R_DroMel_CAF1	2,178,012 – 2,178,124	- - - - - - - - -	937	2,178,012 – 2,178,124	-	5	120	90.97	-2.08	0.87	0.992793
587	3R_DroMel_CAF1	2,185,061 – 2,185,152	- - - - - - - - -	938	2,185,061 – 2,185,152	+	6	97	78.00	-1.39	0.63	0.624258
588	3R_DroMel_CAF1	2,191,627 – 2,191,730	- - - - - - - - -	939	2,191,627 – 2,191,730	+	6	112	76.39	-0.90	0.74	0.633057
589	3R_DroMel_CAF1	2,192,533 – 2,192,653	- - - "knownCDS=Parent=FBtr0081735;Name=CG33097-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33097-RA" - - - - -	940	2,192,533 – 2,192,653	-	6	120	76.28	-1.77	0.55	0.736871
590	3R_DroMel_CAF1	2,193,089 – 2,193,200	- - - "knownCDS=Parent=FBtr0081735;Name=CG33097-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33097-RA" - - - - -	941	2,193,089 – 2,193,200	+	6	111	78.34	-1.33	0.63	0.564608
591	3R_DroMel_CAF1	2,195,673 – 2,195,772	- - - "knownCDS=Parent=FBtr0081717;Name=CG10286-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10286-RA" - - - - -	942	2,195,673 – 2,195,772	-	6	99	87.00	-1.84	0.80	0.520592
592	3R_DroMel_CAF1	2,198,871 – 2,198,984	- - - "knownCDS=Parent=FBtr0081734;Name=CG1041-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1041-RA" - - - - -	943	2,198,871 – 2,198,963	+	6	108	81.30	-2.18	0.67	0.835017
592	3R_DroMel_CAF1	2,198,871 – 2,198,984		944	2,198,890 – 2,198,984	+	6	99	77.65	-2.48	0.43	0.852322
593	3R_DroMel_CAF1	2,200,394 – 2,200,513	- - - - - - - - -	945	2,200,394 – 2,200,513	+	3	120	78.69	-1.35	0.77	0.625734
594	3R_DroMel_CAF1	2,202,761 – 2,202,865	- - - "knownCDS=Parent=FBtr0081718;Name=CG10284-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10284-RA" - - - - -	946	2,202,761 – 2,202,865	+	5	104	92.69	-1.88	0.88	0.988896
595	3R_DroMel_CAF1	2,205,746 – 2,205,866	- - - "knownCDS=Parent=FBtr0081733;Name=CG1024-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1024-RA" - - - - -	947	2,205,746 – 2,205,866	+	6	120	76.83	-1.72	0.52	0.524953
596	3R_DroMel_CAF1	2,209,893 – 2,209,984	- - - - - - - - -	948	2,209,893 – 2,209,984	-	6	102	82.32	-1.84	0.74	0.739628
597	3R_DroMel_CAF1	2,215,440 – 2,215,543	- - - - - - - - -	949	2,215,440 – 2,215,543	-	6	107	79.64	-2.25	0.72	0.939538
598	3R_DroMel_CAF1	2,219,487 – 2,219,580	- - - - - - - - -	950	2,219,487 – 2,219,580	+	6	96	89.57	-2.33	0.80	0.623059
599	3R_DroMel_CAF1	2,227,145 – 2,227,284	- - - - - - - - -	951	2,227,145 – 2,227,244	-	6	102	74.72	-1.51	0.68	0.920128
599	3R_DroMel_CAF1	2,227,145 – 2,227,284	- - - - - - - - -	952	2,227,183 – 2,227,284	+	6	103	81.70	-1.77	0.65	0.628785
600	3R_DroMel_CAF1	2,228,077 – 2,228,174	- - - - - - - - -	953	2,228,077 – 2,228,174	-	4	101	82.39	-2.24	0.71	0.940603
601	3R_DroMel_CAF1	2,228,970 – 2,229,060	- - - - - - - - -	954	2,228,970 – 2,229,060	-	5	92	90.88	-1.71	0.83	0.902422
602	3R_DroMel_CAF1	2,236,642 – 2,236,748	- - - - - - - - -	955	2,236,642 – 2,236,748	+	5	108	88.39	-1.63	0.77	0.656637
603	3R_DroMel_CAF1	2,237,810 – 2,237,909	- - - - - - - - -	956	2,237,810 – 2,237,909	+	3	108	81.11	-1.54	0.79	0.664387
604	3R_DroMel_CAF1	2,250,700 – 2,250,828	- - - - - - - - -	957	2,250,700 – 2,250,799	+	5	113	84.94	-1.58	0.76	0.575282
604	3R_DroMel_CAF1	2,250,700 – 2,250,828	- - - - - - - - -	958	2,250,719 – 2,250,828	+	5	120	88.30	-2.09	0.66	0.500000
605	3R_DroMel_CAF1	2,251,778 – 2,251,894	- - - - - - - - -	959	2,251,778 – 2,251,894	+	5	116	93.33	-1.59	0.86	0.906888
605	3R_DroMel_CAF1	2,251,778 – 2,251,894	- - - - - - - - -	960	2,251,778 – 2,251,894	-	5	116	93.33	-1.19	0.91	0.682320
606	3R_DroMel_CAF1	2,252,032 – 2,252,134	- - - - - - - - -	961	2,252,032 – 2,252,134	+	5	104	85.02	-2.38	0.59	0.633290
606	3R_DroMel_CAF1	2,252,032 – 2,252,134	- - - - - - - - -	962	2,252,032 – 2,252,134	-	5	104	85.02	-2.24	0.60	0.607092
607	3R_DroMel_CAF1	2,255,858 – 2,255,975	- - - - - - - - -	963	2,255,858 – 2,255,975	+	6	120	79.52	-1.66	0.62	0.692223
608	3R_DroMel_CAF1	2,257,778 – 2,257,885	- - - - - - - - -	964	2,257,778 – 2,257,885	+	5	107	88.22	-1.56	0.79	0.643595
608	3R_DroMel_CAF1	2,257,778 – 2,257,885	- - - - - - - - -	965	2,257,778 – 2,257,885	-	5	107	88.22	-2.04	0.76	0.875124
609	3R_DroMel_CAF1	2,260,432 – 2,260,590	- - - - - - - - -	966	2,260,432 – 2,260,550	+	5	118	77.08	-2.32	0.71	0.990133
				967	2,260,432 – 2,260,550	-	5	118	77.08	-1.20	0.80	0.726922
				968	2,260,471 – 2,260,590	+	5	119	84.48	-2.08	0.73	0.861904
610	3R_DroMel_CAF1	2,263,581 – 2,263,676	- - - "knownCDS=Parent=FBtr0081725, FBtr0081726;Name=gpp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10272-RC, FlyBase+Annotation+IDs:CG10272-RD" - - - - -	969	2,263,581 – 2,263,676	-	6	111	81.62	-1.22	0.83	0.545512
611	3R_DroMel_CAF1	2,265,588 – 2,265,718	- - - "knownCDS=Parent=FBtr0081725;Name=gpp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10272-RC" - - - - -	970	2,265,588 – 2,265,691	-	6	112	75.00	-2.29	0.47	0.942769
611	3R_DroMel_CAF1	2,265,588 – 2,265,718		971	2,265,622 – 2,265,718	-	6	102	76.53	-2.39	0.47	0.929615
612	3R_DroMel_CAF1	2,265,870 – 2,265,963	- - - "knownCDS=Parent=FBtr0081725;Name=gpp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10272-RC" - - - - -	972	2,265,870 – 2,265,963	+	6	96	74.93	-2.40	0.63	0.990119
612	3R_DroMel_CAF1	2,265,870 – 2,265,963		973	2,265,870 – 2,265,963	-	6	96	74.93	-1.83	0.54	0.845842
613	3R_DroMel_CAF1	2,270,226 – 2,270,319	- - - - - - - - -	974	2,270,226 – 2,270,319	-	5	93	84.95	-2.29	0.82	0.970009
614	3R_DroMel_CAF1	2,278,600 – 2,278,694	- - - "knownCDS=Parent=FBtr0081730;Name=CG9727-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9727-RA" - - - - -	975	2,278,600 – 2,278,694	+	6	100	76.30	-1.54	0.75	0.937772
614	3R_DroMel_CAF1	2,278,600 – 2,278,694		976	2,278,600 – 2,278,694	-	6	100	76.30	-1.72	0.58	0.785748
615	3R_DroMel_CAF1	2,279,811 – 2,279,913	- - - "knownCDS=Parent=FBtr0081730;Name=CG9727-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9727-RA" - - - - -	977	2,279,811 – 2,279,913	-	6	120	75.06	-1.99	0.41	0.571007
616	3R_DroMel_CAF1	2,285,564 – 2,285,690	- - - - - - - - -	978	2,285,564 – 2,285,661	+	6	98	91.05	-2.47	0.83	0.881523
				979	2,285,564 – 2,285,661	-	6	98	91.05	-2.67	0.85	0.972863
				980	2,285,597 – 2,285,690	+	6	105	80.04	-2.39	0.62	0.907619
				981	2,285,597 – 2,285,690	-	6	105	80.04	-1.19	0.74	0.615141
617	3R_DroMel_CAF1	2,286,542 – 2,286,662	- - - - - - - - -	982	2,286,542 – 2,286,662	-	3	120	85.10	-2.18	0.71	0.707218
618	3R_DroMel_CAF1	2,291,224 – 2,291,355	- - - - - - - - -	983	2,291,224 – 2,291,315	-	3	91	89.38	-1.68	0.94	0.827054
618	3R_DroMel_CAF1	2,291,224 – 2,291,355	- - - - - - - - -	984	2,291,244 – 2,291,355	-	4	120	86.58	-1.45	0.69	0.519844
619	3R_DroMel_CAF1	2,292,117 – 2,292,267	- - - - - - - - -	985	2,292,117 – 2,292,228	-	5	120	71.38	-1.93	0.40	0.862911
619	3R_DroMel_CAF1	2,292,117 – 2,292,267	- - - - - - - - -	986	2,292,150 – 2,292,267	-	5	120	70.99	-1.69	0.30	0.526512
620	3R_DroMel_CAF1	2,292,384 – 2,292,556	- - - - - - - - -	987	2,292,384 – 2,292,491	+	5	120	76.98	-2.85	0.49	0.997503
				988	2,292,384 – 2,292,491	-	5	120	76.98	-2.69	0.48	0.994414
				989	2,292,414 – 2,292,530	+	5	120	79.42	-1.81	0.61	0.679897
				990	2,292,451 – 2,292,556	+	4	105	92.38	-2.31	0.74	0.701975
621	3R_DroMel_CAF1	2,293,577 – 2,293,697	- - - - - - - - -	991	2,293,577 – 2,293,697	+	5	120	87.92	-1.53	0.76	0.562878
622	3R_DroMel_CAF1	2,294,251 – 2,294,359	- - - - - - - - -	992	2,294,251 – 2,294,359	-	4	120	81.58	-1.66	0.66	0.574093
623	3R_DroMel_CAF1	2,298,783 – 2,298,877	- - - - - - - - -	993	2,298,783 – 2,298,877	+	6	102	80.20	-1.87	0.68	0.841066
624	3R_DroMel_CAF1	2,298,964 – 2,299,073	- - - - - - - - -	994	2,298,964 – 2,299,073	-	3	116	87.72	-1.69	0.84	0.551254
625	3R_DroMel_CAF1	2,314,659 – 2,314,751	- - - - - - - - -	995	2,314,659 – 2,314,751	-	6	93	92.17	-1.89	0.82	0.563631
626	3R_DroMel_CAF1	2,316,008 – 2,316,120	- - - "knownCDS=Parent=FBtr0081672, FBtr0081673, FBtr0081674;Name=CG15186-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15186-RA, FlyBase+Annotation+IDs:CG15186-RB, FlyBase+Annotation+IDs:CG15186-RC" - - - - -	996	2,316,008 – 2,316,120	+	6	120	79.59	-1.71	0.63	0.730285
627	3R_DroMel_CAF1	2,317,507 – 2,317,648	- - - "knownCDS=Parent=FBtr0081672, FBtr0081673;Name=CG15186-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15186-RA, FlyBase+Annotation+IDs:CG15186-RB" - - - - -	997	2,317,507 – 2,317,627	-	6	120	74.60	-2.39	0.38	0.907821
627	3R_DroMel_CAF1	2,317,507 – 2,317,648		998	2,317,547 – 2,317,648	-	6	104	75.21	-2.89	0.51	0.995192
628	3R_DroMel_CAF1	2,318,888 – 2,318,999	- - - "knownCDS=Parent=FBtr0081672, FBtr0081673, FBtr0081674;Name=CG15186-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15186-RA, FlyBase+Annotation+IDs:CG15186-RB, FlyBase+Annotation+IDs:CG15186-RC" - - - - -	999	2,318,888 – 2,318,999	-	6	111	72.13	-2.47	0.30	0.916506
629	3R_DroMel_CAF1	2,319,492 – 2,319,588	- - - "knownCDS=Parent=FBtr0081672, FBtr0081673;Name=CG15186-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15186-RA, FlyBase+Annotation+IDs:CG15186-RB" - - - - -	1000	2,319,492 – 2,319,588	+	6	96	85.83	-2.86	0.72	0.627056
630	3R_DroMel_CAF1	2,325,137 – 2,325,231	- - - - - - - - -	1001	2,325,137 – 2,325,231	-	5	94	91.38	-1.27	0.86	0.610676
631	3R_DroMel_CAF1	2,325,834 – 2,325,942	- - - - - - - - -	1002	2,325,834 – 2,325,942	-	4	108	89.81	-1.81	0.73	0.638717
632	3R_DroMel_CAF1	2,329,022 – 2,329,128	- - - - - - - - -	1003	2,329,022 – 2,329,128	-	5	115	79.57	-2.15	0.59	0.891723
633	3R_DroMel_CAF1	2,331,041 – 2,331,218	- - - - - - - - -	1004	2,331,041 – 2,331,149	+	6	120	82.58	-2.26	0.62	0.644469
				1005	2,331,075 – 2,331,188	+	6	120	86.46	-2.22	0.82	0.775104
				1006	2,331,109 – 2,331,218	+	6	120	80.46	-2.44	0.58	0.864886
634	3R_DroMel_CAF1	2,334,366 – 2,334,465	- - - - - - - - -	1007	2,334,366 – 2,334,465	-	6	120	76.34	-2.53	0.59	0.986500
635	3R_DroMel_CAF1	2,348,482 – 2,348,572	- - - - - - - - -	1008	2,348,482 – 2,348,572	+	6	94	80.51	-2.04	0.60	0.749242
636	3R_DroMel_CAF1	2,351,014 – 2,351,109	- - - - - - - - -	1009	2,351,014 – 2,351,109	+	5	117	67.19	-2.00	0.39	0.876313
636	3R_DroMel_CAF1	2,351,014 – 2,351,109	- - - - - - - - -	1010	2,351,014 – 2,351,109	-	5	117	67.19	-2.00	0.45	0.932632
637	3R_DroMel_CAF1	2,351,639 – 2,351,737	- - - - - - - - -	1011	2,351,639 – 2,351,737	-	6	105	81.09	-2.22	0.70	0.874998
638	3R_DroMel_CAF1	2,359,609 – 2,359,704	- - - - - - - - -	1012	2,359,609 – 2,359,704	-	4	108	80.85	-1.73	0.62	0.532351
639	3R_DroMel_CAF1	2,370,996 – 2,371,087	- - - - - - - - -	1013	2,370,996 – 2,371,087	+	5	93	88.96	-1.81	0.81	0.874305
640	3R_DroMel_CAF1	2,375,187 – 2,375,289	- - - "knownCDS=Parent=FBtr0081676;Name=Pif2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31483-RA" - - - - -	1014	2,375,187 – 2,375,289	+	6	120	75.25	-2.49	0.55	0.987329
641	3R_DroMel_CAF1	2,376,458 – 2,376,552	- - - - - - - - -	1015	2,376,458 – 2,376,552	-	5	96	90.50	-2.43	0.71	0.749738
642	3R_DroMel_CAF1	2,378,527 – 2,378,619	- - - - - - - - -	1016	2,378,527 – 2,378,619	-	6	105	84.03	-1.63	0.98	0.922683
643	3R_DroMel_CAF1	2,381,328 – 2,381,436	- - - - - - - - -	1017	2,381,328 – 2,381,436	+	6	117	84.50	-2.51	0.69	0.596669
643	3R_DroMel_CAF1	2,381,328 – 2,381,436	- - - - - - - - -	1018	2,381,328 – 2,381,436	-	6	117	84.50	-2.30	0.78	0.779810
644	3R_DroMel_CAF1	2,385,957 – 2,386,051	- - - - - - - - -	1019	2,385,957 – 2,386,051	+	5	101	81.69	-2.60	0.69	0.978531
644	3R_DroMel_CAF1	2,385,957 – 2,386,051	- - - - - - - - -	1020	2,385,957 – 2,386,051	-	5	101	81.69	-2.37	0.80	0.977541
645	3R_DroMel_CAF1	2,390,063 – 2,390,278	- - - - - - - - -	1021	2,390,063 – 2,390,159	-	6	119	80.05	-2.24	0.59	0.846359
645	3R_DroMel_CAF1	2,390,063 – 2,390,278	- - - - - - - - -	1022	2,390,159 – 2,390,278	+	6	120	91.34	-1.41	0.88	0.660709
646	3R_DroMel_CAF1	2,390,635 – 2,390,755	- - - - - - - - -	1023	2,390,635 – 2,390,755	-	5	120	94.50	-1.25	0.95	0.862769
647	3R_DroMel_CAF1	2,393,446 – 2,393,540	- - - - - - - - -	1024	2,393,446 – 2,393,540	-	6	120	81.82	-2.17	0.56	0.570411
648	3R_DroMel_CAF1	2,396,959 – 2,397,096	- - - - - - - - -	1025	2,396,959 – 2,397,062	+	5	105	93.45	-1.46	0.80	0.561259
				1026	2,396,959 – 2,397,062	-	5	105	93.45	-2.83	0.80	0.990993
				1027	2,396,997 – 2,397,096	+	5	101	91.78	-1.30	0.84	0.574376
				1028	2,396,997 – 2,397,096	-	5	101	91.78	-1.50	0.80	0.680429
649	3R_DroMel_CAF1	2,400,292 – 2,400,396	- - - - - - - - -	1029	2,400,292 – 2,400,396	-	6	104	98.72	-2.47	0.98	0.999919
650	3R_DroMel_CAF1	2,401,204 – 2,401,307	- - - - - - - - -	1030	2,401,204 – 2,401,307	+	6	103	95.79	-1.49	0.88	0.751987
651	3R_DroMel_CAF1	2,403,845 – 2,403,944	- - - - - - - - -	1031	2,403,845 – 2,403,944	-	5	109	89.51	-2.09	0.70	0.602938
652	3R_DroMel_CAF1	2,404,940 – 2,405,031	- - - - - - - - -	1032	2,404,940 – 2,405,031	+	6	108	82.69	-2.50	0.67	0.779015
652	3R_DroMel_CAF1	2,404,940 – 2,405,031	- - - - - - - - -	1033	2,404,940 – 2,405,031	-	6	108	82.69	-1.56	0.71	0.557497
653	3R_DroMel_CAF1	2,411,434 – 2,411,541	- - - - - - - - -	1034	2,411,434 – 2,411,541	+	6	119	89.38	-2.05	0.87	0.917352
654	3R_DroMel_CAF1	2,416,081 – 2,416,179	- - - - - - - - -	1035	2,416,081 – 2,416,179	+	6	115	82.77	-1.50	0.76	0.586000
655	3R_DroMel_CAF1	2,419,743 – 2,419,841	- - - - - - - - -	1036	2,419,743 – 2,419,841	+	6	110	85.61	-1.86	0.77	0.500000
656	3R_DroMel_CAF1	2,420,284 – 2,420,398	- - - - - - - - -	1037	2,420,284 – 2,420,398	+	6	120	81.14	-2.47	0.49	0.610729
657	3R_DroMel_CAF1	2,420,430 – 2,420,565	- - - - - - - - -	1038	2,420,430 – 2,420,532	-	6	118	82.38	-2.56	0.80	0.918877
657	3R_DroMel_CAF1	2,420,430 – 2,420,565	- - - - - - - - -	1039	2,420,455 – 2,420,565	-	6	120	79.93	-2.19	0.82	0.940312
658	3R_DroMel_CAF1	2,425,082 – 2,425,172	- - - - - - - - -	1040	2,425,082 – 2,425,172	+	5	112	76.53	-1.93	0.55	0.829115
659	3R_DroMel_CAF1	2,425,402 – 2,425,555	- - - - - - - - -	1041	2,425,402 – 2,425,516	+	6	120	74.01	-2.38	0.48	0.977987
				1042	2,425,402 – 2,425,516	-	6	120	74.01	-2.15	0.40	0.818785
				1043	2,425,436 – 2,425,555	+	4	119	93.42	-2.73	0.84	0.954318
				1044	2,425,436 – 2,425,555	-	4	119	93.42	-2.35	0.77	0.738976
660	3R_DroMel_CAF1	2,426,006 – 2,426,097	- - - "knownCDS=Parent=FBtr0081678;Name=CG31484-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31484-RA" - - - - -	1045	2,426,006 – 2,426,097	-	6	103	87.58	-2.93	0.74	0.573123
661	3R_DroMel_CAF1	2,430,709 – 2,430,849	- - - - - - - - -	1046	2,430,709 – 2,430,829	+	5	120	92.75	-1.46	0.82	0.688645
				1047	2,430,709 – 2,430,829	-	5	120	92.75	-1.25	0.84	0.523031
				1048	2,430,749 – 2,430,849	-	5	102	88.19	-1.67	0.71	0.517100
662	3R_DroMel_CAF1	2,431,960 – 2,432,079	- - - - - - - - -	1049	2,431,960 – 2,432,079	-	5	120	97.32	-1.41	0.91	0.833532
663	3R_DroMel_CAF1	2,432,822 – 2,432,936	- - - - - - - - -	1050	2,432,822 – 2,432,936	-	3	114	91.81	-2.30	0.78	0.596428
664	3R_DroMel_CAF1	2,433,125 – 2,433,312	- - - - - - - - -	1051	2,433,125 – 2,433,232	-	6	120	92.79	-1.76	0.83	0.561031
664	3R_DroMel_CAF1	2,433,125 – 2,433,312	- - - - - - - - -	1052	2,433,192 – 2,433,312	+	6	120	96.50	-1.39	0.91	0.880931
665	3R_DroMel_CAF1	2,435,093 – 2,435,213	- - - - - - - - -	1053	2,435,093 – 2,435,213	+	5	120	99.33	-1.60	0.99	0.944924
665	3R_DroMel_CAF1	2,435,093 – 2,435,213	- - - - - - - - -	1054	2,435,093 – 2,435,213	-	5	120	99.33	-1.39	0.98	0.789348
666	3R_DroMel_CAF1	2,436,454 – 2,436,573	- - - - - - - - -	1055	2,436,454 – 2,436,573	-	5	120	98.49	-1.58	0.98	0.964969
667	3R_DroMel_CAF1	2,437,108 – 2,437,298	- - - - - - - - -	1056	2,437,108 – 2,437,218	-	3	120	88.89	-1.91	0.82	0.575271
667	3R_DroMel_CAF1	2,437,108 – 2,437,298	- - - - - - - - -	1057	2,437,178 – 2,437,298	+	5	120	94.25	-1.33	0.87	0.738997
668	3R_DroMel_CAF1	2,437,705 – 2,437,964	- - - - - - - - -	1058	2,437,705 – 2,437,825	-	5	120	92.00	-2.45	0.76	0.936802
				1059	2,437,745 – 2,437,862	+	5	117	90.43	-1.36	0.80	0.509733
				1060	2,437,745 – 2,437,862	-	5	117	90.43	-3.10	0.78	0.994585
				1061	2,437,862 – 2,437,964	-	5	104	96.30	-1.20	0.93	0.692159
669	3R_DroMel_CAF1	2,438,367 – 2,438,461	- - - - - - - - -	1062	2,438,367 – 2,438,461	+	3	94	93.57	-1.32	0.97	0.518891
670	3R_DroMel_CAF1	2,438,822 – 2,438,936	- - - - - - - - -	1063	2,438,822 – 2,438,936	+	5	120	89.24	-2.28	0.69	0.689816
671	3R_DroMel_CAF1	2,439,055 – 2,439,175	- - - - - - - - -	1064	2,439,055 – 2,439,175	+	5	120	94.17	-1.33	0.88	0.769000
672	3R_DroMel_CAF1	2,439,527 – 2,439,647	- - - - - - - - -	1065	2,439,527 – 2,439,647	+	3	120	94.92	-2.17	0.82	0.553780
673	3R_DroMel_CAF1	2,441,707 – 2,441,812	- - - - - - - - -	1066	2,441,707 – 2,441,812	-	5	120	78.11	-1.74	0.61	0.671174
674	3R_DroMel_CAF1	2,444,038 – 2,444,153	- - - - - - - - -	1067	2,444,038 – 2,444,153	-	5	120	87.98	-3.05	0.62	0.692966
675	3R_DroMel_CAF1	2,445,052 – 2,445,155	- - - - - - - - -	1068	2,445,052 – 2,445,155	+	3	114	85.67	-2.02	0.72	0.608348
676	3R_DroMel_CAF1	2,445,731 – 2,445,851	- - - - - - - - -	1069	2,445,731 – 2,445,851	-	6	120	92.39	-1.53	0.85	0.571157
677	3R_DroMel_CAF1	2,450,768 – 2,450,859	- - - - - - - - -	1070	2,450,768 – 2,450,859	-	5	114	81.15	-1.99	0.59	0.716266
678	3R_DroMel_CAF1	2,450,924 – 2,451,021	- - - - - - - - -	1071	2,450,924 – 2,451,021	+	6	120	90.45	-1.25	0.94	0.811670
678	3R_DroMel_CAF1	2,450,924 – 2,451,021	- - - - - - - - -	1072	2,450,924 – 2,451,021	-	6	120	90.45	-1.97	0.93	0.991104
679	3R_DroMel_CAF1	2,455,471 – 2,455,591	- - - - - - - - -	1073	2,455,471 – 2,455,591	+	6	120	96.67	-2.93	0.91	0.999581
679	3R_DroMel_CAF1	2,455,471 – 2,455,591	- - - - - - - - -	1074	2,455,471 – 2,455,591	-	6	120	96.67	-3.23	0.98	0.999991
680	3R_DroMel_CAF1	2,455,783 – 2,455,875	- - - - - - - - -	1075	2,455,783 – 2,455,875	-	5	120	79.26	-3.03	0.68	0.997896
681	3R_DroMel_CAF1	2,456,001 – 2,456,321	- - - "knownCDS=Parent=FBtr0081681;Name=CG15179-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15179-RA" - - - - -	1076	2,456,001 – 2,456,121	+	4	120	97.50	-1.54	0.95	0.522042
				1077	2,456,121 – 2,456,241	-	4	120	97.36	-3.22	0.98	0.985271
				1078	2,456,161 – 2,456,281	+	4	120	97.78	-2.12	0.98	0.907124
				1079	2,456,201 – 2,456,321	+	4	120	96.53	-3.53	0.97	0.988293
682	3R_DroMel_CAF1	2,457,637 – 2,457,797	- - - - - - - - -	1080	2,457,637 – 2,457,757	+	4	120	95.97	-2.57	0.94	0.979924
				1081	2,457,677 – 2,457,797	+	4	120	96.39	-3.77	0.95	0.982062
				1082	2,457,677 – 2,457,797	-	4	120	96.39	-1.54	0.95	0.627127
683	3R_DroMel_CAF1	2,458,080 – 2,458,278	- - "RNAmicro=f:2458080_t:2458199_strand:+_p:0.612112" - - - - - -	1083	2,458,080 – 2,458,198	-	4	120	94.82	-2.32	0.88	0.937144
683	3R_DroMel_CAF1	2,458,080 – 2,458,278		1084	2,458,158 – 2,458,278	-	4	120	97.08	-2.06	0.96	0.906458
684	3R_DroMel_CAF1	2,459,211 – 2,459,317	- - - - - - - - -	1085	2,459,211 – 2,459,317	-	4	106	98.58	-2.60	0.95	0.923598
685	3R_DroMel_CAF1	2,460,451 – 2,460,566	- - - - - - - - -	1086	2,460,451 – 2,460,566	-	4	115	95.07	-1.67	0.93	0.794704
686	3R_DroMel_CAF1	2,462,134 – 2,462,278	- - - - - - - - -	1087	2,462,134 – 2,462,254	+	4	120	96.06	-2.12	0.93	0.925545
686	3R_DroMel_CAF1	2,462,134 – 2,462,278	- - - - - - - - -	1088	2,462,174 – 2,462,278	+	4	104	98.88	-2.92	0.96	0.935264
687	3R_DroMel_CAF1	2,462,631 – 2,462,751	- - - - - - - - -	1089	2,462,631 – 2,462,751	-	4	120	92.78	-1.51	0.85	0.601318
688	3R_DroMel_CAF1	2,463,297 – 2,463,690	- - - - - - - - -	1090	2,463,297 – 2,463,416	-	4	119	98.46	-1.90	0.99	0.779576
				1091	2,463,416 – 2,463,536	-	4	120	97.36	-1.51	0.97	0.550598
				1092	2,463,496 – 2,463,610	+	4	114	96.86	-2.22	0.99	0.960588
				1093	2,463,496 – 2,463,610	-	4	114	96.86	-1.97	1.00	0.920091
				1094	2,463,570 – 2,463,690	+	4	120	93.87	-2.53	0.92	0.984964
689	3R_DroMel_CAF1	2,464,543 – 2,464,658	- - - - - - - - -	1095	2,464,543 – 2,464,658	-	3	120	85.35	-1.98	0.68	0.533954
690	3R_DroMel_CAF1	2,466,379 – 2,466,470	- - - - - - - - -	1096	2,466,379 – 2,466,470	-	4	91	90.11	-1.90	0.72	0.633526
691	3R_DroMel_CAF1	2,466,991 – 2,467,109	- - - "knownCDS=Parent=FBtr0081682, FBtr0081683;Name=CG31286-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31286-RB, FlyBase+Annotation+IDs:CG31286-RC" - - - - -	1097	2,466,991 – 2,467,109	-	4	120	86.41	-1.36	0.84	0.509281
692	3R_DroMel_CAF1	2,469,274 – 2,469,416	- - - - - - - - -	1098	2,469,274 – 2,469,389	+	4	120	66.39	-2.10	0.43	0.804614
				1099	2,469,311 – 2,469,416	+	3	113	61.93	-2.58	0.39	0.929324
				1100	2,469,311 – 2,469,416	-	3	113	61.93	-2.39	0.39	0.840975
693	3R_DroMel_CAF1	2,469,927 – 2,470,087	- - - "knownCDS=Parent=FBtr0081699;Name=CG1315-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1315-RA" - - - - -	1101	2,469,927 – 2,470,047	+	6	120	75.40	-2.24	0.46	0.910606
				1102	2,469,927 – 2,470,047	-	6	120	75.40	-2.25	0.72	0.987187
				1103	2,469,967 – 2,470,087	+	6	120	78.67	-2.55	0.49	0.901232
				1104	2,469,967 – 2,470,087	-	6	120	78.67	-1.98	0.71	0.935548
694	3R_DroMel_CAF1	2,472,574 – 2,472,693	- - - - - - - - -	1105	2,472,574 – 2,472,693	+	5	120	84.05	-1.87	0.67	0.644093
694	3R_DroMel_CAF1	2,472,574 – 2,472,693	- - - - - - - - -	1106	2,472,574 – 2,472,693	-	5	120	84.05	-1.96	0.74	0.818678
695	3R_DroMel_CAF1	2,479,777 – 2,479,875	- - - - - - - - -	1107	2,479,777 – 2,479,875	+	6	99	80.47	-2.10	0.70	0.889916
695	3R_DroMel_CAF1	2,479,777 – 2,479,875	- - - - - - - - -	1108	2,479,777 – 2,479,875	-	6	99	80.47	-1.55	0.66	0.661871
696	3R_DroMel_CAF1	2,485,176 – 2,485,289	- - - "knownCDS=Parent=FBtr0081697;Name=agt-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1303-RA" - - - - -	1109	2,485,176 – 2,485,289	-	6	114	77.24	-2.26	0.48	0.862091
697	3R_DroMel_CAF1	2,489,048 – 2,489,140	- - - - - - - - -	1110	2,489,048 – 2,489,140	+	6	100	77.11	-0.89	0.78	0.641585
698	3R_DroMel_CAF1	2,490,282 – 2,490,379	- - - - - - - - -	1111	2,490,282 – 2,490,379	+	5	118	76.65	-1.49	0.87	0.953969
699	3R_DroMel_CAF1	2,493,184 – 2,493,287	- - - - - - - - -	1112	2,493,184 – 2,493,287	+	6	104	93.03	-3.00	0.86	0.993571
700	3R_DroMel_CAF1	2,495,424 – 2,495,519	- - - - - - - - -	1113	2,495,424 – 2,495,519	-	6	95	87.65	-2.10	0.86	0.870587
701	3R_DroMel_CAF1	2,496,824 – 2,496,918	- - - - - - - - -	1114	2,496,824 – 2,496,918	-	6	107	75.31	-1.70	0.50	0.514494
702	3R_DroMel_CAF1	2,499,165 – 2,499,264	- - - - - - - - -	1115	2,499,165 – 2,499,264	-	6	99	93.67	-2.48	0.85	0.962520
703	3R_DroMel_CAF1	2,500,663 – 2,500,769	- - - - - - - - -	1116	2,500,663 – 2,500,769	+	6	110	81.98	-2.26	0.68	0.806027
704	3R_DroMel_CAF1	2,502,831 – 2,502,922	- - - "knownCDS=Parent=FBtr0081696;Name=lab-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1264-RA" - - - - -	1117	2,502,831 – 2,502,922	+	6	105	73.02	-1.81	0.52	0.845630
705	3R_DroMel_CAF1	2,503,154 – 2,503,250	- - - "knownCDS=Parent=FBtr0081696;Name=lab-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1264-RA" - - - - -	1118	2,503,154 – 2,503,250	+	6	108	79.56	-2.16	0.58	0.838741
706	3R_DroMel_CAF1	2,503,477 – 2,503,575	- - - "knownCDS=Parent=FBtr0081696;Name=lab-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1264-RA" - - - - -	1119	2,503,477 – 2,503,575	+	5	98	81.22	-2.67	0.67	0.983258
707	3R_DroMel_CAF1	2,504,627 – 2,504,718	- - - - - - - - -	1120	2,504,627 – 2,504,718	-	5	114	77.03	-1.38	0.09	0.522673
708	3R_DroMel_CAF1	2,506,216 – 2,506,325	- - - - - - - - -	1121	2,506,216 – 2,506,325	+	5	119	73.76	-1.46	0.15	0.524275
709	3R_DroMel_CAF1	2,509,062 – 2,509,153	- - - - - - - - -	1122	2,509,062 – 2,509,153	-	6	96	79.56	-2.06	0.56	0.768270
710	3R_DroMel_CAF1	2,517,440 – 2,517,544	- - - - - - - - -	1123	2,517,440 – 2,517,544	-	6	119	78.05	-1.45	0.74	0.863095
711	3R_DroMel_CAF1	2,523,711 – 2,523,828	- - - - - - - - -	1124	2,523,711 – 2,523,812	+	3	107	76.95	-1.78	0.73	0.939439
				1125	2,523,738 – 2,523,828	+	3	94	80.81	-3.90	0.85	0.998165
				1126	2,523,738 – 2,523,828	-	3	94	80.81	-1.83	0.71	0.766795
712	3R_DroMel_CAF1	2,524,580 – 2,524,699	- - - - - - - - -	1127	2,524,580 – 2,524,699	-	5	120	96.98	-1.33	0.89	0.646760
713	3R_DroMel_CAF1	2,525,279 – 2,525,404	- - - - - - - - -	1128	2,525,279 – 2,525,370	-	5	91	98.90	-1.38	0.96	0.807323
713	3R_DroMel_CAF1	2,525,279 – 2,525,404	- - - - - - - - -	1129	2,525,290 – 2,525,404	-	5	114	97.98	-1.20	1.00	0.746555
714	3R_DroMel_CAF1	2,525,481 – 2,525,598	- - - - - - - - -	1130	2,525,481 – 2,525,598	-	5	120	86.47	-1.75	0.68	0.528214
715	3R_DroMel_CAF1	2,527,142 – 2,527,342	- - - - - - - - -	1131	2,527,142 – 2,527,262	-	5	120	87.24	-1.75	0.89	0.919199
715	3R_DroMel_CAF1	2,527,142 – 2,527,342	- - - - - - - - -	1132	2,527,222 – 2,527,342	-	5	120	95.33	-1.35	0.83	0.500000
716	3R_DroMel_CAF1	2,534,575 – 2,534,806	- - - - - - - - -	1133	2,534,575 – 2,534,693	+	3	118	73.26	-2.17	0.71	0.999215
716	3R_DroMel_CAF1	2,534,575 – 2,534,806	- - - - - - - - -	1134	2,534,693 – 2,534,806	+	5	120	79.45	-1.45	0.70	0.530364
717	3R_DroMel_CAF1	2,535,668 – 2,535,761	- - - "knownCDS=Parent=FBtr0089276, FBtr0089277, FBtr0089278, FBtr0089279;Name=pb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31481-RA, FlyBase+Annotation+IDs:CG31481-RB, FlyBase+Annotation+IDs:CG31481-RC, FlyBase+Annotation+IDs:CG31481-RD" - - - - -	1135	2,535,668 – 2,535,761	+	6	114	76.83	-1.66	0.57	0.685758
718	3R_DroMel_CAF1	2,537,642 – 2,537,748	- - - - - - - - -	1136	2,537,642 – 2,537,748	-	6	119	83.19	-1.79	0.67	0.523168
719	3R_DroMel_CAF1	2,553,920 – 2,554,021	- - - - - - - - -	1137	2,553,920 – 2,554,021	-	6	114	76.71	-1.80	0.51	0.599618
720	3R_DroMel_CAF1	2,555,191 – 2,555,286	- - - - - - - - -	1138	2,555,191 – 2,555,286	-	6	102	71.89	-1.79	0.48	0.798465
721	3R_DroMel_CAF1	2,563,188 – 2,563,287	- - - - - - - - -	1139	2,563,188 – 2,563,287	+	6	106	71.45	-1.70	0.55	0.880644
722	3R_DroMel_CAF1	2,567,021 – 2,567,112	- - - - - - - - -	1140	2,567,021 – 2,567,112	-	6	101	84.15	-1.94	0.79	0.697757
723	3R_DroMel_CAF1	2,570,444 – 2,570,562	- - - - - - - - -	1141	2,570,444 – 2,570,562	+	6	120	74.72	-1.53	0.58	0.692025
724	3R_DroMel_CAF1	2,573,786 – 2,573,876	- - - - - - - - -	1142	2,573,786 – 2,573,876	+	6	99	80.79	-1.42	0.64	0.500000
725	3R_DroMel_CAF1	2,579,088 – 2,579,182	- - - "knownCDS=Parent=FBtr0081670;Name=zen-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1046-RA" - - - - -	1143	2,579,088 – 2,579,182	-	6	96	86.06	-2.75	0.77	0.787772
726	3R_DroMel_CAF1	2,586,305 – 2,586,400	- - - - - - - - -	1144	2,586,305 – 2,586,400	+	6	114	79.64	-1.97	0.54	0.639912
727	3R_DroMel_CAF1	2,597,829 – 2,597,930	- - - - - - - - -	1145	2,597,829 – 2,597,930	-	6	101	79.87	-2.24	0.64	0.904122
728	3R_DroMel_CAF1	2,601,542 – 2,601,638	- - - - - - - - -	1146	2,601,542 – 2,601,638	+	5	113	67.70	-2.07	0.31	0.845945
728	3R_DroMel_CAF1	2,601,542 – 2,601,638	- - - - - - - - -	1147	2,601,542 – 2,601,638	-	5	113	67.70	-2.19	0.20	0.778266
729	3R_DroMel_CAF1	2,602,061 – 2,602,181	- - "RNAmicro=f:2602061_t:2602180_strand:+_p:0.994081" - "Rfam=AF321227.1/86918-86845_RF00104;mir-10;\|6e-08" - - - -	1148	2,602,061 – 2,602,181	+	6	120	87.10	-3.03	0.83	0.950173
730	3R_DroMel_CAF1	2,607,194 – 2,607,474	- - - - - - - - -	1149	2,607,194 – 2,607,314	-	4	120	94.31	-2.34	0.92	0.975858
				1150	2,607,234 – 2,607,354	-	4	120	96.11	-2.32	0.98	0.976226
				1151	2,607,314 – 2,607,434	+	4	120	95.52	-1.45	0.90	0.500000
				1152	2,607,354 – 2,607,474	+	4	120	93.28	-1.23	0.99	0.528035
731	3R_DroMel_CAF1	2,608,918 – 2,609,031	- - - - - - - - -	1153	2,608,918 – 2,609,031	-	4	120	89.30	-1.88	0.72	0.670188
732	3R_DroMel_CAF1	2,609,322 – 2,609,582	- - - - - - - - -	1154	2,609,322 – 2,609,439	+	4	120	86.33	-1.37	0.80	0.500000
				1155	2,609,402 – 2,609,502	-	4	120	83.66	-1.61	0.82	0.687469
				1156	2,609,439 – 2,609,542	+	4	120	84.17	-2.38	0.74	0.954972
				1157	2,609,439 – 2,609,542	-	4	120	84.17	-2.36	0.74	0.951271
				1158	2,609,466 – 2,609,582	+	4	120	90.88	-2.07	0.82	0.895151
733	3R_DroMel_CAF1	2,609,699 – 2,609,819	- - - - - - - - -	1159	2,609,699 – 2,609,819	+	4	120	96.25	-1.76	0.93	0.783111
734	3R_DroMel_CAF1	2,609,979 – 2,610,099	- - - - - - - - -	1160	2,609,979 – 2,610,099	+	4	120	92.50	-1.52	0.89	0.688853
734	3R_DroMel_CAF1	2,609,979 – 2,610,099	- - - - - - - - -	1161	2,609,979 – 2,610,099	-	4	120	92.50	-1.71	0.87	0.800932
735	3R_DroMel_CAF1	2,614,593 – 2,614,742	- - - - - - - - -	1162	2,614,593 – 2,614,710	+	3	117	88.54	-2.87	0.67	0.672028
				1163	2,614,630 – 2,614,742	+	3	120	88.30	-2.23	0.78	0.697937
				1164	2,614,630 – 2,614,742	-	3	120	88.30	-2.93	0.66	0.693641
736	3R_DroMel_CAF1	2,623,997 – 2,624,096	- - - - - - - - -	1165	2,623,997 – 2,624,096	+	6	114	83.42	-1.31	0.89	0.544917
736	3R_DroMel_CAF1	2,623,997 – 2,624,096	- - - - - - - - -	1166	2,623,997 – 2,624,096	-	6	114	83.42	-2.01	0.78	0.755818
737	3R_DroMel_CAF1	2,629,745 – 2,629,843	- - - - - - - - -	1167	2,629,745 – 2,629,843	+	5	114	84.03	-1.51	0.77	0.514537
738	3R_DroMel_CAF1	2,630,191 – 2,630,293	- - - - - - - - -	1168	2,630,191 – 2,630,293	+	6	120	83.59	-2.37	0.68	0.661508
738	3R_DroMel_CAF1	2,630,191 – 2,630,293	- - - - - - - - -	1169	2,630,191 – 2,630,293	-	6	120	83.59	-2.21	0.64	0.523994
739	3R_DroMel_CAF1	2,630,760 – 2,630,874	- - - - - - - - -	1170	2,630,760 – 2,630,874	-	5	114	97.89	-2.85	0.95	0.999813
740	3R_DroMel_CAF1	2,631,572 – 2,631,672	- - - - - - - - -	1171	2,631,572 – 2,631,672	+	4	109	82.35	-1.77	0.66	0.658069
741	3R_DroMel_CAF1	2,632,407 – 2,632,559	- - - - - - - - -	1172	2,632,407 – 2,632,523	-	5	120	80.62	-1.91	0.56	0.604704
741	3R_DroMel_CAF1	2,632,407 – 2,632,559	- - - - - - - - -	1173	2,632,447 – 2,632,559	-	5	120	82.58	-2.29	0.73	0.942009
742	3R_DroMel_CAF1	2,633,238 – 2,633,358	- - - - - - - - -	1174	2,633,238 – 2,633,358	+	3	120	90.56	-2.18	0.87	0.803080
743	3R_DroMel_CAF1	2,635,189 – 2,635,342	"known=stem_loop ID=Dmel\CG_RFAM_MIR_48002321;Name=dme-mir-10" - - - "Rfam=AE003673.3/31404-31329_RF00104;mir-10;\|5e-37" - "miRBase=dme-mir-10\|4e-39" - "Flybase=FBgn0082182:mir-10S:microRNA_encoding_gene\|3e-07"	1175	2,635,189 – 2,635,309	+	5	120	97.17	-2.99	0.89	0.999436
				1176	2,635,189 – 2,635,309	-	5	120	97.17	-3.00	0.94	0.999908
				1177	2,635,229 – 2,635,342	+	5	120	94.32	-1.82	0.85	0.963511
				1178	2,635,229 – 2,635,342	-	5	120	94.32	-3.55	0.88	0.999880
744	3R_DroMel_CAF1	2,635,382 – 2,635,579	- - - - - - - - -	1179	2,635,382 – 2,635,501	+	5	120	97.99	-1.36	0.94	0.822465
				1180	2,635,382 – 2,635,501	-	5	120	97.99	-2.87	0.98	0.999919
				1181	2,635,422 – 2,635,539	-	5	120	96.79	-2.29	0.85	0.988461
				1182	2,635,462 – 2,635,579	-	5	120	95.43	-2.51	0.76	0.848216
745	3R_DroMel_CAF1	2,635,962 – 2,636,082	- - - - - - - - -	1183	2,635,962 – 2,636,082	-	5	120	96.67	-1.19	0.90	0.531116
746	3R_DroMel_CAF1	2,636,619 – 2,636,848	- - - - - - - - -	1184	2,636,619 – 2,636,728	+	5	120	89.99	-2.46	0.71	0.781055
				1185	2,636,648 – 2,636,768	+	5	120	93.75	-1.72	0.80	0.782261
				1186	2,636,728 – 2,636,848	-	5	120	92.50	-1.13	0.94	0.660387
747	3R_DroMel_CAF1	2,636,925 – 2,637,042	- - - - - - - - -	1187	2,636,925 – 2,637,042	+	5	120	91.25	-2.78	0.69	0.688371
747	3R_DroMel_CAF1	2,636,925 – 2,637,042	- - - - - - - - -	1188	2,636,925 – 2,637,042	-	5	120	91.25	-2.74	0.86	0.999293
748	3R_DroMel_CAF1	2,638,397 – 2,638,516	- - - - - - - - -	1189	2,638,397 – 2,638,516	-	5	119	96.97	-1.13	0.97	0.646755
749	3R_DroMel_CAF1	2,639,660 – 2,639,778	- - - - - - - - -	1190	2,639,660 – 2,639,778	-	5	120	92.09	-1.42	0.86	0.795694
750	3R_DroMel_CAF1	2,640,122 – 2,640,242	- - - - - - - - -	1191	2,640,122 – 2,640,242	-	5	120	95.50	-1.19	0.90	0.598062
751	3R_DroMel_CAF1	2,640,544 – 2,640,642	- - - - - - - - -	1192	2,640,544 – 2,640,642	-	3	119	77.31	-2.18	0.68	0.982304
752	3R_DroMel_CAF1	2,641,954 – 2,642,185	- - - - - - - - -	1193	2,641,954 – 2,642,074	+	3	120	97.22	-2.25	0.94	0.891584
				1194	2,641,954 – 2,642,074	-	3	120	97.22	-1.81	0.99	0.849949
				1195	2,641,994 – 2,642,114	+	3	120	97.78	-1.47	0.97	0.535546
				1196	2,641,994 – 2,642,114	-	3	120	97.78	-1.69	0.98	0.742401
				1197	2,642,034 – 2,642,154	+	3	120	98.33	-2.52	0.95	0.944983
				1198	2,642,034 – 2,642,154	-	3	120	98.33	-3.99	1.01	0.992924
				1199	2,642,074 – 2,642,185	-	3	120	94.30	-2.09	0.95	0.898320
753	3R_DroMel_CAF1	2,642,941 – 2,643,091	- - - - - - - - -	1200	2,642,941 – 2,643,051	+	3	120	90.86	-2.32	0.77	0.606654
753	3R_DroMel_CAF1	2,642,941 – 2,643,091	- - - - - - - - -	1201	2,642,977 – 2,643,091	-	3	120	92.09	-2.13	0.85	0.702242
754	3R_DroMel_CAF1	2,643,813 – 2,643,973	- - - - - - - - -	1202	2,643,813 – 2,643,933	-	3	120	89.17	-1.57	0.89	0.575932
				1203	2,643,853 – 2,643,973	+	3	120	94.17	-2.71	0.87	0.908269
				1204	2,643,853 – 2,643,973	-	3	120	94.17	-2.81	0.83	0.843397
755	3R_DroMel_CAF1	2,652,165 – 2,652,263	- - - - - - - - -	1205	2,652,165 – 2,652,263	+	6	120	76.67	-1.20	0.72	0.783440
755	3R_DroMel_CAF1	2,652,165 – 2,652,263	- - - - - - - - -	1206	2,652,165 – 2,652,263	-	6	120	76.67	-2.20	0.74	0.979916
756	3R_DroMel_CAF1	2,658,219 – 2,658,318	- - - - - - - - -	1207	2,658,219 – 2,658,318	+	6	110	79.82	-1.56	0.60	0.525734
757	3R_DroMel_CAF1	2,661,694 – 2,661,793	- - - - - - - - -	1208	2,661,694 – 2,661,793	-	5	100	95.98	-1.73	0.88	0.965047
758	3R_DroMel_CAF1	2,664,152 – 2,664,243	- - - - - - - - -	1209	2,664,152 – 2,664,243	+	6	91	94.51	-2.09	0.88	0.968823
758	3R_DroMel_CAF1	2,664,152 – 2,664,243	- - - - - - - - -	1210	2,664,152 – 2,664,243	-	6	91	94.51	-1.77	0.95	0.995596
759	3R_DroMel_CAF1	2,664,838 – 2,664,977	- - - - - - - - -	1211	2,664,838 – 2,664,945	+	5	108	81.99	-1.96	0.63	0.723156
				1212	2,664,878 – 2,664,977	+	4	100	85.43	-2.55	0.60	0.756584
				1213	2,664,878 – 2,664,977	-	4	100	85.43	-1.47	0.71	0.544619
760	3R_DroMel_CAF1	2,665,111 – 2,665,213	- - - - - - - - -	1214	2,665,111 – 2,665,213	+	6	102	96.99	-0.96	0.94	0.717318
760	3R_DroMel_CAF1	2,665,111 – 2,665,213	- - - - - - - - -	1215	2,665,111 – 2,665,213	-	6	102	96.99	-0.80	0.95	0.573405
761	3R_DroMel_CAF1	2,669,302 – 2,669,416	- - - - - - - - -	1216	2,669,302 – 2,669,416	-	6	120	96.09	-1.14	0.89	0.500000
762	3R_DroMel_CAF1	2,669,434 – 2,669,534	- - - - - - - - -	1217	2,669,434 – 2,669,534	-	6	120	89.76	-2.06	0.81	0.588592
763	3R_DroMel_CAF1	2,670,254 – 2,670,351	- - - - - - - - -	1218	2,670,254 – 2,670,351	+	4	102	85.04	-1.52	0.69	0.553125
764	3R_DroMel_CAF1	2,671,326 – 2,671,418	- - - - - - - - -	1219	2,671,326 – 2,671,418	+	5	119	68.15	-1.38	0.60	0.619979
765	3R_DroMel_CAF1	2,671,586 – 2,671,680	- - - - - - - - -	1220	2,671,586 – 2,671,680	+	5	94	97.77	-1.61	0.91	0.923977
766	3R_DroMel_CAF1	2,672,524 – 2,672,632	- - - - - - - - -	1221	2,672,524 – 2,672,632	-	6	110	90.72	-2.21	0.82	0.760989
767	3R_DroMel_CAF1	2,674,138 – 2,674,238	- - - - - - - - -	1222	2,674,138 – 2,674,238	-	6	119	79.60	-1.42	0.81	0.805164
768	3R_DroMel_CAF1	2,674,396 – 2,674,488	- - - - - - - - -	1223	2,674,396 – 2,674,488	-	6	100	81.48	-2.46	0.55	0.707936
769	3R_DroMel_CAF1	2,674,527 – 2,674,645	- - - - - - - - -	1224	2,674,527 – 2,674,645	+	6	120	77.97	-2.13	0.56	0.886619
769	3R_DroMel_CAF1	2,674,527 – 2,674,645	- - - - - - - - -	1225	2,674,527 – 2,674,645	-	6	120	77.97	-1.47	0.66	0.766223
770	3R_DroMel_CAF1	2,675,872 – 2,675,973	- - - - - - - - -	1226	2,675,872 – 2,675,973	+	6	108	83.60	-2.20	0.64	0.519998
771	3R_DroMel_CAF1	2,677,052 – 2,677,168	- - - - - - - - -	1227	2,677,052 – 2,677,168	+	5	120	90.65	-1.28	0.94	0.797646
772	3R_DroMel_CAF1	2,677,207 – 2,677,340	- - - - - - - - -	1228	2,677,207 – 2,677,314	+	5	120	87.08	-2.68	0.74	0.967093
772	3R_DroMel_CAF1	2,677,207 – 2,677,340	- - - - - - - - -	1229	2,677,236 – 2,677,340	+	5	120	88.95	-1.91	0.82	0.934050
773	3R_DroMel_CAF1	2,679,009 – 2,679,103	- - - - - - - - -	1230	2,679,009 – 2,679,103	+	6	120	80.52	-1.41	0.77	0.724464
774	3R_DroMel_CAF1	2,680,018 – 2,680,159	- - - - - - - - -	1231	2,680,018 – 2,680,120	+	5	102	84.37	-3.26	0.65	0.980951
				1232	2,680,018 – 2,680,120	-	5	102	84.37	-2.78	0.59	0.869476
				1233	2,680,040 – 2,680,159	+	5	119	91.43	-2.57	0.79	0.984981
				1234	2,680,040 – 2,680,159	-	5	119	91.43	-2.46	0.76	0.939766
775	3R_DroMel_CAF1	2,681,944 – 2,682,052	- - - - - - - - -	1235	2,681,944 – 2,682,052	+	6	120	85.49	-2.84	0.69	0.559887
775	3R_DroMel_CAF1	2,681,944 – 2,682,052	- - - - - - - - -	1236	2,681,944 – 2,682,052	-	6	120	85.49	-3.24	0.81	0.946500
776	3R_DroMel_CAF1	2,682,968 – 2,683,086	- - - - - - - - -	1237	2,682,968 – 2,683,086	+	6	120	94.90	-2.00	0.83	0.650012
776	3R_DroMel_CAF1	2,682,968 – 2,683,086	- - - - - - - - -	1238	2,682,968 – 2,683,086	-	6	120	94.90	-2.04	0.92	0.994913
777	3R_DroMel_CAF1	2,683,465 – 2,683,599	- - - - - - - - -	1239	2,683,465 – 2,683,559	+	6	120	83.05	-1.94	0.73	0.693512
777	3R_DroMel_CAF1	2,683,465 – 2,683,599	- - - - - - - - -	1240	2,683,479 – 2,683,599	+	6	120	93.39	-1.93	0.83	0.693365
778	3R_DroMel_CAF1	2,685,987 – 2,686,094	- - "RNAmicro=f:2685987_t:2686106_strand:+_p:0.890312" - - - - - -	1241	2,685,987 – 2,686,094	-	6	120	83.11	-2.25	0.67	0.676491
779	3R_DroMel_CAF1	2,686,134 – 2,686,238	- - - - - - - - -	1242	2,686,134 – 2,686,238	-	6	120	81.77	-2.13	0.65	0.755642
780	3R_DroMel_CAF1	2,689,283 – 2,689,469	- - - - - - - - -	1243	2,689,283 – 2,689,394	+	5	111	86.76	-1.45	0.82	0.540746
				1244	2,689,323 – 2,689,434	-	5	120	87.61	-1.70	0.86	0.874734
				1245	2,689,354 – 2,689,469	-	5	120	92.05	-1.28	0.82	0.500000
781	3R_DroMel_CAF1	2,691,530 – 2,691,626	- - - - - - - - -	1246	2,691,530 – 2,691,626	+	6	106	76.26	-1.12	0.66	0.528652
782	3R_DroMel_CAF1	2,693,702 – 2,693,801	- - - - - - - - -	1247	2,693,702 – 2,693,801	-	6	112	81.99	-1.44	0.71	0.574074
783	3R_DroMel_CAF1	2,696,085 – 2,696,274	- - - - - - - - -	1248	2,696,085 – 2,696,182	-	6	100	88.21	-2.01	0.83	0.724171
				1249	2,696,111 – 2,696,210	-	6	106	82.45	-1.80	0.70	0.655299
				1250	2,696,182 – 2,696,274	+	5	92	93.70	-1.48	0.81	0.645456
				1251	2,696,182 – 2,696,274	-	5	92	93.70	-1.40	0.90	0.879920
784	3R_DroMel_CAF1	2,696,498 – 2,696,609	- - - - - - - - -	1252	2,696,498 – 2,696,609	-	3	116	83.33	-1.75	0.73	0.594474
785	3R_DroMel_CAF1	2,700,285 – 2,700,382	- - - - - - - - -	1253	2,700,285 – 2,700,382	-	6	120	79.53	-1.77	0.66	0.829373
786	3R_DroMel_CAF1	2,703,863 – 2,703,956	- - - - - - - - -	1254	2,703,863 – 2,703,956	-	6	103	78.01	-1.31	0.66	0.634206
787	3R_DroMel_CAF1	2,704,532 – 2,704,652	- - - "knownCDS=texon3170;Parent=CG_RGUI_GID_mRNA_40007409, CG_DGIL_SNO_28363658" - - - - -	1255	2,704,532 – 2,704,652	+	6	120	94.89	-0.92	0.92	0.500000
788	3R_DroMel_CAF1	2,706,665 – 2,706,757	- - - - - - - - -	1256	2,706,665 – 2,706,757	+	6	104	85.63	-3.08	0.67	0.545943
789	3R_DroMel_CAF1	2,707,231 – 2,707,330	- - - - - - - - -	1257	2,707,231 – 2,707,330	+	6	119	79.13	-2.01	0.58	0.816264
790	3R_DroMel_CAF1	2,707,599 – 2,707,724	- - - - - - - - -	1258	2,707,599 – 2,707,702	-	5	115	85.59	-1.68	0.74	0.617650
				1259	2,707,630 – 2,707,724	+	4	109	88.75	-1.86	0.76	0.765523
				1260	2,707,630 – 2,707,724	-	4	109	88.75	-1.74	0.74	0.684665
791	3R_DroMel_CAF1	2,709,717 – 2,709,917	- - - - - - - - -	1261	2,709,717 – 2,709,837	-	5	120	89.42	-1.82	0.73	0.651000
791	3R_DroMel_CAF1	2,709,717 – 2,709,917	- - - - - - - - -	1262	2,709,797 – 2,709,917	-	6	120	98.17	-0.89	0.97	0.799138
792	3R_DroMel_CAF1	2,712,066 – 2,712,185	- - - - - - - - -	1263	2,712,066 – 2,712,185	+	6	120	93.04	-1.83	0.84	0.658399
793	3R_DroMel_CAF1	2,713,446 – 2,713,537	- - - - - - - - -	1264	2,713,446 – 2,713,537	+	6	120	82.50	-2.04	0.77	0.811256
794	3R_DroMel_CAF1	2,713,864 – 2,713,967	- - - - - - - - -	1265	2,713,864 – 2,713,967	+	5	120	72.34	-2.17	0.38	0.969634
795	3R_DroMel_CAF1	2,715,385 – 2,715,502	- - - - - - - - -	1266	2,715,385 – 2,715,502	-	6	120	95.59	-2.35	0.90	0.995858
796	3R_DroMel_CAF1	2,715,626 – 2,715,729	- - - - - - - - -	1267	2,715,626 – 2,715,729	-	6	120	89.69	-3.60	0.73	0.727686
797	3R_DroMel_CAF1	2,716,568 – 2,716,683	- - - - - - - - -	1268	2,716,568 – 2,716,683	+	6	120	96.11	-1.11	0.95	0.901418
798	3R_DroMel_CAF1	2,717,859 – 2,718,053	- - - - - - - - -	1269	2,717,859 – 2,717,979	+	6	120	98.06	-1.85	0.92	0.988589
				1270	2,717,859 – 2,717,979	-	6	120	98.06	-3.03	0.96	0.999967
				1271	2,717,899 – 2,718,013	-	6	120	95.11	-2.27	0.82	0.783380
				1272	2,717,939 – 2,718,053	-	6	120	93.56	-2.27	0.85	0.941391
799	3R_DroMel_CAF1	2,718,793 – 2,718,883	- - - - - - - - -	1273	2,718,793 – 2,718,883	-	5	90	88.33	-1.52	0.77	0.558567
800	3R_DroMel_CAF1	2,721,411 – 2,721,531	- - - - - - - - -	1274	2,721,411 – 2,721,531	-	6	120	90.96	-2.10	0.81	0.618973
801	3R_DroMel_CAF1	2,722,028 – 2,722,138	- - - - - - - - -	1275	2,722,028 – 2,722,138	+	3	110	97.58	-2.81	0.91	0.945043
801	3R_DroMel_CAF1	2,722,028 – 2,722,138	- - - - - - - - -	1276	2,722,028 – 2,722,138	-	3	110	97.58	-2.53	0.94	0.941837
802	3R_DroMel_CAF1	2,722,528 – 2,722,647	- - - - - - - - -	1277	2,722,528 – 2,722,647	+	6	120	89.52	-2.79	0.82	0.918911
802	3R_DroMel_CAF1	2,722,528 – 2,722,647	- - - - - - - - -	1278	2,722,528 – 2,722,647	-	6	120	89.52	-1.79	0.89	0.897493
803	3R_DroMel_CAF1	2,732,841 – 2,732,949	- - - - - - - - -	1279	2,732,841 – 2,732,949	+	6	120	79.46	-1.93	0.76	0.919992
803	3R_DroMel_CAF1	2,732,841 – 2,732,949	- - - - - - - - -	1280	2,732,841 – 2,732,949	-	6	120	79.46	-1.39	0.68	0.677712
804	3R_DroMel_CAF1	2,733,903 – 2,734,064	- - - - - - - - -	1281	2,733,903 – 2,734,008	-	4	115	74.81	-2.67	0.72	0.999569
				1282	2,733,934 – 2,734,038	+	5	105	77.22	-2.27	0.62	0.976603
				1283	2,733,934 – 2,734,038	-	5	105	77.22	-3.39	0.71	0.999586
				1284	2,733,969 – 2,734,064	-	6	98	72.62	-1.91	0.43	0.746593
805	3R_DroMel_CAF1	2,734,184 – 2,734,341	- - "RNAmicro=f:2734224_t:2734343_strand:+_p:0.697934" "knownCDS=Parent=FBtr0081646;Name=Antp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1028-RH" - - - - -	1285	2,734,184 – 2,734,304	+	6	120	97.33	-0.97	0.91	0.500000
				1286	2,734,184 – 2,734,304	-	6	120	97.33	-1.66	1.00	0.999130
				1287	2,734,224 – 2,734,341	-	6	120	91.81	-2.07	0.87	0.950980
806	3R_DroMel_CAF1	2,736,437 – 2,736,544	- - - - - - - - -	1288	2,736,437 – 2,736,544	-	3	107	79.68	-1.57	0.75	0.717894
807	3R_DroMel_CAF1	2,736,803 – 2,736,904	- - - - - - - - -	1289	2,736,803 – 2,736,904	+	6	111	74.94	-1.26	0.61	0.516317
808	3R_DroMel_CAF1	2,738,602 – 2,738,709	- - "RNAmicro=f:2738602_t:2738720_strand:+_p:0.692898" - - - - - -	1290	2,738,602 – 2,738,709	-	6	119	81.04	-2.31	0.74	0.905365
809	3R_DroMel_CAF1	2,742,867 – 2,742,972	- - - - - - - - -	1291	2,742,867 – 2,742,972	+	6	105	86.70	-2.16	0.80	0.682464
810	3R_DroMel_CAF1	2,752,535 – 2,752,639	- - - - - - - - -	1292	2,752,535 – 2,752,639	+	5	109	88.81	-1.53	0.79	0.624615
811	3R_DroMel_CAF1	2,754,568 – 2,754,663	- - - - - - - - -	1293	2,754,568 – 2,754,663	+	6	108	80.20	-1.84	0.65	0.785474
812	3R_DroMel_CAF1	2,770,977 – 2,771,073	- - - - - - - - -	1294	2,770,977 – 2,771,073	+	6	120	76.99	-2.17	0.51	0.888019
812	3R_DroMel_CAF1	2,770,977 – 2,771,073	- - - - - - - - -	1295	2,770,977 – 2,771,073	-	6	120	76.99	-2.00	0.57	0.896079
813	3R_DroMel_CAF1	2,775,742 – 2,775,839	- - - - - - - - -	1296	2,775,742 – 2,775,839	-	6	98	81.59	-1.41	0.67	0.527741
814	3R_DroMel_CAF1	2,776,827 – 2,776,919	- - - - - - - - -	1297	2,776,827 – 2,776,919	+	6	107	81.85	-1.90	0.62	0.596727
815	3R_DroMel_CAF1	2,782,235 – 2,782,330	- - - - - - - - -	1298	2,782,235 – 2,782,330	+	6	109	79.88	-1.37	0.67	0.631561
816	3R_DroMel_CAF1	2,783,060 – 2,783,152	- - - - - - - - -	1299	2,783,060 – 2,783,152	+	5	100	92.73	-2.13	0.72	0.519178
817	3R_DroMel_CAF1	2,791,406 – 2,791,535	- - - - - - - - -	1300	2,791,406 – 2,791,505	+	6	100	85.69	-1.87	0.83	0.710528
817	3R_DroMel_CAF1	2,791,406 – 2,791,535	- - - - - - - - -	1301	2,791,437 – 2,791,535	+	6	99	75.56	-1.02	0.83	0.859375
818	3R_DroMel_CAF1	2,794,735 – 2,794,826	- - - - - - - - -	1302	2,794,735 – 2,794,826	+	6	116	79.67	-1.56	0.75	0.829640
819	3R_DroMel_CAF1	2,805,113 – 2,805,304	- - - - - - - - -	1303	2,805,113 – 2,805,212	-	5	116	84.44	-1.86	0.69	0.683554
819	3R_DroMel_CAF1	2,805,113 – 2,805,304	- - - - - - - - -	1304	2,805,212 – 2,805,304	-	6	116	76.80	-1.64	0.57	0.681190
820	3R_DroMel_CAF1	2,806,943 – 2,807,038	- - - - - - - - -	1305	2,806,943 – 2,807,038	+	5	95	89.74	-2.29	0.79	0.963097
821	3R_DroMel_CAF1	2,822,413 – 2,822,506	- - - - - - - - -	1306	2,822,413 – 2,822,506	+	6	103	83.13	-3.22	0.83	0.959814
821	3R_DroMel_CAF1	2,822,413 – 2,822,506	- - - - - - - - -	1307	2,822,413 – 2,822,506	-	6	103	83.13	-2.61	0.80	0.906862
822	3R_DroMel_CAF1	2,830,461 – 2,830,557	- - - - - - - - -	1308	2,830,461 – 2,830,557	+	6	98	76.30	-1.38	0.60	0.573032
823	3R_DroMel_CAF1	2,835,328 – 2,835,423	- - - - - - - - -	1309	2,835,328 – 2,835,423	+	5	95	96.84	-1.55	0.94	0.964870
824	3R_DroMel_CAF1	2,843,134 – 2,843,230	- - - - - - - - -	1310	2,843,134 – 2,843,230	+	5	96	95.21	-1.40	0.84	0.650655
825	3R_DroMel_CAF1	2,844,284 – 2,844,381	- - - - - - - - -	1311	2,844,284 – 2,844,381	+	6	100	87.13	-1.57	0.87	0.636769
826	3R_DroMel_CAF1	2,850,090 – 2,850,180	- - - - - - - - -	1312	2,850,090 – 2,850,180	+	6	99	80.41	-1.44	0.63	0.529754
827	3R_DroMel_CAF1	2,850,844 – 2,850,998	- - - - - - - - -	1313	2,850,844 – 2,850,959	-	6	120	77.89	-1.87	0.52	0.634515
827	3R_DroMel_CAF1	2,850,844 – 2,850,998	- - - - - - - - -	1314	2,850,883 – 2,850,998	-	6	120	81.48	-1.21	0.73	0.518869
828	3R_DroMel_CAF1	2,851,719 – 2,851,816	- - - - - - - - -	1315	2,851,719 – 2,851,816	+	6	109	79.97	-1.56	0.63	0.619776
829	3R_DroMel_CAF1	2,853,171 – 2,853,285	- - - - - - - - -	1316	2,853,171 – 2,853,285	+	5	114	80.37	-2.15	0.66	0.917402
830	3R_DroMel_CAF1	2,855,001 – 2,855,092	- - - - - - - - -	1317	2,855,001 – 2,855,092	-	6	91	88.34	-1.55	0.89	0.729467
831	3R_DroMel_CAF1	2,859,774 – 2,859,864	- - - - - - - - -	1318	2,859,774 – 2,859,864	+	6	90	86.59	-2.42	0.75	0.556942
832	3R_DroMel_CAF1	2,862,013 – 2,862,103	- - - - - - - - -	1319	2,862,013 – 2,862,103	+	6	98	73.01	-1.42	0.58	0.679320
833	3R_DroMel_CAF1	2,868,421 – 2,868,541	- - - - - - - - -	1320	2,868,421 – 2,868,541	-	3	120	88.73	-1.42	0.96	0.777280
834	3R_DroMel_CAF1	2,869,882 – 2,870,101	- - - - - - - - -	1321	2,869,882 – 2,869,985	-	4	120	85.41	-1.59	0.68	0.582758
				1322	2,869,922 – 2,870,025	-	4	120	82.26	-1.79	0.71	0.751558
				1323	2,869,985 – 2,870,101	+	4	120	83.33	-1.90	0.82	0.871582
835	3R_DroMel_CAF1	2,870,446 – 2,870,641	- - - - - - - - -	1324	2,870,446 – 2,870,561	-	4	120	92.59	-2.67	0.97	0.996456
				1325	2,870,486 – 2,870,601	-	4	120	94.27	-2.27	0.91	0.967420
				1326	2,870,526 – 2,870,641	+	4	120	96.36	-2.51	0.91	0.955151
836	3R_DroMel_CAF1	2,870,895 – 2,871,054	- - - - - - - - -	1327	2,870,895 – 2,871,014	-	4	120	90.97	-1.75	0.85	0.820995
836	3R_DroMel_CAF1	2,870,895 – 2,871,054	- - - - - - - - -	1328	2,870,935 – 2,871,054	-	4	120	92.78	-2.45	0.87	0.967067
837	3R_DroMel_CAF1	2,871,888 – 2,872,088	- - - - - - - - -	1329	2,871,888 – 2,872,008	-	4	120	99.17	-2.40	1.00	0.905110
				1330	2,871,928 – 2,872,048	-	4	120	100.00	-2.03	1.00	0.685145
				1331	2,871,968 – 2,872,088	-	4	120	93.31	-2.07	0.81	0.798490
838	3R_DroMel_CAF1	2,872,467 – 2,872,707	- - - - - - - - -	1332	2,872,467 – 2,872,587	+	4	120	85.57	-2.18	0.80	0.933506
				1333	2,872,507 – 2,872,627	-	4	120	90.24	-1.37	0.89	0.584824
				1334	2,872,587 – 2,872,707	+	4	120	93.31	-1.82	0.86	0.812353
839	3R_DroMel_CAF1	2,872,744 – 2,872,857	- - - - - - - - -	1335	2,872,744 – 2,872,857	+	4	120	94.42	-1.97	0.87	0.859475
840	3R_DroMel_CAF1	2,874,183 – 2,874,301	- - - - - - - - -	1336	2,874,183 – 2,874,301	+	4	120	91.60	-1.77	0.80	0.706374
840	3R_DroMel_CAF1	2,874,183 – 2,874,301	- - - - - - - - -	1337	2,874,183 – 2,874,301	-	4	120	91.60	-2.33	0.77	0.849161
841	3R_DroMel_CAF1	2,875,088 – 2,875,242	- - - - - - - - -	1338	2,875,088 – 2,875,208	+	4	120	87.97	-3.49	0.82	0.993617
				1339	2,875,088 – 2,875,208	-	4	120	87.97	-1.67	0.77	0.698703
				1340	2,875,128 – 2,875,242	+	4	120	81.62	-1.49	0.81	0.582470
842	3R_DroMel_CAF1	2,877,048 – 2,877,192	- - - - - - - - -	1341	2,877,048 – 2,877,152	-	4	120	84.12	-1.73	0.84	0.793715
842	3R_DroMel_CAF1	2,877,048 – 2,877,192	- - - - - - - - -	1342	2,877,075 – 2,877,192	+	4	120	93.81	-1.67	0.94	0.844151
843	3R_DroMel_CAF1	2,879,561 – 2,879,654	- - - "knownCDS=Parent=FBtr0081627;Name=Sodh-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1982-RA" - - - - -	1343	2,879,561 – 2,879,654	+	6	120	66.34	-1.41	0.72	0.942562
843	3R_DroMel_CAF1	2,879,561 – 2,879,654		1344	2,879,561 – 2,879,654	-	6	120	66.34	-1.28	0.64	0.831856
844	3R_DroMel_CAF1	2,880,682 – 2,880,794	- - - "knownCDS=Parent=FBtr0081628;Name=CG1979-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1979-RA" - - - - -	1345	2,880,682 – 2,880,794	-	5	120	87.07	-1.46	0.88	0.669473
845	3R_DroMel_CAF1	2,881,799 – 2,881,919	- - - "knownCDS=Parent=FBtr0081628;Name=CG1979-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1979-RA" - - - - -	1346	2,881,799 – 2,881,919	+	4	120	89.44	-1.49	0.77	0.568207
846	3R_DroMel_CAF1	2,882,470 – 2,882,590	- - - "knownCDS=Parent=FBtr0081628;Name=CG1979-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1979-RA" - - - - -	1347	2,882,470 – 2,882,590	-	4	120	86.18	-1.40	0.72	0.515573
847	3R_DroMel_CAF1	2,882,775 – 2,882,895	- - - "knownCDS=Parent=FBtr0081628;Name=CG1979-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1979-RA" - - - - -	1348	2,882,775 – 2,882,895	-	4	120	89.86	-1.45	0.77	0.520944
848	3R_DroMel_CAF1	2,883,015 – 2,883,132	- - - "knownCDS=Parent=FBtr0081628;Name=CG1979-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1979-RA" - - - - -	1349	2,883,015 – 2,883,132	-	4	120	91.14	-1.53	0.88	0.716741
849	3R_DroMel_CAF1	2,884,886 – 2,885,045	- - - - - - - - -	1350	2,884,886 – 2,885,005	+	3	119	93.00	-1.61	0.90	0.506589
				1351	2,884,886 – 2,885,005	-	3	119	93.00	-2.35	0.83	0.721963
				1352	2,884,925 – 2,885,045	+	4	120	89.72	-1.98	0.87	0.924691
850	3R_DroMel_CAF1	2,887,221 – 2,887,328	- - - "knownCDS=Parent=FBtr0081631;Name=djl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1984-RA" - - - - -	1353	2,887,221 – 2,887,328	-	3	107	82.52	-2.88	0.69	0.970397
851	3R_DroMel_CAF1	2,887,882 – 2,888,039	- - - - - - - - -	1354	2,887,882 – 2,888,002	+	3	120	85.83	-2.84	0.74	0.914487
				1355	2,887,882 – 2,888,002	-	3	120	85.83	-1.80	0.81	0.626810
				1356	2,887,922 – 2,888,039	+	3	120	86.63	-2.51	0.83	0.913699
				1357	2,887,922 – 2,888,039	-	3	120	86.63	-1.88	0.74	0.514332
852	3R_DroMel_CAF1	2,889,408 – 2,889,568	- - - "knownCDS=Parent=FBtr0081632;Name=CG1988-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1988-RA" - - - - -	1358	2,889,408 – 2,889,528	+	3	120	79.72	-2.27	0.66	0.942690
				1359	2,889,408 – 2,889,528	-	3	120	79.72	-2.39	0.75	0.983743
				1360	2,889,448 – 2,889,568	+	3	120	79.44	-2.45	0.70	0.984373
				1361	2,889,448 – 2,889,568	-	3	120	79.44	-1.77	0.74	0.846147
853	3R_DroMel_CAF1	2,890,764 – 2,890,884	- - - "knownCDS=Parent=FBtr0081645;Name=CG1105-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1105-RA" - - - - -	1362	2,890,764 – 2,890,884	-	6	120	75.38	-2.13	0.49	0.907964
854	3R_DroMel_CAF1	2,893,016 – 2,893,135	- - - - - - - - -	1363	2,893,016 – 2,893,135	-	3	120	75.00	-1.69	0.61	0.785728
855	3R_DroMel_CAF1	2,896,504 – 2,896,595	- - - - - - - - -	1364	2,896,504 – 2,896,595	-	6	93	78.81	-1.17	0.66	0.500000
856	3R_DroMel_CAF1	2,900,810 – 2,900,919	- - - - - - - - -	1365	2,900,810 – 2,900,919	+	5	120	84.63	-2.39	0.73	0.938021
857	3R_DroMel_CAF1	2,901,858 – 2,901,991	- - - - - - - - -	1366	2,901,858 – 2,901,967	-	5	120	81.43	-2.58	0.65	0.970990
				1367	2,901,889 – 2,901,991	+	5	120	79.69	-1.88	0.59	0.692540
				1368	2,901,889 – 2,901,991	-	5	120	79.69	-2.73	0.64	0.991979
858	3R_DroMel_CAF1	2,902,115 – 2,902,216	- - - - - - - - -	1369	2,902,115 – 2,902,216	+	4	120	73.41	-1.75	0.54	0.559192
859	3R_DroMel_CAF1	2,902,640 – 2,902,740	- - - "knownCDS=Parent=FBtr0081635, FBtr0081636;Name=CG1943-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1943-RA, FlyBase+Annotation+IDs:CG1943-RB" - - - - -	1370	2,902,640 – 2,902,740	-	6	120	78.38	-1.19	0.72	0.684057
860	3R_DroMel_CAF1	2,905,782 – 2,905,884	- - - "knownCDS=Parent=FBtr0081642;Name=Aly-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1101-RA" - - - - -	1371	2,905,782 – 2,905,884	+	6	105	77.97	-1.68	0.54	0.508954
861	3R_DroMel_CAF1	2,913,996 – 2,914,116	- - - "knownCDS=Parent=FBtr0081639;Name=alphaTub84B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1913-RA" - - - "ncRNAdb=MmuscAK139683_unclassifiable\|4e-22" -	1372	2,913,996 – 2,914,116	+	6	120	93.06	-1.98	0.84	0.762106
862	3R_DroMel_CAF1	2,914,276 – 2,914,416	- - - - - - - - -	1373	2,914,276 – 2,914,385	+	6	120	77.10	-2.42	0.53	0.956242
862	3R_DroMel_CAF1	2,914,276 – 2,914,416	- - - - - - - - -	1374	2,914,316 – 2,914,416	+	6	110	83.74	-2.58	0.93	0.986951
863	3R_DroMel_CAF1	2,915,117 – 2,915,207	- - - - - - - - -	1375	2,915,117 – 2,915,207	-	3	100	75.95	-4.53	0.51	0.996772
864	3R_DroMel_CAF1	2,915,277 – 2,915,384	- - - - - - - - -	1376	2,915,277 – 2,915,384	+	5	115	72.05	-2.72	0.43	0.998897
865	3R_DroMel_CAF1	2,917,734 – 2,917,845	- - - - - - - - -	1377	2,917,734 – 2,917,845	-	3	112	84.23	-2.62	0.81	0.952765
866	3R_DroMel_CAF1	2,919,433 – 2,919,541	- - - - - - - - -	1378	2,919,433 – 2,919,541	+	3	108	95.06	-2.00	0.93	0.807132
867	3R_DroMel_CAF1	2,919,659 – 2,919,754	- - - - - - - - -	1379	2,919,659 – 2,919,754	+	5	120	70.25	-1.91	0.23	0.804755
868	3R_DroMel_CAF1	2,927,954 – 2,928,133	- - - - - - - - -	1380	2,927,954 – 2,928,066	-	5	116	74.78	-2.10	0.46	0.929185
868	3R_DroMel_CAF1	2,927,954 – 2,928,133	- - - - - - - - -	1381	2,928,030 – 2,928,133	-	4	118	83.48	-1.51	0.74	0.565465
869	3R_DroMel_CAF1	2,929,007 – 2,929,100	- - - - - - - - -	1382	2,929,007 – 2,929,100	-	5	93	81.08	-2.06	0.58	0.756849
870	3R_DroMel_CAF1	2,929,426 – 2,929,527	- - - - - - - - -	1383	2,929,426 – 2,929,527	-	6	104	75.48	-1.53	0.57	0.641057
871	3R_DroMel_CAF1	2,931,373 – 2,931,466	- - - - - - - - -	1384	2,931,373 – 2,931,466	+	5	94	90.37	-1.90	0.70	0.508137
872	3R_DroMel_CAF1	2,933,214 – 2,933,344	- - - "knownCDS=Parent=FBtr0081614;Name=Alh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1070-RB" - - - - -	1385	2,933,214 – 2,933,322	+	6	108	70.33	-1.61	0.60	0.913600
872	3R_DroMel_CAF1	2,933,214 – 2,933,344		1386	2,933,248 – 2,933,344	-	6	99	74.98	-1.81	0.54	0.826657
873	3R_DroMel_CAF1	2,940,234 – 2,940,354	- - - "knownCDS=Parent=FBtr0081616, FBtr0081617;Name=Mlp84B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1019-RA, FlyBase+Annotation+IDs:CG1019-RB" - - - - -	1387	2,940,234 – 2,940,354	+	6	120	79.89	-1.57	0.64	0.658457
874	3R_DroMel_CAF1	2,947,219 – 2,947,379	- - - "knownCDS=Parent=FBtr0081612;Name=Alh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1070-RA" - - - - -	1388	2,947,219 – 2,947,339	-	6	120	90.06	-1.61	0.84	0.543777
874	3R_DroMel_CAF1	2,947,219 – 2,947,379		1389	2,947,259 – 2,947,379	-	6	120	93.22	-1.22	0.94	0.881676
875	3R_DroMel_CAF1	2,949,538 – 2,949,649	- - - - - - - - -	1390	2,949,538 – 2,949,649	+	5	111	98.02	-2.78	0.99	0.999911
875	3R_DroMel_CAF1	2,949,538 – 2,949,649	- - - - - - - - -	1391	2,949,538 – 2,949,649	-	5	111	98.02	-2.32	0.94	0.998956
876	3R_DroMel_CAF1	2,955,569 – 2,955,708	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000192;Name=Dmel_Gly_TCC_14000192;TFAMID=DmelGTCC-2955586" "tRNAscan=type:Gly:anticodon:TCC f:2955585_t:2955672_strand=+_cove=76.96" - - "Rfam=AC007803.7/2169-2240_RF00005;tRNA;\|6e-30" - - - "Flybase=FBgn0051242:CR31242:cytosolic_tRNA_gene\|1e-36"	1392	2,955,569 – 2,955,683	-	6	116	82.33	-1.48	0.87	0.699436
				1393	2,955,608 – 2,955,708	+	6	112	79.87	-1.57	0.66	0.714924
				1394	2,955,608 – 2,955,708	-	6	112	79.87	-1.99	0.67	0.878662
877	3R_DroMel_CAF1	2,972,356 – 2,972,476	- - - "knownCDS=Parent=FBtr0091512;Name=gfzf-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33546-RB" - - - - -	1395	2,972,356 – 2,972,476	+	6	120	80.39	-2.13	0.63	0.847134
878	3R_DroMel_CAF1	2,972,513 – 2,972,622	- - - "knownCDS=Parent=FBtr0091512;Name=gfzf-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33546-RB" - - - - -	1396	2,972,513 – 2,972,622	+	6	120	76.09	-1.84	0.51	0.708926
879	3R_DroMel_CAF1	2,972,962 – 2,973,052	- - - - - - - - -	1397	2,972,962 – 2,973,052	+	5	101	72.93	-1.70	0.14	0.780986
879	3R_DroMel_CAF1	2,972,962 – 2,973,052	- - - - - - - - -	1398	2,972,962 – 2,973,052	-	5	101	72.93	-1.63	0.16	0.701315
880	3R_DroMel_CAF1	2,975,626 – 2,975,743	- - - - - - - - -	1399	2,975,626 – 2,975,743	+	5	120	74.14	-1.83	0.54	0.815674
881	3R_DroMel_CAF1	2,980,938 – 2,981,035	- - - - - - - - -	1400	2,980,938 – 2,981,035	-	6	97	73.61	-1.93	0.39	0.550258
882	3R_DroMel_CAF1	2,985,422 – 2,985,518	- - - - - - - - -	1401	2,985,422 – 2,985,518	+	6	110	67.91	-2.70	0.38	0.994559
883	3R_DroMel_CAF1	2,985,673 – 2,985,767	- - - - - - - - -	1402	2,985,673 – 2,985,767	-	6	113	81.95	-2.72	0.52	0.689877
884	3R_DroMel_CAF1	2,987,334 – 2,987,431	- - - - - - - - -	1403	2,987,334 – 2,987,431	+	6	109	78.83	-1.67	0.66	0.822400
885	3R_DroMel_CAF1	2,988,954 – 2,989,047	- - - - - - - - -	1404	2,988,954 – 2,989,047	-	6	104	82.88	-1.76	0.67	0.550689
886	3R_DroMel_CAF1	2,996,567 – 2,996,657	- - - - - - - - -	1405	2,996,567 – 2,996,657	-	6	97	78.77	-1.63	0.62	0.730416
887	3R_DroMel_CAF1	3,002,015 – 3,002,112	- - - - - - - - -	1406	3,002,015 – 3,002,112	+	6	99	79.42	-1.70	0.56	0.500000
887	3R_DroMel_CAF1	3,002,015 – 3,002,112	- - - - - - - - -	1407	3,002,015 – 3,002,112	-	6	99	79.42	-1.22	0.69	0.592637
888	3R_DroMel_CAF1	3,004,791 – 3,004,911	- - - "knownCDS=Parent=FBtr0081570;Name=sas-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2507-RB" - - - - -	1408	3,004,791 – 3,004,911	+	6	120	81.72	-1.86	0.67	0.700031
889	3R_DroMel_CAF1	3,005,781 – 3,005,881	- - - "knownCDS=Parent=FBtr0081570;Name=sas-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2507-RB" - - - - -	1409	3,005,781 – 3,005,881	-	6	110	85.29	-2.62	0.80	0.861081
890	3R_DroMel_CAF1	3,006,341 – 3,006,568	- - - "knownCDS=Parent=FBtr0081570;Name=sas-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2507-RB" - - - - -	1410	3,006,341 – 3,006,454	+	5	113	74.71	-1.85	0.68	0.956535
				1411	3,006,341 – 3,006,454	-	5	113	74.71	-2.36	0.67	0.995275
				1412	3,006,454 – 3,006,568	+	6	115	76.62	-1.12	0.79	0.833719
891	3R_DroMel_CAF1	3,016,396 – 3,016,572	- - - "knownCDS=Parent=FBtr0081572;Name=lap-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2520-RA" - - - - -	1413	3,016,396 – 3,016,512	+	6	117	77.18	-1.13	0.75	0.764448
				1414	3,016,396 – 3,016,512	-	6	117	77.18	-2.62	0.67	0.986064
				1415	3,016,433 – 3,016,542	-	6	119	77.80	-2.14	0.66	0.955501
				1416	3,016,472 – 3,016,572	-	6	105	79.79	-1.89	0.65	0.840009
892	3R_DroMel_CAF1	3,017,427 – 3,017,533	- - - "knownCDS=Parent=FBtr0081572;Name=lap-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2520-RA" - - - - -	1417	3,017,427 – 3,017,533	+	6	111	79.88	-1.22	0.69	0.565047
893	3R_DroMel_CAF1	3,018,439 – 3,018,597	- - "RNAmicro=f:3018458_t:3018577_strand:+_p:0.999368" "knownCDS=Parent=FBtr0081572;Name=lap-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2520-RA" - - - - -	1418	3,018,439 – 3,018,538	+	6	119	82.73	-1.38	0.80	0.556459
				1419	3,018,458 – 3,018,578	+	6	120	90.61	-3.58	0.86	0.997122
				1420	3,018,458 – 3,018,578	-	6	120	90.61	-3.25	0.90	0.999264
				1421	3,018,498 – 3,018,597	+	6	120	82.99	-1.97	0.98	0.967626
				1422	3,018,498 – 3,018,597	-	6	120	82.99	-2.58	0.97	0.992000
894	3R_DroMel_CAF1	3,025,316 – 3,025,408	- - - - - - - - -	1423	3,025,316 – 3,025,408	+	6	104	84.03	-2.24	0.68	0.578942
895	3R_DroMel_CAF1	3,025,672 – 3,025,776	- - - - - - - - -	1424	3,025,672 – 3,025,776	+	5	104	93.65	-1.54	0.94	0.979747
896	3R_DroMel_CAF1	3,026,871 – 3,026,967	- - - "knownCDS=Parent=FBtr0081573;Name=CG14609-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14609-RA" - - - - -	1425	3,026,871 – 3,026,967	+	6	96	76.71	-1.89	0.50	0.680134
897	3R_DroMel_CAF1	3,035,691 – 3,035,805	- - - - - - - - -	1426	3,035,691 – 3,035,805	-	4	115	80.97	-2.01	0.79	0.926487
898	3R_DroMel_CAF1	3,037,242 – 3,037,343	- - - - - - - - -	1427	3,037,242 – 3,037,343	-	3	101	83.17	-2.08	0.73	0.793372
899	3R_DroMel_CAF1	3,039,029 – 3,039,125	- - - - - - - - -	1428	3,039,029 – 3,039,125	+	6	101	77.66	-1.68	0.58	0.683810
899	3R_DroMel_CAF1	3,039,029 – 3,039,125	- - - - - - - - -	1429	3,039,029 – 3,039,125	-	6	101	77.66	-2.00	0.65	0.940472
900	3R_DroMel_CAF1	3,039,266 – 3,039,359	- - - - - - - - -	1430	3,039,266 – 3,039,359	+	6	97	87.27	-3.34	0.78	0.909896
900	3R_DroMel_CAF1	3,039,266 – 3,039,359	- - - - - - - - -	1431	3,039,266 – 3,039,359	-	6	97	87.27	-3.02	0.81	0.929861
901	3R_DroMel_CAF1	3,040,581 – 3,040,688	- - - - - - - - -	1432	3,040,581 – 3,040,688	-	6	111	78.66	-1.38	0.65	0.630263
902	3R_DroMel_CAF1	3,042,612 – 3,042,704	- - - - - - - - -	1433	3,042,612 – 3,042,704	+	6	100	71.46	-2.15	0.34	0.830311
902	3R_DroMel_CAF1	3,042,612 – 3,042,704	- - - - - - - - -	1434	3,042,612 – 3,042,704	-	6	100	71.46	-1.47	0.51	0.500000
903	3R_DroMel_CAF1	3,043,676 – 3,043,783	- - - "knownCDS=Parent=FBtr0081601;Name=CG14605-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14605-RB" - - - - -	1435	3,043,676 – 3,043,783	-	6	108	78.94	-1.48	0.60	0.539215
904	3R_DroMel_CAF1	3,051,965 – 3,052,055	- - - - - - - - -	1436	3,051,965 – 3,052,055	+	5	95	87.83	-1.99	0.66	0.514174
905	3R_DroMel_CAF1	3,055,559 – 3,055,653	- - - - - - - - -	1437	3,055,559 – 3,055,653	+	6	106	80.61	-1.47	0.72	0.710818
906	3R_DroMel_CAF1	3,057,069 – 3,057,159	- - - - - - - - -	1438	3,057,069 – 3,057,159	-	6	92	81.12	-2.53	0.72	0.918724
907	3R_DroMel_CAF1	3,062,156 – 3,062,266	- - - - - - - - -	1439	3,062,156 – 3,062,266	+	6	120	81.19	-2.36	0.56	0.726339
908	3R_DroMel_CAF1	3,067,770 – 3,067,873	- - - - - - - - -	1440	3,067,770 – 3,067,873	-	6	113	75.37	-1.79	0.51	0.688059
909	3R_DroMel_CAF1	3,068,521 – 3,068,628	- - - "knownCDS=Parent=FBtr0081575;Name=CG14607-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14607-RA" - - - - -	1441	3,068,521 – 3,068,628	+	6	107	74.83	-1.91	0.44	0.614405
909	3R_DroMel_CAF1	3,068,521 – 3,068,628		1442	3,068,521 – 3,068,628	-	6	107	74.83	-1.72	0.51	0.629969
910	3R_DroMel_CAF1	3,070,822 – 3,070,919	- - - - - - - - -	1443	3,070,822 – 3,070,919	-	6	97	81.44	-2.19	0.64	0.792757
911	3R_DroMel_CAF1	3,072,134 – 3,072,251	- - - "knownCDS=Parent=FBtr0081599;Name=CG1234-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1234-RA" - - - - -	1444	3,072,134 – 3,072,251	-	6	117	73.32	-2.29	0.39	0.921389
912	3R_DroMel_CAF1	3,073,793 – 3,073,903	- - - - - - - - -	1445	3,073,793 – 3,073,903	+	6	116	77.47	-0.89	0.80	0.642900
913	3R_DroMel_CAF1	3,076,035 – 3,076,155	- - - "knownCDS=Parent=FBtr0081577;Name=CG10050-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10050-RA" - - - - -	1446	3,076,035 – 3,076,155	+	6	120	78.33	-2.50	0.57	0.956011
914	3R_DroMel_CAF1	3,078,412 – 3,078,545	- - - - - - - - -	1447	3,078,412 – 3,078,505	-	6	108	79.77	-1.27	0.67	0.552825
914	3R_DroMel_CAF1	3,078,412 – 3,078,545	- - - - - - - - -	1448	3,078,442 – 3,078,545	-	6	120	78.70	-1.07	0.70	0.549053
915	3R_DroMel_CAF1	3,083,675 – 3,083,799	- - - - - - - - -	1449	3,083,675 – 3,083,772	+	6	98	94.59	-1.75	0.83	0.556766
				1450	3,083,675 – 3,083,772	-	6	98	94.59	-2.48	0.88	0.991689
				1451	3,083,709 – 3,083,799	-	6	104	80.42	-1.96	0.65	0.818566
916	3R_DroMel_CAF1	3,103,054 – 3,103,163	- - - "knownCDS=Parent=FBtr0081594;Name=rn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32466-RB" - - - - -	1452	3,103,054 – 3,103,163	-	6	111	78.33	-1.73	0.66	0.871585
917	3R_DroMel_CAF1	3,107,073 – 3,107,164	- - - - - - - - -	1453	3,107,073 – 3,107,164	+	5	96	74.61	-1.64	0.56	0.575194
918	3R_DroMel_CAF1	3,108,199 – 3,108,294	- - - - - - - - -	1454	3,108,199 – 3,108,294	+	6	102	82.28	-2.88	0.60	0.829982
918	3R_DroMel_CAF1	3,108,199 – 3,108,294	- - - - - - - - -	1455	3,108,199 – 3,108,294	-	6	102	82.28	-3.07	0.60	0.860929
919	3R_DroMel_CAF1	3,109,485 – 3,109,604	- - - - - - - - -	1456	3,109,485 – 3,109,604	+	3	120	89.74	-1.98	0.95	0.927432
919	3R_DroMel_CAF1	3,109,485 – 3,109,604	- - - - - - - - -	1457	3,109,485 – 3,109,604	-	3	120	89.74	-1.44	0.94	0.668453
920	3R_DroMel_CAF1	3,109,644 – 3,109,764	- - - - - - - - -	1458	3,109,644 – 3,109,764	+	3	120	98.33	-1.63	0.94	0.575079
920	3R_DroMel_CAF1	3,109,644 – 3,109,764	- - - - - - - - -	1459	3,109,644 – 3,109,764	-	3	120	98.33	-2.97	0.94	0.971886
921	3R_DroMel_CAF1	3,110,179 – 3,110,287	- - - - - - - - -	1460	3,110,179 – 3,110,287	+	3	120	91.11	-1.95	0.83	0.573915
922	3R_DroMel_CAF1	3,110,476 – 3,110,591	- - - - - - - - -	1461	3,110,476 – 3,110,591	-	3	120	90.70	-1.22	0.96	0.516615
923	3R_DroMel_CAF1	3,110,705 – 3,110,811	- - - - - - - - -	1462	3,110,705 – 3,110,811	-	3	120	78.36	-1.95	0.61	0.777825
924	3R_DroMel_CAF1	3,111,155 – 3,111,275	- - - - - - - - -	1463	3,111,155 – 3,111,275	-	3	120	98.33	-1.92	0.96	0.812309
925	3R_DroMel_CAF1	3,112,219 – 3,112,317	- - - - - - - - -	1464	3,112,219 – 3,112,317	-	3	105	87.01	-1.80	0.83	0.602833
926	3R_DroMel_CAF1	3,113,788 – 3,113,884	- - - - - - - - -	1465	3,113,788 – 3,113,884	+	6	120	83.37	-1.92	0.70	0.610671
927	3R_DroMel_CAF1	3,114,432 – 3,114,548	- - - - - - - - -	1466	3,114,432 – 3,114,548	-	6	120	89.44	-1.79	0.91	0.939279
928	3R_DroMel_CAF1	3,115,955 – 3,116,057	- - - - - - - - -	1467	3,115,955 – 3,116,057	+	4	112	87.09	-3.45	0.71	0.968280
928	3R_DroMel_CAF1	3,115,955 – 3,116,057	- - - - - - - - -	1468	3,115,955 – 3,116,057	-	4	112	87.09	-3.51	0.61	0.811603
929	3R_DroMel_CAF1	3,116,827 – 3,116,917	- - - - - - - - -	1469	3,116,827 – 3,116,917	-	5	91	95.91	-1.75	0.93	0.991544
930	3R_DroMel_CAF1	3,117,676 – 3,117,812	- - - "knownCDS=Parent=FBtr0081593;Name=rn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32466-RA" - - - - -	1470	3,117,676 – 3,117,772	-	6	120	78.62	-2.30	0.71	0.961602
930	3R_DroMel_CAF1	3,117,676 – 3,117,812		1471	3,117,713 – 3,117,812	-	6	120	82.77	-2.36	0.72	0.798431
931	3R_DroMel_CAF1	3,118,094 – 3,118,257	- - - "knownCDS=Parent=FBtr0081593;Name=rn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32466-RA" - - - - -	1472	3,118,094 – 3,118,196	-	6	120	81.27	-1.28	0.78	0.598034
				1473	3,118,156 – 3,118,257	+	6	120	81.40	-2.85	0.69	0.924127
				1474	3,118,156 – 3,118,257	-	6	120	81.40	-2.52	0.66	0.882140
932	3R_DroMel_CAF1	3,118,761 – 3,118,918	- - - - - - - - -	1475	3,118,761 – 3,118,863	+	5	102	95.88	-1.54	0.86	0.831120
				1476	3,118,788 – 3,118,900	+	5	112	97.68	-2.01	0.95	0.996910
				1477	3,118,788 – 3,118,900	-	5	112	97.68	-1.98	0.95	0.996453
				1478	3,118,823 – 3,118,918	+	5	95	97.68	-1.69	0.99	0.990120
				1479	3,118,823 – 3,118,918	-	5	95	97.68	-2.61	0.98	0.999876
933	3R_DroMel_CAF1	3,119,215 – 3,119,459	- - - - - - - - -	1480	3,119,215 – 3,119,323	+	5	111	85.28	-2.40	0.57	0.532060
				1481	3,119,215 – 3,119,323	-	5	111	85.28	-2.76	0.56	0.671214
				1482	3,119,246 – 3,119,357	+	4	114	88.72	-2.63	0.82	0.975967
				1483	3,119,286 – 3,119,397	+	5	114	84.18	-2.66	0.75	0.981943
				1484	3,119,286 – 3,119,397	-	5	114	84.18	-2.71	0.64	0.931385
				1485	3,119,357 – 3,119,459	+	5	102	94.90	-1.43	0.89	0.874410
934	3R_DroMel_CAF1	3,119,769 – 3,119,874	- - - - - - - - -	1486	3,119,769 – 3,119,874	-	4	114	81.74	-1.88	0.62	0.656837
935	3R_DroMel_CAF1	3,120,123 – 3,120,237	- - - "knownCDS=Parent=FBtr0081593;Name=rn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32466-RA" - - - - -	1487	3,120,123 – 3,120,237	+	5	114	95.08	-1.80	0.89	0.983226
936	3R_DroMel_CAF1	3,120,917 – 3,121,141	- - - - - - - - -	1488	3,120,917 – 3,121,013	+	6	120	79.81	-2.04	0.60	0.820724
				1489	3,120,952 – 3,121,044	-	5	95	92.23	-4.26	0.74	0.985034
				1490	3,121,044 – 3,121,141	+	6	120	79.90	-2.23	0.79	0.939996
				1491	3,121,044 – 3,121,141	-	6	120	79.90	-2.74	0.66	0.956387
937	3R_DroMel_CAF1	3,121,855 – 3,121,945	- - - - - - - - -	1492	3,121,855 – 3,121,945	+	3	102	70.57	-3.80	0.72	1.000000
938	3R_DroMel_CAF1	3,122,335 – 3,122,633	- - - - - - - - -	1493	3,122,335 – 3,122,443	+	6	120	89.46	-1.66	0.89	0.860042
				1494	3,122,375 – 3,122,479	+	4	116	94.55	-1.39	0.90	0.500000
				1495	3,122,443 – 3,122,543	+	5	100	99.00	-3.08	0.97	0.999779
				1496	3,122,443 – 3,122,543	-	5	100	99.00	-2.71	0.97	0.999627
				1497	3,122,543 – 3,122,633	-	3	90	98.52	-2.21	0.97	0.928054
939	3R_DroMel_CAF1	3,122,778 – 3,122,911	- - - - - - - - -	1498	3,122,778 – 3,122,872	+	4	100	90.81	-1.57	0.86	0.718376
				1499	3,122,810 – 3,122,911	+	6	103	82.65	-4.21	0.79	0.967954
				1500	3,122,810 – 3,122,911	-	6	103	82.65	-3.36	0.79	0.949750
940	3R_DroMel_CAF1	3,123,098 – 3,123,210	- - - - - - - - -	1501	3,123,098 – 3,123,210	-	6	120	82.14	-3.14	0.42	0.562338
941	3R_DroMel_CAF1	3,123,344 – 3,123,451	- - - - - - - - -	1502	3,123,344 – 3,123,451	-	5	120	91.06	-1.91	0.71	0.512307
942	3R_DroMel_CAF1	3,123,660 – 3,123,814	- - - - - - - - -	1503	3,123,660 – 3,123,776	-	5	117	92.01	-2.52	0.84	0.997074
942	3R_DroMel_CAF1	3,123,660 – 3,123,814	- - - - - - - - -	1504	3,123,697 – 3,123,814	-	4	119	86.26	-1.83	0.82	0.833995
943	3R_DroMel_CAF1	3,124,515 – 3,124,634	- - - - - - - - -	1505	3,124,515 – 3,124,634	+	5	120	95.32	-1.95	0.91	0.995903
943	3R_DroMel_CAF1	3,124,515 – 3,124,634	- - - - - - - - -	1506	3,124,515 – 3,124,634	-	5	120	95.32	-2.12	0.93	0.999102
944	3R_DroMel_CAF1	3,124,665 – 3,124,945	- - - - - - - - -	1507	3,124,665 – 3,124,785	-	5	120	96.33	-1.46	0.89	0.848911
				1508	3,124,705 – 3,124,825	-	5	120	96.33	-1.42	0.91	0.883482
				1509	3,124,825 – 3,124,945	+	5	120	93.95	-2.64	0.87	0.999317
945	3R_DroMel_CAF1	3,125,098 – 3,125,213	- - - - - - - - -	1510	3,125,098 – 3,125,213	+	5	120	93.76	-1.76	0.89	0.983291
946	3R_DroMel_CAF1	3,125,312 – 3,125,432	- - - - - - - - -	1511	3,125,312 – 3,125,432	+	5	120	75.74	-2.02	0.45	0.852250
946	3R_DroMel_CAF1	3,125,312 – 3,125,432	- - - - - - - - -	1512	3,125,312 – 3,125,432	-	5	120	75.74	-2.19	0.47	0.947009
947	3R_DroMel_CAF1	3,126,392 – 3,126,509	- - - "knownCDS=Parent=FBtr0081593;Name=rn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32466-RA" - - - - -	1513	3,126,392 – 3,126,509	-	6	120	92.37	-1.90	0.89	0.962185
948	3R_DroMel_CAF1	3,126,812 – 3,126,947	- - - - - - - - -	1514	3,126,812 – 3,126,918	-	4	106	90.25	-1.34	0.89	0.566024
948	3R_DroMel_CAF1	3,126,812 – 3,126,947	- - - - - - - - -	1515	3,126,838 – 3,126,947	-	4	109	96.79	-1.71	0.94	0.724941
949	3R_DroMel_CAF1	3,127,760 – 3,127,861	- - - "knownCDS=Parent=FBtr0081595;Name=CG32467-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32467-RA" - - - - -	1516	3,127,760 – 3,127,861	+	4	101	94.06	-2.03	0.94	0.954067
950	3R_DroMel_CAF1	3,130,395 – 3,130,507	- - - - - - - - -	1517	3,130,395 – 3,130,507	-	5	112	93.72	-1.58	0.89	0.955509
951	3R_DroMel_CAF1	3,131,360 – 3,131,480	- - - - - - - - -	1518	3,131,360 – 3,131,480	+	5	120	76.92	-1.91	0.45	0.667745
951	3R_DroMel_CAF1	3,131,360 – 3,131,480	- - - - - - - - -	1519	3,131,360 – 3,131,480	-	5	120	76.92	-2.26	0.48	0.946273
952	3R_DroMel_CAF1	3,132,524 – 3,132,655	- - - - - - - - -	1520	3,132,524 – 3,132,624	-	6	120	76.66	-2.67	0.52	0.983960
				1521	3,132,561 – 3,132,655	+	6	120	73.17	-4.09	0.33	0.998656
				1522	3,132,561 – 3,132,655	-	6	120	73.17	-3.48	0.45	0.999156
953	3R_DroMel_CAF1	3,135,207 – 3,135,435	- - - - - - - - -	1523	3,135,207 – 3,135,297	+	4	90	99.44	-4.23	1.00	0.889150
				1524	3,135,207 – 3,135,297	-	4	90	99.44	-2.15	0.99	0.808365
				1525	3,135,258 – 3,135,363	+	4	105	98.57	-2.06	1.00	0.858630
				1526	3,135,258 – 3,135,363	-	4	105	98.57	-2.11	0.97	0.850230
				1527	3,135,297 – 3,135,403	+	4	106	99.06	-2.65	0.99	0.933932
				1528	3,135,325 – 3,135,435	+	6	120	92.64	-2.06	0.82	0.634477
954	3R_DroMel_CAF1	3,135,694 – 3,135,847	- - - - - - - - -	1529	3,135,694 – 3,135,807	-	4	120	96.14	-1.89	0.90	0.790705
954	3R_DroMel_CAF1	3,135,694 – 3,135,847	- - - - - - - - -	1530	3,135,734 – 3,135,847	-	4	120	94.42	-1.61	0.87	0.644984
955	3R_DroMel_CAF1	3,137,098 – 3,137,251	- - - - - - - - -	1531	3,137,098 – 3,137,211	-	6	120	75.75	-1.48	0.62	0.759889
955	3R_DroMel_CAF1	3,137,098 – 3,137,251	- - - - - - - - -	1532	3,137,134 – 3,137,251	-	6	120	77.05	-2.33	0.60	0.971063
956	3R_DroMel_CAF1	3,138,020 – 3,138,131	- - - - - - - - -	1533	3,138,020 – 3,138,131	-	3	118	72.62	-1.49	0.61	0.670181
957	3R_DroMel_CAF1	3,138,658 – 3,138,757	- - - "knownCDS=Parent=FBtr0081592;Name=CG32468-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32468-RA" - - - - -	1534	3,138,658 – 3,138,757	+	4	107	89.89	-1.53	0.80	0.611363
958	3R_DroMel_CAF1	3,140,333 – 3,140,433	- - - - - - - - -	1535	3,140,333 – 3,140,433	-	4	100	95.00	-3.32	0.89	0.977152
959	3R_DroMel_CAF1	3,140,533 – 3,140,627	- - - "knownCDS=Parent=FBtr0081592;Name=CG32468-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32468-RA" - - - - -	1536	3,140,533 – 3,140,627	+	4	94	98.94	-2.51	0.90	0.794227
960	3R_DroMel_CAF1	3,144,218 – 3,144,325	- - - - - - - - -	1537	3,144,218 – 3,144,325	-	4	108	88.99	-1.57	0.70	0.523899
961	3R_DroMel_CAF1	3,147,976 – 3,148,073	- - - - - - - - -	1538	3,147,976 – 3,148,073	+	4	97	89.86	-1.86	0.77	0.756553
961	3R_DroMel_CAF1	3,147,976 – 3,148,073	- - - - - - - - -	1539	3,147,976 – 3,148,073	-	4	97	89.86	-1.90	0.68	0.527902
962	3R_DroMel_CAF1	3,149,488 – 3,149,584	- - - - - - - - -	1540	3,149,488 – 3,149,584	+	4	98	80.94	-2.40	0.58	0.876098
963	3R_DroMel_CAF1	3,151,524 – 3,151,643	- - - - - - - - -	1541	3,151,524 – 3,151,643	+	6	120	97.21	-1.24	0.93	0.897425
964	3R_DroMel_CAF1	3,153,639 – 3,153,757	- - - - - - - - -	1542	3,153,639 – 3,153,757	+	3	120	78.00	-1.91	0.65	0.883904
965	3R_DroMel_CAF1	3,153,924 – 3,154,037	- - - - - - - - -	1543	3,153,924 – 3,154,037	-	4	120	92.56	-1.85	0.86	0.853227
966	3R_DroMel_CAF1	3,154,077 – 3,154,346	- - - - - - - - -	1544	3,154,077 – 3,154,197	+	4	120	93.19	-1.37	0.90	0.542141
				1545	3,154,077 – 3,154,197	-	4	120	93.19	-1.66	0.81	0.585688
				1546	3,154,197 – 3,154,307	+	4	120	87.61	-1.78	0.88	0.867985
				1547	3,154,197 – 3,154,307	-	4	120	87.61	-2.49	0.87	0.984307
				1548	3,154,235 – 3,154,346	+	4	120	88.65	-2.11	0.84	0.935271
				1549	3,154,235 – 3,154,346	-	4	120	88.65	-2.49	0.78	0.941583
967	3R_DroMel_CAF1	3,154,456 – 3,154,575	- - - - - - - - -	1550	3,154,456 – 3,154,575	+	4	120	92.89	-2.79	0.77	0.835036
968	3R_DroMel_CAF1	3,157,031 – 3,157,150	- - - - - - - - -	1551	3,157,031 – 3,157,150	+	4	120	92.59	-1.91	0.75	0.569462
969	3R_DroMel_CAF1	3,157,227 – 3,157,384	- - - - - - - - -	1552	3,157,227 – 3,157,347	+	4	120	91.67	-2.02	0.82	0.864723
969	3R_DroMel_CAF1	3,157,227 – 3,157,384	- - - - - - - - -	1553	3,157,267 – 3,157,384	+	4	120	94.80	-2.06	0.80	0.617776
970	3R_DroMel_CAF1	3,157,608 – 3,157,723	- - - - - - - - -	1554	3,157,608 – 3,157,723	-	4	120	91.21	-1.78	0.85	0.824444
971	3R_DroMel_CAF1	3,157,809 – 3,158,049	- - - - - - - - -	1555	3,157,809 – 3,157,929	-	4	120	91.81	-1.80	0.94	0.931417
				1556	3,157,849 – 3,157,969	-	4	120	96.11	-2.16	0.92	0.925039
				1557	3,157,889 – 3,158,009	+	4	120	95.42	-2.79	0.90	0.974026
				1558	3,157,889 – 3,158,009	-	4	120	95.42	-3.05	0.87	0.962507
				1559	3,157,929 – 3,158,049	+	4	120	95.00	-2.18	0.84	0.835935
972	3R_DroMel_CAF1	3,158,912 – 3,159,023	- - - - - - - - -	1560	3,158,912 – 3,159,023	-	4	120	92.21	-1.51	0.86	0.631741
973	3R_DroMel_CAF1	3,159,223 – 3,159,380	- - - - - - - - -	1561	3,159,223 – 3,159,343	+	4	120	96.81	-2.49	0.96	0.970592
				1562	3,159,223 – 3,159,343	-	4	120	96.81	-2.46	0.95	0.966477
				1563	3,159,263 – 3,159,380	+	4	120	94.66	-2.70	0.90	0.980266
				1564	3,159,263 – 3,159,380	-	4	120	94.66	-1.99	0.86	0.844432
974	3R_DroMel_CAF1	3,159,420 – 3,159,534	- - - - - - - - -	1565	3,159,420 – 3,159,534	+	4	120	91.24	-1.87	0.88	0.901895
974	3R_DroMel_CAF1	3,159,420 – 3,159,534	- - - - - - - - -	1566	3,159,420 – 3,159,534	-	4	120	91.24	-1.72	0.87	0.825963
975	3R_DroMel_CAF1	3,159,733 – 3,159,973	- - - - - - - - -	1567	3,159,733 – 3,159,853	+	4	120	90.69	-1.44	0.78	0.500000
975	3R_DroMel_CAF1	3,159,733 – 3,159,973	- - - - - - - - -	1568	3,159,853 – 3,159,973	+	4	120	94.09	-1.30	0.95	0.505996
976	3R_DroMel_CAF1	3,160,749 – 3,160,984	- - - - - - - - -	1569	3,160,749 – 3,160,864	+	5	120	93.79	-1.36	0.88	0.795141
				1570	3,160,825 – 3,160,944	+	5	120	97.50	-1.48	0.95	0.939133
				1571	3,160,825 – 3,160,944	-	5	120	97.50	-1.30	0.92	0.730569
				1572	3,160,864 – 3,160,984	-	5	120	93.83	-1.78	0.84	0.946461
977	3R_DroMel_CAF1	3,161,314 – 3,161,501	- - - - - - - - -	1573	3,161,314 – 3,161,421	-	5	120	84.67	-2.16	0.70	0.843938
977	3R_DroMel_CAF1	3,161,314 – 3,161,501	- - - - - - - - -	1574	3,161,381 – 3,161,501	-	5	120	94.75	-1.79	0.88	0.981716
978	3R_DroMel_CAF1	3,161,828 – 3,161,946	- - - - - - - - -	1575	3,161,828 – 3,161,946	+	5	120	90.49	-2.54	0.79	0.985394
979	3R_DroMel_CAF1	3,162,137 – 3,162,257	- - - - - - - - -	1576	3,162,137 – 3,162,257	+	5	120	96.42	-2.14	0.92	0.998277
979	3R_DroMel_CAF1	3,162,137 – 3,162,257	- - - - - - - - -	1577	3,162,137 – 3,162,257	-	5	120	96.42	-1.67	0.96	0.991372
980	3R_DroMel_CAF1	3,162,417 – 3,162,577	- - - - - - - - -	1578	3,162,417 – 3,162,537	-	4	120	76.18	-1.77	0.67	0.835223
				1579	3,162,457 – 3,162,577	+	5	120	77.83	-1.78	0.69	0.860797
				1580	3,162,457 – 3,162,577	-	5	120	77.83	-3.16	0.79	0.999034
981	3R_DroMel_CAF1	3,162,617 – 3,162,771	- - - - - - - - -	1581	3,162,617 – 3,162,735	-	5	120	95.12	-1.10	0.94	0.616025
981	3R_DroMel_CAF1	3,162,617 – 3,162,771	- - - - - - - - -	1582	3,162,655 – 3,162,771	-	5	120	94.13	-1.90	0.91	0.996056
982	3R_DroMel_CAF1	3,163,243 – 3,163,523	- - - - - - - - -	1583	3,163,243 – 3,163,363	+	5	120	96.83	-1.88	0.98	0.997939
				1584	3,163,243 – 3,163,363	-	5	120	96.83	-2.88	0.94	0.999918
				1585	3,163,323 – 3,163,443	+	5	120	95.83	-2.16	0.95	0.999476
				1586	3,163,403 – 3,163,523	+	5	120	95.25	-1.50	0.82	0.600732
983	3R_DroMel_CAF1	3,164,355 – 3,164,475	- - - - - - - - -	1587	3,164,355 – 3,164,475	-	5	120	94.00	-1.22	0.92	0.760496
984	3R_DroMel_CAF1	3,165,130 – 3,165,289	- - - - - - - - -	1588	3,165,130 – 3,165,250	+	4	120	95.56	-2.63	0.85	0.909007
				1589	3,165,130 – 3,165,250	-	4	120	95.56	-2.33	0.92	0.959908
				1590	3,165,170 – 3,165,289	-	4	120	92.19	-2.09	0.84	0.902918
985	3R_DroMel_CAF1	3,165,802 – 3,166,068	- - - - - - - - -	1591	3,165,802 – 3,165,922	-	5	120	96.25	-1.52	0.95	0.970520
				1592	3,165,842 – 3,165,962	+	5	120	92.36	-1.39	0.90	0.883108
				1593	3,165,962 – 3,166,068	+	5	120	79.69	-2.14	0.54	0.831101
986	3R_DroMel_CAF1	3,166,621 – 3,166,741	- - - - - - - - -	1594	3,166,621 – 3,166,741	-	3	120	97.22	-2.44	0.87	0.809454
987	3R_DroMel_CAF1	3,166,781 – 3,166,935	- - - - - - - - -	1595	3,166,781 – 3,166,895	+	3	120	92.66	-1.51	0.95	0.610439
				1596	3,166,781 – 3,166,895	-	3	120	92.66	-1.91	0.88	0.646087
				1597	3,166,821 – 3,166,935	+	3	120	92.66	-1.80	0.93	0.760994
988	3R_DroMel_CAF1	3,167,848 – 3,168,008	- - - - - - - - -	1598	3,167,848 – 3,167,968	+	4	120	99.17	-2.95	1.00	0.949254
				1599	3,167,848 – 3,167,968	-	4	120	99.17	-1.97	1.00	0.754575
				1600	3,167,888 – 3,168,008	+	4	120	96.60	-1.59	0.95	0.666323
				1601	3,167,888 – 3,168,008	-	4	120	96.60	-2.15	0.96	0.942395
989	3R_DroMel_CAF1	3,168,411 – 3,168,570	- - - - - - - - -	1602	3,168,411 – 3,168,530	+	4	120	92.47	-2.34	0.80	0.881569
989	3R_DroMel_CAF1	3,168,411 – 3,168,570	- - - - - - - - -	1603	3,168,450 – 3,168,570	+	4	120	95.42	-1.65	0.97	0.824015
990	3R_DroMel_CAF1	3,169,042 – 3,169,162	- - - - - - - - -	1604	3,169,042 – 3,169,162	-	3	120	96.11	-1.67	0.92	0.571661
991	3R_DroMel_CAF1	3,169,788 – 3,169,948	- - - - - - - - -	1605	3,169,788 – 3,169,908	+	3	120	98.33	-2.16	0.94	0.872039
				1606	3,169,788 – 3,169,908	-	3	120	98.33	-1.92	0.94	0.778328
				1607	3,169,828 – 3,169,948	-	3	120	98.89	-2.01	0.99	0.898664
992	3R_DroMel_CAF1	3,171,344 – 3,171,464	- - - "knownCDS=Parent=FBtr0081582;Name=CG31496-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31496-RA" - - - - -	1608	3,171,344 – 3,171,464	+	3	120	90.56	-2.09	0.80	0.570240
993	3R_DroMel_CAF1	3,174,193 – 3,174,307	- - - - - - - - -	1609	3,174,193 – 3,174,307	+	4	120	96.58	-2.32	0.90	0.908697
994	3R_DroMel_CAF1	3,174,347 – 3,174,467	- - - - - - - - -	1610	3,174,347 – 3,174,467	-	4	120	93.89	-1.95	0.80	0.667405
995	3R_DroMel_CAF1	3,174,867 – 3,175,008	- - - - - - - - -	1611	3,174,867 – 3,174,983	+	4	120	76.50	-2.01	0.53	0.629082
995	3R_DroMel_CAF1	3,174,867 – 3,175,008	- - - - - - - - -	1612	3,174,907 – 3,175,008	+	3	120	66.57	-1.00	0.67	0.650047
996	3R_DroMel_CAF1	3,181,580 – 3,181,697	- - - - - - - - -	1613	3,181,580 – 3,181,697	+	5	117	97.61	-2.05	0.89	0.985884
997	3R_DroMel_CAF1	3,181,950 – 3,182,060	- - - - - - - - -	1614	3,181,950 – 3,182,060	+	5	110	93.45	-2.75	0.84	0.998265
997	3R_DroMel_CAF1	3,181,950 – 3,182,060	- - - - - - - - -	1615	3,181,950 – 3,182,060	-	5	110	93.45	-1.46	0.81	0.624093
998	3R_DroMel_CAF1	3,183,721 – 3,183,819	- - - - - - - - -	1616	3,183,721 – 3,183,819	+	6	120	79.66	-2.10	0.70	0.919644
998	3R_DroMel_CAF1	3,183,721 – 3,183,819	- - - - - - - - -	1617	3,183,721 – 3,183,819	-	6	120	79.66	-1.54	0.68	0.745164
999	3R_DroMel_CAF1	3,186,441 – 3,186,532	- - - - - - - - -	1618	3,186,441 – 3,186,532	+	4	99	91.93	-1.50	0.88	0.677378
999	3R_DroMel_CAF1	3,186,441 – 3,186,532	- - - - - - - - -	1619	3,186,441 – 3,186,532	-	4	99	91.93	-2.62	0.88	0.984590
1000	3R_DroMel_CAF1	3,190,131 – 3,190,236	- - - "knownCDS=Parent=FBtr0081587;Name=Mst84Dc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17945-RA" - - - - -	1620	3,190,131 – 3,190,236	+	5	120	83.55	-1.83	0.66	0.633130
1001	3R_DroMel_CAF1	3,191,133 – 3,191,252	- - - "knownCDS=Parent=FBtr0081586;Name=Mst84Db-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17934-RA" - - - - -	1621	3,191,133 – 3,191,252	+	5	119	95.97	-2.84	0.94	0.999940
1002	3R_DroMel_CAF1	3,191,807 – 3,191,927	- - - "knownCDS=Parent=FBtr0081584;Name=Mst84Da-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17946-RA" - - - - -	1622	3,191,807 – 3,191,927	-	5	120	97.67	-1.29	0.93	0.724429
1003	3R_DroMel_CAF1	3,192,413 – 3,192,533	- - - "knownCDS=Parent=FBtr0081585;Name=MstProx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1149-RA" - - - - -	1623	3,192,413 – 3,192,533	-	3	120	97.22	-1.84	0.99	0.859067
1004	3R_DroMel_CAF1	3,193,321 – 3,193,481	- - - "knownCDS=Parent=FBtr0081585;Name=MstProx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1149-RA" - - - - -	1624	3,193,321 – 3,193,441	-	3	120	93.33	-1.98	1.00	0.951943
1004	3R_DroMel_CAF1	3,193,321 – 3,193,481		1625	3,193,361 – 3,193,481	-	3	120	91.67	-3.18	0.83	0.932350
1005	3R_DroMel_CAF1	3,197,602 – 3,197,743	- - - - - - - - -	1626	3,197,602 – 3,197,703	+	4	120	78.07	-2.24	0.54	0.807854
				1627	3,197,602 – 3,197,703	-	4	120	78.07	-2.95	0.56	0.994217
				1628	3,197,631 – 3,197,743	+	4	120	84.38	-1.82	0.69	0.725124
				1629	3,197,631 – 3,197,743	-	4	120	84.38	-1.62	0.67	0.570312
1006	3R_DroMel_CAF1	3,200,197 – 3,200,289	- - - - - - - - -	1630	3,200,197 – 3,200,289	-	4	92	94.57	-1.92	0.93	0.919275
1007	3R_DroMel_CAF1	3,200,326 – 3,200,445	- - - - - - - - -	1631	3,200,326 – 3,200,445	-	4	119	86.83	-1.38	0.75	0.507667
1008	3R_DroMel_CAF1	3,201,498 – 3,201,594	- - - - - - - - -	1632	3,201,498 – 3,201,594	+	4	96	96.00	-1.65	0.88	0.588059
1009	3R_DroMel_CAF1	3,202,615 – 3,202,773	- - - - - - - - -	1633	3,202,615 – 3,202,733	+	4	118	91.20	-2.06	0.83	0.891446
				1634	3,202,655 – 3,202,773	+	4	118	97.46	-2.48	0.95	0.950441
				1635	3,202,655 – 3,202,773	-	4	118	97.46	-1.89	0.96	0.822337
1010	3R_DroMel_CAF1	3,203,782 – 3,203,876	- - - - - - - - -	1636	3,203,782 – 3,203,876	-	4	97	88.56	-1.50	0.81	0.620363
1011	3R_DroMel_CAF1	3,204,449 – 3,204,550	- - - - - - - - -	1637	3,204,449 – 3,204,550	+	4	110	91.47	-2.94	0.89	0.993824
1012	3R_DroMel_CAF1	3,204,656 – 3,204,762	- - - - - - - - -	1638	3,204,656 – 3,204,762	-	6	120	67.48	-1.16	0.63	0.708856
1013	3R_DroMel_CAF1	3,205,155 – 3,205,247	- - - - - - - - -	1639	3,205,155 – 3,205,247	-	5	95	77.25	-2.19	0.54	0.937432
1014	3R_DroMel_CAF1	3,205,975 – 3,206,074	- - - - - - - - -	1640	3,205,975 – 3,206,074	-	6	120	76.16	-1.48	0.63	0.760178
1015	3R_DroMel_CAF1	3,206,220 – 3,206,340	- - - - - - - - -	1641	3,206,220 – 3,206,340	+	4	120	91.94	-1.72	0.81	0.703650
1016	3R_DroMel_CAF1	3,206,973 – 3,207,069	- - - - - - - - -	1642	3,206,973 – 3,207,069	+	6	113	79.65	-1.58	0.59	0.523225
1017	3R_DroMel_CAF1	3,207,682 – 3,207,774	- - - - - - - - -	1643	3,207,682 – 3,207,774	-	6	105	64.88	-2.30	0.19	0.518948
1018	3R_DroMel_CAF1	3,208,109 – 3,208,297	- - - - - - - - -	1644	3,208,109 – 3,208,218	-	4	109	91.51	-1.90	0.79	0.746626
				1645	3,208,149 – 3,208,257	-	4	108	87.54	-1.98	0.76	0.840892
				1646	3,208,184 – 3,208,297	+	4	113	87.17	-2.14	0.70	0.805746
1019	3R_DroMel_CAF1	3,208,729 – 3,208,831	- - - - - - - - -	1647	3,208,729 – 3,208,831	-	4	102	91.83	-1.49	0.80	0.506147
1020	3R_DroMel_CAF1	3,208,966 – 3,209,096	- - - - - - - - -	1648	3,208,966 – 3,209,058	+	6	119	72.71	-1.47	0.57	0.700186
1020	3R_DroMel_CAF1	3,208,966 – 3,209,096	- - - - - - - - -	1649	3,208,983 – 3,209,096	+	6	119	69.95	-1.54	0.50	0.633882
1021	3R_DroMel_CAF1	3,210,718 – 3,210,837	- - - - - - - - -	1650	3,210,718 – 3,210,837	-	5	119	91.26	-1.56	0.78	0.614774
1022	3R_DroMel_CAF1	3,211,503 – 3,211,671	- - - - - - - - -	1651	3,211,503 – 3,211,594	+	5	92	96.28	-2.83	0.93	0.999882
				1652	3,211,503 – 3,211,594	-	5	92	96.28	-2.30	0.88	0.997263
				1653	3,211,523 – 3,211,634	+	5	111	97.12	-3.08	0.95	0.999942
				1654	3,211,523 – 3,211,634	-	5	111	97.12	-1.90	0.94	0.995748
				1655	3,211,558 – 3,211,671	+	5	113	97.35	-1.63	0.92	0.960853
				1656	3,211,558 – 3,211,671	-	5	113	97.35	-1.69	0.95	0.983524
1023	3R_DroMel_CAF1	3,211,760 – 3,211,852	- - - - - - - - -	1657	3,211,760 – 3,211,852	-	4	92	81.61	-1.41	0.81	0.516391
1024	3R_DroMel_CAF1	3,212,194 – 3,212,323	- - - - - - - - -	1658	3,212,194 – 3,212,305	-	5	112	91.25	-2.23	0.77	0.925973
1024	3R_DroMel_CAF1	3,212,194 – 3,212,323	- - - - - - - - -	1659	3,212,233 – 3,212,323	-	5	90	94.89	-1.62	0.80	0.655235
1025	3R_DroMel_CAF1	3,214,461 – 3,214,552	- - - - - - - - -	1660	3,214,461 – 3,214,552	+	5	120	84.43	-1.71	0.77	0.691667
1026	3R_DroMel_CAF1	3,216,381 – 3,216,472	- - - - - - - - -	1661	3,216,381 – 3,216,472	-	6	101	83.09	-2.27	0.85	0.911900
1027	3R_DroMel_CAF1	3,217,847 – 3,217,941	- - - - - - - - -	1662	3,217,847 – 3,217,941	+	5	120	67.52	-2.35	0.22	0.896194
1028	3R_DroMel_CAF1	3,218,706 – 3,218,813	- - - - - - - - -	1663	3,218,706 – 3,218,813	+	6	108	79.12	-1.77	0.56	0.613153
1029	3R_DroMel_CAF1	3,219,021 – 3,219,152	- - - - - - - - -	1664	3,219,021 – 3,219,123	+	5	102	96.67	-1.45	0.93	0.919765
				1665	3,219,021 – 3,219,123	-	5	102	96.67	-1.11	0.94	0.562249
				1666	3,219,043 – 3,219,152	+	5	109	97.61	-2.00	0.97	0.997916
				1667	3,219,043 – 3,219,152	-	5	109	97.61	-1.46	0.97	0.942198
1030	3R_DroMel_CAF1	3,219,473 – 3,219,573	- - - - - - - - -	1668	3,219,473 – 3,219,573	+	5	100	97.70	-1.26	0.95	0.752892
1030	3R_DroMel_CAF1	3,219,473 – 3,219,573	- - - - - - - - -	1669	3,219,473 – 3,219,573	-	5	100	97.70	-1.58	0.99	0.980760
1031	3R_DroMel_CAF1	3,220,435 – 3,220,536	- - - - - - - - -	1670	3,220,435 – 3,220,536	+	3	101	96.04	-1.98	0.98	0.896661
1032	3R_DroMel_CAF1	3,224,309 – 3,224,422	- - - - - - - - -	1671	3,224,309 – 3,224,422	+	6	120	78.86	-1.60	0.59	0.606473
1033	3R_DroMel_CAF1	3,225,020 – 3,225,116	- - - - - - - - -	1672	3,225,020 – 3,225,116	-	3	111	74.77	-1.54	0.60	0.533268
1034	3R_DroMel_CAF1	3,228,746 – 3,228,860	- - - - - - - - -	1673	3,228,746 – 3,228,860	+	6	120	77.00	-1.92	0.51	0.705092
1035	3R_DroMel_CAF1	3,229,433 – 3,229,555	- - - - - - - - -	1674	3,229,433 – 3,229,531	+	5	100	97.77	-1.13	0.96	0.564848
				1675	3,229,433 – 3,229,531	-	5	100	97.77	-1.46	0.95	0.925766
				1676	3,229,460 – 3,229,555	+	6	120	73.81	-2.36	0.49	0.979558
1036	3R_DroMel_CAF1	3,229,650 – 3,229,747	- - - - - - - - -	1677	3,229,650 – 3,229,747	+	5	102	89.87	-1.65	0.74	0.582444
1037	3R_DroMel_CAF1	3,231,051 – 3,231,249	- - - - - - - - -	1678	3,231,051 – 3,231,147	+	5	96	98.12	-1.56	0.98	0.964786
				1679	3,231,051 – 3,231,147	-	5	96	98.12	-2.91	0.96	0.999857
				1680	3,231,147 – 3,231,249	+	4	113	87.52	-1.96	0.75	0.819223
1038	3R_DroMel_CAF1	3,233,895 – 3,234,045	- - - "knownCDS=Parent=FBtr0081531;Name=CG10101-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10101-RA" - - - - -	1681	3,233,895 – 3,234,005	+	6	120	76.53	-1.38	0.73	0.882425
1038	3R_DroMel_CAF1	3,233,895 – 3,234,045		1682	3,233,925 – 3,234,045	+	6	120	75.35	-1.57	0.58	0.725550
1039	3R_DroMel_CAF1	3,234,955 – 3,235,096	- - - "knownCDS=Parent=FBtr0081531;Name=CG10101-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10101-RA" - - - - -	1683	3,234,955 – 3,235,071	+	6	120	75.62	-2.24	0.46	0.902243
1039	3R_DroMel_CAF1	3,234,955 – 3,235,096		1684	3,234,995 – 3,235,096	+	6	101	89.44	-3.01	0.86	0.989077
1040	3R_DroMel_CAF1	3,236,526 – 3,236,623	- - - - - - - - -	1685	3,236,526 – 3,236,623	-	5	103	89.49	-1.88	0.82	0.922490
1041	3R_DroMel_CAF1	3,237,297 – 3,237,393	- - - - - - - - -	1686	3,237,297 – 3,237,393	+	6	100	79.17	-1.47	0.69	0.765802
1042	3R_DroMel_CAF1	3,237,527 – 3,237,638	- - - - - - - - -	1687	3,237,527 – 3,237,638	-	5	111	88.74	-2.42	0.65	0.519284
1043	3R_DroMel_CAF1	3,241,719 – 3,241,853	- - - - - - - - -	1688	3,241,719 – 3,241,817	+	6	107	68.80	-1.86	0.35	0.646670
1043	3R_DroMel_CAF1	3,241,719 – 3,241,853	- - - - - - - - -	1689	3,241,746 – 3,241,853	-	6	120	67.21	-2.70	0.22	0.928089
1044	3R_DroMel_CAF1	3,242,709 – 3,242,809	- - - - - - - - -	1690	3,242,709 – 3,242,809	+	6	100	96.33	-1.09	0.94	0.852117
1045	3R_DroMel_CAF1	3,245,993 – 3,246,100	- - - "knownCDS=Parent=FBtr0100078;Name=CG34023-cds, ;Dbxref=FlyBase+Annotation+IDs:CG34023-RA" - - - - -	1691	3,245,993 – 3,246,100	+	3	120	77.78	-2.45	0.65	0.989734
1045	3R_DroMel_CAF1	3,245,993 – 3,246,100		1692	3,245,993 – 3,246,100	-	3	120	77.78	-1.83	0.69	0.902914
1046	3R_DroMel_CAF1	3,246,594 – 3,246,698	- - - "knownCDS=Parent=FBtr0081533;Name=CG10113-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10113-RA" - - - - -	1693	3,246,594 – 3,246,698	+	6	104	81.15	-2.00	0.73	0.853050
1047	3R_DroMel_CAF1	3,247,923 – 3,248,043	- - - "knownCDS=Parent=FBtr0081533;Name=CG10113-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10113-RA" - - - - -	1694	3,247,923 – 3,248,043	+	6	120	79.33	-3.48	0.64	0.984452
1047	3R_DroMel_CAF1	3,247,923 – 3,248,043		1695	3,247,923 – 3,248,043	-	6	120	79.33	-2.81	0.60	0.966935
1048	3R_DroMel_CAF1	3,248,322 – 3,248,417	- - - - - - - - -	1696	3,248,322 – 3,248,417	+	6	102	75.48	-1.70	0.53	0.651942
1049	3R_DroMel_CAF1	3,251,781 – 3,251,872	- - - - - - - - -	1697	3,251,781 – 3,251,872	-	6	92	92.04	-1.21	0.89	0.500000
1050	3R_DroMel_CAF1	3,259,064 – 3,259,160	- - - - - - - - -	1698	3,259,064 – 3,259,160	-	5	96	89.79	-1.63	0.74	0.553853
1051	3R_DroMel_CAF1	3,268,080 – 3,268,195	- - - - - - - - -	1699	3,268,080 – 3,268,181	+	4	101	91.25	-2.79	0.74	0.842578
				1700	3,268,080 – 3,268,181	-	4	101	91.25	-2.22	0.93	0.983528
				1701	3,268,105 – 3,268,195	+	4	90	92.96	-2.52	0.82	0.922831
				1702	3,268,105 – 3,268,195	-	4	90	92.96	-2.50	0.97	0.994364
1052	3R_DroMel_CAF1	3,268,367 – 3,268,459	- - - - - - - - -	1703	3,268,367 – 3,268,459	+	3	96	77.14	-0.49	0.89	0.637692
1053	3R_DroMel_CAF1	3,268,617 – 3,268,720	- - - - - - - - -	1704	3,268,617 – 3,268,720	+	6	109	79.97	-2.53	0.48	0.769307
1054	3R_DroMel_CAF1	3,269,867 – 3,269,958	- - - - - - - - -	1705	3,269,867 – 3,269,958	+	6	112	78.74	-2.18	0.55	0.860481
1054	3R_DroMel_CAF1	3,269,867 – 3,269,958	- - - - - - - - -	1706	3,269,867 – 3,269,958	-	6	112	78.74	-2.18	0.64	0.935459
1055	3R_DroMel_CAF1	3,276,198 – 3,276,296	- - - - - - - - -	1707	3,276,198 – 3,276,296	-	5	100	76.49	-1.77	0.25	0.667397
1056	3R_DroMel_CAF1	3,279,930 – 3,280,047	- - - - - - - - -	1708	3,279,930 – 3,280,047	-	5	117	92.14	-2.62	0.88	0.999495
1057	3R_DroMel_CAF1	3,282,560 – 3,282,711	- - - - - - - - -	1709	3,282,560 – 3,282,675	+	5	115	96.35	-2.31	0.97	0.999821
1057	3R_DroMel_CAF1	3,282,560 – 3,282,711	- - - - - - - - -	1710	3,282,600 – 3,282,711	+	5	111	97.48	-1.26	0.97	0.796600
1058	3R_DroMel_CAF1	3,282,984 – 3,283,088	- - - - - - - - -	1711	3,282,984 – 3,283,088	+	4	112	92.44	-1.29	0.93	0.532111
1059	3R_DroMel_CAF1	3,283,424 – 3,283,524	- - - - - - - - -	1712	3,283,424 – 3,283,524	+	5	102	95.55	-1.49	0.83	0.649311
1060	3R_DroMel_CAF1	3,283,936 – 3,284,056	- - - - - - - - -	1713	3,283,936 – 3,284,056	-	5	120	96.00	-1.42	0.90	0.855837
1061	3R_DroMel_CAF1	3,284,456 – 3,284,594	- - - - - - - - -	1714	3,284,456 – 3,284,576	-	6	120	90.94	-2.40	0.91	0.995236
				1715	3,284,496 – 3,284,594	+	5	98	96.94	-1.53	0.94	0.958193
				1716	3,284,496 – 3,284,594	-	5	98	96.94	-1.53	0.96	0.972927
1062	3R_DroMel_CAF1	3,285,798 – 3,285,934	- - - - - - - - -	1717	3,285,798 – 3,285,896	-	5	98	97.03	-1.03	1.00	0.516503
1062	3R_DroMel_CAF1	3,285,798 – 3,285,934	- - - - - - - - -	1718	3,285,838 – 3,285,934	+	5	96	99.17	-1.25	0.96	0.567814
1063	3R_DroMel_CAF1	3,286,256 – 3,286,374	- - - - - - - - -	1719	3,286,256 – 3,286,374	+	5	118	96.27	-1.19	0.91	0.598403
1064	3R_DroMel_CAF1	3,287,508 – 3,287,611	- - - - - - - - -	1720	3,287,508 – 3,287,611	-	5	103	99.22	-1.17	1.00	0.526205
1065	3R_DroMel_CAF1	3,288,908 – 3,289,068	- - - - - - - - -	1721	3,288,908 – 3,289,010	-	4	114	86.41	-2.00	0.75	0.849120
				1722	3,288,976 – 3,289,068	+	5	92	97.17	-1.15	0.92	0.523547
				1723	3,288,976 – 3,289,068	-	5	92	97.17	-1.42	0.88	0.729194
1066	3R_DroMel_CAF1	3,289,128 – 3,289,239	- - - - - - - - -	1724	3,289,128 – 3,289,239	+	6	120	87.19	-3.03	0.71	0.528870
1067	3R_DroMel_CAF1	3,289,751 – 3,289,870	- - - - - - - - -	1725	3,289,751 – 3,289,846	+	6	120	82.45	-1.61	0.67	0.546287
1067	3R_DroMel_CAF1	3,289,751 – 3,289,870	- - - - - - - - -	1726	3,289,780 – 3,289,870	-	6	120	75.78	-2.01	0.46	0.726633
1068	3R_DroMel_CAF1	3,291,908 – 3,292,015	- - - - - - - - -	1727	3,291,908 – 3,292,015	-	5	108	90.91	-1.25	0.96	0.806403
1069	3R_DroMel_CAF1	3,292,080 – 3,292,199	- - - - - - - - -	1728	3,292,080 – 3,292,199	+	5	119	78.66	-1.76	0.66	0.778015
1070	3R_DroMel_CAF1	3,292,671 – 3,292,809	- - - - - - - - -	1729	3,292,671 – 3,292,769	-	5	98	91.94	-1.87	0.98	0.998663
1070	3R_DroMel_CAF1	3,292,671 – 3,292,809	- - - - - - - - -	1730	3,292,708 – 3,292,809	-	5	101	89.80	-1.33	0.88	0.665201
1071	3R_DroMel_CAF1	3,293,167 – 3,293,266	- - - - - - - - -	1731	3,293,167 – 3,293,266	+	5	100	87.51	-2.00	0.65	0.500000
1072	3R_DroMel_CAF1	3,294,120 – 3,294,216	- - - - - - - - -	1732	3,294,120 – 3,294,216	+	5	102	93.29	-1.41	0.82	0.599852
1072	3R_DroMel_CAF1	3,294,120 – 3,294,216	- - - - - - - - -	1733	3,294,120 – 3,294,216	-	5	102	93.29	-2.03	0.87	0.993617
1073	3R_DroMel_CAF1	3,295,012 – 3,295,108	- - "RNAmicro=f:3295012_t:3295107_strand:+_p:0.996132" - - - - - -	1734	3,295,012 – 3,295,108	+	3	96	88.89	-3.64	0.78	0.940288
1074	3R_DroMel_CAF1	3,296,001 – 3,296,119	- - - - - - - - -	1735	3,296,001 – 3,296,119	+	3	118	97.18	-2.70	0.88	0.889241
1075	3R_DroMel_CAF1	3,298,692 – 3,298,881	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002568;Name=snoRNA:U85;Dbxref=FB:FBgn0043853,GB:NR_001999" - - - - "Noncode=n1316,u368,AF308282,U85,Drosophila_melanogaster_(fruit_fly)\|3e-105" - - "Flybase=FBgn0043853:snoRNA:U85:nuclear_small_nucleolar_RNA_gene\|3e-106"	1736	3,298,692 – 3,298,802	-	6	113	80.83	-1.81	0.73	0.828267
				1737	3,298,729 – 3,298,841	-	6	115	76.30	-1.92	0.63	0.939144
				1738	3,298,768 – 3,298,881	-	6	120	75.57	-1.23	0.74	0.868107
1076	3R_DroMel_CAF1	3,299,168 – 3,299,270	- - - "knownCDS=Parent=FBtr0081559;Name=CG1142-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1142-RA" - - - - -	1739	3,299,168 – 3,299,270	+	6	113	75.39	-1.31	0.60	0.522476
1077	3R_DroMel_CAF1	3,300,397 – 3,300,757	- - - - - - - - -	1740	3,300,397 – 3,300,517	-	5	120	96.17	-1.22	0.95	0.782231
				1741	3,300,517 – 3,300,637	+	5	120	97.67	-1.30	0.90	0.614406
				1742	3,300,557 – 3,300,677	+	5	120	99.67	-1.42	1.00	0.827855
				1743	3,300,597 – 3,300,717	-	5	120	100.00	-1.34	1.00	0.664326
				1744	3,300,637 – 3,300,757	-	5	120	90.58	-1.95	0.78	0.878421
1078	3R_DroMel_CAF1	3,301,777 – 3,301,895	- - - - - - - - -	1745	3,301,777 – 3,301,895	+	3	118	80.29	-1.95	0.76	0.904072
1079	3R_DroMel_CAF1	3,302,411 – 3,302,611	- - - - - - - - -	1746	3,302,411 – 3,302,531	+	5	120	95.33	-1.86	0.83	0.916202
				1747	3,302,451 – 3,302,571	+	5	120	86.99	-2.18	0.72	0.833546
				1748	3,302,491 – 3,302,611	-	4	120	94.00	-1.53	0.89	0.651403
1080	3R_DroMel_CAF1	3,302,647 – 3,302,767	- - - - - - - - -	1749	3,302,647 – 3,302,767	+	5	120	96.24	-1.33	0.86	0.599862
1081	3R_DroMel_CAF1	3,302,913 – 3,303,031	- - - - - - - - -	1750	3,302,913 – 3,303,031	-	5	120	85.44	-1.82	0.67	0.578182
1082	3R_DroMel_CAF1	3,303,687 – 3,303,886	- - - - - - - - -	1751	3,303,687 – 3,303,806	-	4	120	93.06	-1.80	0.76	0.513573
				1752	3,303,727 – 3,303,846	-	4	120	93.89	-1.64	0.87	0.694279
				1753	3,303,767 – 3,303,886	-	4	120	95.42	-1.68	0.91	0.744059
1083	3R_DroMel_CAF1	3,304,227 – 3,304,335	- - - - - - - - -	1754	3,304,227 – 3,304,335	+	4	120	83.97	-1.80	0.68	0.715149
1083	3R_DroMel_CAF1	3,304,227 – 3,304,335	- - - - - - - - -	1755	3,304,227 – 3,304,335	-	4	120	83.97	-2.79	0.53	0.652271
1084	3R_DroMel_CAF1	3,304,455 – 3,304,604	- - - - - - - - -	1756	3,304,455 – 3,304,564	+	3	120	85.31	-2.06	0.67	0.547953
1084	3R_DroMel_CAF1	3,304,455 – 3,304,604	- - - - - - - - -	1757	3,304,486 – 3,304,604	+	4	120	93.45	-1.89	0.78	0.582360
1085	3R_DroMel_CAF1	3,304,951 – 3,305,071	- - - - - - - - -	1758	3,304,951 – 3,305,071	+	4	120	92.55	-1.58	0.94	0.828697
1085	3R_DroMel_CAF1	3,304,951 – 3,305,071	- - - - - - - - -	1759	3,304,951 – 3,305,071	-	4	120	92.55	-1.66	0.84	0.706741
1086	3R_DroMel_CAF1	3,305,230 – 3,305,428	- - - - - - - - -	1760	3,305,230 – 3,305,348	+	4	120	92.23	-1.42	0.86	0.552982
1086	3R_DroMel_CAF1	3,305,230 – 3,305,428	- - - - - - - - -	1761	3,305,308 – 3,305,428	+	4	120	93.70	-1.81	0.79	0.553571
1087	3R_DroMel_CAF1	3,305,468 – 3,305,602	- - - - - - - - -	1762	3,305,468 – 3,305,563	-	4	120	83.10	-1.95	0.77	0.870866
				1763	3,305,495 – 3,305,602	+	4	120	88.69	-1.58	0.88	0.765733
				1764	3,305,495 – 3,305,602	-	4	120	88.69	-1.60	0.78	0.658561
1088	3R_DroMel_CAF1	3,305,882 – 3,305,999	- - - - - - - - -	1765	3,305,882 – 3,305,999	-	4	120	93.91	-2.13	0.88	0.931487
1089	3R_DroMel_CAF1	3,306,663 – 3,306,931	- - - - - - - - -	1766	3,306,663 – 3,306,771	+	4	120	88.81	-1.49	0.78	0.581395
				1767	3,306,703 – 3,306,811	-	4	120	88.81	-1.78	0.84	0.831006
				1768	3,306,737 – 3,306,851	+	4	120	96.15	-1.56	0.94	0.641614
				1769	3,306,737 – 3,306,851	-	4	120	96.15	-2.33	0.95	0.967454
				1770	3,306,771 – 3,306,891	+	4	120	97.92	-2.06	0.88	0.665790
				1771	3,306,811 – 3,306,931	+	4	120	96.94	-1.70	0.91	0.628512
1090	3R_DroMel_CAF1	3,307,585 – 3,307,888	- - - - - - - - -	1772	3,307,585 – 3,307,705	+	3	120	94.90	-1.58	0.92	0.509781
				1773	3,307,665 – 3,307,782	+	3	119	80.23	-1.46	0.79	0.682698
				1774	3,307,782 – 3,307,888	-	4	120	84.11	-1.91	0.65	0.695670
1091	3R_DroMel_CAF1	3,308,318 – 3,308,575	- - - - - - - - -	1775	3,308,318 – 3,308,420	-	4	120	86.17	-1.42	0.74	0.529020
				1776	3,308,358 – 3,308,460	+	4	120	86.31	-1.53	0.73	0.596337
				1777	3,308,358 – 3,308,460	-	4	120	86.31	-1.92	0.74	0.813383
				1778	3,308,395 – 3,308,500	+	4	120	88.04	-1.60	0.82	0.702427
				1779	3,308,395 – 3,308,500	-	4	120	88.04	-2.03	0.76	0.846011
				1780	3,308,460 – 3,308,575	+	4	120	91.73	-1.46	0.84	0.565947
				1781	3,308,460 – 3,308,575	-	4	120	91.73	-1.58	0.84	0.669630
1092	3R_DroMel_CAF1	3,308,615 – 3,308,735	- - - - - - - - -	1782	3,308,615 – 3,308,735	+	4	120	96.53	-2.59	0.96	0.980078
1092	3R_DroMel_CAF1	3,308,615 – 3,308,735	- - - - - - - - -	1783	3,308,615 – 3,308,735	-	4	120	96.53	-2.24	0.99	0.966947
1093	3R_DroMel_CAF1	3,309,112 – 3,309,284	- - - - - - - - -	1784	3,309,112 – 3,309,204	+	4	92	88.38	-1.96	0.70	0.709898
				1785	3,309,112 – 3,309,204	-	4	92	88.38	-1.91	0.91	0.939045
				1786	3,309,124 – 3,309,244	-	4	120	91.63	-2.82	0.85	0.983097
				1787	3,309,164 – 3,309,284	-	4	120	96.20	-2.75	0.94	0.981628
1094	3R_DroMel_CAF1	3,309,643 – 3,309,763	- - - - - - - - -	1788	3,309,643 – 3,309,763	+	4	120	95.14	-2.02	0.83	0.728477
1095	3R_DroMel_CAF1	3,310,649 – 3,310,803	- - - - - - - - -	1789	3,310,649 – 3,310,764	+	4	120	89.68	-2.96	0.77	0.952073
				1790	3,310,689 – 3,310,803	+	4	120	89.53	-2.44	0.71	0.800744
				1791	3,310,689 – 3,310,803	-	4	120	89.53	-1.83	0.67	0.500000
1096	3R_DroMel_CAF1	3,310,846 – 3,310,963	- - - - - - - - -	1792	3,310,846 – 3,310,963	+	5	120	94.04	-1.37	0.81	0.507899
1097	3R_DroMel_CAF1	3,311,375 – 3,311,613	- - - - - - - - -	1793	3,311,375 – 3,311,495	-	5	120	99.17	-1.24	0.99	0.632726
				1794	3,311,415 – 3,311,534	-	5	120	87.61	-2.21	0.89	0.993825
				1795	3,311,495 – 3,311,613	+	5	120	82.21	-1.58	0.68	0.513831
1098	3R_DroMel_CAF1	3,316,859 – 3,317,007	- - - - - - - - -	1796	3,316,859 – 3,316,974	+	4	119	80.63	-2.01	0.61	0.758605
				1797	3,316,859 – 3,316,974	-	4	119	80.63	-1.88	0.75	0.860960
				1798	3,316,895 – 3,317,007	+	6	120	79.63	-1.44	0.65	0.617138
1099	3R_DroMel_CAF1	3,333,026 – 3,333,122	- - - - - - - - -	1799	3,333,026 – 3,333,122	+	4	96	84.20	-1.68	0.82	0.743009
1100	3R_DroMel_CAF1	3,334,563 – 3,334,655	- - - - - - - - -	1800	3,334,563 – 3,334,655	+	6	98	71.68	-1.68	0.44	0.519230
1100	3R_DroMel_CAF1	3,334,563 – 3,334,655	- - - - - - - - -	1801	3,334,563 – 3,334,655	-	6	98	71.68	-1.46	0.56	0.681765
1101	3R_DroMel_CAF1	3,337,607 – 3,337,706	- - - "knownCDS=Parent=FBtr0081553;Name=alpha-Est8-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1121-RA" - - - - -	1802	3,337,607 – 3,337,706	-	6	111	77.81	-1.76	0.66	0.890530
1102	3R_DroMel_CAF1	3,340,848 – 3,340,956	- - - "knownCDS=Parent=FBtr0081553;Name=alpha-Est8-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1121-RA" - - - - -	1803	3,340,848 – 3,340,956	-	6	120	75.72	-0.73	0.87	0.701912
1103	3R_DroMel_CAF1	3,341,327 – 3,341,423	- - - - - - - - -	1804	3,341,327 – 3,341,423	+	6	106	76.22	-2.29	0.48	0.921731
1103	3R_DroMel_CAF1	3,341,327 – 3,341,423	- - - - - - - - -	1805	3,341,327 – 3,341,423	-	6	106	76.22	-2.22	0.46	0.856423
1104	3R_DroMel_CAF1	3,343,884 – 3,344,072	- - - - - - - - -	1806	3,343,884 – 3,343,996	+	3	120	74.15	-1.20	0.72	0.623492
				1807	3,343,917 – 3,344,033	+	3	120	75.00	-1.76	0.59	0.762428
				1808	3,343,957 – 3,344,072	+	3	120	77.46	-2.33	0.71	0.993355
1105	3R_DroMel_CAF1	3,348,528 – 3,348,625	- - - - - - - - -	1809	3,348,528 – 3,348,625	-	5	99	87.63	-1.52	0.74	0.513929
1106	3R_DroMel_CAF1	3,352,517 – 3,352,613	- - - - - - - - -	1810	3,352,517 – 3,352,613	+	3	96	95.49	-4.02	0.90	0.968012
1106	3R_DroMel_CAF1	3,352,517 – 3,352,613	- - - - - - - - -	1811	3,352,517 – 3,352,613	-	3	96	95.49	-3.21	0.92	0.978870
1107	3R_DroMel_CAF1	3,353,942 – 3,354,053	- - - - - - - - -	1812	3,353,942 – 3,354,053	-	5	120	71.63	-1.51	0.63	0.796933
1108	3R_DroMel_CAF1	3,354,133 – 3,354,244	- - - "knownCDS=Parent=FBtr0081549;Name=alpha-Est6-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1108-RA" - - - - -	1813	3,354,133 – 3,354,244	+	6	114	77.96	-1.28	0.69	0.724263
1109	3R_DroMel_CAF1	3,356,010 – 3,356,129	- - - - - - - - -	1814	3,356,010 – 3,356,129	-	5	120	88.22	-2.24	0.65	0.537251
1110	3R_DroMel_CAF1	3,356,978 – 3,357,138	- - - "knownCDS=Parent=FBtr0081538;Name=alphaTub84D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2512-RA" - - - "ncRNAdb=MmuscAK139683_unclassifiable\|2e-25" -	1815	3,356,978 – 3,357,098	-	5	120	95.42	-1.61	0.87	0.917365
1110	3R_DroMel_CAF1	3,356,978 – 3,357,138		1816	3,357,018 – 3,357,138	+	5	120	96.08	-1.99	0.91	0.995964
1111	3R_DroMel_CAF1	3,357,418 – 3,357,538	- - - "knownCDS=Parent=FBtr0081539;Name=alphaTub84D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2512-RB" - - - "ncRNAdb=MmuscAK139683_unclassifiable\|8e-27" -	1817	3,357,418 – 3,357,538	+	5	120	94.83	-2.41	0.85	0.996618
1112	3R_DroMel_CAF1	3,357,938 – 3,358,178	- - - "knownCDS=Parent=FBtr0081539;Name=alphaTub84D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2512-RB" - - - "ncRNAdb=MmuscAK139683_unclassifiable\|1e-36" -	1818	3,357,938 – 3,358,058	+	5	120	96.75	-1.22	0.93	0.701631
				1819	3,358,018 – 3,358,138	+	5	120	93.83	-1.60	0.85	0.882364
				1820	3,358,058 – 3,358,178	+	5	120	93.67	-2.03	0.95	0.999231
1113	3R_DroMel_CAF1	3,363,185 – 3,363,291	- - - "knownCDS=Parent=FBtr0081546;Name=alpha-Est4-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1082-RA" - - - - -	1821	3,363,185 – 3,363,291	+	6	106	80.82	-2.16	0.76	0.905258
1114	3R_DroMel_CAF1	3,363,894 – 3,363,998	- - - - - - - - -	1822	3,363,894 – 3,363,998	+	6	104	78.21	-1.53	0.59	0.564046
1115	3R_DroMel_CAF1	3,374,782 – 3,375,098	- - - - - - - - -	1823	3,374,782 – 3,374,882	-	5	120	82.58	-2.01	0.68	0.804015
				1824	3,374,882 – 3,374,996	+	5	120	80.93	-1.80	0.60	0.579412
				1825	3,374,996 – 3,375,098	+	5	120	79.49	-1.88	0.54	0.598047
				1826	3,374,996 – 3,375,098	-	5	120	79.49	-2.73	0.51	0.982950
1116	3R_DroMel_CAF1	3,375,208 – 3,375,308	- - - - - - - - -	1827	3,375,208 – 3,375,308	-	4	107	85.19	-1.99	0.71	0.824829
1117	3R_DroMel_CAF1	3,377,328 – 3,377,457	- - - - - - - - -	1828	3,377,328 – 3,377,445	+	5	120	79.00	-2.20	0.57	0.911639
				1829	3,377,328 – 3,377,445	-	5	120	79.00	-2.72	0.53	0.988246
				1830	3,377,367 – 3,377,457	+	4	100	88.42	-3.21	0.72	0.944335
				1831	3,377,367 – 3,377,457	-	4	100	88.42	-4.73	0.72	0.923356
1118	3R_DroMel_CAF1	3,379,663 – 3,379,759	- - - - - - - - -	1832	3,379,663 – 3,379,759	+	5	120	72.61	-1.70	0.69	0.957019
1119	3R_DroMel_CAF1	3,380,019 – 3,380,135	- - - - - - - - -	1833	3,380,019 – 3,380,135	+	5	120	84.95	-2.08	0.62	0.589957
1120	3R_DroMel_CAF1	3,380,713 – 3,380,867	- - - - - - - - -	1834	3,380,713 – 3,380,827	-	3	114	96.49	-2.14	0.92	0.823017
1120	3R_DroMel_CAF1	3,380,713 – 3,380,867	- - - - - - - - -	1835	3,380,753 – 3,380,867	-	4	114	86.70	-1.87	0.77	0.812864
1121	3R_DroMel_CAF1	3,381,239 – 3,381,382	- - - - - - - - -	1836	3,381,239 – 3,381,344	-	4	112	92.37	-2.30	0.86	0.953824
1121	3R_DroMel_CAF1	3,381,239 – 3,381,382	- - - - - - - - -	1837	3,381,269 – 3,381,382	-	4	120	87.50	-1.75	0.81	0.786108
1122	3R_DroMel_CAF1	3,383,210 – 3,383,308	- - - - - - - - -	1838	3,383,210 – 3,383,308	+	5	120	83.15	-2.01	0.60	0.616947
1122	3R_DroMel_CAF1	3,383,210 – 3,383,308	- - - - - - - - -	1839	3,383,210 – 3,383,308	-	5	120	83.15	-2.61	0.65	0.945930
1123	3R_DroMel_CAF1	3,383,415 – 3,383,506	- - - - - - - - -	1840	3,383,415 – 3,383,506	+	4	91	92.12	-2.01	0.82	0.849952
1123	3R_DroMel_CAF1	3,383,415 – 3,383,506	- - - - - - - - -	1841	3,383,415 – 3,383,506	-	4	91	92.12	-2.03	0.85	0.900179
1124	3R_DroMel_CAF1	3,383,782 – 3,383,894	- - - - - - - - -	1842	3,383,782 – 3,383,894	-	5	120	78.66	-1.91	0.41	0.500000
1125	3R_DroMel_CAF1	3,383,952 – 3,384,053	- - - - - - - - -	1843	3,383,952 – 3,384,053	+	3	119	82.35	-1.54	0.74	0.512008
1126	3R_DroMel_CAF1	3,390,872 – 3,390,991	- - - - - - - - -	1844	3,390,872 – 3,390,991	+	5	120	92.38	-1.25	0.86	0.578034
1126	3R_DroMel_CAF1	3,390,872 – 3,390,991	- - - - - - - - -	1845	3,390,872 – 3,390,991	-	5	120	92.38	-1.55	0.84	0.847565
1127	3R_DroMel_CAF1	3,391,165 – 3,391,325	- - - - - - - - -	1846	3,391,165 – 3,391,285	-	3	120	98.33	-1.98	1.01	0.924431
1127	3R_DroMel_CAF1	3,391,165 – 3,391,325	- - - - - - - - -	1847	3,391,205 – 3,391,325	-	3	120	98.33	-1.61	1.01	0.773460
1128	3R_DroMel_CAF1	3,391,507 – 3,391,705	- - - - - - - - -	1848	3,391,507 – 3,391,627	+	3	120	93.61	-1.93	0.91	0.746585
				1849	3,391,547 – 3,391,667	+	3	120	97.22	-1.70	0.96	0.711190
				1850	3,391,547 – 3,391,667	-	3	120	97.22	-2.91	0.96	0.981272
				1851	3,391,587 – 3,391,705	+	3	120	91.62	-2.27	0.95	0.956570
				1852	3,391,587 – 3,391,705	-	3	120	91.62	-3.99	0.92	0.984603
1129	3R_DroMel_CAF1	3,393,046 – 3,393,158	- - - - - - - - -	1853	3,393,046 – 3,393,158	-	4	120	78.47	-2.39	0.65	0.981569
1130	3R_DroMel_CAF1	3,393,580 – 3,393,847	- - - - - - - - -	1854	3,393,580 – 3,393,697	-	4	120	87.90	-1.42	0.78	0.545837
				1855	3,393,697 – 3,393,816	+	4	120	94.10	-2.25	0.92	0.970351
				1856	3,393,736 – 3,393,847	+	4	120	89.36	-2.57	0.90	0.991340
1131	3R_DroMel_CAF1	3,393,926 – 3,394,158	- - - - - - - - -	1857	3,393,926 – 3,394,046	-	4	120	93.61	-1.29	0.99	0.593683
				1858	3,393,966 – 3,394,080	+	4	120	92.59	-1.71	0.78	0.554752
				1859	3,393,966 – 3,394,080	-	4	120	92.59	-1.63	0.86	0.721085
				1860	3,394,046 – 3,394,158	-	4	120	90.33	-1.69	0.72	0.552300
1132	3R_DroMel_CAF1	3,395,403 – 3,395,517	- - - - - - - - -	1861	3,395,403 – 3,395,517	+	4	120	92.59	-2.07	0.83	0.862018
1132	3R_DroMel_CAF1	3,395,403 – 3,395,517	- - - - - - - - -	1862	3,395,403 – 3,395,517	-	4	120	92.59	-1.52	0.80	0.500000
1133	3R_DroMel_CAF1	3,396,765 – 3,396,885	- - - - - - - - -	1863	3,396,765 – 3,396,885	+	4	120	96.65	-1.90	0.93	0.837063
1134	3R_DroMel_CAF1	3,398,078 – 3,398,198	- - - "knownCDS=Parent=FBtr0081543;Name=CG32465-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32465-RB" - - - - -	1864	3,398,078 – 3,398,198	-	4	120	96.94	-1.60	0.93	0.600674
1135	3R_DroMel_CAF1	3,398,232 – 3,398,346	- - - "knownCDS=Parent=FBtr0081543;Name=CG32465-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32465-RB" - - - - -	1865	3,398,232 – 3,398,346	+	4	120	94.02	-1.59	0.94	0.795917
1136	3R_DroMel_CAF1	3,398,866 – 3,398,986	- - - "knownCDS=Parent=FBtr0081543;Name=CG32465-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32465-RB" - - - - -	1866	3,398,866 – 3,398,986	-	4	120	93.33	-2.31	0.84	0.925955
1137	3R_DroMel_CAF1	3,399,026 – 3,399,146	- - - "knownCDS=Parent=FBtr0081543;Name=CG32465-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32465-RB" - - - - -	1867	3,399,026 – 3,399,146	+	4	120	90.56	-1.98	0.91	0.954256
1137	3R_DroMel_CAF1	3,399,026 – 3,399,146		1868	3,399,026 – 3,399,146	-	4	120	90.56	-1.60	0.86	0.743787
1138	3R_DroMel_CAF1	3,400,139 – 3,400,403	- - - - - - - - -	1869	3,400,139 – 3,400,243	-	4	120	89.29	-1.41	0.81	0.543124
				1870	3,400,163 – 3,400,283	+	4	120	98.06	-1.97	0.93	0.757785
				1871	3,400,283 – 3,400,403	+	4	120	96.91	-1.57	0.99	0.672159
1139	3R_DroMel_CAF1	3,402,270 – 3,402,430	- - - - - - - - -	1872	3,402,270 – 3,402,390	+	3	120	93.89	-1.83	0.94	0.759025
1139	3R_DroMel_CAF1	3,402,270 – 3,402,430	- - - - - - - - -	1873	3,402,310 – 3,402,430	-	5	120	76.31	-2.40	0.56	0.987101
1140	3R_DroMel_CAF1	3,403,432 – 3,403,527	- - - - - - - - -	1874	3,403,432 – 3,403,527	-	6	104	80.86	-1.84	0.58	0.555315
1141	3R_DroMel_CAF1	3,415,703 – 3,415,796	- - - - - - - - -	1875	3,415,703 – 3,415,796	-	6	117	75.02	-1.32	0.72	0.891211
1142	3R_DroMel_CAF1	3,415,886 – 3,415,978	- - - - - - - - -	1876	3,415,886 – 3,415,978	+	6	94	76.33	-1.69	0.59	0.800588
1143	3R_DroMel_CAF1	3,419,432 – 3,419,523	- - - - - - - - -	1877	3,419,432 – 3,419,523	+	4	91	95.05	-2.88	0.87	0.964775
1143	3R_DroMel_CAF1	3,419,432 – 3,419,523	- - - - - - - - -	1878	3,419,432 – 3,419,523	-	4	91	95.05	-2.32	0.95	0.976832
1144	3R_DroMel_CAF1	3,425,912 – 3,426,007	- - - - - - - - -	1879	3,425,912 – 3,426,007	+	5	95	93.37	-1.65	0.98	0.995184
1144	3R_DroMel_CAF1	3,425,912 – 3,426,007	- - - - - - - - -	1880	3,425,912 – 3,426,007	-	5	95	93.37	-2.07	0.90	0.997794
1145	3R_DroMel_CAF1	3,426,591 – 3,426,688	- - - - - - - - -	1881	3,426,591 – 3,426,688	+	4	104	84.91	-2.51	0.63	0.860621
1145	3R_DroMel_CAF1	3,426,591 – 3,426,688	- - - - - - - - -	1882	3,426,591 – 3,426,688	-	4	104	84.91	-3.08	0.81	0.995000
1146	3R_DroMel_CAF1	3,426,699 – 3,426,802	- - - - - - - - -	1883	3,426,699 – 3,426,802	+	6	120	91.41	-1.65	0.92	0.954137
1146	3R_DroMel_CAF1	3,426,699 – 3,426,802	- - - - - - - - -	1884	3,426,699 – 3,426,802	-	6	120	91.41	-1.64	0.87	0.793938
1147	3R_DroMel_CAF1	3,429,425 – 3,429,516	- - - - - - - - -	1885	3,429,425 – 3,429,516	-	6	111	80.84	-1.48	0.63	0.514907
1148	3R_DroMel_CAF1	3,433,936 – 3,434,053	- - - - - - - - -	1886	3,433,936 – 3,434,029	+	6	96	82.62	-2.50	0.56	0.584695
1148	3R_DroMel_CAF1	3,433,936 – 3,434,053	- - - - - - - - -	1887	3,433,957 – 3,434,053	-	6	106	90.87	-1.92	0.84	0.738003
1149	3R_DroMel_CAF1	3,444,422 – 3,444,516	- - - - - - - - -	1888	3,444,422 – 3,444,516	+	3	98	76.53	-1.26	0.94	0.995711
1150	3R_DroMel_CAF1	3,445,786 – 3,445,902	- - - - - - - - -	1889	3,445,786 – 3,445,902	-	5	116	94.22	-1.59	0.84	0.852997
1151	3R_DroMel_CAF1	3,449,597 – 3,449,693	- - - - - - - - -	1890	3,449,597 – 3,449,693	+	6	96	95.48	-1.60	0.86	0.695684
1151	3R_DroMel_CAF1	3,449,597 – 3,449,693	- - - - - - - - -	1891	3,449,597 – 3,449,693	-	6	96	95.48	-1.82	0.84	0.719987
1152	3R_DroMel_CAF1	3,461,828 – 3,461,919	- - - - - - - - -	1892	3,461,828 – 3,461,919	-	6	91	97.58	-1.06	0.90	0.506367
1153	3R_DroMel_CAF1	3,480,676 – 3,480,785	- - - - - - - - -	1893	3,480,676 – 3,480,785	+	6	117	81.26	-2.34	0.60	0.792822
1154	3R_DroMel_CAF1	3,484,442 – 3,484,542	- - - - - - - - -	1894	3,484,442 – 3,484,542	+	4	105	85.69	-1.97	0.77	0.861285
1154	3R_DroMel_CAF1	3,484,442 – 3,484,542	- - - - - - - - -	1895	3,484,442 – 3,484,542	-	4	105	85.69	-2.82	0.75	0.978589
1155	3R_DroMel_CAF1	3,484,831 – 3,484,997	- - - - - - - - -	1896	3,484,831 – 3,484,938	+	4	112	89.35	-1.48	0.84	0.633472
				1897	3,484,904 – 3,484,997	+	4	98	92.32	-3.24	0.80	0.943845
				1898	3,484,904 – 3,484,997	-	4	98	92.32	-2.29	0.88	0.967151
1156	3R_DroMel_CAF1	3,486,956 – 3,487,046	- - - - - - - - -	1899	3,486,956 – 3,487,046	+	6	91	66.14	-2.51	0.16	0.642515
1157	3R_DroMel_CAF1	3,490,522 – 3,490,619	- - - - - - - - -	1900	3,490,522 – 3,490,619	-	6	118	75.93	-1.07	0.71	0.687835
1158	3R_DroMel_CAF1	3,506,447 – 3,506,592	- - - - - - - - -	1901	3,506,447 – 3,506,540	+	5	93	79.42	-2.09	0.68	0.933226
				1902	3,506,447 – 3,506,540	-	5	93	79.42	-2.10	0.53	0.798724
				1903	3,506,500 – 3,506,592	+	5	92	77.39	-2.08	0.71	0.970551
				1904	3,506,500 – 3,506,592	-	5	92	77.39	-2.35	0.73	0.991255
1159	3R_DroMel_CAF1	3,508,070 – 3,508,162	- - - - - - - - -	1905	3,508,070 – 3,508,162	+	6	105	71.14	-2.21	0.46	0.974117
1160	3R_DroMel_CAF1	3,508,180 – 3,508,270	- - - - - - - - -	1906	3,508,180 – 3,508,270	+	6	109	79.92	-1.13	0.74	0.583082
1161	3R_DroMel_CAF1	3,512,034 – 3,512,139	- - - - - - - - -	1907	3,512,034 – 3,512,139	-	5	105	92.72	-1.20	0.93	0.751913
1162	3R_DroMel_CAF1	3,514,101 – 3,514,204	- - - - - - - - -	1908	3,514,101 – 3,514,204	+	6	106	92.88	-3.23	0.89	0.999094
1162	3R_DroMel_CAF1	3,514,101 – 3,514,204	- - - - - - - - -	1909	3,514,101 – 3,514,204	-	6	106	92.88	-2.59	0.92	0.999330
1163	3R_DroMel_CAF1	3,518,307 – 3,518,400	- - - "knownCDS=Parent=FBtr0081541;Name=CG31146-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31146-RD" - - - - -	1910	3,518,307 – 3,518,400	-	6	96	80.56	-2.12	0.65	0.855624
1164	3R_DroMel_CAF1	3,518,655 – 3,518,753	- - - "knownCDS=Parent=FBtr0081541;Name=CG31146-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31146-RD" - - - - -	1911	3,518,655 – 3,518,753	-	6	98	79.18	-1.20	0.71	0.642745
1165	3R_DroMel_CAF1	3,519,722 – 3,519,820	- - - - - - - - -	1912	3,519,722 – 3,519,820	-	5	98	92.45	-1.35	1.02	0.967235
1166	3R_DroMel_CAF1	3,544,464 – 3,544,583	- - - - - - - - -	1913	3,544,464 – 3,544,583	-	6	120	97.04	-1.44	0.86	0.574318
1167	3R_DroMel_CAF1	3,545,739 – 3,545,875	- - - - - - - - -	1914	3,545,739 – 3,545,844	+	6	120	85.61	-3.11	0.67	0.581136
1167	3R_DroMel_CAF1	3,545,739 – 3,545,875	- - - - - - - - -	1915	3,545,779 – 3,545,875	+	3	98	82.13	-1.75	0.81	0.778777
1168	3R_DroMel_CAF1	3,545,915 – 3,546,022	- - - - - - - - -	1916	3,545,915 – 3,546,022	+	6	120	92.10	-1.35	0.90	0.732373
1169	3R_DroMel_CAF1	3,547,119 – 3,547,220	- - - - - - - - -	1917	3,547,119 – 3,547,220	+	5	110	69.71	-2.09	0.40	0.946373
1170	3R_DroMel_CAF1	3,548,185 – 3,548,304	- - - - - - - - -	1918	3,548,185 – 3,548,304	-	4	119	94.96	-1.60	0.94	0.755874
1171	3R_DroMel_CAF1	3,550,751 – 3,550,861	- - - - - - - - -	1919	3,550,751 – 3,550,861	-	6	120	86.65	-2.12	0.82	0.747097
1172	3R_DroMel_CAF1	3,551,751 – 3,551,865	- - - - - - - - -	1920	3,551,751 – 3,551,865	+	4	117	94.71	-3.11	0.92	0.990072
1172	3R_DroMel_CAF1	3,551,751 – 3,551,865	- - - - - - - - -	1921	3,551,751 – 3,551,865	-	4	117	94.71	-2.43	0.87	0.941673
1173	3R_DroMel_CAF1	3,552,856 – 3,552,950	- - - - - - - - -	1922	3,552,856 – 3,552,950	-	4	101	79.90	-1.71	0.68	0.670142
1174	3R_DroMel_CAF1	3,553,975 – 3,554,072	- - - - - - - - -	1923	3,553,975 – 3,554,072	-	5	120	74.77	-2.13	0.33	0.944975
1175	3R_DroMel_CAF1	3,564,140 – 3,564,252	- - - - - - - - -	1924	3,564,140 – 3,564,235	-	5	95	91.26	-1.90	0.93	0.996560
1175	3R_DroMel_CAF1	3,564,140 – 3,564,252	- - - - - - - - -	1925	3,564,155 – 3,564,252	-	5	120	82.49	-1.81	0.73	0.754294
1176	3R_DroMel_CAF1	3,565,869 – 3,565,962	- - - - - - - - -	1926	3,565,869 – 3,565,962	-	4	106	84.91	-1.57	0.74	0.619129
1177	3R_DroMel_CAF1	3,567,503 – 3,567,620	- - - - - - - - -	1927	3,567,503 – 3,567,620	+	4	117	89.22	-1.50	0.81	0.609957
1178	3R_DroMel_CAF1	3,567,726 – 3,567,825	- - - - - - - - -	1928	3,567,726 – 3,567,825	+	4	99	94.44	-1.42	0.89	0.513172
1179	3R_DroMel_CAF1	3,568,074 – 3,568,171	- - - - - - - - -	1929	3,568,074 – 3,568,171	+	5	120	78.25	-2.06	0.65	0.932254
1179	3R_DroMel_CAF1	3,568,074 – 3,568,171	- - - - - - - - -	1930	3,568,074 – 3,568,171	-	5	120	78.25	-1.75	0.60	0.638419
1180	3R_DroMel_CAF1	3,569,202 – 3,569,311	- - - - - - - - -	1931	3,569,202 – 3,569,311	+	5	110	93.24	-1.31	0.83	0.559205
1180	3R_DroMel_CAF1	3,569,202 – 3,569,311	- - - - - - - - -	1932	3,569,202 – 3,569,311	-	5	110	93.24	-1.42	0.84	0.718019
1181	3R_DroMel_CAF1	3,570,507 – 3,570,627	- - - - - - - - -	1933	3,570,507 – 3,570,627	-	6	120	88.94	-2.39	0.85	0.928257
1182	3R_DroMel_CAF1	3,570,972 – 3,571,068	- - - - - - - - -	1934	3,570,972 – 3,571,068	-	5	110	87.96	-1.78	0.87	0.926170
1183	3R_DroMel_CAF1	3,571,947 – 3,572,154	- - - - - - - - -	1935	3,571,947 – 3,572,056	+	5	110	86.65	-1.73	0.76	0.701982
1183	3R_DroMel_CAF1	3,571,947 – 3,572,154	- - - - - - - - -	1936	3,572,056 – 3,572,154	+	5	108	88.14	-2.22	0.67	0.638515
1184	3R_DroMel_CAF1	3,572,271 – 3,572,390	- - - - - - - - -	1937	3,572,271 – 3,572,390	+	5	120	88.27	-1.49	0.77	0.546455
1185	3R_DroMel_CAF1	3,572,428 – 3,572,531	- - - - - - - - -	1938	3,572,428 – 3,572,531	-	5	120	89.80	-1.42	0.88	0.767911
1186	3R_DroMel_CAF1	3,574,098 – 3,574,218	- - - "knownCDS=Parent=FBtr0081780;Name=pyd3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3027-RA" - - - - -	1939	3,574,098 – 3,574,218	-	6	120	91.17	-1.60	0.85	0.582129
1187	3R_DroMel_CAF1	3,578,439 – 3,578,571	- - - - - - - - -	1940	3,578,439 – 3,578,533	+	5	94	97.66	-3.22	0.96	0.999936
				1941	3,578,439 – 3,578,533	-	5	94	97.66	-2.37	0.92	0.998730
				1942	3,578,453 – 3,578,571	+	6	120	90.84	-3.56	0.80	0.963028
				1943	3,578,453 – 3,578,571	-	6	120	90.84	-3.48	0.74	0.696196
1188	3R_DroMel_CAF1	3,578,953 – 3,579,105	- - - - - - - - -	1944	3,578,953 – 3,579,065	+	6	120	76.97	-1.44	0.59	0.545671
				1945	3,578,953 – 3,579,065	-	6	120	76.97	-1.33	0.65	0.691084
				1946	3,578,985 – 3,579,105	+	6	120	82.12	-1.29	0.76	0.530829
1189	3R_DroMel_CAF1	3,579,330 – 3,579,423	- - - - - - - - -	1947	3,579,330 – 3,579,423	+	5	93	87.88	-1.55	0.79	0.626447
1190	3R_DroMel_CAF1	3,583,275 – 3,583,429	- - - - - - - - -	1948	3,583,275 – 3,583,389	+	5	115	92.31	-2.94	0.87	0.999732
1190	3R_DroMel_CAF1	3,583,275 – 3,583,429	- - - - - - - - -	1949	3,583,309 – 3,583,429	+	5	120	92.67	-2.78	0.91	0.999913
1191	3R_DroMel_CAF1	3,586,841 – 3,587,092	- - - "knownCDS=Parent=FBtr0081740;Name=CG3066-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3066-RA" - - - - -	1950	3,586,841 – 3,586,937	-	5	96	93.01	-1.79	0.82	0.916418
				1951	3,586,869 – 3,586,977	-	5	108	94.91	-2.40	0.92	0.999659
				1952	3,586,977 – 3,587,092	+	6	120	81.54	-1.92	0.62	0.641061
				1953	3,586,977 – 3,587,092	-	6	120	81.54	-2.07	0.56	0.541750
1192	3R_DroMel_CAF1	3,592,953 – 3,593,052	- - - - - - - - -	1954	3,592,953 – 3,593,052	+	6	120	78.26	-2.43	0.42	0.731129
1193	3R_DroMel_CAF1	3,594,937 – 3,595,032	- - - - - - - - -	1955	3,594,937 – 3,595,032	+	4	95	85.96	-1.86	0.76	0.802437
1194	3R_DroMel_CAF1	3,596,622 – 3,596,758	- - - - - - - - -	1956	3,596,622 – 3,596,718	+	6	99	82.45	-4.00	0.39	0.785059
				1957	3,596,622 – 3,596,718	-	6	99	82.45	-3.94	0.44	0.864598
				1958	3,596,646 – 3,596,758	+	6	115	84.52	-4.38	0.42	0.663385
				1959	3,596,646 – 3,596,758	-	6	115	84.52	-4.13	0.50	0.762076
1195	3R_DroMel_CAF1	3,604,145 – 3,604,239	- - - - - - - - -	1960	3,604,145 – 3,604,239	-	6	103	79.05	-1.58	0.69	0.816876
1196	3R_DroMel_CAF1	3,605,851 – 3,605,958	- - - - - - - - -	1961	3,605,851 – 3,605,958	+	3	107	79.40	-1.22	0.80	0.545809
1197	3R_DroMel_CAF1	3,605,998 – 3,606,104	- - - - - - - - -	1962	3,605,998 – 3,606,104	+	3	106	91.19	-2.08	0.83	0.647780
1198	3R_DroMel_CAF1	3,607,800 – 3,607,897	- - - "knownCDS=Parent=FBtr0081778;Name=CG18747-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18747-RA" - - - - -	1963	3,607,800 – 3,607,897	-	6	102	78.05	-1.03	0.76	0.663430
1199	3R_DroMel_CAF1	3,612,329 – 3,612,420	- - - - - - - - -	1964	3,612,329 – 3,612,420	+	6	94	84.78	-2.63	0.75	0.748170
1200	3R_DroMel_CAF1	3,621,277 – 3,621,376	- - - - - - - - -	1965	3,621,277 – 3,621,376	-	6	100	76.29	-1.68	0.61	0.832364
1201	3R_DroMel_CAF1	3,628,324 – 3,628,427	- - - - - - - - -	1966	3,628,324 – 3,628,427	+	6	119	76.31	-1.73	0.50	0.500000
1202	3R_DroMel_CAF1	3,628,842 – 3,628,947	- - - "knownCDS=Parent=FBtr0081772;Name=CG18268-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18268-RA" - - - - -	1967	3,628,842 – 3,628,947	+	6	108	82.58	-1.47	0.78	0.603499
1202	3R_DroMel_CAF1	3,628,842 – 3,628,947		1968	3,628,842 – 3,628,947	-	6	108	82.58	-1.56	0.68	0.526897
1203	3R_DroMel_CAF1	3,629,030 – 3,629,135	- - - "knownCDS=Parent=FBtr0081772;Name=CG18268-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18268-RA" - - - - -	1969	3,629,030 – 3,629,135	+	6	105	81.08	-1.26	0.68	0.500000
1204	3R_DroMel_CAF1	3,629,485 – 3,629,605	- - - "knownCDS=Parent=FBtr0081772;Name=CG18268-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18268-RA" - - - - -	1970	3,629,485 – 3,629,605	+	6	120	76.83	-1.83	0.56	0.797130
1205	3R_DroMel_CAF1	3,629,930 – 3,630,021	- - - "knownCDS=Parent=FBtr0081772;Name=CG18268-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18268-RA" - - - - -	1971	3,629,930 – 3,630,021	+	6	113	77.83	-1.67	0.78	0.931424
1206	3R_DroMel_CAF1	3,632,720 – 3,632,819	- - "RNAmicro=f:3632720_t:3632827_strand:+_p:0.511542" "knownCDS=Parent=FBtr0081771;Name=CG2993-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2993-RA" - - - - -	1972	3,632,720 – 3,632,819	+	6	108	82.61	-1.36	0.78	0.542830
1206	3R_DroMel_CAF1	3,632,720 – 3,632,819		1973	3,632,720 – 3,632,819	-	6	108	82.61	-1.54	0.80	0.654310
1207	3R_DroMel_CAF1	3,634,792 – 3,634,898	- - - "knownCDS=Parent=FBtr0081771;Name=CG2993-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2993-RA" - - - - -	1974	3,634,792 – 3,634,898	-	6	106	96.48	-1.32	0.87	0.506939
1208	3R_DroMel_CAF1	3,634,956 – 3,635,054	- - - - - - - - -	1975	3,634,956 – 3,635,054	-	5	102	87.21	-1.42	0.88	0.617157
1209	3R_DroMel_CAF1	3,649,139 – 3,649,245	- - - - - - - - -	1976	3,649,139 – 3,649,245	-	4	120	78.85	-1.69	0.70	0.717104
1210	3R_DroMel_CAF1	3,649,523 – 3,649,636	- - - - - - - - -	1977	3,649,523 – 3,649,636	-	6	113	70.39	-0.87	0.72	0.729899
1211	3R_DroMel_CAF1	3,651,858 – 3,651,967	- - - - - - - - -	1978	3,651,858 – 3,651,967	+	4	109	94.65	-1.54	0.88	0.583543
1212	3R_DroMel_CAF1	3,653,699 – 3,653,797	- - - - - - - - -	1979	3,653,699 – 3,653,797	+	4	98	97.45	-1.66	0.91	0.537225
1212	3R_DroMel_CAF1	3,653,699 – 3,653,797	- - - - - - - - -	1980	3,653,699 – 3,653,797	-	4	98	97.45	-1.52	0.98	0.558921
1213	3R_DroMel_CAF1	3,654,192 – 3,654,294	- - - - - - - - -	1981	3,654,192 – 3,654,294	+	3	102	90.49	-1.99	0.88	0.761020
1213	3R_DroMel_CAF1	3,654,192 – 3,654,294	- - - - - - - - -	1982	3,654,192 – 3,654,294	-	3	102	90.49	-2.98	0.94	0.988892
1214	3R_DroMel_CAF1	3,657,111 – 3,657,208	- - - - - - - - -	1983	3,657,111 – 3,657,208	-	4	97	96.05	-1.89	0.84	0.618273
1215	3R_DroMel_CAF1	3,657,792 – 3,657,936	- - - - - - - - -	1984	3,657,792 – 3,657,896	+	3	104	98.08	-1.90	0.98	0.846495
1215	3R_DroMel_CAF1	3,657,792 – 3,657,936	- - - - - - - - -	1985	3,657,826 – 3,657,936	-	3	110	97.58	-2.75	0.91	0.938870
1216	3R_DroMel_CAF1	3,665,261 – 3,665,373	- - - - - - - - -	1986	3,665,261 – 3,665,373	+	5	112	88.30	-2.16	0.72	0.806889
1216	3R_DroMel_CAF1	3,665,261 – 3,665,373	- - - - - - - - -	1987	3,665,261 – 3,665,373	-	5	112	88.30	-2.53	0.75	0.949860
1217	3R_DroMel_CAF1	3,665,676 – 3,665,791	- - - - - - - - -	1988	3,665,676 – 3,665,791	-	4	120	91.35	-1.52	0.82	0.596237
1218	3R_DroMel_CAF1	3,667,148 – 3,667,359	- - - "knownCDS=Parent=FBtr0081751;Name=CG31187-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31187-RA" - - - - -	1989	3,667,148 – 3,667,268	+	4	120	85.56	-2.40	0.67	0.880373
1218	3R_DroMel_CAF1	3,667,148 – 3,667,359		1990	3,667,268 – 3,667,359	-	5	94	84.16	-2.11	0.67	0.775560
1219	3R_DroMel_CAF1	3,673,552 – 3,673,656	- - - "knownCDS=Parent=FBtr0081751;Name=CG31187-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31187-RA" - - - - -	1991	3,673,552 – 3,673,656	+	6	104	89.29	-1.79	0.85	0.700023
1219	3R_DroMel_CAF1	3,673,552 – 3,673,656		1992	3,673,552 – 3,673,656	-	6	104	89.29	-2.40	0.79	0.605145
1220	3R_DroMel_CAF1	3,684,615 – 3,684,796	- - - "knownCDS=Parent=FBtr0081770;Name=CG17816-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17816-RD" - - - - -	1993	3,684,615 – 3,684,733	+	6	118	93.41	-1.95	0.84	0.736743
				1994	3,684,615 – 3,684,733	-	6	118	93.41	-1.82	0.91	0.979098
				1995	3,684,693 – 3,684,796	+	6	117	78.43	-1.04	0.83	0.679674
				1996	3,684,693 – 3,684,796	-	6	117	78.43	-1.03	0.75	0.625958
1221	3R_DroMel_CAF1	3,689,956 – 3,690,072	- - - "knownCDS=Parent=FBtr0081767;Name=CG17816-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17816-RA" - - - - -	1997	3,689,956 – 3,690,072	+	6	120	79.03	-1.37	0.62	0.526310
1222	3R_DroMel_CAF1	3,693,671 – 3,693,806	- - - - - - - - -	1998	3,693,671 – 3,693,766	+	6	109	78.69	-2.48	0.72	0.969377
				1999	3,693,671 – 3,693,766	-	6	109	78.69	-1.73	0.85	0.922459
				2000	3,693,701 – 3,693,806	-	6	119	81.85	-1.45	0.79	0.656113
1223	3R_DroMel_CAF1	3,698,588 – 3,698,683	- - - - - - - - -	2001	3,698,588 – 3,698,683	+	6	103	79.19	-1.85	0.63	0.826573
1224	3R_DroMel_CAF1	3,698,928 – 3,699,025	- - - - - - - - -	2002	3,698,928 – 3,699,025	+	6	100	85.44	-2.13	0.74	0.536830
1225	3R_DroMel_CAF1	3,700,380 – 3,700,489	- - - - - - - - -	2003	3,700,380 – 3,700,489	-	5	115	90.62	-1.92	0.79	0.881359
1226	3R_DroMel_CAF1	3,704,745 – 3,704,841	- - - - - - - - -	2004	3,704,745 – 3,704,841	+	5	96	81.88	-2.54	0.62	0.946293
1226	3R_DroMel_CAF1	3,704,745 – 3,704,841	- - - - - - - - -	2005	3,704,745 – 3,704,841	-	5	96	81.88	-1.96	0.62	0.715047
1227	3R_DroMel_CAF1	3,705,837 – 3,705,941	- - - - - - - - -	2006	3,705,837 – 3,705,941	-	6	109	84.42	-2.53	0.70	0.631822
1228	3R_DroMel_CAF1	3,706,143 – 3,706,243	- - - - - - - - -	2007	3,706,143 – 3,706,243	-	4	101	90.55	-1.59	0.78	0.611273
1229	3R_DroMel_CAF1	3,706,274 – 3,706,374	- - - - - - - - -	2008	3,706,274 – 3,706,374	+	6	102	84.23	-1.86	0.78	0.638744
1230	3R_DroMel_CAF1	3,707,129 – 3,707,228	- - - - - - - - -	2009	3,707,129 – 3,707,228	+	6	99	68.80	-2.70	0.34	0.991642
1231	3R_DroMel_CAF1	3,707,820 – 3,707,918	- - - - - - - - -	2010	3,707,820 – 3,707,918	+	6	101	83.70	-2.27	0.68	0.628431
1232	3R_DroMel_CAF1	3,709,173 – 3,709,344	- - - - - - - - -	2011	3,709,173 – 3,709,270	+	4	97	92.78	-2.41	0.79	0.853032
				2012	3,709,173 – 3,709,270	-	4	97	92.78	-2.42	0.93	0.987759
				2013	3,709,207 – 3,709,304	-	6	115	69.63	-2.46	0.28	0.938552
				2014	3,709,232 – 3,709,344	+	4	112	92.86	-1.65	0.92	0.831602
1233	3R_DroMel_CAF1	3,710,637 – 3,710,729	- - - - - - - - -	2015	3,710,637 – 3,710,729	-	4	93	93.36	-2.75	0.88	0.980843
1234	3R_DroMel_CAF1	3,715,334 – 3,715,449	- - - - - - - - -	2016	3,715,334 – 3,715,449	-	6	118	81.43	-1.60	0.66	0.616636
1235	3R_DroMel_CAF1	3,716,886 – 3,716,980	- - - - - - - - -	2017	3,716,886 – 3,716,980	+	5	102	70.38	-2.09	0.40	0.947779
1236	3R_DroMel_CAF1	3,720,078 – 3,720,173	- - - - - - - - -	2018	3,720,078 – 3,720,173	-	5	108	73.11	-1.70	0.44	0.516634
1237	3R_DroMel_CAF1	3,721,550 – 3,721,650	- - - - - - - - -	2019	3,721,550 – 3,721,650	+	6	108	74.07	-2.55	0.43	0.982032
1238	3R_DroMel_CAF1	3,721,669 – 3,721,766	- - - - - - - - -	2020	3,721,669 – 3,721,766	+	5	99	79.37	-2.10	0.50	0.763330
1239	3R_DroMel_CAF1	3,726,378 – 3,726,482	- - - "knownCDS=Parent=FBtr0081753, FBtr0081754, FBtr0081755;Name=CG31284-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31284-RA, FlyBase+Annotation+IDs:CG31284-RB, FlyBase+Annotation+IDs:CG31284-RC" - - - - -	2021	3,726,378 – 3,726,482	-	6	116	79.20	-1.32	0.78	0.771871
1240	3R_DroMel_CAF1	3,728,206 – 3,728,310	- - - - - - - - -	2022	3,728,206 – 3,728,310	+	6	112	74.43	-2.04	0.40	0.681958
1241	3R_DroMel_CAF1	3,742,600 – 3,742,695	- - - - - - - - -	2023	3,742,600 – 3,742,695	+	5	120	71.20	-1.77	0.50	0.774202
1242	3R_DroMel_CAF1	3,742,775 – 3,742,895	- - - "knownCDS=Parent=FBtr0081762;Name=CG10445-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10445-RA" - - - - -	2024	3,742,775 – 3,742,895	+	5	120	97.67	-1.75	0.94	0.985170
1243	3R_DroMel_CAF1	3,743,015 – 3,743,135	- - - "knownCDS=Parent=FBtr0081762;Name=CG10445-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10445-RA" - - - - -	2025	3,743,015 – 3,743,135	-	5	120	94.25	-1.43	0.82	0.587900
1244	3R_DroMel_CAF1	3,744,355 – 3,744,460	- - - "knownCDS=Parent=FBtr0081762;Name=CG10445-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10445-RA" - - - - -	2026	3,744,355 – 3,744,460	-	4	105	89.84	-1.55	0.77	0.592099
1245	3R_DroMel_CAF1	3,745,177 – 3,745,297	- - - "knownCDS=Parent=FBtr0081762;Name=CG10445-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10445-RA" - - - - -	2027	3,745,177 – 3,745,297	+	5	120	90.33	-1.51	0.77	0.548214
1246	3R_DroMel_CAF1	3,746,463 – 3,746,606	- - - "knownCDS=Parent=FBtr0081758;Name=lds-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2684-RA" - - - - -	2028	3,746,463 – 3,746,581	-	5	118	88.47	-1.95	0.68	0.517169
1246	3R_DroMel_CAF1	3,746,463 – 3,746,606		2029	3,746,503 – 3,746,606	-	5	103	88.45	-1.64	0.80	0.754217
1247	3R_DroMel_CAF1	3,747,576 – 3,747,800	- - - - - - - - -	2030	3,747,576 – 3,747,672	-	5	98	78.22	-1.89	0.50	0.601907
				2031	3,747,672 – 3,747,774	+	6	102	89.22	-1.99	0.86	0.873377
				2032	3,747,706 – 3,747,800	+	6	94	86.17	-1.65	0.87	0.701821
1248	3R_DroMel_CAF1	3,748,730 – 3,748,850	- - - "knownCDS=Parent=FBtr0081758;Name=lds-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2684-RA" - - - - -	2033	3,748,730 – 3,748,850	-	6	120	75.78	-1.69	0.51	0.538794
1249	3R_DroMel_CAF1	3,751,463 – 3,751,566	- - - - - - - - -	2034	3,751,463 – 3,751,566	-	3	106	79.55	-1.63	0.68	0.647739
1250	3R_DroMel_CAF1	3,756,928 – 3,757,030	- - - - - - - - -	2035	3,756,928 – 3,757,030	-	6	103	79.86	-1.75	0.56	0.505785
1251	3R_DroMel_CAF1	3,757,410 – 3,757,500	- - - - - - - - -	2036	3,757,410 – 3,757,500	-	5	92	79.15	-1.96	0.67	0.892582
1252	3R_DroMel_CAF1	3,760,292 – 3,760,382	- - - - - - - - -	2037	3,760,292 – 3,760,382	+	4	94	83.33	-1.58	0.71	0.589469
1253	3R_DroMel_CAF1	3,761,253 – 3,761,422	- - - "knownCDS=Parent=FBtr0081760, FBtr0081761;Name=dsx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11094-RB, FlyBase+Annotation+IDs:CG11094-RC" - - - - -	2038	3,761,253 – 3,761,355	-	6	120	83.30	-2.54	0.84	0.936246
				2039	3,761,275 – 3,761,394	-	6	120	88.09	-2.26	0.79	0.579603
				2040	3,761,315 – 3,761,422	+	6	112	78.59	-1.54	0.71	0.841986
				2041	3,761,315 – 3,761,422	-	6	112	78.59	-1.33	0.74	0.784525
1254	3R_DroMel_CAF1	3,764,615 – 3,764,716	- - - - - - - - -	2042	3,764,615 – 3,764,716	+	4	114	73.67	-3.00	0.57	0.999609
1254	3R_DroMel_CAF1	3,764,615 – 3,764,716	- - - - - - - - -	2043	3,764,615 – 3,764,716	-	4	114	73.67	-2.72	0.62	0.999436
1255	3R_DroMel_CAF1	3,767,052 – 3,767,200	- - - - - - - - -	2044	3,767,052 – 3,767,162	+	6	117	68.19	-2.59	0.30	0.974988
				2045	3,767,052 – 3,767,162	-	6	117	68.19	-2.09	0.34	0.879674
				2046	3,767,087 – 3,767,200	+	6	115	82.00	-2.53	0.56	0.700039
				2047	3,767,087 – 3,767,200	-	6	115	82.00	-2.54	0.59	0.755234
1256	3R_DroMel_CAF1	3,770,391 – 3,770,511	- - - - - - - - -	2048	3,770,391 – 3,770,511	+	3	120	96.11	-2.10	0.87	0.670619
1256	3R_DroMel_CAF1	3,770,391 – 3,770,511	- - - - - - - - -	2049	3,770,391 – 3,770,511	-	3	120	96.11	-2.36	0.89	0.843542
1257	3R_DroMel_CAF1	3,772,463 – 3,772,582	- - - - - - - - -	2050	3,772,463 – 3,772,582	-	3	119	98.88	-2.16	1.00	0.939525
1258	3R_DroMel_CAF1	3,773,082 – 3,773,197	- - - - - - - - -	2051	3,773,082 – 3,773,197	+	4	120	81.82	-1.57	0.66	0.512349
1259	3R_DroMel_CAF1	3,774,332 – 3,774,444	- - - - - - - - -	2052	3,774,332 – 3,774,444	+	4	120	90.87	-1.35	0.84	0.500000
1260	3R_DroMel_CAF1	3,776,446 – 3,776,715	- - - - - - - - -	2053	3,776,446 – 3,776,566	+	4	120	92.92	-2.11	0.82	0.842106
				2054	3,776,486 – 3,776,606	+	4	120	95.56	-2.48	0.91	0.961561
				2055	3,776,486 – 3,776,606	-	4	120	95.56	-1.53	0.88	0.513643
				2056	3,776,526 – 3,776,646	-	4	120	95.56	-1.54	0.93	0.641520
				2057	3,776,606 – 3,776,715	-	4	120	93.06	-2.06	0.85	0.898162
1261	3R_DroMel_CAF1	3,777,489 – 3,777,641	- - - - - - - - -	2058	3,777,489 – 3,777,601	-	4	120	85.80	-1.76	0.82	0.797480
1261	3R_DroMel_CAF1	3,777,489 – 3,777,641	- - - - - - - - -	2059	3,777,521 – 3,777,641	-	4	120	88.80	-1.90	0.82	0.863756
1262	3R_DroMel_CAF1	3,778,029 – 3,778,179	- - - - - - - - -	2060	3,778,029 – 3,778,139	+	4	120	90.76	-1.38	0.84	0.522907
1262	3R_DroMel_CAF1	3,778,029 – 3,778,179	- - - - - - - - -	2061	3,778,060 – 3,778,179	+	4	120	95.28	-2.11	0.86	0.847971
1263	3R_DroMel_CAF1	3,778,299 – 3,778,419	- - - - - - - - -	2062	3,778,299 – 3,778,419	-	4	120	94.58	-1.49	0.92	0.633749
1264	3R_DroMel_CAF1	3,778,578 – 3,778,680	- - - - - - - - -	2063	3,778,578 – 3,778,680	-	4	120	85.45	-1.48	0.77	0.574723
1265	3R_DroMel_CAF1	3,780,108 – 3,780,228	- - - - - - - - -	2064	3,780,108 – 3,780,228	+	5	120	88.91	-2.24	0.82	0.980013
1265	3R_DroMel_CAF1	3,780,108 – 3,780,228	- - - - - - - - -	2065	3,780,108 – 3,780,228	-	5	120	88.91	-1.68	0.78	0.747449
1266	3R_DroMel_CAF1	3,781,124 – 3,781,243	- - - - - - - - -	2066	3,781,124 – 3,781,243	+	5	120	87.41	-1.93	0.87	0.958213
1267	3R_DroMel_CAF1	3,781,744 – 3,781,848	- - - - - - - - -	2067	3,781,744 – 3,781,848	-	5	120	89.87	-2.36	0.90	0.998951
1268	3R_DroMel_CAF1	3,781,888 – 3,782,045	- - - - - - - - -	2068	3,781,888 – 3,782,005	+	5	120	93.28	-1.81	0.81	0.893140
				2069	3,781,888 – 3,782,005	-	5	120	93.28	-1.73	0.75	0.512962
				2070	3,781,927 – 3,782,045	+	5	120	96.48	-1.75	0.92	0.987330
				2071	3,781,927 – 3,782,045	-	5	120	96.48	-3.37	0.93	0.999950
1269	3R_DroMel_CAF1	3,782,567 – 3,782,709	- - - - - - - - -	2072	3,782,567 – 3,782,671	+	5	120	83.73	-1.96	0.59	0.525826
1269	3R_DroMel_CAF1	3,782,567 – 3,782,709	- - - - - - - - -	2073	3,782,607 – 3,782,709	+	5	120	80.49	-2.79	0.63	0.989182
1270	3R_DroMel_CAF1	3,782,826 – 3,782,985	- - - - - - - - -	2074	3,782,826 – 3,782,945	+	5	120	93.15	-1.68	0.84	0.903385
1270	3R_DroMel_CAF1	3,782,826 – 3,782,985	- - - - - - - - -	2075	3,782,866 – 3,782,985	+	5	120	94.32	-1.28	0.93	0.839202
1271	3R_DroMel_CAF1	3,783,361 – 3,783,481	- - - - - - - - -	2076	3,783,361 – 3,783,481	-	5	120	73.60	-1.99	0.53	0.925125
1272	3R_DroMel_CAF1	3,785,587 – 3,785,691	- - - "knownCDS=Parent=FBtr0081759, FBtr0081760, FBtr0081761;Name=dsx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11094-RA, FlyBase+Annotation+IDs:CG11094-RB, FlyBase+Annotation+IDs:CG11094-RC" - - - - -	2077	3,785,587 – 3,785,691	-	4	104	93.91	-1.67	0.91	0.804351
1273	3R_DroMel_CAF1	3,786,038 – 3,786,316	- - - "knownCDS=Parent=FBtr0081759, FBtr0081760, FBtr0081761;Name=dsx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11094-RA, FlyBase+Annotation+IDs:CG11094-RB, FlyBase+Annotation+IDs:CG11094-RC" - - - - -	2078	3,786,038 – 3,786,156	+	5	120	93.59	-3.06	0.85	0.999318
				2079	3,786,077 – 3,786,196	+	5	120	94.12	-2.60	0.87	0.999198
				2080	3,786,116 – 3,786,236	+	5	120	94.50	-2.72	0.99	0.999987
				2081	3,786,116 – 3,786,236	-	5	120	94.50	-2.35	0.91	0.999439
				2082	3,786,196 – 3,786,316	+	5	120	96.00	-1.50	0.96	0.971971
1274	3R_DroMel_CAF1	3,786,396 – 3,786,516	- - - "knownCDS=Parent=FBtr0081759, FBtr0081760, FBtr0081761;Name=dsx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11094-RA, FlyBase+Annotation+IDs:CG11094-RB, FlyBase+Annotation+IDs:CG11094-RC" - - - - -	2083	3,786,396 – 3,786,516	+	5	120	96.83	-1.12	0.95	0.584340
1275	3R_DroMel_CAF1	3,788,585 – 3,788,705	- - - - - - - - -	2084	3,788,585 – 3,788,705	+	4	120	86.31	-2.04	0.70	0.814544
1276	3R_DroMel_CAF1	3,790,611 – 3,790,770	- - - - - - - - -	2085	3,790,611 – 3,790,730	+	5	120	94.32	-1.07	0.95	0.599912
1276	3R_DroMel_CAF1	3,790,611 – 3,790,770	- - - - - - - - -	2086	3,790,650 – 3,790,770	-	5	120	94.83	-2.29	0.89	0.998742
1277	3R_DroMel_CAF1	3,790,840 – 3,791,000	- - - - - - - - -	2087	3,790,840 – 3,790,960	+	5	120	92.42	-2.82	0.81	0.995978
				2088	3,790,840 – 3,790,960	-	5	120	92.42	-1.97	0.79	0.906063
				2089	3,790,880 – 3,791,000	+	5	120	97.17	-1.83	0.89	0.973091
				2090	3,790,880 – 3,791,000	-	5	120	97.17	-1.40	0.93	0.872552
1278	3R_DroMel_CAF1	3,791,978 – 3,792,094	- - - - - - - - -	2091	3,791,978 – 3,792,094	-	5	120	97.28	-1.61	0.90	0.935579
1279	3R_DroMel_CAF1	3,792,927 – 3,793,045	- - - - - - - - -	2092	3,792,927 – 3,793,045	-	5	120	87.71	-1.71	0.71	0.546016
1280	3R_DroMel_CAF1	3,793,616 – 3,793,773	- - - - - - - - -	2093	3,793,616 – 3,793,733	-	5	120	89.51	-2.03	0.79	0.923085
1280	3R_DroMel_CAF1	3,793,616 – 3,793,773	- - - - - - - - -	2094	3,793,654 – 3,793,773	-	5	120	92.17	-1.82	0.78	0.781113
1281	3R_DroMel_CAF1	3,793,812 – 3,793,923	- - - - - - - - -	2095	3,793,812 – 3,793,923	+	5	120	91.19	-2.16	0.84	0.987611
1282	3R_DroMel_CAF1	3,794,706 – 3,794,826	- - - - - - - - -	2096	3,794,706 – 3,794,826	+	5	120	92.25	-1.64	0.78	0.666791
1283	3R_DroMel_CAF1	3,794,979 – 3,795,173	- - - - - - - - -	2097	3,794,979 – 3,795,093	-	5	120	78.61	-2.13	0.55	0.881594
1283	3R_DroMel_CAF1	3,794,979 – 3,795,173	- - - - - - - - -	2098	3,795,053 – 3,795,173	+	5	120	94.67	-1.27	0.95	0.869136
1284	3R_DroMel_CAF1	3,795,213 – 3,795,325	- - - - - - - - -	2099	3,795,213 – 3,795,325	+	5	120	88.62	-1.92	0.79	0.890723
1285	3R_DroMel_CAF1	3,805,472 – 3,805,586	- - - - - - - - -	2100	3,805,472 – 3,805,586	-	5	120	89.34	-2.04	0.85	0.982225
1286	3R_DroMel_CAF1	3,806,165 – 3,806,264	- - - - - - - - -	2101	3,806,165 – 3,806,264	-	4	103	84.96	-1.80	0.65	0.624661
1287	3R_DroMel_CAF1	3,806,444 – 3,806,552	- - - - - - - - -	2102	3,806,444 – 3,806,552	-	5	117	88.13	-1.93	0.74	0.754102
1288	3R_DroMel_CAF1	3,810,919 – 3,811,013	- - - - - - - - -	2103	3,810,919 – 3,811,013	+	6	117	70.95	-1.99	0.33	0.646386
1289	3R_DroMel_CAF1	3,811,902 – 3,812,080	- - - - - - - - -	2104	3,811,902 – 3,812,000	-	4	106	87.06	-2.07	0.75	0.865543
1289	3R_DroMel_CAF1	3,811,902 – 3,812,080	- - - - - - - - -	2105	3,811,968 – 3,812,080	-	4	120	89.17	-1.46	0.77	0.550207
1290	3R_DroMel_CAF1	3,814,987 – 3,815,084	- - - - - - - - -	2106	3,814,987 – 3,815,084	+	5	99	87.45	-3.44	0.61	0.824111
1291	3R_DroMel_CAF1	3,816,399 – 3,816,496	- - - - - - - - -	2107	3,816,399 – 3,816,496	+	5	99	91.15	-1.71	0.82	0.875617
1292	3R_DroMel_CAF1	3,817,298 – 3,817,436	- - - - - - - - -	2108	3,817,298 – 3,817,402	-	5	105	90.13	-1.44	0.78	0.551528
1292	3R_DroMel_CAF1	3,817,298 – 3,817,436	- - - - - - - - -	2109	3,817,338 – 3,817,436	+	6	117	76.36	-2.36	0.51	0.956670
1293	3R_DroMel_CAF1	3,817,686 – 3,817,796	- - - - - - - - -	2110	3,817,686 – 3,817,796	+	5	118	83.93	-2.17	0.82	0.952365
1294	3R_DroMel_CAF1	3,817,975 – 3,818,082	- - - - - - - - -	2111	3,817,975 – 3,818,082	-	3	109	86.03	-2.18	0.81	0.807586
1295	3R_DroMel_CAF1	3,818,116 – 3,818,227	- - - - - - - - -	2112	3,818,116 – 3,818,227	-	5	111	93.06	-1.18	0.87	0.535131
1296	3R_DroMel_CAF1	3,819,782 – 3,819,916	- - - - - - - - -	2113	3,819,782 – 3,819,879	-	5	120	74.38	-1.26	0.67	0.511899
				2114	3,819,800 – 3,819,916	+	5	117	91.71	-1.56	0.81	0.743833
				2115	3,819,800 – 3,819,916	-	5	117	91.71	-1.96	0.82	0.961354
1297	3R_DroMel_CAF1	3,820,074 – 3,820,227	- - - - - - - - -	2116	3,820,074 – 3,820,194	+	5	120	91.50	-2.36	0.80	0.981257
				2117	3,820,074 – 3,820,194	-	5	120	91.50	-4.01	0.82	0.999313
				2118	3,820,114 – 3,820,227	-	5	120	91.30	-3.11	0.81	0.997771
1298	3R_DroMel_CAF1	3,820,305 – 3,820,707	- - - - - - - - -	2119	3,820,305 – 3,820,417	+	4	120	81.47	-1.72	0.65	0.616467
				2120	3,820,345 – 3,820,457	+	4	120	82.35	-2.46	0.68	0.960362
				2121	3,820,345 – 3,820,457	-	4	120	82.35	-1.53	0.72	0.559613
				2122	3,820,417 – 3,820,508	-	4	93	86.59	-1.99	0.80	0.882231
				2123	3,820,457 – 3,820,548	+	4	93	86.41	-2.54	0.62	0.732696
				2124	3,820,457 – 3,820,548	-	4	93	86.41	-3.02	0.79	0.989375
				2125	3,820,469 – 3,820,588	-	4	120	91.77	-1.88	0.84	0.837162
				2126	3,820,508 – 3,820,628	+	5	120	92.25	-1.75	0.76	0.660550
				2127	3,820,548 – 3,820,668	+	5	120	93.75	-3.02	0.86	0.999509
				2128	3,820,588 – 3,820,707	+	5	120	94.97	-1.81	0.90	0.990262
1299	3R_DroMel_CAF1	3,821,731 – 3,821,833	- - - "knownCDS=Parent=FBtr0081782;Name=CG31466-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31466-RA" - - - - -	2129	3,821,731 – 3,821,833	+	4	107	89.31	-1.83	0.93	0.933462
1299	3R_DroMel_CAF1	3,821,731 – 3,821,833		2130	3,821,731 – 3,821,833	-	4	107	89.31	-2.03	0.89	0.950470
1300	3R_DroMel_CAF1	3,821,885 – 3,821,998	- - - "knownCDS=Parent=FBtr0081782;Name=CG31466-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31466-RA" - - - - -	2131	3,821,885 – 3,821,998	-	5	120	89.46	-1.65	0.75	0.602306
1301	3R_DroMel_CAF1	3,822,656 – 3,822,776	- - - - - - - - -	2132	3,822,656 – 3,822,776	-	5	120	96.83	-1.11	0.94	0.552893
1302	3R_DroMel_CAF1	3,825,845 – 3,825,965	- - - "knownCDS=Parent=FBtr0081783;Name=CG14463-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14463-RA" - - - - -	2133	3,825,845 – 3,825,965	+	5	120	93.50	-1.79	0.83	0.932215
1303	3R_DroMel_CAF1	3,826,404 – 3,826,555	- - - "knownCDS=Parent=FBtr0081783;Name=CG14463-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14463-RA" - - - - -	2134	3,826,404 – 3,826,518	-	5	118	87.37	-2.12	0.93	0.994922
				2135	3,826,440 – 3,826,555	+	5	115	82.86	-1.66	0.66	0.530795
				2136	3,826,440 – 3,826,555	-	5	115	82.86	-1.56	0.81	0.612941
1304	3R_DroMel_CAF1	3,828,229 – 3,828,482	- - - "knownCDS=Parent=FBtr0081784;Name=CG2698-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2698-RA" - - - - -	2137	3,828,229 – 3,828,322	-	5	99	85.80	-2.37	0.65	0.771735
				2138	3,828,264 – 3,828,362	+	6	104	83.92	-1.56	0.91	0.770087
				2139	3,828,322 – 3,828,442	+	6	120	78.06	-1.27	0.66	0.624899
				2140	3,828,362 – 3,828,482	+	6	120	77.22	-1.59	0.69	0.895231
1305	3R_DroMel_CAF1	3,829,176 – 3,829,336	- - - "knownCDS=Parent=FBtr0081784;Name=CG2698-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2698-RA" - - - - -	2141	3,829,176 – 3,829,296	-	6	120	87.83	-3.13	0.79	0.879384
1305	3R_DroMel_CAF1	3,829,176 – 3,829,336		2142	3,829,216 – 3,829,336	-	6	120	84.89	-3.39	0.63	0.668909
1306	3R_DroMel_CAF1	3,835,027 – 3,835,161	- - - - - - - - -	2143	3,835,027 – 3,835,147	+	4	120	89.85	-1.78	0.85	0.844097
1306	3R_DroMel_CAF1	3,835,027 – 3,835,161	- - - - - - - - -	2144	3,835,067 – 3,835,161	+	4	94	93.26	-1.63	0.85	0.659415
1307	3R_DroMel_CAF1	3,839,583 – 3,839,802	- - - "knownCDS=Parent=FBtr0081786;Name=CG2702-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2702-RA" - - - - -	2145	3,839,583 – 3,839,700	-	6	117	79.49	-1.25	0.75	0.703648
1307	3R_DroMel_CAF1	3,839,583 – 3,839,802		2146	3,839,700 – 3,839,802	-	6	108	81.28	-1.59	0.69	0.666643
1308	3R_DroMel_CAF1	3,849,859 – 3,849,966	- - - "knownCDS=Parent=FBtr0081818;Name=CG2747-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2747-RA" - - - - -	2147	3,849,859 – 3,849,966	+	6	120	71.74	-1.55	0.53	0.671773
1309	3R_DroMel_CAF1	3,852,458 – 3,852,551	- - - "knownCDS=Parent=FBtr0081818;Name=CG2747-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2747-RA" - - - - -	2148	3,852,458 – 3,852,551	-	6	106	75.32	-1.09	0.68	0.654480
1310	3R_DroMel_CAF1	3,853,926 – 3,854,057	- - - - - - - - -	2149	3,853,926 – 3,854,028	-	4	102	85.93	-2.85	0.76	0.981557
1310	3R_DroMel_CAF1	3,853,926 – 3,854,057	- - - - - - - - -	2150	3,853,962 – 3,854,057	-	4	95	85.61	-3.75	0.63	0.957057
1311	3R_DroMel_CAF1	3,855,034 – 3,855,154	- - - "knownCDS=Parent=FBtr0081819;Name=ImpE3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2723-RA" - - - - -	2151	3,855,034 – 3,855,154	+	6	120	79.69	-1.62	0.59	0.554538
1312	3R_DroMel_CAF1	3,858,053 – 3,858,173	- - - "knownCDS=Parent=FBtr0081816;Name=CG11035-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11035-RA" - - - - -	2152	3,858,053 – 3,858,173	+	6	120	82.72	-1.47	0.74	0.560488
1313	3R_DroMel_CAF1	3,862,867 – 3,862,970	- - - - - - - - -	2153	3,862,867 – 3,862,970	+	3	120	78.29	-1.94	0.85	0.986477
1313	3R_DroMel_CAF1	3,862,867 – 3,862,970	- - - - - - - - -	2154	3,862,867 – 3,862,970	-	3	120	78.29	-1.85	0.66	0.859391
1314	3R_DroMel_CAF1	3,863,564 – 3,863,684	- - - - - - - - -	2155	3,863,564 – 3,863,684	+	4	120	95.82	-1.92	0.86	0.718880
1315	3R_DroMel_CAF1	3,864,105 – 3,864,217	- - - - - - - - -	2156	3,864,105 – 3,864,217	-	4	120	84.17	-2.55	0.65	0.926628
1316	3R_DroMel_CAF1	3,877,930 – 3,878,025	- - - - - - - - -	2157	3,877,930 – 3,878,025	-	5	105	74.01	-1.61	0.54	0.500000
1317	3R_DroMel_CAF1	3,878,299 – 3,878,401	- - - - - - - - -	2158	3,878,299 – 3,878,401	+	6	109	73.99	-1.99	0.38	0.567209
1318	3R_DroMel_CAF1	3,888,741 – 3,888,855	- - - - - - - - -	2159	3,888,741 – 3,888,855	-	6	114	79.77	-1.33	0.70	0.657360
1319	3R_DroMel_CAF1	3,889,066 – 3,889,156	- - - - - - - - -	2160	3,889,066 – 3,889,156	-	4	91	81.50	-2.33	0.58	0.821709
1320	3R_DroMel_CAF1	3,891,183 – 3,891,287	- - - - - - - - -	2161	3,891,183 – 3,891,287	+	6	114	93.14	-1.83	0.89	0.956796
1321	3R_DroMel_CAF1	3,894,192 – 3,894,285	- - - - - - - - -	2162	3,894,192 – 3,894,285	+	6	105	81.50	-2.52	0.58	0.796286
1321	3R_DroMel_CAF1	3,894,192 – 3,894,285	- - - - - - - - -	2163	3,894,192 – 3,894,285	-	6	105	81.50	-1.67	0.67	0.652176
1322	3R_DroMel_CAF1	3,894,773 – 3,894,875	- - - - - - - - -	2164	3,894,773 – 3,894,875	-	5	109	88.45	-1.43	0.78	0.508456
1323	3R_DroMel_CAF1	3,895,138 – 3,895,238	- - - - - - - - -	2165	3,895,138 – 3,895,238	+	6	110	80.93	-1.83	0.69	0.792248
1324	3R_DroMel_CAF1	3,897,529 – 3,897,669	- - - - - - - - -	2166	3,897,529 – 3,897,635	+	5	106	98.49	-3.41	0.98	0.999910
				2167	3,897,529 – 3,897,635	-	5	106	98.49	-2.56	0.97	0.999637
				2168	3,897,555 – 3,897,669	+	6	114	95.50	-2.51	0.91	0.998548
				2169	3,897,555 – 3,897,669	-	6	114	95.50	-1.43	0.88	0.761463
1325	3R_DroMel_CAF1	3,897,699 – 3,897,817	- - - - - - - - -	2170	3,897,699 – 3,897,817	+	3	118	82.49	-1.63	0.70	0.522769
1326	3R_DroMel_CAF1	3,899,313 – 3,899,404	- - - - - - - - -	2171	3,899,313 – 3,899,404	+	3	99	90.57	-2.17	0.89	0.846245
1327	3R_DroMel_CAF1	3,902,922 – 3,903,028	- - - - - - - - -	2172	3,902,922 – 3,903,028	-	6	114	91.90	-1.55	0.86	0.606122
1328	3R_DroMel_CAF1	3,903,076 – 3,903,166	- - - - - - - - -	2173	3,903,076 – 3,903,166	+	6	115	78.29	-2.04	0.58	0.873471
1329	3R_DroMel_CAF1	3,904,866 – 3,904,965	- - - - - - - - -	2174	3,904,866 – 3,904,965	+	6	112	85.02	-1.78	0.81	0.635385
1330	3R_DroMel_CAF1	3,908,650 – 3,908,755	- - - "knownCDS=Parent=FBtr0081789;Name=CG7918-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7918-RA" - - - - -	2175	3,908,650 – 3,908,755	+	6	109	85.77	-1.76	0.84	0.687911
1331	3R_DroMel_CAF1	3,925,897 – 3,926,015	- - - "knownCDS=Parent=FBtr0081791;Name=CG7900-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7900-RA" - - - - -	2176	3,925,897 – 3,926,015	-	6	120	79.89	-2.19	0.48	0.541109
1332	3R_DroMel_CAF1	3,927,072 – 3,927,178	- - - - - - - - -	2177	3,927,072 – 3,927,178	+	4	120	66.47	-2.35	0.45	0.961504
1332	3R_DroMel_CAF1	3,927,072 – 3,927,178	- - - - - - - - -	2178	3,927,072 – 3,927,178	-	4	120	66.47	-2.58	0.54	0.999190
1333	3R_DroMel_CAF1	3,931,857 – 3,931,950	- - - - - - - - -	2179	3,931,857 – 3,931,950	-	5	95	95.10	-1.35	0.89	0.805154
1334	3R_DroMel_CAF1	3,932,970 – 3,933,060	- - - - - - - - -	2180	3,932,970 – 3,933,060	+	5	106	66.77	-2.12	0.52	0.980241
1334	3R_DroMel_CAF1	3,932,970 – 3,933,060	- - - - - - - - -	2181	3,932,970 – 3,933,060	-	5	106	66.77	-2.17	0.39	0.947531
1335	3R_DroMel_CAF1	3,936,340 – 3,936,445	- - - - - - - - -	2182	3,936,340 – 3,936,445	+	4	105	90.92	-1.58	0.88	0.748929
1335	3R_DroMel_CAF1	3,936,340 – 3,936,445	- - - - - - - - -	2183	3,936,340 – 3,936,445	-	4	105	90.92	-1.95	0.84	0.886066
1336	3R_DroMel_CAF1	3,938,454 – 3,938,562	- - - - - - - - -	2184	3,938,454 – 3,938,562	+	5	108	91.38	-1.45	0.91	0.906413
1336	3R_DroMel_CAF1	3,938,454 – 3,938,562	- - - - - - - - -	2185	3,938,454 – 3,938,562	-	5	108	91.38	-1.25	0.86	0.565195
1337	3R_DroMel_CAF1	3,943,003 – 3,943,114	- - - - - - - - -	2186	3,943,003 – 3,943,114	+	5	115	93.16	-1.86	0.83	0.944436
1338	3R_DroMel_CAF1	3,948,705 – 3,948,835	- - - - - - - - -	2187	3,948,705 – 3,948,816	+	4	120	75.39	-1.57	0.65	0.596233
				2188	3,948,745 – 3,948,835	+	5	105	70.61	-1.89	0.51	0.907431
				2189	3,948,745 – 3,948,835	-	5	105	70.61	-1.98	0.75	0.995902
1339	3R_DroMel_CAF1	3,949,433 – 3,949,553	- - - "knownCDS=texon3236;Parent=CG_NCBI_GNO_32107336, CG_RGUI_GID_mRNA_40007526, CG_DGIL_SNO_28363880, CG_BATZ_CON_47008754" - - - - -	2190	3,949,433 – 3,949,553	+	6	120	78.78	-1.96	0.51	0.594781
1339	3R_DroMel_CAF1	3,949,433 – 3,949,553		2191	3,949,433 – 3,949,553	-	6	120	78.78	-2.61	0.55	0.952395
1340	3R_DroMel_CAF1	3,952,408 – 3,952,527	- - - "knownCDS=Parent=FBtr0081794;Name=CG7891-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7891-RA" - - - - -	2192	3,952,408 – 3,952,527	+	6	120	76.55	-1.75	0.53	0.660648
1341	3R_DroMel_CAF1	3,961,232 – 3,961,323	- - - - - - - - -	2193	3,961,232 – 3,961,323	+	6	113	75.15	-2.08	0.63	0.973557
1341	3R_DroMel_CAF1	3,961,232 – 3,961,323	- - - - - - - - -	2194	3,961,232 – 3,961,323	-	6	113	75.15	-1.60	0.54	0.602258
1342	3R_DroMel_CAF1	3,965,231 – 3,965,364	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000198;Name=Dmel_Asn_GTT_14000198;TFAMID=DmelNGTT-3965328" "tRNAscan=type:Asn:anticodon:GTT f:3965254_t:3965350_strand=-_cove=86.74" - - "Rfam=AC008257.6/22178-22105_RF00005;tRNA;\|6e-36" - - - "Flybase=FBgn0011931:transfer_RNA:asn5:42Aa:cytosolic_tRNA_gene\|9e-38"	2195	3,965,231 – 3,965,334	+	6	117	82.93	-3.15	0.85	0.970324
				2196	3,965,231 – 3,965,334	-	6	117	82.93	-2.55	0.91	0.973338
				2197	3,965,258 – 3,965,364	+	6	117	79.50	-1.31	0.78	0.752257
				2198	3,965,258 – 3,965,364	-	6	117	79.50	-1.04	0.72	0.513176
1343	3R_DroMel_CAF1	3,965,633 – 3,965,727	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000199;Name=Dmel_Arg_ACG_14000199;TFAMID=DmelRACG-3965745" - - - "Rfam=BX571970.19/11951-12023_RF00005;tRNA;\|3e-12" - "miRBase=hsa-mir-565\|1e-19" - "Flybase=FBgn0011955:transfer_RNA:arg2:42Aa:cytosolic_tRNA_gene\|1e-26"	2199	3,965,633 – 3,965,727	-	5	114	75.22	-0.49	0.83	0.636484
1344	3R_DroMel_CAF1	3,965,871 – 3,966,050	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000200;Name=Dmel_Arg_ACG_14000200;TFAMID=DmelRACG-3966017" "tRNAscan=type:Arg:anticodon:ACG f:3965944_t:3966089_strand=-_cove=73.12" - - "Rfam=BX855613.7/36056-35983_RF00005;tRNA;\|2e-18" - "miRBase=hsa-mir-565\|2e-26" - "Flybase=FBgn0011955:transfer_RNA:arg2:42Aa:cytosolic_tRNA_gene\|5e-37"	2200	3,965,871 – 3,965,970	+	4	120	70.92	-1.97	0.57	0.962366
1344	3R_DroMel_CAF1	3,965,871 – 3,966,050		2201	3,965,939 – 3,966,050	+	4	120	87.59	-1.51	0.92	0.757834
1345	3R_DroMel_CAF1	3,966,427 – 3,966,535	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000202;Name=Dmel_Arg_ACG_14000202;TFAMID=DmelRACG-3966521" "tRNAscan=type:Arg:anticodon:ACG f:3966448_t:3966541_strand=-_cove=73.12" - - "Rfam=BX855613.7/36056-35983_RF00005;tRNA;\|1e-18" - "miRBase=hsa-mir-565\|1e-26" - "Flybase=FBgn0011955:transfer_RNA:arg2:42Aa:cytosolic_tRNA_gene\|3e-37"	2202	3,966,427 – 3,966,535	+	3	111	87.58	-1.85	0.89	0.782766
1345	3R_DroMel_CAF1	3,966,427 – 3,966,535		2203	3,966,427 – 3,966,535	-	3	111	87.58	-1.82	0.87	0.726174
1346	3R_DroMel_CAF1	3,966,662 – 3,966,780	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000203;Name=Dmel_Arg_ACG_14000203;TFAMID=DmelRACG-3966764" "tRNAscan=type:Arg:anticodon:ACG f:3966691_t:3966792_strand=-_cove=73.12" - - "Rfam=BX855613.7/36056-35983_RF00005;tRNA;\|1e-18" - "miRBase=hsa-mir-565\|1e-26" - "Flybase=FBgn0011955:transfer_RNA:arg2:42Aa:cytosolic_tRNA_gene\|3e-37"	2204	3,966,662 – 3,966,780	+	3	118	84.62	-0.96	0.92	0.610810
1346	3R_DroMel_CAF1	3,966,662 – 3,966,780		2205	3,966,662 – 3,966,780	-	3	118	84.62	-0.90	0.91	0.534875
1347	3R_DroMel_CAF1	3,970,152 – 3,970,249	- - - - - - - - -	2206	3,970,152 – 3,970,249	+	6	111	82.12	-1.67	0.79	0.736132
1348	3R_DroMel_CAF1	3,971,750 – 3,971,844	- - - - - - - - -	2207	3,971,750 – 3,971,844	+	6	102	77.67	-1.64	0.57	0.612186
1349	3R_DroMel_CAF1	3,983,246 – 3,983,345	- - - - - - - - -	2208	3,983,246 – 3,983,345	+	6	103	84.84	-2.52	0.68	0.517136
1349	3R_DroMel_CAF1	3,983,246 – 3,983,345	- - - - - - - - -	2209	3,983,246 – 3,983,345	-	6	103	84.84	-3.12	0.72	0.778897
1350	3R_DroMel_CAF1	3,992,865 – 3,992,968	- - - "knownCDS=texon11287;Parent=CG_RGUI_GID_mRNA_40007529, CG_DGIL_SNO_28363882, CG_BATZ_CON_47008757" - - - - -	2210	3,992,865 – 3,992,968	+	5	103	81.26	-1.85	0.72	0.813984
1351	3R_DroMel_CAF1	3,994,838 – 3,995,190	- - - - - - - - -	2211	3,994,838 – 3,994,958	+	4	120	86.50	-1.59	0.66	0.525246
				2212	3,994,918 – 3,995,038	+	4	120	86.78	-1.67	0.71	0.642069
				2213	3,995,038 – 3,995,150	-	4	120	78.74	-2.00	0.70	0.921867
				2214	3,995,078 – 3,995,190	+	4	120	88.94	-1.81	0.72	0.666256
1352	3R_DroMel_CAF1	3,995,374 – 3,995,707	- - - - - - - - -	2215	3,995,374 – 3,995,470	-	3	96	99.31	-1.84	1.01	0.868225
				2216	3,995,445 – 3,995,547	+	3	102	99.35	-1.68	0.98	0.726256
				2217	3,995,470 – 3,995,587	+	4	120	96.62	-2.06	0.81	0.500000
				2218	3,995,547 – 3,995,667	+	4	120	96.53	-2.14	0.90	0.873813
				2219	3,995,547 – 3,995,667	-	4	120	96.53	-1.52	0.95	0.591060
				2220	3,995,587 – 3,995,707	+	4	120	81.10	-1.77	0.84	0.861545
1353	3R_DroMel_CAF1	3,996,103 – 3,996,223	- - - - - - - - -	2221	3,996,103 – 3,996,223	+	4	120	91.39	-1.73	0.96	0.930393
1353	3R_DroMel_CAF1	3,996,103 – 3,996,223	- - - - - - - - -	2222	3,996,103 – 3,996,223	-	4	120	91.39	-1.30	0.95	0.602850
1354	3R_DroMel_CAF1	3,996,846 – 3,996,951	- - - - - - - - -	2223	3,996,846 – 3,996,951	-	4	120	87.88	-1.67	0.68	0.571136
1355	3R_DroMel_CAF1	3,997,111 – 3,997,224	- - - - - - - - -	2224	3,997,111 – 3,997,224	+	4	120	93.13	-1.77	0.88	0.833488
1356	3R_DroMel_CAF1	3,997,887 – 3,998,004	- - - - - - - - -	2225	3,997,887 – 3,998,004	-	4	120	94.49	-2.13	0.84	0.850406
1357	3R_DroMel_CAF1	3,998,080 – 3,998,276	- - - - - - - - -	2226	3,998,080 – 3,998,200	+	4	120	96.66	-1.58	0.97	0.690719
				2227	3,998,120 – 3,998,236	+	4	120	95.20	-1.61	0.97	0.798116
				2228	3,998,160 – 3,998,276	+	4	120	94.77	-1.66	0.91	0.748310
1358	3R_DroMel_CAF1	3,998,719 – 3,998,834	- - - - - - - - -	2229	3,998,719 – 3,998,834	-	4	120	89.82	-1.45	0.79	0.542298
1359	3R_DroMel_CAF1	4,000,015 – 4,000,195	- - - - - - - - -	2230	4,000,015 – 4,000,116	-	3	101	100.00	-2.09	1.00	0.922810
				2231	4,000,052 – 4,000,155	+	3	103	100.00	-2.59	0.94	0.937276
				2232	4,000,052 – 4,000,155	-	3	103	100.00	-2.61	1.00	0.976670
				2233	4,000,090 – 4,000,195	+	3	105	99.37	-2.77	0.96	0.966108
				2234	4,000,090 – 4,000,195	-	3	105	99.37	-2.46	0.97	0.955577
1360	3R_DroMel_CAF1	4,000,563 – 4,000,754	- - - - - - - - -	2235	4,000,563 – 4,000,677	+	3	114	84.40	-2.23	0.83	0.903541
				2236	4,000,563 – 4,000,677	-	3	114	84.40	-2.57	0.74	0.909672
				2237	4,000,603 – 4,000,714	+	4	120	91.16	-2.77	0.81	0.964725
				2238	4,000,603 – 4,000,714	-	4	120	91.16	-2.67	0.82	0.966437
				2239	4,000,643 – 4,000,754	+	4	120	91.59	-1.68	0.85	0.769326
1361	3R_DroMel_CAF1	4,001,085 – 4,001,178	- - - - - - - - -	2240	4,001,085 – 4,001,178	-	4	120	82.79	-1.78	0.76	0.782307
1362	3R_DroMel_CAF1	4,001,298 – 4,001,519	- - - - - - - - -	2241	4,001,298 – 4,001,406	+	4	120	91.67	-1.88	0.72	0.509099
1362	3R_DroMel_CAF1	4,001,298 – 4,001,519	- - - - - - - - -	2242	4,001,406 – 4,001,519	+	4	120	94.87	-1.65	0.86	0.627389
1363	3R_DroMel_CAF1	4,001,833 – 4,001,952	- - - - - - - - -	2243	4,001,833 – 4,001,952	-	4	120	94.28	-1.42	0.92	0.594591
1364	3R_DroMel_CAF1	4,002,620 – 4,002,818	- - - - - - - - -	2244	4,002,620 – 4,002,740	+	4	120	99.03	-1.89	0.98	0.697402
				2245	4,002,620 – 4,002,740	-	4	120	99.03	-2.22	0.96	0.837165
				2246	4,002,660 – 4,002,778	+	4	120	96.50	-1.63	0.96	0.727356
				2247	4,002,660 – 4,002,778	-	4	120	96.50	-2.59	0.95	0.977841
				2248	4,002,700 – 4,002,818	-	4	120	94.68	-1.87	0.92	0.893236
1365	3R_DroMel_CAF1	4,003,040 – 4,003,137	- - - - - - - - -	2249	4,003,040 – 4,003,137	+	4	120	88.99	-2.29	0.85	0.963413
1365	3R_DroMel_CAF1	4,003,040 – 4,003,137	- - - - - - - - -	2250	4,003,040 – 4,003,137	-	4	120	88.99	-1.91	0.81	0.854645
1366	3R_DroMel_CAF1	4,003,521 – 4,003,734	- - - - - - - - -	2251	4,003,521 – 4,003,626	+	4	120	91.01	-2.18	0.88	0.959958
				2252	4,003,546 – 4,003,666	-	4	120	98.06	-1.93	0.96	0.804998
				2253	4,003,626 – 4,003,734	+	4	120	91.96	-1.72	0.79	0.652048
1367	3R_DroMel_CAF1	4,004,318 – 4,004,472	- - - - - - - - -	2254	4,004,318 – 4,004,432	+	4	120	85.04	-2.26	0.70	0.895509
1367	3R_DroMel_CAF1	4,004,318 – 4,004,472	- - - - - - - - -	2255	4,004,352 – 4,004,472	-	4	120	90.56	-1.46	0.86	0.616446
1368	3R_DroMel_CAF1	4,006,242 – 4,006,340	- - - - - - - - -	2256	4,006,242 – 4,006,340	+	5	120	83.90	-2.44	0.52	0.578763
1369	3R_DroMel_CAF1	4,006,565 – 4,006,666	- - - - - - - - -	2257	4,006,565 – 4,006,666	+	4	106	91.40	-1.69	0.83	0.736825
1369	3R_DroMel_CAF1	4,006,565 – 4,006,666	- - - - - - - - -	2258	4,006,565 – 4,006,666	-	4	106	91.40	-1.41	0.83	0.519748
1370	3R_DroMel_CAF1	4,006,724 – 4,006,857	- - - - - - - - -	2259	4,006,724 – 4,006,817	+	4	93	94.62	-1.53	0.96	0.742133
1370	3R_DroMel_CAF1	4,006,724 – 4,006,857	- - - - - - - - -	2260	4,006,764 – 4,006,857	+	4	93	95.16	-1.84	0.93	0.874155
1371	3R_DroMel_CAF1	4,007,398 – 4,007,488	- - - - - - - - -	2261	4,007,398 – 4,007,488	-	4	90	95.48	-1.75	0.97	0.870688
1372	3R_DroMel_CAF1	4,007,826 – 4,007,919	- - - - - - - - -	2262	4,007,826 – 4,007,919	-	4	100	92.57	-1.78	0.83	0.741772
1373	3R_DroMel_CAF1	4,007,931 – 4,008,025	- - - - - - - - -	2263	4,007,931 – 4,008,025	+	4	100	95.36	-3.01	0.81	0.848234
1374	3R_DroMel_CAF1	4,008,376 – 4,008,478	- - - - - - - - -	2264	4,008,376 – 4,008,478	-	4	106	90.54	-1.59	0.86	0.741616
1375	3R_DroMel_CAF1	4,009,351 – 4,009,466	- - - - - - - - -	2265	4,009,351 – 4,009,466	-	4	120	94.47	-1.62	0.96	0.822997
1376	3R_DroMel_CAF1	4,011,481 – 4,011,669	- - - - - - - - -	2266	4,011,481 – 4,011,589	+	4	117	86.22	-1.67	0.70	0.635950
				2267	4,011,517 – 4,011,629	+	4	117	92.58	-2.15	0.87	0.941805
				2268	4,011,517 – 4,011,629	-	4	117	92.58	-2.01	0.89	0.932420
				2269	4,011,552 – 4,011,669	+	5	120	92.22	-1.17	0.95	0.720772
1377	3R_DroMel_CAF1	4,012,824 – 4,012,919	- - - - - - - - -	2270	4,012,824 – 4,012,919	+	3	119	83.18	-1.13	0.88	0.572199
1377	3R_DroMel_CAF1	4,012,824 – 4,012,919	- - - - - - - - -	2271	4,012,824 – 4,012,919	-	3	119	83.18	-1.94	0.87	0.909679
1378	3R_DroMel_CAF1	4,018,889 – 4,018,984	- - - - - - - - -	2272	4,018,889 – 4,018,984	-	5	112	80.79	-1.47	0.74	0.549838
1379	3R_DroMel_CAF1	4,021,462 – 4,021,592	- - - - - - - - -	2273	4,021,462 – 4,021,567	-	5	106	93.28	-1.87	0.84	0.961348
1379	3R_DroMel_CAF1	4,021,462 – 4,021,592	- - - - - - - - -	2274	4,021,501 – 4,021,592	-	6	92	88.32	-2.09	0.80	0.552556
1380	3R_DroMel_CAF1	4,021,744 – 4,021,838	- - - - - - - - -	2275	4,021,744 – 4,021,838	-	6	108	76.27	-2.17	0.51	0.912089
1381	3R_DroMel_CAF1	4,031,016 – 4,031,139	- - - - - - - - -	2276	4,031,016 – 4,031,107	+	6	102	80.71	-2.53	0.69	0.925936
				2277	4,031,016 – 4,031,107	-	6	102	80.71	-2.16	0.60	0.781015
				2278	4,031,049 – 4,031,139	-	6	106	77.91	-2.03	0.57	0.866127
1382	3R_DroMel_CAF1	4,041,247 – 4,041,345	- - - - - - - - -	2279	4,041,247 – 4,041,345	-	6	120	78.56	-1.27	0.70	0.697900
1383	3R_DroMel_CAF1	4,041,961 – 4,042,055	- - - - - - - - -	2280	4,041,961 – 4,042,055	+	5	111	70.03	-2.03	0.57	0.978371
1383	3R_DroMel_CAF1	4,041,961 – 4,042,055	- - - - - - - - -	2281	4,041,961 – 4,042,055	-	5	111	70.03	-1.73	0.63	0.944184
1384	3R_DroMel_CAF1	4,042,540 – 4,042,644	- - - - - - - - -	2282	4,042,540 – 4,042,644	-	3	114	81.87	-1.90	0.70	0.735587
1385	3R_DroMel_CAF1	4,048,497 – 4,048,604	- - - - - - - - -	2283	4,048,497 – 4,048,604	-	5	108	82.21	-2.77	0.76	0.991488
1386	3R_DroMel_CAF1	4,049,119 – 4,049,227	- - - - - - - - -	2284	4,049,119 – 4,049,227	+	6	111	81.28	-1.39	0.66	0.518878
1386	3R_DroMel_CAF1	4,049,119 – 4,049,227	- - - - - - - - -	2285	4,049,119 – 4,049,227	-	6	111	81.28	-1.70	0.67	0.681721
1387	3R_DroMel_CAF1	4,052,555 – 4,052,659	- - - - - - - - -	2286	4,052,555 – 4,052,659	-	5	115	79.93	-1.73	0.67	0.709678
1388	3R_DroMel_CAF1	4,053,992 – 4,054,123	- - - - - - - - -	2287	4,053,992 – 4,054,098	+	6	120	93.63	-1.49	0.94	0.968645
				2288	4,053,992 – 4,054,098	-	6	120	93.63	-1.05	0.91	0.561032
				2289	4,054,027 – 4,054,123	+	6	120	76.26	-1.31	0.77	0.900710
1389	3R_DroMel_CAF1	4,056,398 – 4,056,496	- - - - - - - - -	2290	4,056,398 – 4,056,496	+	6	118	69.32	-2.41	0.19	0.668894
1390	3R_DroMel_CAF1	4,056,891 – 4,056,988	- - - - - - - - -	2291	4,056,891 – 4,056,988	-	4	112	80.86	-1.76	0.62	0.576450
1391	3R_DroMel_CAF1	4,063,602 – 4,063,705	- - - "knownCDS=Parent=FBtr0100368;Name=Ada2b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9638-RB" - - - - -	2292	4,063,602 – 4,063,705	+	6	120	81.68	-1.26	0.79	0.562190
1391	3R_DroMel_CAF1	4,063,602 – 4,063,705		2293	4,063,602 – 4,063,705	-	6	120	81.68	-1.98	0.70	0.782542
1392	3R_DroMel_CAF1	4,064,423 – 4,064,531	- - - "knownCDS=Parent=FBtr0100368;Name=Ada2b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9638-RB" - - - - -	2294	4,064,423 – 4,064,531	+	6	108	78.21	-1.92	0.61	0.872941
1393	3R_DroMel_CAF1	4,070,761 – 4,070,881	- - - "knownCDS=Parent=FBtr0091720;Name=CG33722-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33722-RC" - - - - -	2295	4,070,761 – 4,070,881	-	4	120	91.81	-1.60	0.87	0.730549
1394	3R_DroMel_CAF1	4,075,243 – 4,075,363	- - - "knownCDS=Parent=FBtr0081803;Name=CG15864-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15864-RA" - - - - -	2296	4,075,243 – 4,075,363	+	4	120	75.97	-2.13	0.59	0.931290
1395	3R_DroMel_CAF1	4,076,308 – 4,076,428	- - - - - - - - -	2297	4,076,308 – 4,076,428	+	3	120	89.04	-2.19	0.90	0.899289
1396	3R_DroMel_CAF1	4,076,740 – 4,076,900	- - - - - - - - -	2298	4,076,740 – 4,076,860	+	3	120	98.33	-1.61	0.94	0.559370
1396	3R_DroMel_CAF1	4,076,740 – 4,076,900	- - - - - - - - -	2299	4,076,780 – 4,076,900	-	3	120	97.78	-2.23	0.92	0.850124
1397	3R_DroMel_CAF1	4,078,041 – 4,078,240	- - - - - - - - -	2300	4,078,041 – 4,078,161	+	3	120	83.33	-1.87	0.72	0.658190
				2301	4,078,081 – 4,078,201	+	3	120	72.22	-2.33	0.52	0.957113
				2302	4,078,081 – 4,078,201	-	3	120	72.22	-2.58	0.46	0.807820
				2303	4,078,121 – 4,078,240	-	3	120	73.06	-2.55	0.49	0.926828
1398	3R_DroMel_CAF1	4,079,404 – 4,079,604	- - - - - - - - -	2304	4,079,404 – 4,079,524	-	3	120	96.11	-1.70	0.90	0.526649
				2305	4,079,444 – 4,079,564	+	3	120	92.22	-2.83	0.72	0.578759
				2306	4,079,444 – 4,079,564	-	3	120	92.22	-3.28	0.71	0.661315
				2307	4,079,484 – 4,079,604	+	3	120	91.11	-3.84	0.82	0.939519
				2308	4,079,484 – 4,079,604	-	3	120	91.11	-4.21	0.85	0.951551
1399	3R_DroMel_CAF1	4,082,057 – 4,082,197	- - - - - - - - -	2309	4,082,057 – 4,082,157	-	3	120	75.64	-1.58	0.64	0.733133
1399	3R_DroMel_CAF1	4,082,057 – 4,082,197	- - - - - - - - -	2310	4,082,079 – 4,082,197	-	3	120	95.28	-2.30	0.88	0.807922
1400	3R_DroMel_CAF1	4,090,797 – 4,090,971	- - - "knownCDS=Parent=FBtr0081827;Name=Mcm2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7538-RA" - - - - -	2311	4,090,797 – 4,090,917	-	5	120	94.67	-1.01	0.99	0.592420
				2312	4,090,837 – 4,090,957	-	5	120	96.33	-1.31	1.01	0.940088
				2313	4,090,877 – 4,090,971	-	5	94	97.66	-1.39	0.99	0.926605
1401	3R_DroMel_CAF1	4,091,190 – 4,091,350	- - - "knownCDS=Parent=FBtr0081827;Name=Mcm2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7538-RA" - - - - -	2314	4,091,190 – 4,091,310	+	5	120	97.67	-2.13	0.96	0.998694
1401	3R_DroMel_CAF1	4,091,190 – 4,091,350		2315	4,091,230 – 4,091,350	+	5	120	97.17	-1.63	0.97	0.985486
1402	3R_DroMel_CAF1	4,092,394 – 4,092,514	- - - "knownCDS=Parent=FBtr0081827;Name=Mcm2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7538-RA" - - - - -	2316	4,092,394 – 4,092,514	-	4	120	92.78	-1.59	0.87	0.691430
1403	3R_DroMel_CAF1	4,092,554 – 4,092,674	- - - "knownCDS=Parent=FBtr0081827;Name=Mcm2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7538-RA" - - - - -	2317	4,092,554 – 4,092,674	+	5	120	97.58	-1.22	0.91	0.542103
1404	3R_DroMel_CAF1	4,093,074 – 4,093,194	- - - "knownCDS=Parent=FBtr0081827;Name=Mcm2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7538-RA" - - - - -	2318	4,093,074 – 4,093,194	+	5	120	96.08	-1.19	0.89	0.517233
1405	3R_DroMel_CAF1	4,094,382 – 4,094,542	- - - "knownCDS=Parent=FBtr0081866;Name=CG9630-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9630-RA" - - - - -	2319	4,094,382 – 4,094,502	+	5	120	91.17	-1.66	0.91	0.976063
				2320	4,094,382 – 4,094,502	-	5	120	91.17	-1.16	0.91	0.558760
				2321	4,094,422 – 4,094,542	+	5	120	93.58	-1.29	0.95	0.890447
1406	3R_DroMel_CAF1	4,094,662 – 4,094,902	- - - "knownCDS=Parent=FBtr0081866;Name=CG9630-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9630-RA" - - - - -	2322	4,094,662 – 4,094,782	-	5	120	95.33	-1.72	0.95	0.994057
				2323	4,094,742 – 4,094,862	+	5	120	94.00	-1.92	0.95	0.998560
				2324	4,094,782 – 4,094,902	+	5	120	94.00	-1.14	0.94	0.688585
1407	3R_DroMel_CAF1	4,095,182 – 4,095,462	- - - "knownCDS=Parent=FBtr0081866;Name=CG9630-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9630-RA" - - - - -	2325	4,095,182 – 4,095,302	-	5	120	96.00	-1.13	0.91	0.519979
				2326	4,095,222 – 4,095,342	+	5	120	94.33	-1.69	0.87	0.952637
				2327	4,095,262 – 4,095,382	+	5	120	95.33	-1.48	0.82	0.575350
				2328	4,095,262 – 4,095,382	-	5	120	95.33	-1.85	0.81	0.855429
				2329	4,095,302 – 4,095,422	+	5	120	92.67	-2.28	0.77	0.922619
				2330	4,095,302 – 4,095,422	-	5	120	92.67	-2.27	0.81	0.979126
				2331	4,095,342 – 4,095,462	-	5	120	93.17	-1.51	0.79	0.552331
1408	3R_DroMel_CAF1	4,096,151 – 4,096,269	- - - - - - - - -	2332	4,096,151 – 4,096,269	+	5	120	94.29	-2.83	0.74	0.860291
1408	3R_DroMel_CAF1	4,096,151 – 4,096,269	- - - - - - - - -	2333	4,096,151 – 4,096,269	-	5	120	94.29	-2.86	0.82	0.996873
1409	3R_DroMel_CAF1	4,096,509 – 4,096,628	- - - - - - - - -	2334	4,096,509 – 4,096,628	+	5	120	95.45	-1.96	0.93	0.997567
1410	3R_DroMel_CAF1	4,096,668 – 4,096,788	- - - - - - - - -	2335	4,096,668 – 4,096,788	+	5	120	94.68	-1.37	0.87	0.778310
1410	3R_DroMel_CAF1	4,096,668 – 4,096,788	- - - - - - - - -	2336	4,096,668 – 4,096,788	-	5	120	94.68	-1.64	0.87	0.936430
1411	3R_DroMel_CAF1	4,096,867 – 4,097,183	- - - - - - - - -	2337	4,096,867 – 4,096,985	+	5	120	93.94	-1.39	0.87	0.812047
				2338	4,096,867 – 4,096,985	-	5	120	93.94	-1.44	0.82	0.659507
				2339	4,096,945 – 4,097,064	+	5	120	96.31	-1.35	0.98	0.936693
				2340	4,097,024 – 4,097,143	+	5	120	95.24	-1.79	0.85	0.948744
				2341	4,097,024 – 4,097,143	-	5	120	95.24	-1.64	0.90	0.969377
				2342	4,097,064 – 4,097,183	+	5	120	95.41	-1.27	0.97	0.897378
1412	3R_DroMel_CAF1	4,097,374 – 4,097,562	- - - - - - - - -	2343	4,097,374 – 4,097,494	-	5	120	89.41	-1.75	0.76	0.731902
				2344	4,097,414 – 4,097,534	+	5	120	91.33	-2.52	0.93	0.999849
				2345	4,097,414 – 4,097,534	-	5	120	91.33	-1.99	0.85	0.982113
				2346	4,097,454 – 4,097,562	+	5	120	93.83	-1.85	0.88	0.988350
				2347	4,097,454 – 4,097,562	-	5	120	93.83	-2.60	0.86	0.999011
1413	3R_DroMel_CAF1	4,097,762 – 4,097,864	- - - - - - - - -	2348	4,097,762 – 4,097,864	-	3	102	81.56	-0.74	1.00	0.987091
1414	3R_DroMel_CAF1	4,098,319 – 4,098,439	- - - - - - - - -	2349	4,098,319 – 4,098,439	+	5	120	94.33	-1.67	0.90	0.976349
1415	3R_DroMel_CAF1	4,098,706 – 4,098,866	- - - - - - - - -	2350	4,098,706 – 4,098,826	+	5	120	99.33	-1.31	0.97	0.678648
1415	3R_DroMel_CAF1	4,098,706 – 4,098,866	- - - - - - - - -	2351	4,098,746 – 4,098,866	-	5	120	100.00	-2.31	1.00	0.997525
1416	3R_DroMel_CAF1	4,098,983 – 4,099,316	- - - - - - - - -	2352	4,098,983 – 4,099,094	+	3	114	82.88	-1.99	0.93	0.981970
				2353	4,099,094 – 4,099,206	+	5	120	93.88	-1.18	0.90	0.618631
				2354	4,099,206 – 4,099,316	-	5	120	87.18	-1.72	0.78	0.730319
1417	3R_DroMel_CAF1	4,099,776 – 4,099,936	- - - - - - - - -	2355	4,099,776 – 4,099,896	+	5	120	94.07	-1.31	0.92	0.867471
				2356	4,099,776 – 4,099,896	-	5	120	94.07	-1.38	0.88	0.815891
				2357	4,099,816 – 4,099,936	+	5	120	94.16	-1.53	0.90	0.941614
1418	3R_DroMel_CAF1	4,100,684 – 4,100,918	- - - "knownCDS=texon3254;Parent=CG_RGUI_GID_mRNA_40007539, CG_DGIL_SNO_28363913" - - - - -	2358	4,100,684 – 4,100,804	-	5	120	96.17	-1.26	0.94	0.805056
				2359	4,100,724 – 4,100,844	+	5	120	95.08	-2.24	0.82	0.974873
				2360	4,100,724 – 4,100,844	-	5	120	95.08	-2.32	0.88	0.998064
				2361	4,100,764 – 4,100,878	+	5	120	92.53	-1.66	0.79	0.721895
				2362	4,100,804 – 4,100,918	+	5	120	93.73	-1.77	0.83	0.913393
1419	3R_DroMel_CAF1	4,101,429 – 4,101,579	- - - - - - - - -	2363	4,101,429 – 4,101,539	-	3	120	86.57	-2.12	0.73	0.627827
1419	3R_DroMel_CAF1	4,101,429 – 4,101,579	- - - - - - - - -	2364	4,101,465 – 4,101,579	-	3	120	91.81	-1.60	0.89	0.500000
1420	3R_DroMel_CAF1	4,106,318 – 4,106,441	- - - - - - - - -	2365	4,106,318 – 4,106,420	-	6	120	83.36	-2.76	0.64	0.713360
				2366	4,106,347 – 4,106,441	+	6	101	76.45	-2.51	0.68	0.987681
				2367	4,106,347 – 4,106,441	-	6	101	76.45	-3.01	0.68	0.992356
1421	3R_DroMel_CAF1	4,115,252 – 4,115,352	- - - - - - - - -	2368	4,115,252 – 4,115,352	+	6	115	79.20	-1.82	0.54	0.544098
1422	3R_DroMel_CAF1	4,118,095 – 4,118,202	- - - "knownCDS=Parent=FBtr0081831;Name=CG31463-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31463-RA" - - - - -	2369	4,118,095 – 4,118,202	-	6	110	81.25	-2.05	0.63	0.748036
1423	3R_DroMel_CAF1	4,125,264 – 4,125,384	- - - "knownCDS=Parent=FBtr0081864;Name=CG9626-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9626-RA" - - - - -	2370	4,125,264 – 4,125,384	+	6	120	78.17	-1.76	0.56	0.665279
1424	3R_DroMel_CAF1	4,130,403 – 4,130,563	- - - "knownCDS=Parent=FBtr0081862;Name=CG9617-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9617-RA" - - - - -	2371	4,130,403 – 4,130,523	+	4	120	85.56	-2.01	0.67	0.753929
				2372	4,130,403 – 4,130,523	-	4	120	85.56	-2.12	0.76	0.901734
				2373	4,130,443 – 4,130,563	+	4	120	83.75	-1.49	0.75	0.556138
1425	3R_DroMel_CAF1	4,130,714 – 4,130,831	- - - "knownCDS=Parent=FBtr0081862;Name=CG9617-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9617-RA" - - - - -	2374	4,130,714 – 4,130,831	+	4	120	81.43	-1.76	0.69	0.721756
1426	3R_DroMel_CAF1	4,131,443 – 4,131,545	- - - - - - - - -	2375	4,131,443 – 4,131,545	+	3	118	82.74	-2.06	0.74	0.815302
1427	3R_DroMel_CAF1	4,132,576 – 4,132,667	- - - - - - - - -	2376	4,132,576 – 4,132,667	+	3	96	69.61	-1.64	0.55	0.718031
1428	3R_DroMel_CAF1	4,136,752 – 4,136,847	- - - - - - - - -	2377	4,136,752 – 4,136,847	-	4	95	90.18	-1.82	0.80	0.782959
1429	3R_DroMel_CAF1	4,137,026 – 4,137,223	- - - "knownCDS=Parent=FBtr0081859;Name=CG11694-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11694-RA" - - - - -	2378	4,137,026 – 4,137,143	+	6	120	79.38	-1.97	0.66	0.885119
				2379	4,137,026 – 4,137,143	-	6	120	79.38	-2.28	0.66	0.937060
				2380	4,137,063 – 4,137,183	+	6	120	83.06	-2.83	0.68	0.817066
				2381	4,137,063 – 4,137,183	-	6	120	83.06	-2.66	0.66	0.759398
				2382	4,137,103 – 4,137,223	+	6	120	82.39	-1.82	0.75	0.732392
				2383	4,137,103 – 4,137,223	-	6	120	82.39	-2.17	0.66	0.724473
1430	3R_DroMel_CAF1	4,137,423 – 4,137,623	- - - "knownCDS=Parent=FBtr0081859;Name=CG11694-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11694-RA" - - - - -	2384	4,137,423 – 4,137,543	+	6	120	81.78	-1.46	0.69	0.573845
				2385	4,137,423 – 4,137,543	-	6	120	81.78	-2.19	0.60	0.671698
				2386	4,137,503 – 4,137,623	+	6	120	76.50	-2.49	0.49	0.963225
				2387	4,137,503 – 4,137,623	-	6	120	76.50	-2.16	0.44	0.758046
1431	3R_DroMel_CAF1	4,139,041 – 4,139,156	- - - "knownCDS=Parent=FBtr0081834;Name=eIF4AIII-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7483-RA" - - - - -	2388	4,139,041 – 4,139,156	+	6	120	81.47	-1.51	0.80	0.720642
1432	3R_DroMel_CAF1	4,145,736 – 4,145,856	- - - "knownCDS=Parent=FBtr0081857;Name=Poxm-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9610-RA" - - - - -	2389	4,145,736 – 4,145,856	+	6	120	81.59	-1.34	0.73	0.574779
1433	3R_DroMel_CAF1	4,147,508 – 4,147,603	- - - "knownCDS=Parent=FBtr0081836;Name=Or85a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7454-RA" - - - - -	2390	4,147,508 – 4,147,603	+	5	120	71.81	-1.48	0.59	0.585436
1434	3R_DroMel_CAF1	4,147,800 – 4,147,910	- - - "knownCDS=Parent=FBtr0081836;Name=Or85a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7454-RA" - - - - -	2391	4,147,800 – 4,147,910	-	5	120	73.95	-2.29	0.46	0.983114
1435	3R_DroMel_CAF1	4,148,659 – 4,148,774	- - - "knownCDS=Parent=FBtr0081836;Name=Or85a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7454-RA" - - - - -	2392	4,148,659 – 4,148,755	+	6	120	62.24	-1.74	0.67	0.927831
				2393	4,148,678 – 4,148,774	+	6	120	68.00	-2.32	0.61	0.992262
				2394	4,148,678 – 4,148,774	-	6	120	68.00	-1.34	0.58	0.730749
1436	3R_DroMel_CAF1	4,152,265 – 4,152,370	- - - - - - - - -	2395	4,152,265 – 4,152,370	-	3	120	81.34	-1.77	0.65	0.566527
1437	3R_DroMel_CAF1	4,152,749 – 4,152,843	- - - - - - - - -	2396	4,152,749 – 4,152,843	+	5	120	69.12	-2.02	0.47	0.949452
1437	3R_DroMel_CAF1	4,152,749 – 4,152,843	- - - - - - - - -	2397	4,152,749 – 4,152,843	-	5	120	69.12	-2.03	0.33	0.887200
1438	3R_DroMel_CAF1	4,153,921 – 4,154,024	- - - - - - - - -	2398	4,153,921 – 4,154,024	+	3	103	87.34	-2.15	0.83	0.784375
1439	3R_DroMel_CAF1	4,154,463 – 4,154,571	- - - - - - - - -	2399	4,154,463 – 4,154,571	-	5	120	85.69	-2.06	0.62	0.542546
1440	3R_DroMel_CAF1	4,155,166 – 4,155,286	- - - - - - - - -	2400	4,155,166 – 4,155,286	-	5	120	82.52	-2.50	0.44	0.634501
1441	3R_DroMel_CAF1	4,156,840 – 4,156,933	- - - - - - - - -	2401	4,156,840 – 4,156,933	+	4	95	95.74	-1.76	0.92	0.802089
1441	3R_DroMel_CAF1	4,156,840 – 4,156,933	- - - - - - - - -	2402	4,156,840 – 4,156,933	-	4	95	95.74	-2.12	0.88	0.864036
1442	3R_DroMel_CAF1	4,159,553 – 4,159,647	- - - - - - - - -	2403	4,159,553 – 4,159,647	+	4	112	85.85	-1.90	0.79	0.846289
1443	3R_DroMel_CAF1	4,163,524 – 4,163,657	- - - - - - - - -	2404	4,163,524 – 4,163,620	+	6	108	83.09	-1.61	0.75	0.594924
1443	3R_DroMel_CAF1	4,163,524 – 4,163,657	- - - - - - - - -	2405	4,163,552 – 4,163,657	+	6	109	79.65	-1.52	0.64	0.654786
1444	3R_DroMel_CAF1	4,168,030 – 4,168,150	- - - "knownCDS=Parent=FBtr0081854;Name=CG9601-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9601-RA" - - - - -	2406	4,168,030 – 4,168,150	+	6	120	77.28	-2.15	0.43	0.606197
1445	3R_DroMel_CAF1	4,169,823 – 4,169,916	- - - - - - - - -	2407	4,169,823 – 4,169,916	+	4	119	75.79	-1.09	0.87	0.766150
1446	3R_DroMel_CAF1	4,170,325 – 4,170,468	- - - - - - - - -	2408	4,170,325 – 4,170,437	+	5	120	72.01	-1.99	0.59	0.968446
				2409	4,170,325 – 4,170,437	-	5	120	72.01	-1.82	0.57	0.895430
				2410	4,170,365 – 4,170,468	+	6	120	70.39	-1.67	0.57	0.900504
1447	3R_DroMel_CAF1	4,171,043 – 4,171,157	- - - - - - - - -	2411	4,171,043 – 4,171,157	+	5	120	67.35	-1.72	0.49	0.770122
1448	3R_DroMel_CAF1	4,172,873 – 4,172,993	- - - "knownCDS=Parent=FBtr0081841;Name=DppIII-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7415-RC" - - - - -	2412	4,172,873 – 4,172,993	-	5	120	83.58	-1.90	0.61	0.554637
1449	3R_DroMel_CAF1	4,174,406 – 4,174,526	- - - "knownCDS=Parent=FBtr0081842;Name=CG7352-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7352-RA" - - - - -	2413	4,174,406 – 4,174,526	+	5	120	79.75	-2.05	0.52	0.719290
1450	3R_DroMel_CAF1	4,176,419 – 4,176,539	- - - "knownCDS=Parent=FBtr0081843;Name=CG7331-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7331-RA" - - - - -	2414	4,176,419 – 4,176,539	-	4	120	89.31	-1.42	0.92	0.688511
1451	3R_DroMel_CAF1	4,178,006 – 4,178,113	- - - - - - - - -	2415	4,178,006 – 4,178,113	+	4	120	84.01	-1.93	0.62	0.632222
1452	3R_DroMel_CAF1	4,180,059 – 4,180,174	- - - - - - - - -	2416	4,180,059 – 4,180,174	+	3	120	89.30	-2.78	0.76	0.816725
1452	3R_DroMel_CAF1	4,180,059 – 4,180,174	- - - - - - - - -	2417	4,180,059 – 4,180,174	-	3	120	89.30	-2.16	0.73	0.512697
1453	3R_DroMel_CAF1	4,185,214 – 4,185,324	- - - - - - - - -	2418	4,185,214 – 4,185,324	-	6	115	84.26	-2.20	0.72	0.620642
1454	3R_DroMel_CAF1	4,186,084 – 4,186,201	- - - "knownCDS=Parent=FBtr0081853;Name=CG9684-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9684-RA" - - - - -	2419	4,186,084 – 4,186,201	+	6	117	82.45	-1.84	0.64	0.560149
1455	3R_DroMel_CAF1	4,193,848 – 4,193,942	- - - "knownCDS=Parent=FBtr0081852;Name=CG11718-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11718-RA" - - - - -	2420	4,193,848 – 4,193,942	+	6	94	89.17	-1.46	0.89	0.686709
1456	3R_DroMel_CAF1	4,196,156 – 4,196,251	- - - - - - - - -	2421	4,196,156 – 4,196,251	+	5	97	94.61	-1.82	0.92	0.994724
1456	3R_DroMel_CAF1	4,196,156 – 4,196,251	- - - - - - - - -	2422	4,196,156 – 4,196,251	-	5	97	94.61	-3.22	0.81	0.996931
1457	3R_DroMel_CAF1	4,196,278 – 4,196,369	- - - - - - - - -	2423	4,196,278 – 4,196,369	-	5	92	83.49	-1.62	0.85	0.701335
1458	3R_DroMel_CAF1	4,197,808 – 4,197,912	- - - - - - - - -	2424	4,197,808 – 4,197,912	+	6	116	76.95	-2.10	0.55	0.914109
1458	3R_DroMel_CAF1	4,197,808 – 4,197,912	- - - - - - - - -	2425	4,197,808 – 4,197,912	-	6	116	76.95	-2.37	0.41	0.801336
1459	3R_DroMel_CAF1	4,199,247 – 4,199,353	- - - - - - - - -	2426	4,199,247 – 4,199,353	-	5	107	87.74	-1.46	0.87	0.671229
1460	3R_DroMel_CAF1	4,200,618 – 4,200,787	- - - - - - - - -	2427	4,200,618 – 4,200,717	+	6	102	80.87	-1.91	0.70	0.827454
1460	3R_DroMel_CAF1	4,200,618 – 4,200,787	- - - - - - - - -	2428	4,200,682 – 4,200,787	+	6	106	86.20	-1.79	0.80	0.518485
1461	3R_DroMel_CAF1	4,203,600 – 4,203,759	- - - - - - - - -	2429	4,203,600 – 4,203,700	+	6	103	78.08	-2.10	0.54	0.845953
				2430	4,203,637 – 4,203,727	+	5	92	82.97	-1.66	0.81	0.701708
				2431	4,203,637 – 4,203,727	-	5	92	82.97	-3.35	0.87	0.999183
				2432	4,203,668 – 4,203,759	-	6	97	90.16	-1.47	0.85	0.500000
1462	3R_DroMel_CAF1	4,210,798 – 4,210,889	- - - "knownCDS=Parent=FBtr0081851;Name=CG31462-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31462-RA" - - - - -	2433	4,210,798 – 4,210,889	+	5	91	94.93	-1.98	0.93	0.998488
1462	3R_DroMel_CAF1	4,210,798 – 4,210,889		2434	4,210,798 – 4,210,889	-	5	91	94.93	-1.31	0.88	0.719687
1463	3R_DroMel_CAF1	4,212,411 – 4,212,513	- - - "knownCDS=Parent=FBtr0081851;Name=CG31462-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31462-RA" - - - - -	2435	4,212,411 – 4,212,513	+	6	102	87.65	-2.44	0.80	0.760813
1464	3R_DroMel_CAF1	4,213,687 – 4,213,795	- - - "knownCDS=Parent=FBtr0081851;Name=CG31462-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31462-RA" - - - - -	2436	4,213,687 – 4,213,795	+	6	119	76.36	-1.87	0.64	0.939011
1465	3R_DroMel_CAF1	4,214,201 – 4,214,353	- - - - - - - - -	2437	4,214,201 – 4,214,316	+	6	116	79.03	-2.84	0.66	0.975600
1465	3R_DroMel_CAF1	4,214,201 – 4,214,353	- - - - - - - - -	2438	4,214,236 – 4,214,353	+	6	120	90.53	-2.41	0.83	0.865784
1466	3R_DroMel_CAF1	4,217,248 – 4,217,339	- - - - - - - - -	2439	4,217,248 – 4,217,339	+	4	91	93.59	-1.64	0.89	0.746741
1466	3R_DroMel_CAF1	4,217,248 – 4,217,339	- - - - - - - - -	2440	4,217,248 – 4,217,339	-	4	91	93.59	-2.07	0.87	0.909141
1467	3R_DroMel_CAF1	4,218,522 – 4,218,612	- - - - - - - - -	2441	4,218,522 – 4,218,612	-	6	98	79.89	-1.18	0.72	0.604029
1468	3R_DroMel_CAF1	4,221,846 – 4,221,948	- - - - - - - - -	2442	4,221,846 – 4,221,948	-	6	107	79.53	-1.37	0.67	0.633904
1469	3R_DroMel_CAF1	4,238,982 – 4,239,105	- - - - - - - - -	2443	4,238,982 – 4,239,076	+	6	97	79.60	-1.76	0.73	0.878802
				2444	4,238,982 – 4,239,076	-	6	97	79.60	-1.75	0.78	0.891893
				2445	4,239,000 – 4,239,105	-	6	114	75.35	-1.65	0.69	0.943482
1470	3R_DroMel_CAF1	4,244,148 – 4,244,247	- - - - - - - - -	2446	4,244,148 – 4,244,247	+	6	102	94.80	-2.67	0.83	0.933700
1471	3R_DroMel_CAF1	4,246,150 – 4,246,241	- - - - - - - - -	2447	4,246,150 – 4,246,241	-	6	95	80.94	-2.49	0.50	0.677727
1472	3R_DroMel_CAF1	4,252,313 – 4,252,411	- - - - - - - - -	2448	4,252,313 – 4,252,411	+	4	98	77.87	-2.86	0.43	0.772447
1473	3R_DroMel_CAF1	4,258,754 – 4,258,848	- - - - - - - - -	2449	4,258,754 – 4,258,848	-	5	94	92.55	-1.72	0.84	0.934054
1474	3R_DroMel_CAF1	4,259,754 – 4,259,856	- - - - - - - - -	2450	4,259,754 – 4,259,856	-	3	102	80.72	-1.18	0.89	0.813403
1475	3R_DroMel_CAF1	4,261,637 – 4,261,744	- - - - - - - - -	2451	4,261,637 – 4,261,744	+	5	120	84.31	-1.86	0.65	0.595135
1476	3R_DroMel_CAF1	4,262,295 – 4,262,385	- - - - - - - - -	2452	4,262,295 – 4,262,385	+	6	109	69.51	-1.27	0.62	0.741588
1477	3R_DroMel_CAF1	4,264,473 – 4,264,596	- - - - - - - - -	2453	4,264,473 – 4,264,564	+	5	110	75.66	-1.67	0.54	0.508522
				2454	4,264,486 – 4,264,596	+	6	111	82.48	-2.77	0.57	0.727084
				2455	4,264,486 – 4,264,596	-	6	111	82.48	-2.01	0.64	0.622626
1478	3R_DroMel_CAF1	4,277,318 – 4,277,429	- - - - - - - - -	2456	4,277,318 – 4,277,429	-	5	119	86.93	-1.81	0.76	0.758959
1479	3R_DroMel_CAF1	4,282,234 – 4,282,329	- - - - - - - - -	2457	4,282,234 – 4,282,329	+	5	111	76.91	-2.72	0.54	0.996224
1479	3R_DroMel_CAF1	4,282,234 – 4,282,329	- - - - - - - - -	2458	4,282,234 – 4,282,329	-	5	111	76.91	-2.65	0.53	0.994664
1480	3R_DroMel_CAF1	4,282,998 – 4,283,095	- - - - - - - - -	2459	4,282,998 – 4,283,095	+	6	108	81.06	-1.86	0.56	0.500000
1481	3R_DroMel_CAF1	4,284,508 – 4,284,605	- - - - - - - - -	2460	4,284,508 – 4,284,605	+	6	107	70.81	-2.37	0.31	0.928429
1482	3R_DroMel_CAF1	4,286,327 – 4,286,419	- - - - - - - - -	2461	4,286,327 – 4,286,419	-	6	93	82.13	-1.38	0.74	0.565407
1483	3R_DroMel_CAF1	4,288,100 – 4,288,220	- - - - - - - - -	2462	4,288,100 – 4,288,207	+	4	107	95.64	-2.62	0.92	0.977125
				2463	4,288,100 – 4,288,207	-	4	107	95.64	-3.86	0.97	0.991430
				2464	4,288,128 – 4,288,220	+	4	102	88.40	-2.61	0.70	0.864503
				2465	4,288,128 – 4,288,220	-	4	102	88.40	-2.51	0.81	0.966061
1484	3R_DroMel_CAF1	4,288,308 – 4,288,443	- - - - - - - - -	2466	4,288,308 – 4,288,408	-	5	120	79.03	-2.80	0.47	0.988254
				2467	4,288,333 – 4,288,443	+	5	115	86.31	-1.52	0.74	0.509652
				2468	4,288,333 – 4,288,443	-	5	115	86.31	-2.42	0.61	0.590509
1485	3R_DroMel_CAF1	4,292,244 – 4,292,356	- - - - - - - - -	2469	4,292,244 – 4,292,356	+	4	112	90.67	-1.34	0.88	0.532130
1486	3R_DroMel_CAF1	4,294,563 – 4,294,654	- - - - - - - - -	2470	4,294,563 – 4,294,654	+	5	95	90.31	-1.27	0.96	0.784924
1487	3R_DroMel_CAF1	4,296,093 – 4,296,183	- - - - - - - - -	2471	4,296,093 – 4,296,183	-	3	90	88.89	-2.16	0.72	0.500000
1488	3R_DroMel_CAF1	4,298,116 – 4,298,216	- - - - - - - - -	2472	4,298,116 – 4,298,216	+	6	120	79.56	-1.16	0.75	0.639187
1489	3R_DroMel_CAF1	4,298,883 – 4,298,978	- - - - - - - - -	2473	4,298,883 – 4,298,978	-	5	102	93.05	-1.55	0.83	0.790644
1490	3R_DroMel_CAF1	4,299,135 – 4,299,233	- - - - - - - - -	2474	4,299,135 – 4,299,233	-	6	102	81.41	-2.85	0.60	0.895576
1491	3R_DroMel_CAF1	4,302,696 – 4,302,791	- - - - - - - - -	2475	4,302,696 – 4,302,791	+	6	95	87.20	-2.11	0.82	0.733383
1491	3R_DroMel_CAF1	4,302,696 – 4,302,791	- - - - - - - - -	2476	4,302,696 – 4,302,791	-	6	95	87.20	-2.40	0.85	0.921471
1492	3R_DroMel_CAF1	4,303,975 – 4,304,095	- - - - - - - - -	2477	4,303,975 – 4,304,095	+	4	120	100.00	-2.58	1.00	0.876665
1493	3R_DroMel_CAF1	4,304,132 – 4,304,222	- - - - - - - - -	2478	4,304,132 – 4,304,222	-	3	92	90.44	-1.33	1.00	0.811174
1494	3R_DroMel_CAF1	4,304,726 – 4,304,833	- - - - - - - - -	2479	4,304,726 – 4,304,833	-	3	113	94.05	-1.62	0.95	0.647940
1495	3R_DroMel_CAF1	4,312,591 – 4,312,711	- - - - - - - - -	2480	4,312,591 – 4,312,711	+	3	120	96.39	-2.25	0.85	0.683551
1496	3R_DroMel_CAF1	4,312,951 – 4,313,071	- - - - - - - - -	2481	4,312,951 – 4,313,071	-	3	120	94.72	-1.85	0.86	0.500000
1497	3R_DroMel_CAF1	4,313,225 – 4,313,423	- - - - - - - - -	2482	4,313,225 – 4,313,343	-	3	120	76.75	-1.55	0.70	0.794675
1497	3R_DroMel_CAF1	4,313,225 – 4,313,423	- - - - - - - - -	2483	4,313,303 – 4,313,423	-	3	120	98.89	-2.57	1.01	0.980923
1498	3R_DroMel_CAF1	4,313,503 – 4,313,623	- - - - - - - - -	2484	4,313,503 – 4,313,623	+	3	120	99.44	-1.60	1.00	0.729868
1499	3R_DroMel_CAF1	4,314,021 – 4,314,141	- - - - - - - - -	2485	4,314,021 – 4,314,141	-	3	120	98.89	-2.03	0.95	0.836848
1500	3R_DroMel_CAF1	4,315,698 – 4,315,818	- - - - - - - - -	2486	4,315,698 – 4,315,818	-	3	120	99.44	-1.62	1.00	0.742018
1501	3R_DroMel_CAF1	4,315,978 – 4,316,278	- - - - - - - - -	2487	4,315,978 – 4,316,082	+	3	120	86.47	-1.88	0.85	0.739972
				2488	4,315,978 – 4,316,082	-	3	120	86.47	-2.33	0.87	0.927398
				2489	4,316,018 – 4,316,122	+	3	120	84.75	-1.65	0.78	0.528460
				2490	4,316,018 – 4,316,122	-	3	120	84.75	-2.45	0.87	0.961647
				2491	4,316,042 – 4,316,160	+	3	120	91.55	-2.81	0.83	0.879981
				2492	4,316,042 – 4,316,160	-	3	120	91.55	-3.21	0.96	0.993748
				2493	4,316,160 – 4,316,278	-	3	120	91.62	-1.79	0.88	0.584572
1502	3R_DroMel_CAF1	4,316,398 – 4,316,557	- - - - - - - - -	2494	4,316,398 – 4,316,517	-	3	120	96.66	-1.82	0.90	0.576222
1502	3R_DroMel_CAF1	4,316,398 – 4,316,557	- - - - - - - - -	2495	4,316,438 – 4,316,557	+	3	120	94.99	-2.12	0.90	0.777817
1503	3R_DroMel_CAF1	4,317,336 – 4,317,496	- - - - - - - - -	2496	4,317,336 – 4,317,456	+	3	120	97.22	-2.11	0.85	0.575307
				2497	4,317,336 – 4,317,456	-	3	120	97.22	-2.25	0.89	0.782490
				2498	4,317,376 – 4,317,496	+	3	120	97.78	-1.74	0.90	0.522468
1504	3R_DroMel_CAF1	4,317,899 – 4,318,169	- - - - - - - - -	2499	4,317,899 – 4,318,015	-	3	120	87.92	-1.65	0.85	0.537663
				2500	4,317,975 – 4,318,095	-	3	120	99.44	-1.51	0.97	0.584702
				2501	4,318,015 – 4,318,129	-	3	120	92.09	-3.86	0.80	0.909575
				2502	4,318,055 – 4,318,169	+	3	120	90.68	-1.90	0.89	0.740512
1505	3R_DroMel_CAF1	4,318,563 – 4,318,683	- - - - - - - - -	2503	4,318,563 – 4,318,683	+	3	120	90.91	-1.74	0.94	0.786679
1506	3R_DroMel_CAF1	4,319,328 – 4,319,441	- - - - - - - - -	2504	4,319,328 – 4,319,441	-	3	120	80.70	-1.99	0.68	0.826711
1507	3R_DroMel_CAF1	4,320,045 – 4,320,361	- - - - - - - - -	2505	4,320,045 – 4,320,163	+	3	120	97.21	-1.91	0.97	0.851958
				2506	4,320,085 – 4,320,203	+	3	120	97.21	-2.50	0.97	0.964578
				2507	4,320,085 – 4,320,203	-	3	120	97.21	-1.60	1.00	0.732774
				2508	4,320,125 – 4,320,243	-	3	120	97.21	-1.81	0.95	0.731152
				2509	4,320,163 – 4,320,283	-	3	120	98.33	-1.67	0.97	0.709014
				2510	4,320,243 – 4,320,361	-	3	120	93.02	-1.84	0.85	0.500000
1508	3R_DroMel_CAF1	4,320,481 – 4,320,593	- - - - - - - - -	2511	4,320,481 – 4,320,593	+	3	120	84.66	-3.20	0.79	0.977465
1509	3R_DroMel_CAF1	4,320,979 – 4,321,099	- - - - - - - - -	2512	4,320,979 – 4,321,099	-	3	120	98.89	-1.52	0.99	0.654715
1510	3R_DroMel_CAF1	4,321,139 – 4,321,326	- - - - - - - - -	2513	4,321,139 – 4,321,246	-	3	120	89.14	-2.20	0.85	0.809335
				2514	4,321,166 – 4,321,286	+	3	120	98.89	-1.99	0.96	0.831383
				2515	4,321,206 – 4,321,326	-	3	120	98.89	-1.45	1.00	0.629568
1511	3R_DroMel_CAF1	4,322,160 – 4,322,280	- - - - - - - - -	2516	4,322,160 – 4,322,280	-	5	120	90.83	-1.63	0.79	0.741693
1512	3R_DroMel_CAF1	4,323,711 – 4,323,827	- - - - - - - - -	2517	4,323,711 – 4,323,827	-	5	120	84.76	-2.83	0.59	0.852491
1513	3R_DroMel_CAF1	4,323,895 – 4,323,989	- - - - - - - - -	2518	4,323,895 – 4,323,989	+	5	94	95.96	-1.36	0.88	0.758690
1513	3R_DroMel_CAF1	4,323,895 – 4,323,989	- - - - - - - - -	2519	4,323,895 – 4,323,989	-	5	94	95.96	-1.66	0.87	0.920669
1514	3R_DroMel_CAF1	4,324,429 – 4,324,546	- - - - - - - - -	2520	4,324,429 – 4,324,546	-	5	120	90.25	-1.61	0.81	0.770046
1515	3R_DroMel_CAF1	4,325,149 – 4,325,245	- - - - - - - - -	2521	4,325,149 – 4,325,245	-	6	116	78.56	-2.26	0.46	0.685180
1516	3R_DroMel_CAF1	4,326,783 – 4,326,890	- - - - - - - - -	2522	4,326,783 – 4,326,890	-	6	120	78.41	-2.00	0.56	0.806347
1517	3R_DroMel_CAF1	4,327,148 – 4,327,264	- - - - - - - - -	2523	4,327,148 – 4,327,264	+	5	116	95.97	-1.03	1.00	0.594896
1518	3R_DroMel_CAF1	4,328,792 – 4,328,933	- - - - - - - - -	2524	4,328,792 – 4,328,893	+	6	119	79.49	-1.53	0.73	0.815651
1518	3R_DroMel_CAF1	4,328,792 – 4,328,933	- - - - - - - - -	2525	4,328,819 – 4,328,933	+	6	120	76.48	-1.64	0.64	0.877115
1519	3R_DroMel_CAF1	4,331,837 – 4,331,935	- - - - - - - - -	2526	4,331,837 – 4,331,935	+	6	107	81.82	-1.55	0.71	0.637703
1520	3R_DroMel_CAF1	4,335,556 – 4,335,653	- - - - - - - - -	2527	4,335,556 – 4,335,653	+	6	101	91.86	-1.95	0.82	0.578928
1520	3R_DroMel_CAF1	4,335,556 – 4,335,653	- - - - - - - - -	2528	4,335,556 – 4,335,653	-	6	101	91.86	-1.98	0.85	0.808399
1521	3R_DroMel_CAF1	4,341,295 – 4,341,385	- - - - - - - - -	2529	4,341,295 – 4,341,385	+	6	97	88.37	-1.86	0.88	0.881141
1522	3R_DroMel_CAF1	4,347,768 – 4,347,888	- - - "knownCDS=Parent=FBtr0081870;Name=CG31454-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31454-RA" - - - - -	2530	4,347,768 – 4,347,888	+	5	120	92.25	-1.50	0.85	0.827622
1523	3R_DroMel_CAF1	4,348,137 – 4,348,257	- - - "knownCDS=Parent=FBtr0081870;Name=CG31454-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31454-RA" - - - - -	2531	4,348,137 – 4,348,257	+	5	120	93.42	-1.51	0.90	0.942639
1523	3R_DroMel_CAF1	4,348,137 – 4,348,257		2532	4,348,137 – 4,348,257	-	5	120	93.42	-1.75	0.95	0.995966
1524	3R_DroMel_CAF1	4,352,072 – 4,352,170	- - - - - - - - -	2533	4,352,072 – 4,352,170	-	5	101	92.01	-1.31	0.89	0.749267
1525	3R_DroMel_CAF1	4,352,230 – 4,352,343	- - - - - - - - -	2534	4,352,230 – 4,352,343	-	5	114	85.02	-2.04	0.60	0.500000
1526	3R_DroMel_CAF1	4,357,706 – 4,357,814	- - - - - - - - -	2535	4,357,706 – 4,357,814	+	6	119	78.48	-1.35	0.64	0.575726
1527	3R_DroMel_CAF1	4,358,407 – 4,358,498	- - - - - - - - -	2536	4,358,407 – 4,358,498	+	6	111	79.11	-1.34	0.64	0.558288
1528	3R_DroMel_CAF1	4,359,611 – 4,359,703	- - - - - - - - -	2537	4,359,611 – 4,359,703	+	4	117	83.90	-2.20	0.70	0.907300
1529	3R_DroMel_CAF1	4,363,861 – 4,363,960	- - - - - - - - -	2538	4,363,861 – 4,363,960	+	5	115	81.31	-1.55	0.76	0.626252
1530	3R_DroMel_CAF1	4,368,656 – 4,368,751	- - - - - - - - -	2539	4,368,656 – 4,368,751	+	6	97	80.96	-1.31	0.72	0.601366
1531	3R_DroMel_CAF1	4,368,785 – 4,368,880	- - - - - - - - -	2540	4,368,785 – 4,368,880	+	5	100	88.07	-1.39	0.86	0.595822
1532	3R_DroMel_CAF1	4,373,974 – 4,374,079	- - - - - - - - -	2541	4,373,974 – 4,374,079	-	5	107	82.12	-1.80	0.71	0.728953
1533	3R_DroMel_CAF1	4,376,386 – 4,376,489	- - - - - - - - -	2542	4,376,386 – 4,376,489	-	6	113	84.01	-1.83	0.72	0.536599
1534	3R_DroMel_CAF1	4,380,191 – 4,380,299	- - - - - - - - -	2543	4,380,191 – 4,380,299	+	6	108	78.53	-1.69	0.57	0.607474
1535	3R_DroMel_CAF1	4,383,803 – 4,383,903	- - - - - - - - -	2544	4,383,803 – 4,383,903	-	5	105	73.92	-2.09	0.38	0.935462
1536	3R_DroMel_CAF1	4,390,719 – 4,390,839	- - - "knownCDS=Parent=FBtr0089973;Name=CG31258-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31258-RA" - - - - -	2545	4,390,719 – 4,390,839	-	5	120	86.83	-1.63	0.77	0.639410
1537	3R_DroMel_CAF1	4,391,239 – 4,391,359	- - - "knownCDS=Parent=FBtr0089973;Name=CG31258-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31258-RA" - - - - -	2546	4,391,239 – 4,391,359	-	5	120	85.42	-1.85	0.65	0.527913
1538	3R_DroMel_CAF1	4,391,599 – 4,391,719	- - - "knownCDS=Parent=FBtr0089973;Name=CG31258-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31258-RA" - - - - -	2547	4,391,599 – 4,391,719	-	5	120	95.58	-1.74	0.87	0.956402
1539	3R_DroMel_CAF1	4,392,299 – 4,392,419	- - - "knownCDS=Parent=FBtr0089973;Name=CG31258-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31258-RA" - - - - -	2548	4,392,299 – 4,392,419	-	5	120	83.75	-1.73	0.67	0.566620
1540	3R_DroMel_CAF1	4,392,696 – 4,392,816	- - - "knownCDS=Parent=FBtr0089973;Name=CG31258-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31258-RA" - - - - -	2549	4,392,696 – 4,392,816	+	4	120	86.25	-1.80	0.63	0.523019
1540	3R_DroMel_CAF1	4,392,696 – 4,392,816		2550	4,392,696 – 4,392,816	-	4	120	86.25	-1.91	0.69	0.733980
1541	3R_DroMel_CAF1	4,410,006 – 4,410,114	- - - - - - - - -	2551	4,410,006 – 4,410,114	+	6	117	81.71	-2.18	0.79	0.888964
1542	3R_DroMel_CAF1	4,415,258 – 4,415,349	- - - - - - - - -	2552	4,415,258 – 4,415,349	-	6	91	82.66	-2.22	0.59	0.545188
1543	3R_DroMel_CAF1	4,416,354 – 4,416,453	- - - - - - - - -	2553	4,416,354 – 4,416,453	+	6	107	79.19	-1.82	0.56	0.644665
1544	3R_DroMel_CAF1	4,418,885 – 4,418,985	- - - - - - - - -	2554	4,418,885 – 4,418,985	-	5	100	89.70	-2.08	0.77	0.890020
1545	3R_DroMel_CAF1	4,419,401 – 4,419,499	- - - - - - - - -	2555	4,419,401 – 4,419,499	+	5	98	92.19	-2.16	0.85	0.991439
1546	3R_DroMel_CAF1	4,421,856 – 4,421,954	- - - - - - - - -	2556	4,421,856 – 4,421,954	-	6	105	80.99	-2.24	0.71	0.889645
1547	3R_DroMel_CAF1	4,425,821 – 4,425,920	- - - - - - - - -	2557	4,425,821 – 4,425,920	-	6	104	80.32	-3.17	0.57	0.960660
1548	3R_DroMel_CAF1	4,426,332 – 4,426,489	- - - - - - - - -	2558	4,426,332 – 4,426,449	+	5	117	94.19	-2.88	0.90	0.999868
				2559	4,426,332 – 4,426,449	-	5	117	94.19	-1.99	0.87	0.991013
				2560	4,426,372 – 4,426,489	+	5	117	93.33	-2.04	0.86	0.990081
				2561	4,426,372 – 4,426,489	-	5	117	93.33	-1.77	0.87	0.972466
1549	3R_DroMel_CAF1	4,444,760 – 4,444,852	- - - - - - - - -	2562	4,444,760 – 4,444,852	-	6	92	91.19	-2.07	0.83	0.747424
1550	3R_DroMel_CAF1	4,446,017 – 4,446,137	- - - "knownCDS=Parent=FBtr0081876, FBtr0081877;Name=CG8007-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8007-RA, FlyBase+Annotation+IDs:CG8007-RB" - - - - -	2563	4,446,017 – 4,446,137	+	6	120	87.89	-2.03	0.82	0.703652
1551	3R_DroMel_CAF1	4,447,056 – 4,447,146	- - - - - - - - -	2564	4,447,056 – 4,447,146	-	5	94	85.26	-2.07	0.62	0.564645
1552	3R_DroMel_CAF1	4,450,404 – 4,450,507	- - - - - - - - -	2565	4,450,404 – 4,450,507	-	6	105	84.97	-2.78	0.74	0.753692
1553	3R_DroMel_CAF1	4,452,120 – 4,452,239	- - - "knownCDS=Parent=FBtr0081876;Name=CG8007-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8007-RA" - - - - -	2566	4,452,120 – 4,452,239	+	6	119	79.61	-2.07	0.55	0.717696
1554	3R_DroMel_CAF1	4,456,416 – 4,456,508	- - - - - - - - -	2567	4,456,416 – 4,456,508	+	6	99	79.58	-2.12	0.61	0.861906
1554	3R_DroMel_CAF1	4,456,416 – 4,456,508	- - - - - - - - -	2568	4,456,416 – 4,456,508	-	6	99	79.58	-2.63	0.65	0.956248
1555	3R_DroMel_CAF1	4,457,794 – 4,457,889	- - - - - - - - -	2569	4,457,794 – 4,457,889	+	6	113	74.28	-1.90	0.62	0.958851
1556	3R_DroMel_CAF1	4,458,879 – 4,458,978	- - - - - - - - -	2570	4,458,879 – 4,458,978	-	6	109	73.79	-2.36	0.48	0.978126
1557	3R_DroMel_CAF1	4,460,483 – 4,460,585	- - - - - - - - -	2571	4,460,483 – 4,460,585	-	6	113	80.25	-1.82	0.73	0.862376
1558	3R_DroMel_CAF1	4,461,340 – 4,461,500	- - - - - - - - -	2572	4,461,340 – 4,461,460	-	6	120	81.06	-1.52	0.64	0.549082
				2573	4,461,380 – 4,461,500	+	6	120	78.22	-2.12	0.51	0.777860
				2574	4,461,380 – 4,461,500	-	6	120	78.22	-2.27	0.58	0.933877
1559	3R_DroMel_CAF1	4,462,434 – 4,462,542	- - - - - - - - -	2575	4,462,434 – 4,462,542	+	5	108	96.85	-1.35	0.92	0.809729
1560	3R_DroMel_CAF1	4,471,201 – 4,471,311	- - - - - - - - -	2576	4,471,201 – 4,471,311	-	5	110	85.81	-1.81	0.79	0.799613
1561	3R_DroMel_CAF1	4,478,925 – 4,479,037	- - - "knownCDS=Parent=FBtr0081879;Name=CG11753-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11753-RA" - - - - -	2577	4,478,925 – 4,479,037	+	6	117	76.27	-1.25	0.68	0.736121
1562	3R_DroMel_CAF1	4,480,206 – 4,480,309	- - - - - - - - -	2578	4,480,206 – 4,480,309	-	6	120	79.55	-1.94	0.57	0.727846
1563	3R_DroMel_CAF1	4,480,411 – 4,480,503	- - - - - - - - -	2579	4,480,411 – 4,480,503	+	5	97	87.71	-2.72	0.95	0.999787
1563	3R_DroMel_CAF1	4,480,411 – 4,480,503	- - - - - - - - -	2580	4,480,411 – 4,480,503	-	5	97	87.71	-1.69	0.84	0.839304
1564	3R_DroMel_CAF1	4,492,390 – 4,492,491	- - - - - - - - -	2581	4,492,390 – 4,492,491	-	6	101	77.41	-2.00	0.58	0.888936
1565	3R_DroMel_CAF1	4,494,330 – 4,494,445	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000207;Name=Dmel_Tyr_GTA_14000207;TFAMID=DmelYGTA-4494427" "tRNAscan=type:Tyr:anticodon:GTA f:4494333_t:4494429_strand=-_cove=79.90" - - "Rfam=AC007571.6/2221-2314_RF00005;tRNA;\|4e-43" - - "ncRNAdb=MmuscAK041031_unclassifiable\|4e-07" "Flybase=FBgn0012025:transfer_RNA:tyr1:85Ab:cytosolic_tRNA_gene\|9e-50"	2582	4,494,330 – 4,494,445	+	5	116	93.50	-1.48	0.93	0.962427
1566	3R_DroMel_CAF1	4,495,736 – 4,495,881	- - - - - - - - -	2583	4,495,736 – 4,495,841	-	5	105	85.32	-1.70	0.84	0.781255
1566	3R_DroMel_CAF1	4,495,736 – 4,495,881	- - - - - - - - -	2584	4,495,761 – 4,495,881	-	5	120	74.68	-1.74	0.64	0.874830
1567	3R_DroMel_CAF1	4,497,242 – 4,497,365	- - - - - - - - -	2585	4,497,242 – 4,497,333	+	4	95	75.99	-1.96	0.59	0.824545
1567	3R_DroMel_CAF1	4,497,242 – 4,497,365	- - - - - - - - -	2586	4,497,272 – 4,497,365	+	4	103	79.04	-1.87	0.61	0.685989
1568	3R_DroMel_CAF1	4,499,747 – 4,499,852	- - - - - - - - -	2587	4,499,747 – 4,499,852	+	4	106	84.68	-1.66	0.71	0.657214
1568	3R_DroMel_CAF1	4,499,747 – 4,499,852	- - - - - - - - -	2588	4,499,747 – 4,499,852	-	4	106	84.68	-2.42	0.77	0.963295
1569	3R_DroMel_CAF1	4,501,188 – 4,501,283	- - - - - - - - -	2589	4,501,188 – 4,501,283	+	6	97	79.28	-1.43	0.65	0.643983
1570	3R_DroMel_CAF1	4,503,047 – 4,503,207	- - - "knownCDS=Parent=FBtr0081902;Name=CG8043-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8043-RA" - - - - -	2590	4,503,047 – 4,503,167	+	5	120	94.67	-1.46	0.90	0.915009
				2591	4,503,047 – 4,503,167	-	5	120	94.67	-1.49	0.95	0.976002
				2592	4,503,087 – 4,503,207	+	5	120	95.25	-2.60	0.94	0.999904
				2593	4,503,087 – 4,503,207	-	5	120	95.25	-2.63	0.94	0.999931
1571	3R_DroMel_CAF1	4,503,287 – 4,503,407	- - - "knownCDS=Parent=FBtr0081902;Name=CG8043-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8043-RA" - - - - -	2594	4,503,287 – 4,503,407	-	5	120	94.17	-1.73	0.84	0.928963
1572	3R_DroMel_CAF1	4,503,560 – 4,503,720	- - - "knownCDS=Parent=FBtr0081902;Name=CG8043-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8043-RA" - - - - -	2595	4,503,560 – 4,503,680	+	5	120	94.17	-1.71	0.91	0.987638
				2596	4,503,600 – 4,503,720	+	5	120	95.17	-3.97	0.91	0.999946
				2597	4,503,600 – 4,503,720	-	5	120	95.17	-1.31	0.88	0.700021
1573	3R_DroMel_CAF1	4,504,315 – 4,504,475	- - - "knownCDS=Parent=FBtr0081903;Name=CG11755-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11755-RA" - - - - -	2598	4,504,315 – 4,504,435	-	5	120	91.08	-1.43	0.79	0.552888
1573	3R_DroMel_CAF1	4,504,315 – 4,504,475		2599	4,504,355 – 4,504,475	+	5	120	88.25	-2.44	0.80	0.984435
1574	3R_DroMel_CAF1	4,506,081 – 4,506,178	- - - - - - - - -	2600	4,506,081 – 4,506,178	-	6	109	78.64	-2.31	0.42	0.555185
1575	3R_DroMel_CAF1	4,506,554 – 4,506,767	- - - - - - - - -	2601	4,506,554 – 4,506,647	-	4	93	87.34	-1.98	0.66	0.654934
				2602	4,506,612 – 4,506,706	+	6	105	76.75	-1.24	0.64	0.552924
				2603	4,506,647 – 4,506,744	+	6	105	74.75	-1.37	0.62	0.698929
				2604	4,506,647 – 4,506,744	-	6	105	74.75	-2.18	0.62	0.981893
				2605	4,506,675 – 4,506,767	-	4	101	68.10	-2.24	0.40	0.653134
1576	3R_DroMel_CAF1	4,509,316 – 4,509,435	- - - - - - - - -	2606	4,509,316 – 4,509,435	-	5	119	90.97	-1.85	0.80	0.903831
1577	3R_DroMel_CAF1	4,510,138 – 4,510,242	- - - - - - - - -	2607	4,510,138 – 4,510,242	+	6	119	78.47	-2.37	0.52	0.891040
1578	3R_DroMel_CAF1	4,510,291 – 4,510,388	- - - - - - - - -	2608	4,510,291 – 4,510,388	-	5	99	91.64	-1.63	0.74	0.500000
1579	3R_DroMel_CAF1	4,521,501 – 4,521,597	- - - - - - - - -	2609	4,521,501 – 4,521,597	+	6	111	76.63	-1.66	0.59	0.767416
1580	3R_DroMel_CAF1	4,522,560 – 4,522,665	- - - - - - - - -	2610	4,522,560 – 4,522,665	-	4	106	86.64	-1.51	0.67	0.517639
1581	3R_DroMel_CAF1	4,525,061 – 4,525,152	- - - - - - - - -	2611	4,525,061 – 4,525,152	-	6	102	76.75	-1.30	0.63	0.573284
1582	3R_DroMel_CAF1	4,531,704 – 4,531,805	- - - - - - - - -	2612	4,531,704 – 4,531,805	-	5	101	90.79	-2.88	0.76	0.982214
1583	3R_DroMel_CAF1	4,536,916 – 4,537,017	- - - - - - - - -	2613	4,536,916 – 4,537,017	+	5	116	72.67	-1.68	0.28	0.585050
1583	3R_DroMel_CAF1	4,536,916 – 4,537,017	- - - - - - - - -	2614	4,536,916 – 4,537,017	-	5	116	72.67	-2.56	0.28	0.996454
1584	3R_DroMel_CAF1	4,539,546 – 4,539,656	- - - - - - - - -	2615	4,539,546 – 4,539,656	-	4	120	83.07	-2.02	0.68	0.829915
1585	3R_DroMel_CAF1	4,542,075 – 4,542,175	- - - - - - - - -	2616	4,542,075 – 4,542,175	+	4	100	92.03	-2.17	0.82	0.894714
1585	3R_DroMel_CAF1	4,542,075 – 4,542,175	- - - - - - - - -	2617	4,542,075 – 4,542,175	-	4	100	92.03	-2.73	0.79	0.926719
1586	3R_DroMel_CAF1	4,542,846 – 4,542,966	- - - "knownCDS=Parent=FBtr0081905;Name=CG8116-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8116-RA" - - - - -	2618	4,542,846 – 4,542,966	+	6	120	89.67	-1.91	0.87	0.860165
1587	3R_DroMel_CAF1	4,543,190 – 4,543,284	- - - - - - - - -	2619	4,543,190 – 4,543,284	+	5	94	88.78	-2.51	0.70	0.840694
1587	3R_DroMel_CAF1	4,543,190 – 4,543,284	- - - - - - - - -	2620	4,543,190 – 4,543,284	-	5	94	88.78	-2.60	0.69	0.805540
1588	3R_DroMel_CAF1	4,552,727 – 4,552,834	- - - - - - - - -	2621	4,552,727 – 4,552,834	-	6	115	76.36	-1.33	0.67	0.773363
1589	3R_DroMel_CAF1	4,561,263 – 4,561,374	- - - "knownCDS=Parent=FBtr0081914;Name=CG8202-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8202-RA" - - - - -	2622	4,561,263 – 4,561,374	+	6	111	81.05	-1.62	0.61	0.509784
1589	3R_DroMel_CAF1	4,561,263 – 4,561,374		2623	4,561,263 – 4,561,374	-	6	111	81.05	-2.74	0.52	0.814534
1590	3R_DroMel_CAF1	4,563,663 – 4,563,776	- - - "knownCDS=Parent=FBtr0081945, FBtr0081946;Name=CG9801-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9801-RB, FlyBase+Annotation+IDs:CG9801-RC" - - - - -	2624	4,563,663 – 4,563,776	-	6	120	80.51	-1.59	0.62	0.585887
1591	3R_DroMel_CAF1	4,566,166 – 4,566,360	- - - - - - - - -	2625	4,566,166 – 4,566,281	+	5	115	93.54	-1.30	0.82	0.500000
				2626	4,566,166 – 4,566,281	-	5	115	93.54	-1.32	0.85	0.655144
				2627	4,566,241 – 4,566,360	+	5	119	95.55	-1.30	1.02	0.950038
1592	3R_DroMel_CAF1	4,568,858 – 4,568,995	- - - - - - - - -	2628	4,568,858 – 4,568,969	+	4	111	92.64	-1.60	0.87	0.707099
				2629	4,568,858 – 4,568,969	-	4	111	92.64	-2.28	0.83	0.915082
				2630	4,568,891 – 4,568,995	-	5	109	76.51	-1.87	0.44	0.621818
1593	3R_DroMel_CAF1	4,573,961 – 4,574,056	- - "RNAmicro=f:4573961_t:4574057_strand:-_p:0.507720" - - - - - -	2631	4,573,961 – 4,574,056	+	5	97	94.42	-3.97	0.95	0.999984
1593	3R_DroMel_CAF1	4,573,961 – 4,574,056		2632	4,573,961 – 4,574,056	-	5	97	94.42	-1.95	0.91	0.997005
1594	3R_DroMel_CAF1	4,574,738 – 4,574,828	- - - - - - - - -	2633	4,574,738 – 4,574,828	-	4	90	93.89	-2.57	0.89	0.978361
1595	3R_DroMel_CAF1	4,575,771 – 4,575,931	- - - - - - - - -	2634	4,575,771 – 4,575,862	+	4	96	90.43	-2.00	0.77	0.799513
				2635	4,575,771 – 4,575,862	-	4	96	90.43	-1.84	0.79	0.762291
				2636	4,575,826 – 4,575,931	-	5	113	85.93	-1.71	0.73	0.629702
1596	3R_DroMel_CAF1	4,581,277 – 4,581,379	- - - "knownCDS=Parent=FBtr0081943;Name=CG11768-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11768-RA" - - - - -	2637	4,581,277 – 4,581,379	-	6	108	85.13	-1.82	0.77	0.533245
1597	3R_DroMel_CAF1	4,586,035 – 4,586,129	- - - - - - - - -	2638	4,586,035 – 4,586,129	+	5	96	81.90	-2.28	0.49	0.664274
1598	3R_DroMel_CAF1	4,597,803 – 4,597,914	- - - "knownCDS=Parent=FBtr0081942;Name=CG13318-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13318-RA" - - - - -	2639	4,597,803 – 4,597,914	-	6	117	79.33	-1.38	0.67	0.655891
1599	3R_DroMel_CAF1	4,598,059 – 4,598,170	- - - "knownCDS=Parent=FBtr0081942;Name=CG13318-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13318-RA" - - - - -	2640	4,598,059 – 4,598,170	+	6	114	77.74	-1.93	0.50	0.620250
1600	3R_DroMel_CAF1	4,612,580 – 4,612,675	- - - "knownCDS=Parent=FBtr0091714;Name=Pif1A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33719-RA" - - - - -	2641	4,612,580 – 4,612,675	+	6	95	83.79	-1.49	0.77	0.500000
1601	3R_DroMel_CAF1	4,613,300 – 4,613,391	- - - - - - - - -	2642	4,613,300 – 4,613,391	-	4	91	79.85	-2.56	0.57	0.943208
1602	3R_DroMel_CAF1	4,614,829 – 4,614,933	- - - - - - - - -	2643	4,614,829 – 4,614,933	+	4	106	83.94	-1.79	0.63	0.588143
1603	3R_DroMel_CAF1	4,617,741 – 4,617,841	- - - - - - - - -	2644	4,617,741 – 4,617,841	+	5	100	84.11	-1.49	0.87	0.583746
1603	3R_DroMel_CAF1	4,617,741 – 4,617,841	- - - - - - - - -	2645	4,617,741 – 4,617,841	-	5	100	84.11	-1.68	0.72	0.606798
1604	3R_DroMel_CAF1	4,620,260 – 4,620,350	- - - - - - - - -	2646	4,620,260 – 4,620,350	+	6	99	85.15	-3.19	0.69	0.714928
1604	3R_DroMel_CAF1	4,620,260 – 4,620,350	- - - - - - - - -	2647	4,620,260 – 4,620,350	-	6	99	85.15	-3.74	0.74	0.906195
1605	3R_DroMel_CAF1	4,623,492 – 4,623,597	- - - "knownCDS=Parent=FBtr0081935;Name=CG11776-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11776-RA" - - - - -	2648	4,623,492 – 4,623,597	+	6	108	72.21	-2.26	0.39	0.935825
1606	3R_DroMel_CAF1	4,623,905 – 4,624,017	- - - - - - - - -	2649	4,623,905 – 4,624,017	+	5	112	96.88	-1.91	0.88	0.978488
1607	3R_DroMel_CAF1	4,624,208 – 4,624,312	- - - - - - - - -	2650	4,624,208 – 4,624,312	+	3	104	79.32	-1.44	0.71	0.555624
1607	3R_DroMel_CAF1	4,624,208 – 4,624,312	- - - - - - - - -	2651	4,624,208 – 4,624,312	-	3	104	79.32	-1.42	0.71	0.538531
1608	3R_DroMel_CAF1	4,640,236 – 4,640,346	- - - - - - - - -	2652	4,640,236 – 4,640,346	-	6	115	80.92	-3.74	0.79	0.965418
1609	3R_DroMel_CAF1	4,651,049 – 4,651,155	- - - "knownCDS=Parent=FBtr0081921;Name=CG8379-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8379-RA" - - - - -	2653	4,651,049 – 4,651,155	-	6	106	80.80	-1.52	0.77	0.754854
1610	3R_DroMel_CAF1	4,651,193 – 4,651,310	- - - - - - - - -	2654	4,651,193 – 4,651,310	-	5	120	80.68	-2.37	0.57	0.917696
1611	3R_DroMel_CAF1	4,655,072 – 4,655,192	- - - "knownCDS=Parent=FBtr0089784;Name=pyd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31349-RA" - - - - -	2655	4,655,072 – 4,655,162	+	6	102	80.28	-1.89	0.72	0.866268
1611	3R_DroMel_CAF1	4,655,072 – 4,655,192		2656	4,655,102 – 4,655,192	+	6	96	80.29	-2.93	0.74	0.959560
1612	3R_DroMel_CAF1	4,658,052 – 4,658,160	- - - "knownCDS=Parent=FBtr0089783, FBtr0089784;Name=pyd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31349-RC, FlyBase+Annotation+IDs:CG31349-RA" - - - - -	2657	4,658,052 – 4,658,160	+	6	118	74.57	-1.20	0.63	0.552861
1613	3R_DroMel_CAF1	4,658,201 – 4,658,294	- - - "knownCDS=Parent=FBtr0089782;Name=pyd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31349-RB" - - - - -	2658	4,658,201 – 4,658,294	+	5	96	87.47	-1.90	0.76	0.809005
1614	3R_DroMel_CAF1	4,658,415 – 4,658,522	- - - "knownCDS=Parent=FBtr0089783, FBtr0089784;Name=pyd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31349-RC, FlyBase+Annotation+IDs:CG31349-RA" - - - - -	2659	4,658,415 – 4,658,522	+	6	120	78.84	-1.61	0.66	0.790710
1615	3R_DroMel_CAF1	4,659,398 – 4,659,500	- - - - - - - - -	2660	4,659,398 – 4,659,500	+	6	102	82.09	-1.48	0.67	0.510871
1616	3R_DroMel_CAF1	4,662,757 – 4,662,876	- - - "knownCDS=texon11295;Parent=CG_RGUI_GID_mRNA_40007620, CG_DGIL_SNO_28364051" - - - - -	2661	4,662,757 – 4,662,876	-	4	120	68.70	-2.27	0.51	0.985884
1617	3R_DroMel_CAF1	4,668,787 – 4,668,881	- - - - - - - - -	2662	4,668,787 – 4,668,881	-	6	108	83.48	-2.08	0.65	0.542068
1618	3R_DroMel_CAF1	4,687,554 – 4,687,712	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000209;Name=Dmel_Arg_TCG_14000209;TFAMID=DmelRTCG-4687602" "tRNAscan=type:Arg:anticodon:TCG f:4687601_t:4687720_strand=+_cove=72.45" - - "Rfam=AE003494.3/154083-154155_RF00005;tRNA;\|8e-33" - - - "Flybase=FBgn0011952:transfer_RNA:arg:12Ee:cytosolic_tRNA_gene\|4e-37"	2663	4,687,554 – 4,687,674	-	5	120	84.83	-1.46	0.84	0.520041
				2664	4,687,594 – 4,687,712	+	5	118	79.07	-1.15	0.90	0.644799
				2665	4,687,594 – 4,687,712	-	5	118	79.07	-1.92	0.94	0.969755
1619	3R_DroMel_CAF1	4,688,611 – 4,688,748	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000210;Name=Dmel_Arg_TCG_14000210;TFAMID=DmelRTCG-4688655" "tRNAscan=type:Arg:anticodon:TCG f:4688654_t:4688769_strand=+_cove=72.45" - - "Rfam=AE003494.3/154083-154155_RF00005;tRNA;\|6e-33" - - - "Flybase=FBgn0011952:transfer_RNA:arg:12Ee:cytosolic_tRNA_gene\|4e-37"	2666	4,688,611 – 4,688,731	-	6	120	87.01	-1.78	0.80	0.500000
				2667	4,688,651 – 4,688,748	+	4	113	85.88	-2.17	0.94	0.981853
				2668	4,688,651 – 4,688,748	-	4	113	85.88	-3.06	0.92	0.998034
1620	3R_DroMel_CAF1	4,690,229 – 4,690,319	- - - - - - - - -	2669	4,690,229 – 4,690,319	-	6	95	80.20	-1.61	0.61	0.565212
1621	3R_DroMel_CAF1	4,712,345 – 4,712,436	- - - - - - - - -	2670	4,712,345 – 4,712,436	-	5	107	78.38	-1.93	0.66	0.893239
1622	3R_DroMel_CAF1	4,712,562 – 4,712,662	- - - - - - - - -	2671	4,712,562 – 4,712,662	-	5	112	80.19	-1.57	0.80	0.742228
1623	3R_DroMel_CAF1	4,712,734 – 4,712,882	- - - - - - - - -	2672	4,712,734 – 4,712,846	+	6	119	75.92	-1.38	0.64	0.721204
1623	3R_DroMel_CAF1	4,712,734 – 4,712,882	- - - - - - - - -	2673	4,712,767 – 4,712,882	+	6	116	80.78	-1.23	0.70	0.543460
1624	3R_DroMel_CAF1	4,714,569 – 4,714,659	- - - - - - - - -	2674	4,714,569 – 4,714,659	-	4	98	81.61	-2.91	0.53	0.905999
1625	3R_DroMel_CAF1	4,715,995 – 4,716,116	- - - - - - - - -	2675	4,715,995 – 4,716,087	-	6	100	84.08	-1.72	0.91	0.858708
1625	3R_DroMel_CAF1	4,715,995 – 4,716,116	- - - - - - - - -	2676	4,716,017 – 4,716,116	-	6	103	80.63	-2.01	0.66	0.831125
1626	3R_DroMel_CAF1	4,719,516 – 4,719,650	- - - - - - - - -	2677	4,719,516 – 4,719,618	+	6	116	82.52	-2.11	0.62	0.594463
1626	3R_DroMel_CAF1	4,719,516 – 4,719,650	- - - - - - - - -	2678	4,719,554 – 4,719,650	+	6	117	83.39	-2.88	0.65	0.755080
1627	3R_DroMel_CAF1	4,723,502 – 4,723,598	- - - - - - - - -	2679	4,723,502 – 4,723,598	+	6	116	72.78	-2.08	0.43	0.891589
1628	3R_DroMel_CAF1	4,744,821 – 4,744,911	- - - - - - - - -	2680	4,744,821 – 4,744,911	+	6	91	90.92	-2.17	0.81	0.619401
1629	3R_DroMel_CAF1	4,753,631 – 4,753,742	- - - - - - - - -	2681	4,753,631 – 4,753,742	+	4	111	78.23	-2.35	0.66	0.982723
1630	3R_DroMel_CAF1	4,757,852 – 4,757,969	- - - - - - - - -	2682	4,757,852 – 4,757,969	-	5	117	81.42	-1.89	0.55	0.521437
1631	3R_DroMel_CAF1	4,761,975 – 4,762,066	- - - "knownCDS=Parent=FBtr0081954;Name=osk-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10901-RA" - - - - -	2683	4,761,975 – 4,762,066	+	6	94	88.70	-4.29	0.82	0.993733
1631	3R_DroMel_CAF1	4,761,975 – 4,762,066		2684	4,761,975 – 4,762,066	-	6	94	88.70	-1.87	0.84	0.708697
1632	3R_DroMel_CAF1	4,762,217 – 4,762,320	- - - "knownCDS=Parent=FBtr0081954;Name=osk-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10901-RA" - - - - -	2685	4,762,217 – 4,762,320	-	6	109	65.04	-1.80	0.34	0.653148
1633	3R_DroMel_CAF1	4,763,459 – 4,763,590	- - - - - - - - -	2686	4,763,459 – 4,763,561	+	6	102	83.92	-4.14	0.82	0.977722
				2687	4,763,459 – 4,763,561	-	6	102	83.92	-1.80	0.71	0.523249
				2688	4,763,483 – 4,763,590	+	6	110	86.79	-3.74	0.84	0.987220
1634	3R_DroMel_CAF1	4,763,612 – 4,763,825	- - "RNAmicro=f:4763717_t:4763829_strand:-_p:0.987810" - - - - - -	2689	4,763,612 – 4,763,717	+	6	108	82.48	-2.70	0.61	0.774696
				2690	4,763,717 – 4,763,825	+	6	113	79.11	-3.25	0.97	0.982637
				2691	4,763,717 – 4,763,825	-	6	113	79.11	-3.14	0.79	0.973572
1635	3R_DroMel_CAF1	4,767,278 – 4,767,398	- - - "knownCDS=Parent=FBtr0081957;Name=CG11963-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11963-RA" - - - - -	2692	4,767,278 – 4,767,398	+	6	120	84.17	-1.53	0.79	0.520992
1636	3R_DroMel_CAF1	4,769,170 – 4,769,282	- - - "knownCDS=Parent=FBtr0082015;Name=CG11964-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11964-RA" - - - - -	2693	4,769,170 – 4,769,282	+	6	120	75.53	-1.72	0.61	0.890311
1637	3R_DroMel_CAF1	4,771,551 – 4,771,682	- - - - - - - - -	2694	4,771,551 – 4,771,660	+	4	120	86.61	-1.79	0.70	0.701262
1637	3R_DroMel_CAF1	4,771,551 – 4,771,682	- - - - - - - - -	2695	4,771,588 – 4,771,682	-	6	120	74.00	-1.93	0.68	0.979910
1638	3R_DroMel_CAF1	4,772,252 – 4,772,349	- - - - - - - - -	2696	4,772,252 – 4,772,349	-	6	120	77.13	-2.32	0.43	0.791640
1639	3R_DroMel_CAF1	4,774,381 – 4,774,501	- - - - - - - - -	2697	4,774,381 – 4,774,501	+	5	120	80.42	-2.61	0.60	0.976485
1640	3R_DroMel_CAF1	4,774,541 – 4,774,646	- - - - - - - - -	2698	4,774,541 – 4,774,646	-	5	120	83.61	-1.71	0.71	0.625254
1641	3R_DroMel_CAF1	4,777,137 – 4,777,281	- - - - - - - - -	2699	4,777,137 – 4,777,243	-	5	120	78.34	-2.67	0.34	0.982294
				2700	4,777,173 – 4,777,281	+	5	120	77.12	-3.41	0.30	0.999345
				2701	4,777,173 – 4,777,281	-	5	120	77.12	-2.49	0.33	0.981567
1642	3R_DroMel_CAF1	4,777,350 – 4,777,531	- - - - - - - - -	2702	4,777,350 – 4,777,451	+	4	108	85.65	-1.64	0.80	0.705643
				2703	4,777,350 – 4,777,451	-	4	108	85.65	-1.69	0.79	0.737849
				2704	4,777,371 – 4,777,491	+	4	120	92.64	-2.41	0.95	0.991540
				2705	4,777,371 – 4,777,491	-	4	120	92.64	-2.26	0.94	0.984154
				2706	4,777,411 – 4,777,531	+	4	120	90.14	-1.40	0.88	0.609705
1643	3R_DroMel_CAF1	4,777,570 – 4,777,686	- - - - - - - - -	2707	4,777,570 – 4,777,686	-	4	120	74.62	-3.33	0.58	0.999858
1644	3R_DroMel_CAF1	4,777,801 – 4,777,961	- - - "knownCDS=Parent=FBtr0082014;Name=CG11966-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11966-RA" - - - - -	2708	4,777,801 – 4,777,921	+	5	120	98.17	-1.91	0.94	0.991224
				2709	4,777,801 – 4,777,921	-	5	120	98.17	-1.93	0.94	0.992748
				2710	4,777,841 – 4,777,961	+	5	120	96.08	-1.59	0.90	0.944324
				2711	4,777,841 – 4,777,961	-	5	120	96.08	-1.81	0.93	0.993967
1645	3R_DroMel_CAF1	4,778,318 – 4,778,477	- - - "knownCDS=Parent=FBtr0082014;Name=CG11966-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11966-RA" - - - - -	2712	4,778,318 – 4,778,438	+	6	120	93.28	-1.50	0.88	0.780319
				2713	4,778,318 – 4,778,438	-	6	120	93.28	-1.26	0.89	0.650922
				2714	4,778,358 – 4,778,477	+	6	120	93.46	-1.09	0.91	0.628268
1646	3R_DroMel_CAF1	4,781,141 – 4,781,243	- - - - - - - - -	2715	4,781,141 – 4,781,243	-	5	114	86.14	-2.03	0.70	0.736517
1647	3R_DroMel_CAF1	4,781,371 – 4,781,565	- - - - - - - - -	2716	4,781,371 – 4,781,485	+	4	118	85.90	-1.91	0.69	0.756349
				2717	4,781,371 – 4,781,485	-	4	118	85.90	-1.37	0.76	0.500000
				2718	4,781,449 – 4,781,565	+	4	118	92.51	-1.61	0.86	0.709349
1648	3R_DroMel_CAF1	4,782,096 – 4,782,270	- - - - - - - - -	2719	4,782,096 – 4,782,215	-	6	120	96.09	-2.29	0.83	0.826709
1648	3R_DroMel_CAF1	4,782,096 – 4,782,270	- - - - - - - - -	2720	4,782,175 – 4,782,270	+	6	120	77.47	-1.79	0.60	0.838067
1649	3R_DroMel_CAF1	4,782,457 – 4,782,574	- - - - - - - - -	2721	4,782,457 – 4,782,574	-	5	120	94.25	-1.21	0.89	0.658921
1650	3R_DroMel_CAF1	4,782,895 – 4,783,015	- - - - - - - - -	2722	4,782,895 – 4,783,015	-	6	120	95.28	-3.46	0.92	0.999929
1651	3R_DroMel_CAF1	4,783,035 – 4,783,133	- - - - - - - - -	2723	4,783,035 – 4,783,133	-	6	120	92.22	-1.30	0.95	0.921704
1652	3R_DroMel_CAF1	4,783,173 – 4,783,263	- - - - - - - - -	2724	4,783,173 – 4,783,263	+	3	90	97.04	-3.42	1.00	0.994355
1653	3R_DroMel_CAF1	4,784,517 – 4,784,672	- - - - - - - - -	2725	4,784,517 – 4,784,632	-	5	115	85.48	-2.36	0.64	0.762040
1653	3R_DroMel_CAF1	4,784,517 – 4,784,672	- - - - - - - - -	2726	4,784,552 – 4,784,672	-	5	120	86.58	-1.81	0.77	0.759462
1654	3R_DroMel_CAF1	4,784,825 – 4,785,077	- - - - - - - - -	2727	4,784,825 – 4,784,937	-	3	112	79.38	-1.33	0.76	0.526182
				2728	4,784,937 – 4,785,037	-	5	104	93.27	-2.09	0.91	0.998324
				2729	4,784,973 – 4,785,077	+	6	120	86.77	-2.46	0.75	0.559339
				2730	4,784,973 – 4,785,077	-	6	120	86.77	-3.72	0.82	0.980481
1655	3R_DroMel_CAF1	4,786,399 – 4,786,630	- - - - - - - - -	2731	4,786,399 – 4,786,515	-	3	119	77.05	-1.14	0.85	0.846688
				2732	4,786,515 – 4,786,630	+	6	120	94.83	-1.25	0.95	0.943597
				2733	4,786,515 – 4,786,630	-	6	120	94.83	-2.57	0.91	0.999140
1656	3R_DroMel_CAF1	4,787,224 – 4,787,334	- - "RNAmicro=f:4787224_t:4787333_strand:+_p:0.575060" - - - - - -	2734	4,787,224 – 4,787,334	-	5	110	89.31	-1.74	0.78	0.773596
1657	3R_DroMel_CAF1	4,787,498 – 4,787,615	- - - - - - - - -	2735	4,787,498 – 4,787,615	+	6	120	96.16	-0.99	0.95	0.808175
1658	3R_DroMel_CAF1	4,788,101 – 4,788,214	- - - - - - - - -	2736	4,788,101 – 4,788,214	+	5	113	95.45	-1.55	0.85	0.840868
1658	3R_DroMel_CAF1	4,788,101 – 4,788,214	- - - - - - - - -	2737	4,788,101 – 4,788,214	-	5	113	95.45	-1.90	0.87	0.981901
1659	3R_DroMel_CAF1	4,789,292 – 4,789,398	- - - - - - - - -	2738	4,789,292 – 4,789,398	-	6	120	83.96	-2.42	0.69	0.643386
1660	3R_DroMel_CAF1	4,791,087 – 4,791,207	- - - - - - - - -	2739	4,791,087 – 4,791,207	+	6	120	94.11	-1.19	0.92	0.777190
1661	3R_DroMel_CAF1	4,791,287 – 4,791,382	- - - - - - - - -	2740	4,791,287 – 4,791,382	+	6	120	79.67	-2.36	0.61	0.916651
1662	3R_DroMel_CAF1	4,791,414 – 4,791,547	- - - - - - - - -	2741	4,791,414 – 4,791,522	+	6	120	89.82	-1.40	0.88	0.631745
1662	3R_DroMel_CAF1	4,791,414 – 4,791,547	- - - - - - - - -	2742	4,791,442 – 4,791,547	+	5	105	97.90	-2.39	0.98	0.999669
1663	3R_DroMel_CAF1	4,792,823 – 4,792,989	- - - - - - - - -	2743	4,792,823 – 4,792,925	+	3	102	98.69	-3.22	1.00	0.992083
				2744	4,792,823 – 4,792,925	-	3	102	98.69	-3.23	0.99	0.991290
				2745	4,792,859 – 4,792,949	+	5	90	97.78	-1.89	0.99	0.997108
				2746	4,792,859 – 4,792,949	-	5	90	97.78	-2.19	0.96	0.999032
				2747	4,792,899 – 4,792,989	-	5	90	97.78	-1.20	1.01	0.778417
1664	3R_DroMel_CAF1	4,794,214 – 4,794,313	- - - - - - - - -	2748	4,794,214 – 4,794,313	+	5	100	89.54	-2.74	0.76	0.978649
1665	3R_DroMel_CAF1	4,794,542 – 4,794,662	- - - - - - - - -	2749	4,794,542 – 4,794,662	+	6	120	90.89	-3.21	0.86	0.994136
1665	3R_DroMel_CAF1	4,794,542 – 4,794,662	- - - - - - - - -	2750	4,794,542 – 4,794,662	-	6	120	90.89	-2.60	0.91	0.997691
1666	3R_DroMel_CAF1	4,795,238 – 4,795,331	- - - - - - - - -	2751	4,795,238 – 4,795,331	+	6	120	86.34	-1.80	0.81	0.573248
1667	3R_DroMel_CAF1	4,795,744 – 4,795,845	- - - - - - - - -	2752	4,795,744 – 4,795,845	+	5	107	91.10	-1.91	0.73	0.639949
1668	3R_DroMel_CAF1	4,796,165 – 4,796,281	- - - - - - - - -	2753	4,796,165 – 4,796,281	-	5	117	82.46	-1.76	0.71	0.692725
1669	3R_DroMel_CAF1	4,796,551 – 4,796,743	- - - - - - - - -	2754	4,796,551 – 4,796,663	+	5	115	96.67	-3.22	0.92	0.999909
				2755	4,796,551 – 4,796,663	-	5	115	96.67	-3.14	1.00	0.999986
				2756	4,796,623 – 4,796,743	+	6	120	94.44	-1.72	0.89	0.937775
1670	3R_DroMel_CAF1	4,797,164 – 4,797,267	- - - - - - - - -	2757	4,797,164 – 4,797,267	-	6	120	82.63	-2.00	0.76	0.781058
1671	3R_DroMel_CAF1	4,799,953 – 4,800,067	- - - - - - - - -	2758	4,799,953 – 4,800,067	+	6	120	85.79	-3.01	0.70	0.624289
1671	3R_DroMel_CAF1	4,799,953 – 4,800,067	- - - - - - - - -	2759	4,799,953 – 4,800,067	-	6	120	85.79	-3.72	0.71	0.848300
1672	3R_DroMel_CAF1	4,800,091 – 4,800,192	- - - - - - - - -	2760	4,800,091 – 4,800,192	-	5	101	97.03	-1.40	0.95	0.912571
1673	3R_DroMel_CAF1	4,803,203 – 4,803,323	- - - - - - - - -	2761	4,803,203 – 4,803,323	+	6	120	93.65	-2.15	0.98	0.999771
1673	3R_DroMel_CAF1	4,803,203 – 4,803,323	- - - - - - - - -	2762	4,803,203 – 4,803,323	-	6	120	93.65	-1.10	0.98	0.934467
1674	3R_DroMel_CAF1	4,803,618 – 4,803,732	- - - - - - - - -	2763	4,803,618 – 4,803,732	-	5	119	89.47	-2.01	0.85	0.975275
1675	3R_DroMel_CAF1	4,804,291 – 4,804,394	- - - - - - - - -	2764	4,804,291 – 4,804,394	+	5	108	86.11	-2.41	0.73	0.933942
1676	3R_DroMel_CAF1	4,805,896 – 4,806,050	- - - - - - - - -	2765	4,805,896 – 4,806,010	+	5	119	75.72	-1.63	0.74	0.929217
				2766	4,805,935 – 4,806,050	+	5	119	85.07	-2.55	0.96	0.998551
				2767	4,805,935 – 4,806,050	-	5	119	85.07	-1.57	0.82	0.632402
1677	3R_DroMel_CAF1	4,806,205 – 4,806,325	- - - - - - - - -	2768	4,806,205 – 4,806,325	-	5	120	83.83	-1.67	0.70	0.579767
1678	3R_DroMel_CAF1	4,806,417 – 4,806,564	- - - - - - - - -	2769	4,806,417 – 4,806,536	-	6	120	78.63	-2.60	0.56	0.956494
1678	3R_DroMel_CAF1	4,806,417 – 4,806,564	- - - - - - - - -	2770	4,806,457 – 4,806,564	-	6	120	79.13	-2.14	0.53	0.758774
1679	3R_DroMel_CAF1	4,807,577 – 4,807,669	- - - "knownCDS=Parent=FBtr0081958;Name=CG11967-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11967-RA" - - - - -	2771	4,807,577 – 4,807,669	-	6	104	77.86	-2.22	0.56	0.917364
1680	3R_DroMel_CAF1	4,815,265 – 4,815,446	- - - "knownCDS=Parent=FBtr0081959;Name=CG11970-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11970-RA" - - - - -	2772	4,815,265 – 4,815,373	+	6	108	82.47	-2.33	0.82	0.909392
				2773	4,815,265 – 4,815,373	-	6	108	82.47	-1.90	0.62	0.536928
				2774	4,815,293 – 4,815,407	+	6	114	71.40	-1.99	0.52	0.953130
				2775	4,815,333 – 4,815,446	-	6	114	80.37	-2.50	0.73	0.938570
1681	3R_DroMel_CAF1	4,815,782 – 4,815,879	- - - "knownCDS=Parent=FBtr0081959;Name=CG11970-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11970-RA" - - - - -	2776	4,815,782 – 4,815,879	+	5	100	91.12	-2.14	0.91	0.998318
1682	3R_DroMel_CAF1	4,825,005 – 4,825,116	- - - - - - - - -	2777	4,825,005 – 4,825,116	+	4	115	82.52	-2.00	0.83	0.922298
1682	3R_DroMel_CAF1	4,825,005 – 4,825,116	- - - - - - - - -	2778	4,825,005 – 4,825,116	-	4	115	82.52	-2.14	0.71	0.915779
1683	3R_DroMel_CAF1	4,826,533 – 4,826,642	- - - - - - - - -	2779	4,826,533 – 4,826,642	-	5	109	88.98	-2.40	0.80	0.982539
1684	3R_DroMel_CAF1	4,827,016 – 4,827,123	- - - - - - - - -	2780	4,827,016 – 4,827,123	+	5	115	80.27	-1.79	0.76	0.846415
1684	3R_DroMel_CAF1	4,827,016 – 4,827,123	- - - - - - - - -	2781	4,827,016 – 4,827,123	-	5	115	80.27	-1.57	0.75	0.683607
1685	3R_DroMel_CAF1	4,832,566 – 4,832,662	- - - "knownCDS=Parent=FBtr0081965;Name=CG11982-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11982-RA" - - - - -	2782	4,832,566 – 4,832,662	+	6	96	83.54	-2.03	0.75	0.699996
1686	3R_DroMel_CAF1	4,834,386 – 4,834,484	- - - - - - - - -	2783	4,834,386 – 4,834,484	+	6	105	76.48	-1.45	0.61	0.664927
1687	3R_DroMel_CAF1	4,836,532 – 4,836,638	- - - "knownCDS=Parent=FBtr0082008;Name=CG11984-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11984-RC" - - - - -	2784	4,836,532 – 4,836,638	+	6	112	80.40	-1.64	0.60	0.532776
1688	3R_DroMel_CAF1	4,837,754 – 4,837,846	- - - "knownCDS=Parent=FBtr0082007, FBtr0082009;Name=CG11984-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11984-RA, FlyBase+Annotation+IDs:CG11984-RB" - - - - -	2785	4,837,754 – 4,837,846	+	6	94	79.81	-1.27	0.73	0.669032
1689	3R_DroMel_CAF1	4,845,760 – 4,845,850	- - - - - - - - -	2786	4,845,760 – 4,845,850	+	5	90	90.78	-1.66	0.81	0.838702
1690	3R_DroMel_CAF1	4,857,952 – 4,858,051	- - - - - - - - -	2787	4,857,952 – 4,858,051	-	5	101	88.45	-1.79	0.79	0.821825
1691	3R_DroMel_CAF1	4,858,343 – 4,858,435	- - - - - - - - -	2788	4,858,343 – 4,858,435	-	6	104	81.40	-2.86	0.50	0.791411
1692	3R_DroMel_CAF1	4,860,669 – 4,860,762	- - - - - - - - -	2789	4,860,669 – 4,860,762	+	6	117	80.40	-2.55	0.67	0.931951
1693	3R_DroMel_CAF1	4,862,672 – 4,862,767	- - - - - - - - -	2790	4,862,672 – 4,862,767	+	6	95	91.93	-2.24	0.92	0.996780
1693	3R_DroMel_CAF1	4,862,672 – 4,862,767	- - - - - - - - -	2791	4,862,672 – 4,862,767	-	6	95	91.93	-1.45	0.93	0.928885
1694	3R_DroMel_CAF1	4,862,822 – 4,862,917	- - - - - - - - -	2792	4,862,822 – 4,862,917	+	5	95	92.95	-1.71	0.79	0.735179
1695	3R_DroMel_CAF1	4,865,110 – 4,865,213	- - - - - - - - -	2793	4,865,110 – 4,865,213	+	5	104	94.20	-2.07	0.84	0.982645
1696	3R_DroMel_CAF1	4,865,882 – 4,865,977	- - - "knownCDS=Parent=FBtr0081968;Name=CG11990-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11990-RA" - - - - -	2794	4,865,882 – 4,865,977	+	6	106	81.72	-2.13	0.71	0.828446
1696	3R_DroMel_CAF1	4,865,882 – 4,865,977		2795	4,865,882 – 4,865,977	-	6	106	81.72	-1.32	0.72	0.549443
1697	3R_DroMel_CAF1	4,871,353 – 4,871,446	- - - "knownCDS=Parent=FBtr0089339, FBtr0089340, FBtr0089341;Name=Rel-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11992-RB, FlyBase+Annotation+IDs:CG11992-RC, FlyBase+Annotation+IDs:CG11992-RD" - - - - -	2796	4,871,353 – 4,871,446	+	6	93	83.01	-1.86	0.69	0.605977
1698	3R_DroMel_CAF1	4,872,078 – 4,872,250	- - - - - - - - -	2797	4,872,078 – 4,872,179	-	5	115	79.55	-2.31	0.36	0.823402
1698	3R_DroMel_CAF1	4,872,078 – 4,872,250	- - - - - - - - -	2798	4,872,144 – 4,872,250	-	4	106	86.95	-1.76	0.74	0.736451
1699	3R_DroMel_CAF1	4,872,819 – 4,872,915	- - - "knownCDS=Parent=FBtr0089340;Name=Rel-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11992-RC" - - - - -	2799	4,872,819 – 4,872,915	+	6	102	78.11	-1.58	0.59	0.611578
1700	3R_DroMel_CAF1	4,876,872 – 4,876,967	- - - - - - - - -	2800	4,876,872 – 4,876,967	-	6	103	78.62	-1.22	0.70	0.656056
1701	3R_DroMel_CAF1	4,880,062 – 4,880,159	- - - - - - - - -	2801	4,880,062 – 4,880,159	+	3	97	76.34	-1.49	0.74	0.844562
1701	3R_DroMel_CAF1	4,880,062 – 4,880,159	- - - - - - - - -	2802	4,880,062 – 4,880,159	-	3	97	76.34	-2.85	0.69	0.999630
1702	3R_DroMel_CAF1	4,885,479 – 4,885,578	- - - "knownCDS=Parent=FBtr0081970;Name=CG11033-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11033-RA" - - - - -	2803	4,885,479 – 4,885,578	-	6	108	74.90	-0.91	0.72	0.629110
1703	3R_DroMel_CAF1	4,894,349 – 4,894,450	- - - - - - - - -	2804	4,894,349 – 4,894,450	+	4	101	96.04	-1.55	0.90	0.553264
1704	3R_DroMel_CAF1	4,895,553 – 4,895,645	- - - - - - - - -	2805	4,895,553 – 4,895,645	+	6	118	77.28	-2.71	0.46	0.963967
1704	3R_DroMel_CAF1	4,895,553 – 4,895,645	- - - - - - - - -	2806	4,895,553 – 4,895,645	-	6	118	77.28	-4.00	0.50	0.997308
1705	3R_DroMel_CAF1	4,896,639 – 4,896,774	- - - "knownCDS=Parent=FBtr0081994;Name=pum-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9755-RE" - - - - -	2807	4,896,639 – 4,896,734	+	6	104	82.47	-1.85	0.80	0.787740
				2808	4,896,639 – 4,896,734	-	6	104	82.47	-2.93	0.72	0.900696
				2809	4,896,657 – 4,896,774	-	6	117	74.03	-2.28	0.48	0.966492
1706	3R_DroMel_CAF1	4,898,254 – 4,898,402	- - - "knownCDS=Parent=FBtr0081990, FBtr0081991, FBtr0081992, FBtr0081993;Name=pum-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9755-RA, FlyBase+Annotation+IDs:CG9755-RD, FlyBase+Annotation+IDs:CG9755-RC, FlyBase+Annotation+IDs:CG9755-RB" - - - - -	2810	4,898,254 – 4,898,371	-	6	117	77.95	-1.95	0.52	0.698586
1706	3R_DroMel_CAF1	4,898,254 – 4,898,402		2811	4,898,294 – 4,898,402	-	5	108	70.47	-1.87	0.46	0.852728
1707	3R_DroMel_CAF1	4,898,521 – 4,898,666	- - - "knownCDS=Parent=FBtr0081990, FBtr0081991, FBtr0081992, FBtr0081993;Name=pum-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9755-RA, FlyBase+Annotation+IDs:CG9755-RD, FlyBase+Annotation+IDs:CG9755-RC, FlyBase+Annotation+IDs:CG9755-RB" - - - - -	2812	4,898,521 – 4,898,635	+	6	114	72.52	-1.98	0.43	0.828770
				2813	4,898,521 – 4,898,635	-	6	114	72.52	-1.72	0.44	0.514602
				2814	4,898,561 – 4,898,666	+	6	114	73.58	-2.24	0.45	0.948257
				2815	4,898,561 – 4,898,666	-	6	114	73.58	-2.74	0.42	0.991922
1708	3R_DroMel_CAF1	4,904,807 – 4,904,913	- - - - - - - - -	2816	4,904,807 – 4,904,913	+	6	117	76.35	-2.26	0.37	0.629809
1708	3R_DroMel_CAF1	4,904,807 – 4,904,913	- - - - - - - - -	2817	4,904,807 – 4,904,913	-	6	117	76.35	-2.44	0.37	0.789352
1709	3R_DroMel_CAF1	4,909,095 – 4,909,190	- - - - - - - - -	2818	4,909,095 – 4,909,190	-	6	114	78.45	-1.22	0.73	0.725009
1710	3R_DroMel_CAF1	4,911,303 – 4,911,393	- - - - - - - - -	2819	4,911,303 – 4,911,393	+	3	90	99.26	-1.71	0.99	0.767459
1710	3R_DroMel_CAF1	4,911,303 – 4,911,393	- - - - - - - - -	2820	4,911,303 – 4,911,393	-	3	90	99.26	-1.98	0.88	0.574288
1711	3R_DroMel_CAF1	4,914,960 – 4,915,069	- - - - - - - - -	2821	4,914,960 – 4,915,069	-	5	109	90.31	-1.43	0.84	0.724126
1712	3R_DroMel_CAF1	4,915,196 – 4,915,301	- - - - - - - - -	2822	4,915,196 – 4,915,301	-	5	111	96.05	-1.45	0.98	0.971686
1713	3R_DroMel_CAF1	4,915,636 – 4,915,733	- - - - - - - - -	2823	4,915,636 – 4,915,733	+	6	100	78.36	-1.41	0.64	0.630879
1714	3R_DroMel_CAF1	4,919,054 – 4,919,164	- - - - - - - - -	2824	4,919,054 – 4,919,164	-	6	120	81.91	-1.75	0.63	0.576069
1715	3R_DroMel_CAF1	4,922,062 – 4,922,159	- - - - - - - - -	2825	4,922,062 – 4,922,159	+	6	108	75.26	-1.77	0.52	0.711707
1716	3R_DroMel_CAF1	4,932,330 – 4,932,423	- - - - - - - - -	2826	4,932,330 – 4,932,423	-	5	104	91.43	-1.45	1.00	0.974218
1717	3R_DroMel_CAF1	4,935,734 – 4,935,827	- - - - - - - - -	2827	4,935,734 – 4,935,827	-	6	114	76.96	-1.41	0.62	0.632033
1718	3R_DroMel_CAF1	4,936,585 – 4,936,723	- - - - - - - - -	2828	4,936,585 – 4,936,697	+	5	112	88.21	-2.03	0.71	0.704377
1718	3R_DroMel_CAF1	4,936,585 – 4,936,723	- - - - - - - - -	2829	4,936,619 – 4,936,723	+	5	118	76.12	-1.57	0.62	0.594059
1719	3R_DroMel_CAF1	4,939,155 – 4,939,253	- - - - - - - - -	2830	4,939,155 – 4,939,253	-	5	102	78.71	-2.23	0.92	0.988133
1720	3R_DroMel_CAF1	4,942,011 – 4,942,103	- - - - - - - - -	2831	4,942,011 – 4,942,103	-	5	94	74.10	-2.01	0.29	0.915241
1721	3R_DroMel_CAF1	4,942,802 – 4,942,900	- - - - - - - - -	2832	4,942,802 – 4,942,900	-	5	98	88.78	-1.92	0.77	0.843077
1722	3R_DroMel_CAF1	4,943,794 – 4,943,889	- - - - - - - - -	2833	4,943,794 – 4,943,889	+	5	95	81.89	-2.59	0.65	0.964402
1723	3R_DroMel_CAF1	4,946,253 – 4,946,348	- - - - - - - - -	2834	4,946,253 – 4,946,348	+	4	107	75.70	-2.08	0.49	0.559374
1724	3R_DroMel_CAF1	4,946,535 – 4,946,626	- - - - - - - - -	2835	4,946,535 – 4,946,626	+	6	102	82.72	-2.83	0.57	0.711335
1725	3R_DroMel_CAF1	4,951,482 – 4,951,606	- - - - - - - - -	2836	4,951,482 – 4,951,582	+	6	110	81.82	-1.36	0.69	0.520679
1725	3R_DroMel_CAF1	4,951,482 – 4,951,606	- - - - - - - - -	2837	4,951,513 – 4,951,606	-	6	100	79.63	-1.42	0.76	0.784799
1726	3R_DroMel_CAF1	4,966,917 – 4,967,012	- - - - - - - - -	2838	4,966,917 – 4,967,012	+	5	101	74.95	-2.50	0.50	0.994154
1726	3R_DroMel_CAF1	4,966,917 – 4,967,012	- - - - - - - - -	2839	4,966,917 – 4,967,012	-	5	101	74.95	-2.41	0.50	0.990040
1727	3R_DroMel_CAF1	4,968,610 – 4,968,710	- - - - - - - - -	2840	4,968,610 – 4,968,710	+	6	105	79.29	-1.29	0.69	0.645351
1728	3R_DroMel_CAF1	4,970,632 – 4,970,740	- - - - - - - - -	2841	4,970,632 – 4,970,740	-	5	115	71.32	-1.71	0.39	0.555595
1729	3R_DroMel_CAF1	4,971,776 – 4,971,883	- - - - - - - - -	2842	4,971,776 – 4,971,883	+	6	118	70.24	-1.44	0.51	0.500000
1730	3R_DroMel_CAF1	4,972,489 – 4,972,693	- - - - - - - - -	2843	4,972,489 – 4,972,586	-	6	97	89.90	-2.25	0.79	0.562449
				2844	4,972,515 – 4,972,618	-	6	120	77.67	-1.46	0.60	0.582843
				2845	4,972,546 – 4,972,656	-	5	110	98.00	-1.27	0.94	0.682713
				2846	4,972,586 – 4,972,693	-	5	107	99.07	-1.73	0.97	0.974850
1731	3R_DroMel_CAF1	4,978,114 – 4,978,209	- - - - - - - - -	2847	4,978,114 – 4,978,209	+	5	120	70.94	-1.77	0.16	0.722194
1732	3R_DroMel_CAF1	4,978,602 – 4,978,696	- - - - - - - - -	2848	4,978,602 – 4,978,696	+	6	105	80.01	-2.41	0.49	0.723532
1733	3R_DroMel_CAF1	4,981,897 – 4,981,988	- - - - - - - - -	2849	4,981,897 – 4,981,988	+	6	97	81.82	-2.70	0.81	0.941130
1733	3R_DroMel_CAF1	4,981,897 – 4,981,988	- - - - - - - - -	2850	4,981,897 – 4,981,988	-	6	97	81.82	-1.71	0.80	0.781412
1734	3R_DroMel_CAF1	4,982,853 – 4,983,031	- - - "knownCDS=Parent=FBtr0081994;Name=pum-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9755-RE" - - - - -	2851	4,982,853 – 4,982,970	-	6	120	85.92	-1.98	0.85	0.802789
				2852	4,982,890 – 4,983,004	-	6	120	81.60	-2.17	0.87	0.930803
				2853	4,982,930 – 4,983,031	-	6	107	75.02	-1.81	0.69	0.966272
1735	3R_DroMel_CAF1	4,993,407 – 4,993,504	- - - - - - - - -	2854	4,993,407 – 4,993,504	+	5	105	82.53	-1.61	0.67	0.508589
1736	3R_DroMel_CAF1	4,993,656 – 4,993,749	- - - - - - - - -	2855	4,993,656 – 4,993,749	+	6	104	82.70	-1.79	0.66	0.563238
1737	3R_DroMel_CAF1	4,996,357 – 4,996,490	- - - - - - - - -	2856	4,996,357 – 4,996,467	+	6	120	83.92	-2.52	0.73	0.760464
				2857	4,996,357 – 4,996,467	-	6	120	83.92	-1.91	0.70	0.546643
				2858	4,996,391 – 4,996,490	-	6	120	85.35	-2.08	0.81	0.727956
1738	3R_DroMel_CAF1	5,008,073 – 5,008,171	- - - - - - - - -	2859	5,008,073 – 5,008,171	+	6	116	80.56	-2.56	0.55	0.851946
1738	3R_DroMel_CAF1	5,008,073 – 5,008,171	- - - - - - - - -	2860	5,008,073 – 5,008,171	-	6	116	80.56	-2.60	0.56	0.875749
1739	3R_DroMel_CAF1	5,010,750 – 5,010,866	- - - - - - - - -	2861	5,010,750 – 5,010,866	+	5	120	73.35	-1.52	0.10	0.679641
1740	3R_DroMel_CAF1	5,022,574 – 5,022,669	- - - - - - - - -	2862	5,022,574 – 5,022,669	+	6	101	82.68	-1.99	0.61	0.517451
1740	3R_DroMel_CAF1	5,022,574 – 5,022,669	- - - - - - - - -	2863	5,022,574 – 5,022,669	-	6	101	82.68	-2.89	0.74	0.899454
1741	3R_DroMel_CAF1	5,025,780 – 5,025,882	- - - - - - - - -	2864	5,025,780 – 5,025,882	+	6	111	76.93	-2.66	0.44	0.956602
1742	3R_DroMel_CAF1	5,026,682 – 5,026,772	- - - - - - - - -	2865	5,026,682 – 5,026,772	+	6	113	78.91	-1.90	0.55	0.671466
1743	3R_DroMel_CAF1	5,028,177 – 5,028,273	- - - - - - - - -	2866	5,028,177 – 5,028,273	+	6	101	78.08	-1.34	0.62	0.536203
1744	3R_DroMel_CAF1	5,042,050 – 5,042,140	- - - - - - - - -	2867	5,042,050 – 5,042,140	-	5	115	69.79	-1.77	0.59	0.930205
1745	3R_DroMel_CAF1	5,043,111 – 5,043,224	- - - - - - - - -	2868	5,043,111 – 5,043,224	+	4	120	85.15	-1.51	0.67	0.524849
1746	3R_DroMel_CAF1	5,045,291 – 5,045,388	- - - - - - - - -	2869	5,045,291 – 5,045,388	-	5	98	95.04	-1.52	0.81	0.584034
1747	3R_DroMel_CAF1	5,048,127 – 5,048,275	- - - - - - - - -	2870	5,048,127 – 5,048,239	+	5	116	91.81	-2.10	0.93	0.999043
				2871	5,048,127 – 5,048,239	-	5	116	91.81	-2.77	0.79	0.987951
				2872	5,048,166 – 5,048,275	-	5	115	91.29	-2.01	0.71	0.518796
1748	3R_DroMel_CAF1	5,048,344 – 5,048,445	- - - - - - - - -	2873	5,048,344 – 5,048,445	+	5	101	97.82	-1.44	0.98	0.939441
1749	3R_DroMel_CAF1	5,051,048 – 5,051,154	- - - - - - - - -	2874	5,051,048 – 5,051,154	-	3	106	78.52	-1.66	0.76	0.854899
1750	3R_DroMel_CAF1	5,052,719 – 5,052,816	- - - - - - - - -	2875	5,052,719 – 5,052,816	-	5	109	86.28	-2.38	0.79	0.970358
1751	3R_DroMel_CAF1	5,053,303 – 5,053,397	- - - - - - - - -	2876	5,053,303 – 5,053,397	+	5	94	95.41	-1.70	0.99	0.997033
1751	3R_DroMel_CAF1	5,053,303 – 5,053,397	- - - - - - - - -	2877	5,053,303 – 5,053,397	-	5	94	95.41	-1.10	0.97	0.697250
1752	3R_DroMel_CAF1	5,055,751 – 5,055,851	- - - - - - - - -	2878	5,055,751 – 5,055,851	+	5	103	83.79	-2.64	0.55	0.786223
1752	3R_DroMel_CAF1	5,055,751 – 5,055,851	- - - - - - - - -	2879	5,055,751 – 5,055,851	-	5	103	83.79	-2.29	0.62	0.779617
1753	3R_DroMel_CAF1	5,058,451 – 5,058,549	- - - "knownCDS=Parent=FBtr0081990, FBtr0081991, FBtr0081992;Name=pum-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9755-RA, FlyBase+Annotation+IDs:CG9755-RD, FlyBase+Annotation+IDs:CG9755-RC" - - - - -	2880	5,058,451 – 5,058,549	+	6	120	74.34	-1.68	0.52	0.641055
1754	3R_DroMel_CAF1	5,058,837 – 5,058,929	- - - - - - - - -	2881	5,058,837 – 5,058,929	-	5	94	94.18	-2.21	0.82	0.980697
1755	3R_DroMel_CAF1	5,059,324 – 5,059,432	- - - "knownCDS=Parent=FBtr0081990, FBtr0081991, FBtr0081992;Name=pum-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9755-RA, FlyBase+Annotation+IDs:CG9755-RD, FlyBase+Annotation+IDs:CG9755-RC" - - - - -	2882	5,059,324 – 5,059,432	+	6	114	76.31	-1.68	0.56	0.707585
1755	3R_DroMel_CAF1	5,059,324 – 5,059,432		2883	5,059,324 – 5,059,432	-	6	114	76.31	-1.56	0.55	0.508176
1756	3R_DroMel_CAF1	5,062,570 – 5,062,679	- - - - - - - - -	2884	5,062,570 – 5,062,679	-	5	113	96.81	-1.14	1.00	0.750812
1757	3R_DroMel_CAF1	5,067,175 – 5,067,295	- - - "knownCDS=Parent=FBtr0081986;Name=CG9746-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9746-RA" - - - - -	2885	5,067,175 – 5,067,295	-	6	120	81.56	-1.43	0.68	0.559954
1758	3R_DroMel_CAF1	5,070,846 – 5,070,954	- - - "knownCDS=Parent=FBtr0081986;Name=CG9746-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9746-RA" - - - - -	2886	5,070,846 – 5,070,954	+	6	109	80.21	-1.76	0.63	0.731176
1759	3R_DroMel_CAF1	5,073,413 – 5,073,554	- - - "knownCDS=Parent=FBtr0081973;Name=CG8420-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8420-RA" - - - - -	2887	5,073,413 – 5,073,527	+	6	114	75.65	-2.37	0.63	0.987011
				2888	5,073,413 – 5,073,527	-	6	114	75.65	-2.58	0.53	0.987190
				2889	5,073,453 – 5,073,554	+	6	108	80.22	-2.29	0.61	0.874001
				2890	5,073,453 – 5,073,554	-	6	108	80.22	-1.88	0.68	0.838680
1760	3R_DroMel_CAF1	5,074,560 – 5,074,701	- - - "knownCDS=Parent=FBtr0081973;Name=CG8420-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8420-RA" - - - - -	2891	5,074,560 – 5,074,680	+	6	120	83.67	-1.47	0.82	0.558882
1760	3R_DroMel_CAF1	5,074,560 – 5,074,701		2892	5,074,600 – 5,074,701	+	6	101	83.17	-1.37	0.77	0.500000
1761	3R_DroMel_CAF1	5,078,936 – 5,079,054	- - - - - - - - -	2893	5,078,936 – 5,079,054	-	4	119	72.27	-1.62	0.58	0.666707
1762	3R_DroMel_CAF1	5,081,688 – 5,081,786	- - - - - - - - -	2894	5,081,688 – 5,081,786	+	6	103	75.92	-1.67	0.51	0.516241
1763	3R_DroMel_CAF1	5,082,898 – 5,082,995	- - - - - - - - -	2895	5,082,898 – 5,082,995	+	3	97	95.88	-3.86	1.00	0.994773
1763	3R_DroMel_CAF1	5,082,898 – 5,082,995	- - - - - - - - -	2896	5,082,898 – 5,082,995	-	3	97	95.88	-1.29	1.01	0.539484
1764	3R_DroMel_CAF1	5,085,735 – 5,085,846	- - - "knownCDS=Parent=FBtr0081977;Name=CG8436-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8436-RA" - - - - -	2897	5,085,735 – 5,085,846	-	6	111	84.32	-2.25	0.76	0.715957
1765	3R_DroMel_CAF1	5,087,736 – 5,087,856	- - - "knownCDS=Parent=FBtr0081978;Name=CG8444-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8444-RA" - - - - -	2898	5,087,736 – 5,087,856	+	6	120	82.94	-1.64	0.69	0.535466
1766	3R_DroMel_CAF1	5,095,634 – 5,095,725	- - - - - - - - -	2899	5,095,634 – 5,095,725	-	6	104	74.63	-1.94	0.40	0.500000
1767	3R_DroMel_CAF1	5,096,524 – 5,096,637	- - - - - - - - -	2900	5,096,524 – 5,096,637	+	5	120	82.11	-2.43	0.79	0.979863
1768	3R_DroMel_CAF1	5,096,813 – 5,096,972	- - - - - - - - -	2901	5,096,813 – 5,096,932	-	5	120	85.41	-2.23	0.67	0.779086
				2902	5,096,853 – 5,096,972	+	5	120	91.74	-1.75	0.84	0.941392
				2903	5,096,853 – 5,096,972	-	5	120	91.74	-2.27	0.75	0.884872
1769	3R_DroMel_CAF1	5,097,613 – 5,097,714	- - - - - - - - -	2904	5,097,613 – 5,097,714	-	4	107	76.89	-2.12	0.70	0.977498
1770	3R_DroMel_CAF1	5,098,567 – 5,098,661	- - - - - - - - -	2905	5,098,567 – 5,098,661	+	5	120	74.57	-1.98	0.36	0.860868
1771	3R_DroMel_CAF1	5,098,712 – 5,098,860	- - - - - - - - -	2906	5,098,712 – 5,098,827	-	5	120	87.26	-2.10	0.68	0.665404
1771	3R_DroMel_CAF1	5,098,712 – 5,098,860	- - - - - - - - -	2907	5,098,747 – 5,098,860	+	5	120	91.19	-1.31	0.83	0.538275
1772	3R_DroMel_CAF1	5,101,185 – 5,101,338	- - - - - - - - -	2908	5,101,185 – 5,101,298	+	5	120	89.11	-2.49	0.79	0.981099
				2909	5,101,225 – 5,101,338	+	5	120	80.04	-2.24	0.66	0.945583
				2910	5,101,225 – 5,101,338	-	5	120	80.04	-2.24	0.64	0.939443
1773	3R_DroMel_CAF1	5,101,882 – 5,102,041	- - - - - - - - -	2911	5,101,882 – 5,102,001	+	5	120	88.89	-1.80	0.71	0.546070
				2912	5,101,922 – 5,102,041	+	4	120	91.78	-1.99	0.87	0.916200
				2913	5,101,922 – 5,102,041	-	4	120	91.78	-2.25	0.84	0.936480
1774	3R_DroMel_CAF1	5,102,237 – 5,102,356	- - - - - - - - -	2914	5,102,237 – 5,102,356	+	5	120	97.07	-1.23	0.97	0.789549
1775	3R_DroMel_CAF1	5,102,396 – 5,102,507	- - - - - - - - -	2915	5,102,396 – 5,102,507	+	5	120	83.36	-2.36	0.59	0.786457
1776	3R_DroMel_CAF1	5,102,845 – 5,103,077	- - - - - - - - -	2916	5,102,845 – 5,102,965	-	5	120	95.50	-1.58	0.89	0.942909
				2917	5,102,925 – 5,103,044	-	5	120	92.48	-1.75	0.78	0.749094
				2918	5,102,965 – 5,103,077	-	5	120	77.76	-2.62	0.66	0.995095
1777	3R_DroMel_CAF1	5,103,155 – 5,103,289	- - - - - - - - -	2919	5,103,155 – 5,103,254	-	5	120	88.33	-2.28	0.79	0.966251
1777	3R_DroMel_CAF1	5,103,155 – 5,103,289	- - - - - - - - -	2920	5,103,195 – 5,103,289	-	5	120	84.32	-3.40	0.71	0.994027
1778	3R_DroMel_CAF1	5,104,355 – 5,104,504	- - - - - - - - -	2921	5,104,355 – 5,104,467	+	5	120	87.67	-2.02	0.72	0.768276
1778	3R_DroMel_CAF1	5,104,355 – 5,104,504	- - - - - - - - -	2922	5,104,387 – 5,104,504	+	5	120	86.88	-1.77	0.79	0.776320
1779	3R_DroMel_CAF1	5,110,319 – 5,110,493	- - - - - - - - -	2923	5,110,319 – 5,110,415	+	5	120	87.59	-3.03	0.84	0.998976
				2924	5,110,319 – 5,110,415	-	5	120	87.59	-3.54	0.86	0.999782
				2925	5,110,335 – 5,110,454	+	5	120	96.57	-2.47	0.95	0.999807
				2926	5,110,335 – 5,110,454	-	5	120	96.57	-1.75	0.82	0.782187
				2927	5,110,375 – 5,110,493	+	5	120	95.96	-2.01	0.94	0.998578
				2928	5,110,375 – 5,110,493	-	5	120	95.96	-2.44	0.79	0.921863
1780	3R_DroMel_CAF1	5,111,533 – 5,111,755	- - - - - - - - -	2929	5,111,533 – 5,111,647	-	5	120	89.65	-1.77	0.76	0.739418
				2930	5,111,607 – 5,111,720	+	5	120	87.48	-2.73	0.74	0.970135
				2931	5,111,607 – 5,111,720	-	5	120	87.48	-2.84	0.70	0.931732
				2932	5,111,647 – 5,111,755	+	5	120	86.30	-2.72	0.76	0.980341
				2933	5,111,647 – 5,111,755	-	5	120	86.30	-2.80	0.71	0.958666
1781	3R_DroMel_CAF1	5,112,308 – 5,112,421	- - - - - - - - -	2934	5,112,308 – 5,112,421	-	5	116	89.99	-1.84	0.80	0.890499
1782	3R_DroMel_CAF1	5,112,950 – 5,113,070	- - - - - - - - -	2935	5,112,950 – 5,113,070	-	5	120	95.25	-1.39	0.88	0.800282
1783	3R_DroMel_CAF1	5,113,110 – 5,113,225	- - - - - - - - -	2936	5,113,110 – 5,113,225	-	4	116	71.24	-2.49	0.43	0.921007
1784	3R_DroMel_CAF1	5,113,857 – 5,114,171	- - - - - - - - -	2937	5,113,857 – 5,113,976	-	5	120	93.13	-1.74	0.78	0.744869
				2938	5,113,897 – 5,114,016	+	5	120	92.04	-2.05	0.74	0.735483
				2939	5,113,897 – 5,114,016	-	5	120	92.04	-2.76	0.75	0.949863
				2940	5,113,937 – 5,114,056	+	5	120	87.94	-1.55	0.74	0.516924
				2941	5,114,056 – 5,114,171	-	5	120	90.01	-1.79	0.76	0.751984
1785	3R_DroMel_CAF1	5,114,274 – 5,114,394	- - - - - - - - -	2942	5,114,274 – 5,114,394	+	5	120	95.31	-2.31	0.81	0.970179
1786	3R_DroMel_CAF1	5,115,210 – 5,115,328	- - - - - - - - -	2943	5,115,210 – 5,115,328	+	5	120	95.28	-2.35	0.80	0.949663
1787	3R_DroMel_CAF1	5,115,435 – 5,115,538	- - - - - - - - -	2944	5,115,435 – 5,115,538	-	3	104	88.08	-1.65	0.86	0.569099
1788	3R_DroMel_CAF1	5,116,789 – 5,116,921	- - - - - - - - -	2945	5,116,789 – 5,116,881	-	3	104	84.94	-2.81	0.79	0.950007
1788	3R_DroMel_CAF1	5,116,789 – 5,116,921	- - - - - - - - -	2946	5,116,804 – 5,116,921	+	5	120	86.04	-1.59	0.74	0.561794
1789	3R_DroMel_CAF1	5,117,252 – 5,117,355	- - - - - - - - -	2947	5,117,252 – 5,117,355	-	5	120	83.50	-1.64	0.73	0.599798
1790	3R_DroMel_CAF1	5,117,653 – 5,117,811	- - - - - - - - -	2948	5,117,653 – 5,117,771	+	5	120	94.77	-1.28	0.85	0.527684
				2949	5,117,691 – 5,117,811	+	5	120	95.17	-1.12	0.92	0.592317
				2950	5,117,691 – 5,117,811	-	5	120	95.17	-1.41	0.90	0.877614
1791	3R_DroMel_CAF1	5,118,185 – 5,118,300	- - - - - - - - -	2951	5,118,185 – 5,118,300	+	4	120	89.65	-1.66	0.75	0.625861
1792	3R_DroMel_CAF1	5,118,541 – 5,118,688	- - - - - - - - -	2952	5,118,541 – 5,118,648	+	4	120	84.58	-1.68	0.66	0.598341
				2953	5,118,574 – 5,118,688	+	4	120	89.62	-1.62	0.88	0.780005
				2954	5,118,574 – 5,118,688	-	4	120	89.62	-1.84	0.76	0.741023
1793	3R_DroMel_CAF1	5,119,174 – 5,119,273	- - - - - - - - -	2955	5,119,174 – 5,119,273	+	4	117	83.36	-2.03	0.64	0.755427
1793	3R_DroMel_CAF1	5,119,174 – 5,119,273	- - - - - - - - -	2956	5,119,174 – 5,119,273	-	4	117	83.36	-2.50	0.60	0.854302
1794	3R_DroMel_CAF1	5,120,323 – 5,120,442	- - "RNAmicro=f:5120323_t:5120442_strand:-_p:0.529414" - - - - - -	2957	5,120,323 – 5,120,442	+	3	120	91.55	-3.97	0.96	0.993008
1794	3R_DroMel_CAF1	5,120,323 – 5,120,442		2958	5,120,323 – 5,120,442	-	3	120	91.55	-2.00	0.97	0.938192
1795	3R_DroMel_CAF1	5,127,212 – 5,127,314	- - - - - - - - -	2959	5,127,212 – 5,127,314	+	6	115	72.51	-1.33	0.59	0.617508
1796	3R_DroMel_CAF1	5,127,518 – 5,127,609	- - - - - - - - -	2960	5,127,518 – 5,127,609	-	5	92	90.01	-1.52	0.82	0.737461
1797	3R_DroMel_CAF1	5,128,879 – 5,128,973	- - - - - - - - -	2961	5,128,879 – 5,128,973	+	5	111	62.83	-2.32	0.41	0.962386
1797	3R_DroMel_CAF1	5,128,879 – 5,128,973	- - - - - - - - -	2962	5,128,879 – 5,128,973	-	5	111	62.83	-2.15	0.35	0.762179
1798	3R_DroMel_CAF1	5,138,220 – 5,138,314	- - - - - - - - -	2963	5,138,220 – 5,138,314	+	6	104	74.93	-1.91	0.52	0.852736
1799	3R_DroMel_CAF1	5,142,658 – 5,142,786	- - - - - - - - -	2964	5,142,658 – 5,142,749	-	6	102	76.88	-2.57	0.36	0.808422
1799	3R_DroMel_CAF1	5,142,658 – 5,142,786	- - - - - - - - -	2965	5,142,687 – 5,142,786	-	6	110	75.41	-2.77	0.43	0.985419
1800	3R_DroMel_CAF1	5,146,234 – 5,146,331	- - - - - - - - -	2966	5,146,234 – 5,146,331	+	6	109	82.50	-1.99	0.61	0.529485
1800	3R_DroMel_CAF1	5,146,234 – 5,146,331	- - - - - - - - -	2967	5,146,234 – 5,146,331	-	6	109	82.50	-1.93	0.66	0.630701
1801	3R_DroMel_CAF1	5,150,968 – 5,151,125	- - - - - - - - -	2968	5,150,968 – 5,151,058	-	6	108	76.27	-1.87	0.50	0.670040
1801	3R_DroMel_CAF1	5,150,968 – 5,151,125	- - - - - - - - -	2969	5,151,034 – 5,151,125	+	6	113	79.39	-1.48	0.63	0.624046
1802	3R_DroMel_CAF1	5,153,317 – 5,153,407	- - - - - - - - -	2970	5,153,317 – 5,153,407	-	6	99	90.74	-1.61	0.92	0.935213
1803	3R_DroMel_CAF1	5,156,616 – 5,156,725	- - - - - - - - -	2971	5,156,616 – 5,156,725	-	6	120	75.45	-2.20	0.64	0.981848
1804	3R_DroMel_CAF1	5,161,595 – 5,161,687	- - - "knownCDS=Parent=FBtr0082017, FBtr0082018, FBtr0082019;Name=CG8121-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8121-RA, FlyBase+Annotation+IDs:CG8121-RC, FlyBase+Annotation+IDs:CG8121-RB" - - - - -	2972	5,161,595 – 5,161,687	+	6	97	81.61	-1.17	0.80	0.508581
1805	3R_DroMel_CAF1	5,163,563 – 5,163,661	- - - - - - - - -	2973	5,163,563 – 5,163,661	-	3	101	66.78	-2.69	0.39	0.720100
1806	3R_DroMel_CAF1	5,164,124 – 5,164,227	- - - - - - - - -	2974	5,164,124 – 5,164,227	+	5	107	94.09	-1.26	0.90	0.741786
1807	3R_DroMel_CAF1	5,164,823 – 5,164,922	- - - - - - - - -	2975	5,164,823 – 5,164,922	+	6	101	80.13	-2.93	0.58	0.950675
1807	3R_DroMel_CAF1	5,164,823 – 5,164,922	- - - - - - - - -	2976	5,164,823 – 5,164,922	-	6	101	80.13	-1.89	0.54	0.500000
1808	3R_DroMel_CAF1	5,165,635 – 5,165,766	- - - - - - - - -	2977	5,165,635 – 5,165,733	+	5	98	92.65	-2.61	0.99	0.999980
				2978	5,165,635 – 5,165,733	-	5	98	92.65	-2.37	0.98	0.999938
				2979	5,165,662 – 5,165,766	-	5	104	92.31	-1.95	0.81	0.942892
1809	3R_DroMel_CAF1	5,166,295 – 5,166,391	- - - - - - - - -	2980	5,166,295 – 5,166,391	-	6	116	68.18	-1.37	0.51	0.500000
1810	3R_DroMel_CAF1	5,167,655 – 5,167,777	- - - - - - - - -	2981	5,167,655 – 5,167,757	-	5	102	97.25	-2.00	0.96	0.998333
1810	3R_DroMel_CAF1	5,167,655 – 5,167,777	- - - - - - - - -	2982	5,167,687 – 5,167,777	-	5	92	95.81	-1.22	0.94	0.785644
1811	3R_DroMel_CAF1	5,170,796 – 5,170,962	- - - - - - - - -	2983	5,170,796 – 5,170,902	+	5	106	95.09	-1.21	0.94	0.781994
				2984	5,170,865 – 5,170,962	+	5	97	96.28	-1.63	0.90	0.949033
				2985	5,170,865 – 5,170,962	-	5	97	96.28	-1.76	0.87	0.941684
1812	3R_DroMel_CAF1	5,176,321 – 5,176,418	- - - - - - - - -	2986	5,176,321 – 5,176,418	+	5	113	80.20	-2.06	0.63	0.867712
1813	3R_DroMel_CAF1	5,179,351 – 5,179,450	- - - - - - - - -	2987	5,179,351 – 5,179,450	-	5	99	96.06	-1.66	0.90	0.968294
1814	3R_DroMel_CAF1	5,191,465 – 5,191,560	- - - "knownCDS=Parent=FBtr0082026;Name=CG8129-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8129-RB" - - - - -	2988	5,191,465 – 5,191,560	+	6	110	81.47	-1.57	0.75	0.712923
1815	3R_DroMel_CAF1	5,192,913 – 5,193,008	- - - - - - - - -	2989	5,192,913 – 5,193,008	-	6	97	75.11	-1.36	0.60	0.577007
1816	3R_DroMel_CAF1	5,193,053 – 5,193,173	- - - "knownCDS=Parent=FBtr0082026;Name=CG8129-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8129-RB" - - - - -	2990	5,193,053 – 5,193,173	-	3	120	81.60	0.11	0.93	0.506114
1817	3R_DroMel_CAF1	5,193,440 – 5,193,557	- - - - - - - - -	2991	5,193,440 – 5,193,557	+	3	120	95.52	-2.14	0.93	0.869081
1818	3R_DroMel_CAF1	5,193,789 – 5,193,903	- - - - - - - - -	2992	5,193,789 – 5,193,903	+	3	120	94.92	-2.04	0.86	0.619079
1819	3R_DroMel_CAF1	5,199,485 – 5,199,613	- - - "knownCDS=Parent=FBtr0082051;Name=Fps85D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8874-RB" - - - - -	2993	5,199,485 – 5,199,591	-	6	120	80.04	-1.14	0.75	0.592318
1819	3R_DroMel_CAF1	5,199,485 – 5,199,613		2994	5,199,511 – 5,199,613	-	6	120	78.33	-1.28	0.74	0.774636
1820	3R_DroMel_CAF1	5,199,799 – 5,199,893	- - - - - - - - -	2995	5,199,799 – 5,199,893	+	5	96	93.88	-2.12	0.78	0.889247
1821	3R_DroMel_CAF1	5,212,180 – 5,212,274	- - - - - - - - -	2996	5,212,180 – 5,212,274	-	3	104	86.64	-2.05	0.80	0.703728
1822	3R_DroMel_CAF1	5,212,569 – 5,212,661	- - - - - - - - -	2997	5,212,569 – 5,212,661	+	6	104	82.89	-2.36	0.70	0.765212
1822	3R_DroMel_CAF1	5,212,569 – 5,212,661	- - - - - - - - -	2998	5,212,569 – 5,212,661	-	6	104	82.89	-3.19	0.58	0.803678
1823	3R_DroMel_CAF1	5,215,303 – 5,215,417	- - - - - - - - -	2999	5,215,303 – 5,215,417	+	3	117	87.93	-2.80	0.67	0.698114
1824	3R_DroMel_CAF1	5,222,215 – 5,222,306	- - - - - - - - -	3000	5,222,215 – 5,222,306	-	6	91	86.05	-2.09	0.79	0.635211
1825	3R_DroMel_CAF1	5,222,491 – 5,222,611	- - - - - - - - -	3001	5,222,491 – 5,222,590	+	6	104	71.49	-1.88	0.46	0.837600
				3002	5,222,518 – 5,222,611	+	4	96	86.02	-1.84	0.78	0.812156
				3003	5,222,518 – 5,222,611	-	4	96	86.02	-1.83	0.66	0.644268
1826	3R_DroMel_CAF1	5,222,721 – 5,222,834	- - - - - - - - -	3004	5,222,721 – 5,222,834	+	4	114	73.20	-2.22	0.59	0.986361
1827	3R_DroMel_CAF1	5,226,200 – 5,226,293	- - - "knownCDS=Parent=FBtr0082050;Name=RpL34b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9354-RA" - - - - -	3005	5,226,200 – 5,226,293	+	3	93	96.42	-1.97	0.94	0.817195
1827	3R_DroMel_CAF1	5,226,200 – 5,226,293		3006	5,226,200 – 5,226,293	-	3	93	96.42	-3.10	0.92	0.971487
1828	3R_DroMel_CAF1	5,227,590 – 5,227,710	- - - "knownCDS=Parent=FBtr0082029;Name=CG8132-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8132-RA" - - - - -	3007	5,227,590 – 5,227,710	+	6	120	80.17	-1.63	0.58	0.500000
1829	3R_DroMel_CAF1	5,234,225 – 5,234,320	- - - - - - - - -	3008	5,234,225 – 5,234,320	+	5	95	81.52	-2.42	0.59	0.916329
1829	3R_DroMel_CAF1	5,234,225 – 5,234,320	- - - - - - - - -	3009	5,234,225 – 5,234,320	-	5	95	81.52	-1.75	0.65	0.628467
1830	3R_DroMel_CAF1	5,236,072 – 5,236,220	- - - - - - - - -	3010	5,236,072 – 5,236,182	-	6	110	77.43	-1.89	0.56	0.806125
1830	3R_DroMel_CAF1	5,236,072 – 5,236,220	- - - - - - - - -	3011	5,236,111 – 5,236,220	-	6	111	80.67	-3.40	0.62	0.966402
1831	3R_DroMel_CAF1	5,237,995 – 5,238,113	- - - - - - - - -	3012	5,237,995 – 5,238,113	-	5	120	79.40	-1.84	0.57	0.633561
1832	3R_DroMel_CAF1	5,239,133 – 5,239,279	- - - - - - - - -	3013	5,239,133 – 5,239,239	-	5	106	79.08	-1.78	0.59	0.610000
1832	3R_DroMel_CAF1	5,239,133 – 5,239,279	- - - - - - - - -	3014	5,239,160 – 5,239,279	-	5	119	83.66	-2.11	0.57	0.554642
1833	3R_DroMel_CAF1	5,242,125 – 5,242,224	- - - "knownCDS=Parent=FBtr0082031;Name=alpha-Man-II-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18802-RA" - - - - -	3015	5,242,125 – 5,242,224	-	6	117	78.92	-1.99	0.72	0.932738
1834	3R_DroMel_CAF1	5,247,910 – 5,248,007	- - - - - - - - -	3016	5,247,910 – 5,248,007	+	5	100	81.52	-1.79	0.63	0.613981
1835	3R_DroMel_CAF1	5,248,454 – 5,248,567	- - - - - - - - -	3017	5,248,454 – 5,248,567	-	5	119	91.42	-1.66	0.81	0.827677
1836	3R_DroMel_CAF1	5,248,700 – 5,248,808	- - - - - - - - -	3018	5,248,700 – 5,248,808	-	5	120	75.51	-1.78	0.56	0.743084
1837	3R_DroMel_CAF1	5,252,328 – 5,252,422	- - - - - - - - -	3019	5,252,328 – 5,252,422	-	6	102	66.20	-2.43	0.46	0.991547
1838	3R_DroMel_CAF1	5,271,483 – 5,271,628	- - - "knownCDS=Parent=FBtr0082038;Name=ps-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8144-RD" - - - - -	3020	5,271,483 – 5,271,603	+	6	120	76.39	-1.90	0.46	0.535705
1838	3R_DroMel_CAF1	5,271,483 – 5,271,628		3021	5,271,523 – 5,271,628	+	6	113	78.38	-2.04	0.69	0.943254
1839	3R_DroMel_CAF1	5,271,860 – 5,272,004	- - - "knownCDS=Parent=FBtr0082037;Name=ps-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8144-RB" - - - - -	3022	5,271,860 – 5,271,974	+	6	114	77.82	-2.47	0.67	0.977406
				3023	5,271,860 – 5,271,974	-	6	114	77.82	-2.70	0.66	0.983748
				3024	5,271,900 – 5,272,004	+	6	104	76.23	-1.04	0.68	0.546651
				3025	5,271,900 – 5,272,004	-	6	104	76.23	-1.69	0.55	0.695318
1840	3R_DroMel_CAF1	5,273,350 – 5,273,509	- - - "knownCDS=Parent=FBtr0082039;Name=ps-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8144-RC" - - - - -	3026	5,273,350 – 5,273,469	-	6	120	94.08	-1.69	0.86	0.780035
1840	3R_DroMel_CAF1	5,273,350 – 5,273,509		3027	5,273,389 – 5,273,509	-	6	120	94.67	-1.59	0.93	0.976605
1841	3R_DroMel_CAF1	5,277,384 – 5,277,542	- - - - - - - - -	3028	5,277,384 – 5,277,479	-	3	106	86.04	-2.16	0.81	0.804247
				3029	5,277,408 – 5,277,517	-	3	117	86.34	-2.24	0.80	0.800474
				3030	5,277,439 – 5,277,542	-	4	103	82.54	-1.81	0.72	0.777022
1842	3R_DroMel_CAF1	5,283,463 – 5,283,559	- - - - - - - - -	3031	5,283,463 – 5,283,559	+	6	118	80.62	-1.55	0.89	0.821245
1842	3R_DroMel_CAF1	5,283,463 – 5,283,559	- - - - - - - - -	3032	5,283,463 – 5,283,559	-	6	118	80.62	-1.14	0.72	0.522081
1843	3R_DroMel_CAF1	5,283,628 – 5,283,725	- - - - - - - - -	3033	5,283,628 – 5,283,725	-	6	104	79.08	-1.30	0.81	0.780717
1844	3R_DroMel_CAF1	5,284,432 – 5,284,542	- - - "knownCDS=Parent=FBtr0082042;Name=CG9363-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9363-RA" - - - - -	3034	5,284,432 – 5,284,542	-	6	120	75.93	-1.92	0.72	0.972828
1845	3R_DroMel_CAF1	5,297,945 – 5,298,041	- - - "knownCDS=Parent=FBtr0082125;Name=CG16779-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16779-RA" - - - - -	3035	5,297,945 – 5,298,041	+	6	96	82.08	-2.21	0.62	0.701522
1845	3R_DroMel_CAF1	5,297,945 – 5,298,041		3036	5,297,945 – 5,298,041	-	6	96	82.08	-1.66	0.63	0.500000
1846	3R_DroMel_CAF1	5,298,912 – 5,299,139	- - - "knownCDS=Parent=FBtr0082125;Name=CG16779-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16779-RA" - - - - -	3037	5,298,912 – 5,299,023	+	5	113	82.40	-2.33	0.61	0.868085
				3038	5,298,946 – 5,299,063	+	5	117	89.57	-1.74	0.86	0.940168
				3039	5,299,023 – 5,299,139	-	6	120	89.70	-1.26	0.89	0.505348
1847	3R_DroMel_CAF1	5,300,295 – 5,300,385	- - - - - - - - -	3040	5,300,295 – 5,300,385	-	5	94	86.11	-1.64	0.76	0.618337
1848	3R_DroMel_CAF1	5,308,193 – 5,308,286	- - - - - - - - -	3041	5,308,193 – 5,308,286	-	4	94	86.99	-1.59	0.71	0.604982
1849	3R_DroMel_CAF1	5,313,899 – 5,314,016	- - - - - - - - -	3042	5,313,899 – 5,314,016	+	5	119	69.02	-2.37	0.28	0.975746
1850	3R_DroMel_CAF1	5,316,818 – 5,316,918	- - - - - - - - -	3043	5,316,818 – 5,316,918	+	6	100	80.43	-1.38	0.68	0.605812
1851	3R_DroMel_CAF1	5,317,338 – 5,317,428	- - - - - - - - -	3044	5,317,338 – 5,317,428	-	5	120	70.40	-1.67	0.16	0.536474
1852	3R_DroMel_CAF1	5,323,341 – 5,323,456	- - - "knownCDS=Parent=FBtr0082124;Name=RhoL-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9366-RA" - - - - -	3045	5,323,341 – 5,323,456	+	3	120	92.68	-1.91	0.90	0.738027
1853	3R_DroMel_CAF1	5,324,767 – 5,324,857	- - - - - - - - -	3046	5,324,767 – 5,324,857	+	3	120	71.21	-2.38	0.68	0.999924
1853	3R_DroMel_CAF1	5,324,767 – 5,324,857	- - - - - - - - -	3047	5,324,767 – 5,324,857	-	3	120	71.21	-1.85	0.84	0.999671
1854	3R_DroMel_CAF1	5,325,866 – 5,325,986	- - - - - - - - -	3048	5,325,866 – 5,325,986	+	3	120	82.08	-1.67	0.71	0.583114
1855	3R_DroMel_CAF1	5,326,323 – 5,326,501	- - - - - - - - -	3049	5,326,323 – 5,326,439	-	3	120	89.83	-1.32	0.97	0.701744
				3050	5,326,359 – 5,326,461	-	3	120	83.63	-1.80	0.84	0.784026
				3051	5,326,399 – 5,326,501	-	3	120	83.04	-1.57	0.76	0.528477
1856	3R_DroMel_CAF1	5,327,391 – 5,327,486	- - - - - - - - -	3052	5,327,391 – 5,327,486	-	3	120	83.88	-1.83	0.68	0.529982
1857	3R_DroMel_CAF1	5,328,288 – 5,328,427	- - - - - - - - -	3053	5,328,288 – 5,328,389	-	3	120	70.96	-1.95	0.56	0.951797
1857	3R_DroMel_CAF1	5,328,288 – 5,328,427	- - - - - - - - -	3054	5,328,323 – 5,328,427	-	3	120	74.25	-1.95	0.57	0.872542
1858	3R_DroMel_CAF1	5,331,097 – 5,331,199	- - - "knownCDS=Parent=FBtr0082061;Name=CG8149-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8149-RA" - - - - -	3055	5,331,097 – 5,331,199	+	6	110	74.58	-2.22	0.54	0.971317
1858	3R_DroMel_CAF1	5,331,097 – 5,331,199		3056	5,331,097 – 5,331,199	-	6	110	74.58	-1.66	0.62	0.901190
1859	3R_DroMel_CAF1	5,332,729 – 5,332,878	- - - "knownCDS=Parent=FBtr0082123;Name=CG9373-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9373-RA" - - - - -	3057	5,332,729 – 5,332,838	+	6	112	81.11	-1.24	0.69	0.514592
				3058	5,332,729 – 5,332,838	-	6	112	81.11	-2.01	0.59	0.667387
				3059	5,332,767 – 5,332,878	-	6	117	77.93	-2.23	0.60	0.944261
1860	3R_DroMel_CAF1	5,337,776 – 5,337,883	- - - - - - - - -	3060	5,337,776 – 5,337,883	+	5	109	78.01	-1.95	0.47	0.658108
1860	3R_DroMel_CAF1	5,337,776 – 5,337,883	- - - - - - - - -	3061	5,337,776 – 5,337,883	-	5	109	78.01	-1.90	0.58	0.779311
1861	3R_DroMel_CAF1	5,343,127 – 5,343,229	- - - - - - - - -	3062	5,343,127 – 5,343,229	+	4	119	70.94	-2.84	0.49	0.997152
1862	3R_DroMel_CAF1	5,347,198 – 5,347,312	- - - "knownCDS=Parent=FBtr0082065;Name=CG8176-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8176-RA" - - - - -	3063	5,347,198 – 5,347,312	+	6	120	83.56	-2.00	0.67	0.553755
1863	3R_DroMel_CAF1	5,349,266 – 5,349,358	- - - - - - - - -	3064	5,349,266 – 5,349,358	+	5	92	98.48	-1.97	0.95	0.993894
1863	3R_DroMel_CAF1	5,349,266 – 5,349,358	- - - - - - - - -	3065	5,349,266 – 5,349,358	-	5	92	98.48	-1.52	0.97	0.934925
1864	3R_DroMel_CAF1	5,352,548 – 5,352,654	- - - - - - - - -	3066	5,352,548 – 5,352,654	-	5	106	88.77	-2.00	0.83	0.959874
1865	3R_DroMel_CAF1	5,356,091 – 5,356,258	- - - - - - - - -	3067	5,356,091 – 5,356,185	+	5	94	97.23	-1.93	0.97	0.997649
1865	3R_DroMel_CAF1	5,356,091 – 5,356,258	- - - - - - - - -	3068	5,356,145 – 5,356,258	-	5	120	89.95	-1.38	0.79	0.508009
1866	3R_DroMel_CAF1	5,359,070 – 5,359,177	- - - - - - - - -	3069	5,359,070 – 5,359,177	+	3	107	87.74	-1.04	1.03	0.932949
1867	3R_DroMel_CAF1	5,360,355 – 5,360,449	- - - - - - - - -	3070	5,360,355 – 5,360,449	+	5	97	89.71	-1.39	0.82	0.581659
1868	3R_DroMel_CAF1	5,362,813 – 5,362,932	- - - - - - - - -	3071	5,362,813 – 5,362,932	+	5	120	99.33	-1.30	0.93	0.523916
1869	3R_DroMel_CAF1	5,363,758 – 5,363,913	- - - - - - - - -	3072	5,363,758 – 5,363,876	-	4	118	90.75	-1.22	0.96	0.543672
1869	3R_DroMel_CAF1	5,363,758 – 5,363,913	- - - - - - - - -	3073	5,363,797 – 5,363,913	-	5	120	88.00	-2.25	0.92	0.997495
1870	3R_DroMel_CAF1	5,364,944 – 5,365,038	- - - "knownCDS=Parent=FBtr0082116, FBtr0082117;Name=mura-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9381-RA, FlyBase+Annotation+IDs:CG9381-RB" - - - - -	3074	5,364,944 – 5,365,038	+	6	100	80.33	-1.36	0.69	0.628690
1871	3R_DroMel_CAF1	5,365,969 – 5,366,101	- - - "knownCDS=Parent=FBtr0082116, FBtr0082117;Name=mura-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9381-RA, FlyBase+Annotation+IDs:CG9381-RB" - - - - -	3075	5,365,969 – 5,366,067	-	6	108	80.82	-1.88	0.63	0.728123
				3076	5,365,996 – 5,366,101	+	6	108	84.05	-2.55	0.68	0.639574
				3077	5,365,996 – 5,366,101	-	6	108	84.05	-2.70	0.74	0.802189
1872	3R_DroMel_CAF1	5,366,399 – 5,366,515	- - - "knownCDS=Parent=FBtr0082116, FBtr0082117;Name=mura-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9381-RA, FlyBase+Annotation+IDs:CG9381-RB" - - - - -	3078	5,366,399 – 5,366,515	+	6	120	79.78	-1.80	0.61	0.722704
1873	3R_DroMel_CAF1	5,367,821 – 5,367,926	- - - "knownCDS=Parent=FBtr0082118;Name=mura-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9381-RC" - - - - -	3079	5,367,821 – 5,367,926	-	6	114	92.09	-1.41	0.97	0.975025
1874	3R_DroMel_CAF1	5,375,777 – 5,375,888	- - - - - - - - -	3080	5,375,777 – 5,375,888	+	3	111	97.00	-1.64	0.97	0.684208
1875	3R_DroMel_CAF1	5,376,705 – 5,376,798	- - - - - - - - -	3081	5,376,705 – 5,376,798	-	5	97	68.70	-2.55	0.20	0.973902
1876	3R_DroMel_CAF1	5,384,279 – 5,384,399	- - - "knownCDS=Parent=FBtr0082114;Name=AP-47-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9388-RA" - - - - -	3082	5,384,279 – 5,384,399	-	6	120	83.11	-1.48	0.77	0.556510
1877	3R_DroMel_CAF1	5,391,378 – 5,391,498	- - - "knownCDS=Parent=FBtr0082070;Name=CG8228-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8228-RA" - - - - -	3083	5,391,378 – 5,391,498	-	6	120	77.94	-1.51	0.67	0.800375
1878	3R_DroMel_CAF1	5,397,078 – 5,397,197	- - - - - - - - -	3084	5,397,078 – 5,397,197	+	3	119	86.27	-2.01	0.84	0.783276
1879	3R_DroMel_CAF1	5,398,700 – 5,398,912	- - - - - - - - -	3085	5,398,700 – 5,398,794	-	3	120	69.03	-1.37	0.58	0.609624
				3086	5,398,754 – 5,398,874	+	4	120	84.11	-2.93	0.77	0.992174
				3087	5,398,754 – 5,398,874	-	4	120	84.11	-3.17	0.69	0.989267
				3088	5,398,794 – 5,398,912	+	4	120	91.46	-1.52	0.80	0.541254
1880	3R_DroMel_CAF1	5,399,219 – 5,399,316	- - - - - - - - -	3089	5,399,219 – 5,399,316	+	3	97	95.88	-3.36	0.92	0.978548
1881	3R_DroMel_CAF1	5,399,574 – 5,399,679	- - - - - - - - -	3090	5,399,574 – 5,399,679	+	3	105	90.16	-2.22	0.89	0.882910
1882	3R_DroMel_CAF1	5,400,270 – 5,400,384	- - - - - - - - -	3091	5,400,270 – 5,400,384	-	3	120	83.62	-2.30	0.61	0.578237
1883	3R_DroMel_CAF1	5,400,466 – 5,400,580	- - - - - - - - -	3092	5,400,466 – 5,400,580	-	4	120	79.49	-1.81	0.61	0.607600
1884	3R_DroMel_CAF1	5,400,858 – 5,400,978	- - - - - - - - -	3093	5,400,858 – 5,400,978	+	4	120	83.61	-1.68	0.68	0.634281
1885	3R_DroMel_CAF1	5,401,052 – 5,401,169	- - - - - - - - -	3094	5,401,052 – 5,401,169	-	4	120	83.24	-1.90	0.71	0.811644
1886	3R_DroMel_CAF1	5,401,571 – 5,401,681	- - - "knownCDS=Parent=FBtr0082106, FBtr0082107;Name=Kap-alpha3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9423-RA, FlyBase+Annotation+IDs:CG9423-RB" - - - - -	3095	5,401,571 – 5,401,681	-	6	113	76.33	-1.65	0.60	0.813035
1887	3R_DroMel_CAF1	5,407,592 – 5,407,779	- - - - - - - - -	3096	5,407,592 – 5,407,700	-	5	120	90.25	-2.95	0.65	0.558992
				3097	5,407,629 – 5,407,739	-	6	120	86.71	-3.65	0.76	0.915062
				3098	5,407,662 – 5,407,779	-	6	120	90.28	-2.71	0.79	0.703800
1888	3R_DroMel_CAF1	5,407,997 – 5,408,106	- - - - - - - - -	3099	5,407,997 – 5,408,106	+	5	109	91.56	-1.60	0.80	0.747106
1889	3R_DroMel_CAF1	5,412,442 – 5,412,535	- - - - - - - - -	3100	5,412,442 – 5,412,535	-	3	93	70.25	-1.94	0.62	0.995025
1890	3R_DroMel_CAF1	5,415,693 – 5,415,785	- - - "knownCDS=Parent=FBtr0082105;Name=bocksbeutel-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9424-RA" - - - - -	3101	5,415,693 – 5,415,785	+	6	94	82.66	-1.92	0.64	0.578319
1891	3R_DroMel_CAF1	5,418,171 – 5,418,275	- - - - - - - - -	3102	5,418,171 – 5,418,275	+	5	120	79.37	-1.60	0.76	0.768028
1892	3R_DroMel_CAF1	5,419,632 – 5,419,744	- - - - - - - - -	3103	5,419,632 – 5,419,744	+	6	120	84.32	-3.33	0.72	0.852204
1892	3R_DroMel_CAF1	5,419,632 – 5,419,744	- - - - - - - - -	3104	5,419,632 – 5,419,744	-	6	120	84.32	-2.84	0.73	0.779529
1893	3R_DroMel_CAF1	5,420,729 – 5,420,829	- - - - - - - - -	3105	5,420,729 – 5,420,829	+	4	120	79.07	-3.35	0.55	0.996351
1894	3R_DroMel_CAF1	5,420,934 – 5,421,025	- - - - - - - - -	3106	5,420,934 – 5,421,025	-	4	91	84.87	-1.69	0.74	0.700692
1895	3R_DroMel_CAF1	5,421,155 – 5,421,293	- - - - - - - - -	3107	5,421,155 – 5,421,254	+	4	99	95.62	-1.52	0.89	0.522984
				3108	5,421,155 – 5,421,254	-	4	99	95.62	-2.11	0.90	0.908515
				3109	5,421,174 – 5,421,293	-	4	120	91.97	-1.53	0.80	0.542191
1896	3R_DroMel_CAF1	5,421,776 – 5,421,886	- - - - - - - - -	3110	5,421,776 – 5,421,866	+	4	91	83.75	-2.92	0.78	0.993618
				3111	5,421,776 – 5,421,866	-	4	91	83.75	-2.47	0.78	0.975489
				3112	5,421,793 – 5,421,886	+	4	94	82.43	-4.45	0.80	0.999225
				3113	5,421,793 – 5,421,886	-	4	94	82.43	-3.78	0.73	0.998866
1897	3R_DroMel_CAF1	5,421,901 – 5,422,302	- - - - - - - - -	3114	5,421,901 – 5,422,005	+	5	120	80.89	-2.01	0.61	0.771026
				3115	5,421,981 – 5,422,078	+	4	115	89.94	-1.47	0.86	0.640279
				3116	5,421,981 – 5,422,078	-	4	115	89.94	-1.51	0.89	0.719144
				3117	5,422,005 – 5,422,116	+	4	115	96.14	-1.99	0.93	0.896538
				3118	5,422,005 – 5,422,116	-	4	115	96.14	-2.33	0.90	0.925257
				3119	5,422,042 – 5,422,153	-	4	115	95.10	-2.06	0.85	0.800094
				3120	5,422,078 – 5,422,193	+	4	118	92.36	-2.33	0.79	0.854102
				3121	5,422,116 – 5,422,229	+	4	118	83.55	-3.03	0.64	0.975667
				3122	5,422,116 – 5,422,229	-	4	118	83.55	-1.85	0.62	0.599876
				3123	5,422,193 – 5,422,302	-	5	119	73.16	-1.66	0.22	0.662190
1898	3R_DroMel_CAF1	5,423,538 – 5,423,650	- - - - - - - - -	3124	5,423,538 – 5,423,650	+	4	120	88.25	-2.77	0.94	0.996946
1898	3R_DroMel_CAF1	5,423,538 – 5,423,650	- - - - - - - - -	3125	5,423,538 – 5,423,650	-	4	120	88.25	-2.84	0.86	0.991891
1899	3R_DroMel_CAF1	5,424,688 – 5,424,796	- - - - - - - - -	3126	5,424,688 – 5,424,796	-	4	115	85.01	-1.71	0.65	0.588703
1900	3R_DroMel_CAF1	5,425,529 – 5,425,632	- - - - - - - - -	3127	5,425,529 – 5,425,632	+	5	120	75.96	-2.06	0.32	0.893393
1901	3R_DroMel_CAF1	5,427,705 – 5,427,820	- - - - - - - - -	3128	5,427,705 – 5,427,820	-	5	115	88.51	-1.38	0.82	0.539427
1902	3R_DroMel_CAF1	5,428,445 – 5,428,557	- - - - - - - - -	3129	5,428,445 – 5,428,557	+	5	112	96.25	-1.55	0.85	0.787515
1903	3R_DroMel_CAF1	5,428,878 – 5,428,993	- - - - - - - - -	3130	5,428,878 – 5,428,993	+	6	120	83.26	-2.59	0.70	0.777745
1904	3R_DroMel_CAF1	5,429,365 – 5,429,467	- - - - - - - - -	3131	5,429,365 – 5,429,467	+	5	108	92.19	-2.21	0.84	0.990480
1904	3R_DroMel_CAF1	5,429,365 – 5,429,467	- - - - - - - - -	3132	5,429,365 – 5,429,467	-	5	108	92.19	-2.66	0.79	0.986392
1905	3R_DroMel_CAF1	5,430,730 – 5,430,821	- - - - - - - - -	3133	5,430,730 – 5,430,821	+	5	92	94.51	-1.38	0.93	0.925634
1906	3R_DroMel_CAF1	5,432,344 – 5,432,461	- - - - - - - - -	3134	5,432,344 – 5,432,461	+	5	118	97.53	-2.64	0.99	0.999908
1906	3R_DroMel_CAF1	5,432,344 – 5,432,461	- - - - - - - - -	3135	5,432,344 – 5,432,461	-	5	118	97.53	-1.70	1.00	0.992848
1907	3R_DroMel_CAF1	5,432,968 – 5,433,123	- - - - - - - - -	3136	5,432,968 – 5,433,083	+	5	120	88.93	-3.39	0.91	0.999948
				3137	5,432,968 – 5,433,083	-	5	120	88.93	-3.08	0.96	0.999970
				3138	5,433,008 – 5,433,123	-	5	120	95.95	-2.74	0.95	0.999943
1908	3R_DroMel_CAF1	5,433,336 – 5,433,440	- - - - - - - - -	3139	5,433,336 – 5,433,440	+	4	112	80.60	-3.33	0.43	0.732049
1909	3R_DroMel_CAF1	5,434,287 – 5,434,399	- - - - - - - - -	3140	5,434,287 – 5,434,399	+	5	120	94.29	-1.24	0.89	0.690001
1910	3R_DroMel_CAF1	5,434,779 – 5,434,887	- - - - - - - - -	3141	5,434,779 – 5,434,887	+	5	120	80.74	-1.47	0.72	0.524869
1911	3R_DroMel_CAF1	5,435,777 – 5,435,895	- - - - - - - - -	3142	5,435,777 – 5,435,895	+	5	120	86.17	-2.17	0.87	0.981104
1912	3R_DroMel_CAF1	5,436,047 – 5,436,165	- - - - - - - - -	3143	5,436,047 – 5,436,165	-	5	120	91.62	-1.93	0.73	0.630406
1913	3R_DroMel_CAF1	5,437,800 – 5,437,920	- - - - - - - - -	3144	5,437,800 – 5,437,920	+	5	120	95.50	-1.98	0.77	0.685598
1914	3R_DroMel_CAF1	5,438,590 – 5,438,722	- - - - - - - - -	3145	5,438,590 – 5,438,709	-	4	120	75.74	-2.54	0.80	0.999055
1914	3R_DroMel_CAF1	5,438,590 – 5,438,722	- - - - - - - - -	3146	5,438,630 – 5,438,722	-	4	93	90.13	-2.24	0.92	0.982923
1915	3R_DroMel_CAF1	5,438,841 – 5,438,961	- - - - - - - - -	3147	5,438,841 – 5,438,961	+	5	120	95.33	-1.61	0.89	0.955320
1916	3R_DroMel_CAF1	5,439,267 – 5,439,392	- - - - - - - - -	3148	5,439,267 – 5,439,365	+	5	120	82.85	-1.87	0.77	0.824062
				3149	5,439,289 – 5,439,392	+	5	120	81.13	-2.86	0.60	0.985472
				3150	5,439,289 – 5,439,392	-	5	120	81.13	-2.66	0.58	0.963308
1917	3R_DroMel_CAF1	5,439,694 – 5,439,805	- - - - - - - - -	3151	5,439,694 – 5,439,805	+	5	120	93.26	-2.28	0.79	0.956550
1918	3R_DroMel_CAF1	5,440,844 – 5,440,998	- - - - - - - - -	3152	5,440,844 – 5,440,958	-	5	120	95.88	-1.35	0.85	0.556882
1918	3R_DroMel_CAF1	5,440,844 – 5,440,998	- - - - - - - - -	3153	5,440,884 – 5,440,998	-	5	120	88.37	-1.62	0.78	0.679140
1919	3R_DroMel_CAF1	5,441,089 – 5,441,209	- - - - - - - - -	3154	5,441,089 – 5,441,209	-	5	120	97.50	-1.28	0.89	0.561667
1920	3R_DroMel_CAF1	5,441,392 – 5,441,512	- - - - - - - - -	3155	5,441,392 – 5,441,512	-	5	120	94.14	-1.84	0.84	0.956554
1921	3R_DroMel_CAF1	5,441,960 – 5,442,114	- - - - - - - - -	3156	5,441,960 – 5,442,074	+	3	120	89.83	-2.40	0.76	0.656937
				3157	5,441,960 – 5,442,074	-	3	120	89.83	-3.31	0.76	0.881430
				3158	5,441,994 – 5,442,114	-	5	120	97.42	-1.94	0.93	0.993526
1922	3R_DroMel_CAF1	5,442,689 – 5,442,780	- - - - - - - - -	3159	5,442,689 – 5,442,780	+	4	119	83.02	-2.02	0.90	0.952358
1923	3R_DroMel_CAF1	5,444,028 – 5,444,133	- - - - - - - - -	3160	5,444,028 – 5,444,133	-	5	120	79.83	-1.47	0.95	0.842853
1924	3R_DroMel_CAF1	5,444,433 – 5,444,630	- - - - - - - - -	3161	5,444,433 – 5,444,552	+	5	120	93.55	-1.95	0.81	0.938774
				3162	5,444,473 – 5,444,590	+	5	120	93.83	-3.38	0.78	0.991388
				3163	5,444,473 – 5,444,590	-	5	120	93.83	-2.38	0.73	0.670554
				3164	5,444,512 – 5,444,630	+	5	120	89.48	-2.05	0.70	0.599096
				3165	5,444,512 – 5,444,630	-	5	120	89.48	-1.75	0.77	0.736057
1925	3R_DroMel_CAF1	5,445,081 – 5,445,194	- - - - - - - - -	3166	5,445,081 – 5,445,194	-	3	113	77.68	-1.41	0.77	0.745355
1926	3R_DroMel_CAF1	5,445,963 – 5,446,141	- - - - - - - - -	3167	5,445,963 – 5,446,069	+	3	120	87.86	-2.33	0.82	0.816691
1926	3R_DroMel_CAF1	5,445,963 – 5,446,141	- - - - - - - - -	3168	5,446,043 – 5,446,141	-	3	119	80.53	-0.95	0.87	0.577216
1927	3R_DroMel_CAF1	5,446,679 – 5,446,846	- - - - - - - - -	3169	5,446,679 – 5,446,796	+	3	120	82.37	-2.22	0.66	0.814279
				3170	5,446,719 – 5,446,836	+	3	120	94.40	-2.52	0.84	0.784297
				3171	5,446,756 – 5,446,846	+	3	120	79.17	-1.50	0.72	0.631236
1928	3R_DroMel_CAF1	5,448,767 – 5,448,921	- - - - - - - - -	3172	5,448,767 – 5,448,881	+	6	118	76.98	-2.41	0.44	0.884447
1928	3R_DroMel_CAF1	5,448,767 – 5,448,921	- - - - - - - - -	3173	5,448,807 – 5,448,921	-	6	119	73.88	-1.43	0.65	0.861124
1929	3R_DroMel_CAF1	5,451,218 – 5,451,334	- - - - - - - - -	3174	5,451,218 – 5,451,334	-	5	116	86.72	-1.49	0.85	0.625316
1930	3R_DroMel_CAF1	5,453,755 – 5,453,875	- - - "knownCDS=Parent=FBtr0082077;Name=CG8319-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8319-RA" - - - - -	3175	5,453,755 – 5,453,875	-	6	120	77.39	-1.61	0.70	0.902064
1931	3R_DroMel_CAF1	5,454,464 – 5,454,583	- - - - - - - - -	3176	5,454,464 – 5,454,583	-	3	120	75.49	-1.46	0.73	0.842268
1932	3R_DroMel_CAF1	5,454,619 – 5,454,738	- - - - - - - - -	3177	5,454,619 – 5,454,738	+	3	120	95.00	-2.58	0.89	0.910674
1933	3R_DroMel_CAF1	5,457,438 – 5,457,587	- - - "knownCDS=Parent=FBtr0082078;Name=SpdS-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8327-RA" - - - - -	3178	5,457,438 – 5,457,553	-	6	120	79.32	-2.00	0.53	0.650567
1933	3R_DroMel_CAF1	5,457,438 – 5,457,587		3179	5,457,473 – 5,457,587	-	6	120	80.27	-1.50	0.65	0.624374
1934	3R_DroMel_CAF1	5,459,000 – 5,459,112	- - - - - - - - -	3180	5,459,000 – 5,459,112	-	4	115	93.10	-2.12	0.80	0.790105
1935	3R_DroMel_CAF1	5,462,765 – 5,462,874	- - - "knownCDS=Parent=FBtr0082102;Name=Scm-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9495-RA" - - - - -	3181	5,462,765 – 5,462,874	+	4	109	89.05	-2.10	0.67	0.605530
1935	3R_DroMel_CAF1	5,462,765 – 5,462,874		3182	5,462,765 – 5,462,874	-	4	109	89.05	-2.44	0.77	0.927672
1936	3R_DroMel_CAF1	5,466,879 – 5,466,993	- - - - - - - - -	3183	5,466,879 – 5,466,970	-	4	98	83.22	-2.32	0.73	0.951354
1936	3R_DroMel_CAF1	5,466,879 – 5,466,993	- - - - - - - - -	3184	5,466,900 – 5,466,993	-	5	120	64.70	-3.04	0.46	0.998743
1937	3R_DroMel_CAF1	5,473,994 – 5,474,085	- - - - - - - - -	3185	5,473,994 – 5,474,085	-	5	91	84.80	-1.71	0.71	0.607493
1938	3R_DroMel_CAF1	5,474,534 – 5,474,628	- - - - - - - - -	3186	5,474,534 – 5,474,628	-	5	94	89.79	-1.73	0.73	0.592407
1939	3R_DroMel_CAF1	5,483,544 – 5,483,656	- - - - - - - - -	3187	5,483,544 – 5,483,656	+	5	116	83.10	-1.62	0.67	0.520260
1939	3R_DroMel_CAF1	5,483,544 – 5,483,656	- - - - - - - - -	3188	5,483,544 – 5,483,656	-	5	116	83.10	-3.41	0.56	0.980468
1940	3R_DroMel_CAF1	5,484,365 – 5,484,485	- - - "knownCDS=Parent=FBtr0082100;Name=CG9492-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9492-RA" - - - - -	3189	5,484,365 – 5,484,485	-	6	120	88.94	-1.47	0.86	0.519697
1941	3R_DroMel_CAF1	5,484,565 – 5,484,765	- - - "knownCDS=Parent=FBtr0082100;Name=CG9492-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9492-RA" - - - - -	3190	5,484,565 – 5,484,685	-	6	120	92.83	-2.37	0.97	0.999796
1941	3R_DroMel_CAF1	5,484,565 – 5,484,765		3191	5,484,645 – 5,484,765	-	6	120	91.39	-2.30	0.87	0.975358
1942	3R_DroMel_CAF1	5,484,845 – 5,485,005	- - - "knownCDS=Parent=FBtr0082100;Name=CG9492-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9492-RA" - - - - -	3192	5,484,845 – 5,484,965	-	6	120	91.78	-2.61	0.91	0.998143
				3193	5,484,885 – 5,485,005	+	6	120	92.67	-3.19	0.84	0.989698
				3194	5,484,885 – 5,485,005	-	6	120	92.67	-3.09	0.99	0.999987
1943	3R_DroMel_CAF1	5,485,177 – 5,485,286	- - - - - - - - -	3195	5,485,177 – 5,485,286	-	5	120	79.18	-1.32	0.90	0.754341
1944	3R_DroMel_CAF1	5,490,983 – 5,491,088	- - - - - - - - -	3196	5,490,983 – 5,491,088	+	5	109	86.81	-2.28	0.85	0.987250
1944	3R_DroMel_CAF1	5,490,983 – 5,491,088	- - - - - - - - -	3197	5,490,983 – 5,491,088	-	5	109	86.81	-1.88	0.70	0.638655
1945	3R_DroMel_CAF1	5,492,943 – 5,493,063	- - - "knownCDS=Parent=FBtr0082100;Name=CG9492-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9492-RA" - - - - -	3198	5,492,943 – 5,493,063	+	6	120	94.39	-1.46	0.89	0.809065
1945	3R_DroMel_CAF1	5,492,943 – 5,493,063		3199	5,492,943 – 5,493,063	-	6	120	94.39	-1.17	0.93	0.824300
1946	3R_DroMel_CAF1	5,495,194 – 5,495,314	- - - - - - - - -	3200	5,495,194 – 5,495,314	-	6	120	92.89	-2.28	0.79	0.509331
1947	3R_DroMel_CAF1	5,495,554 – 5,495,662	- - - - - - - - -	3201	5,495,554 – 5,495,662	-	5	109	82.64	-2.07	0.56	0.581232
1948	3R_DroMel_CAF1	5,500,253 – 5,500,363	- - - - - - - - -	3202	5,500,253 – 5,500,363	+	5	110	98.55	-1.45	1.00	0.928858
1949	3R_DroMel_CAF1	5,500,797 – 5,500,917	- - - - - - - - -	3203	5,500,797 – 5,500,917	+	5	120	77.14	-1.43	0.02	0.662957
1950	3R_DroMel_CAF1	5,502,859 – 5,502,979	- - - "knownCDS=Parent=FBtr0082081;Name=CG8358-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8358-RA" - - - - -	3204	5,502,859 – 5,502,979	-	6	120	79.39	-1.59	0.63	0.695229
1951	3R_DroMel_CAF1	5,504,051 – 5,504,209	- - - - - - - - -	3205	5,504,051 – 5,504,169	+	5	120	89.09	-1.54	0.75	0.544025
				3206	5,504,090 – 5,504,209	+	5	120	88.80	-2.87	0.76	0.984794
				3207	5,504,090 – 5,504,209	-	5	120	88.80	-2.22	0.74	0.871790
1952	3R_DroMel_CAF1	5,505,275 – 5,505,370	- - - - - - - - -	3208	5,505,275 – 5,505,370	+	6	111	80.69	-1.38	0.87	0.726942
1953	3R_DroMel_CAF1	5,507,334 – 5,507,454	- - - "knownCDS=Parent=FBtr0082099;Name=CG9444-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9444-RA" - - - - -	3209	5,507,334 – 5,507,454	-	6	120	75.56	-1.59	0.57	0.702552
1954	3R_DroMel_CAF1	5,510,331 – 5,510,422	- - - - - - - - -	3210	5,510,331 – 5,510,422	-	6	97	81.08	-1.78	0.65	0.694758
1955	3R_DroMel_CAF1	5,519,912 – 5,520,030	- - - - - - - - -	3211	5,519,912 – 5,520,030	-	4	120	82.63	-2.01	0.72	0.875604
1956	3R_DroMel_CAF1	5,520,468 – 5,520,587	- - - - - - - - -	3212	5,520,468 – 5,520,587	+	4	120	96.22	-2.08	0.97	0.942235
1957	3R_DroMel_CAF1	5,524,565 – 5,524,655	- - - "knownCDS=Parent=FBtr0082092;Name=CG31352-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31352-RA" - - - - -	3213	5,524,565 – 5,524,655	+	6	91	80.22	-1.27	0.71	0.613509
1958	3R_DroMel_CAF1	5,529,928 – 5,530,025	- - - - - - - - -	3214	5,529,928 – 5,530,025	+	5	110	86.54	-2.00	0.67	0.630430
1958	3R_DroMel_CAF1	5,529,928 – 5,530,025	- - - - - - - - -	3215	5,529,928 – 5,530,025	-	5	110	86.54	-2.28	0.71	0.858321
1959	3R_DroMel_CAF1	5,530,419 – 5,530,524	- - - - - - - - -	3216	5,530,419 – 5,530,524	-	4	110	84.50	-1.65	0.67	0.605390
1960	3R_DroMel_CAF1	5,532,976 – 5,533,069	- - - - - - - - -	3217	5,532,976 – 5,533,069	+	6	99	82.54	-1.73	0.67	0.576396
1961	3R_DroMel_CAF1	5,534,516 – 5,534,629	- - - "knownCDS=Parent=FBtr0082091;Name=CG9448-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9448-RA" - - - - -	3218	5,534,516 – 5,534,629	-	4	113	91.15	-1.44	0.85	0.581455
1962	3R_DroMel_CAF1	5,539,320 – 5,539,422	- - - - - - - - -	3219	5,539,320 – 5,539,422	+	6	116	76.56	-1.36	0.60	0.500000
1962	3R_DroMel_CAF1	5,539,320 – 5,539,422	- - - - - - - - -	3220	5,539,320 – 5,539,422	-	6	116	76.56	-1.80	0.53	0.669820
1963	3R_DroMel_CAF1	5,539,788 – 5,539,906	- - - - - - - - -	3221	5,539,788 – 5,539,906	-	3	119	86.20	-1.70	0.81	0.537519
1964	3R_DroMel_CAF1	5,540,676 – 5,540,796	- - - "knownCDS=Parent=FBtr0082090;Name=hyd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9484-RA" - - - - -	3222	5,540,676 – 5,540,796	-	6	120	94.44	-1.88	0.86	0.884846
1965	3R_DroMel_CAF1	5,547,924 – 5,548,077	- - - "knownCDS=Parent=FBtr0082090;Name=hyd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9484-RA" - - - - -	3223	5,547,924 – 5,548,037	-	5	116	83.15	-1.82	0.67	0.651414
				3224	5,547,964 – 5,548,077	+	5	116	82.10	-1.94	0.66	0.761547
				3225	5,547,964 – 5,548,077	-	5	116	82.10	-2.10	0.66	0.850260
1966	3R_DroMel_CAF1	5,550,585 – 5,550,731	- - - - - - - - -	3226	5,550,585 – 5,550,702	+	5	120	84.05	-1.95	0.61	0.564883
1966	3R_DroMel_CAF1	5,550,585 – 5,550,731	- - - - - - - - -	3227	5,550,625 – 5,550,731	+	5	109	83.80	-3.13	0.47	0.843343
1967	3R_DroMel_CAF1	5,554,026 – 5,554,118	- - - "knownCDS=Parent=FBtr0082088;Name=CG16899-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16899-RA" - - - - -	3228	5,554,026 – 5,554,118	+	6	96	82.87	-2.01	0.74	0.734829
1968	3R_DroMel_CAF1	5,555,075 – 5,555,173	- - - "knownCDS=Parent=FBtr0082088;Name=CG16899-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16899-RA" - - - - -	3229	5,555,075 – 5,555,173	-	6	101	80.47	-1.59	0.62	0.565282
1969	3R_DroMel_CAF1	5,559,099 – 5,559,214	- - - - - - - - -	3230	5,559,099 – 5,559,214	-	5	120	79.09	-1.59	0.63	0.518462
1970	3R_DroMel_CAF1	5,559,973 – 5,560,093	- - - - - - - - -	3231	5,559,973 – 5,560,093	+	5	120	93.45	-2.04	0.83	0.974308
1971	3R_DroMel_CAF1	5,560,923 – 5,561,027	- - - "knownCDS=Parent=FBtr0082170;Name=CG12950-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12950-RA" - - - - -	3232	5,560,923 – 5,561,027	-	6	110	76.79	-1.83	0.53	0.694989
1972	3R_DroMel_CAF1	5,566,101 – 5,566,215	- - - - - - - - -	3233	5,566,101 – 5,566,215	-	4	120	85.19	-2.18	0.64	0.765200
1973	3R_DroMel_CAF1	5,570,070 – 5,570,165	- - - "knownCDS=Parent=FBtr0082127;Name=CG31415-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31415-RA" - - - - -	3234	5,570,070 – 5,570,165	-	3	95	74.74	-1.33	0.68	0.614274
1974	3R_DroMel_CAF1	5,574,693 – 5,574,810	- - - "knownCDS=Parent=FBtr0082128, FBtr0082129;Name=PpD3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8402-RA, FlyBase+Annotation+IDs:CG8402-RB" - - - - -	3235	5,574,693 – 5,574,810	-	6	117	80.40	-1.44	0.64	0.535010
1975	3R_DroMel_CAF1	5,575,418 – 5,575,538	- - - "knownCDS=Parent=FBtr0082128, FBtr0082129;Name=PpD3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8402-RA, FlyBase+Annotation+IDs:CG8402-RB" - - - - -	3236	5,575,418 – 5,575,538	+	6	120	82.83	-1.91	0.67	0.616597
1976	3R_DroMel_CAF1	5,575,975 – 5,576,067	- - - "knownCDS=Parent=FBtr0082128, FBtr0082129;Name=PpD3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8402-RA, FlyBase+Annotation+IDs:CG8402-RB" - - - - -	3237	5,575,975 – 5,576,067	-	6	106	80.92	-1.14	0.90	0.542280
1977	3R_DroMel_CAF1	5,577,041 – 5,577,161	- - - "knownCDS=Parent=FBtr0082166;Name=CG16908-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16908-RA" - - - - -	3238	5,577,041 – 5,577,161	+	6	120	77.83	-1.69	0.61	0.786438
1978	3R_DroMel_CAF1	5,590,713 – 5,590,804	- - - "knownCDS=Parent=FBtr0082133;Name=CG8478-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8478-RB" - - - - -	3239	5,590,713 – 5,590,804	+	6	92	72.70	-1.12	0.65	0.652403
1979	3R_DroMel_CAF1	5,597,790 – 5,597,887	- - - "knownCDS=Parent=FBtr0082159;Name=CG12946-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12946-RA" - - - - -	3240	5,597,790 – 5,597,887	+	6	97	86.80	-1.59	0.85	0.599151
1980	3R_DroMel_CAF1	5,598,023 – 5,598,114	- - - "knownCDS=Parent=FBtr0082159;Name=CG12946-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12946-RA" - - - - -	3241	5,598,023 – 5,598,114	-	6	97	76.92	-2.43	0.54	0.967558
1981	3R_DroMel_CAF1	5,604,275 – 5,604,383	- - - "knownCDS=Parent=FBtr0082137;Name=RpS29-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8495-RC" - - - - -	3242	5,604,275 – 5,604,383	+	6	112	75.84	-1.25	0.67	0.715890
1982	3R_DroMel_CAF1	5,604,502 – 5,604,595	- - - - - - - - -	3243	5,604,502 – 5,604,595	+	6	110	75.14	-1.58	0.64	0.875456
1983	3R_DroMel_CAF1	5,614,053 – 5,614,148	- - - - - - - - -	3244	5,614,053 – 5,614,148	+	4	95	97.54	-1.73	0.98	0.744607
1984	3R_DroMel_CAF1	5,615,526 – 5,615,635	- - - - - - - - -	3245	5,615,526 – 5,615,635	-	6	119	71.63	-2.25	0.42	0.961513
1985	3R_DroMel_CAF1	5,616,727 – 5,616,823	- - - "knownCDS=Parent=FBtr0082157;Name=CG12945-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12945-RA" - - - - -	3246	5,616,727 – 5,616,823	-	6	96	81.88	-2.74	0.85	0.959590
1986	3R_DroMel_CAF1	5,618,699 – 5,618,791	- - - - - - - - -	3247	5,618,699 – 5,618,791	+	6	98	83.98	-1.84	0.79	0.670607
1987	3R_DroMel_CAF1	5,619,067 – 5,619,162	- - - - - - - - -	3248	5,619,067 – 5,619,162	+	6	111	75.14	-2.28	0.43	0.898756
1988	3R_DroMel_CAF1	5,620,372 – 5,620,463	- - - "knownCDS=Parent=FBtr0082141;Name=CG8516-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8516-RA" - - - - -	3249	5,620,372 – 5,620,463	-	6	99	76.91	-2.35	0.70	0.982003
1989	3R_DroMel_CAF1	5,620,959 – 5,621,064	- - - "knownCDS=Parent=FBtr0082141;Name=CG8516-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8516-RA" - - - - -	3250	5,620,959 – 5,621,064	+	6	108	77.28	-1.94	0.51	0.723413
1990	3R_DroMel_CAF1	5,625,743 – 5,625,863	- - - "knownCDS=Parent=FBtr0082156;Name=CG9467-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9467-RA" - - - - -	3251	5,625,743 – 5,625,863	+	4	120	94.03	-1.74	0.84	0.677897
1991	3R_DroMel_CAF1	5,633,335 – 5,633,446	- - - "knownCDS=Parent=FBtr0082155;Name=CG9461-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9461-RA" - - - - -	3252	5,633,335 – 5,633,446	+	6	111	82.16	-1.79	0.66	0.617245
1991	3R_DroMel_CAF1	5,633,335 – 5,633,446		3253	5,633,335 – 5,633,446	-	6	111	82.16	-1.36	0.69	0.500000
1992	3R_DroMel_CAF1	5,639,102 – 5,639,261	- - - "knownCDS=Parent=FBtr0082143;Name=CG8534-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8534-RA" - - - - -	3254	5,639,102 – 5,639,222	-	5	120	91.42	-2.00	0.83	0.974936
1992	3R_DroMel_CAF1	5,639,102 – 5,639,261		3255	5,639,142 – 5,639,261	-	5	119	90.67	-1.75	0.85	0.942202
1993	3R_DroMel_CAF1	5,640,254 – 5,640,445	- - - "knownCDS=Parent=FBtr0082144;Name=CG16905-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16905-RA" - - - - -	3256	5,640,254 – 5,640,374	-	4	120	91.81	-2.27	0.86	0.951861
				3257	5,640,294 – 5,640,414	+	4	120	91.67	-2.81	0.91	0.994366
				3258	5,640,294 – 5,640,414	-	4	120	91.67	-2.69	0.92	0.993825
				3259	5,640,334 – 5,640,445	+	4	120	88.60	-1.63	0.88	0.794415
				3260	5,640,334 – 5,640,445	-	4	120	88.60	-1.39	0.81	0.530715
1994	3R_DroMel_CAF1	5,643,464 – 5,643,664	- - - "knownCDS=Parent=FBtr0082153;Name=CG9459-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9459-RA" - - - - -	3261	5,643,464 – 5,643,584	-	5	120	92.50	-1.69	0.90	0.980431
				3262	5,643,504 – 5,643,624	-	5	120	91.67	-1.56	0.89	0.936192
				3263	5,643,544 – 5,643,664	+	5	120	92.75	-1.77	0.88	0.978702
				3264	5,643,544 – 5,643,664	-	5	120	92.75	-1.49	0.84	0.810035
1995	3R_DroMel_CAF1	5,650,562 – 5,650,667	- - - - - - - - -	3265	5,650,562 – 5,650,667	-	5	107	74.74	-1.60	0.76	0.953407
1996	3R_DroMel_CAF1	5,651,221 – 5,651,350	- - - - - - - - -	3266	5,651,221 – 5,651,334	-	5	120	81.15	-2.26	0.53	0.792293
1996	3R_DroMel_CAF1	5,651,221 – 5,651,350	- - - - - - - - -	3267	5,651,255 – 5,651,350	-	5	96	78.45	-2.29	0.49	0.923807
1997	3R_DroMel_CAF1	5,657,426 – 5,657,517	- - - - - - - - -	3268	5,657,426 – 5,657,517	+	6	120	79.12	-2.07	0.57	0.819748
1997	3R_DroMel_CAF1	5,657,426 – 5,657,517	- - - - - - - - -	3269	5,657,426 – 5,657,517	-	6	120	79.12	-1.66	0.60	0.661574
1998	3R_DroMel_CAF1	5,658,941 – 5,659,047	- - - - - - - - -	3270	5,658,941 – 5,659,047	+	4	106	87.98	-1.47	0.72	0.535308
1999	3R_DroMel_CAF1	5,660,194 – 5,660,333	- - - - - - - - -	3271	5,660,194 – 5,660,293	+	5	120	70.78	-1.60	0.09	0.544549
				3272	5,660,194 – 5,660,293	-	5	120	70.78	-1.88	0.14	0.806865
				3273	5,660,231 – 5,660,333	-	4	119	76.92	-2.67	0.55	0.986719
2000	3R_DroMel_CAF1	5,676,699 – 5,676,804	- - - - - - - - -	3274	5,676,699 – 5,676,804	+	6	120	80.65	-2.11	0.71	0.883865
2000	3R_DroMel_CAF1	5,676,699 – 5,676,804	- - - - - - - - -	3275	5,676,699 – 5,676,804	-	6	120	80.65	-2.11	0.76	0.906011
2001	3R_DroMel_CAF1	5,678,294 – 5,678,426	- - - - - - - - -	3276	5,678,294 – 5,678,393	+	5	106	83.55	-3.10	0.64	0.978161
				3277	5,678,294 – 5,678,393	-	5	106	83.55	-2.38	0.62	0.832091
				3278	5,678,326 – 5,678,426	+	4	107	85.60	-2.82	0.69	0.957302
				3279	5,678,326 – 5,678,426	-	4	107	85.60	-2.39	0.63	0.785480
2002	3R_DroMel_CAF1	5,679,147 – 5,679,253	- - - - - - - - -	3280	5,679,147 – 5,679,253	+	3	107	81.25	-1.66	0.76	0.699006
2003	3R_DroMel_CAF1	5,682,658 – 5,682,755	- - - - - - - - -	3281	5,682,658 – 5,682,755	+	5	101	83.19	-1.89	0.79	0.845772
2004	3R_DroMel_CAF1	5,688,471 – 5,688,670	- - - - - - - - -	3282	5,688,471 – 5,688,564	+	6	100	80.34	-2.91	0.66	0.954699
2004	3R_DroMel_CAF1	5,688,471 – 5,688,670	- - - - - - - - -	3283	5,688,564 – 5,688,670	+	4	112	81.48	-2.60	0.60	0.941978
2005	3R_DroMel_CAF1	5,695,440 – 5,695,632	- - - - - - - - -	3284	5,695,440 – 5,695,553	+	3	120	69.23	-1.30	0.61	0.662840
2005	3R_DroMel_CAF1	5,695,440 – 5,695,632	- - - - - - - - -	3285	5,695,515 – 5,695,632	-	3	120	68.05	-1.86	0.49	0.698039
2006	3R_DroMel_CAF1	5,699,804 – 5,700,029	- - - - - - - - -	3286	5,699,804 – 5,699,918	-	3	116	93.10	-2.53	0.93	0.959581
				3287	5,699,840 – 5,699,950	-	6	120	77.09	-2.24	0.50	0.884915
				3288	5,699,878 – 5,699,989	-	4	112	97.31	-3.94	0.96	0.968389
				3289	5,699,918 – 5,700,029	-	6	120	78.91	-2.88	0.44	0.922252
2007	3R_DroMel_CAF1	5,700,526 – 5,700,635	- - - - - - - - -	3290	5,700,526 – 5,700,635	+	4	119	90.01	-1.98	0.74	0.725846
2008	3R_DroMel_CAF1	5,704,011 – 5,704,177	- - - - - - - - -	3291	5,704,011 – 5,704,113	+	5	116	82.18	-2.29	0.47	0.596126
				3292	5,704,050 – 5,704,141	-	5	105	88.65	-1.93	0.83	0.938931
				3293	5,704,082 – 5,704,177	-	5	101	93.95	-1.55	0.95	0.984749
2009	3R_DroMel_CAF1	5,704,246 – 5,704,337	- - - - - - - - -	3294	5,704,246 – 5,704,337	+	5	103	85.77	-2.28	0.72	0.888562
2010	3R_DroMel_CAF1	5,705,844 – 5,705,947	- - - - - - - - -	3295	5,705,844 – 5,705,947	+	4	114	87.10	-2.28	0.64	0.686423
2011	3R_DroMel_CAF1	5,707,612 – 5,707,722	- - - - - - - - -	3296	5,707,612 – 5,707,722	+	6	120	79.48	-2.07	0.59	0.835477
2011	3R_DroMel_CAF1	5,707,612 – 5,707,722	- - - - - - - - -	3297	5,707,612 – 5,707,722	-	6	120	79.48	-2.10	0.64	0.898688
2012	3R_DroMel_CAF1	5,709,370 – 5,709,466	- - - - - - - - -	3298	5,709,370 – 5,709,466	+	4	100	96.94	-1.88	0.94	0.815350
2013	3R_DroMel_CAF1	5,710,226 – 5,710,336	- - - - - - - - -	3299	5,710,226 – 5,710,336	+	3	120	72.65	-3.08	0.62	0.999976
2014	3R_DroMel_CAF1	5,712,913 – 5,713,010	- - - - - - - - -	3300	5,712,913 – 5,713,010	-	3	98	82.35	-1.62	0.70	0.524071
2015	3R_DroMel_CAF1	5,713,201 – 5,713,292	- - - - - - - - -	3301	5,713,201 – 5,713,292	+	4	120	76.78	-3.39	0.57	0.999466
2015	3R_DroMel_CAF1	5,713,201 – 5,713,292	- - - - - - - - -	3302	5,713,201 – 5,713,292	-	4	120	76.78	-2.65	0.66	0.997980
2016	3R_DroMel_CAF1	5,719,932 – 5,720,030	- - - - - - - - -	3303	5,719,932 – 5,720,030	+	3	98	76.53	-2.11	0.54	0.670010
2017	3R_DroMel_CAF1	5,725,041 – 5,725,156	- - - - - - - - -	3304	5,725,041 – 5,725,156	+	3	115	82.70	-2.20	0.71	0.857035
2017	3R_DroMel_CAF1	5,725,041 – 5,725,156	- - - - - - - - -	3305	5,725,041 – 5,725,156	-	3	115	82.70	-3.08	0.64	0.961947
2018	3R_DroMel_CAF1	5,730,678 – 5,730,780	- - - - - - - - -	3306	5,730,678 – 5,730,780	+	5	104	84.00	-2.22	0.95	0.989564
2018	3R_DroMel_CAF1	5,730,678 – 5,730,780	- - - - - - - - -	3307	5,730,678 – 5,730,780	-	5	104	84.00	-1.93	0.91	0.940275
2019	3R_DroMel_CAF1	5,732,094 – 5,732,195	- - - - - - - - -	3308	5,732,094 – 5,732,195	+	5	108	92.35	-1.58	0.87	0.926683
2019	3R_DroMel_CAF1	5,732,094 – 5,732,195	- - - - - - - - -	3309	5,732,094 – 5,732,195	-	5	108	92.35	-1.90	0.86	0.983461
2020	3R_DroMel_CAF1	5,734,525 – 5,734,680	- - - - - - - - -	3310	5,734,525 – 5,734,627	+	6	103	93.28	-1.34	0.88	0.622118
				3311	5,734,549 – 5,734,642	+	6	119	79.80	-1.95	0.63	0.831196
				3312	5,734,588 – 5,734,680	-	5	93	90.23	-1.29	0.83	0.500000
2021	3R_DroMel_CAF1	5,736,082 – 5,736,215	- - - - - - - - -	3313	5,736,082 – 5,736,176	+	3	94	95.04	-2.85	0.98	0.990386
				3314	5,736,082 – 5,736,176	-	3	94	95.04	-2.87	0.93	0.973807
				3315	5,736,098 – 5,736,215	+	6	120	78.78	-2.09	0.59	0.882112
				3316	5,736,098 – 5,736,215	-	6	120	78.78	-1.90	0.52	0.565515
2022	3R_DroMel_CAF1	5,737,167 – 5,737,263	- - - - - - - - -	3317	5,737,167 – 5,737,263	-	5	97	84.53	-3.12	0.70	0.987569
2023	3R_DroMel_CAF1	5,738,328 – 5,738,427	- - - - - - - - -	3318	5,738,328 – 5,738,427	+	5	108	93.33	-1.77	0.79	0.789403
2024	3R_DroMel_CAF1	5,739,071 – 5,739,164	- - - - - - - - -	3319	5,739,071 – 5,739,164	+	6	106	82.76	-1.81	0.69	0.622509
2025	3R_DroMel_CAF1	5,743,754 – 5,743,866	- - - - - - - - -	3320	5,743,754 – 5,743,866	-	6	114	85.50	-2.46	0.73	0.587252
2026	3R_DroMel_CAF1	5,745,671 – 5,745,804	- - - - - - - - -	3321	5,745,671 – 5,745,778	-	5	111	91.87	-1.36	0.88	0.779637
				3322	5,745,711 – 5,745,804	+	6	106	82.27	-3.77	0.62	0.940378
				3323	5,745,711 – 5,745,804	-	6	106	82.27	-3.21	0.59	0.880942
2027	3R_DroMel_CAF1	5,748,057 – 5,748,165	- - - - - - - - -	3324	5,748,057 – 5,748,165	-	5	111	81.41	-3.71	0.65	0.998441
2028	3R_DroMel_CAF1	5,748,798 – 5,748,906	- - - - - - - - -	3325	5,748,798 – 5,748,906	-	5	111	92.53	-1.37	0.89	0.836857
2029	3R_DroMel_CAF1	5,750,187 – 5,750,322	- - - - - - - - -	3326	5,750,187 – 5,750,284	+	5	120	84.64	-1.91	0.77	0.830018
2029	3R_DroMel_CAF1	5,750,187 – 5,750,322	- - - - - - - - -	3327	5,750,227 – 5,750,322	-	5	120	83.18	-2.99	0.74	0.993000
2030	3R_DroMel_CAF1	5,751,944 – 5,752,108	- - - - - - - - -	3328	5,751,944 – 5,752,043	+	6	118	81.55	-2.50	0.50	0.587662
				3329	5,751,982 – 5,752,072	+	5	100	95.74	-2.96	0.93	0.999941
				3330	5,751,982 – 5,752,072	-	5	100	95.74	-2.09	0.92	0.998568
				3331	5,752,018 – 5,752,108	+	3	90	91.85	-1.39	0.99	0.746051
2031	3R_DroMel_CAF1	5,756,383 – 5,756,488	- - - - - - - - -	3332	5,756,383 – 5,756,488	+	5	109	86.57	-1.71	0.74	0.633972
2032	3R_DroMel_CAF1	5,763,170 – 5,763,328	- - - - - - - - -	3333	5,763,170 – 5,763,267	-	6	104	68.48	-2.76	0.27	0.979850
2032	3R_DroMel_CAF1	5,763,170 – 5,763,328	- - - - - - - - -	3334	5,763,238 – 5,763,328	-	6	92	73.11	-3.33	0.33	0.996798
2033	3R_DroMel_CAF1	5,769,456 – 5,769,555	- - - "knownCDS=Parent=FBtr0100018;Name=CG33975-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33975-RA" - - - - -	3335	5,769,456 – 5,769,555	-	6	105	78.76	-1.33	0.67	0.639948
2034	3R_DroMel_CAF1	5,770,262 – 5,770,355	- - - - - - - - -	3336	5,770,262 – 5,770,355	+	6	102	79.78	-2.43	0.56	0.881097
2035	3R_DroMel_CAF1	5,776,961 – 5,777,066	- - - - - - - - -	3337	5,776,961 – 5,777,066	-	5	105	87.90	-1.78	0.75	0.712993
2036	3R_DroMel_CAF1	5,777,977 – 5,778,075	- - - - - - - - -	3338	5,777,977 – 5,778,075	-	4	105	92.27	-1.92	0.85	0.866058
2037	3R_DroMel_CAF1	5,785,058 – 5,785,149	- - - - - - - - -	3339	5,785,058 – 5,785,149	+	4	91	88.46	-1.55	0.86	0.710738
2037	3R_DroMel_CAF1	5,785,058 – 5,785,149	- - - - - - - - -	3340	5,785,058 – 5,785,149	-	4	91	88.46	-1.55	0.78	0.630996
2038	3R_DroMel_CAF1	5,787,701 – 5,787,799	- - - - - - - - -	3341	5,787,701 – 5,787,799	+	6	120	81.20	-1.49	0.71	0.654076
2039	3R_DroMel_CAF1	5,788,138 – 5,788,230	- - - - - - - - -	3342	5,788,138 – 5,788,230	-	6	100	78.46	-2.59	0.39	0.728862
2040	3R_DroMel_CAF1	5,791,062 – 5,791,187	- - - - - - - - -	3343	5,791,062 – 5,791,172	+	6	118	78.54	-2.33	0.83	0.966796
2040	3R_DroMel_CAF1	5,791,062 – 5,791,187	- - - - - - - - -	3344	5,791,094 – 5,791,187	+	6	95	82.88	-2.12	0.74	0.761789
2041	3R_DroMel_CAF1	5,791,320 – 5,791,424	- - - - - - - - -	3345	5,791,320 – 5,791,424	-	6	105	88.82	-1.70	0.92	0.929186
2042	3R_DroMel_CAF1	5,792,071 – 5,792,165	- - - - - - - - -	3346	5,792,071 – 5,792,165	+	3	94	81.36	-2.34	0.63	0.853323
2043	3R_DroMel_CAF1	5,794,976 – 5,795,068	- - - - - - - - -	3347	5,794,976 – 5,795,068	+	5	100	80.90	-2.34	0.59	0.913826
2043	3R_DroMel_CAF1	5,794,976 – 5,795,068	- - - - - - - - -	3348	5,794,976 – 5,795,068	-	5	100	80.90	-2.01	0.67	0.857560
2044	3R_DroMel_CAF1	5,798,531 – 5,798,629	- - - - - - - - -	3349	5,798,531 – 5,798,629	-	5	110	69.27	-2.70	0.26	0.994596
2045	3R_DroMel_CAF1	5,799,657 – 5,799,762	- - - - - - - - -	3350	5,799,657 – 5,799,762	+	5	116	91.46	-1.18	0.88	0.526832
2046	3R_DroMel_CAF1	5,806,464 – 5,806,568	- - - - - - - - -	3351	5,806,464 – 5,806,568	-	6	111	76.35	-2.14	0.43	0.703693
2047	3R_DroMel_CAF1	5,806,596 – 5,806,716	- - - - - - - - -	3352	5,806,596 – 5,806,716	+	4	120	90.83	-2.12	0.69	0.561432
2047	3R_DroMel_CAF1	5,806,596 – 5,806,716	- - - - - - - - -	3353	5,806,596 – 5,806,716	-	4	120	90.83	-1.40	0.89	0.615280
2048	3R_DroMel_CAF1	5,813,446 – 5,813,557	- - - - - - - - -	3354	5,813,446 – 5,813,557	+	6	120	79.82	-1.96	0.63	0.832975
2049	3R_DroMel_CAF1	5,813,682 – 5,813,792	- - - - - - - - -	3355	5,813,682 – 5,813,792	+	6	119	80.26	-2.21	0.53	0.691154
2050	3R_DroMel_CAF1	5,814,824 – 5,814,936	- - - - - - - - -	3356	5,814,824 – 5,814,936	+	5	116	86.62	-4.31	0.76	0.998582
2050	3R_DroMel_CAF1	5,814,824 – 5,814,936	- - - - - - - - -	3357	5,814,824 – 5,814,936	-	5	116	86.62	-3.47	0.70	0.984494
2051	3R_DroMel_CAF1	5,817,542 – 5,817,638	- - - - - - - - -	3358	5,817,542 – 5,817,638	+	6	103	73.52	-1.66	0.54	0.733270
2052	3R_DroMel_CAF1	5,817,724 – 5,817,851	- - - - - - - - -	3359	5,817,724 – 5,817,822	+	4	105	73.23	-2.12	0.67	0.992778
				3360	5,817,724 – 5,817,822	-	4	105	73.23	-2.64	0.53	0.994785
				3361	5,817,755 – 5,817,851	-	4	103	77.39	-2.22	0.75	0.988661
2053	3R_DroMel_CAF1	5,822,380 – 5,822,500	- - - "knownCDS=Parent=FBtr0082216;Name=Gr85a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31405-RA" - - - - -	3362	5,822,380 – 5,822,500	+	5	120	86.92	-1.69	0.81	0.767526
2054	3R_DroMel_CAF1	5,828,852 – 5,828,972	- - - "knownCDS=Parent=FBtr0082208, FBtr0082209, FBtr0082211, FBtr0082212, FBtr0082213;Name=MICAL-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33208-RE, FlyBase+Annotation+IDs:CG33208-RF, FlyBase+Annotation+IDs:CG33208-RH, FlyBase+Annotation+IDs:CG33208-RG, FlyBase+Annotation+IDs:CG33208-RD" - - - - -	3363	5,828,852 – 5,828,972	+	6	120	95.28	-1.75	0.94	0.993778
2055	3R_DroMel_CAF1	5,839,690 – 5,839,799	- - - "knownCDS=Parent=FBtr0082209, FBtr0082211, FBtr0082212, FBtr0082213;Name=MICAL-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33208-RF, FlyBase+Annotation+IDs:CG33208-RH, FlyBase+Annotation+IDs:CG33208-RG, FlyBase+Annotation+IDs:CG33208-RD" - - - - -	3364	5,839,690 – 5,839,799	+	3	120	66.57	-1.37	0.55	0.575339
2056	3R_DroMel_CAF1	5,840,635 – 5,840,746	- - - - - - - - -	3365	5,840,635 – 5,840,746	-	3	111	85.17	-1.34	0.91	0.741666
2057	3R_DroMel_CAF1	5,842,811 – 5,842,921	- - - - - - - - -	3366	5,842,811 – 5,842,921	+	4	110	88.03	-2.01	0.67	0.645698
2058	3R_DroMel_CAF1	5,848,517 – 5,848,613	- - - - - - - - -	3367	5,848,517 – 5,848,613	-	5	105	78.91	-2.17	0.77	0.974113
2059	3R_DroMel_CAF1	5,853,313 – 5,853,406	- - - - - - - - -	3368	5,853,313 – 5,853,406	+	6	100	90.21	-2.05	0.84	0.778279
2060	3R_DroMel_CAF1	5,856,730 – 5,856,822	- - - - - - - - -	3369	5,856,730 – 5,856,822	-	6	97	76.28	-2.37	0.34	0.629227
2061	3R_DroMel_CAF1	5,859,879 – 5,859,975	- - - - - - - - -	3370	5,859,879 – 5,859,975	+	3	106	79.55	-2.03	0.58	0.572968
2062	3R_DroMel_CAF1	5,869,756 – 5,869,871	- - - "knownCDS=Parent=FBtr0082172;Name=CG3909-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3909-RA" - - - - -	3371	5,869,756 – 5,869,871	+	6	117	76.86	-1.56	0.57	0.598286
2063	3R_DroMel_CAF1	5,870,831 – 5,870,947	- - - "knownCDS=Parent=FBtr0082205;Name=CG11722-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11722-RA" - - - - -	3372	5,870,831 – 5,870,947	+	6	120	77.80	-1.79	0.54	0.640545
2064	3R_DroMel_CAF1	5,874,452 – 5,874,563	- - - - - - - - -	3373	5,874,452 – 5,874,563	-	3	111	94.58	-1.95	0.98	0.914960
2065	3R_DroMel_CAF1	5,875,586 – 5,875,690	- - - "knownCDS=Parent=FBtr0082174;Name=CG3925-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3925-RA" - - - - -	3374	5,875,586 – 5,875,690	+	6	117	76.61	-1.72	0.52	0.550199
2066	3R_DroMel_CAF1	5,876,743 – 5,876,863	- - - "knownCDS=Parent=FBtr0082174;Name=CG3925-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3925-RA" - - - - -	3375	5,876,743 – 5,876,863	+	6	120	80.56	-1.33	0.67	0.542089
2067	3R_DroMel_CAF1	5,881,808 – 5,881,905	- - - - - - - - -	3376	5,881,808 – 5,881,905	+	6	100	81.43	-1.26	0.72	0.536977
2068	3R_DroMel_CAF1	5,882,776 – 5,882,869	- - - - - - - - -	3377	5,882,776 – 5,882,869	+	6	107	82.86	-2.55	0.72	0.825900
2069	3R_DroMel_CAF1	5,885,361 – 5,885,460	- - - - - - - - -	3378	5,885,361 – 5,885,460	+	6	110	78.57	-2.16	0.56	0.874960
2070	3R_DroMel_CAF1	5,889,728 – 5,889,844	- - - "knownCDS=Parent=FBtr0091608;Name=CG33631-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33631-RA" - - - - -	3379	5,889,728 – 5,889,844	+	4	116	88.65	-1.37	0.84	0.535099
2071	3R_DroMel_CAF1	5,890,607 – 5,890,720	- - - - - - - - -	3380	5,890,607 – 5,890,720	+	4	120	88.56	-2.15	0.68	0.689766
2071	3R_DroMel_CAF1	5,890,607 – 5,890,720	- - - - - - - - -	3381	5,890,607 – 5,890,720	-	4	120	88.56	-1.56	0.77	0.628920
2072	3R_DroMel_CAF1	5,890,911 – 5,891,068	- - - - - - - - -	3382	5,890,911 – 5,891,028	+	4	120	93.80	-1.71	0.82	0.599758
2072	3R_DroMel_CAF1	5,890,911 – 5,891,068	- - - - - - - - -	3383	5,890,951 – 5,891,068	+	4	120	94.65	-2.00	0.85	0.820383
2073	3R_DroMel_CAF1	5,894,651 – 5,894,761	- - - - - - - - -	3384	5,894,651 – 5,894,761	+	4	120	86.35	-1.66	0.70	0.640482
2074	3R_DroMel_CAF1	5,895,833 – 5,896,091	- - - - - - - - -	3385	5,895,833 – 5,895,932	+	3	110	73.72	-1.84	0.74	0.994436
				3386	5,895,833 – 5,895,932	-	3	110	73.72	-1.93	0.73	0.996131
				3387	5,895,870 – 5,895,972	+	3	110	87.65	-2.20	0.88	0.886257
				3388	5,895,870 – 5,895,972	-	3	110	87.65	-3.00	0.84	0.955106
				3389	5,895,972 – 5,896,091	+	3	120	95.54	-2.54	0.91	0.922603
2075	3R_DroMel_CAF1	5,900,501 – 5,900,600	- - - "knownCDS=Parent=FBtr0082201;Name=CG5361-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5361-RA" - - - - -	3390	5,900,501 – 5,900,600	-	6	99	80.13	-1.83	0.62	0.736776
2076	3R_DroMel_CAF1	5,903,596 – 5,903,689	- - - - - - - - -	3391	5,903,596 – 5,903,689	-	6	106	81.03	-1.66	0.63	0.594590
2077	3R_DroMel_CAF1	5,907,408 – 5,907,574	- - - - - - - - -	3392	5,907,408 – 5,907,502	+	4	100	89.52	-1.82	0.74	0.687200
2077	3R_DroMel_CAF1	5,907,408 – 5,907,574	- - - - - - - - -	3393	5,907,469 – 5,907,574	+	4	107	90.00	-2.59	0.77	0.931226
2078	3R_DroMel_CAF1	5,914,300 – 5,914,404	- - - - - - - - -	3394	5,914,300 – 5,914,404	-	4	106	84.22	-2.36	0.63	0.842599
2079	3R_DroMel_CAF1	5,916,833 – 5,916,935	"known=stem_loop ID=Dmel\CG_RFAM_MIR_48002323;Name=dme-mir-317" - "RNAmicro=f:5916833_t:5916952_strand:-_p:0.737815" - - - "miRBase=dme-mir-317\|7e-46" - "Flybase=FBgn0067687:mir-317:microRNA_encoding_gene\|4e-08"	3395	5,916,833 – 5,916,935	+	6	120	78.16	-2.66	0.89	0.974590
2079	3R_DroMel_CAF1	5,916,833 – 5,916,935		3396	5,916,833 – 5,916,935	-	6	120	78.16	-2.84	0.87	0.975162
2080	3R_DroMel_CAF1	5,919,058 – 5,919,149	- - - - - - - - -	3397	5,919,058 – 5,919,149	-	6	96	80.32	-1.19	0.75	0.601100
2081	3R_DroMel_CAF1	5,925,730 – 5,925,864	"known=stem_loop ID=Dmel\CG_RFAM_MIR_48002325;Name=dme-mir-277" - "RNAmicro=f:5925730_t:5925848_strand:+_p:0.999702" - - - "miRBase=dme-mir-277\|7e-53" - "Flybase=FBgn0067715:mir-277:microRNA_encoding_gene\|2e-07"	3398	5,925,730 – 5,925,834	+	6	119	85.61	-3.70	0.98	0.999382
2081	3R_DroMel_CAF1	5,925,730 – 5,925,864		3399	5,925,756 – 5,925,864	+	6	120	89.05	-2.20	0.89	0.970698
2082	3R_DroMel_CAF1	5,926,637 – 5,926,772	"known=stem_loop ID=Dmel\CG_RFAM_MIR_48002327;Name=dme-mir-34" - "RNAmicro=f:5926662_t:5926780_strand:+_p:0.892306" - - - "miRBase=dme-mir-34\|3e-52" - "Flybase=FBgn0064158:mir-34:microRNA_encoding_gene\|3e-53"	3400	5,926,637 – 5,926,733	+	6	102	78.93	-1.00	0.80	0.608456
				3401	5,926,637 – 5,926,733	-	6	102	78.93	-1.42	0.69	0.739879
				3402	5,926,662 – 5,926,772	+	6	119	80.86	-2.90	0.95	0.986232
				3403	5,926,662 – 5,926,772	-	6	119	80.86	-1.27	0.83	0.636302
2083	3R_DroMel_CAF1	5,930,235 – 5,930,334	- - - "knownCDS=Parent=FBtr0082200;Name=Fmr1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6203-RE" - - - - -	3404	5,930,235 – 5,930,334	-	4	99	84.51	-1.77	0.71	0.722840
2084	3R_DroMel_CAF1	5,935,646 – 5,935,737	- - - - - - - - -	3405	5,935,646 – 5,935,737	+	6	93	81.00	-1.74	0.64	0.677848
2084	3R_DroMel_CAF1	5,935,646 – 5,935,737	- - - - - - - - -	3406	5,935,646 – 5,935,737	-	6	93	81.00	-1.55	0.62	0.500000
2085	3R_DroMel_CAF1	5,936,866 – 5,936,965	- - - - - - - - -	3407	5,936,866 – 5,936,965	+	6	99	84.72	-1.80	0.75	0.512496
2086	3R_DroMel_CAF1	5,939,481 – 5,939,581	- - - - - - - - -	3408	5,939,481 – 5,939,581	+	6	103	69.49	-2.42	0.21	0.761351
2086	3R_DroMel_CAF1	5,939,481 – 5,939,581	- - - - - - - - -	3409	5,939,481 – 5,939,581	-	6	103	69.49	-2.65	0.17	0.787384
2087	3R_DroMel_CAF1	5,940,721 – 5,940,820	- - - - - - - - -	3410	5,940,721 – 5,940,820	+	6	119	71.16	-2.44	0.40	0.981586
2087	3R_DroMel_CAF1	5,940,721 – 5,940,820	- - - - - - - - -	3411	5,940,721 – 5,940,820	-	6	119	71.16	-2.17	0.31	0.773841
2088	3R_DroMel_CAF1	5,946,733 – 5,946,933	- - - "knownCDS=Parent=FBtr0082195;Name=CG6208-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6208-RA" - - - - -	3412	5,946,733 – 5,946,853	+	5	120	92.50	-1.67	0.86	0.938570
				3413	5,946,733 – 5,946,853	-	5	120	92.50	-1.59	0.84	0.863216
				3414	5,946,773 – 5,946,893	+	5	120	94.50	-1.77	0.91	0.991102
				3415	5,946,773 – 5,946,893	-	5	120	94.50	-2.27	0.86	0.995173
				3416	5,946,813 – 5,946,933	+	5	120	96.00	-1.20	0.94	0.742679
				3417	5,946,813 – 5,946,933	-	5	120	96.00	-1.80	0.88	0.972291
2089	3R_DroMel_CAF1	5,947,706 – 5,947,821	- - - - - - - - -	3418	5,947,706 – 5,947,821	+	5	120	89.32	-1.37	0.82	0.552995
2090	3R_DroMel_CAF1	5,955,278 – 5,955,376	- - - "knownCDS=Parent=FBtr0082186, FBtr0082187, FBtr0082188, FBtr0082189, FBtr0082190, FBtr0082191, FBtr0082192, FBtr0082193;Name=tws-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6235-RA, FlyBase+Annotation+IDs:CG6235-RF, FlyBase+Annotation+IDs:CG6235-RB, FlyBase+Annotation+IDs:CG6235-RD, FlyBase+Annotation+IDs:CG6235-RE, FlyBase+Annotation+IDs:CG6235-RC, FlyBase+Annotation+IDs:CG6235-RG, FlyBase+Annotation+IDs:CG6235-RH" - - - - -	3419	5,955,278 – 5,955,376	-	6	120	81.55	-1.29	0.74	0.563619
2091	3R_DroMel_CAF1	5,963,640 – 5,963,742	- - - - - - - - -	3420	5,963,640 – 5,963,742	-	5	109	70.95	-1.81	0.57	0.906692
2092	3R_DroMel_CAF1	5,965,528 – 5,965,650	- - - - - - - - -	3421	5,965,528 – 5,965,621	+	5	94	78.92	-2.23	0.70	0.970684
2092	3R_DroMel_CAF1	5,965,528 – 5,965,650	- - - - - - - - -	3422	5,965,545 – 5,965,650	+	5	117	68.05	-2.14	0.47	0.973640
2093	3R_DroMel_CAF1	5,970,605 – 5,970,794	- - - - - - - - -	3423	5,970,605 – 5,970,725	+	5	120	95.91	-1.34	0.88	0.711316
				3424	5,970,645 – 5,970,762	+	5	120	90.13	-1.95	0.82	0.946568
				3425	5,970,685 – 5,970,794	+	5	120	87.32	-1.70	0.78	0.715157
2094	3R_DroMel_CAF1	5,971,952 – 5,972,045	- - - - - - - - -	3426	5,971,952 – 5,972,045	+	5	94	84.62	-1.84	0.67	0.622584
2095	3R_DroMel_CAF1	5,972,388 – 5,972,478	- - - - - - - - -	3427	5,972,388 – 5,972,478	+	5	111	72.04	-1.62	0.18	0.611358
2096	3R_DroMel_CAF1	5,972,624 – 5,972,716	- - - - - - - - -	3428	5,972,624 – 5,972,716	+	6	101	82.62	-1.58	0.68	0.537167
2097	3R_DroMel_CAF1	5,975,161 – 5,975,254	- - - - - - - - -	3429	5,975,161 – 5,975,254	-	5	93	95.27	-1.56	0.86	0.866360
2098	3R_DroMel_CAF1	5,978,373 – 5,978,504	- - - - - - - - -	3430	5,978,373 – 5,978,466	+	6	109	79.13	-2.32	0.62	0.934794
				3431	5,978,373 – 5,978,466	-	6	109	79.13	-2.50	0.73	0.964012
				3432	5,978,402 – 5,978,504	-	6	120	77.04	-1.95	0.54	0.825898
2099	3R_DroMel_CAF1	5,983,192 – 5,983,294	- - - "knownCDS=Parent=FBtr0082181;Name=l(3)IX-14-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3953-RA" - - - - -	3433	5,983,192 – 5,983,294	-	6	108	79.29	-1.35	0.72	0.732562
2100	3R_DroMel_CAF1	5,986,360 – 5,986,466	- - - "knownCDS=Parent=FBtr0082184;Name=CG6254-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6254-RA" - - - - -	3434	5,986,360 – 5,986,466	+	4	106	90.09	-2.19	0.81	0.915586
2100	3R_DroMel_CAF1	5,986,360 – 5,986,466		3435	5,986,360 – 5,986,466	-	4	106	90.09	-1.76	0.70	0.536360
2101	3R_DroMel_CAF1	5,986,985 – 5,987,092	- - - - - - - - -	3436	5,986,985 – 5,987,092	+	6	115	80.61	-2.27	0.54	0.704179
2102	3R_DroMel_CAF1	5,987,709 – 5,987,902	- - - "knownCDS=Parent=FBtr0082183;Name=Best1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6264-RA" - - - - -	3437	5,987,709 – 5,987,806	-	6	115	83.17	-2.11	0.75	0.758312
2102	3R_DroMel_CAF1	5,987,709 – 5,987,902		3438	5,987,806 – 5,987,902	+	6	96	86.39	-2.01	0.86	0.837244
2103	3R_DroMel_CAF1	5,998,192 – 5,998,299	- - - - - - - - -	3439	5,998,192 – 5,998,299	+	4	112	68.77	-2.14	0.60	0.996636
2103	3R_DroMel_CAF1	5,998,192 – 5,998,299	- - - - - - - - -	3440	5,998,192 – 5,998,299	-	4	112	68.77	-2.86	0.70	0.999959
2104	3R_DroMel_CAF1	6,002,536 – 6,002,627	- - - - - - - - -	3441	6,002,536 – 6,002,627	+	6	116	75.08	-1.58	0.54	0.562198
2105	3R_DroMel_CAF1	6,002,966 – 6,003,070	- - - - - - - - -	3442	6,002,966 – 6,003,070	+	3	119	72.51	-2.32	0.68	0.999687
2106	3R_DroMel_CAF1	6,003,797 – 6,003,888	- - - - - - - - -	3443	6,003,797 – 6,003,888	+	6	96	80.62	-1.36	0.64	0.500000
2107	3R_DroMel_CAF1	6,009,805 – 6,009,962	- - - - - - - - -	3444	6,009,805 – 6,009,897	-	6	103	83.62	-1.74	0.70	0.520484
2107	3R_DroMel_CAF1	6,009,805 – 6,009,962	- - - - - - - - -	3445	6,009,864 – 6,009,962	+	6	113	69.60	-1.99	0.44	0.920272
2108	3R_DroMel_CAF1	6,018,699 – 6,018,808	- - - - - - - - -	3446	6,018,699 – 6,018,808	+	6	115	84.14	-1.91	0.71	0.525030
2108	3R_DroMel_CAF1	6,018,699 – 6,018,808	- - - - - - - - -	3447	6,018,699 – 6,018,808	-	6	115	84.14	-1.71	0.77	0.569666
2109	3R_DroMel_CAF1	6,019,673 – 6,019,774	- - - - - - - - -	3448	6,019,673 – 6,019,774	+	6	115	77.26	-0.75	0.80	0.542775
2110	3R_DroMel_CAF1	6,021,553 – 6,021,698	- - - "knownCDS=Parent=FBtr0089476;Name=Syn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3985-RC" - - - - -	3449	6,021,553 – 6,021,658	+	6	117	75.46	-1.87	0.56	0.880736
				3450	6,021,553 – 6,021,658	-	6	117	75.46	-1.51	0.59	0.694087
				3451	6,021,583 – 6,021,698	+	6	117	78.67	-1.82	0.62	0.830788
2111	3R_DroMel_CAF1	6,029,010 – 6,029,105	- - - - - - - - -	3452	6,029,010 – 6,029,105	-	6	103	80.89	-1.70	0.59	0.511919
2112	3R_DroMel_CAF1	6,031,473 – 6,031,576	- - - - - - - - -	3453	6,031,473 – 6,031,576	-	6	110	76.57	-1.43	0.61	0.627014
2113	3R_DroMel_CAF1	6,032,903 – 6,033,038	- - - - - - - - -	3454	6,032,903 – 6,033,013	-	5	112	78.92	-1.85	0.55	0.623106
2113	3R_DroMel_CAF1	6,032,903 – 6,033,038	- - - - - - - - -	3455	6,032,938 – 6,033,038	-	6	105	76.92	-2.48	0.58	0.978744
2114	3R_DroMel_CAF1	6,036,714 – 6,036,827	- - - - - - - - -	3456	6,036,714 – 6,036,827	-	5	113	94.13	-1.97	0.90	0.995889
2115	3R_DroMel_CAF1	6,041,021 – 6,041,118	- - - - - - - - -	3457	6,041,021 – 6,041,118	-	4	107	78.41	-1.69	0.72	0.758954
2116	3R_DroMel_CAF1	6,042,135 – 6,042,235	- - - - - - - - -	3458	6,042,135 – 6,042,235	+	6	103	83.09	-2.61	0.69	0.782316
2117	3R_DroMel_CAF1	6,043,872 – 6,043,977	- - - "knownCDS=Parent=FBtr0089475;Name=Syn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3985-RF" - - - - -	3459	6,043,872 – 6,043,977	-	6	109	76.29	-1.57	0.65	0.863243
2118	3R_DroMel_CAF1	6,048,533 – 6,048,794	- - - "knownCDS=Parent=FBtr0082222;Name=CG12420-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12420-RA" - - - - -	3460	6,048,533 – 6,048,632	-	6	99	78.59	-1.90	0.52	0.595347
				3461	6,048,598 – 6,048,695	-	6	103	76.87	-1.62	0.57	0.645231
				3462	6,048,695 – 6,048,794	+	6	110	82.68	-1.49	0.74	0.570607
2119	3R_DroMel_CAF1	6,053,158 – 6,053,281	- - - - - - - - -	3463	6,053,158 – 6,053,263	+	6	120	72.50	-2.09	0.61	0.984249
				3464	6,053,189 – 6,053,281	+	6	100	78.98	-2.07	0.67	0.927689
				3465	6,053,189 – 6,053,281	-	6	100	78.98	-2.32	0.44	0.625152
2120	3R_DroMel_CAF1	6,063,234 – 6,063,330	- - - - - - - - -	3466	6,063,234 – 6,063,330	+	6	106	76.53	-2.19	0.62	0.968445
2121	3R_DroMel_CAF1	6,065,501 – 6,065,592	- - - "knownCDS=Parent=FBtr0082224;Name=CG3996-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3996-RA" - - - - -	3467	6,065,501 – 6,065,592	-	6	106	72.43	-1.65	0.46	0.500000
2122	3R_DroMel_CAF1	6,068,228 – 6,068,342	- - "RNAmicro=f:6068228_t:6068344_strand:+_p:0.721442" "knownCDS=Parent=FBtr0082224;Name=CG3996-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3996-RA" - - - - -	3468	6,068,228 – 6,068,342	-	6	117	76.40	-1.51	0.59	0.644202
2123	3R_DroMel_CAF1	6,069,817 – 6,069,922	- - - "knownCDS=Parent=FBtr0082224;Name=CG3996-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3996-RA" - - - - -	3469	6,069,817 – 6,069,922	+	5	105	82.07	-2.80	0.30	0.783643
2124	3R_DroMel_CAF1	6,071,009 – 6,071,108	- - - "knownCDS=Parent=FBtr0082224;Name=CG3996-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3996-RA" - - - - -	3470	6,071,009 – 6,071,108	-	6	102	81.33	-2.04	0.61	0.690191
2125	3R_DroMel_CAF1	6,071,220 – 6,071,329	- - - "knownCDS=Parent=FBtr0082224;Name=CG3996-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3996-RA" - - - - -	3471	6,071,220 – 6,071,329	-	6	116	79.56	-1.74	0.59	0.647313
2126	3R_DroMel_CAF1	6,080,656 – 6,080,746	- - - - - - - - -	3472	6,080,656 – 6,080,746	+	6	92	82.57	-2.02	0.84	0.872357
2126	3R_DroMel_CAF1	6,080,656 – 6,080,746	- - - - - - - - -	3473	6,080,656 – 6,080,746	-	6	92	82.57	-1.87	0.78	0.766828
2127	3R_DroMel_CAF1	6,091,041 – 6,091,162	- - - - - - - - -	3474	6,091,041 – 6,091,133	+	6	95	79.93	-2.21	0.52	0.692039
				3475	6,091,041 – 6,091,133	-	6	95	79.93	-2.38	0.55	0.851918
				3476	6,091,060 – 6,091,162	+	5	105	93.30	-1.92	0.84	0.974673
2128	3R_DroMel_CAF1	6,091,236 – 6,091,326	- - - - - - - - -	3477	6,091,236 – 6,091,326	-	3	107	65.92	-1.51	0.54	0.745031
2129	3R_DroMel_CAF1	6,093,298 – 6,093,415	- - - - - - - - -	3478	6,093,298 – 6,093,415	-	4	120	85.43	-1.46	0.91	0.701539
2130	3R_DroMel_CAF1	6,093,976 – 6,094,070	- - - - - - - - -	3479	6,093,976 – 6,094,070	+	6	105	76.45	-1.92	0.60	0.914444
2131	3R_DroMel_CAF1	6,095,363 – 6,095,466	- - - - - - - - -	3480	6,095,363 – 6,095,466	+	4	105	90.51	-2.26	0.88	0.971757
2132	3R_DroMel_CAF1	6,098,449 – 6,098,544	- - - - - - - - -	3481	6,098,449 – 6,098,544	+	6	97	81.36	-1.38	0.70	0.589523
2132	3R_DroMel_CAF1	6,098,449 – 6,098,544	- - - - - - - - -	3482	6,098,449 – 6,098,544	-	6	97	81.36	-1.38	0.72	0.613736
2133	3R_DroMel_CAF1	6,099,669 – 6,099,770	- - - - - - - - -	3483	6,099,669 – 6,099,770	+	5	101	89.55	-2.62	0.82	0.995864
2134	3R_DroMel_CAF1	6,102,055 – 6,102,155	- - - - - - - - -	3484	6,102,055 – 6,102,155	+	6	100	82.73	-1.91	0.64	0.558595
2135	3R_DroMel_CAF1	6,102,970 – 6,103,117	- - - - - - - - -	3485	6,102,970 – 6,103,083	+	6	117	77.49	-2.98	0.65	0.990041
2135	3R_DroMel_CAF1	6,102,970 – 6,103,117	- - - - - - - - -	3486	6,103,006 – 6,103,117	+	5	111	96.58	-3.01	0.92	0.999888
2136	3R_DroMel_CAF1	6,103,124 – 6,103,216	- - - - - - - - -	3487	6,103,124 – 6,103,216	+	6	92	84.01	-3.75	0.78	0.952518
2137	3R_DroMel_CAF1	6,103,762 – 6,103,859	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000211;Name=Dmel_Ser_GCT_14000211;TFAMID=DmelSGCT-6103857" "tRNAscan=type:Ser:anticodon:GCT f:6103775_t:6103869_strand=-_cove=82.84" - - "Rfam=AC106019.4/24546-24627_RF00005;tRNA;\|1e-33" - - "ncRNAdb=MmuscAK082357_unclassifiable\|2e-33" "Flybase=FBgn0011970:transfer_RNA:ser2b:86A:cytosolic_tRNA_gene\|1e-42"	3488	6,103,762 – 6,103,859	+	6	120	84.01	-1.70	0.97	0.934001
2137	3R_DroMel_CAF1	6,103,762 – 6,103,859		3489	6,103,762 – 6,103,859	-	6	120	84.01	-1.59	0.99	0.927761
2138	3R_DroMel_CAF1	6,109,546 – 6,109,640	- - - - - - - - -	3490	6,109,546 – 6,109,640	+	5	109	76.16	-1.80	0.30	0.636650
2139	3R_DroMel_CAF1	6,111,554 – 6,111,652	- - - - - - - - -	3491	6,111,554 – 6,111,652	-	4	102	84.11	-1.84	0.61	0.533615
2140	3R_DroMel_CAF1	6,113,712 – 6,113,806	- - - - - - - - -	3492	6,113,712 – 6,113,806	+	5	96	92.14	-1.41	0.94	0.940194
2141	3R_DroMel_CAF1	6,115,529 – 6,115,630	- - - - - - - - -	3493	6,115,529 – 6,115,630	-	5	101	88.46	-1.89	0.93	0.987828
2142	3R_DroMel_CAF1	6,117,308 – 6,117,428	- - - "knownCDS=Parent=FBtr0090032;Name=CG11870-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11870-RC" - - - - -	3494	6,117,308 – 6,117,428	+	6	120	87.33	-1.95	0.85	0.782071
2143	3R_DroMel_CAF1	6,118,142 – 6,118,262	- - - "knownCDS=Parent=FBtr0090032;Name=CG11870-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11870-RC" - - - - -	3495	6,118,142 – 6,118,262	+	6	120	82.89	-1.56	0.68	0.500000
2144	3R_DroMel_CAF1	6,118,557 – 6,118,658	- - - - - - - - -	3496	6,118,557 – 6,118,658	-	4	117	80.73	-1.93	0.63	0.755175
2145	3R_DroMel_CAF1	6,120,438 – 6,120,535	- - - - - - - - -	3497	6,120,438 – 6,120,535	-	6	105	76.45	-2.32	0.58	0.972152
2146	3R_DroMel_CAF1	6,125,069 – 6,125,170	- - - - - - - - -	3498	6,125,069 – 6,125,170	+	6	105	82.48	-2.36	0.69	0.794785
2147	3R_DroMel_CAF1	6,129,715 – 6,129,889	- - - "knownCDS=Parent=FBtr0082229;Name=CG11872-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11872-RA" - - - - -	3499	6,129,715 – 6,129,815	-	6	105	78.75	-1.50	0.60	0.531247
2147	3R_DroMel_CAF1	6,129,715 – 6,129,889		3500	6,129,777 – 6,129,889	-	6	118	78.01	-1.41	0.65	0.684768
2148	3R_DroMel_CAF1	6,132,931 – 6,133,036	- - - "knownCDS=Parent=FBtr0082229;Name=CG11872-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11872-RA" - - - - -	3501	6,132,931 – 6,133,036	+	6	111	76.57	-2.34	0.36	0.640170
2149	3R_DroMel_CAF1	6,156,262 – 6,156,355	- - - - - - - - -	3502	6,156,262 – 6,156,355	-	5	111	67.54	-1.92	0.24	0.511417
2150	3R_DroMel_CAF1	6,159,998 – 6,160,114	- - - "knownCDS=Parent=FBtr0082231, FBtr0082232;Name=sle-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12819-RB, FlyBase+Annotation+IDs:CG12819-RA" - - - - -	3503	6,159,998 – 6,160,114	+	5	116	90.17	-1.89	0.75	0.736739
2151	3R_DroMel_CAF1	6,160,334 – 6,160,453	- - - "knownCDS=Parent=FBtr0082231, FBtr0082232;Name=sle-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12819-RB, FlyBase+Annotation+IDs:CG12819-RA" - - - - -	3504	6,160,334 – 6,160,453	-	5	120	84.76	-1.73	0.66	0.516152
2152	3R_DroMel_CAF1	6,161,278 – 6,161,383	- - - "knownCDS=Parent=FBtr0082231, FBtr0082232;Name=sle-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12819-RB, FlyBase+Annotation+IDs:CG12819-RA" - - - - -	3505	6,161,278 – 6,161,383	-	6	111	82.18	-1.66	0.67	0.581988
2153	3R_DroMel_CAF1	6,162,109 – 6,162,208	- - - "knownCDS=Parent=FBtr0082231, FBtr0082232;Name=sle-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12819-RB, FlyBase+Annotation+IDs:CG12819-RA" - - - - -	3506	6,162,109 – 6,162,208	-	4	99	86.87	-1.88	0.63	0.530976
2154	3R_DroMel_CAF1	6,166,185 – 6,166,276	- - - "knownCDS=Parent=FBtr0082233;Name=CG12592-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12592-RA" - - - - -	3507	6,166,185 – 6,166,276	-	6	120	75.23	-1.23	0.69	0.783583
2155	3R_DroMel_CAF1	6,176,512 – 6,176,603	- - - - - - - - -	3508	6,176,512 – 6,176,603	-	5	91	98.35	-1.38	0.92	0.733789
2156	3R_DroMel_CAF1	6,177,826 – 6,178,037	- - - - - - - - -	3509	6,177,826 – 6,177,945	+	5	120	96.49	-1.59	0.86	0.853215
				3510	6,177,826 – 6,177,945	-	5	120	96.49	-2.03	0.84	0.946222
				3511	6,177,865 – 6,177,969	+	5	120	88.31	-1.88	0.77	0.814150
				3512	6,177,945 – 6,178,037	+	5	108	86.16	-1.68	0.85	0.801849
2157	3R_DroMel_CAF1	6,178,108 – 6,178,198	- - - - - - - - -	3513	6,178,108 – 6,178,198	-	4	107	82.23	-1.78	0.80	0.810279
2158	3R_DroMel_CAF1	6,190,163 – 6,190,261	- - - - - - - - -	3514	6,190,163 – 6,190,261	-	6	98	78.22	-2.02	0.66	0.933493
2159	3R_DroMel_CAF1	6,191,618 – 6,191,716	- - - "knownCDS=Parent=FBtr0082238;Name=Rfx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6312-RA" - - - - -	3515	6,191,618 – 6,191,716	-	6	107	78.13	-1.91	0.60	0.865821
2160	3R_DroMel_CAF1	6,194,713 – 6,194,818	- - - - - - - - -	3516	6,194,713 – 6,194,818	+	4	105	84.91	-1.85	0.64	0.626708
2161	3R_DroMel_CAF1	6,202,572 – 6,202,730	- - - - - - - - -	3517	6,202,572 – 6,202,664	-	6	103	75.65	-1.47	0.59	0.621767
				3518	6,202,601 – 6,202,704	-	4	114	71.10	-1.64	0.64	0.908608
				3519	6,202,635 – 6,202,730	-	3	95	93.68	-2.52	0.96	0.974413
2162	3R_DroMel_CAF1	6,205,760 – 6,205,869	- - - - - - - - -	3520	6,205,760 – 6,205,869	+	5	111	80.95	-2.20	0.41	0.571272
2163	3R_DroMel_CAF1	6,211,827 – 6,211,924	- - - - - - - - -	3521	6,211,827 – 6,211,924	+	6	116	81.55	-1.44	0.76	0.659277
2164	3R_DroMel_CAF1	6,212,417 – 6,212,522	- - - - - - - - -	3522	6,212,417 – 6,212,522	+	5	106	77.04	-1.33	0.76	0.734100
2164	3R_DroMel_CAF1	6,212,417 – 6,212,522	- - - - - - - - -	3523	6,212,417 – 6,212,522	-	5	106	77.04	-0.99	0.78	0.508932
2165	3R_DroMel_CAF1	6,215,605 – 6,215,700	- - - - - - - - -	3524	6,215,605 – 6,215,700	+	6	98	93.54	-1.96	0.88	0.954560
2165	3R_DroMel_CAF1	6,215,605 – 6,215,700	- - - - - - - - -	3525	6,215,605 – 6,215,700	-	6	98	93.54	-1.55	0.89	0.879865
2166	3R_DroMel_CAF1	6,219,759 – 6,219,867	- - - - - - - - -	3526	6,219,759 – 6,219,867	+	6	109	84.49	-2.05	0.71	0.535513
2167	3R_DroMel_CAF1	6,222,481 – 6,222,584	- - - - - - - - -	3527	6,222,481 – 6,222,584	-	6	120	78.40	-1.19	0.75	0.740094
2168	3R_DroMel_CAF1	6,224,513 – 6,224,655	- - - "knownCDS=Parent=FBtr0082246;Name=CG17100-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17100-RA" - - - - -	3528	6,224,513 – 6,224,615	-	6	117	79.26	-2.08	0.62	0.883695
2168	3R_DroMel_CAF1	6,224,513 – 6,224,655		3529	6,224,535 – 6,224,655	-	6	120	76.41	-1.66	0.63	0.865759
2169	3R_DroMel_CAF1	6,224,911 – 6,225,063	- - - "knownCDS=Parent=FBtr0082246;Name=CG17100-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17100-RA" - - - - -	3530	6,224,911 – 6,225,001	+	6	93	86.52	-1.59	0.83	0.522140
				3531	6,224,971 – 6,225,063	+	6	92	83.77	-2.72	0.74	0.823146
				3532	6,224,971 – 6,225,063	-	6	92	83.77	-2.82	0.71	0.793602
2170	3R_DroMel_CAF1	6,228,281 – 6,228,377	- - - - - - - - -	3533	6,228,281 – 6,228,377	+	6	103	80.68	-1.43	0.70	0.659090
2171	3R_DroMel_CAF1	6,229,350 – 6,229,467	- - - "knownCDS=Parent=FBtr0082260;Name=CG6325-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6325-RA" - - - - -	3534	6,229,350 – 6,229,467	-	6	117	80.03	-1.35	0.65	0.547939
2172	3R_DroMel_CAF1	6,231,759 – 6,231,868	- - - - - - - - -	3535	6,231,759 – 6,231,868	+	6	113	81.11	-1.83	0.75	0.825927
2172	3R_DroMel_CAF1	6,231,759 – 6,231,868	- - - - - - - - -	3536	6,231,759 – 6,231,868	-	6	113	81.11	-1.54	0.73	0.717359
2173	3R_DroMel_CAF1	6,232,649 – 6,232,753	- - - "knownCDS=Parent=FBtr0082260;Name=CG6325-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6325-RA" - - - - -	3537	6,232,649 – 6,232,753	-	6	108	77.22	-1.49	0.60	0.634767
2174	3R_DroMel_CAF1	6,233,003 – 6,233,156	- - - - - - - - -	3538	6,233,003 – 6,233,123	+	4	120	86.67	-2.89	0.79	0.984677
				3539	6,233,003 – 6,233,123	-	4	120	86.67	-2.23	0.63	0.680736
				3540	6,233,043 – 6,233,156	+	4	116	81.90	-2.11	0.60	0.741335
				3541	6,233,043 – 6,233,156	-	4	116	81.90	-2.07	0.56	0.536507
2175	3R_DroMel_CAF1	6,233,448 – 6,233,621	- - - - - - - - -	3542	6,233,448 – 6,233,547	-	4	99	93.60	-1.30	0.97	0.575318
2175	3R_DroMel_CAF1	6,233,448 – 6,233,621	- - - - - - - - -	3543	6,233,522 – 6,233,621	+	6	117	74.41	-2.32	0.52	0.977336
2176	3R_DroMel_CAF1	6,233,834 – 6,233,951	- - "RNAmicro=f:6233834_t:6233953_strand:+_p:0.999944" - - - - - -	3544	6,233,834 – 6,233,951	+	6	120	84.27	-5.13	0.99	0.995832
2177	3R_DroMel_CAF1	6,233,998 – 6,234,103	"known=stem_loop ID=Dmel\CG_RFAM_MIR_48002329;Name=dme-mir-318" - "RNAmicro=f:6233998_t:6234117_strand:+_p:0.995939" - - - "miRBase=dme-mir-318\|6e-34" - "Flybase=FBgn0067686:mir-318:microRNA_encoding_gene\|7e-07"	3545	6,233,998 – 6,234,103	+	6	120	78.95	-2.39	0.84	0.964978
2178	3R_DroMel_CAF1	6,235,136 – 6,235,256	- - - "knownCDS=Parent=FBtr0082259;Name=Irp-1B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6342-RA" - - - - -	3546	6,235,136 – 6,235,256	+	6	120	83.22	-2.64	0.62	0.671768
2179	3R_DroMel_CAF1	6,236,034 – 6,236,134	- - - - - - - - -	3547	6,236,034 – 6,236,134	-	6	113	67.94	-1.40	0.58	0.802888
2180	3R_DroMel_CAF1	6,238,599 – 6,238,712	- - - - - - - - -	3548	6,238,599 – 6,238,712	+	5	114	76.92	-1.84	0.54	0.684917
2181	3R_DroMel_CAF1	6,241,820 – 6,241,910	- - - - - - - - -	3549	6,241,820 – 6,241,910	-	5	90	75.93	-1.75	0.34	0.516371
2182	3R_DroMel_CAF1	6,243,590 – 6,243,787	- - - - - - - - -	3550	6,243,590 – 6,243,697	-	5	110	90.09	-2.56	0.79	0.983913
2182	3R_DroMel_CAF1	6,243,590 – 6,243,787	- - - - - - - - -	3551	6,243,697 – 6,243,787	+	6	96	79.27	-1.45	0.72	0.779329
2183	3R_DroMel_CAF1	6,245,340 – 6,245,431	- - - - - - - - -	3552	6,245,340 – 6,245,431	+	6	94	77.43	-1.54	0.67	0.837869
2184	3R_DroMel_CAF1	6,245,991 – 6,246,114	- - - - - - - - -	3553	6,245,991 – 6,246,082	-	6	120	82.56	-1.85	0.70	0.659390
2184	3R_DroMel_CAF1	6,245,991 – 6,246,114	- - - - - - - - -	3554	6,246,002 – 6,246,114	-	6	119	81.50	-2.03	0.63	0.725114
2185	3R_DroMel_CAF1	6,249,749 – 6,249,840	- - - - - - - - -	3555	6,249,749 – 6,249,840	+	6	117	79.37	-2.50	0.68	0.956751
2186	3R_DroMel_CAF1	6,251,326 – 6,251,428	- - - - - - - - -	3556	6,251,326 – 6,251,428	-	5	102	76.77	-2.49	0.73	0.995956
2187	3R_DroMel_CAF1	6,252,653 – 6,252,743	- - - - - - - - -	3557	6,252,653 – 6,252,743	+	6	91	83.36	-1.76	0.68	0.523000
2188	3R_DroMel_CAF1	6,258,746 – 6,258,838	- - - - - - - - -	3558	6,258,746 – 6,258,838	+	6	103	73.26	-2.28	0.62	0.990576
2189	3R_DroMel_CAF1	6,259,965 – 6,260,057	- - - - - - - - -	3559	6,259,965 – 6,260,057	+	6	101	73.20	-2.24	0.42	0.932362
2189	3R_DroMel_CAF1	6,259,965 – 6,260,057	- - - - - - - - -	3560	6,259,965 – 6,260,057	-	6	101	73.20	-2.47	0.45	0.984297
2190	3R_DroMel_CAF1	6,263,441 – 6,263,543	- - - - - - - - -	3561	6,263,441 – 6,263,543	+	4	102	85.60	-1.99	0.91	0.948945
2191	3R_DroMel_CAF1	6,263,566 – 6,263,664	- - - - - - - - -	3562	6,263,566 – 6,263,664	+	6	115	84.04	-1.67	0.83	0.661758
2192	3R_DroMel_CAF1	6,265,079 – 6,265,172	- - - - - - - - -	3563	6,265,079 – 6,265,172	-	3	93	94.91	-3.31	1.00	0.996086
2193	3R_DroMel_CAF1	6,266,346 – 6,266,458	- - - - - - - - -	3564	6,266,346 – 6,266,438	+	6	120	81.00	-2.48	0.82	0.941984
2193	3R_DroMel_CAF1	6,266,346 – 6,266,458	- - - - - - - - -	3565	6,266,358 – 6,266,458	+	6	120	80.92	-2.10	0.83	0.917119
2194	3R_DroMel_CAF1	6,270,441 – 6,270,537	- - - - - - - - -	3566	6,270,441 – 6,270,537	-	6	114	81.38	-1.54	0.64	0.527720
2195	3R_DroMel_CAF1	6,271,198 – 6,271,294	- - - - - - - - -	3567	6,271,198 – 6,271,294	+	4	101	83.25	-2.58	0.54	0.665443
2195	3R_DroMel_CAF1	6,271,198 – 6,271,294	- - - - - - - - -	3568	6,271,198 – 6,271,294	-	4	101	83.25	-2.67	0.59	0.887022
2196	3R_DroMel_CAF1	6,272,025 – 6,272,117	- - - - - - - - -	3569	6,272,025 – 6,272,117	-	6	92	81.78	-1.46	0.80	0.667610
2197	3R_DroMel_CAF1	6,273,463 – 6,273,631	- - - - - - - - -	3570	6,273,463 – 6,273,554	-	6	112	80.81	-1.50	0.81	0.759607
				3571	6,273,482 – 6,273,594	-	6	120	94.33	-1.87	0.93	0.994739
				3572	6,273,514 – 6,273,631	+	6	120	94.23	-1.51	0.90	0.886388
2198	3R_DroMel_CAF1	6,275,661 – 6,275,756	- - - - - - - - -	3573	6,275,661 – 6,275,756	+	5	102	70.89	-2.48	0.44	0.996328
2198	3R_DroMel_CAF1	6,275,661 – 6,275,756	- - - - - - - - -	3574	6,275,661 – 6,275,756	-	5	102	70.89	-2.26	0.51	0.990181
2199	3R_DroMel_CAF1	6,279,905 – 6,280,005	- - - - - - - - -	3575	6,279,905 – 6,280,005	+	6	119	81.70	-2.30	0.60	0.723614
2200	3R_DroMel_CAF1	6,285,757 – 6,285,851	- - - - - - - - -	3576	6,285,757 – 6,285,851	-	5	104	87.82	-2.42	0.71	0.868007
2201	3R_DroMel_CAF1	6,286,160 – 6,286,259	- - - - - - - - -	3577	6,286,160 – 6,286,259	+	5	105	80.04	-1.86	0.53	0.524990
2202	3R_DroMel_CAF1	6,286,338 – 6,286,432	- - - - - - - - -	3578	6,286,338 – 6,286,432	-	4	94	80.11	-1.86	0.76	0.873663
2203	3R_DroMel_CAF1	6,288,060 – 6,288,155	- - - - - - - - -	3579	6,288,060 – 6,288,155	-	6	108	78.51	-1.78	0.65	0.863621
2204	3R_DroMel_CAF1	6,290,372 – 6,290,470	- - - - - - - - -	3580	6,290,372 – 6,290,470	+	6	113	77.09	-1.17	0.66	0.571449
2205	3R_DroMel_CAF1	6,291,694 – 6,291,785	- - - - - - - - -	3581	6,291,694 – 6,291,785	+	6	118	73.40	-1.59	0.64	0.919461
2205	3R_DroMel_CAF1	6,291,694 – 6,291,785	- - - - - - - - -	3582	6,291,694 – 6,291,785	-	6	118	73.40	-1.70	0.68	0.966504
2206	3R_DroMel_CAF1	6,296,512 – 6,296,602	- - - - - - - - -	3583	6,296,512 – 6,296,602	-	6	92	93.40	-1.45	0.89	0.827405
2207	3R_DroMel_CAF1	6,297,023 – 6,297,122	- - - - - - - - -	3584	6,297,023 – 6,297,122	-	6	119	77.75	-1.48	0.60	0.574635
2208	3R_DroMel_CAF1	6,304,223 – 6,304,317	- - - - - - - - -	3585	6,304,223 – 6,304,317	+	6	111	79.28	-1.51	0.65	0.696557
2209	3R_DroMel_CAF1	6,305,311 – 6,305,409	- - - - - - - - -	3586	6,305,311 – 6,305,409	+	3	99	79.78	-3.40	0.63	0.996634
2209	3R_DroMel_CAF1	6,305,311 – 6,305,409	- - - - - - - - -	3587	6,305,311 – 6,305,409	-	3	99	79.78	-2.56	0.68	0.984475
2210	3R_DroMel_CAF1	6,310,781 – 6,310,971	- - - - - - - - -	3588	6,310,781 – 6,310,881	+	6	107	78.98	-1.65	0.63	0.735927
2210	3R_DroMel_CAF1	6,310,781 – 6,310,971	- - - - - - - - -	3589	6,310,881 – 6,310,971	-	6	92	79.95	-4.24	0.41	0.980654
2211	3R_DroMel_CAF1	6,311,114 – 6,311,205	- - - - - - - - -	3590	6,311,114 – 6,311,205	-	4	100	81.38	-1.81	0.73	0.791373
2212	3R_DroMel_CAF1	6,312,217 – 6,312,366	- - - - - - - - -	3591	6,312,217 – 6,312,337	+	6	120	77.36	-1.37	0.72	0.841168
				3592	6,312,217 – 6,312,337	-	6	120	77.36	-1.54	0.78	0.921759
				3593	6,312,257 – 6,312,366	-	6	120	90.75	-2.09	0.81	0.591144
2213	3R_DroMel_CAF1	6,318,052 – 6,318,156	- - - - - - - - -	3594	6,318,052 – 6,318,156	-	6	120	86.81	-1.67	0.82	0.500000
2214	3R_DroMel_CAF1	6,321,337 – 6,321,467	- - - "knownCDS=texon3306;Parent=CG_RGUI_GID_mRNA_40007813, CG_DGIL_SNO_28364370" - - - - -	3595	6,321,337 – 6,321,441	+	4	106	89.42	-2.15	0.71	0.744951
2214	3R_DroMel_CAF1	6,321,337 – 6,321,467		3596	6,321,366 – 6,321,467	+	4	103	80.90	-1.99	0.58	0.621274
2215	3R_DroMel_CAF1	6,322,843 – 6,323,004	- - - - - - - - -	3597	6,322,843 – 6,322,953	+	6	110	98.55	-1.57	0.98	0.996778
				3598	6,322,883 – 6,322,989	+	6	109	95.13	-2.40	1.00	0.999970
				3599	6,322,913 – 6,323,004	+	6	107	81.39	-2.43	0.89	0.958621
2216	3R_DroMel_CAF1	6,324,119 – 6,324,223	- - - - - - - - -	3600	6,324,119 – 6,324,223	+	6	105	75.65	-1.48	0.58	0.596755
2217	3R_DroMel_CAF1	6,324,730 – 6,324,843	- - - - - - - - -	3601	6,324,730 – 6,324,843	+	6	118	79.52	-1.33	0.74	0.739343
2218	3R_DroMel_CAF1	6,328,821 – 6,328,933	- - - - - - - - -	3602	6,328,821 – 6,328,933	+	5	114	73.30	-1.44	0.05	0.644394
2219	3R_DroMel_CAF1	6,332,528 – 6,332,621	- - - - - - - - -	3603	6,332,528 – 6,332,621	-	6	101	89.30	-2.56	0.79	0.703966
2220	3R_DroMel_CAF1	6,333,041 – 6,333,141	- - - - - - - - -	3604	6,333,041 – 6,333,141	+	5	100	96.20	-1.08	0.96	0.574807
2221	3R_DroMel_CAF1	6,333,834 – 6,333,956	- - - - - - - - -	3605	6,333,834 – 6,333,938	+	4	108	90.88	-1.51	0.91	0.758656
				3606	6,333,834 – 6,333,938	-	4	108	90.88	-2.51	0.99	0.996849
				3607	6,333,866 – 6,333,956	+	6	92	82.75	-1.58	0.84	0.705253
				3608	6,333,866 – 6,333,956	-	6	92	82.75	-2.22	0.70	0.745287
2222	3R_DroMel_CAF1	6,337,077 – 6,337,185	- - - "knownCDS=Parent=FBtr0082256, FBtr0082254, FBtr0082255, FBtr0082253;Name=hth-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17117-RA, FlyBase+Annotation+IDs:CG17117-RB, FlyBase+Annotation+IDs:CG17117-RC, FlyBase+Annotation+IDs:CG17117-RD" - - - - -	3609	6,337,077 – 6,337,185	+	6	120	79.25	-1.39	0.62	0.500000
2223	3R_DroMel_CAF1	6,337,293 – 6,337,441	- - - - - - - - -	3610	6,337,293 – 6,337,405	-	6	112	84.04	-1.89	0.71	0.535736
2223	3R_DroMel_CAF1	6,337,293 – 6,337,441	- - - - - - - - -	3611	6,337,332 – 6,337,441	-	6	113	78.61	-2.46	0.53	0.921251
2224	3R_DroMel_CAF1	6,338,384 – 6,338,521	- - - - - - - - -	3612	6,338,384 – 6,338,484	+	6	109	77.68	-1.66	0.60	0.747398
				3613	6,338,415 – 6,338,521	+	6	109	81.49	-1.19	0.82	0.534966
				3614	6,338,415 – 6,338,521	-	6	109	81.49	-1.30	0.69	0.514670
2225	3R_DroMel_CAF1	6,339,998 – 6,340,103	- - - "knownCDS=Parent=FBtr0082256, FBtr0082254, FBtr0082255, FBtr0082253;Name=hth-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17117-RA, FlyBase+Annotation+IDs:CG17117-RB, FlyBase+Annotation+IDs:CG17117-RC, FlyBase+Annotation+IDs:CG17117-RD" - - - - -	3615	6,339,998 – 6,340,103	+	6	114	78.69	-1.22	0.70	0.645503
2226	3R_DroMel_CAF1	6,342,103 – 6,342,209	- - - - - - - - -	3616	6,342,103 – 6,342,209	-	5	108	86.24	-2.43	0.67	0.814828
2227	3R_DroMel_CAF1	6,343,917 – 6,344,017	- - - - - - - - -	3617	6,343,917 – 6,344,017	+	6	111	71.16	-1.82	0.53	0.919638
2227	3R_DroMel_CAF1	6,343,917 – 6,344,017	- - - - - - - - -	3618	6,343,917 – 6,344,017	-	6	111	71.16	-1.76	0.40	0.532307
2228	3R_DroMel_CAF1	6,344,346 – 6,344,439	- - - - - - - - -	3619	6,344,346 – 6,344,439	+	6	115	81.74	-3.95	0.67	0.961636
2228	3R_DroMel_CAF1	6,344,346 – 6,344,439	- - - - - - - - -	3620	6,344,346 – 6,344,439	-	6	115	81.74	-3.31	0.75	0.946223
2229	3R_DroMel_CAF1	6,348,717 – 6,348,807	- - - - - - - - -	3621	6,348,717 – 6,348,807	-	6	117	75.76	-1.60	0.59	0.750080
2230	3R_DroMel_CAF1	6,349,175 – 6,349,274	- - - - - - - - -	3622	6,349,175 – 6,349,274	+	6	106	83.73	-2.96	0.62	0.692500
2230	3R_DroMel_CAF1	6,349,175 – 6,349,274	- - - - - - - - -	3623	6,349,175 – 6,349,274	-	6	106	83.73	-3.23	0.78	0.930305
2231	3R_DroMel_CAF1	6,353,093 – 6,353,192	- - - - - - - - -	3624	6,353,093 – 6,353,192	+	6	119	81.67	-1.95	0.64	0.685451
2232	3R_DroMel_CAF1	6,357,130 – 6,357,229	- - - - - - - - -	3625	6,357,130 – 6,357,229	+	6	116	77.03	-1.93	0.49	0.624799
2232	3R_DroMel_CAF1	6,357,130 – 6,357,229	- - - - - - - - -	3626	6,357,130 – 6,357,229	-	6	116	77.03	-1.92	0.53	0.766551
2233	3R_DroMel_CAF1	6,358,258 – 6,358,356	- - - - - - - - -	3627	6,358,258 – 6,358,356	+	6	118	79.33	-1.59	0.59	0.545349
2234	3R_DroMel_CAF1	6,359,432 – 6,359,525	- - - - - - - - -	3628	6,359,432 – 6,359,525	+	6	104	78.82	-2.12	0.59	0.881430
2235	3R_DroMel_CAF1	6,359,974 – 6,360,081	- - - - - - - - -	3629	6,359,974 – 6,360,081	-	5	107	95.33	-1.57	0.86	0.883496
2236	3R_DroMel_CAF1	6,361,888 – 6,361,983	- - - - - - - - -	3630	6,361,888 – 6,361,983	+	6	105	78.42	-2.82	0.52	0.971556
2237	3R_DroMel_CAF1	6,362,475 – 6,362,567	- - - - - - - - -	3631	6,362,475 – 6,362,567	-	6	105	86.44	-2.15	0.76	0.522820
2238	3R_DroMel_CAF1	6,363,185 – 6,363,282	- - - - - - - - -	3632	6,363,185 – 6,363,282	-	6	97	97.73	-0.68	0.97	0.538000
2239	3R_DroMel_CAF1	6,363,692 – 6,363,805	- - - - - - - - -	3633	6,363,692 – 6,363,805	+	6	120	92.95	-1.56	0.84	0.506498
2239	3R_DroMel_CAF1	6,363,692 – 6,363,805	- - - - - - - - -	3634	6,363,692 – 6,363,805	-	6	120	92.95	-2.52	0.81	0.833569
2240	3R_DroMel_CAF1	6,364,890 – 6,364,989	- - - - - - - - -	3635	6,364,890 – 6,364,989	+	6	107	82.36	-1.84	0.66	0.613594
2241	3R_DroMel_CAF1	6,367,827 – 6,367,941	- - - - - - - - -	3636	6,367,827 – 6,367,941	+	6	120	94.39	-1.06	0.96	0.860625
2242	3R_DroMel_CAF1	6,368,186 – 6,368,282	- - - - - - - - -	3637	6,368,186 – 6,368,282	+	4	106	77.06	-2.31	0.64	0.981233
2243	3R_DroMel_CAF1	6,369,060 – 6,369,165	- - - - - - - - -	3638	6,369,060 – 6,369,165	-	5	111	91.90	-1.69	0.95	0.991114
2244	3R_DroMel_CAF1	6,369,436 – 6,369,530	- - - - - - - - -	3639	6,369,436 – 6,369,530	-	6	94	91.84	-1.64	0.85	0.609999
2245	3R_DroMel_CAF1	6,370,935 – 6,371,030	- - - - - - - - -	3640	6,370,935 – 6,371,030	-	6	120	79.91	-1.24	0.66	0.500000
2246	3R_DroMel_CAF1	6,376,879 – 6,376,994	- - - - - - - - -	3641	6,376,879 – 6,376,994	+	6	115	68.16	-2.26	0.25	0.794184
2247	3R_DroMel_CAF1	6,379,653 – 6,379,762	- - - - - - - - -	3642	6,379,653 – 6,379,762	+	6	110	75.20	-1.63	0.55	0.670188
2248	3R_DroMel_CAF1	6,381,181 – 6,381,317	- - - - - - - - -	3643	6,381,181 – 6,381,282	+	6	106	74.25	-2.57	0.64	0.994191
				3644	6,381,181 – 6,381,282	-	6	106	74.25	-1.88	0.70	0.978981
				3645	6,381,205 – 6,381,317	+	6	119	78.76	-2.32	0.53	0.868443
				3646	6,381,205 – 6,381,317	-	6	119	78.76	-2.37	0.53	0.897239
2249	3R_DroMel_CAF1	6,386,144 – 6,386,237	- - - - - - - - -	3647	6,386,144 – 6,386,237	+	6	97	80.94	-2.14	0.64	0.817004
2250	3R_DroMel_CAF1	6,388,026 – 6,388,128	- - - - - - - - -	3648	6,388,026 – 6,388,128	+	6	117	79.78	-1.65	0.69	0.803005
2250	3R_DroMel_CAF1	6,388,026 – 6,388,128	- - - - - - - - -	3649	6,388,026 – 6,388,128	-	6	117	79.78	-1.49	0.69	0.728108
2251	3R_DroMel_CAF1	6,390,116 – 6,390,227	- - - - - - - - -	3650	6,390,116 – 6,390,227	-	4	113	74.63	-2.78	0.47	0.973031
2252	3R_DroMel_CAF1	6,393,132 – 6,393,234	- - - - - - - - -	3651	6,393,132 – 6,393,234	+	6	102	76.45	-2.72	0.47	0.979601
2252	3R_DroMel_CAF1	6,393,132 – 6,393,234	- - - - - - - - -	3652	6,393,132 – 6,393,234	-	6	102	76.45	-1.93	0.51	0.745037
2253	3R_DroMel_CAF1	6,396,247 – 6,396,346	- - - - - - - - -	3653	6,396,247 – 6,396,346	+	6	117	87.87	-1.85	0.91	0.929851
2254	3R_DroMel_CAF1	6,396,692 – 6,396,802	- - - - - - - - -	3654	6,396,692 – 6,396,802	-	6	120	81.43	-1.43	0.78	0.669850
2255	3R_DroMel_CAF1	6,399,747 – 6,399,848	- - - - - - - - -	3655	6,399,747 – 6,399,848	+	6	108	78.14	-1.11	0.68	0.528342
2256	3R_DroMel_CAF1	6,401,441 – 6,401,537	- - - - - - - - -	3656	6,401,441 – 6,401,537	+	5	102	89.74	-1.74	0.74	0.622660
2256	3R_DroMel_CAF1	6,401,441 – 6,401,537	- - - - - - - - -	3657	6,401,441 – 6,401,537	-	5	102	89.74	-1.73	0.77	0.724165
2257	3R_DroMel_CAF1	6,403,161 – 6,403,254	- - - - - - - - -	3658	6,403,161 – 6,403,254	-	6	113	79.58	-1.84	0.59	0.718104
2258	3R_DroMel_CAF1	6,406,539 – 6,406,645	- - - - - - - - -	3659	6,406,539 – 6,406,645	-	6	113	80.25	-2.01	0.52	0.525330
2259	3R_DroMel_CAF1	6,406,853 – 6,406,983	- - - - - - - - -	3660	6,406,853 – 6,406,966	-	6	118	69.38	-2.08	0.60	0.986226
				3661	6,406,893 – 6,406,983	+	5	95	80.08	-2.09	0.42	0.578815
				3662	6,406,893 – 6,406,983	-	5	95	80.08	-2.40	0.65	0.966807
2260	3R_DroMel_CAF1	6,408,357 – 6,408,453	- - - - - - - - -	3663	6,408,357 – 6,408,453	+	6	97	89.78	-2.63	0.93	0.998578
2261	3R_DroMel_CAF1	6,410,508 – 6,410,606	- - - - - - - - -	3664	6,410,508 – 6,410,606	-	6	116	81.22	-2.78	0.42	0.518308
2262	3R_DroMel_CAF1	6,411,316 – 6,411,435	- - - - - - - - -	3665	6,411,316 – 6,411,435	-	6	120	98.32	-1.15	0.96	0.933867
2263	3R_DroMel_CAF1	6,413,093 – 6,413,198	- - - - - - - - -	3666	6,413,093 – 6,413,198	-	6	108	83.83	-1.79	0.71	0.532726
2264	3R_DroMel_CAF1	6,419,403 – 6,419,506	- - - - - - - - -	3667	6,419,403 – 6,419,506	-	3	104	91.64	-2.95	0.89	0.963519
2265	3R_DroMel_CAF1	6,420,366 – 6,420,458	- - - - - - - - -	3668	6,420,366 – 6,420,458	-	5	116	69.73	-1.66	0.47	0.587265
2266	3R_DroMel_CAF1	6,422,852 – 6,422,943	- - - - - - - - -	3669	6,422,852 – 6,422,943	-	6	91	84.48	-1.83	0.74	0.534116
2267	3R_DroMel_CAF1	6,425,245 – 6,425,342	- - - - - - - - -	3670	6,425,245 – 6,425,342	+	6	111	82.43	-1.79	0.64	0.553689
2268	3R_DroMel_CAF1	6,428,095 – 6,428,253	- - - - - - - - -	3671	6,428,095 – 6,428,203	+	5	120	90.16	-3.14	0.75	0.984133
				3672	6,428,095 – 6,428,203	-	5	120	90.16	-3.30	0.86	0.999776
				3673	6,428,135 – 6,428,243	+	5	120	88.86	-1.71	0.78	0.757965
				3674	6,428,163 – 6,428,253	+	5	106	81.07	-1.57	0.80	0.686652
2269	3R_DroMel_CAF1	6,428,505 – 6,428,654	- - - "knownCDS=Parent=FBtr0082256, FBtr0082254, FBtr0082255, FBtr0082253, FBtr0100454;Name=hth-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17117-RA, FlyBase+Annotation+IDs:CG17117-RB, FlyBase+Annotation+IDs:CG17117-RC, FlyBase+Annotation+IDs:CG17117-RD, FlyBase+Annotation+IDs:CG17117-RE" - - - - -	3675	6,428,505 – 6,428,614	-	6	120	91.12	-1.66	0.90	0.924924
2269	3R_DroMel_CAF1	6,428,505 – 6,428,654		3676	6,428,534 – 6,428,654	-	6	120	93.78	-1.14	0.94	0.822063
2270	3R_DroMel_CAF1	6,428,707 – 6,428,803	- - - - - - - - -	3677	6,428,707 – 6,428,803	+	5	98	88.70	-1.75	0.77	0.761129
2271	3R_DroMel_CAF1	6,439,463 – 6,439,556	- - - - - - - - -	3678	6,439,463 – 6,439,556	-	6	108	78.63	-1.06	0.73	0.602784
2272	3R_DroMel_CAF1	6,454,082 – 6,454,193	- - - - - - - - -	3679	6,454,082 – 6,454,193	+	4	112	77.28	-1.93	0.61	0.812329
2273	3R_DroMel_CAF1	6,454,516 – 6,454,621	- - - - - - - - -	3680	6,454,516 – 6,454,621	+	5	105	90.29	-1.94	0.83	0.962806
2274	3R_DroMel_CAF1	6,457,489 – 6,457,592	- - - - - - - - -	3681	6,457,489 – 6,457,592	+	6	120	74.05	-2.05	0.44	0.822723
2275	3R_DroMel_CAF1	6,469,058 – 6,469,149	- - - - - - - - -	3682	6,469,058 – 6,469,149	+	5	106	90.55	-2.12	0.74	0.795560
2276	3R_DroMel_CAF1	6,470,552 – 6,470,657	- - - - - - - - -	3683	6,470,552 – 6,470,657	-	5	106	90.60	-1.55	0.78	0.613041
2277	3R_DroMel_CAF1	6,473,180 – 6,473,279	- - - - - - - - -	3684	6,473,180 – 6,473,279	-	6	120	84.09	-1.49	0.80	0.515608
2278	3R_DroMel_CAF1	6,476,412 – 6,476,517	- - - - - - - - -	3685	6,476,412 – 6,476,517	-	5	118	92.20	-1.61	0.89	0.958759
2279	3R_DroMel_CAF1	6,476,727 – 6,476,823	- - - - - - - - -	3686	6,476,727 – 6,476,823	-	5	110	81.84	-2.05	0.65	0.822993
2280	3R_DroMel_CAF1	6,484,357 – 6,484,449	- - - - - - - - -	3687	6,484,357 – 6,484,449	+	6	100	78.96	-1.50	0.63	0.638148
2281	3R_DroMel_CAF1	6,490,907 – 6,491,028	- - - - - - - - -	3688	6,490,907 – 6,491,004	+	6	114	80.57	-1.55	0.72	0.746260
				3689	6,490,907 – 6,491,004	-	6	114	80.57	-2.06	0.65	0.830625
				3690	6,490,937 – 6,491,028	-	6	120	72.34	-1.93	0.60	0.970104
2282	3R_DroMel_CAF1	6,493,161 – 6,493,260	- - - - - - - - -	3691	6,493,161 – 6,493,260	-	6	99	86.20	-2.78	0.76	0.753746
2283	3R_DroMel_CAF1	6,496,206 – 6,496,312	- - - - - - - - -	3692	6,496,206 – 6,496,312	+	6	112	81.54	-1.40	0.71	0.589376
2284	3R_DroMel_CAF1	6,496,959 – 6,497,072	- - - - - - - - -	3693	6,496,959 – 6,497,049	+	6	110	80.61	-1.72	0.59	0.563388
2284	3R_DroMel_CAF1	6,496,959 – 6,497,072	- - - - - - - - -	3694	6,496,973 – 6,497,072	+	6	118	75.88	-1.42	0.65	0.806640
2285	3R_DroMel_CAF1	6,498,202 – 6,498,294	- - - - - - - - -	3695	6,498,202 – 6,498,294	-	5	94	83.37	-1.73	0.64	0.508520
2286	3R_DroMel_CAF1	6,499,505 – 6,499,599	- - - - - - - - -	3696	6,499,505 – 6,499,599	+	5	102	72.93	-2.08	0.34	0.943258
2286	3R_DroMel_CAF1	6,499,505 – 6,499,599	- - - - - - - - -	3697	6,499,505 – 6,499,599	-	5	102	72.93	-1.83	0.50	0.797588
2287	3R_DroMel_CAF1	6,503,995 – 6,504,107	- - - - - - - - -	3698	6,503,995 – 6,504,107	+	4	113	76.95	-1.83	0.65	0.819043
2288	3R_DroMel_CAF1	6,505,656 – 6,505,748	- - - - - - - - -	3699	6,505,656 – 6,505,748	+	5	103	76.66	-1.47	0.78	0.885773
2288	3R_DroMel_CAF1	6,505,656 – 6,505,748	- - - - - - - - -	3700	6,505,656 – 6,505,748	-	5	103	76.66	-1.89	0.44	0.648110
2289	3R_DroMel_CAF1	6,507,693 – 6,507,794	- - - - - - - - -	3701	6,507,693 – 6,507,794	+	5	102	86.18	-1.65	0.73	0.587247
2290	3R_DroMel_CAF1	6,507,860 – 6,507,956	- - - - - - - - -	3702	6,507,860 – 6,507,956	+	3	107	86.60	-2.00	0.78	0.641694
2290	3R_DroMel_CAF1	6,507,860 – 6,507,956	- - - - - - - - -	3703	6,507,860 – 6,507,956	-	3	107	86.60	-2.04	0.95	0.972013
2291	3R_DroMel_CAF1	6,510,945 – 6,511,053	- - - - - - - - -	3704	6,510,945 – 6,511,053	-	5	108	95.46	-1.14	0.90	0.534001
2292	3R_DroMel_CAF1	6,511,371 – 6,511,473	- - - - - - - - -	3705	6,511,371 – 6,511,473	+	5	116	82.91	-2.39	0.62	0.883817
2292	3R_DroMel_CAF1	6,511,371 – 6,511,473	- - - - - - - - -	3706	6,511,371 – 6,511,473	-	5	116	82.91	-2.53	0.63	0.926476
2293	3R_DroMel_CAF1	6,511,508 – 6,511,627	- - - - - - - - -	3707	6,511,508 – 6,511,627	+	4	120	87.31	-2.09	0.67	0.735678
2294	3R_DroMel_CAF1	6,511,958 – 6,512,053	- - - - - - - - -	3708	6,511,958 – 6,512,053	+	5	114	83.77	-1.76	0.70	0.643842
2295	3R_DroMel_CAF1	6,512,834 – 6,512,925	- - - - - - - - -	3709	6,512,834 – 6,512,925	+	6	111	71.37	-1.96	0.61	0.979825
2296	3R_DroMel_CAF1	6,522,274 – 6,522,427	- - - - - - - - -	3710	6,522,274 – 6,522,394	+	5	120	75.11	-1.95	0.60	0.926865
				3711	6,522,274 – 6,522,394	-	5	120	75.11	-1.73	0.51	0.571477
				3712	6,522,314 – 6,522,427	+	5	113	79.69	-1.81	0.67	0.781134
2297	3R_DroMel_CAF1	6,534,307 – 6,534,417	- - - "knownCDS=Parent=FBtr0082318;Name=CG31373-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31373-RA" - - - - -	3713	6,534,307 – 6,534,417	-	6	120	79.84	-1.41	0.66	0.629649
2298	3R_DroMel_CAF1	6,541,052 – 6,541,158	- - - "knownCDS=Parent=FBtr0082269;Name=CG4073-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4073-RA" - - - - -	3714	6,541,052 – 6,541,158	+	6	107	80.88	-2.12	0.65	0.827926
2298	3R_DroMel_CAF1	6,541,052 – 6,541,158		3715	6,541,052 – 6,541,158	-	6	107	80.88	-1.54	0.69	0.676448
2299	3R_DroMel_CAF1	6,541,234 – 6,541,335	- - - "knownCDS=Parent=FBtr0082269;Name=CG4073-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4073-RA" - - - - -	3716	6,541,234 – 6,541,335	+	6	105	79.41	-3.55	0.63	0.984931
2299	3R_DroMel_CAF1	6,541,234 – 6,541,335		3717	6,541,234 – 6,541,335	-	6	105	79.41	-2.70	0.39	0.661707
2300	3R_DroMel_CAF1	6,541,705 – 6,541,853	- - - - - - - - -	3718	6,541,705 – 6,541,825	-	5	120	87.08	-2.17	0.69	0.743244
2300	3R_DroMel_CAF1	6,541,705 – 6,541,853	- - - - - - - - -	3719	6,541,745 – 6,541,853	+	5	114	81.61	-1.81	0.61	0.585822
2301	3R_DroMel_CAF1	6,542,280 – 6,542,400	- - - - - - - - -	3720	6,542,280 – 6,542,400	-	4	120	93.14	-1.63	0.87	0.725876
2302	3R_DroMel_CAF1	6,545,203 – 6,545,312	- - - - - - - - -	3721	6,545,203 – 6,545,312	+	5	109	82.08	-1.85	0.62	0.609828
2303	3R_DroMel_CAF1	6,550,880 – 6,551,109	- - - - - - - - -	3722	6,550,880 – 6,550,970	+	5	90	98.00	-1.21	0.95	0.639208
				3723	6,550,907 – 6,551,001	+	6	94	91.49	-2.75	0.82	0.899502
				3724	6,550,907 – 6,551,001	-	6	94	91.49	-1.86	0.85	0.761844
				3725	6,550,932 – 6,551,034	+	6	103	96.87	-2.39	0.82	0.807804
				3726	6,550,932 – 6,551,034	-	6	103	96.87	-1.99	0.84	0.773723
				3727	6,551,001 – 6,551,109	+	5	111	92.49	-2.33	0.82	0.986783
2304	3R_DroMel_CAF1	6,552,020 – 6,552,111	- - - - - - - - -	3728	6,552,020 – 6,552,111	-	6	96	78.02	-1.66	0.55	0.513420
2305	3R_DroMel_CAF1	6,559,059 – 6,559,150	- - - - - - - - -	3729	6,559,059 – 6,559,150	+	6	107	77.80	-1.93	0.51	0.664263
2306	3R_DroMel_CAF1	6,565,093 – 6,565,208	- - - "knownCDS=Parent=FBtr0082315;Name=Takr86C-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6515-RA" - - - - -	3730	6,565,093 – 6,565,208	-	6	115	75.67	-0.97	0.78	0.788899
2307	3R_DroMel_CAF1	6,565,565 – 6,565,660	- - - - - - - - -	3731	6,565,565 – 6,565,660	+	6	107	82.36	-2.85	0.51	0.647109
2308	3R_DroMel_CAF1	6,567,335 – 6,567,438	- - - - - - - - -	3732	6,567,335 – 6,567,438	+	4	103	93.92	-1.65	0.94	0.842237
2309	3R_DroMel_CAF1	6,571,246 – 6,571,359	- - - - - - - - -	3733	6,571,246 – 6,571,359	-	5	113	95.22	-1.87	0.82	0.889463
2310	3R_DroMel_CAF1	6,572,592 – 6,572,682	- - - - - - - - -	3734	6,572,592 – 6,572,682	+	6	116	78.18	-1.74	0.62	0.809473
2311	3R_DroMel_CAF1	6,573,254 – 6,573,344	- - - - - - - - -	3735	6,573,254 – 6,573,344	+	6	96	79.78	-1.46	0.63	0.584344
2312	3R_DroMel_CAF1	6,576,048 – 6,576,144	- - - - - - - - -	3736	6,576,048 – 6,576,144	-	5	116	73.57	-2.46	0.35	0.994089
2313	3R_DroMel_CAF1	6,580,121 – 6,580,213	- - - "knownCDS=Parent=FBtr0082313, FBtr0082314;Name=CG14691-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14691-RB, FlyBase+Annotation+IDs:CG14691-RA" - - - - -	3737	6,580,121 – 6,580,213	-	6	92	81.26	-2.18	0.59	0.722503
2314	3R_DroMel_CAF1	6,580,765 – 6,580,870	- - - - - - - - -	3738	6,580,765 – 6,580,870	-	6	119	76.69	-1.67	0.54	0.596201
2315	3R_DroMel_CAF1	6,582,999 – 6,583,164	- - - - - - - - -	3739	6,582,999 – 6,583,101	-	5	102	81.91	-2.07	0.57	0.678259
				3740	6,583,026 – 6,583,141	-	3	115	86.10	-2.24	0.71	0.691045
				3741	6,583,066 – 6,583,164	+	3	98	83.57	-3.86	0.59	0.951174
				3742	6,583,066 – 6,583,164	-	3	98	83.57	-3.41	0.62	0.948269
2316	3R_DroMel_CAF1	6,589,436 – 6,589,548	- - - "knownCDS=Parent=FBtr0082273;Name=CG14685-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14685-RD" - - - - -	3743	6,589,436 – 6,589,548	-	5	112	88.30	-1.86	0.74	0.719630
2317	3R_DroMel_CAF1	6,594,102 – 6,594,422	- - - "knownCDS=Parent=FBtr0082307;Name=fau-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6544-RA" - - - - -	3744	6,594,102 – 6,594,222	-	5	120	97.83	-1.12	0.95	0.500000
				3745	6,594,142 – 6,594,262	+	5	120	98.33	-1.34	0.94	0.751916
				3746	6,594,142 – 6,594,262	-	5	120	98.33	-2.01	0.97	0.996822
				3747	6,594,182 – 6,594,302	-	5	120	98.00	-1.69	0.96	0.983126
				3748	6,594,302 – 6,594,422	+	5	120	96.42	-1.15	0.95	0.654824
				3749	6,594,302 – 6,594,422	-	5	120	96.42	-1.36	0.90	0.790686
2318	3R_DroMel_CAF1	6,594,582 – 6,594,742	- - - "knownCDS=Parent=FBtr0082307;Name=fau-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6544-RA" - - - - -	3750	6,594,582 – 6,594,702	+	3	120	93.84	-2.22	0.88	0.800326
				3751	6,594,622 – 6,594,742	+	5	120	93.00	-2.38	0.84	0.995112
				3752	6,594,622 – 6,594,742	-	5	120	93.00	-2.55	0.81	0.990187
2319	3R_DroMel_CAF1	6,602,299 – 6,602,397	- - - - - - - - -	3753	6,602,299 – 6,602,397	-	4	98	83.99	-2.78	0.54	0.686554
2320	3R_DroMel_CAF1	6,605,201 – 6,605,294	- - - - - - - - -	3754	6,605,201 – 6,605,294	+	6	94	93.29	-2.61	0.85	0.977214
2320	3R_DroMel_CAF1	6,605,201 – 6,605,294	- - - - - - - - -	3755	6,605,201 – 6,605,294	-	6	94	93.29	-3.06	0.91	0.999593
2321	3R_DroMel_CAF1	6,609,691 – 6,609,789	- - - - - - - - -	3756	6,609,691 – 6,609,789	+	6	99	90.31	-2.11	0.83	0.740308
2322	3R_DroMel_CAF1	6,611,991 – 6,612,102	- - - - - - - - -	3757	6,611,991 – 6,612,102	+	5	112	89.17	-2.13	0.78	0.929830
2322	3R_DroMel_CAF1	6,611,991 – 6,612,102	- - - - - - - - -	3758	6,611,991 – 6,612,102	-	5	112	89.17	-2.39	0.71	0.833315
2323	3R_DroMel_CAF1	6,625,479 – 6,625,591	- - - "knownCDS=Parent=FBtr0089689;Name=CG14692-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14692-RA" - - - - -	3759	6,625,479 – 6,625,591	+	3	112	80.36	-2.34	0.62	0.890342
2324	3R_DroMel_CAF1	6,628,682 – 6,628,783	- - - "knownCDS=Parent=FBtr0089689;Name=CG14692-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14692-RA" - - - - -	3760	6,628,682 – 6,628,783	-	6	101	74.46	-1.92	0.41	0.561018
2325	3R_DroMel_CAF1	6,628,857 – 6,628,950	- - - "knownCDS=Parent=FBtr0089689;Name=CG14692-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14692-RA" - - - - -	3761	6,628,857 – 6,628,950	-	6	99	80.04	-1.97	0.68	0.871994
2326	3R_DroMel_CAF1	6,643,379 – 6,643,481	- - - - - - - - -	3762	6,643,379 – 6,643,481	+	5	102	89.62	-1.78	0.77	0.755155
2327	3R_DroMel_CAF1	6,644,830 – 6,644,934	- - - - - - - - -	3763	6,644,830 – 6,644,934	+	3	104	96.79	-1.98	0.87	0.572118
2328	3R_DroMel_CAF1	6,646,880 – 6,646,970	- - - - - - - - -	3764	6,646,880 – 6,646,970	+	4	109	75.76	-2.56	0.58	0.992933
2329	3R_DroMel_CAF1	6,647,215 – 6,647,308	- - - - - - - - -	3765	6,647,215 – 6,647,308	+	6	103	94.81	-1.49	0.86	0.600576
2330	3R_DroMel_CAF1	6,648,015 – 6,648,111	- - - - - - - - -	3766	6,648,015 – 6,648,111	-	5	99	95.27	-1.09	0.93	0.551518
2331	3R_DroMel_CAF1	6,649,187 – 6,649,318	- - - - - - - - -	3767	6,649,187 – 6,649,286	-	6	104	78.54	-1.23	0.69	0.653499
2331	3R_DroMel_CAF1	6,649,187 – 6,649,318	- - - - - - - - -	3768	6,649,218 – 6,649,318	-	6	102	80.25	-1.41	0.64	0.527825
2332	3R_DroMel_CAF1	6,651,911 – 6,652,007	- - - - - - - - -	3769	6,651,911 – 6,652,007	-	4	99	74.60	-2.47	0.49	0.938145
2333	3R_DroMel_CAF1	6,654,149 – 6,654,259	- - - - - - - - -	3770	6,654,149 – 6,654,259	+	5	110	84.00	-2.62	0.66	0.936830
2333	3R_DroMel_CAF1	6,654,149 – 6,654,259	- - - - - - - - -	3771	6,654,149 – 6,654,259	-	5	110	84.00	-1.91	0.65	0.628455
2334	3R_DroMel_CAF1	6,657,361 – 6,657,507	- - - - - - - - -	3772	6,657,361 – 6,657,471	-	4	110	95.28	-1.68	0.91	0.756103
2334	3R_DroMel_CAF1	6,657,361 – 6,657,507	- - - - - - - - -	3773	6,657,401 – 6,657,507	-	4	106	96.52	-1.95	0.87	0.712225
2335	3R_DroMel_CAF1	6,658,899 – 6,658,998	- - - - - - - - -	3774	6,658,899 – 6,658,998	-	6	104	77.63	-3.12	0.67	0.989863
2336	3R_DroMel_CAF1	6,659,550 – 6,659,662	- - - - - - - - -	3775	6,659,550 – 6,659,662	-	4	112	86.96	-1.64	0.74	0.661365
2337	3R_DroMel_CAF1	6,660,050 – 6,660,148	- - - - - - - - -	3776	6,660,050 – 6,660,148	+	6	109	81.47	-1.67	0.63	0.566040
2337	3R_DroMel_CAF1	6,660,050 – 6,660,148	- - - - - - - - -	3777	6,660,050 – 6,660,148	-	6	109	81.47	-1.97	0.61	0.653433
2338	3R_DroMel_CAF1	6,661,074 – 6,661,166	- - - - - - - - -	3778	6,661,074 – 6,661,166	-	5	99	87.20	-2.73	0.66	0.833780
2339	3R_DroMel_CAF1	6,662,380 – 6,662,473	- - - - - - - - -	3779	6,662,380 – 6,662,473	-	4	102	89.37	-1.47	0.83	0.602008
2340	3R_DroMel_CAF1	6,663,851 – 6,663,971	- - - "knownCDS=Parent=FBtr0082282;Name=CG4655-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4655-RA" - - - - -	3780	6,663,851 – 6,663,971	-	6	120	79.36	-2.10	0.61	0.871281
2341	3R_DroMel_CAF1	6,670,550 – 6,670,660	- - - - - - - - -	3781	6,670,550 – 6,670,660	+	5	120	75.16	-1.76	0.22	0.765011
2342	3R_DroMel_CAF1	6,670,789 – 6,670,884	- - - - - - - - -	3782	6,670,789 – 6,670,884	-	6	120	76.59	-0.87	0.73	0.541116
2343	3R_DroMel_CAF1	6,672,859 – 6,672,972	- - - "knownCDS=Parent=FBtr0089880;Name=CG4509-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4509-RB" - - - - -	3783	6,672,859 – 6,672,972	+	6	116	79.65	-1.71	0.58	0.584487
2344	3R_DroMel_CAF1	6,675,924 – 6,676,019	- - - - - - - - -	3784	6,675,924 – 6,676,019	+	5	103	82.07	-2.24	0.51	0.655903
2344	3R_DroMel_CAF1	6,675,924 – 6,676,019	- - - - - - - - -	3785	6,675,924 – 6,676,019	-	5	103	82.07	-2.13	0.65	0.850102
2345	3R_DroMel_CAF1	6,676,174 – 6,676,302	- - - - - - - - -	3786	6,676,174 – 6,676,273	-	6	120	78.79	-1.72	0.64	0.821222
				3787	6,676,212 – 6,676,302	+	6	120	75.32	-2.18	0.53	0.950803
				3788	6,676,212 – 6,676,302	-	6	120	75.32	-2.90	0.54	0.995621
2346	3R_DroMel_CAF1	6,677,119 – 6,677,223	- - - - - - - - -	3789	6,677,119 – 6,677,223	-	6	117	79.02	-1.81	0.56	0.635984
2347	3R_DroMel_CAF1	6,680,985 – 6,681,102	- - - "knownCDS=Parent=FBtr0082286;Name=CG4511-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4511-RA" - - - - -	3790	6,680,985 – 6,681,102	-	5	120	93.25	-1.47	0.89	0.907839
2348	3R_DroMel_CAF1	6,681,182 – 6,681,302	- - - "knownCDS=Parent=FBtr0082286;Name=CG4511-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4511-RA" - - - - -	3791	6,681,182 – 6,681,302	+	5	120	97.33	-1.83	0.92	0.986271
2348	3R_DroMel_CAF1	6,681,182 – 6,681,302		3792	6,681,182 – 6,681,302	-	5	120	97.33	-1.65	0.92	0.961912
2349	3R_DroMel_CAF1	6,701,852 – 6,701,948	- - - - - - - - -	3793	6,701,852 – 6,701,948	+	6	118	69.77	-2.08	0.32	0.785495
2350	3R_DroMel_CAF1	6,710,163 – 6,710,260	- - - - - - - - -	3794	6,710,163 – 6,710,260	+	3	97	88.85	-4.30	0.92	0.981812
2351	3R_DroMel_CAF1	6,712,307 – 6,712,410	- - - - - - - - -	3795	6,712,307 – 6,712,410	-	5	109	90.96	-2.74	0.81	0.995741
2352	3R_DroMel_CAF1	6,714,368 – 6,714,510	- - - - - - - - -	3796	6,714,368 – 6,714,477	-	5	115	88.07	-1.88	0.74	0.738045
2352	3R_DroMel_CAF1	6,714,368 – 6,714,510	- - - - - - - - -	3797	6,714,402 – 6,714,510	+	6	115	81.03	-2.45	0.48	0.550884
2353	3R_DroMel_CAF1	6,716,621 – 6,716,731	- - - "knownCDS=Parent=FBtr0082329;Name=CG6621-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6621-RA" - - - - -	3798	6,716,621 – 6,716,731	-	5	116	82.59	-2.35	0.48	0.610734
2354	3R_DroMel_CAF1	6,717,120 – 6,717,251	- - "RNAmicro=f:6717153_t:6717253_strand:+_p:0.979868" - - - - - -	3799	6,717,120 – 6,717,224	-	3	107	86.67	-1.87	0.86	0.736951
2354	3R_DroMel_CAF1	6,717,120 – 6,717,251		3800	6,717,153 – 6,717,251	-	3	101	89.97	-2.08	0.91	0.883140
2355	3R_DroMel_CAF1	6,717,604 – 6,717,714	- - - "knownCDS=Parent=FBtr0082329;Name=CG6621-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6621-RA" - - - - -	3801	6,717,604 – 6,717,714	-	6	120	84.82	-2.22	0.85	0.887365
2356	3R_DroMel_CAF1	6,718,602 – 6,718,717	- - - - - - - - -	3802	6,718,602 – 6,718,717	+	6	120	78.58	-1.53	0.68	0.804201
2357	3R_DroMel_CAF1	6,720,678 – 6,720,785	- - - "knownCDS=Parent=FBtr0082325;Name=CG4674-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4674-RA" - - - - -	3803	6,720,678 – 6,720,785	-	6	110	80.82	-2.01	0.59	0.680815
2358	3R_DroMel_CAF1	6,721,812 – 6,721,929	- - - - - - - - -	3804	6,721,812 – 6,721,929	+	6	120	88.36	-1.89	0.90	0.933798
2359	3R_DroMel_CAF1	6,723,444 – 6,723,562	- - - - - - - - -	3805	6,723,444 – 6,723,562	+	6	120	95.79	-1.47	0.95	0.985290
2360	3R_DroMel_CAF1	6,723,621 – 6,723,735	- - - - - - - - -	3806	6,723,621 – 6,723,735	-	6	120	88.16	-2.64	0.78	0.716642
2361	3R_DroMel_CAF1	6,723,815 – 6,723,910	- - - - - - - - -	3807	6,723,815 – 6,723,910	+	5	95	85.02	-1.62	0.75	0.599168
2362	3R_DroMel_CAF1	6,724,013 – 6,724,156	- - - - - - - - -	3808	6,724,013 – 6,724,117	-	5	120	79.63	-2.24	0.41	0.780390
2362	3R_DroMel_CAF1	6,724,013 – 6,724,156	- - - - - - - - -	3809	6,724,046 – 6,724,156	-	5	120	81.45	-2.19	0.56	0.781891
2363	3R_DroMel_CAF1	6,725,158 – 6,725,292	- - - - - - - - -	3810	6,725,158 – 6,725,278	+	4	120	86.17	-2.91	0.80	0.989195
				3811	6,725,158 – 6,725,278	-	4	120	86.17	-2.47	0.79	0.965360
				3812	6,725,198 – 6,725,292	+	4	120	70.34	-2.27	0.62	0.998220
				3813	6,725,198 – 6,725,292	-	4	120	70.34	-2.07	0.58	0.985312
2364	3R_DroMel_CAF1	6,725,340 – 6,725,514	- - - - - - - - -	3814	6,725,340 – 6,725,434	-	3	94	92.20	-2.82	0.89	0.949073
				3815	6,725,366 – 6,725,474	+	4	109	88.72	-1.60	0.75	0.620553
				3816	6,725,366 – 6,725,474	-	4	109	88.72	-2.26	0.90	0.979230
				3817	6,725,395 – 6,725,514	-	4	120	81.23	-2.65	0.82	0.994829
2365	3R_DroMel_CAF1	6,726,742 – 6,726,852	- - - - - - - - -	3818	6,726,742 – 6,726,852	+	5	120	74.80	-2.46	0.48	0.992583
2365	3R_DroMel_CAF1	6,726,742 – 6,726,852	- - - - - - - - -	3819	6,726,742 – 6,726,852	-	5	120	74.80	-1.80	0.39	0.623133
2366	3R_DroMel_CAF1	6,726,886 – 6,726,993	- - - - - - - - -	3820	6,726,886 – 6,726,993	+	5	120	91.50	-1.49	0.80	0.668452
2367	3R_DroMel_CAF1	6,727,756 – 6,727,869	- - - - - - - - -	3821	6,727,756 – 6,727,869	-	4	120	76.37	-1.20	0.85	0.699834
2368	3R_DroMel_CAF1	6,728,350 – 6,728,460	- - - - - - - - -	3822	6,728,350 – 6,728,460	-	5	120	76.81	-1.83	0.61	0.820945
2369	3R_DroMel_CAF1	6,728,719 – 6,728,811	- - - - - - - - -	3823	6,728,719 – 6,728,811	+	5	120	75.70	-2.23	0.46	0.958267
2370	3R_DroMel_CAF1	6,730,016 – 6,730,108	- - - - - - - - -	3824	6,730,016 – 6,730,108	-	5	120	71.73	-1.13	0.67	0.512990
2371	3R_DroMel_CAF1	6,735,087 – 6,735,207	- - - - - - - - -	3825	6,735,087 – 6,735,207	-	3	120	81.67	-1.12	0.85	0.541188
2372	3R_DroMel_CAF1	6,735,372 – 6,735,517	- - - - - - - - -	3826	6,735,372 – 6,735,477	+	3	105	100.00	-1.73	1.00	0.804774
				3827	6,735,372 – 6,735,477	-	3	105	100.00	-2.68	1.00	0.979552
				3828	6,735,397 – 6,735,517	+	3	120	98.06	-1.84	0.93	0.702766
2373	3R_DroMel_CAF1	6,735,794 – 6,735,914	- - - - - - - - -	3829	6,735,794 – 6,735,914	-	3	120	95.54	-2.22	0.99	0.962376
2374	3R_DroMel_CAF1	6,736,273 – 6,736,378	- - - - - - - - -	3830	6,736,273 – 6,736,378	-	3	120	84.79	-1.75	0.82	0.660734
2375	3R_DroMel_CAF1	6,736,612 – 6,736,731	- - - - - - - - -	3831	6,736,612 – 6,736,731	-	3	120	89.68	-1.94	0.80	0.526497
2376	3R_DroMel_CAF1	6,736,771 – 6,737,006	- - - - - - - - -	3832	6,736,771 – 6,736,891	-	3	120	96.11	-1.64	0.99	0.767411
				3833	6,736,851 – 6,736,966	+	3	120	82.40	-2.16	0.60	0.570352
				3834	6,736,851 – 6,736,966	-	3	120	82.40	-2.92	0.70	0.977808
				3835	6,736,891 – 6,737,006	-	3	120	81.84	-2.50	0.59	0.769623
2377	3R_DroMel_CAF1	6,737,362 – 6,737,482	- - - - - - - - -	3836	6,737,362 – 6,737,482	+	3	120	98.89	-1.94	0.87	0.546124
2378	3R_DroMel_CAF1	6,737,682 – 6,737,802	- - - - - - - - -	3837	6,737,682 – 6,737,802	-	3	120	95.56	-2.22	0.96	0.929150
2379	3R_DroMel_CAF1	6,738,324 – 6,738,444	- - - - - - - - -	3838	6,738,324 – 6,738,444	+	3	120	98.89	-1.74	0.97	0.750157
2380	3R_DroMel_CAF1	6,738,590 – 6,738,910	- - - - - - - - -	3839	6,738,590 – 6,738,710	-	3	120	99.44	-2.57	0.99	0.973886
				3840	6,738,630 – 6,738,750	+	3	120	99.44	-1.74	0.98	0.765003
				3841	6,738,630 – 6,738,750	-	3	120	99.44	-2.05	0.98	0.897143
				3842	6,738,670 – 6,738,790	-	3	120	99.44	-1.36	0.99	0.531893
				3843	6,738,710 – 6,738,830	+	3	120	100.00	-1.96	1.00	0.892531
				3844	6,738,710 – 6,738,830	-	3	120	100.00	-1.53	1.00	0.685577
				3845	6,738,790 – 6,738,910	-	3	120	98.89	-1.95	0.97	0.850958
2381	3R_DroMel_CAF1	6,738,950 – 6,739,069	- - - - - - - - -	3846	6,738,950 – 6,739,069	+	3	120	98.33	-1.77	0.96	0.749920
2382	3R_DroMel_CAF1	6,739,389 – 6,739,505	- - - - - - - - -	3847	6,739,389 – 6,739,505	+	3	120	91.09	-2.34	0.74	0.513566
2383	3R_DroMel_CAF1	6,739,585 – 6,739,705	- - - - - - - - -	3848	6,739,585 – 6,739,705	-	3	120	99.44	-1.55	1.00	0.694127
2384	3R_DroMel_CAF1	6,740,065 – 6,740,343	- - - - - - - - -	3849	6,740,065 – 6,740,183	+	3	120	97.22	-1.87	0.93	0.710713
				3850	6,740,143 – 6,740,263	+	3	120	99.44	-1.86	0.97	0.816716
				3851	6,740,223 – 6,740,343	-	3	120	92.57	-1.59	0.92	0.563613
2385	3R_DroMel_CAF1	6,740,892 – 6,741,038	- - - - - - - - -	3852	6,740,892 – 6,741,002	+	4	120	92.42	-2.12	0.87	0.935103
				3853	6,740,892 – 6,741,002	-	4	120	92.42	-2.08	0.91	0.958897
				3854	6,740,932 – 6,741,038	+	4	120	89.47	-2.63	0.82	0.971982
				3855	6,740,932 – 6,741,038	-	4	120	89.47	-2.51	0.84	0.974952
2386	3R_DroMel_CAF1	6,741,654 – 6,741,774	- - - - - - - - -	3856	6,741,654 – 6,741,774	+	4	120	97.92	-2.62	0.95	0.945795
2387	3R_DroMel_CAF1	6,742,471 – 6,742,573	- - - - - - - - -	3857	6,742,471 – 6,742,573	+	4	120	85.14	-2.17	0.80	0.935851
2388	3R_DroMel_CAF1	6,742,690 – 6,742,801	- - - - - - - - -	3858	6,742,690 – 6,742,801	+	4	120	93.22	-1.93	0.87	0.873252
2389	3R_DroMel_CAF1	6,743,110 – 6,743,220	- - - - - - - - -	3859	6,743,110 – 6,743,220	+	4	120	90.54	-2.21	0.83	0.939674
2389	3R_DroMel_CAF1	6,743,110 – 6,743,220	- - - - - - - - -	3860	6,743,110 – 6,743,220	-	4	120	90.54	-2.68	0.90	0.992190
2390	3R_DroMel_CAF1	6,743,300 – 6,743,416	- - - - - - - - -	3861	6,743,300 – 6,743,416	+	4	120	76.98	-1.92	0.60	0.790388
2390	3R_DroMel_CAF1	6,743,300 – 6,743,416	- - - - - - - - -	3862	6,743,300 – 6,743,416	-	4	120	76.98	-2.24	0.50	0.693488
2391	3R_DroMel_CAF1	6,744,853 – 6,745,008	- - - - - - - - -	3863	6,744,853 – 6,744,968	-	3	120	91.45	-2.47	0.76	0.622526
				3864	6,744,893 – 6,745,008	+	3	120	89.14	-2.73	0.77	0.815248
				3865	6,744,893 – 6,745,008	-	3	120	89.14	-3.37	0.72	0.862145
2392	3R_DroMel_CAF1	6,745,048 – 6,745,149	- - - - - - - - -	3866	6,745,048 – 6,745,149	+	3	120	68.33	-2.17	0.61	0.999605
2393	3R_DroMel_CAF1	6,745,375 – 6,745,505	- - - - - - - - -	3867	6,745,375 – 6,745,465	+	3	90	94.81	-2.55	1.00	0.987719
2393	3R_DroMel_CAF1	6,745,375 – 6,745,505	- - - - - - - - -	3868	6,745,385 – 6,745,505	+	3	120	94.72	-2.02	0.94	0.852271
2394	3R_DroMel_CAF1	6,746,714 – 6,746,830	- - - - - - - - -	3869	6,746,714 – 6,746,830	+	4	120	97.88	-2.65	0.86	0.784693
2394	3R_DroMel_CAF1	6,746,714 – 6,746,830	- - - - - - - - -	3870	6,746,714 – 6,746,830	-	4	120	97.88	-2.48	0.94	0.932046
2395	3R_DroMel_CAF1	6,747,605 – 6,747,866	- - - - - - - - -	3871	6,747,605 – 6,747,721	+	4	120	92.23	-2.05	0.79	0.778456
				3872	6,747,641 – 6,747,748	+	4	120	89.72	-2.62	0.87	0.986428
				3873	6,747,641 – 6,747,748	-	4	120	89.72	-2.28	0.87	0.970906
				3874	6,747,681 – 6,747,788	-	4	120	90.16	-2.71	0.71	0.806903
				3875	6,747,748 – 6,747,866	+	4	120	92.72	-1.87	0.86	0.843905
2396	3R_DroMel_CAF1	6,748,163 – 6,748,472	- - - - - - - - -	3876	6,748,163 – 6,748,278	+	4	120	94.33	-2.57	0.85	0.944558
				3877	6,748,238 – 6,748,358	+	4	120	96.39	-3.55	0.94	0.983715
				3878	6,748,238 – 6,748,358	-	4	120	96.39	-2.45	0.91	0.948886
				3879	6,748,278 – 6,748,392	+	4	120	84.15	-3.01	0.75	0.992650
				3880	6,748,278 – 6,748,392	-	4	120	84.15	-2.86	0.69	0.977988
				3881	6,748,318 – 6,748,432	+	4	120	80.82	-3.47	0.70	0.999253
				3882	6,748,318 – 6,748,432	-	4	120	80.82	-2.76	0.64	0.988644
				3883	6,748,358 – 6,748,472	+	4	120	84.09	-1.45	0.81	0.545971
2397	3R_DroMel_CAF1	6,748,742 – 6,748,861	- - - - - - - - -	3884	6,748,742 – 6,748,861	-	4	120	91.90	-1.64	0.84	0.712802
2398	3R_DroMel_CAF1	6,749,210 – 6,749,325	- - - - - - - - -	3885	6,749,210 – 6,749,325	-	4	120	95.74	-1.48	0.97	0.650864
2399	3R_DroMel_CAF1	6,749,537 – 6,749,737	- - - - - - - - -	3886	6,749,537 – 6,749,657	-	4	120	93.47	-1.67	0.85	0.685080
2399	3R_DroMel_CAF1	6,749,537 – 6,749,737	- - - - - - - - -	3887	6,749,617 – 6,749,737	-	3	120	90.34	-3.27	0.64	0.553551
2400	3R_DroMel_CAF1	6,750,236 – 6,750,494	- - - - - - - - -	3888	6,750,236 – 6,750,349	+	4	120	94.13	-2.02	0.76	0.522313
				3889	6,750,349 – 6,750,454	-	4	120	88.44	-4.98	0.66	0.780564
				3890	6,750,389 – 6,750,494	-	4	120	86.67	-3.01	0.62	0.828196
2401	3R_DroMel_CAF1	6,751,364 – 6,751,483	- - - - - - - - -	3891	6,751,364 – 6,751,483	+	4	120	95.14	-1.73	0.90	0.756952
2401	3R_DroMel_CAF1	6,751,364 – 6,751,483	- - - - - - - - -	3892	6,751,364 – 6,751,483	-	4	120	95.14	-1.87	0.85	0.729830
2402	3R_DroMel_CAF1	6,752,412 – 6,752,557	- - - - - - - - -	3893	6,752,412 – 6,752,523	+	5	120	94.24	-2.25	0.83	0.985872
				3894	6,752,412 – 6,752,523	-	5	120	94.24	-1.59	0.86	0.912427
				3895	6,752,452 – 6,752,557	+	5	120	90.63	-2.01	0.74	0.758504
2403	3R_DroMel_CAF1	6,753,125 – 6,753,313	- - - - - - - - -	3896	6,753,125 – 6,753,245	+	5	120	99.33	-2.04	0.98	0.995152
				3897	6,753,165 – 6,753,279	+	5	120	95.07	-1.35	0.89	0.803477
				3898	6,753,165 – 6,753,279	-	5	120	95.07	-1.43	0.96	0.963271
				3899	6,753,205 – 6,753,313	+	5	120	87.42	-2.11	0.66	0.574552
				3900	6,753,205 – 6,753,313	-	5	120	87.42	-1.53	0.80	0.627790
2404	3R_DroMel_CAF1	6,753,608 – 6,753,718	- - - - - - - - -	3901	6,753,608 – 6,753,718	-	3	117	93.60	-1.59	0.94	0.607703
2405	3R_DroMel_CAF1	6,754,012 – 6,754,194	- - "RNAmicro=f:6754012_t:6754131_strand:+_p:0.642774" - - - - - -	3902	6,754,012 – 6,754,118	+	5	120	89.15	-3.80	0.92	0.999973
				3903	6,754,012 – 6,754,118	-	5	120	89.15	-1.84	0.92	0.985353
				3904	6,754,092 – 6,754,194	-	4	114	90.70	-2.66	0.73	0.836534
2406	3R_DroMel_CAF1	6,754,234 – 6,754,423	- - - - - - - - -	3905	6,754,234 – 6,754,343	+	5	120	92.29	-2.90	0.85	0.999306
				3906	6,754,234 – 6,754,343	-	5	120	92.29	-2.53	0.74	0.878339
				3907	6,754,303 – 6,754,423	+	5	120	99.50	-1.83	0.99	0.983175
2407	3R_DroMel_CAF1	6,755,944 – 6,756,058	- - - - - - - - -	3908	6,755,944 – 6,756,058	+	5	120	96.31	-1.11	0.97	0.654135
2408	3R_DroMel_CAF1	6,756,253 – 6,756,402	- - - - - - - - -	3909	6,756,253 – 6,756,364	+	4	111	94.44	-1.69	1.00	0.902236
				3910	6,756,253 – 6,756,364	-	4	111	94.44	-2.46	0.98	0.991379
				3911	6,756,293 – 6,756,402	+	4	111	88.29	-1.91	0.86	0.900071
				3912	6,756,293 – 6,756,402	-	4	111	88.29	-2.00	0.75	0.815227
2409	3R_DroMel_CAF1	6,756,555 – 6,756,674	- - - - - - - - -	3913	6,756,555 – 6,756,674	+	3	119	84.06	-1.56	0.79	0.506904
2409	3R_DroMel_CAF1	6,756,555 – 6,756,674	- - - - - - - - -	3914	6,756,555 – 6,756,674	-	3	119	84.06	-1.66	0.78	0.573081
2410	3R_DroMel_CAF1	6,756,929 – 6,757,117	- - - - - - - - -	3915	6,756,929 – 6,757,048	+	5	120	97.16	-2.37	0.96	0.999696
				3916	6,756,929 – 6,757,048	-	5	120	97.16	-3.34	0.99	0.999979
				3917	6,756,969 – 6,757,077	-	5	120	92.33	-1.38	0.83	0.643925
				3918	6,757,008 – 6,757,117	+	5	120	93.74	-1.94	0.84	0.974354
				3919	6,757,008 – 6,757,117	-	5	120	93.74	-2.57	0.91	0.999822
2411	3R_DroMel_CAF1	6,757,429 – 6,757,549	- - - - - - - - -	3920	6,757,429 – 6,757,549	+	5	120	96.00	-1.37	0.97	0.939859
2412	3R_DroMel_CAF1	6,757,659 – 6,757,858	- - - - - - - - -	3921	6,757,659 – 6,757,779	+	5	120	98.00	-1.33	0.90	0.593740
2412	3R_DroMel_CAF1	6,757,659 – 6,757,858	- - - - - - - - -	3922	6,757,739 – 6,757,858	+	4	120	82.05	-3.01	0.79	0.997512
2413	3R_DroMel_CAF1	6,759,671 – 6,759,775	- - - - - - - - -	3923	6,759,671 – 6,759,775	+	5	120	79.67	-1.73	0.61	0.598719
2413	3R_DroMel_CAF1	6,759,671 – 6,759,775	- - - - - - - - -	3924	6,759,671 – 6,759,775	-	5	120	79.67	-1.87	0.54	0.565416
2414	3R_DroMel_CAF1	6,759,855 – 6,759,960	- - - - - - - - -	3925	6,759,855 – 6,759,960	+	3	112	93.13	-1.80	0.88	0.558758
2415	3R_DroMel_CAF1	6,760,588 – 6,760,726	- - - - - - - - -	3926	6,760,588 – 6,760,686	+	5	120	84.34	-3.96	0.71	0.997659
				3927	6,760,588 – 6,760,686	-	5	120	84.34	-2.06	0.60	0.563415
				3928	6,760,628 – 6,760,726	+	5	120	85.53	-1.97	0.77	0.860398
2416	3R_DroMel_CAF1	6,761,061 – 6,761,162	- - - - - - - - -	3929	6,761,061 – 6,761,162	+	3	102	78.72	-3.48	0.58	0.995674
2416	3R_DroMel_CAF1	6,761,061 – 6,761,162	- - - - - - - - -	3930	6,761,061 – 6,761,162	-	3	102	78.72	-3.08	0.67	0.998369
2417	3R_DroMel_CAF1	6,761,282 – 6,761,399	- - - - - - - - -	3931	6,761,282 – 6,761,399	+	5	120	94.88	-1.34	0.86	0.680369
2418	3R_DroMel_CAF1	6,761,664 – 6,761,844	- - - - - - - - -	3932	6,761,664 – 6,761,784	+	5	120	96.25	-1.96	0.89	0.990725
				3933	6,761,704 – 6,761,818	+	5	120	94.76	-2.55	0.88	0.999206
				3934	6,761,704 – 6,761,818	-	5	120	94.76	-2.08	0.92	0.998544
				3935	6,761,744 – 6,761,844	-	5	120	87.05	-1.45	0.78	0.500000
2419	3R_DroMel_CAF1	6,762,354 – 6,762,548	- - - - - - - - -	3936	6,762,354 – 6,762,472	-	5	120	96.82	-2.75	0.84	0.994409
				3937	6,762,394 – 6,762,512	+	5	120	95.06	-2.00	0.89	0.994263
				3938	6,762,394 – 6,762,512	-	5	120	95.06	-2.94	0.85	0.998881
				3939	6,762,432 – 6,762,548	-	5	120	85.24	-1.96	0.70	0.729218
2420	3R_DroMel_CAF1	6,762,628 – 6,762,740	- - - - - - - - -	3940	6,762,628 – 6,762,740	-	5	120	90.62	-1.26	0.94	0.767791
2421	3R_DroMel_CAF1	6,762,885 – 6,763,106	- - - - - - - - -	3941	6,762,885 – 6,762,986	-	3	118	81.36	-1.93	0.76	0.847118
				3942	6,762,925 – 6,763,026	+	3	118	83.62	-1.67	0.76	0.569971
				3943	6,762,925 – 6,763,026	-	3	118	83.62	-2.70	0.76	0.954844
				3944	6,762,963 – 6,763,066	-	5	120	79.01	-1.77	0.66	0.771553
				3945	6,762,986 – 6,763,106	-	5	120	94.33	-1.55	0.89	0.938798
2422	3R_DroMel_CAF1	6,763,178 – 6,763,338	- - - - - - - - -	3946	6,763,178 – 6,763,298	-	5	120	94.92	-1.96	0.94	0.998501
2422	3R_DroMel_CAF1	6,763,178 – 6,763,338	- - - - - - - - -	3947	6,763,218 – 6,763,338	+	5	120	95.67	-1.63	0.89	0.955961
2423	3R_DroMel_CAF1	6,764,373 – 6,764,573	- - - - - - - - -	3948	6,764,373 – 6,764,493	+	5	120	95.67	-1.89	0.93	0.996400
				3949	6,764,413 – 6,764,533	-	5	120	97.83	-1.15	0.96	0.566569
				3950	6,764,453 – 6,764,573	-	5	120	88.23	-1.77	0.78	0.780179
2424	3R_DroMel_CAF1	6,764,612 – 6,764,726	- - - - - - - - -	3951	6,764,612 – 6,764,726	+	5	120	89.78	-2.06	0.85	0.983108
2425	3R_DroMel_CAF1	6,764,956 – 6,765,269	- - - - - - - - -	3952	6,764,956 – 6,765,076	-	5	120	93.42	-1.35	0.85	0.660672
				3953	6,764,996 – 6,765,116	-	5	120	93.08	-1.54	0.80	0.663764
				3954	6,765,116 – 6,765,229	+	5	120	94.99	-2.46	0.94	0.999879
				3955	6,765,116 – 6,765,229	-	5	120	94.99	-2.34	0.94	0.999809
				3956	6,765,149 – 6,765,269	-	5	120	97.00	-1.27	0.94	0.776732
2426	3R_DroMel_CAF1	6,765,939 – 6,766,099	- - - - - - - - -	3957	6,765,939 – 6,766,059	-	5	120	95.00	-1.51	0.84	0.745124
2426	3R_DroMel_CAF1	6,765,939 – 6,766,099	- - - - - - - - -	3958	6,765,979 – 6,766,099	+	5	120	94.17	-1.45	0.81	0.556958
2427	3R_DroMel_CAF1	6,767,385 – 6,767,497	- - - - - - - - -	3959	6,767,385 – 6,767,497	+	5	120	93.04	-1.48	0.87	0.875977
2428	3R_DroMel_CAF1	6,767,760 – 6,767,864	- - - - - - - - -	3960	6,767,760 – 6,767,864	+	5	120	90.03	-1.39	0.84	0.661056
2429	3R_DroMel_CAF1	6,768,882 – 6,768,991	- - - - - - - - -	3961	6,768,882 – 6,768,991	+	5	120	86.69	-1.74	0.82	0.811626
2429	3R_DroMel_CAF1	6,768,882 – 6,768,991	- - - - - - - - -	3962	6,768,882 – 6,768,991	-	5	120	86.69	-2.15	0.80	0.947407
2430	3R_DroMel_CAF1	6,769,265 – 6,769,362	- - - - - - - - -	3963	6,769,265 – 6,769,362	-	3	120	82.50	-1.45	0.81	0.559947
2431	3R_DroMel_CAF1	6,769,472 – 6,769,616	- - - - - - - - -	3964	6,769,472 – 6,769,576	+	4	120	82.73	-2.52	0.78	0.984588
2431	3R_DroMel_CAF1	6,769,472 – 6,769,616	- - - - - - - - -	3965	6,769,509 – 6,769,616	+	4	120	84.40	-1.88	0.69	0.759099
2432	3R_DroMel_CAF1	6,769,769 – 6,769,953	- - - - - - - - -	3966	6,769,769 – 6,769,873	+	3	104	100.00	-1.81	1.00	0.842254
				3967	6,769,795 – 6,769,913	+	3	118	100.00	-1.33	1.00	0.537635
				3968	6,769,833 – 6,769,953	-	5	120	99.33	-1.69	0.98	0.962532
2433	3R_DroMel_CAF1	6,770,950 – 6,771,063	- - - - - - - - -	3969	6,770,950 – 6,771,063	+	5	120	93.52	-1.53	0.95	0.981261
2434	3R_DroMel_CAF1	6,771,087 – 6,771,206	- - - - - - - - -	3970	6,771,087 – 6,771,206	+	5	120	94.14	-2.01	0.91	0.997398
2434	3R_DroMel_CAF1	6,771,087 – 6,771,206	- - - - - - - - -	3971	6,771,087 – 6,771,206	-	5	120	94.14	-1.66	0.93	0.987206
2435	3R_DroMel_CAF1	6,771,639 – 6,771,799	- - - - - - - - -	3972	6,771,639 – 6,771,759	+	5	120	99.67	-1.45	0.96	0.789406
				3973	6,771,639 – 6,771,759	-	5	120	99.67	-2.04	1.00	0.994414
				3974	6,771,679 – 6,771,799	-	5	120	97.62	-1.65	1.00	0.989073
2436	3R_DroMel_CAF1	6,772,563 – 6,772,654	- - - - - - - - -	3975	6,772,563 – 6,772,654	+	4	101	83.13	-2.04	0.63	0.759809
2436	3R_DroMel_CAF1	6,772,563 – 6,772,654	- - - - - - - - -	3976	6,772,563 – 6,772,654	-	4	101	83.13	-1.77	0.78	0.780204
2437	3R_DroMel_CAF1	6,772,675 – 6,772,904	- - - - - - - - -	3977	6,772,675 – 6,772,795	-	4	120	97.36	-1.51	1.00	0.580831
				3978	6,772,715 – 6,772,826	+	4	120	95.09	-2.89	0.78	0.720500
				3979	6,772,755 – 6,772,865	-	4	120	90.51	-1.38	0.81	0.500000
				3980	6,772,795 – 6,772,904	-	4	120	88.71	-1.83	0.66	0.500000
2438	3R_DroMel_CAF1	6,773,054 – 6,773,156	- - - - - - - - -	3981	6,773,054 – 6,773,156	+	4	120	79.22	-2.81	0.47	0.797219
2439	3R_DroMel_CAF1	6,773,196 – 6,773,353	- - - - - - - - -	3982	6,773,196 – 6,773,313	-	4	120	91.23	-1.99	0.79	0.794565
				3983	6,773,236 – 6,773,353	+	4	120	88.40	-1.61	0.72	0.595795
				3984	6,773,236 – 6,773,353	-	4	120	88.40	-2.07	0.74	0.821431
2440	3R_DroMel_CAF1	6,773,957 – 6,774,063	- - - - - - - - -	3985	6,773,957 – 6,774,063	+	4	120	83.74	-1.76	0.66	0.643487
2441	3R_DroMel_CAF1	6,774,103 – 6,774,204	- - - - - - - - -	3986	6,774,103 – 6,774,204	-	5	120	81.06	-2.65	0.66	0.981518
2442	3R_DroMel_CAF1	6,774,244 – 6,774,359	- - - - - - - - -	3987	6,774,244 – 6,774,359	+	5	120	95.53	-1.38	0.84	0.589036
2443	3R_DroMel_CAF1	6,774,826 – 6,774,945	- - - - - - - - -	3988	6,774,826 – 6,774,945	-	5	120	97.49	-1.32	0.94	0.812675
2444	3R_DroMel_CAF1	6,775,080 – 6,775,192	- - - - - - - - -	3989	6,775,080 – 6,775,192	+	5	120	93.70	-1.89	0.80	0.878657
2445	3R_DroMel_CAF1	6,775,344 – 6,775,464	- - - - - - - - -	3990	6,775,344 – 6,775,464	+	5	120	97.67	-1.41	0.88	0.680014
2446	3R_DroMel_CAF1	6,775,584 – 6,775,771	- - - - - - - - -	3991	6,775,584 – 6,775,691	-	5	120	86.48	-1.42	0.82	0.500000
				3992	6,775,611 – 6,775,731	+	5	120	92.74	-1.44	0.83	0.701688
				3993	6,775,651 – 6,775,771	+	5	120	93.41	-1.87	0.87	0.984561
2447	3R_DroMel_CAF1	6,776,886 – 6,777,006	- - - "knownCDS=Parent=FBtr0082326;Name=CG4683-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4683-RA" - - - - -	3994	6,776,886 – 6,777,006	+	6	120	81.67	-1.69	0.63	0.568759
2448	3R_DroMel_CAF1	6,777,618 – 6,777,918	- - "RNAmicro=f:6777720_t:6777839_strand:-_p:0.654184" - - - - - -	3995	6,777,618 – 6,777,720	-	5	120	79.67	-1.83	0.71	0.838350
				3996	6,777,680 – 6,777,776	-	5	120	86.41	-2.03	0.71	0.770232
				3997	6,777,720 – 6,777,816	+	5	120	86.41	-2.61	0.84	0.995003
				3998	6,777,720 – 6,777,816	-	5	120	86.41	-3.53	0.81	0.998938
				3999	6,777,745 – 6,777,855	+	5	120	88.92	-2.17	0.74	0.843982
				4000	6,777,745 – 6,777,855	-	5	120	88.92	-3.17	0.81	0.998445
				4001	6,777,816 – 6,777,918	-	5	103	88.77	-2.59	0.64	0.528901
2449	3R_DroMel_CAF1	6,777,947 – 6,778,167	- - - - - - - - -	4002	6,777,947 – 6,778,065	+	5	120	96.95	-2.05	0.83	0.918216
				4003	6,777,947 – 6,778,065	-	5	120	96.95	-2.51	0.90	0.998909
				4004	6,778,025 – 6,778,127	+	4	114	89.58	-1.67	0.90	0.839476
				4005	6,778,025 – 6,778,127	-	4	114	89.58	-1.36	0.85	0.530290
				4006	6,778,065 – 6,778,167	+	4	114	90.62	-1.65	0.80	0.679509
				4007	6,778,065 – 6,778,167	-	4	114	90.62	-1.46	0.87	0.638798
2450	3R_DroMel_CAF1	6,779,018 – 6,779,175	- - - - - - - - -	4008	6,779,018 – 6,779,135	+	5	120	90.22	-1.48	0.79	0.605461
				4009	6,779,058 – 6,779,175	+	5	120	92.01	-2.92	0.87	0.999671
				4010	6,779,058 – 6,779,175	-	5	120	92.01	-1.54	0.76	0.500000
2451	3R_DroMel_CAF1	6,779,534 – 6,779,688	- - - - - - - - -	4011	6,779,534 – 6,779,648	+	5	120	95.88	-3.51	0.95	0.999978
				4012	6,779,534 – 6,779,648	-	5	120	95.88	-3.38	0.89	0.999841
				4013	6,779,574 – 6,779,688	+	6	120	84.37	-1.98	0.75	0.614383
				4014	6,779,574 – 6,779,688	-	6	120	84.37	-3.05	0.77	0.887744
2452	3R_DroMel_CAF1	6,780,357 – 6,780,494	- - - - - - - - -	4015	6,780,357 – 6,780,461	-	6	120	91.59	-2.50	0.86	0.969023
2452	3R_DroMel_CAF1	6,780,357 – 6,780,494	- - - - - - - - -	4016	6,780,381 – 6,780,494	-	6	115	93.72	-1.83	0.82	0.500000
2453	3R_DroMel_CAF1	6,781,439 – 6,781,529	- - - - - - - - -	4017	6,781,439 – 6,781,529	-	5	103	83.33	-1.70	0.72	0.633262
2454	3R_DroMel_CAF1	6,781,606 – 6,781,699	- - - - - - - - -	4018	6,781,606 – 6,781,699	+	6	99	90.32	-2.32	0.83	0.853946
2454	3R_DroMel_CAF1	6,781,606 – 6,781,699	- - - - - - - - -	4019	6,781,606 – 6,781,699	-	6	99	90.32	-1.77	0.87	0.820787
2455	3R_DroMel_CAF1	6,782,001 – 6,782,120	- - - - - - - - -	4020	6,782,001 – 6,782,120	+	6	120	95.92	-1.29	0.89	0.664034
2456	3R_DroMel_CAF1	6,790,984 – 6,791,104	- - - - - - - - -	4021	6,790,984 – 6,791,104	+	5	120	93.58	-1.49	0.89	0.919107
2456	3R_DroMel_CAF1	6,790,984 – 6,791,104	- - - - - - - - -	4022	6,790,984 – 6,791,104	-	5	120	93.58	-2.34	0.82	0.985539
2457	3R_DroMel_CAF1	6,791,967 – 6,792,077	- - - - - - - - -	4023	6,791,967 – 6,792,077	-	5	120	87.14	-3.35	0.59	0.767634
2458	3R_DroMel_CAF1	6,792,434 – 6,792,534	- - - - - - - - -	4024	6,792,434 – 6,792,534	-	5	119	88.57	-1.81	0.75	0.717378
2459	3R_DroMel_CAF1	6,793,127 – 6,793,237	- - - - - - - - -	4025	6,793,127 – 6,793,237	+	6	119	81.95	-1.20	0.77	0.500000
2460	3R_DroMel_CAF1	6,793,862 – 6,793,972	- - - - - - - - -	4026	6,793,862 – 6,793,972	-	5	114	84.53	-2.52	0.68	0.922927
2461	3R_DroMel_CAF1	6,794,195 – 6,794,291	- - - - - - - - -	4027	6,794,195 – 6,794,291	-	6	120	84.94	-2.31	0.74	0.629559
2462	3R_DroMel_CAF1	6,794,780 – 6,794,900	- - - - - - - - -	4028	6,794,780 – 6,794,900	-	6	120	83.89	-2.56	0.63	0.571299
2463	3R_DroMel_CAF1	6,796,900 – 6,797,088	- - - - - - - - -	4029	6,796,900 – 6,797,020	+	5	120	97.49	-1.56	0.95	0.960636
				4030	6,796,900 – 6,797,020	-	5	120	97.49	-2.98	0.94	0.999888
				4031	6,796,940 – 6,797,059	+	5	120	94.39	-2.23	0.92	0.999351
				4032	6,796,940 – 6,797,059	-	5	120	94.39	-3.62	0.89	0.999920
				4033	6,796,980 – 6,797,088	-	5	120	82.24	-2.15	0.77	0.934449
2464	3R_DroMel_CAF1	6,797,875 – 6,797,970	- - - - - - - - -	4034	6,797,875 – 6,797,970	+	5	95	90.02	-2.47	0.67	0.579065
2464	3R_DroMel_CAF1	6,797,875 – 6,797,970	- - - - - - - - -	4035	6,797,875 – 6,797,970	-	5	95	90.02	-1.99	0.76	0.834975
2465	3R_DroMel_CAF1	6,798,539 – 6,798,717	- - - - - - - - -	4036	6,798,539 – 6,798,642	+	4	109	93.70	-1.95	0.90	0.915021
				4037	6,798,539 – 6,798,642	-	4	109	93.70	-1.45	1.00	0.774693
				4038	6,798,602 – 6,798,717	-	6	120	93.20	-2.05	0.90	0.986856
2466	3R_DroMel_CAF1	6,799,715 – 6,799,831	- - - - - - - - -	4039	6,799,715 – 6,799,831	+	5	118	96.32	-2.19	0.99	0.999755
2467	3R_DroMel_CAF1	6,800,144 – 6,800,243	- - - - - - - - -	4040	6,800,144 – 6,800,243	+	6	120	81.26	-1.59	0.67	0.648247
2468	3R_DroMel_CAF1	6,800,411 – 6,800,570	- - - - - - - - -	4041	6,800,411 – 6,800,530	+	6	120	98.55	-1.04	0.91	0.500000
				4042	6,800,411 – 6,800,530	-	6	120	98.55	-1.03	1.00	0.953179
				4043	6,800,451 – 6,800,570	-	6	120	97.99	-1.14	0.91	0.684809
2469	3R_DroMel_CAF1	6,801,244 – 6,801,398	- - - - - - - - -	4044	6,801,244 – 6,801,358	+	5	120	89.26	-1.69	0.74	0.608659
				4045	6,801,278 – 6,801,398	+	5	120	93.83	-1.94	0.88	0.992005
				4046	6,801,278 – 6,801,398	-	5	120	93.83	-1.84	0.88	0.987247
2470	3R_DroMel_CAF1	6,802,654 – 6,802,774	- - - - - - - - -	4047	6,802,654 – 6,802,774	+	6	120	98.44	-1.05	0.96	0.866196
2470	3R_DroMel_CAF1	6,802,654 – 6,802,774	- - - - - - - - -	4048	6,802,654 – 6,802,774	-	6	120	98.44	-1.24	0.91	0.785959
2471	3R_DroMel_CAF1	6,803,922 – 6,804,029	- - - - - - - - -	4049	6,803,922 – 6,804,029	+	5	107	97.01	-1.84	0.89	0.978377
2472	3R_DroMel_CAF1	6,804,908 – 6,805,056	- - - - - - - - -	4050	6,804,908 – 6,805,027	+	6	120	89.05	-2.20	0.83	0.820722
				4051	6,804,948 – 6,805,056	+	5	108	94.90	-1.63	0.94	0.988465
				4052	6,804,948 – 6,805,056	-	5	108	94.90	-1.32	0.83	0.522858
2473	3R_DroMel_CAF1	6,806,150 – 6,806,246	- - - - - - - - -	4053	6,806,150 – 6,806,246	+	6	120	72.50	-1.61	0.49	0.541903
2474	3R_DroMel_CAF1	6,806,394 – 6,806,608	- - - - - - - - -	4054	6,806,394 – 6,806,502	-	6	120	81.68	-2.31	0.54	0.581773
2474	3R_DroMel_CAF1	6,806,394 – 6,806,608	- - - - - - - - -	4055	6,806,502 – 6,806,608	-	5	118	87.78	-2.38	0.63	0.518868
2475	3R_DroMel_CAF1	6,807,437 – 6,807,549	- - - - - - - - -	4056	6,807,437 – 6,807,549	-	4	112	91.07	-1.67	0.73	0.500000
2476	3R_DroMel_CAF1	6,807,625 – 6,807,743	- - - - - - - - -	4057	6,807,625 – 6,807,743	-	6	120	83.31	-1.62	0.70	0.515991
2477	3R_DroMel_CAF1	6,808,282 – 6,808,387	- - - - - - - - -	4058	6,808,282 – 6,808,387	+	5	119	87.01	-2.51	0.79	0.983366
2477	3R_DroMel_CAF1	6,808,282 – 6,808,387	- - - - - - - - -	4059	6,808,282 – 6,808,387	-	5	119	87.01	-1.79	0.80	0.812530
2478	3R_DroMel_CAF1	6,809,412 – 6,809,525	- - - - - - - - -	4060	6,809,412 – 6,809,525	-	6	120	83.18	-2.25	0.65	0.625633
2479	3R_DroMel_CAF1	6,809,612 – 6,809,727	- - - - - - - - -	4061	6,809,612 – 6,809,727	+	5	115	98.78	-1.61	0.92	0.897954
2480	3R_DroMel_CAF1	6,812,655 – 6,812,750	- - - - - - - - -	4062	6,812,655 – 6,812,750	+	4	97	95.83	-2.42	0.90	0.947255
2481	3R_DroMel_CAF1	6,813,868 – 6,813,985	- - - - - - - - -	4063	6,813,868 – 6,813,985	-	6	120	93.16	-2.81	0.89	0.998502
2482	3R_DroMel_CAF1	6,814,239 – 6,814,347	- - - - - - - - -	4064	6,814,239 – 6,814,347	+	6	120	89.13	-2.15	0.80	0.618013
2483	3R_DroMel_CAF1	6,815,007 – 6,815,127	- - - - - - - - -	4065	6,815,007 – 6,815,127	+	5	120	92.00	-1.26	0.85	0.561569
2484	3R_DroMel_CAF1	6,815,514 – 6,815,622	- - - - - - - - -	4066	6,815,514 – 6,815,622	-	5	120	76.11	-2.09	0.42	0.887125
2485	3R_DroMel_CAF1	6,815,660 – 6,815,809	- - - - - - - - -	4067	6,815,660 – 6,815,769	+	4	114	96.86	-2.56	0.87	0.889252
				4068	6,815,689 – 6,815,809	+	5	120	95.33	-1.62	0.97	0.992013
				4069	6,815,689 – 6,815,809	-	5	120	95.33	-1.47	0.92	0.938342
2486	3R_DroMel_CAF1	6,816,658 – 6,816,766	- - - - - - - - -	4070	6,816,658 – 6,816,766	+	5	115	93.58	-1.44	0.88	0.872925
2487	3R_DroMel_CAF1	6,817,742 – 6,817,989	- - - - - - - - -	4071	6,817,742 – 6,817,845	+	5	119	90.63	-3.44	0.88	0.999921
				4072	6,817,742 – 6,817,845	-	5	119	90.63	-3.12	0.79	0.996038
				4073	6,817,805 – 6,817,925	+	6	120	98.28	-1.17	0.99	0.971260
				4074	6,817,885 – 6,817,989	+	6	120	82.17	-1.95	0.65	0.649840
2488	3R_DroMel_CAF1	6,818,843 – 6,819,000	- - - - - - - - -	4075	6,818,843 – 6,818,960	-	5	120	95.09	-1.48	0.96	0.976018
				4076	6,818,883 – 6,819,000	+	5	120	94.59	-1.86	0.78	0.711055
				4077	6,818,883 – 6,819,000	-	5	120	94.59	-1.56	0.92	0.970567
2489	3R_DroMel_CAF1	6,820,107 – 6,820,221	- - - "knownCDS=texon3330;Parent=CG_NCBI_GNO_32189866, CG_DGIL_SNO_28364469" - - - - -	4078	6,820,107 – 6,820,221	+	5	120	84.88	-1.78	0.72	0.669335
2490	3R_DroMel_CAF1	6,821,205 – 6,821,396	- - - - - - - - -	4079	6,821,205 – 6,821,317	+	6	120	86.34	-2.15	0.76	0.519812
2490	3R_DroMel_CAF1	6,821,205 – 6,821,396	- - - - - - - - -	4080	6,821,277 – 6,821,396	+	5	119	94.71	-1.83	0.90	0.990930
2491	3R_DroMel_CAF1	6,823,926 – 6,824,044	- - - - - - - - -	4081	6,823,926 – 6,824,044	+	5	118	93.05	-1.05	0.94	0.500000
2492	3R_DroMel_CAF1	6,824,876 – 6,824,994	- - - - - - - - -	4082	6,824,876 – 6,824,994	+	6	120	81.80	-2.41	0.53	0.591581
2493	3R_DroMel_CAF1	6,826,080 – 6,826,187	- - - - - - - - -	4083	6,826,080 – 6,826,187	-	6	120	85.42	-1.78	0.79	0.559023
2494	3R_DroMel_CAF1	6,826,302 – 6,826,471	- - - - - - - - -	4084	6,826,302 – 6,826,392	+	6	98	86.99	-3.48	0.71	0.692055
				4085	6,826,302 – 6,826,392	-	6	98	86.99	-2.65	0.86	0.959558
				4086	6,826,368 – 6,826,471	+	6	112	86.62	-2.21	0.76	0.518508
2495	3R_DroMel_CAF1	6,827,161 – 6,827,377	- - - - - - - - -	4087	6,827,161 – 6,827,265	-	6	120	92.10	-1.24	0.93	0.847882
				4088	6,827,185 – 6,827,303	+	6	120	97.27	-1.04	0.91	0.535897
				4089	6,827,185 – 6,827,303	-	6	120	97.27	-1.75	1.02	0.999686
				4090	6,827,225 – 6,827,343	-	6	120	97.27	-1.74	0.96	0.997129
				4091	6,827,265 – 6,827,377	-	6	120	90.07	-2.05	0.81	0.598092
2496	3R_DroMel_CAF1	6,827,563 – 6,827,682	- - - - - - - - -	4092	6,827,563 – 6,827,682	-	3	119	98.32	-2.30	0.89	0.793768
2497	3R_DroMel_CAF1	6,828,680 – 6,828,838	- - - - - - - - -	4093	6,828,680 – 6,828,799	-	6	120	97.82	-1.69	0.85	0.683271
2497	3R_DroMel_CAF1	6,828,680 – 6,828,838	- - - - - - - - -	4094	6,828,720 – 6,828,838	+	6	120	94.72	-1.62	0.86	0.699111
2498	3R_DroMel_CAF1	6,829,326 – 6,829,523	- - - - - - - - -	4095	6,829,326 – 6,829,418	+	6	120	80.72	-1.60	0.65	0.640669
				4096	6,829,379 – 6,829,483	-	5	108	84.36	-1.83	0.65	0.565011
				4097	6,829,418 – 6,829,523	+	6	120	77.97	-1.81	0.54	0.651176
2499	3R_DroMel_CAF1	6,830,173 – 6,830,265	- - - - - - - - -	4098	6,830,173 – 6,830,265	-	6	120	84.12	-2.05	0.72	0.595735
2500	3R_DroMel_CAF1	6,833,157 – 6,833,340	- - - - - - - - -	4099	6,833,157 – 6,833,271	-	5	119	95.34	-1.40	0.87	0.779586
2500	3R_DroMel_CAF1	6,833,157 – 6,833,340	- - - - - - - - -	4100	6,833,231 – 6,833,340	-	5	120	84.89	-2.34	0.71	0.911609
2501	3R_DroMel_CAF1	6,833,897 – 6,834,015	- - - - - - - - -	4101	6,833,897 – 6,834,015	-	5	120	87.83	-2.13	0.69	0.708846
2502	3R_DroMel_CAF1	6,834,900 – 6,835,001	- - - - - - - - -	4102	6,834,900 – 6,835,001	-	5	120	75.87	-2.08	0.21	0.939611
2503	3R_DroMel_CAF1	6,835,659 – 6,835,752	- - - - - - - - -	4103	6,835,659 – 6,835,752	-	6	120	82.83	-2.92	0.66	0.835488
2504	3R_DroMel_CAF1	6,835,985 – 6,836,243	- - - - - - - - -	4104	6,835,985 – 6,836,098	-	6	115	98.59	-2.32	0.94	0.999138
				4105	6,836,018 – 6,836,136	-	6	120	98.43	-1.74	0.94	0.992210
				4106	6,836,136 – 6,836,243	+	5	120	82.33	-2.37	0.71	0.953669
2505	3R_DroMel_CAF1	6,838,080 – 6,838,176	- - - - - - - - -	4107	6,838,080 – 6,838,176	-	4	96	83.77	-1.47	0.69	0.500000
2506	3R_DroMel_CAF1	6,841,085 – 6,841,177	- - - - - - - - -	4108	6,841,085 – 6,841,177	-	6	97	82.87	-1.96	0.63	0.527273
2507	3R_DroMel_CAF1	6,841,503 – 6,841,604	- - - - - - - - -	4109	6,841,503 – 6,841,604	+	6	114	82.57	-2.62	0.62	0.756621
2508	3R_DroMel_CAF1	6,842,225 – 6,842,357	- - - - - - - - -	4110	6,842,225 – 6,842,322	+	6	107	85.55	-3.67	0.74	0.900418
2508	3R_DroMel_CAF1	6,842,225 – 6,842,357	- - - - - - - - -	4111	6,842,260 – 6,842,357	+	6	118	81.22	-2.12	0.57	0.629443
2509	3R_DroMel_CAF1	6,843,501 – 6,843,591	- - - - - - - - -	4112	6,843,501 – 6,843,591	+	5	90	93.67	-1.74	0.85	0.947465
2510	3R_DroMel_CAF1	6,844,603 – 6,844,697	- - - - - - - - -	4113	6,844,603 – 6,844,697	-	6	94	96.31	-1.17	0.90	0.629847
2511	3R_DroMel_CAF1	6,847,954 – 6,848,056	- - - - - - - - -	4114	6,847,954 – 6,848,056	-	6	112	77.34	-1.66	0.64	0.845968
2512	3R_DroMel_CAF1	6,848,959 – 6,849,061	- - - - - - - - -	4115	6,848,959 – 6,849,061	-	6	118	76.40	-2.17	0.46	0.821613
2513	3R_DroMel_CAF1	6,852,150 – 6,852,241	- - - - - - - - -	4116	6,852,150 – 6,852,241	+	6	91	89.23	-1.78	0.84	0.640221
2514	3R_DroMel_CAF1	6,857,632 – 6,857,732	- - - - - - - - -	4117	6,857,632 – 6,857,732	+	5	100	99.20	-1.41	0.96	0.796881
2515	3R_DroMel_CAF1	6,857,867 – 6,857,957	- - - - - - - - -	4118	6,857,867 – 6,857,957	-	6	93	82.62	-1.86	0.71	0.685178
2516	3R_DroMel_CAF1	6,858,686 – 6,858,787	- - - - - - - - -	4119	6,858,686 – 6,858,787	+	5	103	84.38	-2.07	0.67	0.755246
2517	3R_DroMel_CAF1	6,859,775 – 6,859,881	- - - - - - - - -	4120	6,859,775 – 6,859,881	-	4	107	83.26	-1.72	0.66	0.621879
2518	3R_DroMel_CAF1	6,862,297 – 6,862,402	- - - - - - - - -	4121	6,862,297 – 6,862,402	-	4	109	85.36	-1.55	0.84	0.657761
2519	3R_DroMel_CAF1	6,863,777 – 6,863,872	- - - - - - - - -	4122	6,863,777 – 6,863,872	+	6	111	87.57	-3.82	0.80	0.970328
2519	3R_DroMel_CAF1	6,863,777 – 6,863,872	- - - - - - - - -	4123	6,863,777 – 6,863,872	-	6	111	87.57	-2.29	0.78	0.598426
2520	3R_DroMel_CAF1	6,865,543 – 6,865,648	- - - - - - - - -	4124	6,865,543 – 6,865,648	-	5	105	94.96	-1.58	0.81	0.681340
2521	3R_DroMel_CAF1	6,866,201 – 6,866,302	- - - - - - - - -	4125	6,866,201 – 6,866,302	+	5	101	89.49	-1.66	0.91	0.954379
2522	3R_DroMel_CAF1	6,867,573 – 6,867,665	- - - - - - - - -	4126	6,867,573 – 6,867,665	+	6	95	77.39	-1.39	0.66	0.726033
2523	3R_DroMel_CAF1	6,871,652 – 6,871,856	- - - - - - - - -	4127	6,871,652 – 6,871,753	-	6	106	92.73	-1.89	0.83	0.663749
2523	3R_DroMel_CAF1	6,871,652 – 6,871,856	- - - - - - - - -	4128	6,871,753 – 6,871,856	+	3	106	84.04	-0.92	0.96	0.872140
2524	3R_DroMel_CAF1	6,872,479 – 6,872,583	- - - - - - - - -	4129	6,872,479 – 6,872,583	+	5	114	75.95	-1.59	0.16	0.650290
2524	3R_DroMel_CAF1	6,872,479 – 6,872,583	- - - - - - - - -	4130	6,872,479 – 6,872,583	-	5	114	75.95	-1.47	0.14	0.566966
2525	3R_DroMel_CAF1	6,872,804 – 6,872,898	- - - - - - - - -	4131	6,872,804 – 6,872,898	-	3	105	84.13	-2.58	0.60	0.645157
2526	3R_DroMel_CAF1	6,875,697 – 6,875,793	- - - - - - - - -	4132	6,875,697 – 6,875,793	-	5	96	99.58	-1.44	1.01	0.862598
2527	3R_DroMel_CAF1	6,878,086 – 6,878,197	- - - - - - - - -	4133	6,878,086 – 6,878,197	-	6	120	82.40	-2.71	0.56	0.704736
2528	3R_DroMel_CAF1	6,879,432 – 6,879,526	- - - - - - - - -	4134	6,879,432 – 6,879,526	-	6	95	80.55	-2.16	0.51	0.552091
2529	3R_DroMel_CAF1	6,879,871 – 6,879,961	- - - - - - - - -	4135	6,879,871 – 6,879,961	+	6	94	94.67	-1.44	0.90	0.883417
2530	3R_DroMel_CAF1	6,880,991 – 6,881,089	- - - - - - - - -	4136	6,880,991 – 6,881,089	+	5	113	86.73	-1.53	0.74	0.512905
2530	3R_DroMel_CAF1	6,880,991 – 6,881,089	- - - - - - - - -	4137	6,880,991 – 6,881,089	-	5	113	86.73	-1.91	0.75	0.794795
2531	3R_DroMel_CAF1	6,883,843 – 6,883,936	- - - - - - - - -	4138	6,883,843 – 6,883,936	+	6	93	83.67	-2.48	0.80	0.875083
2532	3R_DroMel_CAF1	6,886,423 – 6,886,516	- - - - - - - - -	4139	6,886,423 – 6,886,516	-	6	98	94.50	-1.18	0.97	0.950436
2533	3R_DroMel_CAF1	6,886,672 – 6,886,780	- - - - - - - - -	4140	6,886,672 – 6,886,780	-	5	109	97.97	-2.29	0.81	0.888592
2534	3R_DroMel_CAF1	6,887,790 – 6,887,884	- - - - - - - - -	4141	6,887,790 – 6,887,884	-	6	95	77.58	-0.79	0.80	0.539847
2535	3R_DroMel_CAF1	6,888,003 – 6,888,109	- - - - - - - - -	4142	6,888,003 – 6,888,109	+	6	110	74.44	-1.01	0.68	0.598203
2535	3R_DroMel_CAF1	6,888,003 – 6,888,109	- - - - - - - - -	4143	6,888,003 – 6,888,109	-	6	110	74.44	-1.20	0.63	0.564519
2536	3R_DroMel_CAF1	6,890,653 – 6,890,753	- - - - - - - - -	4144	6,890,653 – 6,890,753	-	6	104	82.70	-2.30	0.57	0.511839
2537	3R_DroMel_CAF1	6,897,229 – 6,897,326	- - - - - - - - -	4145	6,897,229 – 6,897,326	+	6	110	80.27	-1.77	0.57	0.533005
2538	3R_DroMel_CAF1	6,900,387 – 6,900,483	- - - - - - - - -	4146	6,900,387 – 6,900,483	+	6	120	79.53	-1.44	0.62	0.550270
2539	3R_DroMel_CAF1	6,901,016 – 6,901,108	- - - - - - - - -	4147	6,901,016 – 6,901,108	+	6	113	77.68	-1.32	0.67	0.691669
2540	3R_DroMel_CAF1	6,903,165 – 6,903,264	- - - - - - - - -	4148	6,903,165 – 6,903,264	-	5	99	94.55	-1.25	0.87	0.595505
2541	3R_DroMel_CAF1	6,905,692 – 6,905,787	- - - - - - - - -	4149	6,905,692 – 6,905,787	-	6	108	79.73	-1.74	0.64	0.757432
2542	3R_DroMel_CAF1	6,906,576 – 6,906,684	- - - - - - - - -	4150	6,906,576 – 6,906,684	+	6	120	89.76	-1.61	0.85	0.568926
2542	3R_DroMel_CAF1	6,906,576 – 6,906,684	- - - - - - - - -	4151	6,906,576 – 6,906,684	-	6	120	89.76	-1.94	0.84	0.733675
2543	3R_DroMel_CAF1	6,907,437 – 6,907,533	- - - - - - - - -	4152	6,907,437 – 6,907,533	+	6	96	75.45	-2.36	0.74	0.988392
2544	3R_DroMel_CAF1	6,912,029 – 6,912,127	- - - - - - - - -	4153	6,912,029 – 6,912,127	-	5	99	81.11	-1.63	0.84	0.768571
2545	3R_DroMel_CAF1	6,914,241 – 6,914,343	- - - - - - - - -	4154	6,914,241 – 6,914,343	-	6	102	81.83	-2.14	0.66	0.769600
2546	3R_DroMel_CAF1	6,915,058 – 6,915,174	- - "RNAmicro=f:6915058_t:6915177_strand:-_p:0.861705" - - - - - -	4155	6,915,058 – 6,915,174	+	5	120	74.87	-5.39	0.64	0.999193
2546	3R_DroMel_CAF1	6,915,058 – 6,915,174		4156	6,915,058 – 6,915,174	-	5	120	74.87	-3.42	0.53	0.999864
2547	3R_DroMel_CAF1	6,915,281 – 6,915,384	- - - - - - - - -	4157	6,915,281 – 6,915,384	-	6	113	81.85	-1.37	0.90	0.678226
2548	3R_DroMel_CAF1	6,918,596 – 6,918,688	- - - - - - - - -	4158	6,918,596 – 6,918,688	+	6	118	77.27	-2.94	0.63	0.990907
2549	3R_DroMel_CAF1	6,921,135 – 6,921,278	- - - - - - - - -	4159	6,921,135 – 6,921,252	+	6	118	97.22	-1.49	0.93	0.959534
				4160	6,921,135 – 6,921,252	-	6	118	97.22	-1.42	0.87	0.620731
				4161	6,921,174 – 6,921,278	+	6	117	92.56	-1.06	0.95	0.782928
				4162	6,921,174 – 6,921,278	-	6	117	92.56	-1.97	0.81	0.513073
2550	3R_DroMel_CAF1	6,921,679 – 6,921,775	- - - - - - - - -	4163	6,921,679 – 6,921,775	+	6	117	79.50	-3.29	0.66	0.979337
2551	3R_DroMel_CAF1	6,923,900 – 6,924,005	- - - - - - - - -	4164	6,923,900 – 6,924,005	-	6	113	82.72	-2.30	0.60	0.605036
2552	3R_DroMel_CAF1	6,927,152 – 6,927,272	- - - - - - - - -	4165	6,927,152 – 6,927,272	-	5	120	73.87	-2.19	0.39	0.966144
2553	3R_DroMel_CAF1	6,927,862 – 6,927,971	- - - - - - - - -	4166	6,927,862 – 6,927,971	-	5	119	85.11	-1.61	0.77	0.608147
2554	3R_DroMel_CAF1	6,930,198 – 6,930,306	- - - - - - - - -	4167	6,930,198 – 6,930,306	+	5	108	95.18	-1.37	0.92	0.885018
2555	3R_DroMel_CAF1	6,931,067 – 6,931,158	- - - - - - - - -	4168	6,931,067 – 6,931,158	+	3	91	90.11	-2.64	0.89	0.946501
2556	3R_DroMel_CAF1	6,931,372 – 6,931,490	- - - - - - - - -	4169	6,931,372 – 6,931,490	-	5	119	94.63	-1.62	0.94	0.987553
2557	3R_DroMel_CAF1	6,932,465 – 6,932,687	- - - - - - - - -	4170	6,932,465 – 6,932,585	-	5	120	95.21	-1.92	0.76	0.539191
				4171	6,932,545 – 6,932,661	-	5	116	98.10	-1.84	0.99	0.995013
				4172	6,932,585 – 6,932,687	+	5	102	98.24	-1.30	0.90	0.533073
				4173	6,932,585 – 6,932,687	-	5	102	98.24	-1.40	0.94	0.837889
2558	3R_DroMel_CAF1	6,933,668 – 6,933,768	- - - - - - - - -	4174	6,933,668 – 6,933,768	-	5	100	99.40	-1.20	1.01	0.554851
2559	3R_DroMel_CAF1	6,934,588 – 6,934,681	- - - - - - - - -	4175	6,934,588 – 6,934,681	-	4	94	91.07	-2.64	0.76	0.895507
2560	3R_DroMel_CAF1	6,935,333 – 6,935,509	- - - - - - - - -	4176	6,935,333 – 6,935,447	-	5	114	96.49	-2.10	0.94	0.998680
				4177	6,935,370 – 6,935,479	-	5	109	96.88	-1.28	0.92	0.742352
				4178	6,935,407 – 6,935,509	+	5	102	97.65	-2.23	0.93	0.998183
				4179	6,935,407 – 6,935,509	-	5	102	97.65	-2.41	0.98	0.999762
2561	3R_DroMel_CAF1	6,936,102 – 6,936,215	- - - - - - - - -	4180	6,936,102 – 6,936,215	-	4	118	93.91	-3.49	0.97	0.997383
2562	3R_DroMel_CAF1	6,936,449 – 6,936,557	- - - - - - - - -	4181	6,936,449 – 6,936,557	-	5	118	93.51	-1.58	0.79	0.657138
2563	3R_DroMel_CAF1	6,936,659 – 6,936,819	- - - - - - - - -	4182	6,936,659 – 6,936,757	-	5	118	84.96	-1.99	0.73	0.811491
2563	3R_DroMel_CAF1	6,936,659 – 6,936,819	- - - - - - - - -	4183	6,936,729 – 6,936,819	+	4	90	97.22	-2.26	0.95	0.935706
2564	3R_DroMel_CAF1	6,939,722 – 6,939,960	- - - - - - - - -	4184	6,939,722 – 6,939,830	+	3	108	98.77	-2.63	1.00	0.981806
				4185	6,939,752 – 6,939,858	+	3	106	94.65	-3.01	0.90	0.959406
				4186	6,939,752 – 6,939,858	-	3	106	94.65	-3.21	0.80	0.826141
				4187	6,939,792 – 6,939,891	-	4	120	72.91	-2.24	0.42	0.542023
				4188	6,939,858 – 6,939,960	+	3	110	80.43	-1.87	0.67	0.754499
2565	3R_DroMel_CAF1	6,940,091 – 6,940,285	- - - - - - - - -	4189	6,940,091 – 6,940,205	-	3	120	93.82	-1.86	1.00	0.929457
2565	3R_DroMel_CAF1	6,940,091 – 6,940,285	- - - - - - - - -	4190	6,940,165 – 6,940,285	-	3	120	93.89	-1.95	0.89	0.687030
2566	3R_DroMel_CAF1	6,953,641 – 6,953,748	- - - "knownCDS=Parent=FBtr0082379;Name=Ugt86Dd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6633-RA" - - - - -	4191	6,953,641 – 6,953,748	-	6	107	76.81	-2.58	0.62	0.986594
2567	3R_DroMel_CAF1	6,953,779 – 6,953,883	- - - "knownCDS=Parent=FBtr0082379;Name=Ugt86Dd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6633-RA" - - - - -	4192	6,953,779 – 6,953,883	-	6	112	80.69	-1.48	0.81	0.760073
2568	3R_DroMel_CAF1	6,955,229 – 6,955,334	- - - - - - - - -	4193	6,955,229 – 6,955,334	-	5	112	84.62	-1.69	0.68	0.543346
2569	3R_DroMel_CAF1	6,955,588 – 6,955,682	- - - - - - - - -	4194	6,955,588 – 6,955,682	+	6	115	75.91	-2.53	0.55	0.985651
2570	3R_DroMel_CAF1	6,956,196 – 6,956,316	- - - - - - - - -	4195	6,956,196 – 6,956,316	+	5	120	93.25	-1.19	0.86	0.500000
2571	3R_DroMel_CAF1	6,956,366 – 6,956,464	- - - - - - - - -	4196	6,956,366 – 6,956,464	-	6	103	86.62	-2.41	0.78	0.678383
2572	3R_DroMel_CAF1	6,957,901 – 6,957,995	- - - - - - - - -	4197	6,957,901 – 6,957,995	+	5	94	95.64	-1.51	0.84	0.737605
2572	3R_DroMel_CAF1	6,957,901 – 6,957,995	- - - - - - - - -	4198	6,957,901 – 6,957,995	-	5	94	95.64	-1.49	0.90	0.922370
2573	3R_DroMel_CAF1	6,959,153 – 6,959,251	- - - - - - - - -	4199	6,959,153 – 6,959,251	+	5	98	92.41	-1.74	0.75	0.590504
2574	3R_DroMel_CAF1	6,959,527 – 6,959,630	- - - - - - - - -	4200	6,959,527 – 6,959,630	-	6	120	81.10	-2.29	0.52	0.604044
2575	3R_DroMel_CAF1	6,960,711 – 6,960,809	- - - - - - - - -	4201	6,960,711 – 6,960,809	-	3	102	84.39	-2.20	0.73	0.789853
2576	3R_DroMel_CAF1	6,965,232 – 6,965,325	- - - "knownCDS=Parent=FBtr0082336;Name=CG4706-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4706-RA" - - - - -	4202	6,965,232 – 6,965,325	+	6	120	74.97	-1.68	0.51	0.594149
2577	3R_DroMel_CAF1	6,967,045 – 6,967,154	- - - - - - - - -	4203	6,967,045 – 6,967,154	+	4	109	93.09	-1.37	0.88	0.500000
2578	3R_DroMel_CAF1	6,968,334 – 6,968,427	- - - - - - - - -	4204	6,968,334 – 6,968,427	-	5	108	85.66	-2.28	0.63	0.681731
2579	3R_DroMel_CAF1	6,969,332 – 6,969,484	- - - - - - - - -	4205	6,969,332 – 6,969,444	+	6	118	79.34	-1.40	0.66	0.639757
2579	3R_DroMel_CAF1	6,969,332 – 6,969,484	- - - - - - - - -	4206	6,969,372 – 6,969,484	+	5	112	84.66	-1.55	0.88	0.670212
2580	3R_DroMel_CAF1	6,971,225 – 6,971,324	- - - - - - - - -	4207	6,971,225 – 6,971,324	-	3	100	86.96	-2.18	0.74	0.647038
2581	3R_DroMel_CAF1	6,973,631 – 6,973,750	- - - - - - - - -	4208	6,973,631 – 6,973,723	+	6	120	74.38	-2.58	0.53	0.992092
				4209	6,973,631 – 6,973,723	-	6	120	74.38	-2.47	0.53	0.988575
				4210	6,973,648 – 6,973,750	+	6	120	72.63	-2.11	0.56	0.978489
				4211	6,973,648 – 6,973,750	-	6	120	72.63	-1.64	0.66	0.953313
2582	3R_DroMel_CAF1	6,978,029 – 6,978,149	- - - "knownCDS=Parent=FBtr0082378;Name=Ugt86Di-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6658-RA" - - - - -	4212	6,978,029 – 6,978,149	-	5	120	84.75	-2.24	0.77	0.938246
2583	3R_DroMel_CAF1	6,978,669 – 6,978,788	- - - "knownCDS=Parent=FBtr0082378;Name=Ugt86Di-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6658-RA" - - - - -	4213	6,978,669 – 6,978,788	+	5	120	74.37	-1.41	0.64	0.555492
2584	3R_DroMel_CAF1	6,979,100 – 6,979,219	- - - "knownCDS=Parent=FBtr0082378;Name=Ugt86Di-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6658-RA" - - - - -	4214	6,979,100 – 6,979,219	-	5	120	77.30	-1.91	0.39	0.627615
2585	3R_DroMel_CAF1	6,986,083 – 6,986,188	- - - - - - - - -	4215	6,986,083 – 6,986,188	+	3	105	93.53	-2.97	0.78	0.768820
2586	3R_DroMel_CAF1	6,986,393 – 6,986,499	- - - - - - - - -	4216	6,986,393 – 6,986,499	-	3	120	79.48	-2.90	0.59	0.976375
2587	3R_DroMel_CAF1	6,986,773 – 6,986,887	- - - - - - - - -	4217	6,986,773 – 6,986,887	-	3	120	88.42	-2.69	0.89	0.961582
2588	3R_DroMel_CAF1	6,995,809 – 6,995,913	- - - "knownCDS=Parent=FBtr0082375;Name=Ugt35b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6649-RA" - - - - -	4218	6,995,809 – 6,995,913	+	6	113	76.57	-1.67	0.56	0.697307
2589	3R_DroMel_CAF1	7,003,551 – 7,003,662	- - - - - - - - -	4219	7,003,551 – 7,003,662	-	4	112	83.71	-2.05	0.57	0.510806
2590	3R_DroMel_CAF1	7,003,820 – 7,003,910	- - - - - - - - -	4220	7,003,820 – 7,003,910	-	6	118	79.31	-1.31	0.81	0.774619
2591	3R_DroMel_CAF1	7,004,868 – 7,004,966	- - - - - - - - -	4221	7,004,868 – 7,004,966	+	6	105	81.49	-2.53	0.57	0.777687
2591	3R_DroMel_CAF1	7,004,868 – 7,004,966	- - - - - - - - -	4222	7,004,868 – 7,004,966	-	6	105	81.49	-2.59	0.54	0.756125
2592	3R_DroMel_CAF1	7,008,448 – 7,008,539	- - - - - - - - -	4223	7,008,448 – 7,008,539	-	5	91	86.25	-1.98	0.65	0.572430
2593	3R_DroMel_CAF1	7,009,773 – 7,009,875	- - - - - - - - -	4224	7,009,773 – 7,009,875	+	4	102	88.73	-1.36	0.91	0.613601
2594	3R_DroMel_CAF1	7,010,237 – 7,010,332	- - - - - - - - -	4225	7,010,237 – 7,010,332	+	5	96	97.48	-1.48	0.93	0.912001
2594	3R_DroMel_CAF1	7,010,237 – 7,010,332	- - - - - - - - -	4226	7,010,237 – 7,010,332	-	5	96	97.48	-1.28	0.94	0.747837
2595	3R_DroMel_CAF1	7,021,034 – 7,021,125	- - - - - - - - -	4227	7,021,034 – 7,021,125	-	4	93	76.53	-1.88	0.58	0.683338
2596	3R_DroMel_CAF1	7,021,463 – 7,021,568	- - - - - - - - -	4228	7,021,463 – 7,021,568	+	5	118	83.61	-1.64	0.69	0.555460
2597	3R_DroMel_CAF1	7,024,387 – 7,024,487	- - - - - - - - -	4229	7,024,387 – 7,024,487	-	5	116	80.38	-2.00	0.55	0.681751
2598	3R_DroMel_CAF1	7,025,075 – 7,025,177	- - - - - - - - -	4230	7,025,075 – 7,025,177	-	6	106	82.84	-2.94	0.58	0.745398
2599	3R_DroMel_CAF1	7,029,091 – 7,029,232	- - - "knownCDS=Parent=FBtr0082343;Name=nocturnin-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31299-RA" - - - - -	4231	7,029,091 – 7,029,192	+	6	101	83.30	-2.73	0.77	0.889165
				4232	7,029,091 – 7,029,192	-	6	101	83.30	-2.47	0.69	0.732204
				4233	7,029,127 – 7,029,232	-	6	105	89.46	-1.89	0.82	0.584625
2600	3R_DroMel_CAF1	7,033,051 – 7,033,143	- - - - - - - - -	4234	7,033,051 – 7,033,143	+	6	94	76.57	-1.15	0.71	0.744430
2601	3R_DroMel_CAF1	7,034,067 – 7,034,169	- - - "knownCDS=Parent=FBtr0082342, FBtr0082343;Name=nocturnin-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31299-RB, FlyBase+Annotation+IDs:CG31299-RA" - - - - -	4235	7,034,067 – 7,034,169	+	6	102	82.88	-2.31	0.77	0.842845
2602	3R_DroMel_CAF1	7,041,368 – 7,041,463	- - - - - - - - -	4236	7,041,368 – 7,041,463	-	6	100	79.83	-1.36	0.75	0.739096
2603	3R_DroMel_CAF1	7,041,830 – 7,041,935	- - - - - - - - -	4237	7,041,830 – 7,041,935	-	6	107	83.66	-2.45	0.69	0.698265
2604	3R_DroMel_CAF1	7,042,923 – 7,043,074	- - - "knownCDS=Parent=FBtr0082345;Name=CG4820-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4820-RA" - - - - -	4238	7,042,923 – 7,043,040	+	6	117	76.37	-2.16	0.54	0.934236
				4239	7,042,923 – 7,043,040	-	6	117	76.37	-2.12	0.49	0.862128
				4240	7,042,963 – 7,043,074	-	6	114	77.62	-1.70	0.53	0.500000
2605	3R_DroMel_CAF1	7,043,722 – 7,043,829	- - - - - - - - -	4241	7,043,722 – 7,043,829	+	6	114	72.34	-2.05	0.37	0.745347
2606	3R_DroMel_CAF1	7,047,491 – 7,047,595	- - - - - - - - -	4242	7,047,491 – 7,047,595	+	5	110	77.11	-1.91	0.32	0.689995
2607	3R_DroMel_CAF1	7,049,275 – 7,049,407	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002575;Name=psi28s-291;Alias=snoRNA:50;Dbxref=FB:FBgn0065064 ,GB:AJ809592,GB:NR_002496" - - - - - - - "Flybase=FBgn0065064:snoRNA:50:nuclear_small_nucleolar_RNA_gene\|5e-27"	4243	7,049,275 – 7,049,371	+	6	107	75.78	-2.38	0.84	0.983402
2607	3R_DroMel_CAF1	7,049,275 – 7,049,407		4244	7,049,296 – 7,049,407	+	6	116	77.69	-3.99	0.79	0.971719
2608	3R_DroMel_CAF1	7,049,556 – 7,049,669	- - - "knownCDS=Parent=FBtr0082346;Name=RpL3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4863-RA" - - - - -	4245	7,049,556 – 7,049,669	+	6	120	76.75	-0.80	0.77	0.574839
2609	3R_DroMel_CAF1	7,054,468 – 7,054,646	- - - "knownCDS=Parent=FBtr0082366;Name=CG10703-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10703-RA" - - - - -	4246	7,054,468 – 7,054,566	+	6	101	85.39	-2.88	0.79	0.887002
				4247	7,054,468 – 7,054,566	-	6	101	85.39	-3.40	0.80	0.946032
				4248	7,054,500 – 7,054,606	-	6	106	89.37	-3.04	0.74	0.514067
				4249	7,054,530 – 7,054,646	+	6	119	82.68	-2.74	0.59	0.728883
				4250	7,054,530 – 7,054,646	-	6	119	82.68	-2.73	0.55	0.643058
2610	3R_DroMel_CAF1	7,055,732 – 7,055,852	- - - "knownCDS=Parent=FBtr0082366;Name=CG10703-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10703-RA" - - - - -	4251	7,055,732 – 7,055,852	-	6	120	78.72	-1.59	0.59	0.590358
2611	3R_DroMel_CAF1	7,058,603 – 7,058,702	- - - - - - - - -	4252	7,058,603 – 7,058,702	-	5	100	81.49	-1.60	0.65	0.506104
2612	3R_DroMel_CAF1	7,059,725 – 7,059,885	- - - "knownCDS=Parent=FBtr0082363, FBtr0082364;Name=CG17184-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17184-RB, FlyBase+Annotation+IDs:CG17184-RA" - - - - -	4253	7,059,725 – 7,059,845	+	6	120	80.50	-1.72	0.67	0.758558
2612	3R_DroMel_CAF1	7,059,725 – 7,059,885		4254	7,059,765 – 7,059,885	+	6	120	80.56	-1.91	0.56	0.579313
2613	3R_DroMel_CAF1	7,064,890 – 7,065,010	- - - "knownCDS=Parent=FBtr0082356;Name=CG31388-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31388-RA" - - - - -	4255	7,064,890 – 7,065,010	+	5	120	90.83	-1.75	0.76	0.682249
2614	3R_DroMel_CAF1	7,065,090 – 7,065,200	- - - - - - - - -	4256	7,065,090 – 7,065,200	+	5	114	76.07	-1.59	0.80	0.945856
2615	3R_DroMel_CAF1	7,070,981 – 7,071,074	- - - "knownCDS=Parent=FBtr0082358;Name=CG5214-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5214-RA" - - - - -	4257	7,070,981 – 7,071,074	+	6	96	74.82	-1.98	0.61	0.962184
2616	3R_DroMel_CAF1	7,073,312 – 7,073,407	- - - - - - - - -	4258	7,073,312 – 7,073,407	+	3	95	96.49	-1.59	0.99	0.710643
2617	3R_DroMel_CAF1	7,073,835 – 7,073,944	- - "RNAmicro=f:7073835_t:7073953_strand:-_p:0.946059" - - - - - -	4259	7,073,835 – 7,073,944	+	6	119	81.50	-3.77	0.60	0.961137
2617	3R_DroMel_CAF1	7,073,835 – 7,073,944		4260	7,073,835 – 7,073,944	-	6	119	81.50	-5.60	0.67	0.979477
2618	3R_DroMel_CAF1	7,074,229 – 7,074,331	- - - - - - - - -	4261	7,074,229 – 7,074,331	+	6	116	78.33	-2.02	0.56	0.833991
2618	3R_DroMel_CAF1	7,074,229 – 7,074,331	- - - - - - - - -	4262	7,074,229 – 7,074,331	-	6	116	78.33	-1.00	0.72	0.540877
2619	3R_DroMel_CAF1	7,075,857 – 7,075,960	- - - - - - - - -	4263	7,075,857 – 7,075,960	+	4	109	92.45	-2.45	0.89	0.980326
2620	3R_DroMel_CAF1	7,082,647 – 7,082,782	- - - - - - - - -	4264	7,082,647 – 7,082,749	-	6	104	92.05	-1.71	0.88	0.889098
2620	3R_DroMel_CAF1	7,082,647 – 7,082,782	- - - - - - - - -	4265	7,082,680 – 7,082,782	-	6	113	81.83	-1.49	0.73	0.628327
2621	3R_DroMel_CAF1	7,084,744 – 7,084,844	- - - - - - - - -	4266	7,084,744 – 7,084,844	+	6	109	84.11	-2.58	0.67	0.615786
2622	3R_DroMel_CAF1	7,088,003 – 7,088,123	- - - - - - - - -	4267	7,088,003 – 7,088,123	-	6	120	78.67	-2.09	0.71	0.945409
2623	3R_DroMel_CAF1	7,091,611 – 7,091,750	- - - - - - - - -	4268	7,091,611 – 7,091,717	+	5	106	85.62	-1.46	0.84	0.541243
				4269	7,091,642 – 7,091,750	+	4	108	85.13	-2.79	0.74	0.979687
				4270	7,091,642 – 7,091,750	-	4	108	85.13	-1.48	0.74	0.561147
2624	3R_DroMel_CAF1	7,092,087 – 7,092,180	- - - - - - - - -	4271	7,092,087 – 7,092,180	+	6	99	91.50	-1.44	0.96	0.969837
2625	3R_DroMel_CAF1	7,093,249 – 7,093,348	- - - - - - - - -	4272	7,093,249 – 7,093,348	+	6	108	77.98	-1.87	0.69	0.929683
2626	3R_DroMel_CAF1	7,094,885 – 7,095,043	- - - - - - - - -	4273	7,094,885 – 7,095,003	-	5	120	88.58	-1.77	0.74	0.652722
				4274	7,094,923 – 7,095,043	+	5	120	90.75	-2.04	0.74	0.784222
				4275	7,094,923 – 7,095,043	-	5	120	90.75	-2.08	0.71	0.578602
2627	3R_DroMel_CAF1	7,095,806 – 7,095,899	- - - - - - - - -	4276	7,095,806 – 7,095,899	+	5	94	96.79	-1.82	0.95	0.994939
2628	3R_DroMel_CAF1	7,096,212 – 7,096,303	- - - "knownCDS=Parent=FBtr0082359;Name=CG31386-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31386-RA" - - - - -	4277	7,096,212 – 7,096,303	+	4	91	95.24	-2.43	0.89	0.948914
2629	3R_DroMel_CAF1	7,098,228 – 7,098,345	- - - - - - - - -	4278	7,098,228 – 7,098,320	+	6	98	76.85	-2.66	0.45	0.963648
				4279	7,098,228 – 7,098,320	-	6	98	76.85	-2.17	0.40	0.547980
				4280	7,098,248 – 7,098,345	+	4	106	82.59	-1.49	0.71	0.509453
2630	3R_DroMel_CAF1	7,099,704 – 7,099,795	- - - - - - - - -	4281	7,099,704 – 7,099,795	+	6	112	71.80	-2.62	0.32	0.974511
2631	3R_DroMel_CAF1	7,100,327 – 7,100,428	- - - - - - - - -	4282	7,100,327 – 7,100,428	+	5	117	78.49	-2.54	0.57	0.984243
2631	3R_DroMel_CAF1	7,100,327 – 7,100,428	- - - - - - - - -	4283	7,100,327 – 7,100,428	-	5	117	78.49	-3.21	0.54	0.998607
2632	3R_DroMel_CAF1	7,107,417 – 7,107,527	- - - - - - - - -	4284	7,107,417 – 7,107,527	-	4	110	91.20	-2.33	0.68	0.500000
2633	3R_DroMel_CAF1	7,110,699 – 7,110,792	- - - - - - - - -	4285	7,110,699 – 7,110,792	+	6	113	81.40	-1.41	0.68	0.564317
2634	3R_DroMel_CAF1	7,111,663 – 7,111,757	- - - - - - - - -	4286	7,111,663 – 7,111,757	+	6	116	71.85	-1.38	0.64	0.858606
2635	3R_DroMel_CAF1	7,112,335 – 7,112,445	- - - - - - - - -	4287	7,112,335 – 7,112,445	+	6	119	78.11	-2.00	0.52	0.736183
2636	3R_DroMel_CAF1	7,116,829 – 7,116,935	- - - - - - - - -	4288	7,116,829 – 7,116,935	+	3	112	51.37	-1.63	0.39	0.712770
2637	3R_DroMel_CAF1	7,118,797 – 7,118,898	- - - - - - - - -	4289	7,118,797 – 7,118,898	+	6	117	76.15	-2.41	0.35	0.719755
2638	3R_DroMel_CAF1	7,119,698 – 7,119,800	- - - - - - - - -	4290	7,119,698 – 7,119,800	-	6	102	79.51	-1.50	0.60	0.500000
2639	3R_DroMel_CAF1	7,120,193 – 7,120,298	- - - - - - - - -	4291	7,120,193 – 7,120,298	+	5	105	70.51	-1.40	0.76	0.976783
2640	3R_DroMel_CAF1	7,121,635 – 7,121,725	- - - - - - - - -	4292	7,121,635 – 7,121,725	+	6	98	81.42	-1.41	0.74	0.637842
2641	3R_DroMel_CAF1	7,121,743 – 7,121,841	- - - - - - - - -	4293	7,121,743 – 7,121,841	+	3	98	85.16	-2.91	0.66	0.876720
2642	3R_DroMel_CAF1	7,125,397 – 7,125,494	- - - - - - - - -	4294	7,125,397 – 7,125,494	-	6	97	94.23	-1.67	0.93	0.983506
2643	3R_DroMel_CAF1	7,125,707 – 7,125,801	- - - - - - - - -	4295	7,125,707 – 7,125,801	-	6	115	77.36	-1.56	0.63	0.767749
2644	3R_DroMel_CAF1	7,127,013 – 7,127,110	- - - - - - - - -	4296	7,127,013 – 7,127,110	-	5	114	82.23	-2.67	0.52	0.890900
2645	3R_DroMel_CAF1	7,128,269 – 7,128,359	- - - - - - - - -	4297	7,128,269 – 7,128,359	+	5	94	91.92	-1.59	0.78	0.627687
2646	3R_DroMel_CAF1	7,129,506 – 7,129,661	- - - - - - - - -	4298	7,129,506 – 7,129,600	+	6	95	80.73	-2.09	0.65	0.832822
				4299	7,129,506 – 7,129,600	-	6	95	80.73	-1.39	0.73	0.663848
				4300	7,129,523 – 7,129,640	+	6	117	90.05	-2.67	0.88	0.988914
				4301	7,129,523 – 7,129,640	-	6	117	90.05	-2.60	0.91	0.996625
				4302	7,129,560 – 7,129,661	+	6	106	80.98	-1.94	0.89	0.917375
				4303	7,129,560 – 7,129,661	-	6	106	80.98	-1.28	0.74	0.602938
2647	3R_DroMel_CAF1	7,130,359 – 7,130,457	- - - - - - - - -	4304	7,130,359 – 7,130,457	-	5	103	87.94	-2.76	0.75	0.973155
2648	3R_DroMel_CAF1	7,130,769 – 7,130,873	- - - - - - - - -	4305	7,130,769 – 7,130,873	+	6	105	96.87	-2.36	0.85	0.944410
2649	3R_DroMel_CAF1	7,132,946 – 7,133,040	- - - - - - - - -	4306	7,132,946 – 7,133,040	+	5	95	94.35	-1.97	0.76	0.639281
2649	3R_DroMel_CAF1	7,132,946 – 7,133,040	- - - - - - - - -	4307	7,132,946 – 7,133,040	-	5	95	94.35	-3.12	0.80	0.993958
2650	3R_DroMel_CAF1	7,134,117 – 7,134,219	- - - - - - - - -	4308	7,134,117 – 7,134,219	+	6	120	72.25	-1.59	0.58	0.852776
2651	3R_DroMel_CAF1	7,135,108 – 7,135,217	- - - - - - - - -	4309	7,135,108 – 7,135,217	+	6	113	77.46	-3.41	0.67	0.991373
2652	3R_DroMel_CAF1	7,135,434 – 7,135,537	- - - - - - - - -	4310	7,135,434 – 7,135,537	-	5	117	77.12	-1.82	0.78	0.954418
2653	3R_DroMel_CAF1	7,136,166 – 7,136,258	- - - - - - - - -	4311	7,136,166 – 7,136,258	-	6	120	75.55	-1.04	0.67	0.528225
2654	3R_DroMel_CAF1	7,138,851 – 7,138,956	- - - - - - - - -	4312	7,138,851 – 7,138,956	-	5	105	93.82	-2.18	0.94	0.999553
2655	3R_DroMel_CAF1	7,139,173 – 7,139,270	- - - - - - - - -	4313	7,139,173 – 7,139,270	+	6	97	97.25	-0.85	0.95	0.621023
2656	3R_DroMel_CAF1	7,140,649 – 7,140,778	- - - - - - - - -	4314	7,140,649 – 7,140,746	+	6	120	80.76	-2.44	0.52	0.723869
2656	3R_DroMel_CAF1	7,140,649 – 7,140,778	- - - - - - - - -	4315	7,140,686 – 7,140,778	+	6	92	80.19	-2.69	0.68	0.948517
2657	3R_DroMel_CAF1	7,141,004 – 7,141,110	- - - - - - - - -	4316	7,141,004 – 7,141,110	-	6	108	82.02	-1.28	0.85	0.558860
2658	3R_DroMel_CAF1	7,141,227 – 7,141,317	- - - - - - - - -	4317	7,141,227 – 7,141,317	-	6	111	83.09	-1.85	0.69	0.589385
2659	3R_DroMel_CAF1	7,142,045 – 7,142,143	- - - - - - - - -	4318	7,142,045 – 7,142,143	+	5	105	87.52	-3.11	0.74	0.986908
2659	3R_DroMel_CAF1	7,142,045 – 7,142,143	- - - - - - - - -	4319	7,142,045 – 7,142,143	-	5	105	87.52	-2.89	0.70	0.942859
2660	3R_DroMel_CAF1	7,144,993 – 7,145,093	- - - - - - - - -	4320	7,144,993 – 7,145,093	+	6	113	78.66	-2.41	0.40	0.590250
2661	3R_DroMel_CAF1	7,146,157 – 7,146,249	- - - - - - - - -	4321	7,146,157 – 7,146,249	-	6	104	84.10	-2.18	0.70	0.598608
2662	3R_DroMel_CAF1	7,146,673 – 7,146,790	- - - - - - - - -	4322	7,146,673 – 7,146,790	+	6	120	80.95	-1.62	0.61	0.531112
2663	3R_DroMel_CAF1	7,147,161 – 7,147,259	- - - - - - - - -	4323	7,147,161 – 7,147,259	+	6	115	85.93	-2.18	0.81	0.757452
2664	3R_DroMel_CAF1	7,150,213 – 7,150,313	- - - - - - - - -	4324	7,150,213 – 7,150,313	+	6	114	73.97	-1.75	0.71	0.974154
2665	3R_DroMel_CAF1	7,153,220 – 7,153,328	- - - - - - - - -	4325	7,153,220 – 7,153,328	+	3	113	71.69	-1.75	0.55	0.710664
2665	3R_DroMel_CAF1	7,153,220 – 7,153,328	- - - - - - - - -	4326	7,153,220 – 7,153,328	-	3	113	71.69	-2.18	0.47	0.553149
2666	3R_DroMel_CAF1	7,153,467 – 7,153,571	- - - - - - - - -	4327	7,153,467 – 7,153,571	+	6	120	78.42	-1.74	0.57	0.663516
2667	3R_DroMel_CAF1	7,153,826 – 7,153,928	- - - - - - - - -	4328	7,153,826 – 7,153,928	+	6	111	95.87	-2.52	0.85	0.960903
2668	3R_DroMel_CAF1	7,157,824 – 7,157,923	- - - - - - - - -	4329	7,157,824 – 7,157,923	+	6	120	79.86	-1.27	0.67	0.551093
2668	3R_DroMel_CAF1	7,157,824 – 7,157,923	- - - - - - - - -	4330	7,157,824 – 7,157,923	-	6	120	79.86	-1.96	0.65	0.853950
2669	3R_DroMel_CAF1	7,169,276 – 7,169,372	- - - - - - - - -	4331	7,169,276 – 7,169,372	-	5	99	95.21	-2.48	0.76	0.813139
2670	3R_DroMel_CAF1	7,172,490 – 7,172,610	- - - "knownCDS=Parent=FBtr0082408;Name=KP78b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17216-RA" - - - - -	4332	7,172,490 – 7,172,610	-	5	120	81.92	-2.02	0.66	0.819587
2671	3R_DroMel_CAF1	7,173,970 – 7,174,164	- - - - - - - - -	4333	7,173,970 – 7,174,090	+	5	120	91.08	-1.96	0.90	0.994217
2671	3R_DroMel_CAF1	7,173,970 – 7,174,164	- - - - - - - - -	4334	7,174,050 – 7,174,164	-	5	120	89.50	-1.39	0.83	0.613298
2672	3R_DroMel_CAF1	7,175,074 – 7,175,173	- - - "knownCDS=Parent=FBtr0082407;Name=KP78a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6715-RA" - - - - -	4335	7,175,074 – 7,175,173	-	6	99	82.83	-1.63	0.71	0.576118
2673	3R_DroMel_CAF1	7,179,849 – 7,179,941	- - - - - - - - -	4336	7,179,849 – 7,179,941	-	5	92	98.70	-1.15	0.98	0.512543
2674	3R_DroMel_CAF1	7,184,035 – 7,184,125	- - - - - - - - -	4337	7,184,035 – 7,184,125	+	6	118	74.70	-2.57	0.41	0.970051
2675	3R_DroMel_CAF1	7,184,160 – 7,184,254	- - - - - - - - -	4338	7,184,160 – 7,184,254	+	6	108	71.64	-2.50	0.33	0.962889
2675	3R_DroMel_CAF1	7,184,160 – 7,184,254	- - - - - - - - -	4339	7,184,160 – 7,184,254	-	6	108	71.64	-2.12	0.31	0.703265
2676	3R_DroMel_CAF1	7,189,972 – 7,190,102	- - - - - - - - -	4340	7,189,972 – 7,190,072	-	5	106	91.80	-1.30	0.82	0.500000
2676	3R_DroMel_CAF1	7,189,972 – 7,190,102	- - - - - - - - -	4341	7,190,001 – 7,190,102	-	5	107	92.47	-1.74	0.84	0.933319
2677	3R_DroMel_CAF1	7,193,100 – 7,193,193	- - - - - - - - -	4342	7,193,100 – 7,193,193	+	6	93	91.43	-2.67	0.80	0.776433
2677	3R_DroMel_CAF1	7,193,100 – 7,193,193	- - - - - - - - -	4343	7,193,100 – 7,193,193	-	6	93	91.43	-2.04	0.85	0.871290
2678	3R_DroMel_CAF1	7,199,379 – 7,199,556	- - - "knownCDS=Parent=FBtr0089720;Name=pros-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17228-RA" - - - - -	4344	7,199,379 – 7,199,477	+	6	103	76.72	-2.12	0.65	0.966771
2678	3R_DroMel_CAF1	7,199,379 – 7,199,556		4345	7,199,449 – 7,199,556	-	6	111	77.47	-1.51	0.68	0.843739
2679	3R_DroMel_CAF1	7,201,767 – 7,201,920	- - - "knownCDS=Parent=FBtr0089720;Name=pros-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17228-RA" - - - - -	4346	7,201,767 – 7,201,884	+	6	120	77.89	-1.90	0.50	0.583806
2679	3R_DroMel_CAF1	7,201,767 – 7,201,920		4347	7,201,804 – 7,201,920	+	6	120	81.56	-1.28	0.73	0.551888
2680	3R_DroMel_CAF1	7,203,078 – 7,203,169	- - - - - - - - -	4348	7,203,078 – 7,203,169	-	6	92	71.21	-1.96	0.60	0.976850
2681	3R_DroMel_CAF1	7,214,435 – 7,214,659	- - - - - - - - -	4349	7,214,435 – 7,214,525	+	6	99	70.16	-3.81	0.24	0.996254
				4350	7,214,435 – 7,214,525	-	6	99	70.16	-2.62	0.28	0.964182
				4351	7,214,465 – 7,214,558	+	6	100	76.73	-2.34	0.36	0.604656
				4352	7,214,558 – 7,214,659	+	6	116	86.33	-1.61	0.82	0.500000
				4353	7,214,558 – 7,214,659	-	6	116	86.33	-2.15	0.84	0.843981
2682	3R_DroMel_CAF1	7,215,199 – 7,215,315	- - - - - - - - -	4354	7,215,199 – 7,215,315	+	6	120	82.16	-2.63	0.62	0.800644
2683	3R_DroMel_CAF1	7,218,235 – 7,218,346	- - - - - - - - -	4355	7,218,235 – 7,218,346	-	6	118	78.58	-1.30	0.69	0.685677
2684	3R_DroMel_CAF1	7,218,532 – 7,218,625	- - - - - - - - -	4356	7,218,532 – 7,218,625	+	5	96	94.41	-1.16	0.99	0.842981
2685	3R_DroMel_CAF1	7,219,469 – 7,219,607	- - - - - - - - -	4357	7,219,469 – 7,219,575	+	6	116	91.04	-1.54	0.88	0.786178
2685	3R_DroMel_CAF1	7,219,469 – 7,219,607	- - - - - - - - -	4358	7,219,506 – 7,219,607	+	6	116	87.36	-3.16	0.73	0.624115
2686	3R_DroMel_CAF1	7,220,990 – 7,221,119	- - - - - - - - -	4359	7,220,990 – 7,221,091	+	5	102	91.62	-3.07	0.77	0.989612
2686	3R_DroMel_CAF1	7,220,990 – 7,221,119	- - - - - - - - -	4360	7,221,014 – 7,221,119	+	6	112	81.94	-2.35	0.65	0.793261
2687	3R_DroMel_CAF1	7,222,900 – 7,222,995	- - - - - - - - -	4361	7,222,900 – 7,222,995	+	6	98	86.85	-3.13	0.93	0.998400
2687	3R_DroMel_CAF1	7,222,900 – 7,222,995	- - - - - - - - -	4362	7,222,900 – 7,222,995	-	6	98	86.85	-2.94	0.78	0.824048
2688	3R_DroMel_CAF1	7,224,776 – 7,224,917	- - - - - - - - -	4363	7,224,776 – 7,224,880	+	6	117	75.97	-2.78	0.56	0.992772
				4364	7,224,776 – 7,224,880	-	6	117	75.97	-2.41	0.52	0.972278
				4365	7,224,809 – 7,224,917	+	6	117	78.26	-2.19	0.59	0.922797
2689	3R_DroMel_CAF1	7,230,528 – 7,230,626	- - - - - - - - -	4366	7,230,528 – 7,230,626	+	5	102	96.23	-1.97	0.85	0.969036
2690	3R_DroMel_CAF1	7,236,542 – 7,236,689	- - - - - - - - -	4367	7,236,542 – 7,236,650	+	6	111	76.92	-2.42	0.80	0.980941
				4368	7,236,542 – 7,236,650	-	6	111	76.92	-3.52	0.81	0.976104
				4369	7,236,574 – 7,236,689	+	6	120	81.54	-1.72	0.78	0.788893
				4370	7,236,574 – 7,236,689	-	6	120	81.54	-2.70	0.77	0.931835
2691	3R_DroMel_CAF1	7,241,150 – 7,241,243	- - - - - - - - -	4371	7,241,150 – 7,241,243	+	6	98	80.63	-2.34	0.54	0.754639
2691	3R_DroMel_CAF1	7,241,150 – 7,241,243	- - - - - - - - -	4372	7,241,150 – 7,241,243	-	6	98	80.63	-1.59	0.62	0.574605
2692	3R_DroMel_CAF1	7,242,303 – 7,242,416	- - - "knownCDS=Parent=FBtr0082405;Name=CG6723-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6723-RA" - - - - -	4373	7,242,303 – 7,242,416	-	6	114	77.81	-1.96	0.55	0.805122
2693	3R_DroMel_CAF1	7,248,591 – 7,248,708	- - - "knownCDS=Parent=FBtr0082387;Name=CG5270-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5270-RB" - - - - -	4374	7,248,591 – 7,248,708	-	6	120	70.06	-1.83	0.53	0.929450
2694	3R_DroMel_CAF1	7,254,123 – 7,254,240	- - - "knownCDS=Parent=FBtr0082388;Name=CG5270-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5270-RA" - - - - -	4375	7,254,123 – 7,254,240	-	6	120	76.21	-2.28	0.54	0.958100
2695	3R_DroMel_CAF1	7,257,116 – 7,257,300	- - - "knownCDS=Parent=FBtr0082403;Name=CG6764-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6764-RA" - - - - -	4376	7,257,116 – 7,257,232	-	6	119	79.48	-1.21	0.68	0.556610
				4377	7,257,154 – 7,257,271	+	6	119	79.56	-2.26	0.64	0.917721
				4378	7,257,154 – 7,257,271	-	6	119	79.56	-3.61	0.82	0.969423
				4379	7,257,194 – 7,257,300	+	6	107	82.02	-3.04	0.65	0.902315
				4380	7,257,194 – 7,257,300	-	6	107	82.02	-3.82	0.76	0.958079
2696	3R_DroMel_CAF1	7,257,546 – 7,257,653	- - - - - - - - -	4381	7,257,546 – 7,257,653	+	4	113	68.86	-1.52	0.55	0.661208
2697	3R_DroMel_CAF1	7,262,859 – 7,262,959	- - - "knownCDS=Parent=FBtr0082391;Name=CG5281-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5281-RA" - - - - -	4382	7,262,859 – 7,262,959	+	6	111	75.80	-1.77	0.50	0.604775
2698	3R_DroMel_CAF1	7,264,118 – 7,264,216	- - - "knownCDS=Parent=FBtr0082401;Name=CG31374-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31374-RC" - - - - -	4383	7,264,118 – 7,264,216	+	6	112	74.55	-2.36	0.35	0.842676
2699	3R_DroMel_CAF1	7,265,001 – 7,265,175	- - - - - - - - -	4384	7,265,001 – 7,265,104	-	5	112	76.05	-1.78	0.19	0.783196
2699	3R_DroMel_CAF1	7,265,001 – 7,265,175	- - - - - - - - -	4385	7,265,073 – 7,265,175	-	5	103	76.17	-1.34	0.10	0.510957
2700	3R_DroMel_CAF1	7,270,002 – 7,270,101	- - - - - - - - -	4386	7,270,002 – 7,270,101	-	6	99	95.96	-1.55	0.87	0.763388
2701	3R_DroMel_CAF1	7,275,540 – 7,275,656	- - - - - - - - -	4387	7,275,540 – 7,275,656	-	3	120	97.76	-1.88	0.94	0.748659
2702	3R_DroMel_CAF1	7,275,735 – 7,275,853	- - - - - - - - -	4388	7,275,735 – 7,275,853	+	3	120	87.47	-3.92	0.86	0.978560
2702	3R_DroMel_CAF1	7,275,735 – 7,275,853	- - - - - - - - -	4389	7,275,735 – 7,275,853	-	3	120	87.47	-2.16	0.71	0.560261
2703	3R_DroMel_CAF1	7,275,893 – 7,276,013	- - - - - - - - -	4390	7,275,893 – 7,276,013	-	3	120	95.56	-2.19	0.90	0.817074
2704	3R_DroMel_CAF1	7,276,403 – 7,276,538	- - - - - - - - -	4391	7,276,403 – 7,276,513	+	3	120	85.38	-2.00	0.81	0.751354
				4392	7,276,403 – 7,276,513	-	3	120	85.38	-1.59	0.85	0.618579
				4393	7,276,443 – 7,276,538	-	3	120	83.28	-1.68	0.85	0.793285
2705	3R_DroMel_CAF1	7,277,082 – 7,277,184	- - - - - - - - -	4394	7,277,082 – 7,277,184	-	3	120	76.02	-2.50	0.62	0.994760
2706	3R_DroMel_CAF1	7,277,443 – 7,277,563	- - - - - - - - -	4395	7,277,443 – 7,277,563	-	3	120	95.56	-2.33	0.86	0.757077
2707	3R_DroMel_CAF1	7,277,999 – 7,278,118	- - - - - - - - -	4396	7,277,999 – 7,278,118	-	3	120	82.30	-1.43	0.80	0.536362
2708	3R_DroMel_CAF1	7,278,278 – 7,278,397	- - - - - - - - -	4397	7,278,278 – 7,278,397	+	3	120	82.68	-2.23	0.65	0.770488
2708	3R_DroMel_CAF1	7,278,278 – 7,278,397	- - - - - - - - -	4398	7,278,278 – 7,278,397	-	3	120	82.68	-1.80	0.67	0.567450
2709	3R_DroMel_CAF1	7,282,095 – 7,282,190	- - - - - - - - -	4399	7,282,095 – 7,282,190	+	4	96	77.40	-2.38	0.54	0.909015
2710	3R_DroMel_CAF1	7,282,706 – 7,282,813	- - - - - - - - -	4400	7,282,706 – 7,282,813	-	3	107	76.64	-1.71	0.58	0.516696
2711	3R_DroMel_CAF1	7,288,407 – 7,288,515	- - - - - - - - -	4401	7,288,407 – 7,288,515	+	6	110	81.51	-1.54	0.66	0.583758
2712	3R_DroMel_CAF1	7,289,302 – 7,289,392	- - - - - - - - -	4402	7,289,302 – 7,289,392	+	6	110	78.60	-1.67	0.64	0.790094
2713	3R_DroMel_CAF1	7,295,126 – 7,295,224	- - - - - - - - -	4403	7,295,126 – 7,295,224	+	6	110	67.35	-2.65	0.26	0.963034
2714	3R_DroMel_CAF1	7,298,332 – 7,298,426	- - - - - - - - -	4404	7,298,332 – 7,298,426	+	4	94	85.05	-1.57	0.64	0.500000
2715	3R_DroMel_CAF1	7,299,004 – 7,299,112	- - - - - - - - -	4405	7,299,004 – 7,299,112	-	5	111	86.87	-2.05	0.64	0.519408
2716	3R_DroMel_CAF1	7,313,157 – 7,313,264	- - - - - - - - -	4406	7,313,157 – 7,313,264	+	5	120	93.23	-2.19	0.75	0.791630
2717	3R_DroMel_CAF1	7,313,655 – 7,313,773	- - - - - - - - -	4407	7,313,655 – 7,313,773	+	5	120	95.54	-1.30	0.96	0.898604
2718	3R_DroMel_CAF1	7,314,966 – 7,315,086	- - - - - - - - -	4408	7,314,966 – 7,315,086	-	5	120	94.82	-1.75	0.88	0.975360
2719	3R_DroMel_CAF1	7,315,196 – 7,315,309	- - - - - - - - -	4409	7,315,196 – 7,315,309	+	5	120	90.49	-1.81	0.82	0.912500
2720	3R_DroMel_CAF1	7,315,873 – 7,316,137	- - - - - - - - -	4410	7,315,873 – 7,315,988	+	5	120	83.26	-2.18	0.66	0.838094
				4411	7,315,949 – 7,316,057	+	5	120	91.24	-1.42	0.84	0.710848
				4412	7,316,017 – 7,316,137	-	5	120	97.06	-1.46	0.91	0.889050
2721	3R_DroMel_CAF1	7,317,808 – 7,318,035	- - - - - - - - -	4413	7,317,808 – 7,317,919	+	5	120	95.36	-1.56	0.98	0.989466
				4414	7,317,808 – 7,317,919	-	5	120	95.36	-1.19	0.98	0.851063
				4415	7,317,839 – 7,317,958	-	5	120	97.49	-1.69	0.99	0.991739
				4416	7,317,919 – 7,318,035	+	4	119	82.85	-1.67	0.69	0.642235
2722	3R_DroMel_CAF1	7,318,155 – 7,318,385	- - - - - - - - -	4417	7,318,155 – 7,318,265	+	5	120	89.43	-2.19	0.74	0.853035
				4418	7,318,155 – 7,318,265	-	5	120	89.43	-2.66	0.66	0.587617
				4419	7,318,225 – 7,318,345	+	5	120	95.58	-1.68	0.95	0.991661
				4420	7,318,225 – 7,318,345	-	5	120	95.58	-1.56	0.93	0.971156
				4421	7,318,265 – 7,318,385	+	5	120	96.08	-1.50	0.98	0.979829
				4422	7,318,265 – 7,318,385	-	5	120	96.08	-2.41	0.95	0.999838
2723	3R_DroMel_CAF1	7,320,223 – 7,320,411	- - - - - - - - -	4423	7,320,223 – 7,320,338	+	4	120	95.18	-2.18	0.89	0.920659
				4424	7,320,223 – 7,320,338	-	4	120	95.18	-1.94	0.88	0.833728
				4425	7,320,263 – 7,320,376	+	4	120	93.85	-1.89	0.81	0.684689
				4426	7,320,263 – 7,320,376	-	4	120	93.85	-2.21	0.80	0.788465
				4427	7,320,303 – 7,320,411	-	4	120	88.16	-2.10	0.66	0.637709
2724	3R_DroMel_CAF1	7,321,064 – 7,321,184	- - - - - - - - -	4428	7,321,064 – 7,321,184	+	4	120	85.59	-1.86	0.66	0.683380
2724	3R_DroMel_CAF1	7,321,064 – 7,321,184	- - - - - - - - -	4429	7,321,064 – 7,321,184	-	4	120	85.59	-1.97	0.75	0.843326
2725	3R_DroMel_CAF1	7,322,498 – 7,322,618	- - - - - - - - -	4430	7,322,498 – 7,322,618	+	4	120	95.97	-1.79	0.85	0.587572
2726	3R_DroMel_CAF1	7,322,731 – 7,322,851	- - - - - - - - -	4431	7,322,731 – 7,322,851	+	4	120	90.68	-1.37	0.91	0.620185
2727	3R_DroMel_CAF1	7,323,261 – 7,323,380	- - - - - - - - -	4432	7,323,261 – 7,323,380	-	4	120	83.09	-3.07	0.64	0.982065
2728	3R_DroMel_CAF1	7,323,571 – 7,323,984	- - - - - - - - -	4433	7,323,571 – 7,323,691	-	4	120	97.35	-1.66	0.99	0.724015
				4434	7,323,611 – 7,323,723	-	4	120	83.77	-0.96	0.98	0.541960
				4435	7,323,723 – 7,323,843	-	5	120	91.83	-1.49	0.83	0.752852
				4436	7,323,763 – 7,323,875	+	5	120	83.88	-2.87	0.90	0.998441
				4437	7,323,875 – 7,323,984	-	4	120	81.08	-1.79	0.61	0.561201
2729	3R_DroMel_CAF1	7,324,285 – 7,324,405	- - - - - - - - -	4438	7,324,285 – 7,324,405	+	5	120	92.00	-1.92	0.80	0.904455
2730	3R_DroMel_CAF1	7,324,510 – 7,324,697	- - - - - - - - -	4439	7,324,510 – 7,324,621	-	5	120	90.75	-1.61	0.81	0.797050
2730	3R_DroMel_CAF1	7,324,510 – 7,324,697	- - - - - - - - -	4440	7,324,582 – 7,324,697	-	5	120	93.81	-1.78	0.86	0.966848
2731	3R_DroMel_CAF1	7,325,224 – 7,325,328	- - - - - - - - -	4441	7,325,224 – 7,325,328	-	5	120	92.79	-1.16	0.93	0.664104
2732	3R_DroMel_CAF1	7,325,958 – 7,326,078	- - - - - - - - -	4442	7,325,958 – 7,326,078	+	5	120	94.74	-1.41	0.83	0.608223
2732	3R_DroMel_CAF1	7,325,958 – 7,326,078	- - - - - - - - -	4443	7,325,958 – 7,326,078	-	5	120	94.74	-2.14	0.78	0.843946
2733	3R_DroMel_CAF1	7,326,420 – 7,326,578	- - - - - - - - -	4444	7,326,420 – 7,326,538	+	5	120	93.12	-1.77	0.99	0.998343
2733	3R_DroMel_CAF1	7,326,420 – 7,326,578	- - - - - - - - -	4445	7,326,458 – 7,326,578	+	5	120	97.83	-1.63	0.99	0.985744
2734	3R_DroMel_CAF1	7,327,837 – 7,327,937	- - - - - - - - -	4446	7,327,837 – 7,327,937	-	6	101	90.10	-1.75	0.97	0.992629
2735	3R_DroMel_CAF1	7,328,497 – 7,328,598	- - - - - - - - -	4447	7,328,497 – 7,328,598	+	5	110	92.54	-1.95	0.76	0.749173
2735	3R_DroMel_CAF1	7,328,497 – 7,328,598	- - - - - - - - -	4448	7,328,497 – 7,328,598	-	5	110	92.54	-3.16	0.79	0.993500
2736	3R_DroMel_CAF1	7,330,862 – 7,330,962	- - - - - - - - -	4449	7,330,862 – 7,330,962	-	5	100	91.80	-1.58	0.85	0.877647
2737	3R_DroMel_CAF1	7,331,486 – 7,331,576	- - - - - - - - -	4450	7,331,486 – 7,331,576	+	6	107	74.77	-1.93	0.47	0.736674
2738	3R_DroMel_CAF1	7,333,319 – 7,333,432	- - - - - - - - -	4451	7,333,319 – 7,333,432	+	5	118	90.41	-2.58	0.74	0.935031
2739	3R_DroMel_CAF1	7,337,315 – 7,337,452	- - - - - - - - -	4452	7,337,315 – 7,337,412	+	5	100	93.14	-1.76	0.98	0.997600
				4453	7,337,355 – 7,337,452	+	5	100	90.92	-2.51	0.86	0.998286
				4454	7,337,355 – 7,337,452	-	5	100	90.92	-2.69	0.94	0.999934
2740	3R_DroMel_CAF1	7,340,614 – 7,340,734	- - - - - - - - -	4455	7,340,614 – 7,340,734	+	5	120	89.58	-2.00	0.80	0.938539
2741	3R_DroMel_CAF1	7,341,266 – 7,341,363	- - - - - - - - -	4456	7,341,266 – 7,341,363	+	6	118	76.76	-1.96	0.51	0.750254
2742	3R_DroMel_CAF1	7,344,055 – 7,344,155	- - - - - - - - -	4457	7,344,055 – 7,344,155	-	6	100	68.98	-1.67	0.59	0.930972
2743	3R_DroMel_CAF1	7,344,884 – 7,344,980	- - - - - - - - -	4458	7,344,884 – 7,344,980	-	6	102	72.49	-1.35	0.58	0.573519
2744	3R_DroMel_CAF1	7,345,322 – 7,345,428	- - - - - - - - -	4459	7,345,322 – 7,345,428	+	6	117	84.19	-2.04	0.79	0.724778
2745	3R_DroMel_CAF1	7,347,901 – 7,347,997	- - - - - - - - -	4460	7,347,901 – 7,347,997	+	6	119	83.17	-2.05	0.84	0.862516
2746	3R_DroMel_CAF1	7,353,145 – 7,353,294	- - - - - - - - -	4461	7,353,145 – 7,353,255	+	6	120	75.15	-2.65	0.48	0.988149
				4462	7,353,145 – 7,353,255	-	6	120	75.15	-2.58	0.44	0.977359
				4463	7,353,185 – 7,353,294	+	6	119	77.95	-1.98	0.47	0.500000
2747	3R_DroMel_CAF1	7,355,596 – 7,355,692	- - - - - - - - -	4464	7,355,596 – 7,355,692	+	5	99	90.50	-2.59	0.80	0.989643
2747	3R_DroMel_CAF1	7,355,596 – 7,355,692	- - - - - - - - -	4465	7,355,596 – 7,355,692	-	5	99	90.50	-2.24	0.76	0.911592
2748	3R_DroMel_CAF1	7,355,907 – 7,356,005	- - - - - - - - -	4466	7,355,907 – 7,356,005	+	6	110	72.73	-1.98	0.42	0.797216
2749	3R_DroMel_CAF1	7,361,586 – 7,361,695	- - - - - - - - -	4467	7,361,586 – 7,361,695	+	4	109	83.92	-3.68	0.88	0.998992
2749	3R_DroMel_CAF1	7,361,586 – 7,361,695	- - - - - - - - -	4468	7,361,586 – 7,361,695	-	4	109	83.92	-1.43	0.78	0.513072
2750	3R_DroMel_CAF1	7,362,143 – 7,362,233	- - - - - - - - -	4469	7,362,143 – 7,362,233	+	6	112	77.33	-2.66	0.56	0.982271
2750	3R_DroMel_CAF1	7,362,143 – 7,362,233	- - - - - - - - -	4470	7,362,143 – 7,362,233	-	6	112	77.33	-2.28	0.53	0.923533
2751	3R_DroMel_CAF1	7,362,564 – 7,362,696	- - - - - - - - -	4471	7,362,564 – 7,362,673	-	5	110	84.53	-1.98	0.64	0.630728
2751	3R_DroMel_CAF1	7,362,564 – 7,362,696	- - - - - - - - -	4472	7,362,604 – 7,362,696	-	5	93	89.67	-1.80	0.78	0.797053
2752	3R_DroMel_CAF1	7,362,839 – 7,362,950	- - - - - - - - -	4473	7,362,839 – 7,362,950	-	6	120	75.61	-2.34	0.33	0.638224
2753	3R_DroMel_CAF1	7,363,364 – 7,363,457	- - - - - - - - -	4474	7,363,364 – 7,363,457	+	5	93	85.84	-1.47	0.79	0.500000
2754	3R_DroMel_CAF1	7,364,560 – 7,364,665	- - - - - - - - -	4475	7,364,560 – 7,364,665	-	5	105	84.99	-2.27	0.63	0.734195
2755	3R_DroMel_CAF1	7,365,244 – 7,365,345	- - - - - - - - -	4476	7,365,244 – 7,365,345	+	5	120	79.40	-2.43	0.56	0.958935
2755	3R_DroMel_CAF1	7,365,244 – 7,365,345	- - - - - - - - -	4477	7,365,244 – 7,365,345	-	5	120	79.40	-2.60	0.64	0.988386
2756	3R_DroMel_CAF1	7,366,539 – 7,366,641	- - - - - - - - -	4478	7,366,539 – 7,366,641	+	5	115	71.35	-2.09	0.28	0.944836
2757	3R_DroMel_CAF1	7,367,903 – 7,368,005	- - - - - - - - -	4479	7,367,903 – 7,368,005	+	4	115	87.20	-1.75	0.85	0.825354
2758	3R_DroMel_CAF1	7,372,939 – 7,373,033	- - - - - - - - -	4480	7,372,939 – 7,373,033	+	4	95	83.66	-1.53	0.74	0.575903
2758	3R_DroMel_CAF1	7,372,939 – 7,373,033	- - - - - - - - -	4481	7,372,939 – 7,373,033	-	4	95	83.66	-1.56	0.74	0.603345
2759	3R_DroMel_CAF1	7,375,430 – 7,375,529	- - - - - - - - -	4482	7,375,430 – 7,375,529	+	6	120	84.47	-2.59	0.68	0.603420
2760	3R_DroMel_CAF1	7,375,772 – 7,375,879	- - - - - - - - -	4483	7,375,772 – 7,375,879	-	4	115	81.68	-2.31	0.62	0.901233
2761	3R_DroMel_CAF1	7,378,715 – 7,378,818	- - - - - - - - -	4484	7,378,715 – 7,378,818	-	3	111	72.99	-2.04	0.61	0.986645
2762	3R_DroMel_CAF1	7,379,996 – 7,380,116	- - "RNAmicro=f:7379996_t:7380115_strand:+_p:0.716927" "knownCDS=Parent=FBtr0082409;Name=CG14708-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14708-RA" - - - - -	4485	7,379,996 – 7,380,116	-	5	120	88.67	-1.32	0.83	0.500000
2763	3R_DroMel_CAF1	7,380,818 – 7,380,912	- - - - - - - - -	4486	7,380,818 – 7,380,912	-	5	97	80.15	-1.63	0.72	0.699566
2764	3R_DroMel_CAF1	7,382,738 – 7,382,834	- - - - - - - - -	4487	7,382,738 – 7,382,834	-	4	100	75.22	-3.01	0.36	0.710377
2765	3R_DroMel_CAF1	7,387,287 – 7,387,378	- - - - - - - - -	4488	7,387,287 – 7,387,378	+	5	93	77.54	-1.98	0.39	0.700357
2766	3R_DroMel_CAF1	7,403,029 – 7,403,120	- - - "knownCDS=Parent=FBtr0082460;Name=CG6790-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6790-RA" - - - - -	4489	7,403,029 – 7,403,120	-	6	113	61.90	-1.56	0.37	0.528239
2767	3R_DroMel_CAF1	7,404,255 – 7,404,375	- - - "knownCDS=Parent=FBtr0082460;Name=CG6790-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6790-RA" - - - - -	4490	7,404,255 – 7,404,375	-	4	120	90.42	-1.95	0.87	0.921436
2768	3R_DroMel_CAF1	7,411,863 – 7,411,999	- - - "knownCDS=Parent=FBtr0082458;Name=CG6791-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6791-RB" - - - - -	4491	7,411,863 – 7,411,963	+	6	115	78.29	-1.50	0.72	0.854104
2768	3R_DroMel_CAF1	7,411,863 – 7,411,999		4492	7,411,895 – 7,411,999	+	6	114	82.24	-1.58	0.67	0.543499
2769	3R_DroMel_CAF1	7,420,018 – 7,420,119	- - - - - - - - -	4493	7,420,018 – 7,420,119	-	5	101	93.17	-2.29	0.83	0.990065
2770	3R_DroMel_CAF1	7,420,674 – 7,420,769	- - - - - - - - -	4494	7,420,674 – 7,420,769	+	4	118	83.57	-1.84	0.76	0.809555
2771	3R_DroMel_CAF1	7,420,893 – 7,420,986	- - - - - - - - -	4495	7,420,893 – 7,420,986	+	3	93	86.42	-1.61	0.84	0.554385
2772	3R_DroMel_CAF1	7,423,160 – 7,423,255	- - - - - - - - -	4496	7,423,160 – 7,423,255	-	6	110	85.00	-2.08	0.75	0.585607
2773	3R_DroMel_CAF1	7,428,280 – 7,428,386	- - - - - - - - -	4497	7,428,280 – 7,428,386	+	5	108	85.86	-1.79	0.66	0.500000
2774	3R_DroMel_CAF1	7,429,331 – 7,429,435	- - - - - - - - -	4498	7,429,331 – 7,429,435	-	5	120	74.20	-1.88	0.25	0.855244
2775	3R_DroMel_CAF1	7,431,511 – 7,431,617	- - - - - - - - -	4499	7,431,511 – 7,431,617	+	4	109	86.82	-1.82	0.83	0.841607
2775	3R_DroMel_CAF1	7,431,511 – 7,431,617	- - - - - - - - -	4500	7,431,511 – 7,431,617	-	4	109	86.82	-3.00	0.71	0.959641
2776	3R_DroMel_CAF1	7,431,888 – 7,431,995	- - - - - - - - -	4501	7,431,888 – 7,431,995	+	4	110	94.78	-1.86	0.95	0.912831
2777	3R_DroMel_CAF1	7,434,131 – 7,434,225	- - - - - - - - -	4502	7,434,131 – 7,434,225	+	4	98	93.02	-1.90	0.86	0.860477
2777	3R_DroMel_CAF1	7,434,131 – 7,434,225	- - - - - - - - -	4503	7,434,131 – 7,434,225	-	4	98	93.02	-1.58	0.86	0.654999
2778	3R_DroMel_CAF1	7,437,423 – 7,437,515	- - - - - - - - -	4504	7,437,423 – 7,437,515	-	5	98	95.34	-1.40	0.95	0.942372
2779	3R_DroMel_CAF1	7,437,714 – 7,437,816	- - - - - - - - -	4505	7,437,714 – 7,437,816	+	5	120	68.92	-1.89	0.48	0.891950
2779	3R_DroMel_CAF1	7,437,714 – 7,437,816	- - - - - - - - -	4506	7,437,714 – 7,437,816	-	5	120	68.92	-1.34	0.60	0.558137
2780	3R_DroMel_CAF1	7,437,904 – 7,437,998	- - - - - - - - -	4507	7,437,904 – 7,437,998	-	3	96	90.56	-1.80	0.96	0.889576
2781	3R_DroMel_CAF1	7,440,175 – 7,440,276	- - - - - - - - -	4508	7,440,175 – 7,440,276	-	5	108	93.26	-1.67	0.76	0.533132
2782	3R_DroMel_CAF1	7,442,306 – 7,442,422	- - - - - - - - -	4509	7,442,306 – 7,442,422	+	6	120	89.66	-2.16	0.81	0.612106
2783	3R_DroMel_CAF1	7,443,656 – 7,443,762	- - - - - - - - -	4510	7,443,656 – 7,443,762	+	4	118	92.26	-1.88	0.85	0.844985
2784	3R_DroMel_CAF1	7,443,839 – 7,443,939	- - - - - - - - -	4511	7,443,839 – 7,443,939	-	5	105	91.83	-2.35	0.78	0.954015
2785	3R_DroMel_CAF1	7,447,209 – 7,447,304	- - - "knownCDS=Parent=FBtr0082415;Name=CG14710-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14710-RA" - - - - -	4512	7,447,209 – 7,447,304	+	6	102	80.89	-1.36	0.70	0.607227
2786	3R_DroMel_CAF1	7,452,649 – 7,452,753	- - - - - - - - -	4513	7,452,649 – 7,452,753	+	6	109	75.90	-1.99	0.44	0.612759
2787	3R_DroMel_CAF1	7,452,854 – 7,452,951	- - - - - - - - -	4514	7,452,854 – 7,452,951	-	6	100	78.48	-1.37	0.69	0.750695
2788	3R_DroMel_CAF1	7,453,059 – 7,453,222	- - - "knownCDS=Parent=FBtr0082417;Name=CG18764-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18764-RA" - - - - -	4515	7,453,059 – 7,453,164	+	5	108	83.43	-2.34	0.56	0.705359
				4516	7,453,127 – 7,453,222	+	5	110	79.21	-1.67	0.62	0.575439
				4517	7,453,127 – 7,453,222	-	5	110	79.21	-2.10	0.71	0.946742
2789	3R_DroMel_CAF1	7,455,386 – 7,455,502	- - - - - - - - -	4518	7,455,386 – 7,455,502	-	6	120	82.22	-1.81	0.61	0.511692
2790	3R_DroMel_CAF1	7,456,530 – 7,456,627	- - - "knownCDS=Parent=FBtr0082418;Name=CG14712-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14712-RA" - - - - -	4519	7,456,530 – 7,456,627	-	5	100	92.46	-2.46	0.91	0.999737
2791	3R_DroMel_CAF1	7,458,167 – 7,458,302	- - - "knownCDS=Parent=FBtr0082418;Name=CG14712-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14712-RA" - - - - -	4520	7,458,167 – 7,458,263	+	6	102	75.53	-2.26	0.52	0.956633
2791	3R_DroMel_CAF1	7,458,167 – 7,458,302		4521	7,458,189 – 7,458,302	+	6	120	78.30	-2.06	0.53	0.781798
2792	3R_DroMel_CAF1	7,458,339 – 7,458,451	- - - "knownCDS=Parent=FBtr0082418;Name=CG14712-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14712-RA" - - - - -	4522	7,458,339 – 7,458,451	-	6	120	75.21	-2.10	0.37	0.557659
2793	3R_DroMel_CAF1	7,462,779 – 7,462,872	- - - "knownCDS=Parent=FBtr0082447;Name=Csk-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17309-RD" - - - - -	4523	7,462,779 – 7,462,872	+	6	109	78.56	-1.03	0.77	0.635462
2794	3R_DroMel_CAF1	7,462,967 – 7,463,078	- - - "knownCDS=Parent=FBtr0082445;Name=Csk-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17309-RA" - - - - -	4524	7,462,967 – 7,463,078	-	6	120	77.10	-2.26	0.46	0.821728
2795	3R_DroMel_CAF1	7,475,185 – 7,475,305	- - - - - - - - -	4525	7,475,185 – 7,475,305	-	3	120	96.67	-2.16	0.92	0.843255
2796	3R_DroMel_CAF1	7,475,495 – 7,475,615	- - - - - - - - -	4526	7,475,495 – 7,475,615	+	3	120	96.67	-1.95	0.86	0.531938
2797	3R_DroMel_CAF1	7,475,685 – 7,475,795	- - - - - - - - -	4527	7,475,685 – 7,475,795	+	3	120	90.83	-2.32	0.89	0.886889
2798	3R_DroMel_CAF1	7,475,992 – 7,476,088	- - - - - - - - -	4528	7,475,992 – 7,476,088	+	3	96	98.61	-1.73	0.91	0.559808
2799	3R_DroMel_CAF1	7,476,427 – 7,476,518	- - - - - - - - -	4529	7,476,427 – 7,476,518	+	3	91	85.71	-2.29	0.72	0.739685
2800	3R_DroMel_CAF1	7,478,088 – 7,478,205	- - - "knownCDS=Parent=FBtr0082420;Name=CG10535-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10535-RA" - - - - -	4530	7,478,088 – 7,478,205	+	4	120	67.79	-2.20	0.47	0.950629
2801	3R_DroMel_CAF1	7,484,557 – 7,484,649	- - - - - - - - -	4531	7,484,557 – 7,484,649	+	5	103	80.60	-1.73	0.64	0.617712
2802	3R_DroMel_CAF1	7,488,206 – 7,488,297	- - - - - - - - -	4532	7,488,206 – 7,488,297	+	5	106	69.99	-1.89	0.32	0.791257
2803	3R_DroMel_CAF1	7,503,682 – 7,503,783	- - - - - - - - -	4533	7,503,682 – 7,503,783	+	6	103	83.26	-2.32	0.65	0.624624
2804	3R_DroMel_CAF1	7,504,814 – 7,504,922	- - - "knownCDS=Parent=FBtr0082442;Name=Taf12-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17358-RA" - - - - -	4534	7,504,814 – 7,504,922	+	6	108	76.40	-1.83	0.54	0.753695
2805	3R_DroMel_CAF1	7,509,668 – 7,509,787	- - - "knownCDS=Parent=FBtr0082439;Name=CG6830-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6830-RA" - - - - -	4535	7,509,668 – 7,509,787	+	6	119	74.76	-2.41	0.49	0.977401
2806	3R_DroMel_CAF1	7,510,186 – 7,510,358	- - - - - - - - -	4536	7,510,186 – 7,510,278	+	5	93	86.84	-2.18	0.68	0.739857
				4537	7,510,199 – 7,510,318	+	5	120	86.79	-2.22	0.64	0.595447
				4538	7,510,239 – 7,510,358	+	5	120	82.53	-2.42	0.56	0.824512
2807	3R_DroMel_CAF1	7,511,584 – 7,511,721	- - - "knownCDS=Parent=FBtr0082438;Name=CG6834-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6834-RA" - - - - -	4539	7,511,584 – 7,511,688	+	6	111	80.82	-2.12	0.56	0.658947
2807	3R_DroMel_CAF1	7,511,584 – 7,511,721		4540	7,511,624 – 7,511,721	+	6	108	73.89	-1.38	0.60	0.667477
2808	3R_DroMel_CAF1	7,513,273 – 7,513,363	- - - - - - - - -	4541	7,513,273 – 7,513,363	-	6	103	66.83	-2.39	0.28	0.922451
2809	3R_DroMel_CAF1	7,515,816 – 7,516,008	- - - - - - - - -	4542	7,515,816 – 7,515,906	+	4	90	80.37	-2.18	0.75	0.960135
				4543	7,515,816 – 7,515,906	-	4	90	80.37	-1.80	0.74	0.815967
				4544	7,515,906 – 7,516,008	+	5	113	70.62	-1.58	0.55	0.622106
2810	3R_DroMel_CAF1	7,518,652 – 7,518,747	- - - - - - - - -	4545	7,518,652 – 7,518,747	+	4	112	88.24	-1.72	0.87	0.831475
2811	3R_DroMel_CAF1	7,518,821 – 7,518,912	- - - - - - - - -	4546	7,518,821 – 7,518,912	+	3	91	92.67	-2.34	0.92	0.925073
2811	3R_DroMel_CAF1	7,518,821 – 7,518,912	- - - - - - - - -	4547	7,518,821 – 7,518,912	-	3	91	92.67	-3.71	0.91	0.983472
2812	3R_DroMel_CAF1	7,521,821 – 7,521,914	- - - - - - - - -	4548	7,521,821 – 7,521,914	+	6	104	75.86	-1.78	0.58	0.852594
2813	3R_DroMel_CAF1	7,529,627 – 7,529,723	- - - - - - - - -	4549	7,529,627 – 7,529,723	-	3	97	67.38	-2.04	0.61	0.999238
2814	3R_DroMel_CAF1	7,530,733 – 7,530,846	- - - - - - - - -	4550	7,530,733 – 7,530,846	+	5	114	88.32	-1.53	0.81	0.670171
2815	3R_DroMel_CAF1	7,531,817 – 7,531,907	- - - - - - - - -	4551	7,531,817 – 7,531,907	-	6	96	76.09	-1.68	0.52	0.541257
2816	3R_DroMel_CAF1	7,535,341 – 7,535,475	- - - "knownCDS=texon3397;Parent=CG_NCBI_GNO_32211088, CG_DGIL_SNO_28364612" - - - - -	4552	7,535,341 – 7,535,435	-	6	116	74.71	-2.19	0.46	0.917216
				4553	7,535,375 – 7,535,475	+	4	100	81.60	-2.73	0.55	0.887959
				4554	7,535,375 – 7,535,475	-	4	100	81.60	-1.84	0.63	0.636306
2817	3R_DroMel_CAF1	7,536,698 – 7,536,791	- - - - - - - - -	4555	7,536,698 – 7,536,791	-	6	116	66.89	-1.63	0.56	0.901061
2818	3R_DroMel_CAF1	7,539,003 – 7,539,093	- - - - - - - - -	4556	7,539,003 – 7,539,093	+	5	110	85.61	-1.50	0.76	0.505263
2819	3R_DroMel_CAF1	7,539,111 – 7,539,227	- - - - - - - - -	4557	7,539,111 – 7,539,227	-	5	117	92.49	-1.59	0.78	0.615592
2820	3R_DroMel_CAF1	7,547,330 – 7,547,432	- - - - - - - - -	4558	7,547,330 – 7,547,432	-	5	103	87.20	-1.46	0.85	0.611928
2821	3R_DroMel_CAF1	7,553,928 – 7,554,027	- - - - - - - - -	4559	7,553,928 – 7,554,027	-	5	117	81.40	-1.78	0.68	0.708660
2822	3R_DroMel_CAF1	7,554,717 – 7,554,813	- - - - - - - - -	4560	7,554,717 – 7,554,813	+	5	116	81.30	-2.22	0.36	0.500000
2823	3R_DroMel_CAF1	7,560,421 – 7,560,520	- - - - - - - - -	4561	7,560,421 – 7,560,520	-	6	111	83.56	-2.74	0.61	0.622480
2824	3R_DroMel_CAF1	7,568,211 – 7,568,309	- - - "knownCDS=Parent=FBtr0082431;Name=CG14722-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14722-RA" - - - - -	4562	7,568,211 – 7,568,309	+	6	110	80.78	-1.25	0.70	0.554273
2825	3R_DroMel_CAF1	7,571,975 – 7,572,078	- - - "knownCDS=Parent=FBtr0082432, FBtr0082433;Name=CG6923-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6923-RA, FlyBase+Annotation+IDs:CG6923-RB" - - - - -	4563	7,571,975 – 7,572,078	-	6	107	74.32	-1.49	0.55	0.559443
2826	3R_DroMel_CAF1	7,575,130 – 7,575,275	- - - - - - - - -	4564	7,575,130 – 7,575,237	+	5	107	90.27	-2.28	0.82	0.986527
				4565	7,575,130 – 7,575,237	-	5	107	90.27	-2.76	0.85	0.998969
				4566	7,575,162 – 7,575,275	+	5	113	84.77	-2.92	0.79	0.995024
				4567	7,575,162 – 7,575,275	-	5	113	84.77	-2.83	0.72	0.980448
2827	3R_DroMel_CAF1	7,575,531 – 7,575,744	- - - - - - - - -	4568	7,575,531 – 7,575,647	+	5	120	88.52	-1.84	0.82	0.907319
				4569	7,575,531 – 7,575,647	-	5	120	88.52	-1.71	0.78	0.755283
				4570	7,575,647 – 7,575,744	-	5	97	89.38	-1.74	0.79	0.810634
2828	3R_DroMel_CAF1	7,576,943 – 7,577,046	- - - - - - - - -	4571	7,576,943 – 7,577,046	-	5	105	91.76	-1.95	0.95	0.998434
2829	3R_DroMel_CAF1	7,578,160 – 7,578,258	- - - - - - - - -	4572	7,578,160 – 7,578,258	-	4	101	96.98	-1.56	0.92	0.515186
2830	3R_DroMel_CAF1	7,579,945 – 7,580,078	- - - "knownCDS=Parent=FBtr0082534, FBtr0082535;Name=Lk6-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17342-RA, FlyBase+Annotation+IDs:CG17342-RB" - - - - -	4573	7,579,945 – 7,580,042	+	6	103	73.69	-3.78	0.84	0.961712
				4574	7,579,945 – 7,580,042	-	6	103	73.69	-2.47	0.70	0.993520
				4575	7,579,977 – 7,580,078	+	6	101	90.10	-3.21	0.90	0.998865
				4576	7,579,977 – 7,580,078	-	6	101	90.10	-1.49	0.87	0.595695
2831	3R_DroMel_CAF1	7,586,209 – 7,586,414	- - - - - - - - -	4577	7,586,209 – 7,586,313	-	5	104	83.88	-2.08	0.68	0.800220
2831	3R_DroMel_CAF1	7,586,209 – 7,586,414	- - - - - - - - -	4578	7,586,313 – 7,586,414	-	5	106	83.35	-3.48	0.83	0.999123
2832	3R_DroMel_CAF1	7,586,612 – 7,586,723	- - - - - - - - -	4579	7,586,612 – 7,586,723	+	5	113	87.90	-2.13	0.70	0.727460
2833	3R_DroMel_CAF1	7,605,067 – 7,605,227	- - - - - - - - -	4580	7,605,067 – 7,605,187	+	3	120	84.12	-1.36	0.96	0.951222
2833	3R_DroMel_CAF1	7,605,067 – 7,605,227	- - - - - - - - -	4581	7,605,107 – 7,605,227	+	3	120	82.35	-0.29	0.93	0.534181
2834	3R_DroMel_CAF1	7,605,369 – 7,605,489	- - - - - - - - -	4582	7,605,369 – 7,605,489	-	3	120	100.00	-1.50	1.00	0.664496
2835	3R_DroMel_CAF1	7,605,529 – 7,605,689	- - - - - - - - -	4583	7,605,529 – 7,605,649	+	3	120	97.22	-2.32	0.95	0.932839
				4584	7,605,529 – 7,605,649	-	3	120	97.22	-1.97	0.96	0.854425
				4585	7,605,569 – 7,605,689	+	3	120	97.78	-2.26	0.96	0.922246
				4586	7,605,569 – 7,605,689	-	3	120	97.78	-2.22	0.96	0.921496
2836	3R_DroMel_CAF1	7,606,062 – 7,606,209	- - - - - - - - -	4587	7,606,062 – 7,606,169	-	3	120	88.33	-1.48	0.88	0.512447
				4588	7,606,089 – 7,606,209	+	3	120	98.33	-2.15	0.97	0.918654
				4589	7,606,089 – 7,606,209	-	3	120	98.33	-2.01	0.94	0.811507
2837	3R_DroMel_CAF1	7,608,013 – 7,608,121	- - - "knownCDS=Parent=FBtr0082531;Name=CG17360-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17360-RA" - - - - -	4590	7,608,013 – 7,608,121	-	6	108	85.74	-1.80	0.84	0.706467
2838	3R_DroMel_CAF1	7,611,189 – 7,611,289	- - - "knownCDS=Parent=FBtr0082531;Name=CG17360-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17360-RA" - - - - -	4591	7,611,189 – 7,611,289	-	6	100	80.74	-1.74	0.70	0.784227
2839	3R_DroMel_CAF1	7,622,717 – 7,622,816	- - - - - - - - -	4592	7,622,717 – 7,622,816	+	4	99	90.24	-1.55	0.76	0.563026
2840	3R_DroMel_CAF1	7,629,240 – 7,629,348	- - - - - - - - -	4593	7,629,240 – 7,629,348	-	5	111	72.32	-1.58	0.16	0.614377
2841	3R_DroMel_CAF1	7,630,672 – 7,630,771	- - - - - - - - -	4594	7,630,672 – 7,630,771	-	6	108	76.69	-1.29	0.70	0.808766
2842	3R_DroMel_CAF1	7,631,967 – 7,632,065	- - - "knownCDS=Parent=FBtr0082528;Name=CG31116-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31116-RD" - - - - -	4595	7,631,967 – 7,632,065	-	6	105	82.86	-2.11	0.61	0.531808
2843	3R_DroMel_CAF1	7,634,271 – 7,634,363	- - - - - - - - -	4596	7,634,271 – 7,634,363	-	5	104	75.62	-2.45	0.48	0.989527
2844	3R_DroMel_CAF1	7,637,906 – 7,638,002	- - - - - - - - -	4597	7,637,906 – 7,638,002	+	6	109	85.10	-2.84	0.79	0.884326
2845	3R_DroMel_CAF1	7,642,187 – 7,642,291	- - - "knownCDS=Parent=FBtr0089917, FBtr0089919;Name=CG6946-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6946-RB, FlyBase+Annotation+IDs:CG6946-RA" - - - - -	4598	7,642,187 – 7,642,291	-	6	110	79.66	-1.79	0.66	0.818580
2846	3R_DroMel_CAF1	7,650,316 – 7,650,436	- - - "knownCDS=Parent=FBtr0082517;Name=CG6959-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6959-RA" - - - - -	4599	7,650,316 – 7,650,436	-	6	120	84.72	-2.00	0.73	0.539871
2847	3R_DroMel_CAF1	7,654,017 – 7,654,118	- - - - - - - - -	4600	7,654,017 – 7,654,118	+	5	102	82.55	-2.03	0.62	0.728851
2848	3R_DroMel_CAF1	7,654,436 – 7,654,563	- - - - - - - - -	4601	7,654,436 – 7,654,539	+	6	103	82.68	-2.71	0.66	0.814338
				4602	7,654,464 – 7,654,563	+	5	99	94.54	-2.77	0.90	0.999812
				4603	7,654,464 – 7,654,563	-	5	99	94.54	-2.72	0.75	0.874158
2849	3R_DroMel_CAF1	7,655,515 – 7,655,629	- - - - - - - - -	4604	7,655,515 – 7,655,611	+	6	120	78.72	-1.90	0.63	0.868453
2849	3R_DroMel_CAF1	7,655,515 – 7,655,629	- - - - - - - - -	4605	7,655,531 – 7,655,629	+	6	98	88.64	-2.60	0.81	0.848764
2850	3R_DroMel_CAF1	7,661,194 – 7,661,362	- - - - - - - - -	4606	7,661,194 – 7,661,285	-	5	93	90.91	-2.30	0.85	0.994720
2850	3R_DroMel_CAF1	7,661,194 – 7,661,362	- - - - - - - - -	4607	7,661,263 – 7,661,362	-	6	120	80.87	-2.07	0.65	0.811552
2851	3R_DroMel_CAF1	7,661,390 – 7,661,547	- - - - - - - - -	4608	7,661,390 – 7,661,510	-	6	120	94.89	-1.33	0.87	0.524831
2851	3R_DroMel_CAF1	7,661,390 – 7,661,547	- - - - - - - - -	4609	7,661,430 – 7,661,547	+	6	120	89.17	-1.90	0.90	0.942005
2852	3R_DroMel_CAF1	7,665,870 – 7,665,980	- - - - - - - - -	4610	7,665,870 – 7,665,980	+	6	120	82.46	-2.75	0.63	0.811189
2853	3R_DroMel_CAF1	7,672,307 – 7,672,420	- - - - - - - - -	4611	7,672,307 – 7,672,420	+	5	118	89.77	-2.46	0.85	0.996783
2854	3R_DroMel_CAF1	7,673,099 – 7,673,194	- - - - - - - - -	4612	7,673,099 – 7,673,194	+	6	96	94.48	-1.64	0.87	0.795435
2855	3R_DroMel_CAF1	7,673,782 – 7,673,884	- - - - - - - - -	4613	7,673,782 – 7,673,884	-	5	105	82.49	-2.28	0.64	0.878013
2856	3R_DroMel_CAF1	7,678,092 – 7,678,230	- - - - - - - - -	4614	7,678,092 – 7,678,212	-	5	120	74.41	-2.11	0.32	0.946070
2856	3R_DroMel_CAF1	7,678,092 – 7,678,230	- - - - - - - - -	4615	7,678,132 – 7,678,230	-	4	120	74.16	-2.73	0.58	0.998505
2857	3R_DroMel_CAF1	7,678,633 – 7,678,728	- - - - - - - - -	4616	7,678,633 – 7,678,728	-	6	109	78.97	-1.77	0.60	0.741630
2858	3R_DroMel_CAF1	7,678,887 – 7,678,978	- - - - - - - - -	4617	7,678,887 – 7,678,978	-	5	93	91.63	-1.91	0.88	0.988939
2859	3R_DroMel_CAF1	7,679,494 – 7,679,632	- - - - - - - - -	4618	7,679,494 – 7,679,600	-	5	120	78.26	-2.10	0.56	0.888521
				4619	7,679,534 – 7,679,632	+	5	120	69.51	-2.19	0.26	0.939192
				4620	7,679,534 – 7,679,632	-	5	120	69.51	-3.45	0.50	0.999884
2860	3R_DroMel_CAF1	7,681,537 – 7,681,655	- - - - - - - - -	4621	7,681,537 – 7,681,655	-	6	118	93.16	-1.56	0.91	0.924913
2861	3R_DroMel_CAF1	7,683,151 – 7,683,258	- - - - - - - - -	4622	7,683,151 – 7,683,258	-	6	120	78.31	-2.17	0.56	0.889285
2862	3R_DroMel_CAF1	7,685,109 – 7,685,362	- - - - - - - - -	4623	7,685,109 – 7,685,228	+	5	119	76.36	-2.42	0.64	0.992882
				4624	7,685,228 – 7,685,347	+	5	120	96.31	-1.77	0.89	0.968760
				4625	7,685,268 – 7,685,362	+	5	95	95.76	-5.28	0.94	0.999520
				4626	7,685,268 – 7,685,362	-	5	95	95.76	-3.83	0.90	0.999896
2863	3R_DroMel_CAF1	7,685,504 – 7,685,623	- - - - - - - - -	4627	7,685,504 – 7,685,623	+	6	120	80.82	-1.55	0.63	0.557457
2864	3R_DroMel_CAF1	7,685,790 – 7,685,898	- - - - - - - - -	4628	7,685,790 – 7,685,898	+	6	120	82.27	-1.65	0.69	0.608952
2865	3R_DroMel_CAF1	7,687,109 – 7,687,222	- - - - - - - - -	4629	7,687,109 – 7,687,222	-	6	120	83.33	-1.72	0.70	0.540930
2866	3R_DroMel_CAF1	7,688,026 – 7,688,127	- - - - - - - - -	4630	7,688,026 – 7,688,127	-	6	104	84.68	-2.96	0.71	0.736943
2867	3R_DroMel_CAF1	7,689,638 – 7,689,731	- - - - - - - - -	4631	7,689,638 – 7,689,731	+	5	95	91.95	-1.63	0.85	0.908748
2868	3R_DroMel_CAF1	7,689,922 – 7,690,027	- - - - - - - - -	4632	7,689,922 – 7,690,027	-	6	119	78.16	-2.11	0.50	0.746789
2869	3R_DroMel_CAF1	7,691,132 – 7,691,238	- - - - - - - - -	4633	7,691,132 – 7,691,238	-	6	111	90.84	-3.24	0.79	0.909458
2870	3R_DroMel_CAF1	7,692,428 – 7,692,531	- - - - - - - - -	4634	7,692,428 – 7,692,531	+	4	111	92.06	-2.24	0.80	0.874032
2870	3R_DroMel_CAF1	7,692,428 – 7,692,531	- - - - - - - - -	4635	7,692,428 – 7,692,531	-	4	111	92.06	-2.16	0.74	0.641371
2871	3R_DroMel_CAF1	7,694,069 – 7,694,177	- - - - - - - - -	4636	7,694,069 – 7,694,177	-	5	111	91.89	-1.35	0.80	0.521436
2872	3R_DroMel_CAF1	7,697,762 – 7,697,857	- - - - - - - - -	4637	7,697,762 – 7,697,857	-	6	120	76.40	-1.42	0.63	0.730068
2873	3R_DroMel_CAF1	7,699,065 – 7,699,185	- - - - - - - - -	4638	7,699,065 – 7,699,185	-	5	120	93.25	-1.33	0.83	0.591285
2874	3R_DroMel_CAF1	7,699,535 – 7,699,679	- - - - - - - - -	4639	7,699,535 – 7,699,626	+	6	104	76.66	-2.51	0.41	0.903012
2874	3R_DroMel_CAF1	7,699,535 – 7,699,679	- - - - - - - - -	4640	7,699,586 – 7,699,679	-	6	95	72.64	-2.45	0.32	0.927816
2875	3R_DroMel_CAF1	7,700,472 – 7,700,575	- - - - - - - - -	4641	7,700,472 – 7,700,575	-	6	117	81.32	-1.21	0.73	0.530652
2876	3R_DroMel_CAF1	7,700,706 – 7,700,892	- - - - - - - - -	4642	7,700,706 – 7,700,815	+	6	120	88.40	-1.66	0.85	0.638332
				4643	7,700,735 – 7,700,855	-	6	120	92.22	-1.53	0.87	0.739826
				4644	7,700,775 – 7,700,892	-	6	120	83.40	-1.93	0.67	0.554732
2877	3R_DroMel_CAF1	7,702,871 – 7,702,966	- - - - - - - - -	4645	7,702,871 – 7,702,966	+	3	95	100.00	-1.66	1.00	0.764699
2878	3R_DroMel_CAF1	7,704,752 – 7,704,884	- - - "knownCDS=Parent=FBtr0082475;Name=sad-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14728-RA" - - - - -	4646	7,704,752 – 7,704,844	+	6	93	77.83	-2.49	0.60	0.971396
				4647	7,704,752 – 7,704,844	-	6	93	77.83	-2.63	0.73	0.980945
				4648	7,704,780 – 7,704,884	-	6	104	77.95	-1.57	0.66	0.817676
2879	3R_DroMel_CAF1	7,707,825 – 7,707,945	- - - "knownCDS=Parent=FBtr0082516;Name=CG6962-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6962-RA" - - - - -	4649	7,707,825 – 7,707,945	-	6	120	79.11	-1.89	0.64	0.859198
2880	3R_DroMel_CAF1	7,713,657 – 7,713,748	- - - - - - - - -	4650	7,713,657 – 7,713,748	-	5	92	94.67	-1.36	0.94	0.924077
2881	3R_DroMel_CAF1	7,717,723 – 7,717,817	- - - "knownCDS=Parent=FBtr0082477;Name=CG31368-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31368-RB" - - - - -	4651	7,717,723 – 7,717,817	-	6	109	77.61	-1.49	0.64	0.734598
2882	3R_DroMel_CAF1	7,719,229 – 7,719,319	- - - - - - - - -	4652	7,719,229 – 7,719,319	-	6	90	93.78	-1.39	0.96	0.976313
2883	3R_DroMel_CAF1	7,720,261 – 7,720,357	- - - "knownCDS=Parent=FBtr0082513;Name=Cad87A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6977-RA" - - - - -	4653	7,720,261 – 7,720,357	+	6	99	84.91	-1.55	0.84	0.590048
2884	3R_DroMel_CAF1	7,732,103 – 7,732,194	- - - - - - - - -	4654	7,732,103 – 7,732,194	-	6	93	82.80	-2.41	0.59	0.605765
2885	3R_DroMel_CAF1	7,738,557 – 7,738,655	- - - - - - - - -	4655	7,738,557 – 7,738,655	-	5	98	90.41	-1.98	0.74	0.754198
2886	3R_DroMel_CAF1	7,739,157 – 7,739,269	- - - - - - - - -	4656	7,739,157 – 7,739,269	+	4	120	82.63	-3.02	0.68	0.992024
2886	3R_DroMel_CAF1	7,739,157 – 7,739,269	- - - - - - - - -	4657	7,739,157 – 7,739,269	-	4	120	82.63	-2.12	0.76	0.928297
2887	3R_DroMel_CAF1	7,742,029 – 7,742,127	- - - - - - - - -	4658	7,742,029 – 7,742,127	+	6	117	80.60	-2.07	0.62	0.800237
2887	3R_DroMel_CAF1	7,742,029 – 7,742,127	- - - - - - - - -	4659	7,742,029 – 7,742,127	-	6	117	80.60	-2.21	0.61	0.827723
2888	3R_DroMel_CAF1	7,746,165 – 7,746,293	- - - - - - - - -	4660	7,746,165 – 7,746,255	-	3	90	95.56	-1.69	0.91	0.528479
2888	3R_DroMel_CAF1	7,746,165 – 7,746,293	- - - - - - - - -	4661	7,746,175 – 7,746,293	+	5	118	94.92	-1.41	0.89	0.856233
2889	3R_DroMel_CAF1	7,751,500 – 7,751,607	- - - - - - - - -	4662	7,751,500 – 7,751,607	+	4	107	81.46	-2.25	0.85	0.977807
2890	3R_DroMel_CAF1	7,755,676 – 7,755,787	- - - - - - - - -	4663	7,755,676 – 7,755,787	+	6	113	85.01	-2.11	0.81	0.771639
2891	3R_DroMel_CAF1	7,755,817 – 7,755,917	- - - - - - - - -	4664	7,755,817 – 7,755,917	+	6	120	77.24	-2.21	0.41	0.619033
2892	3R_DroMel_CAF1	7,765,371 – 7,765,505	- - - - - - - - -	4665	7,765,371 – 7,765,470	+	5	102	93.82	-1.87	0.90	0.993867
2892	3R_DroMel_CAF1	7,765,371 – 7,765,505	- - - - - - - - -	4666	7,765,399 – 7,765,505	+	6	107	78.16	-2.48	0.67	0.974314
2893	3R_DroMel_CAF1	7,769,463 – 7,769,554	- - - - - - - - -	4667	7,769,463 – 7,769,554	-	6	102	82.44	-2.28	0.64	0.706596
2894	3R_DroMel_CAF1	7,770,885 – 7,770,982	- - - - - - - - -	4668	7,770,885 – 7,770,982	+	6	97	90.93	-1.91	0.87	0.891827
2895	3R_DroMel_CAF1	7,771,604 – 7,771,706	- - - - - - - - -	4669	7,771,604 – 7,771,706	+	6	104	81.25	-1.74	0.67	0.709118
2896	3R_DroMel_CAF1	7,774,312 – 7,774,408	- - - - - - - - -	4670	7,774,312 – 7,774,408	-	6	103	79.02	-1.94	0.59	0.794785
2897	3R_DroMel_CAF1	7,775,494 – 7,775,694	- - - "knownCDS=Parent=FBtr0082479;Name=CG31211-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31211-RA" - - - - -	4671	7,775,494 – 7,775,614	-	5	120	92.00	-1.27	0.87	0.645890
				4672	7,775,534 – 7,775,654	+	5	120	93.67	-1.88	0.92	0.996120
				4673	7,775,534 – 7,775,654	-	5	120	93.67	-1.47	0.88	0.894273
				4674	7,775,574 – 7,775,694	+	5	120	91.08	-2.19	0.76	0.892427
				4675	7,775,574 – 7,775,694	-	5	120	91.08	-1.93	0.84	0.969927
2898	3R_DroMel_CAF1	7,775,973 – 7,776,093	- - - "knownCDS=Parent=FBtr0082480, FBtr0082481;Name=CG31211-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31211-RB, FlyBase+Annotation+IDs:CG31211-RC" - - - - -	4676	7,775,973 – 7,776,093	+	5	120	89.17	-1.53	0.75	0.520550
2899	3R_DroMel_CAF1	7,778,606 – 7,778,707	- - - "knownCDS=Parent=FBtr0082480;Name=CG31211-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31211-RB" - - - - -	4677	7,778,606 – 7,778,707	-	6	117	72.73	-1.97	0.46	0.862080
2900	3R_DroMel_CAF1	7,778,822 – 7,778,919	- - - "knownCDS=Parent=FBtr0082479;Name=CG31211-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31211-RA" - - - - -	4678	7,778,822 – 7,778,919	+	6	103	81.82	-1.84	0.61	0.555051
2901	3R_DroMel_CAF1	7,779,410 – 7,779,524	- - - "knownCDS=Parent=FBtr0082479;Name=CG31211-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31211-RA" - - - - -	4679	7,779,410 – 7,779,524	-	6	117	74.88	-2.29	0.62	0.986754
2902	3R_DroMel_CAF1	7,780,376 – 7,780,496	- - - "knownCDS=Parent=FBtr0082512;Name=Hsp70Aa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31366-RA" - - - - -	4680	7,780,376 – 7,780,496	+	4	120	95.69	-1.60	0.92	0.666625
2903	3R_DroMel_CAF1	7,781,336 – 7,781,456	- - - "knownCDS=Parent=FBtr0082512;Name=Hsp70Aa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31366-RA" - - - "ncRNAdb=MmuscAK078618_unclassifiable\|3e-14" -	4681	7,781,336 – 7,781,456	-	4	120	97.78	-1.83	0.99	0.803674
2904	3R_DroMel_CAF1	7,782,176 – 7,782,410	- - - - - - - - -	4682	7,782,176 – 7,782,292	-	4	120	86.67	-2.42	0.74	0.934448
2904	3R_DroMel_CAF1	7,782,176 – 7,782,410	- - - - - - - - -	4683	7,782,292 – 7,782,410	+	4	120	85.20	-1.57	0.67	0.558814
2905	3R_DroMel_CAF1	7,784,234 – 7,784,341	- - - - - - - - -	4684	7,784,234 – 7,784,341	+	3	111	82.07	-2.95	0.69	0.981514
2906	3R_DroMel_CAF1	7,786,397 – 7,786,517	- - - - - - - - -	4685	7,786,397 – 7,786,517	-	4	120	85.90	-1.98	0.75	0.849761
2907	3R_DroMel_CAF1	7,790,631 – 7,790,721	- - - - - - - - -	4686	7,790,631 – 7,790,721	-	6	91	89.79	-2.04	0.84	0.790006
2908	3R_DroMel_CAF1	7,791,528 – 7,791,647	- - - "knownCDS=Parent=FBtr0082509;Name=CG12213-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12213-RA" - - - - -	4687	7,791,528 – 7,791,647	+	6	119	80.11	-1.85	0.70	0.853480
2909	3R_DroMel_CAF1	7,792,969 – 7,793,089	- - - "knownCDS=Parent=FBtr0082509, FBtr0082510;Name=CG12213-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12213-RA, FlyBase+Annotation+IDs:CG12213-RB" - - - - -	4688	7,792,969 – 7,793,089	-	6	120	79.55	-1.59	0.70	0.804600
2910	3R_DroMel_CAF1	7,793,367 – 7,793,459	- - - - - - - - -	4689	7,793,367 – 7,793,459	+	5	110	79.56	-2.39	0.61	0.962862
2910	3R_DroMel_CAF1	7,793,367 – 7,793,459	- - - - - - - - -	4690	7,793,367 – 7,793,459	-	5	110	79.56	-1.63	0.81	0.821586
2911	3R_DroMel_CAF1	7,793,878 – 7,793,968	- - - - - - - - -	4691	7,793,878 – 7,793,968	+	5	109	76.35	-1.81	0.48	0.583452
2912	3R_DroMel_CAF1	7,794,384 – 7,794,484	- - - - - - - - -	4692	7,794,384 – 7,794,484	+	5	106	86.43	-1.83	0.76	0.758093
2913	3R_DroMel_CAF1	7,795,959 – 7,796,062	- - - - - - - - -	4693	7,795,959 – 7,796,062	+	6	115	76.45	-1.47	0.62	0.705989
2914	3R_DroMel_CAF1	7,805,845 – 7,805,935	- - - - - - - - -	4694	7,805,845 – 7,805,935	-	4	96	82.32	-1.60	0.70	0.587066
2915	3R_DroMel_CAF1	7,809,103 – 7,809,212	- - - - - - - - -	4695	7,809,103 – 7,809,212	-	4	116	87.35	-1.51	0.77	0.602951
2916	3R_DroMel_CAF1	7,813,757 – 7,813,855	- - - - - - - - -	4696	7,813,757 – 7,813,855	-	6	111	75.46	-1.82	0.56	0.851851
2917	3R_DroMel_CAF1	7,820,289 – 7,820,379	- - - - - - - - -	4697	7,820,289 – 7,820,379	-	6	90	86.92	-2.17	0.80	0.666372
2918	3R_DroMel_CAF1	7,824,848 – 7,824,940	- - - - - - - - -	4698	7,824,848 – 7,824,940	-	6	111	65.90	-1.94	0.27	0.533859
2919	3R_DroMel_CAF1	7,826,948 – 7,827,048	- - - "knownCDS=Parent=FBtr0082487;Name=Ect3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3132-RA" - - - - -	4699	7,826,948 – 7,827,048	+	6	104	81.97	-1.79	0.68	0.670430
2920	3R_DroMel_CAF1	7,831,489 – 7,831,591	- - - - - - - - -	4700	7,831,489 – 7,831,591	+	6	107	83.64	-3.47	0.79	0.947580
2920	3R_DroMel_CAF1	7,831,489 – 7,831,591	- - - - - - - - -	4701	7,831,489 – 7,831,591	-	6	107	83.64	-2.92	0.77	0.894802
2921	3R_DroMel_CAF1	7,836,773 – 7,836,872	- - - "knownCDS=Parent=FBtr0082536;Name=CG3532-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3532-RA" - - - - -	4702	7,836,773 – 7,836,872	-	6	104	86.49	-2.03	0.83	0.762342
2922	3R_DroMel_CAF1	7,839,231 – 7,839,391	- - - "knownCDS=Parent=FBtr0082536;Name=CG3532-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3532-RA" - - - - -	4703	7,839,231 – 7,839,351	-	6	120	79.39	-1.65	0.60	0.648255
2922	3R_DroMel_CAF1	7,839,231 – 7,839,391		4704	7,839,271 – 7,839,391	-	6	120	81.39	-2.25	0.61	0.769229
2923	3R_DroMel_CAF1	7,844,894 – 7,845,002	- - - - - - - - -	4705	7,844,894 – 7,845,002	-	5	112	73.44	-1.36	0.08	0.535158
2924	3R_DroMel_CAF1	7,846,006 – 7,846,096	- - - - - - - - -	4706	7,846,006 – 7,846,096	+	6	120	77.73	-2.87	0.52	0.983271
2924	3R_DroMel_CAF1	7,846,006 – 7,846,096	- - - - - - - - -	4707	7,846,006 – 7,846,096	-	6	120	77.73	-2.00	0.56	0.853326
2925	3R_DroMel_CAF1	7,846,418 – 7,846,532	- - - - - - - - -	4708	7,846,418 – 7,846,532	+	4	118	88.84	-2.24	0.66	0.646177
2925	3R_DroMel_CAF1	7,846,418 – 7,846,532	- - - - - - - - -	4709	7,846,418 – 7,846,532	-	4	118	88.84	-2.26	0.75	0.880843
2926	3R_DroMel_CAF1	7,847,646 – 7,847,740	- - - - - - - - -	4710	7,847,646 – 7,847,740	-	6	94	83.13	-1.90	0.71	0.636478
2927	3R_DroMel_CAF1	7,852,218 – 7,852,320	- - - - - - - - -	4711	7,852,218 – 7,852,320	+	6	120	81.54	-1.46	0.73	0.639835
2928	3R_DroMel_CAF1	7,853,295 – 7,853,399	- - - - - - - - -	4712	7,853,295 – 7,853,399	+	6	116	81.75	-2.31	0.66	0.812353
2929	3R_DroMel_CAF1	7,857,721 – 7,857,826	- - - - - - - - -	4713	7,857,721 – 7,857,826	-	6	117	83.22	-1.99	0.65	0.543330
2930	3R_DroMel_CAF1	7,858,019 – 7,858,126	- - - - - - - - -	4714	7,858,019 – 7,858,126	+	6	120	77.38	-1.98	0.52	0.762809
2930	3R_DroMel_CAF1	7,858,019 – 7,858,126	- - - - - - - - -	4715	7,858,019 – 7,858,126	-	6	120	77.38	-2.19	0.43	0.641006
2931	3R_DroMel_CAF1	7,860,364 – 7,860,462	- - - "knownCDS=Parent=FBtr0082538;Name=CG14735-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14735-RA" - - - - -	4716	7,860,364 – 7,860,462	+	6	111	74.01	-2.08	0.48	0.914595
2931	3R_DroMel_CAF1	7,860,364 – 7,860,462		4717	7,860,364 – 7,860,462	-	6	111	74.01	-1.71	0.56	0.838997
2932	3R_DroMel_CAF1	7,860,542 – 7,860,645	- - - "knownCDS=Parent=FBtr0082538;Name=CG14735-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14735-RA" - - - - -	4718	7,860,542 – 7,860,645	-	3	103	83.82	-1.56	0.77	0.500000
2933	3R_DroMel_CAF1	7,863,369 – 7,863,463	- - - - - - - - -	4719	7,863,369 – 7,863,463	-	6	115	71.74	-1.94	0.43	0.828375
2934	3R_DroMel_CAF1	7,863,870 – 7,864,011	- - - - - - - - -	4720	7,863,870 – 7,863,976	+	5	119	92.45	-1.57	0.93	0.978138
				4721	7,863,870 – 7,863,976	-	5	119	92.45	-1.17	0.89	0.574845
				4722	7,863,910 – 7,864,011	+	5	119	82.13	-2.81	0.76	0.992821
				4723	7,863,910 – 7,864,011	-	5	119	82.13	-2.04	0.84	0.935658
2935	3R_DroMel_CAF1	7,864,435 – 7,864,525	- - - - - - - - -	4724	7,864,435 – 7,864,525	+	6	120	75.47	-1.56	0.56	0.606128
2936	3R_DroMel_CAF1	7,864,696 – 7,864,825	- - - - - - - - -	4725	7,864,696 – 7,864,803	+	6	119	77.90	-1.80	0.62	0.860145
2936	3R_DroMel_CAF1	7,864,696 – 7,864,825	- - - - - - - - -	4726	7,864,735 – 7,864,825	+	6	101	82.30	-1.76	0.70	0.663624
2937	3R_DroMel_CAF1	7,868,473 – 7,868,593	- - - - - - - - -	4727	7,868,473 – 7,868,593	-	5	120	92.56	-2.12	0.82	0.978711
2938	3R_DroMel_CAF1	7,869,564 – 7,869,661	- - - - - - - - -	4728	7,869,564 – 7,869,661	-	5	109	90.04	-1.92	0.80	0.912578
2939	3R_DroMel_CAF1	7,869,914 – 7,870,015	- - - - - - - - -	4729	7,869,914 – 7,870,015	+	3	101	98.02	-1.78	0.94	0.665035
2940	3R_DroMel_CAF1	7,870,430 – 7,870,686	- - - - - - - - -	4730	7,870,430 – 7,870,546	+	5	120	95.94	-1.33	0.90	0.798329
				4731	7,870,470 – 7,870,573	+	5	120	86.40	-1.63	0.76	0.618505
				4732	7,870,573 – 7,870,686	+	5	120	96.73	-1.71	0.95	0.989449
				4733	7,870,573 – 7,870,686	-	5	120	96.73	-1.96	0.96	0.998129
2941	3R_DroMel_CAF1	7,871,534 – 7,871,685	- - - - - - - - -	4734	7,871,534 – 7,871,651	+	6	120	84.75	-3.21	0.75	0.868312
2941	3R_DroMel_CAF1	7,871,534 – 7,871,685	- - - - - - - - -	4735	7,871,571 – 7,871,685	+	6	115	85.07	-2.72	0.81	0.905154
2942	3R_DroMel_CAF1	7,871,985 – 7,872,171	- - - - - - - - -	4736	7,871,985 – 7,872,091	-	6	120	86.33	-1.98	0.80	0.625322
				4737	7,872,017 – 7,872,131	+	5	114	93.77	-1.38	0.87	0.802327
				4738	7,872,017 – 7,872,131	-	5	114	93.77	-2.84	0.87	0.999551
				4739	7,872,057 – 7,872,171	-	5	114	93.77	-2.06	0.83	0.977139
2943	3R_DroMel_CAF1	7,875,515 – 7,875,610	- - - - - - - - -	4740	7,875,515 – 7,875,610	+	6	108	82.82	-1.75	0.65	0.507699
2944	3R_DroMel_CAF1	7,875,884 – 7,876,004	- - - - - - - - -	4741	7,875,884 – 7,876,004	+	6	120	95.78	-1.61	0.86	0.732837
2945	3R_DroMel_CAF1	7,878,327 – 7,878,422	- - - - - - - - -	4742	7,878,327 – 7,878,422	+	5	101	88.00	-1.86	0.81	0.887169
2946	3R_DroMel_CAF1	7,879,183 – 7,879,299	- - - - - - - - -	4743	7,879,183 – 7,879,299	-	6	118	82.86	-1.44	0.75	0.544792
2947	3R_DroMel_CAF1	7,883,982 – 7,884,074	- - - - - - - - -	4744	7,883,982 – 7,884,074	-	6	119	82.08	-1.52	0.76	0.648911
2948	3R_DroMel_CAF1	7,889,338 – 7,889,445	- - - - - - - - -	4745	7,889,338 – 7,889,445	-	6	112	83.30	-3.06	0.54	0.633559
2949	3R_DroMel_CAF1	7,889,744 – 7,889,843	- - - - - - - - -	4746	7,889,744 – 7,889,843	+	6	118	79.38	-2.71	0.49	0.907659
2950	3R_DroMel_CAF1	7,890,355 – 7,890,463	- - - - - - - - -	4747	7,890,355 – 7,890,463	-	5	109	95.94	-1.39	0.94	0.926204
2951	3R_DroMel_CAF1	7,890,557 – 7,890,660	- - - - - - - - -	4748	7,890,557 – 7,890,660	+	6	120	81.35	-1.97	0.63	0.710157
2952	3R_DroMel_CAF1	7,892,308 – 7,892,413	- - - - - - - - -	4749	7,892,308 – 7,892,413	-	5	115	88.24	-2.93	0.71	0.940357
2953	3R_DroMel_CAF1	7,896,866 – 7,896,961	- - - "knownCDS=Parent=FBtr0082551;Name=CG14741-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14741-RA" - - - - -	4750	7,896,866 – 7,896,961	+	6	103	77.32	-1.15	0.65	0.505800
2954	3R_DroMel_CAF1	7,898,067 – 7,898,178	- - - "knownCDS=Parent=FBtr0082551;Name=CG14741-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14741-RA" - - - - -	4751	7,898,067 – 7,898,178	+	6	111	77.46	-1.67	0.56	0.598223
2955	3R_DroMel_CAF1	7,901,077 – 7,901,184	- - - - - - - - -	4752	7,901,077 – 7,901,184	+	6	113	73.69	-1.37	0.66	0.854181
2955	3R_DroMel_CAF1	7,901,077 – 7,901,184	- - - - - - - - -	4753	7,901,077 – 7,901,184	-	6	113	73.69	-1.81	0.81	0.984741
2956	3R_DroMel_CAF1	7,903,687 – 7,903,807	- - - - - - - - -	4754	7,903,687 – 7,903,807	+	3	120	96.39	-1.48	0.99	0.637673
2957	3R_DroMel_CAF1	7,904,366 – 7,904,500	- - - - - - - - -	4755	7,904,366 – 7,904,460	+	4	94	88.83	-1.78	0.80	0.791502
				4756	7,904,366 – 7,904,460	-	4	94	88.83	-1.51	0.71	0.514612
				4757	7,904,397 – 7,904,500	+	4	103	90.29	-1.60	0.85	0.739410
				4758	7,904,397 – 7,904,500	-	4	103	90.29	-1.70	0.73	0.559958
2958	3R_DroMel_CAF1	7,908,734 – 7,908,826	- - - - - - - - -	4759	7,908,734 – 7,908,826	-	6	104	82.01	-1.72	0.65	0.581796
2959	3R_DroMel_CAF1	7,910,465 – 7,910,578	- - - - - - - - -	4760	7,910,465 – 7,910,578	+	5	117	70.85	-1.94	0.39	0.874243
2960	3R_DroMel_CAF1	7,911,640 – 7,911,758	- - - - - - - - -	4761	7,911,640 – 7,911,758	+	6	120	74.68	-2.06	0.61	0.972257
2961	3R_DroMel_CAF1	7,913,150 – 7,913,256	- - - - - - - - -	4762	7,913,150 – 7,913,256	+	5	111	83.47	-1.56	0.87	0.660169
2962	3R_DroMel_CAF1	7,920,377 – 7,920,476	- - - - - - - - -	4763	7,920,377 – 7,920,476	+	5	99	93.94	-1.99	0.97	0.999495
2962	3R_DroMel_CAF1	7,920,377 – 7,920,476	- - - - - - - - -	4764	7,920,377 – 7,920,476	-	5	99	93.94	-1.52	0.82	0.734788
2963	3R_DroMel_CAF1	7,921,586 – 7,921,755	- - - - - - - - -	4765	7,921,586 – 7,921,681	+	3	95	77.53	-1.14	0.84	0.762842
2963	3R_DroMel_CAF1	7,921,586 – 7,921,755	- - - - - - - - -	4766	7,921,652 – 7,921,755	-	3	103	74.91	-1.63	0.59	0.613281
2964	3R_DroMel_CAF1	7,925,170 – 7,925,278	- - - - - - - - -	4767	7,925,170 – 7,925,278	+	6	113	87.42	-3.17	0.71	0.530112
2965	3R_DroMel_CAF1	7,926,493 – 7,926,594	- - - - - - - - -	4768	7,926,493 – 7,926,594	-	6	120	76.52	-1.49	0.62	0.719748
2966	3R_DroMel_CAF1	7,927,398 – 7,927,491	- - - - - - - - -	4769	7,927,398 – 7,927,491	+	5	101	91.68	-1.80	0.77	0.766508
2967	3R_DroMel_CAF1	7,927,964 – 7,928,083	- - - - - - - - -	4770	7,927,964 – 7,928,083	+	5	119	95.38	-1.32	0.94	0.885103
2968	3R_DroMel_CAF1	7,929,014 – 7,929,167	- - - - - - - - -	4771	7,929,014 – 7,929,127	+	5	113	98.05	-1.51	0.99	0.960199
				4772	7,929,014 – 7,929,127	-	5	113	98.05	-2.06	0.97	0.998271
				4773	7,929,049 – 7,929,167	-	5	118	96.19	-1.80	0.94	0.994678
2969	3R_DroMel_CAF1	7,929,795 – 7,929,948	- - - - - - - - -	4774	7,929,795 – 7,929,912	-	5	120	88.89	-2.54	0.76	0.960246
2969	3R_DroMel_CAF1	7,929,795 – 7,929,948	- - - - - - - - -	4775	7,929,832 – 7,929,948	-	5	120	89.63	-2.11	0.72	0.727006
2970	3R_DroMel_CAF1	7,930,398 – 7,930,597	- - - - - - - - -	4776	7,930,398 – 7,930,518	+	5	120	97.67	-1.73	0.95	0.984653
				4777	7,930,438 – 7,930,558	+	5	120	99.00	-1.65	0.99	0.968683
				4778	7,930,438 – 7,930,558	-	5	120	99.00	-1.69	0.90	0.884923
				4779	7,930,478 – 7,930,597	-	5	120	97.49	-1.71	0.88	0.930765
2971	3R_DroMel_CAF1	7,930,988 – 7,931,182	- - - - - - - - -	4780	7,930,988 – 7,931,082	-	5	94	88.30	-1.78	0.70	0.528807
				4781	7,931,042 – 7,931,153	+	4	111	84.83	-2.04	0.69	0.824860
				4782	7,931,082 – 7,931,182	+	4	104	85.67	-1.82	0.65	0.619063
2972	3R_DroMel_CAF1	7,931,609 – 7,931,762	- - - - - - - - -	4783	7,931,609 – 7,931,723	+	5	120	89.35	-2.92	0.90	0.999821
				4784	7,931,609 – 7,931,723	-	5	120	89.35	-3.58	0.78	0.997951
				4785	7,931,643 – 7,931,762	+	5	120	86.35	-2.61	0.77	0.981147
				4786	7,931,643 – 7,931,762	-	5	120	86.35	-2.44	0.67	0.821019
2973	3R_DroMel_CAF1	7,931,797 – 7,931,912	- - - - - - - - -	4787	7,931,797 – 7,931,912	+	4	120	85.67	-3.04	0.57	0.756486
2973	3R_DroMel_CAF1	7,931,797 – 7,931,912	- - - - - - - - -	4788	7,931,797 – 7,931,912	-	4	120	85.67	-2.05	0.67	0.772958
2974	3R_DroMel_CAF1	7,932,152 – 7,932,267	- - - - - - - - -	4789	7,932,152 – 7,932,267	+	3	115	92.44	-3.07	0.69	0.528538
2975	3R_DroMel_CAF1	7,945,895 – 7,945,992	- - - - - - - - -	4790	7,945,895 – 7,945,992	-	4	109	88.87	-1.55	0.87	0.713580
2976	3R_DroMel_CAF1	7,947,552 – 7,947,650	- - - - - - - - -	4791	7,947,552 – 7,947,650	+	6	103	80.51	-2.06	0.72	0.886814
2977	3R_DroMel_CAF1	7,957,046 – 7,957,166	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000212;Name=Dmel_Lys_TTT_14000212;TFAMID=DmelKTTT-7957077" "tRNAscan=type:Lys:anticodon:TTT f:7957076_t:7957178_strand=+_cove=84.31" - - "Rfam=AC005555.1/11419-11491_RF00005;tRNA;\|1e-30" - - - "Flybase=FBgn0011904:transfer_RNA:lys5:84AB:cytosolic_tRNA_gene\|3e-37"	4792	7,957,046 – 7,957,166	+	3	120	88.89	-1.39	0.94	0.663255
2977	3R_DroMel_CAF1	7,957,046 – 7,957,166		4793	7,957,046 – 7,957,166	-	3	120	88.89	-1.91	0.87	0.726505
2978	3R_DroMel_CAF1	7,957,315 – 7,957,455	- - - - - - - - -	4794	7,957,315 – 7,957,415	+	3	106	89.14	-2.88	0.80	0.894618
2978	3R_DroMel_CAF1	7,957,315 – 7,957,455	- - - - - - - - -	4795	7,957,350 – 7,957,455	+	4	107	79.84	-2.19	0.58	0.813205
2979	3R_DroMel_CAF1	7,958,954 – 7,959,051	- - - - - - - - -	4796	7,958,954 – 7,959,051	-	6	106	79.56	-1.18	0.71	0.594896
2980	3R_DroMel_CAF1	7,963,193 – 7,963,284	- - - - - - - - -	4797	7,963,193 – 7,963,284	+	6	91	92.31	-1.36	0.87	0.560430
2981	3R_DroMel_CAF1	7,964,492 – 7,964,583	- - - - - - - - -	4798	7,964,492 – 7,964,583	+	4	91	83.70	-1.39	0.94	0.752298
2982	3R_DroMel_CAF1	7,967,768 – 7,967,863	- - - - - - - - -	4799	7,967,768 – 7,967,863	-	6	115	78.54	-1.15	0.66	0.500000
2983	3R_DroMel_CAF1	7,987,850 – 7,987,946	- - - - - - - - -	4800	7,987,850 – 7,987,946	+	6	98	88.40	-2.50	0.79	0.695280
2984	3R_DroMel_CAF1	7,989,659 – 7,989,761	- - - "knownCDS=Parent=FBtr0082547;Name=Cpn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4795-RA" - - - - -	4801	7,989,659 – 7,989,761	+	5	108	79.57	-1.91	0.50	0.547138
2985	3R_DroMel_CAF1	7,991,361 – 7,991,462	- - - - - - - - -	4802	7,991,361 – 7,991,462	+	6	111	80.89	-1.88	0.57	0.567936
2985	3R_DroMel_CAF1	7,991,361 – 7,991,462	- - - - - - - - -	4803	7,991,361 – 7,991,462	-	6	111	80.89	-2.31	0.61	0.826834
2986	3R_DroMel_CAF1	7,993,675 – 7,993,782	- - - - - - - - -	4804	7,993,675 – 7,993,782	+	6	120	80.31	-2.43	0.65	0.918350
2986	3R_DroMel_CAF1	7,993,675 – 7,993,782	- - - - - - - - -	4805	7,993,675 – 7,993,782	-	6	120	80.31	-2.38	0.67	0.918818
2987	3R_DroMel_CAF1	8,000,357 – 8,000,471	- - - - - - - - -	4806	8,000,357 – 8,000,471	-	6	117	80.92	-1.88	0.59	0.608532
2988	3R_DroMel_CAF1	8,000,757 – 8,000,847	- - - - - - - - -	4807	8,000,757 – 8,000,847	+	6	103	78.66	-1.97	0.60	0.856728
2989	3R_DroMel_CAF1	8,004,860 – 8,004,989	- - - - - - - - -	4808	8,004,860 – 8,004,971	-	6	116	81.50	-1.65	0.69	0.688398
2989	3R_DroMel_CAF1	8,004,860 – 8,004,989	- - - - - - - - -	4809	8,004,895 – 8,004,989	+	6	109	68.91	-1.15	0.60	0.537255
2990	3R_DroMel_CAF1	8,005,457 – 8,005,562	- - - - - - - - -	4810	8,005,457 – 8,005,562	-	6	115	81.02	-1.63	0.62	0.546554
2991	3R_DroMel_CAF1	8,014,644 – 8,014,735	- - - - - - - - -	4811	8,014,644 – 8,014,735	-	6	93	83.42	-1.64	0.70	0.506318
2992	3R_DroMel_CAF1	8,015,430 – 8,015,522	- - - - - - - - -	4812	8,015,430 – 8,015,522	+	3	94	86.88	-2.16	0.85	0.836102
2993	3R_DroMel_CAF1	8,017,660 – 8,017,796	- - - - - - - - -	4813	8,017,660 – 8,017,762	+	5	108	86.87	-3.82	0.67	0.978655
				4814	8,017,660 – 8,017,762	-	5	108	86.87	-2.85	0.65	0.843031
				4815	8,017,690 – 8,017,796	+	5	106	93.77	-2.20	0.81	0.969190
				4816	8,017,690 – 8,017,796	-	5	106	93.77	-2.69	0.87	0.999365
2994	3R_DroMel_CAF1	8,022,185 – 8,022,315	- - - - - - - - -	4817	8,022,185 – 8,022,278	+	6	106	86.62	-3.63	0.84	0.986135
				4818	8,022,185 – 8,022,278	-	6	106	86.62	-3.46	0.84	0.983165
				4819	8,022,198 – 8,022,315	-	6	120	83.48	-2.59	0.70	0.761898
2995	3R_DroMel_CAF1	8,023,221 – 8,023,312	- - - - - - - - -	4820	8,023,221 – 8,023,312	+	6	99	81.06	-1.47	0.66	0.581012
2996	3R_DroMel_CAF1	8,025,443 – 8,025,541	- - - - - - - - -	4821	8,025,443 – 8,025,541	+	6	99	80.84	-2.12	0.53	0.562306
2997	3R_DroMel_CAF1	8,029,535 – 8,029,633	- - - - - - - - -	4822	8,029,535 – 8,029,633	+	6	105	79.80	-2.19	0.61	0.878105
2997	3R_DroMel_CAF1	8,029,535 – 8,029,633	- - - - - - - - -	4823	8,029,535 – 8,029,633	-	6	105	79.80	-2.72	0.60	0.947848
2998	3R_DroMel_CAF1	8,031,849 – 8,031,987	- - - - - - - - -	4824	8,031,849 – 8,031,959	+	5	110	85.32	-2.06	0.71	0.791573
2998	3R_DroMel_CAF1	8,031,849 – 8,031,987	- - - - - - - - -	4825	8,031,879 – 8,031,987	-	5	109	83.30	-1.87	0.87	0.889089
2999	3R_DroMel_CAF1	8,032,131 – 8,032,226	- - - - - - - - -	4826	8,032,131 – 8,032,226	-	6	109	81.37	-2.39	0.55	0.695505
3000	3R_DroMel_CAF1	8,032,269 – 8,032,401	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000213;Name=Dmel_Thr_TGT_14000213;TFAMID=DmelTTGT-8032297" "tRNAscan=type:Thr:anticodon:TGT f:8032296_t:8032394_strand=+_cove=74.00" - - "Rfam=AE003695.2/2735-2806_RF00005;tRNA;\|1e-34" - - - "Flybase=FBgn0051356:CR31356:cytosolic_tRNA_gene\|1e-36"	4827	8,032,269 – 8,032,377	+	6	120	75.49	-1.45	0.79	0.948017
				4828	8,032,269 – 8,032,377	-	6	120	75.49	-2.32	0.75	0.987775
				4829	8,032,301 – 8,032,401	-	6	108	78.80	-1.43	0.84	0.852953
3001	3R_DroMel_CAF1	8,035,728 – 8,035,847	- - - "knownCDS=Parent=FBtr0082625;Name=CG4830-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4830-RA" - - - - -	4830	8,035,728 – 8,035,847	+	6	120	77.68	-1.54	0.57	0.515092
3002	3R_DroMel_CAF1	8,037,350 – 8,037,473	- - - - - - - - -	4831	8,037,350 – 8,037,446	+	5	120	82.57	-2.30	0.62	0.866039
3002	3R_DroMel_CAF1	8,037,350 – 8,037,473	- - - - - - - - -	4832	8,037,371 – 8,037,473	+	5	120	85.61	-1.68	0.69	0.538576
3003	3R_DroMel_CAF1	8,042,694 – 8,042,794	- - - "knownCDS=Parent=FBtr0082624;Name=CG4848-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4848-RA" - - - - -	4833	8,042,694 – 8,042,794	+	6	100	79.80	-2.24	0.53	0.746276
3004	3R_DroMel_CAF1	8,043,572 – 8,043,692	- - - "knownCDS=Parent=FBtr0082624;Name=CG4848-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4848-RA" - - - - -	4834	8,043,572 – 8,043,692	+	6	120	78.72	-1.32	0.63	0.521330
3005	3R_DroMel_CAF1	8,045,189 – 8,045,331	- - - "knownCDS=Parent=FBtr0082624;Name=CG4848-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4848-RA" - - - - -	4835	8,045,189 – 8,045,309	+	6	120	79.00	-1.42	0.64	0.614580
				4836	8,045,189 – 8,045,309	-	6	120	79.00	-1.83	0.67	0.878915
				4837	8,045,229 – 8,045,331	+	6	103	77.98	-2.71	0.61	0.981985
				4838	8,045,229 – 8,045,331	-	6	103	77.98	-2.22	0.63	0.953478
3006	3R_DroMel_CAF1	8,046,615 – 8,046,724	- - - "knownCDS=Parent=FBtr0082623;Name=CG4860-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4860-RA" - - - - -	4839	8,046,615 – 8,046,724	-	6	111	79.50	-1.50	0.66	0.692624
3007	3R_DroMel_CAF1	8,053,841 – 8,053,939	- - - - - - - - -	4840	8,053,841 – 8,053,939	+	3	98	83.57	-2.34	0.90	0.978916
3007	3R_DroMel_CAF1	8,053,841 – 8,053,939	- - - - - - - - -	4841	8,053,841 – 8,053,939	-	3	98	83.57	-3.29	0.82	0.989569
3008	3R_DroMel_CAF1	8,054,281 – 8,054,395	- - - - - - - - -	4842	8,054,281 – 8,054,395	+	6	120	89.92	-1.28	0.89	0.575170
3009	3R_DroMel_CAF1	8,054,509 – 8,054,607	- - - - - - - - -	4843	8,054,509 – 8,054,607	+	6	109	83.27	-2.65	0.57	0.555938
3010	3R_DroMel_CAF1	8,055,748 – 8,055,846	- - - - - - - - -	4844	8,055,748 – 8,055,846	+	6	108	77.40	-0.96	0.74	0.604836
3011	3R_DroMel_CAF1	8,057,217 – 8,057,312	- - - - - - - - -	4845	8,057,217 – 8,057,312	-	6	104	79.35	-2.09	0.54	0.746239
3012	3R_DroMel_CAF1	8,061,430 – 8,061,548	- - - "knownCDS=Parent=FBtr0082618;Name=Cyp313a2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10094-RA" - - - - -	4846	8,061,430 – 8,061,548	+	6	120	79.83	-1.41	0.63	0.537783
3013	3R_DroMel_CAF1	8,063,861 – 8,063,969	- - - "knownCDS=Parent=FBtr0082617;Name=Cyp313a3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10093-RA" - - - - -	4847	8,063,861 – 8,063,969	+	6	120	73.10	-2.24	0.27	0.580144
3014	3R_DroMel_CAF1	8,064,673 – 8,064,793	- - - "knownCDS=Parent=FBtr0082617;Name=Cyp313a3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10093-RA" - - - - -	4848	8,064,673 – 8,064,793	-	6	120	79.72	-1.38	0.69	0.664236
3015	3R_DroMel_CAF1	8,065,108 – 8,065,223	- - - - - - - - -	4849	8,065,108 – 8,065,223	-	6	119	81.49	-2.38	0.58	0.753821
3016	3R_DroMel_CAF1	8,065,771 – 8,065,941	- - - "knownCDS=texon3424;Parent=CG_NCBI_GNO_32226546, CG_DGIL_SNO_28364721" - - - - -	4850	8,065,771 – 8,065,867	+	5	98	82.74	-1.88	0.73	0.785105
				4851	8,065,771 – 8,065,867	-	5	98	82.74	-2.12	0.66	0.839416
				4852	8,065,827 – 8,065,941	+	6	120	82.01	-1.68	0.74	0.704311
3017	3R_DroMel_CAF1	8,066,725 – 8,066,848	- - - - - - - - -	4853	8,066,725 – 8,066,825	+	5	111	88.21	-1.64	0.73	0.545986
				4854	8,066,758 – 8,066,848	+	5	108	83.69	-1.86	0.61	0.500000
				4855	8,066,758 – 8,066,848	-	5	108	83.69	-1.96	0.76	0.848589
3018	3R_DroMel_CAF1	8,067,125 – 8,067,221	- - - - - - - - -	4856	8,067,125 – 8,067,221	+	5	102	85.74	-1.82	0.67	0.560971
3019	3R_DroMel_CAF1	8,067,907 – 8,068,027	- - - - - - - - -	4857	8,067,907 – 8,068,027	+	6	120	96.22	-1.38	0.92	0.926866
3020	3R_DroMel_CAF1	8,071,297 – 8,071,410	- - - - - - - - -	4858	8,071,297 – 8,071,410	+	6	120	78.80	-2.69	0.45	0.889671
3021	3R_DroMel_CAF1	8,073,228 – 8,073,388	- - - - - - - - -	4859	8,073,228 – 8,073,319	+	6	120	76.54	-1.82	0.67	0.940673
				4860	8,073,228 – 8,073,319	-	6	120	76.54	-2.10	0.63	0.962661
				4861	8,073,293 – 8,073,388	+	6	113	80.16	-1.67	0.62	0.658662
				4862	8,073,293 – 8,073,388	-	6	113	80.16	-1.85	0.63	0.758617
3022	3R_DroMel_CAF1	8,073,735 – 8,073,851	- - - - - - - - -	4863	8,073,735 – 8,073,851	+	5	116	92.13	-2.37	0.91	0.999538
3022	3R_DroMel_CAF1	8,073,735 – 8,073,851	- - - - - - - - -	4864	8,073,735 – 8,073,851	-	5	116	92.13	-3.40	0.93	0.999984
3023	3R_DroMel_CAF1	8,075,726 – 8,075,839	- - - - - - - - -	4865	8,075,726 – 8,075,839	-	5	114	84.83	-1.65	0.67	0.500000
3024	3R_DroMel_CAF1	8,075,879 – 8,075,996	- - - - - - - - -	4866	8,075,879 – 8,075,996	+	6	120	83.11	-2.16	0.63	0.572707
3024	3R_DroMel_CAF1	8,075,879 – 8,075,996	- - - - - - - - -	4867	8,075,879 – 8,075,996	-	6	120	83.11	-2.32	0.68	0.700615
3025	3R_DroMel_CAF1	8,076,308 – 8,076,440	- - - - - - - - -	4868	8,076,308 – 8,076,405	+	5	103	78.67	-1.80	0.59	0.672293
3025	3R_DroMel_CAF1	8,076,308 – 8,076,440	- - - - - - - - -	4869	8,076,347 – 8,076,440	+	5	101	81.70	-2.37	0.71	0.959786
3026	3R_DroMel_CAF1	8,076,962 – 8,077,060	- - - - - - - - -	4870	8,076,962 – 8,077,060	-	3	109	76.58	-2.10	0.56	0.773739
3027	3R_DroMel_CAF1	8,077,769 – 8,077,887	- - - - - - - - -	4871	8,077,769 – 8,077,887	-	5	120	79.84	-2.15	0.53	0.807064
3028	3R_DroMel_CAF1	8,078,259 – 8,078,354	- - - - - - - - -	4872	8,078,259 – 8,078,354	-	5	120	74.06	-2.05	0.33	0.927057
3029	3R_DroMel_CAF1	8,079,175 – 8,079,295	- - - - - - - - -	4873	8,079,175 – 8,079,295	+	4	120	96.11	-1.84	0.88	0.732424
3030	3R_DroMel_CAF1	8,079,574 – 8,079,692	- - - - - - - - -	4874	8,079,574 – 8,079,692	-	4	120	88.24	-2.06	0.89	0.953423
3031	3R_DroMel_CAF1	8,080,136 – 8,080,290	- - - "knownCDS=Parent=FBtr0082561;Name=CG3942-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3942-RA" - - - - -	4875	8,080,136 – 8,080,256	-	6	120	82.44	-2.00	0.64	0.619154
3031	3R_DroMel_CAF1	8,080,136 – 8,080,290		4876	8,080,176 – 8,080,290	-	6	120	79.25	-2.03	0.62	0.870178
3032	3R_DroMel_CAF1	8,081,526 – 8,081,636	- - - "knownCDS=Parent=FBtr0082561;Name=CG3942-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3942-RA" - - - - -	4877	8,081,526 – 8,081,636	-	6	116	82.14	-1.43	0.68	0.517140
3033	3R_DroMel_CAF1	8,082,761 – 8,082,896	- - - - - - - - -	4878	8,082,761 – 8,082,879	+	5	118	97.63	-2.42	0.98	0.999759
				4879	8,082,761 – 8,082,879	-	5	118	97.63	-1.43	0.94	0.894730
				4880	8,082,801 – 8,082,896	+	5	95	98.32	-2.52	0.97	0.999629
				4881	8,082,801 – 8,082,896	-	5	95	98.32	-2.12	0.95	0.997261
3034	3R_DroMel_CAF1	8,083,038 – 8,083,158	- - - - - - - - -	4882	8,083,038 – 8,083,158	-	5	120	97.00	-1.18	0.97	0.738727
3035	3R_DroMel_CAF1	8,083,624 – 8,083,824	- - - - - - - - -	4883	8,083,624 – 8,083,744	-	5	120	96.50	-1.11	0.95	0.598385
				4884	8,083,664 – 8,083,784	+	5	120	99.67	-1.23	0.99	0.525435
				4885	8,083,664 – 8,083,784	-	5	120	99.67	-2.05	1.00	0.995005
				4886	8,083,704 – 8,083,824	+	5	120	99.67	-1.58	0.98	0.919795
				4887	8,083,704 – 8,083,824	-	5	120	99.67	-1.53	1.00	0.911789
3036	3R_DroMel_CAF1	8,084,702 – 8,084,816	- - - - - - - - -	4888	8,084,702 – 8,084,816	+	5	120	95.70	-1.25	0.94	0.819871
3037	3R_DroMel_CAF1	8,085,049 – 8,085,431	- - - - - - - - -	4889	8,085,049 – 8,085,155	+	5	120	86.27	-1.60	0.72	0.533140
				4890	8,085,155 – 8,085,271	-	5	120	94.88	-1.31	0.95	0.903599
				4891	8,085,191 – 8,085,311	+	5	120	99.00	-1.85	0.98	0.989125
				4892	8,085,231 – 8,085,351	+	5	120	99.33	-1.66	0.96	0.944037
				4893	8,085,231 – 8,085,351	-	5	120	99.33	-1.36	0.97	0.740499
				4894	8,085,311 – 8,085,431	-	5	120	97.83	-1.66	0.99	0.987790
3038	3R_DroMel_CAF1	8,085,670 – 8,086,164	- - - - - - - - -	4895	8,085,670 – 8,085,782	-	5	120	93.49	-3.19	0.93	0.999978
				4896	8,085,702 – 8,085,822	-	5	120	95.75	-2.55	0.91	0.999685
				4897	8,085,742 – 8,085,857	+	5	120	95.59	-1.34	0.84	0.500000
				4898	8,085,857 – 8,085,968	+	5	120	90.29	-2.01	0.78	0.903392
				4899	8,085,968 – 8,086,088	+	5	120	96.42	-1.23	0.97	0.846194
				4900	8,086,008 – 8,086,128	+	5	120	93.42	-1.41	0.82	0.641365
				4901	8,086,008 – 8,086,128	-	5	120	93.42	-1.24	0.93	0.813346
				4902	8,086,048 – 8,086,164	+	5	120	92.18	-2.35	0.74	0.812554
3039	3R_DroMel_CAF1	8,086,511 – 8,087,023	- - - - - - - - -	4903	8,086,511 – 8,086,631	+	5	120	95.92	-2.65	0.92	0.999790
				4904	8,086,511 – 8,086,631	-	5	120	95.92	-2.31	0.89	0.998078
				4905	8,086,551 – 8,086,670	+	5	120	97.82	-3.38	0.98	0.999951
				4906	8,086,551 – 8,086,670	-	5	120	97.82	-2.60	0.96	0.999781
				4907	8,086,591 – 8,086,710	+	5	120	97.65	-1.60	0.92	0.940304
				4908	8,086,591 – 8,086,710	-	5	120	97.65	-2.44	0.94	0.999461
				4909	8,086,710 – 8,086,825	-	5	120	95.38	-1.25	0.90	0.704974
				4910	8,086,750 – 8,086,865	+	5	120	94.87	-1.77	0.87	0.968128
				4911	8,086,750 – 8,086,865	-	5	120	94.87	-2.56	0.98	0.999969
				4912	8,086,790 – 8,086,905	-	5	120	95.73	-1.87	0.86	0.966352
				4913	8,086,905 – 8,087,023	-	4	120	86.48	-1.58	0.67	0.539909
3040	3R_DroMel_CAF1	8,087,329 – 8,087,446	- - - - - - - - -	4914	8,087,329 – 8,087,446	-	5	120	94.75	-1.31	0.88	0.705141
3041	3R_DroMel_CAF1	8,088,290 – 8,088,410	- - - - - - - - -	4915	8,088,290 – 8,088,410	+	5	120	97.00	-1.14	0.95	0.623179
3041	3R_DroMel_CAF1	8,088,290 – 8,088,410	- - - - - - - - -	4916	8,088,290 – 8,088,410	-	5	120	97.00	-2.44	0.94	0.999578
3042	3R_DroMel_CAF1	8,088,490 – 8,088,591	- - - - - - - - -	4917	8,088,490 – 8,088,591	+	5	120	77.59	-1.60	0.74	0.841560
3043	3R_DroMel_CAF1	8,088,831 – 8,088,936	- - - - - - - - -	4918	8,088,831 – 8,088,936	-	5	120	89.04	-1.96	0.91	0.990249
3044	3R_DroMel_CAF1	8,089,403 – 8,089,523	- - - - - - - - -	4919	8,089,403 – 8,089,523	-	5	120	97.83	-1.29	0.98	0.831664
3045	3R_DroMel_CAF1	8,089,866 – 8,089,986	- - - - - - - - -	4920	8,089,866 – 8,089,986	+	5	120	92.73	-2.12	0.79	0.941014
3046	3R_DroMel_CAF1	8,090,587 – 8,090,707	- - - - - - - - -	4921	8,090,587 – 8,090,707	+	5	120	93.36	-1.10	0.93	0.596404
3047	3R_DroMel_CAF1	8,090,787 – 8,090,964	- - - - - - - - -	4922	8,090,787 – 8,090,884	+	5	120	77.67	-3.04	0.71	0.998950
				4923	8,090,787 – 8,090,884	-	5	120	77.67	-2.20	0.62	0.960960
				4924	8,090,827 – 8,090,924	+	5	120	77.29	-4.44	0.72	0.999706
				4925	8,090,827 – 8,090,924	-	5	120	77.29	-2.67	0.68	0.996955
				4926	8,090,860 – 8,090,964	+	5	120	84.04	-2.79	0.84	0.996041
3048	3R_DroMel_CAF1	8,091,099 – 8,091,219	- - - - - - - - -	4927	8,091,099 – 8,091,219	+	5	120	97.67	-1.69	0.94	0.975257
3048	3R_DroMel_CAF1	8,091,099 – 8,091,219	- - - - - - - - -	4928	8,091,099 – 8,091,219	-	5	120	97.67	-1.38	0.92	0.796817
3049	3R_DroMel_CAF1	8,091,255 – 8,091,633	- - - - - - - - -	4929	8,091,255 – 8,091,360	+	4	120	88.35	-1.37	0.83	0.527955
				4930	8,091,328 – 8,091,440	+	5	120	86.60	-1.46	0.89	0.649791
				4931	8,091,360 – 8,091,480	+	5	120	91.92	-2.48	0.82	0.992315
				4932	8,091,360 – 8,091,480	-	5	120	91.92	-1.43	0.80	0.566769
				4933	8,091,400 – 8,091,520	-	5	120	96.00	-1.41	0.95	0.940043
				4934	8,091,520 – 8,091,633	+	5	120	92.36	-1.21	0.88	0.600223
3050	3R_DroMel_CAF1	8,091,823 – 8,091,941	- - - - - - - - -	4935	8,091,823 – 8,091,941	+	5	120	80.18	-1.52	0.77	0.664033
3051	3R_DroMel_CAF1	8,093,184 – 8,093,384	- - - - - - - - -	4936	8,093,184 – 8,093,304	+	5	120	97.47	-1.92	0.99	0.997902
				4937	8,093,224 – 8,093,344	+	5	120	98.17	-3.41	0.96	0.999901
				4938	8,093,224 – 8,093,344	-	5	120	98.17	-2.55	1.00	0.999825
				4939	8,093,264 – 8,093,384	+	5	120	97.00	-2.31	0.96	0.999615
				4940	8,093,264 – 8,093,384	-	5	120	97.00	-1.44	0.88	0.767337
3052	3R_DroMel_CAF1	8,094,004 – 8,094,123	- - - - - - - - -	4941	8,094,004 – 8,094,123	+	5	120	94.90	-1.29	0.88	0.714429
3053	3R_DroMel_CAF1	8,094,584 – 8,094,704	- - - - - - - - -	4942	8,094,584 – 8,094,704	+	5	120	95.82	-1.42	0.84	0.638114
3054	3R_DroMel_CAF1	8,094,726 – 8,094,829	- - - - - - - - -	4943	8,094,726 – 8,094,829	+	5	103	94.35	-1.36	0.89	0.835911
3054	3R_DroMel_CAF1	8,094,726 – 8,094,829	- - - - - - - - -	4944	8,094,726 – 8,094,829	-	5	103	94.35	-1.14	0.93	0.670899
3055	3R_DroMel_CAF1	8,094,943 – 8,095,054	- - - - - - - - -	4945	8,094,943 – 8,095,054	-	4	113	87.80	-2.26	0.65	0.686376
3056	3R_DroMel_CAF1	8,095,244 – 8,095,350	- - - - - - - - -	4946	8,095,244 – 8,095,350	+	5	120	87.37	-2.52	0.65	0.698064
3057	3R_DroMel_CAF1	8,095,643 – 8,095,760	- - - - - - - - -	4947	8,095,643 – 8,095,760	+	5	120	93.20	-1.53	0.79	0.585363
3058	3R_DroMel_CAF1	8,096,863 – 8,096,980	- - - "knownCDS=Parent=FBtr0082565;Name=CG17738-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17738-RA" - - - - -	4948	8,096,863 – 8,096,980	+	4	120	90.58	-1.63	0.73	0.528464
3059	3R_DroMel_CAF1	8,097,559 – 8,097,792	- - - - - - - - -	4949	8,097,559 – 8,097,672	+	5	120	95.34	-1.33	0.87	0.704367
				4950	8,097,559 – 8,097,672	-	5	120	95.34	-1.53	0.94	0.972622
				4951	8,097,632 – 8,097,752	-	5	120	96.67	-1.19	0.95	0.708640
				4952	8,097,672 – 8,097,792	-	5	120	95.17	-1.57	0.89	0.941409
3060	3R_DroMel_CAF1	8,097,899 – 8,098,019	- - - - - - - - -	4953	8,097,899 – 8,098,019	+	5	120	98.67	-1.59	0.93	0.906916
3060	3R_DroMel_CAF1	8,097,899 – 8,098,019	- - - - - - - - -	4954	8,097,899 – 8,098,019	-	5	120	98.67	-1.49	0.91	0.764146
3061	3R_DroMel_CAF1	8,098,287 – 8,098,458	- - - - - - - - -	4955	8,098,287 – 8,098,386	+	5	120	81.03	-2.37	0.62	0.938210
				4956	8,098,287 – 8,098,386	-	5	120	81.03	-1.91	0.87	0.922471
				4957	8,098,320 – 8,098,426	-	5	120	89.07	-1.58	0.89	0.890822
				4958	8,098,350 – 8,098,458	-	5	120	91.15	-2.01	0.77	0.856250
3062	3R_DroMel_CAF1	8,099,401 – 8,099,521	- - - - - - - - -	4959	8,099,401 – 8,099,521	+	5	120	92.17	-1.44	0.83	0.700114
3063	3R_DroMel_CAF1	8,099,732 – 8,099,979	- - - - - - - - -	4960	8,099,732 – 8,099,849	+	5	120	96.70	-1.72	0.87	0.928240
				4961	8,099,732 – 8,099,849	-	5	120	96.70	-1.53	0.86	0.782570
				4962	8,099,812 – 8,099,907	+	5	120	84.19	-2.30	0.67	0.859764
				4963	8,099,871 – 8,099,979	+	5	120	90.00	-2.00	0.86	0.982828
3064	3R_DroMel_CAF1	8,100,083 – 8,100,242	- - - - - - - - -	4964	8,100,083 – 8,100,202	+	5	120	93.30	-2.34	0.85	0.995959
				4965	8,100,083 – 8,100,202	-	5	120	93.30	-2.45	0.80	0.982981
				4966	8,100,122 – 8,100,242	+	5	120	95.50	-1.92	0.91	0.994494
				4967	8,100,122 – 8,100,242	-	5	120	95.50	-1.47	0.84	0.705275
3065	3R_DroMel_CAF1	8,100,543 – 8,100,703	- - - - - - - - -	4968	8,100,543 – 8,100,663	+	5	120	97.83	-2.03	0.96	0.997743
3065	3R_DroMel_CAF1	8,100,543 – 8,100,703	- - - - - - - - -	4969	8,100,583 – 8,100,703	-	5	120	96.67	-1.88	0.84	0.921329
3066	3R_DroMel_CAF1	8,101,786 – 8,102,170	- - - - - - - - -	4970	8,101,786 – 8,101,906	-	5	120	94.00	-1.47	0.82	0.672238
				4971	8,101,866 – 8,101,970	+	5	120	85.78	-2.93	0.73	0.981349
				4972	8,101,866 – 8,101,970	-	5	120	85.78	-1.94	0.79	0.863116
				4973	8,101,906 – 8,102,010	+	5	120	86.50	-1.78	0.71	0.613191
				4974	8,101,906 – 8,102,010	-	5	120	86.50	-1.59	0.73	0.536159
				4975	8,101,937 – 8,102,050	+	5	120	92.13	-2.20	0.93	0.999387
				4976	8,102,050 – 8,102,170	-	5	120	97.50	-1.53	0.87	0.777334
3067	3R_DroMel_CAF1	8,102,286 – 8,102,551	- - - - - - - - -	4977	8,102,286 – 8,102,406	+	5	120	93.42	-1.64	0.80	0.752047
				4978	8,102,406 – 8,102,513	-	5	120	90.45	-1.48	0.82	0.713845
				4979	8,102,433 – 8,102,551	+	5	120	90.62	-1.54	0.91	0.931382
3068	3R_DroMel_CAF1	8,103,009 – 8,103,148	- - - - - - - - -	4980	8,103,009 – 8,103,108	-	5	109	89.67	-1.73	0.78	0.782803
				4981	8,103,038 – 8,103,148	+	5	120	92.26	-1.38	0.85	0.710984
				4982	8,103,038 – 8,103,148	-	5	120	92.26	-1.29	0.96	0.888869
3069	3R_DroMel_CAF1	8,103,685 – 8,103,775	- - - - - - - - -	4983	8,103,685 – 8,103,775	+	5	120	76.86	-2.18	0.42	0.911784
3069	3R_DroMel_CAF1	8,103,685 – 8,103,775	- - - - - - - - -	4984	8,103,685 – 8,103,775	-	5	120	76.86	-1.93	0.55	0.811217
3070	3R_DroMel_CAF1	8,104,115 – 8,104,228	- - - - - - - - -	4985	8,104,115 – 8,104,228	+	4	113	90.71	-1.38	0.91	0.626421
3071	3R_DroMel_CAF1	8,104,268 – 8,104,524	- - - - - - - - -	4986	8,104,268 – 8,104,376	+	5	120	86.48	-1.80	0.88	0.913358
				4987	8,104,298 – 8,104,416	+	5	120	97.64	-3.61	0.98	0.999959
				4988	8,104,416 – 8,104,524	-	4	120	84.15	-1.45	0.81	0.543123
3072	3R_DroMel_CAF1	8,104,644 – 8,104,754	- - - - - - - - -	4989	8,104,644 – 8,104,754	+	5	120	89.40	-1.56	0.74	0.528521
3073	3R_DroMel_CAF1	8,105,063 – 8,105,161	- - "RNAmicro=f:8105063_t:8105182_strand:+_p:0.927218" - - - - - -	4990	8,105,063 – 8,105,161	-	5	120	77.49	-2.12	0.62	0.946407
3074	3R_DroMel_CAF1	8,107,889 – 8,107,988	- - - "knownCDS=Parent=FBtr0082564;Name=svp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11502-RB" - - - - -	4991	8,107,889 – 8,107,988	+	6	120	76.53	-0.89	0.71	0.500000
3075	3R_DroMel_CAF1	8,108,053 – 8,108,195	- - - - - - - - -	4992	8,108,053 – 8,108,173	+	5	120	71.22	-2.21	0.43	0.979100
3075	3R_DroMel_CAF1	8,108,053 – 8,108,195	- - - - - - - - -	4993	8,108,093 – 8,108,195	+	5	102	84.84	-1.80	0.68	0.593121
3076	3R_DroMel_CAF1	8,111,596 – 8,111,703	- - - - - - - - -	4994	8,111,596 – 8,111,703	+	3	107	81.29	-1.34	0.79	0.500000
3077	3R_DroMel_CAF1	8,116,007 – 8,116,122	- - - "knownCDS=Parent=FBtr0082562;Name=svp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11502-RC" - - - - -	4995	8,116,007 – 8,116,122	+	6	115	74.51	-0.46	0.84	0.555041
3078	3R_DroMel_CAF1	8,120,252 – 8,120,358	- - - "knownCDS=Parent=FBtr0082563;Name=svp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11502-RA" - - - - -	4996	8,120,252 – 8,120,358	+	6	120	80.20	-1.43	0.67	0.644134
3079	3R_DroMel_CAF1	8,120,712 – 8,120,813	- - - "knownCDS=Parent=FBtr0082563;Name=svp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11502-RA" - - - - -	4997	8,120,712 – 8,120,813	-	6	107	74.97	-2.12	0.51	0.932273
3080	3R_DroMel_CAF1	8,123,323 – 8,123,527	- - - - - - - - -	4998	8,123,323 – 8,123,431	+	5	109	71.26	-3.27	0.65	0.999805
				4999	8,123,323 – 8,123,431	-	5	109	71.26	-1.17	0.66	0.500000
				5000	8,123,431 – 8,123,527	+	6	106	85.90	-1.64	0.82	0.533917
3081	3R_DroMel_CAF1	8,125,666 – 8,125,769	- - - - - - - - -	5001	8,125,666 – 8,125,769	-	6	103	93.98	-1.54	0.85	0.581374
3082	3R_DroMel_CAF1	8,126,714 – 8,126,806	- - - - - - - - -	5002	8,126,714 – 8,126,806	+	6	120	79.38	-1.06	0.78	0.605875
3083	3R_DroMel_CAF1	8,130,412 – 8,130,513	- - - - - - - - -	5003	8,130,412 – 8,130,513	+	5	101	88.04	-1.96	0.79	0.885491
3084	3R_DroMel_CAF1	8,131,905 – 8,132,002	- - - - - - - - -	5004	8,131,905 – 8,132,002	+	6	101	81.62	-2.26	0.57	0.656488
3085	3R_DroMel_CAF1	8,133,789 – 8,133,888	- - - - - - - - -	5005	8,133,789 – 8,133,888	-	6	119	75.85	-1.22	0.69	0.770624
3086	3R_DroMel_CAF1	8,137,982 – 8,138,081	- - - "knownCDS=Parent=FBtr0082566;Name=CG4066-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4066-RA" - - - - -	5006	8,137,982 – 8,138,081	-	6	105	78.35	-1.88	0.52	0.575809
3087	3R_DroMel_CAF1	8,139,131 – 8,139,225	- - - - - - - - -	5007	8,139,131 – 8,139,225	-	5	94	95.10	-1.49	0.89	0.903481
3088	3R_DroMel_CAF1	8,139,375 – 8,139,512	- - - - - - - - -	5008	8,139,375 – 8,139,485	+	5	113	93.13	-2.15	0.85	0.992666
				5009	8,139,375 – 8,139,485	-	5	113	93.13	-1.77	0.88	0.981104
				5010	8,139,411 – 8,139,512	+	6	101	94.32	-3.54	0.86	0.998699
				5011	8,139,411 – 8,139,512	-	6	101	94.32	-2.50	0.84	0.953529
3089	3R_DroMel_CAF1	8,148,251 – 8,148,432	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000214;Name=Dmel_Thr_TGT_14000214;TFAMID=DmelTTGT-8148356" "tRNAscan=type:Thr:anticodon:TGT f:8148284_t:8148388_strand=-_cove=76.08" - - "Rfam=AE003695.2/2735-2806_RF00005;tRNA;\|2e-27" - - - "Flybase=FBgn0050257:CR30257:cytosolic_tRNA_gene\|2e-36"	5012	8,148,251 – 8,148,363	+	6	117	75.66	-2.22	0.84	0.982925
				5013	8,148,251 – 8,148,363	-	6	117	75.66	-2.02	0.86	0.978653
				5014	8,148,283 – 8,148,392	+	6	112	76.91	-2.28	0.82	0.978357
				5015	8,148,283 – 8,148,392	-	6	112	76.91	-2.10	0.87	0.972280
				5016	8,148,323 – 8,148,432	+	6	110	81.10	-3.04	0.44	0.778319
				5017	8,148,323 – 8,148,432	-	6	110	81.10	-4.49	0.54	0.982681
3090	3R_DroMel_CAF1	8,153,418 – 8,153,513	- - - - - - - - -	5018	8,153,418 – 8,153,513	+	6	101	79.49	-2.32	0.58	0.893683
3091	3R_DroMel_CAF1	8,160,487 – 8,160,603	- - - - - - - - -	5019	8,160,487 – 8,160,603	+	6	118	75.47	-1.71	0.55	0.755943
3092	3R_DroMel_CAF1	8,161,977 – 8,162,075	- - - - - - - - -	5020	8,161,977 – 8,162,075	+	6	101	82.94	-2.37	0.62	0.626167
3093	3R_DroMel_CAF1	8,168,572 – 8,168,674	- - - - - - - - -	5021	8,168,572 – 8,168,674	-	6	104	76.66	-2.21	0.40	0.628704
3094	3R_DroMel_CAF1	8,169,185 – 8,169,278	- - - - - - - - -	5022	8,169,185 – 8,169,278	-	6	98	77.91	-1.44	0.66	0.744487
3095	3R_DroMel_CAF1	8,172,638 – 8,172,784	- - - - - - - - -	5023	8,172,638 – 8,172,753	+	6	120	87.31	-1.45	0.88	0.589610
3095	3R_DroMel_CAF1	8,172,638 – 8,172,784	- - - - - - - - -	5024	8,172,678 – 8,172,784	-	6	115	80.34	-1.76	0.59	0.614994
3096	3R_DroMel_CAF1	8,175,128 – 8,175,224	- - - "knownCDS=Parent=FBtr0082614, FBtr0082615;Name=CG10038-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10038-RB, FlyBase+Annotation+IDs:CG10038-RA" - - - - -	5025	8,175,128 – 8,175,224	-	6	106	83.89	-2.12	0.79	0.770271
3097	3R_DroMel_CAF1	8,185,196 – 8,185,304	- - - - - - - - -	5026	8,185,196 – 8,185,304	+	3	115	70.72	-1.34	0.64	0.756037
3097	3R_DroMel_CAF1	8,185,196 – 8,185,304	- - - - - - - - -	5027	8,185,196 – 8,185,304	-	3	115	70.72	-2.00	0.54	0.948157
3098	3R_DroMel_CAF1	8,189,883 – 8,190,163	- - - "knownCDS=Parent=FBtr0082610;Name=Tim17a1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10090-RA" - - - - -	5028	8,189,883 – 8,190,003	-	5	120	93.83	-1.62	0.89	0.965134
				5029	8,189,923 – 8,190,043	+	5	120	95.75	-1.49	0.86	0.786068
				5030	8,189,923 – 8,190,043	-	5	120	95.75	-1.47	0.87	0.836172
				5031	8,190,043 – 8,190,163	+	5	120	93.58	-1.32	0.84	0.583828
3099	3R_DroMel_CAF1	8,191,138 – 8,191,253	- - - "knownCDS=Parent=FBtr0082609;Name=GstD10-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18548-RA" - - - - -	5032	8,191,138 – 8,191,253	-	4	120	94.18	-1.73	0.98	0.911826
3100	3R_DroMel_CAF1	8,191,958 – 8,192,078	- - - "knownCDS=Parent=FBtr0082608;Name=GstD9-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10091-RA" - - - - -	5033	8,191,958 – 8,192,078	-	4	120	97.78	-1.83	0.95	0.747824
3101	3R_DroMel_CAF1	8,192,358 – 8,192,478	- - - "knownCDS=Parent=FBtr0082608;Name=GstD9-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10091-RA" - - - - -	5034	8,192,358 – 8,192,478	+	4	120	93.89	-1.74	0.85	0.722162
3102	3R_DroMel_CAF1	8,193,321 – 8,193,422	- - - - - - - - -	5035	8,193,321 – 8,193,422	-	3	120	72.46	-1.26	0.68	0.699726
3103	3R_DroMel_CAF1	8,194,007 – 8,194,127	- - - "knownCDS=Parent=FBtr0100410;Name=GstD1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10045-RB" - - - - -	5036	8,194,007 – 8,194,127	+	4	120	97.22	-2.01	0.91	0.792404
3104	3R_DroMel_CAF1	8,194,998 – 8,195,112	- - - - - - - - -	5037	8,194,998 – 8,195,112	-	3	115	76.45	-1.64	0.69	0.859866
3105	3R_DroMel_CAF1	8,195,152 – 8,195,270	- - - - - - - - -	5038	8,195,152 – 8,195,270	-	4	120	91.71	-2.10	0.78	0.792727
3106	3R_DroMel_CAF1	8,195,304 – 8,195,417	- - - - - - - - -	5039	8,195,304 – 8,195,417	+	3	118	83.67	-1.62	0.83	0.671987
3107	3R_DroMel_CAF1	8,195,506 – 8,195,690	- - - - - - - - -	5040	8,195,506 – 8,195,621	-	4	120	84.07	-1.74	0.66	0.629159
				5041	8,195,584 – 8,195,690	+	3	120	78.36	-1.83	0.65	0.815535
				5042	8,195,584 – 8,195,690	-	3	120	78.36	-1.71	0.60	0.500000
3108	3R_DroMel_CAF1	8,198,183 – 8,198,303	- - - "knownCDS=Parent=FBtr0082569;Name=GstD2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4181-RA" - - - - -	5043	8,198,183 – 8,198,303	-	4	120	94.17	-1.69	0.92	0.816234
3109	3R_DroMel_CAF1	8,198,898 – 8,199,058	- - - "knownCDS=Parent=FBtr0082570;Name=GstD3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4381-RA" - - - - -	5044	8,198,898 – 8,199,018	+	4	120	92.64	-1.81	0.90	0.892402
				5045	8,198,898 – 8,199,018	-	4	120	92.64	-1.67	0.81	0.634602
				5046	8,198,938 – 8,199,058	+	4	120	93.06	-1.52	0.84	0.559796
3110	3R_DroMel_CAF1	8,199,178 – 8,199,298	- - - "knownCDS=Parent=FBtr0082570;Name=GstD3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4381-RA" - - - - -	5047	8,199,178 – 8,199,298	-	4	120	92.22	-1.49	0.81	0.516666
3111	3R_DroMel_CAF1	8,201,881 – 8,202,001	- - - "knownCDS=Parent=FBtr0082572;Name=GstD5-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12242-RA" - - - - -	5048	8,201,881 – 8,202,001	-	4	120	94.17	-1.67	0.83	0.565996
3112	3R_DroMel_CAF1	8,204,272 – 8,204,432	- - - "knownCDS=Parent=FBtr0082574;Name=GstD7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4371-RA" - - - - -	5049	8,204,272 – 8,204,392	-	4	120	93.33	-1.48	0.86	0.567281
3112	3R_DroMel_CAF1	8,204,272 – 8,204,432		5050	8,204,312 – 8,204,432	+	4	120	94.86	-1.45	0.91	0.565812
3113	3R_DroMel_CAF1	8,204,552 – 8,204,672	- - - "knownCDS=Parent=FBtr0082574;Name=GstD7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4371-RA" - - - - -	5051	8,204,552 – 8,204,672	-	4	120	89.86	-1.48	0.82	0.607008
3114	3R_DroMel_CAF1	8,204,792 – 8,204,912	- - - "knownCDS=Parent=FBtr0082574;Name=GstD7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4371-RA" - - - - -	5052	8,204,792 – 8,204,912	-	4	120	88.61	-2.24	0.65	0.621193
3115	3R_DroMel_CAF1	8,205,393 – 8,205,508	- - - - - - - - -	5053	8,205,393 – 8,205,508	-	4	120	82.84	-2.21	0.66	0.887739
3116	3R_DroMel_CAF1	8,205,778 – 8,205,898	- - - "knownCDS=Parent=FBtr0082575;Name=GstD8-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4421-RA" - - - - -	5054	8,205,778 – 8,205,898	-	4	120	94.44	-1.57	0.87	0.606511
3117	3R_DroMel_CAF1	8,206,098 – 8,206,298	- - - "knownCDS=Parent=FBtr0082575;Name=GstD8-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4421-RA" - - - - -	5055	8,206,098 – 8,206,218	-	4	120	92.92	-2.44	0.84	0.942422
				5056	8,206,138 – 8,206,258	-	4	120	94.44	-2.03	0.81	0.718370
				5057	8,206,178 – 8,206,298	-	4	120	94.44	-2.23	0.88	0.931746
3118	3R_DroMel_CAF1	8,206,482 – 8,206,574	- - - - - - - - -	5058	8,206,482 – 8,206,574	+	3	118	74.70	-2.52	0.61	0.997820
3119	3R_DroMel_CAF1	8,211,178 – 8,211,288	- - - "knownCDS=Parent=FBtr0082576;Name=CG17639-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17639-RA" - - - - -	5059	8,211,178 – 8,211,288	+	6	111	78.69	-1.54	0.62	0.657447
3120	3R_DroMel_CAF1	8,214,793 – 8,214,907	- - - "knownCDS=Parent=FBtr0082581;Name=CG31218-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31218-RA" - - - - -	5060	8,214,793 – 8,214,907	+	6	120	80.02	-2.03	0.61	0.805986
3121	3R_DroMel_CAF1	8,215,335 – 8,215,455	- - - "knownCDS=Parent=FBtr0082581;Name=CG31218-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31218-RA" - - - - -	5061	8,215,335 – 8,215,455	+	6	120	83.22	-2.24	0.68	0.669159
3122	3R_DroMel_CAF1	8,217,315 – 8,217,414	- - - "knownCDS=Parent=FBtr0082604;Name=CG10096-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10096-RB" - - - - -	5062	8,217,315 – 8,217,414	-	6	99	77.99	-1.85	0.51	0.531498
3123	3R_DroMel_CAF1	8,221,386 – 8,221,496	- - - - - - - - -	5063	8,221,386 – 8,221,496	+	3	111	94.58	-1.91	0.91	0.700127
3124	3R_DroMel_CAF1	8,222,897 – 8,223,003	- - - - - - - - -	5064	8,222,897 – 8,223,003	-	6	111	81.07	-1.61	0.85	0.806886
3125	3R_DroMel_CAF1	8,233,923 – 8,234,013	- - - - - - - - -	5065	8,233,923 – 8,234,013	-	5	96	70.25	-1.67	0.53	0.721576
3126	3R_DroMel_CAF1	8,235,081 – 8,235,189	- - - "knownCDS=Parent=FBtr0082585;Name=CG5196-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5196-RB" - - - - -	5066	8,235,081 – 8,235,189	+	6	116	75.86	-1.54	0.58	0.660369
3127	3R_DroMel_CAF1	8,240,030 – 8,240,135	- - - - - - - - -	5067	8,240,030 – 8,240,135	+	6	109	78.67	-2.09	0.74	0.949455
3127	3R_DroMel_CAF1	8,240,030 – 8,240,135	- - - - - - - - -	5068	8,240,030 – 8,240,135	-	6	109	78.67	-2.54	0.78	0.970939
3128	3R_DroMel_CAF1	8,240,443 – 8,240,558	- - - - - - - - -	5069	8,240,443 – 8,240,558	+	5	115	93.04	-1.26	0.84	0.519694
3129	3R_DroMel_CAF1	8,242,636 – 8,242,735	- - - "knownCDS=Parent=FBtr0082586;Name=CG6525-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6525-RA" - - - - -	5070	8,242,636 – 8,242,735	-	6	102	81.53	-2.02	0.62	0.699195
3130	3R_DroMel_CAF1	8,243,284 – 8,243,382	- - - "knownCDS=Parent=FBtr0082586;Name=CG6525-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6525-RA" - - - - -	5071	8,243,284 – 8,243,382	-	6	98	79.66	-1.88	0.80	0.914228
3131	3R_DroMel_CAF1	8,243,834 – 8,243,940	- - - "knownCDS=Parent=FBtr0082586;Name=CG6525-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6525-RA" - - - - -	5072	8,243,834 – 8,243,940	+	4	106	88.94	-2.21	0.71	0.795407
3131	3R_DroMel_CAF1	8,243,834 – 8,243,940		5073	8,243,834 – 8,243,940	-	4	106	88.94	-1.44	0.75	0.527684
3132	3R_DroMel_CAF1	8,251,476 – 8,251,581	- - - - - - - - -	5074	8,251,476 – 8,251,581	-	6	113	81.89	-2.20	0.56	0.579601
3133	3R_DroMel_CAF1	8,256,583 – 8,256,703	- - "RNAmicro=f:8256583_t:8256702_strand:-_p:0.821990" "knownCDS=Parent=FBtr0082589;Name=CG5245-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5245-RA" - - - - -	5075	8,256,583 – 8,256,703	+	5	120	83.42	-1.80	0.67	0.641007
3133	3R_DroMel_CAF1	8,256,583 – 8,256,703		5076	8,256,583 – 8,256,703	-	5	120	83.42	-2.94	0.73	0.990949
3134	3R_DroMel_CAF1	8,264,631 – 8,264,741	- - - "knownCDS=Parent=FBtr0082682;Name=CG17207-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17207-RA" - - - - -	5077	8,264,631 – 8,264,741	+	6	120	76.94	-2.58	0.47	0.956298
3134	3R_DroMel_CAF1	8,264,631 – 8,264,741		5078	8,264,631 – 8,264,741	-	6	120	76.94	-2.88	0.54	0.990297
3135	3R_DroMel_CAF1	8,269,527 – 8,269,715	- - - - - - - - -	5079	8,269,527 – 8,269,624	+	6	104	82.48	-1.95	0.61	0.523983
				5080	8,269,527 – 8,269,624	-	6	104	82.48	-2.36	0.63	0.703307
				5081	8,269,559 – 8,269,657	+	3	98	97.28	-2.02	1.00	0.926908
				5082	8,269,588 – 8,269,693	-	3	105	93.02	-2.01	0.84	0.559737
				5083	8,269,624 – 8,269,715	-	3	91	91.21	-4.01	0.82	0.939726
3136	3R_DroMel_CAF1	8,276,104 – 8,276,220	- - - - - - - - -	5084	8,276,104 – 8,276,220	-	3	120	75.93	-1.68	0.59	0.564336
3137	3R_DroMel_CAF1	8,279,059 – 8,279,153	- - - - - - - - -	5085	8,279,059 – 8,279,153	+	5	108	77.44	-1.99	0.58	0.866549
3138	3R_DroMel_CAF1	8,282,661 – 8,282,769	- - - "knownCDS=Parent=FBtr0082634;Name=CG5333-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5333-RA" - - - - -	5086	8,282,661 – 8,282,769	-	6	108	82.14	-2.11	0.62	0.652354
3139	3R_DroMel_CAF1	8,287,184 – 8,287,297	- - - "knownCDS=Parent=FBtr0082635;Name=CG12267-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12267-RA" - - - - -	5087	8,287,184 – 8,287,297	-	6	119	82.70	-1.48	0.78	0.596759
3140	3R_DroMel_CAF1	8,291,351 – 8,291,451	- - - "knownCDS=Parent=FBtr0082679;Name=Hsp70Ba-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31449-RA" - - - - -	5088	8,291,351 – 8,291,451	+	6	120	81.75	-2.17	0.62	0.724327
3141	3R_DroMel_CAF1	8,292,850 – 8,292,970	- - - "knownCDS=Parent=FBtr0082679;Name=Hsp70Ba-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31449-RA" - - - - -	5089	8,292,850 – 8,292,970	-	6	120	91.50	-1.68	0.87	0.786672
3142	3R_DroMel_CAF1	8,293,381 – 8,293,574	- - - - - - - - -	5090	8,293,381 – 8,293,496	-	4	120	80.99	-2.91	0.64	0.991556
				5091	8,293,420 – 8,293,536	-	6	120	78.72	-2.60	0.60	0.965942
				5092	8,293,456 – 8,293,574	-	6	120	81.85	-2.69	0.52	0.684028
3143	3R_DroMel_CAF1	8,328,088 – 8,328,322	- - - - - - - - -	5093	8,328,088 – 8,328,206	-	5	120	74.81	-1.93	0.48	0.816398
3143	3R_DroMel_CAF1	8,328,088 – 8,328,322	- - - - - - - - -	5094	8,328,206 – 8,328,322	+	5	120	70.44	-2.43	0.49	0.995942
3144	3R_DroMel_CAF1	8,329,026 – 8,329,146	- - - "knownCDS=Parent=FBtr0082636;Name=Hsp70Bbb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5834-RA" - - - "ncRNAdb=MmuscAK078618_unclassifiable\|2e-12" -	5095	8,329,026 – 8,329,146	+	3	120	96.11	-1.67	0.97	0.715845
3145	3R_DroMel_CAF1	8,331,514 – 8,331,623	- - - - - - - - -	5096	8,331,514 – 8,331,623	+	3	110	90.27	-2.59	0.83	0.866870
3146	3R_DroMel_CAF1	8,337,775 – 8,337,870	- - - - - - - - -	5097	8,337,775 – 8,337,870	+	4	120	78.72	-2.68	0.67	0.996031
3147	3R_DroMel_CAF1	8,345,304 – 8,345,417	- - - - - - - - -	5098	8,345,304 – 8,345,417	-	5	113	97.79	-1.42	0.97	0.921818
3148	3R_DroMel_CAF1	8,346,445 – 8,346,595	- - - - - - - - -	5099	8,346,445 – 8,346,540	+	5	120	75.42	-2.54	0.51	0.994556
				5100	8,346,500 – 8,346,595	+	5	101	81.76	-3.01	0.54	0.976057
				5101	8,346,500 – 8,346,595	-	5	101	81.76	-3.08	0.52	0.976810
3149	3R_DroMel_CAF1	8,348,736 – 8,348,826	- - - - - - - - -	5102	8,348,736 – 8,348,826	-	6	105	82.66	-2.76	0.57	0.701749
3150	3R_DroMel_CAF1	8,350,188 – 8,350,291	- - - - - - - - -	5103	8,350,188 – 8,350,291	-	5	118	77.05	-1.81	0.36	0.508621
3151	3R_DroMel_CAF1	8,351,392 – 8,351,530	- - - - - - - - -	5104	8,351,392 – 8,351,490	+	3	120	74.08	-1.58	0.62	0.735929
3151	3R_DroMel_CAF1	8,351,392 – 8,351,530	- - - - - - - - -	5105	8,351,427 – 8,351,530	+	4	120	73.06	-1.71	0.73	0.954283
3152	3R_DroMel_CAF1	8,351,922 – 8,352,015	- - - - - - - - -	5106	8,351,922 – 8,352,015	+	5	93	95.48	-1.54	0.86	0.846794
3153	3R_DroMel_CAF1	8,355,087 – 8,355,185	- - - - - - - - -	5107	8,355,087 – 8,355,185	+	6	108	80.50	-2.27	0.58	0.812462
3154	3R_DroMel_CAF1	8,356,697 – 8,356,816	- - - - - - - - -	5108	8,356,697 – 8,356,788	-	6	91	81.15	-2.07	0.58	0.662855
3154	3R_DroMel_CAF1	8,356,697 – 8,356,816	- - - - - - - - -	5109	8,356,721 – 8,356,816	-	6	95	79.99	-2.51	0.54	0.878123
3155	3R_DroMel_CAF1	8,360,740 – 8,360,839	- - - - - - - - -	5110	8,360,740 – 8,360,839	+	6	106	93.42	-2.72	0.78	0.642544
3155	3R_DroMel_CAF1	8,360,740 – 8,360,839	- - - - - - - - -	5111	8,360,740 – 8,360,839	-	6	106	93.42	-3.50	0.84	0.994807
3156	3R_DroMel_CAF1	8,361,575 – 8,361,695	- - - - - - - - -	5112	8,361,575 – 8,361,695	+	6	120	84.94	-1.70	0.78	0.522234
3157	3R_DroMel_CAF1	8,364,062 – 8,364,157	- - - - - - - - -	5113	8,364,062 – 8,364,157	-	6	107	81.12	-1.78	0.68	0.747575
3158	3R_DroMel_CAF1	8,365,254 – 8,365,390	- - - - - - - - -	5114	8,365,254 – 8,365,364	+	4	110	84.24	-1.57	0.80	0.645266
				5115	8,365,254 – 8,365,364	-	4	110	84.24	-1.65	0.71	0.642718
				5116	8,365,294 – 8,365,390	+	5	101	74.10	-2.11	0.54	0.962049
3159	3R_DroMel_CAF1	8,366,874 – 8,366,969	- - - - - - - - -	5117	8,366,874 – 8,366,969	-	6	100	77.68	-1.63	0.75	0.922403
3160	3R_DroMel_CAF1	8,370,855 – 8,371,014	- - - - - - - - -	5118	8,370,855 – 8,370,945	+	5	99	77.33	-3.03	0.33	0.997930
				5119	8,370,855 – 8,370,945	-	5	99	77.33	-3.02	0.33	0.997821
				5120	8,370,868 – 8,370,978	+	5	110	86.90	-3.54	0.50	0.507814
				5121	8,370,868 – 8,370,978	-	5	110	86.90	-3.42	0.64	0.932482
				5122	8,370,905 – 8,371,014	-	4	109	89.71	-2.16	0.80	0.905198
3161	3R_DroMel_CAF1	8,371,677 – 8,371,776	- - - - - - - - -	5123	8,371,677 – 8,371,776	-	5	102	95.40	-1.41	0.87	0.777943
3162	3R_DroMel_CAF1	8,375,379 – 8,375,473	- - - - - - - - -	5124	8,375,379 – 8,375,473	-	5	102	82.93	-2.00	0.58	0.577291
3163	3R_DroMel_CAF1	8,377,238 – 8,377,353	"known=miRNA ID=Dmel\CG_RFAM_MIR_48002332;Parent=Dmel\CG_RFAM_MIR_48002331;Name=dme-miR-284" - - - - - "miRBase=dme-mir-284\|9e-52" - "Flybase=FBgn0067707:mir-284:microRNA_encoding_gene\|5e-11"	5125	8,377,238 – 8,377,353	+	6	120	84.04	-2.90	0.88	0.975834
3163	3R_DroMel_CAF1	8,377,238 – 8,377,353		5126	8,377,238 – 8,377,353	-	6	120	84.04	-3.82	0.90	0.992175
3164	3R_DroMel_CAF1	8,383,915 – 8,384,006	- - - - - - - - -	5127	8,383,915 – 8,384,006	-	6	101	75.95	-2.59	0.41	0.945297
3165	3R_DroMel_CAF1	8,392,675 – 8,392,801	- - - - - - - - -	5128	8,392,675 – 8,392,773	-	6	110	78.77	-2.85	0.73	0.976981
				5129	8,392,697 – 8,392,801	+	6	106	79.49	-2.24	0.55	0.829817
				5130	8,392,697 – 8,392,801	-	6	106	79.49	-2.46	0.65	0.945059
3166	3R_DroMel_CAF1	8,392,880 – 8,392,972	- - - - - - - - -	5131	8,392,880 – 8,392,972	+	6	102	80.77	-1.64	0.60	0.535366
3167	3R_DroMel_CAF1	8,393,567 – 8,393,698	- - - - - - - - -	5132	8,393,567 – 8,393,676	-	4	109	85.10	-1.94	0.70	0.786046
				5133	8,393,598 – 8,393,698	+	6	100	72.80	-2.60	0.56	0.995659
				5134	8,393,598 – 8,393,698	-	6	100	72.80	-2.03	0.42	0.840456
3168	3R_DroMel_CAF1	8,394,685 – 8,394,775	- - - - - - - - -	5135	8,394,685 – 8,394,775	+	6	100	80.89	-1.44	0.71	0.659514
3168	3R_DroMel_CAF1	8,394,685 – 8,394,775	- - - - - - - - -	5136	8,394,685 – 8,394,775	-	6	100	80.89	-2.35	0.73	0.912035
3169	3R_DroMel_CAF1	8,400,702 – 8,400,803	- - - - - - - - -	5137	8,400,702 – 8,400,803	+	6	117	75.99	-2.33	0.59	0.978488
3169	3R_DroMel_CAF1	8,400,702 – 8,400,803	- - - - - - - - -	5138	8,400,702 – 8,400,803	-	6	117	75.99	-2.60	0.51	0.984373
3170	3R_DroMel_CAF1	8,400,962 – 8,401,065	- - - - - - - - -	5139	8,400,962 – 8,401,065	+	3	103	95.47	-1.42	0.97	0.551228
3171	3R_DroMel_CAF1	8,403,569 – 8,403,663	- - - - - - - - -	5140	8,403,569 – 8,403,663	-	6	107	82.13	-1.36	0.70	0.520110
3172	3R_DroMel_CAF1	8,407,766 – 8,407,868	- - - - - - - - -	5141	8,407,766 – 8,407,868	-	5	107	78.29	-1.82	0.63	0.779992
3173	3R_DroMel_CAF1	8,419,636 – 8,419,739	- - - - - - - - -	5142	8,419,636 – 8,419,739	-	6	114	82.38	-3.18	0.66	0.899459
3174	3R_DroMel_CAF1	8,421,854 – 8,421,956	- - - - - - - - -	5143	8,421,854 – 8,421,956	-	5	111	86.46	-1.93	0.65	0.508684
3175	3R_DroMel_CAF1	8,424,545 – 8,424,642	- - - - - - - - -	5144	8,424,545 – 8,424,642	+	6	97	89.28	-3.27	0.88	0.997110
3176	3R_DroMel_CAF1	8,425,671 – 8,425,765	- - - - - - - - -	5145	8,425,671 – 8,425,765	+	5	103	85.54	-1.91	0.76	0.812292
3176	3R_DroMel_CAF1	8,425,671 – 8,425,765	- - - - - - - - -	5146	8,425,671 – 8,425,765	-	5	103	85.54	-1.81	0.65	0.508500
3177	3R_DroMel_CAF1	8,441,680 – 8,441,777	- - - - - - - - -	5147	8,441,680 – 8,441,777	+	6	99	80.89	-1.93	0.56	0.539212
3178	3R_DroMel_CAF1	8,443,214 – 8,443,317	- - - - - - - - -	5148	8,443,214 – 8,443,317	+	3	105	94.92	-2.39	0.92	0.921751
3179	3R_DroMel_CAF1	8,447,017 – 8,447,139	- - - - - - - - -	5149	8,447,017 – 8,447,107	+	6	90	81.93	-1.25	0.72	0.500000
3179	3R_DroMel_CAF1	8,447,017 – 8,447,139	- - - - - - - - -	5150	8,447,046 – 8,447,139	+	4	93	91.94	-1.93	0.79	0.758007
3180	3R_DroMel_CAF1	8,448,531 – 8,448,636	- - - - - - - - -	5151	8,448,531 – 8,448,636	-	6	120	79.84	-2.13	0.51	0.617689
3181	3R_DroMel_CAF1	8,450,491 – 8,450,585	- - - "knownCDS=Parent=FBtr0082670, FBtr0082671;Name=Vha55-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17369-RB, FlyBase+Annotation+IDs:CG17369-RA" - - - - -	5152	8,450,491 – 8,450,585	+	6	120	82.09	-2.02	0.91	0.935765
3181	3R_DroMel_CAF1	8,450,491 – 8,450,585		5153	8,450,491 – 8,450,585	-	6	120	82.09	-1.70	0.93	0.875882
3182	3R_DroMel_CAF1	8,454,934 – 8,455,033	- - - "knownCDS=Parent=FBtr0082641, FBtr0082642;Name=CG6359-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6359-RA, FlyBase+Annotation+IDs:CG6359-RB" - - - - -	5154	8,454,934 – 8,455,033	-	6	110	82.35	-2.12	0.77	0.836727
3183	3R_DroMel_CAF1	8,457,030 – 8,457,185	- - - "knownCDS=Parent=FBtr0082643;Name=CG18616-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18616-RA" - - - - -	5155	8,457,030 – 8,457,145	+	6	120	81.60	-1.90	0.64	0.679092
				5156	8,457,030 – 8,457,145	-	6	120	81.60	-2.25	0.61	0.757644
				5157	8,457,070 – 8,457,185	+	6	120	76.57	-1.85	0.54	0.780016
				5158	8,457,070 – 8,457,185	-	6	120	76.57	-1.88	0.50	0.653451
3184	3R_DroMel_CAF1	8,457,374 – 8,457,494	- - - - - - - - -	5159	8,457,374 – 8,457,494	-	6	120	82.43	-1.70	0.68	0.598666
3185	3R_DroMel_CAF1	8,459,028 – 8,459,148	- - - "knownCDS=Parent=FBtr0082644;Name=CG18530-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18530-RA" - - - - -	5160	8,459,028 – 8,459,148	-	5	120	92.17	-1.62	0.96	0.989130
3186	3R_DroMel_CAF1	8,459,546 – 8,459,666	- - - "knownCDS=Parent=FBtr0082644;Name=CG18530-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18530-RA" - - - - -	5161	8,459,546 – 8,459,666	+	5	120	91.08	-1.54	0.87	0.885397
3187	3R_DroMel_CAF1	8,459,943 – 8,460,143	- - - "knownCDS=Parent=FBtr0082644;Name=CG18530-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18530-RA" - - - - -	5162	8,459,943 – 8,460,063	+	5	120	91.08	-1.85	0.90	0.988772
				5163	8,459,943 – 8,460,063	-	5	120	91.08	-1.55	0.89	0.932462
				5164	8,460,023 – 8,460,143	+	5	120	91.00	-1.46	0.79	0.593327
3188	3R_DroMel_CAF1	8,460,263 – 8,460,423	- - - - - - - - -	5165	8,460,263 – 8,460,383	+	3	120	97.77	-2.85	0.99	0.986990
				5166	8,460,263 – 8,460,383	-	3	120	97.77	-1.73	1.02	0.858101
				5167	8,460,303 – 8,460,423	-	3	120	96.10	-1.59	0.97	0.655397
3189	3R_DroMel_CAF1	8,461,139 – 8,461,255	- - - "knownCDS=Parent=FBtr0082645;Name=CG11598-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11598-RA" - - - - -	5168	8,461,139 – 8,461,255	+	3	116	98.85	-1.56	1.00	0.703069
3189	3R_DroMel_CAF1	8,461,139 – 8,461,255		5169	8,461,139 – 8,461,255	-	3	116	98.85	-2.17	1.00	0.941549
3190	3R_DroMel_CAF1	8,462,479 – 8,462,679	- - - "knownCDS=Parent=FBtr0082646;Name=CG11600-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11600-RA" - - - - -	5170	8,462,479 – 8,462,599	+	5	120	93.75	-1.79	0.88	0.980574
				5171	8,462,519 – 8,462,639	+	5	120	91.08	-2.25	0.86	0.996092
				5172	8,462,559 – 8,462,679	+	5	120	88.92	-1.64	0.83	0.824485
3191	3R_DroMel_CAF1	8,466,820 – 8,466,980	- - - "knownCDS=Parent=FBtr0082669;Name=CG6753-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6753-RA" - - - - -	5173	8,466,820 – 8,466,940	-	6	120	83.44	-2.97	0.68	0.812146
3191	3R_DroMel_CAF1	8,466,820 – 8,466,980		5174	8,466,860 – 8,466,980	-	6	120	80.50	-1.32	0.71	0.619478
3192	3R_DroMel_CAF1	8,476,048 – 8,476,140	- - - - - - - - -	5175	8,476,048 – 8,476,140	-	5	92	96.85	-1.67	0.99	0.992990
3193	3R_DroMel_CAF1	8,481,312 – 8,481,417	- - - - - - - - -	5176	8,481,312 – 8,481,417	-	6	109	79.23	-1.56	0.64	0.690644
3194	3R_DroMel_CAF1	8,481,962 – 8,482,061	- - - - - - - - -	5177	8,481,962 – 8,482,061	+	6	104	83.64	-2.86	0.67	0.747521
3195	3R_DroMel_CAF1	8,483,846 – 8,483,943	- - - "knownCDS=Parent=FBtr0082649;Name=CG6225-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6225-RA" - - - - -	5178	8,483,846 – 8,483,943	+	6	105	83.68	-1.60	0.77	0.563490
3196	3R_DroMel_CAF1	8,487,259 – 8,487,351	- - - - - - - - -	5179	8,487,259 – 8,487,351	+	6	94	84.10	-1.82	0.76	0.597471
3197	3R_DroMel_CAF1	8,488,346 – 8,488,439	- - - - - - - - -	5180	8,488,346 – 8,488,439	+	6	94	81.79	-2.49	0.59	0.773058
3198	3R_DroMel_CAF1	8,492,879 – 8,492,976	- - - - - - - - -	5181	8,492,879 – 8,492,976	+	5	97	98.14	-1.30	0.96	0.781231
3199	3R_DroMel_CAF1	8,493,557 – 8,493,655	- - - - - - - - -	5182	8,493,557 – 8,493,655	-	5	102	89.44	-1.26	0.88	0.538021
3200	3R_DroMel_CAF1	8,494,287 – 8,494,382	- - - - - - - - -	5183	8,494,287 – 8,494,382	-	3	95	95.44	-1.61	0.93	0.545588
3201	3R_DroMel_CAF1	8,494,641 – 8,494,743	- - - "knownCDS=Parent=FBtr0082650;Name=CG14395-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14395-RA" - - - - -	5184	8,494,641 – 8,494,743	+	6	120	81.82	-1.41	0.85	0.660224
3202	3R_DroMel_CAF1	8,495,901 – 8,496,061	- - - "knownCDS=Parent=FBtr0082650;Name=CG14395-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14395-RA" - - - - -	5185	8,495,901 – 8,496,021	+	6	120	75.68	-0.89	0.71	0.549841
				5186	8,495,941 – 8,496,061	+	6	120	75.17	-1.79	0.61	0.920641
				5187	8,495,941 – 8,496,061	-	6	120	75.17	-1.95	0.61	0.954491
3203	3R_DroMel_CAF1	8,498,342 – 8,498,453	- - - "knownCDS=Parent=FBtr0082650;Name=CG14395-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14395-RA" - - - - -	5188	8,498,342 – 8,498,453	+	6	120	76.27	-1.20	0.69	0.743696
3204	3R_DroMel_CAF1	8,512,232 – 8,512,322	- - - - - - - - -	5189	8,512,232 – 8,512,322	-	6	93	75.61	-1.78	0.57	0.850236
3205	3R_DroMel_CAF1	8,526,762 – 8,526,881	- - - - - - - - -	5190	8,526,762 – 8,526,881	-	5	120	84.20	-1.87	0.63	0.551689
3206	3R_DroMel_CAF1	8,531,395 – 8,531,509	- - "RNAmicro=f:8531395_t:8531508_strand:+_p:0.616050" "knownCDS=Parent=FBtr0082662;Name=mus308-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6019-RA" - - - - -	5191	8,531,395 – 8,531,509	+	6	114	82.92	-3.17	0.72	0.898247
3206	3R_DroMel_CAF1	8,531,395 – 8,531,509		5192	8,531,395 – 8,531,509	-	6	114	82.92	-2.46	0.73	0.816585
3207	3R_DroMel_CAF1	8,532,107 – 8,532,227	- - - "knownCDS=Parent=FBtr0082662;Name=mus308-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6019-RA" - - - - -	5193	8,532,107 – 8,532,227	+	6	120	75.17	-2.34	0.36	0.785533
3207	3R_DroMel_CAF1	8,532,107 – 8,532,227		5194	8,532,107 – 8,532,227	-	6	120	75.17	-2.02	0.48	0.836377
3208	3R_DroMel_CAF1	8,537,866 – 8,537,959	- - - - - - - - -	5195	8,537,866 – 8,537,959	+	6	94	70.20	-0.99	0.64	0.514669
3209	3R_DroMel_CAF1	8,540,329 – 8,540,449	- - - "knownCDS=Parent=FBtr0082660;Name=Men-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10120-RB" - - - - -	5196	8,540,329 – 8,540,449	-	6	120	82.61	-1.43	0.70	0.500000
3210	3R_DroMel_CAF1	8,545,523 – 8,545,624	- - - "knownCDS=Parent=FBtr0082660;Name=Men-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10120-RB" - - - - -	5197	8,545,523 – 8,545,624	-	6	114	81.72	-3.02	0.66	0.917385
3211	3R_DroMel_CAF1	8,558,860 – 8,558,975	- - - - - - - - -	5198	8,558,860 – 8,558,975	+	5	116	73.80	-1.78	0.42	0.617421
3212	3R_DroMel_CAF1	8,562,439 – 8,562,545	- - - - - - - - -	5199	8,562,439 – 8,562,545	+	5	120	72.89	-1.90	0.54	0.896044
3212	3R_DroMel_CAF1	8,562,439 – 8,562,545	- - - - - - - - -	5200	8,562,439 – 8,562,545	-	5	120	72.89	-1.79	0.33	0.712562
3213	3R_DroMel_CAF1	8,570,554 – 8,570,648	- - - - - - - - -	5201	8,570,554 – 8,570,648	-	3	114	57.01	-1.50	0.51	0.920786
3214	3R_DroMel_CAF1	8,574,138 – 8,574,233	- - - - - - - - -	5202	8,574,138 – 8,574,233	+	5	95	97.64	-1.64	0.86	0.819442
3214	3R_DroMel_CAF1	8,574,138 – 8,574,233	- - - - - - - - -	5203	8,574,138 – 8,574,233	-	5	95	97.64	-1.34	0.87	0.512340
3215	3R_DroMel_CAF1	8,578,247 – 8,578,365	- - - "knownCDS=Parent=FBtr0082658;Name=beat-Vc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14390-RA" - - - - -	5204	8,578,247 – 8,578,365	+	6	120	87.36	-1.70	0.82	0.514327
3216	3R_DroMel_CAF1	8,580,060 – 8,580,160	- - - - - - - - -	5205	8,580,060 – 8,580,160	-	6	109	80.63	-2.46	0.63	0.894874
3217	3R_DroMel_CAF1	8,580,806 – 8,580,899	- - - - - - - - -	5206	8,580,806 – 8,580,899	-	3	93	73.28	-1.66	0.62	0.876869
3218	3R_DroMel_CAF1	8,582,533 – 8,582,626	- - - - - - - - -	5207	8,582,533 – 8,582,626	-	6	101	79.12	-1.27	0.65	0.533588
3219	3R_DroMel_CAF1	8,584,640 – 8,584,733	- - - - - - - - -	5208	8,584,640 – 8,584,733	-	6	97	90.81	-4.86	0.64	0.871999
3220	3R_DroMel_CAF1	8,584,830 – 8,584,922	- - - - - - - - -	5209	8,584,830 – 8,584,922	+	6	101	80.90	-1.70	0.63	0.621896
3221	3R_DroMel_CAF1	8,585,405 – 8,585,505	- - - - - - - - -	5210	8,585,405 – 8,585,505	+	6	109	89.77	-1.70	0.86	0.745643
3222	3R_DroMel_CAF1	8,586,567 – 8,586,661	- - - - - - - - -	5211	8,586,567 – 8,586,661	+	5	95	88.50	-3.20	0.88	0.999795
3223	3R_DroMel_CAF1	8,587,272 – 8,587,448	- - - - - - - - -	5212	8,587,272 – 8,587,390	+	6	120	96.57	-1.24	0.95	0.938439
				5213	8,587,310 – 8,587,425	+	6	120	94.85	-2.14	0.90	0.992772
				5214	8,587,350 – 8,587,448	+	6	110	78.93	-0.88	0.80	0.508271
3224	3R_DroMel_CAF1	8,588,265 – 8,588,364	- - - - - - - - -	5215	8,588,265 – 8,588,364	+	6	117	84.33	-2.07	0.88	0.900834
3225	3R_DroMel_CAF1	8,594,954 – 8,595,048	- - - - - - - - -	5216	8,594,954 – 8,595,048	-	6	97	81.68	-1.69	0.62	0.536783
3226	3R_DroMel_CAF1	8,598,987 – 8,599,085	- - - - - - - - -	5217	8,598,987 – 8,599,085	-	6	101	77.59	-2.22	0.50	0.852420
3227	3R_DroMel_CAF1	8,600,517 – 8,600,613	- - - - - - - - -	5218	8,600,517 – 8,600,613	-	6	120	75.68	-2.02	0.47	0.759633
3228	3R_DroMel_CAF1	8,606,319 – 8,606,415	- - - - - - - - -	5219	8,606,319 – 8,606,415	+	6	106	76.12	-1.11	0.77	0.836099
3229	3R_DroMel_CAF1	8,614,323 – 8,614,415	- - - - - - - - -	5220	8,614,323 – 8,614,415	+	5	92	99.13	-2.02	0.96	0.992399
3230	3R_DroMel_CAF1	8,618,839 – 8,618,952	- - - - - - - - -	5221	8,618,839 – 8,618,936	-	6	113	77.08	-2.19	0.64	0.966682
				5222	8,618,856 – 8,618,952	+	6	120	80.83	-1.34	0.70	0.601556
				5223	8,618,856 – 8,618,952	-	6	120	80.83	-1.85	0.59	0.605818
3231	3R_DroMel_CAF1	8,621,706 – 8,621,870	- - - - - - - - -	5224	8,621,706 – 8,621,804	+	6	98	91.50	-1.98	0.88	0.938347
				5225	8,621,706 – 8,621,804	-	6	98	91.50	-3.14	0.85	0.991481
				5226	8,621,745 – 8,621,843	-	5	98	95.51	-1.51	0.95	0.974666
				5227	8,621,765 – 8,621,870	+	5	105	93.14	-1.45	0.84	0.776893
				5228	8,621,765 – 8,621,870	-	5	105	93.14	-1.35	0.92	0.893071
3232	3R_DroMel_CAF1	8,629,966 – 8,630,069	- - - - - - - - -	5229	8,629,966 – 8,630,069	+	5	103	92.23	-1.78	0.87	0.976266
3233	3R_DroMel_CAF1	8,632,325 – 8,632,429	- - - - - - - - -	5230	8,632,325 – 8,632,429	+	6	117	93.67	-1.19	0.90	0.616499
3233	3R_DroMel_CAF1	8,632,325 – 8,632,429	- - - - - - - - -	5231	8,632,325 – 8,632,429	-	6	117	93.67	-1.17	0.97	0.950109
3234	3R_DroMel_CAF1	8,633,167 – 8,633,272	- - - - - - - - -	5232	8,633,167 – 8,633,272	+	6	106	76.33	-1.24	0.69	0.767282
3235	3R_DroMel_CAF1	8,643,789 – 8,643,895	- - - - - - - - -	5233	8,643,789 – 8,643,895	+	5	120	80.05	-1.55	0.70	0.597502
3236	3R_DroMel_CAF1	8,644,115 – 8,644,210	- - - - - - - - -	5234	8,644,115 – 8,644,210	+	6	95	88.35	-3.32	0.82	0.967709
3237	3R_DroMel_CAF1	8,644,302 – 8,644,392	- - - - - - - - -	5235	8,644,302 – 8,644,392	+	6	101	79.04	-2.07	0.61	0.877948
3238	3R_DroMel_CAF1	8,649,524 – 8,649,632	- - - - - - - - -	5236	8,649,524 – 8,649,632	+	6	114	79.71	-2.39	0.53	0.831023
3238	3R_DroMel_CAF1	8,649,524 – 8,649,632	- - - - - - - - -	5237	8,649,524 – 8,649,632	-	6	114	79.71	-2.23	0.67	0.925883
3239	3R_DroMel_CAF1	8,650,426 – 8,650,546	- - - - - - - - -	5238	8,650,426 – 8,650,520	+	4	105	78.40	-2.06	0.55	0.683421
3239	3R_DroMel_CAF1	8,650,426 – 8,650,546	- - - - - - - - -	5239	8,650,453 – 8,650,546	+	4	103	82.04	-1.77	0.64	0.621108
3240	3R_DroMel_CAF1	8,653,115 – 8,653,207	- - - - - - - - -	5240	8,653,115 – 8,653,207	-	6	103	79.83	-1.85	0.62	0.772514
3241	3R_DroMel_CAF1	8,653,482 – 8,653,591	- - - - - - - - -	5241	8,653,482 – 8,653,591	+	6	120	82.19	-1.75	0.63	0.529765
3242	3R_DroMel_CAF1	8,656,078 – 8,656,173	- - - - - - - - -	5242	8,656,078 – 8,656,173	-	5	105	90.62	-1.70	0.82	0.874348
3243	3R_DroMel_CAF1	8,657,418 – 8,657,508	- - - - - - - - -	5243	8,657,418 – 8,657,508	-	6	100	87.79	-3.59	0.86	0.994270
3244	3R_DroMel_CAF1	8,657,586 – 8,657,702	- - - - - - - - -	5244	8,657,586 – 8,657,702	+	5	118	92.12	-1.42	0.90	0.884323
3245	3R_DroMel_CAF1	8,658,054 – 8,658,192	- - - - - - - - -	5245	8,658,054 – 8,658,152	+	6	110	81.12	-1.58	0.81	0.779028
				5246	8,658,072 – 8,658,192	+	6	120	95.22	-1.57	0.85	0.599739
				5247	8,658,072 – 8,658,192	-	6	120	95.22	-1.34	0.90	0.811786
3246	3R_DroMel_CAF1	8,658,268 – 8,658,374	- - - - - - - - -	5248	8,658,268 – 8,658,374	-	6	110	95.09	-1.69	0.86	0.725302
3247	3R_DroMel_CAF1	8,660,709 – 8,660,807	- - - - - - - - -	5249	8,660,709 – 8,660,807	+	3	98	63.37	-2.01	0.50	0.983396
3248	3R_DroMel_CAF1	8,662,964 – 8,663,074	- - - - - - - - -	5250	8,662,964 – 8,663,074	+	6	115	82.21	-1.79	0.76	0.751108
3249	3R_DroMel_CAF1	8,663,667 – 8,663,851	- - - - - - - - -	5251	8,663,667 – 8,663,779	-	6	120	85.68	-2.57	0.79	0.798384
				5252	8,663,703 – 8,663,819	+	6	120	95.15	-1.30	0.90	0.783688
				5253	8,663,703 – 8,663,819	-	6	120	95.15	-2.97	0.94	0.999921
				5254	8,663,739 – 8,663,851	-	6	119	78.07	-2.40	0.68	0.972634
3250	3R_DroMel_CAF1	8,675,881 – 8,675,984	- - - - - - - - -	5255	8,675,881 – 8,675,984	+	5	103	91.50	-2.26	0.80	0.968701
3250	3R_DroMel_CAF1	8,675,881 – 8,675,984	- - - - - - - - -	5256	8,675,881 – 8,675,984	-	5	103	91.50	-3.29	0.90	0.999953
3251	3R_DroMel_CAF1	8,679,158 – 8,679,254	- - - - - - - - -	5257	8,679,158 – 8,679,254	+	6	120	79.48	-1.48	0.62	0.566007
3252	3R_DroMel_CAF1	8,682,979 – 8,683,086	- - - - - - - - -	5258	8,682,979 – 8,683,086	+	6	107	78.19	-1.46	0.60	0.525393
3253	3R_DroMel_CAF1	8,687,808 – 8,687,913	- - - - - - - - -	5259	8,687,808 – 8,687,913	+	5	105	91.05	-1.90	0.77	0.834084
3254	3R_DroMel_CAF1	8,688,025 – 8,688,128	- - - - - - - - -	5260	8,688,025 – 8,688,128	-	4	107	82.86	-1.51	0.86	0.657860
3255	3R_DroMel_CAF1	8,689,510 – 8,689,600	- - - - - - - - -	5261	8,689,510 – 8,689,600	+	6	95	82.55	-2.17	0.66	0.699577
3256	3R_DroMel_CAF1	8,691,677 – 8,691,789	- - - - - - - - -	5262	8,691,677 – 8,691,789	-	5	116	90.42	-1.86	0.72	0.549906
3257	3R_DroMel_CAF1	8,691,801 – 8,691,920	- - - - - - - - -	5263	8,691,801 – 8,691,920	+	5	119	92.15	-1.78	0.93	0.994358
3257	3R_DroMel_CAF1	8,691,801 – 8,691,920	- - - - - - - - -	5264	8,691,801 – 8,691,920	-	5	119	92.15	-1.57	0.85	0.881530
3258	3R_DroMel_CAF1	8,697,030 – 8,697,127	- - - - - - - - -	5265	8,697,030 – 8,697,127	+	6	99	81.42	-1.63	0.63	0.555209
3259	3R_DroMel_CAF1	8,698,466 – 8,698,564	- - - - - - - - -	5266	8,698,466 – 8,698,564	-	6	99	80.43	-1.26	0.72	0.603968
3260	3R_DroMel_CAF1	8,704,882 – 8,704,987	- - - - - - - - -	5267	8,704,882 – 8,704,987	-	6	120	79.32	-1.44	0.61	0.500000
3261	3R_DroMel_CAF1	8,705,188 – 8,705,287	- - - - - - - - -	5268	8,705,188 – 8,705,287	-	6	109	83.79	-1.98	0.89	0.902446
3262	3R_DroMel_CAF1	8,708,074 – 8,708,166	- - - - - - - - -	5269	8,708,074 – 8,708,166	+	6	92	79.13	-1.63	0.64	0.739795
3263	3R_DroMel_CAF1	8,713,412 – 8,713,510	- - - - - - - - -	5270	8,713,412 – 8,713,510	-	6	101	75.67	-1.35	0.82	0.937356
3264	3R_DroMel_CAF1	8,718,300 – 8,718,450	- - - "knownCDS=Parent=FBtr0082683;Name=CG14387-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14387-RA" - - - - -	5271	8,718,300 – 8,718,410	+	6	120	83.77	-2.98	0.78	0.907909
				5272	8,718,300 – 8,718,410	-	6	120	83.77	-3.40	0.79	0.941965
				5273	8,718,330 – 8,718,450	+	6	120	88.50	-5.18	0.90	0.999100
				5274	8,718,330 – 8,718,450	-	6	120	88.50	-4.19	0.84	0.995113
3265	3R_DroMel_CAF1	8,724,718 – 8,724,814	- - - - - - - - -	5275	8,724,718 – 8,724,814	-	6	99	75.19	-1.29	0.69	0.822163
3266	3R_DroMel_CAF1	8,726,276 – 8,726,382	- - - - - - - - -	5276	8,726,276 – 8,726,382	+	4	106	87.11	-1.59	0.95	0.863446
3267	3R_DroMel_CAF1	8,726,507 – 8,726,608	- - - - - - - - -	5277	8,726,507 – 8,726,608	+	6	108	78.98	-1.35	0.64	0.582006
3268	3R_DroMel_CAF1	8,727,106 – 8,727,202	- - - - - - - - -	5278	8,727,106 – 8,727,202	-	6	96	93.89	-2.49	0.81	0.754418
3269	3R_DroMel_CAF1	8,727,514 – 8,727,643	- - - - - - - - -	5279	8,727,514 – 8,727,613	+	6	114	78.03	-2.71	0.55	0.974732
3269	3R_DroMel_CAF1	8,727,514 – 8,727,643	- - - - - - - - -	5280	8,727,543 – 8,727,643	+	6	112	77.23	-2.28	0.67	0.974778
3270	3R_DroMel_CAF1	8,733,745 – 8,733,865	- - - - - - - - -	5281	8,733,745 – 8,733,865	-	3	120	85.27	-2.11	0.70	0.650522
3271	3R_DroMel_CAF1	8,734,141 – 8,734,236	- - - - - - - - -	5282	8,734,141 – 8,734,236	+	6	96	87.79	-2.49	0.87	0.963397
3272	3R_DroMel_CAF1	8,735,884 – 8,736,044	- - - "knownCDS=Parent=FBtr0082685;Name=CG10909-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10909-RA" - - - - -	5283	8,735,884 – 8,736,004	-	6	120	75.57	-0.93	0.77	0.760072
3272	3R_DroMel_CAF1	8,735,884 – 8,736,044		5284	8,735,924 – 8,736,044	-	6	120	81.39	-2.26	0.73	0.878937
3273	3R_DroMel_CAF1	8,736,521 – 8,736,612	- - - "knownCDS=Parent=FBtr0082685;Name=CG10909-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10909-RA" - - - - -	5285	8,736,521 – 8,736,612	+	5	91	95.16	-1.46	0.91	0.928693
3274	3R_DroMel_CAF1	8,737,782 – 8,737,875	- - - - - - - - -	5286	8,737,782 – 8,737,875	+	6	102	79.55	-1.47	0.75	0.802369
3275	3R_DroMel_CAF1	8,740,927 – 8,741,017	- - - - - - - - -	5287	8,740,927 – 8,741,017	+	6	90	93.78	-2.47	0.88	0.992983
3275	3R_DroMel_CAF1	8,740,927 – 8,741,017	- - - - - - - - -	5288	8,740,927 – 8,741,017	-	6	90	93.78	-2.91	0.90	0.999332
3276	3R_DroMel_CAF1	8,743,685 – 8,743,789	- - - - - - - - -	5289	8,743,685 – 8,743,789	-	6	107	81.18	-2.90	0.60	0.913004
3277	3R_DroMel_CAF1	8,756,521 – 8,756,628	- - - - - - - - -	5290	8,756,521 – 8,756,628	-	6	117	75.51	-1.84	0.56	0.860183
3278	3R_DroMel_CAF1	8,757,680 – 8,757,774	- - - - - - - - -	5291	8,757,680 – 8,757,774	+	5	95	77.44	-1.96	0.79	0.971897
3279	3R_DroMel_CAF1	8,762,599 – 8,762,697	- - - - - - - - -	5292	8,762,599 – 8,762,697	-	6	120	83.45	-2.53	0.77	0.848063
3280	3R_DroMel_CAF1	8,768,619 – 8,768,710	- - - - - - - - -	5293	8,768,619 – 8,768,710	-	5	91	82.03	-1.85	0.68	0.731696
3281	3R_DroMel_CAF1	8,769,080 – 8,769,185	- - - - - - - - -	5294	8,769,080 – 8,769,185	+	6	107	81.52	-2.26	0.58	0.708357
3282	3R_DroMel_CAF1	8,771,133 – 8,771,226	- - - - - - - - -	5295	8,771,133 – 8,771,226	+	6	98	90.21	-2.89	0.85	0.984265
3282	3R_DroMel_CAF1	8,771,133 – 8,771,226	- - - - - - - - -	5296	8,771,133 – 8,771,226	-	6	98	90.21	-2.51	0.81	0.809924
3283	3R_DroMel_CAF1	8,772,176 – 8,772,266	- - - - - - - - -	5297	8,772,176 – 8,772,266	+	6	99	69.65	-2.60	0.61	0.996156
3284	3R_DroMel_CAF1	8,775,327 – 8,775,417	- - - - - - - - -	5298	8,775,327 – 8,775,417	-	5	90	97.78	-1.23	0.95	0.695016
3285	3R_DroMel_CAF1	8,776,691 – 8,776,784	- - - - - - - - -	5299	8,776,691 – 8,776,784	+	6	95	87.14	-2.48	0.82	0.865900
3286	3R_DroMel_CAF1	8,780,851 – 8,780,941	- - - - - - - - -	5300	8,780,851 – 8,780,941	-	6	120	75.92	-1.11	0.66	0.542201
3287	3R_DroMel_CAF1	8,784,337 – 8,784,468	- - - - - - - - -	5301	8,784,337 – 8,784,428	+	4	91	88.07	-1.84	0.84	0.862844
				5302	8,784,337 – 8,784,428	-	4	91	88.07	-2.01	0.89	0.946268
				5303	8,784,355 – 8,784,468	-	4	113	76.04	-1.72	0.59	0.566379
3288	3R_DroMel_CAF1	8,796,467 – 8,796,560	- - - "knownCDS=Parent=FBtr0082727;Name=CG7381-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7381-RA" - - - - -	5304	8,796,467 – 8,796,560	-	6	105	77.35	-0.97	0.71	0.540980
3289	3R_DroMel_CAF1	8,817,481 – 8,817,681	- - - "knownCDS=Parent=FBtr0082723;Name=yellow-f-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18550-RA" - - - - -	5305	8,817,481 – 8,817,601	+	5	120	95.17	-2.74	0.90	0.999756
				5306	8,817,481 – 8,817,601	-	5	120	95.17	-1.59	0.84	0.820654
				5307	8,817,521 – 8,817,641	+	5	120	94.50	-3.09	0.92	0.999963
				5308	8,817,521 – 8,817,641	-	5	120	94.50	-1.76	0.80	0.796619
				5309	8,817,561 – 8,817,681	+	5	120	94.33	-1.26	0.89	0.709751
3290	3R_DroMel_CAF1	8,818,001 – 8,818,121	- - - "knownCDS=Parent=FBtr0082723;Name=yellow-f-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18550-RA" - - - - -	5310	8,818,001 – 8,818,121	+	5	120	90.50	-1.69	0.80	0.798747
3291	3R_DroMel_CAF1	8,818,356 – 8,818,475	- - - "knownCDS=Parent=FBtr0082723;Name=yellow-f-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18550-RA" - - - - -	5311	8,818,356 – 8,818,475	-	5	120	87.05	-1.42	0.83	0.530751
3292	3R_DroMel_CAF1	8,818,729 – 8,818,869	- - - "knownCDS=Parent=FBtr0082723;Name=yellow-f-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18550-RA" - - - - -	5312	8,818,729 – 8,818,849	+	5	120	91.33	-2.33	0.85	0.995553
				5313	8,818,729 – 8,818,849	-	5	120	91.33	-1.63	0.77	0.637287
				5314	8,818,769 – 8,818,869	-	5	120	83.01	-1.53	0.75	0.538927
3293	3R_DroMel_CAF1	8,824,392 – 8,824,635	- - - "knownCDS=Parent=FBtr0082696;Name=CG7518-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7518-RB" - - - - -	5315	8,824,392 – 8,824,485	+	4	105	88.02	-1.95	0.79	0.858247
				5316	8,824,449 – 8,824,557	+	5	112	94.39	-1.46	0.93	0.954820
				5317	8,824,449 – 8,824,557	-	5	112	94.39	-1.66	0.93	0.989731
				5318	8,824,485 – 8,824,595	-	5	112	95.31	-2.36	0.91	0.999427
				5319	8,824,519 – 8,824,635	-	5	118	95.89	-1.14	0.95	0.690609
3294	3R_DroMel_CAF1	8,825,114 – 8,825,205	- - - - - - - - -	5320	8,825,114 – 8,825,205	-	5	92	88.66	-2.08	0.72	0.752635
3295	3R_DroMel_CAF1	8,826,638 – 8,826,733	- - - - - - - - -	5321	8,826,638 – 8,826,733	+	6	95	80.89	-1.30	0.68	0.532410
3295	3R_DroMel_CAF1	8,826,638 – 8,826,733	- - - - - - - - -	5322	8,826,638 – 8,826,733	-	6	95	80.89	-2.19	0.58	0.737137
3296	3R_DroMel_CAF1	8,827,609 – 8,827,705	- - - - - - - - -	5323	8,827,609 – 8,827,705	-	6	97	71.89	-1.76	0.41	0.526043
3297	3R_DroMel_CAF1	8,829,014 – 8,829,106	- - "RNAmicro=f:8829014_t:8829126_strand:-_p:0.554772" "knownCDS=Parent=FBtr0082696;Name=CG7518-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7518-RB" - - - - -	5324	8,829,014 – 8,829,106	+	4	113	79.70	-2.01	0.74	0.927114
3297	3R_DroMel_CAF1	8,829,014 – 8,829,106		5325	8,829,014 – 8,829,106	-	4	113	79.70	-2.20	0.71	0.964186
3298	3R_DroMel_CAF1	8,829,345 – 8,829,462	- - - "knownCDS=Parent=FBtr0082696;Name=CG7518-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7518-RB" - - - - -	5326	8,829,345 – 8,829,462	+	6	120	81.07	-1.20	0.76	0.562083
3299	3R_DroMel_CAF1	8,829,901 – 8,830,017	- - - "knownCDS=Parent=FBtr0082696;Name=CG7518-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7518-RB" - - - - -	5327	8,829,901 – 8,830,017	+	6	116	77.76	-1.69	0.64	0.842547
3300	3R_DroMel_CAF1	8,832,228 – 8,832,318	- - - "knownCDS=Parent=FBtr0082696;Name=CG7518-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7518-RB" - - - - -	5328	8,832,228 – 8,832,318	+	4	113	73.53	-1.63	0.59	0.582818
3301	3R_DroMel_CAF1	8,832,853 – 8,832,961	- - - "knownCDS=Parent=FBtr0082696;Name=CG7518-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7518-RB" - - - - -	5329	8,832,853 – 8,832,961	+	6	108	80.01	-1.49	0.64	0.615600
3302	3R_DroMel_CAF1	8,833,567 – 8,833,680	- - - "knownCDS=Parent=FBtr0082697;Name=CG7518-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7518-RA" - - - - -	5330	8,833,567 – 8,833,680	+	6	117	76.16	-1.66	0.53	0.551249
3303	3R_DroMel_CAF1	8,845,334 – 8,845,435	- - - "knownCDS=Parent=FBtr0082701, FBtr0082699, FBtr0082700, FBtr0082702, FBtr0100161;Name=CtBP-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7583-RB, FlyBase+Annotation+IDs:CG7583-RA, FlyBase+Annotation+IDs:CG7583-RC, FlyBase+Annotation+IDs:CG7583-RD, FlyBase+Annotation+IDs:CG7583-RE" - - - - -	5331	8,845,334 – 8,845,435	+	6	120	79.07	-1.32	0.70	0.697405
3304	3R_DroMel_CAF1	8,846,552 – 8,846,667	- - - "knownCDS=Parent=FBtr0082701, FBtr0082699, FBtr0082700, FBtr0082702, FBtr0100161;Name=CtBP-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7583-RB, FlyBase+Annotation+IDs:CG7583-RA, FlyBase+Annotation+IDs:CG7583-RC, FlyBase+Annotation+IDs:CG7583-RD, FlyBase+Annotation+IDs:CG7583-RE" - - - - -	5332	8,846,552 – 8,846,667	+	6	120	74.05	-0.89	0.75	0.752624
3305	3R_DroMel_CAF1	8,854,858 – 8,854,976	- - - - - - - - -	5333	8,854,858 – 8,854,976	-	6	118	80.45	-1.73	0.68	0.773795
3306	3R_DroMel_CAF1	8,856,014 – 8,856,104	- - - - - - - - -	5334	8,856,014 – 8,856,104	-	6	94	74.89	-2.42	0.34	0.839009
3307	3R_DroMel_CAF1	8,864,945 – 8,865,049	- - - - - - - - -	5335	8,864,945 – 8,865,049	+	6	109	75.59	-0.76	0.83	0.713363
3308	3R_DroMel_CAF1	8,870,014 – 8,870,139	- - - "knownCDS=Parent=FBtr0082706;Name=CG11670-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11670-RA" - - - - -	5336	8,870,014 – 8,870,110	+	6	105	80.23	-2.32	0.60	0.870617
3308	3R_DroMel_CAF1	8,870,014 – 8,870,139		5337	8,870,030 – 8,870,139	+	6	117	78.99	-1.37	0.69	0.716857
3309	3R_DroMel_CAF1	8,876,826 – 8,876,932	- - - "knownCDS=Parent=FBtr0082715;Name=CG7966-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7966-RA" - - - - -	5338	8,876,826 – 8,876,932	+	6	113	77.97	-1.37	0.67	0.732871
3310	3R_DroMel_CAF1	8,878,118 – 8,878,220	- - - "knownCDS=Parent=FBtr0082709;Name=DDB1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7769-RA" - - - - -	5339	8,878,118 – 8,878,220	+	6	103	78.01	-1.50	0.80	0.898728
3311	3R_DroMel_CAF1	8,889,493 – 8,889,586	- - - - - - - - -	5340	8,889,493 – 8,889,586	+	5	107	71.10	-1.79	0.34	0.687970
3312	3R_DroMel_CAF1	8,895,830 – 8,895,921	- - - - - - - - -	5341	8,895,830 – 8,895,921	-	6	101	80.32	-1.67	0.60	0.583652
3313	3R_DroMel_CAF1	8,897,767 – 8,897,888	- - - - - - - - -	5342	8,897,767 – 8,897,862	+	6	102	71.86	-3.02	0.23	0.970207
				5343	8,897,767 – 8,897,862	-	6	102	71.86	-2.65	0.25	0.922010
				5344	8,897,787 – 8,897,888	+	6	105	75.00	-2.88	0.30	0.943731
3314	3R_DroMel_CAF1	8,898,345 – 8,898,435	- - - - - - - - -	5345	8,898,345 – 8,898,435	+	6	97	84.04	-1.48	0.81	0.530455
3315	3R_DroMel_CAF1	8,901,444 – 8,901,536	- - - - - - - - -	5346	8,901,444 – 8,901,536	-	6	98	74.00	-0.63	0.79	0.650275
3316	3R_DroMel_CAF1	8,904,153 – 8,904,262	- - - - - - - - -	5347	8,904,153 – 8,904,262	-	5	112	75.27	-2.19	0.22	0.968318
3317	3R_DroMel_CAF1	8,904,624 – 8,904,720	- - - - - - - - -	5348	8,904,624 – 8,904,720	-	6	100	75.81	-2.19	0.41	0.744724
3318	3R_DroMel_CAF1	8,914,282 – 8,914,391	- - - - - - - - -	5349	8,914,282 – 8,914,391	+	5	109	87.43	-2.27	0.78	0.948519
3318	3R_DroMel_CAF1	8,914,282 – 8,914,391	- - - - - - - - -	5350	8,914,282 – 8,914,391	-	5	109	87.43	-1.63	0.75	0.599158
3319	3R_DroMel_CAF1	8,917,895 – 8,917,986	- - - - - - - - -	5351	8,917,895 – 8,917,986	-	5	101	82.63	-2.47	0.70	0.956087
3320	3R_DroMel_CAF1	8,920,188 – 8,920,281	- - - - - - - - -	5352	8,920,188 – 8,920,281	-	6	93	74.66	-1.80	0.45	0.500000
3321	3R_DroMel_CAF1	8,922,883 – 8,923,026	- - - - - - - - -	5353	8,922,883 – 8,922,992	-	6	120	89.67	-2.22	0.94	0.996997
				5354	8,922,913 – 8,923,026	+	6	120	84.10	-1.70	0.87	0.766826
				5355	8,922,913 – 8,923,026	-	6	120	84.10	-2.11	0.75	0.686784
3322	3R_DroMel_CAF1	8,923,442 – 8,923,541	- - - - - - - - -	5356	8,923,442 – 8,923,541	+	5	101	89.64	-1.74	0.77	0.746770
3323	3R_DroMel_CAF1	8,924,826 – 8,924,930	- - - - - - - - -	5357	8,924,826 – 8,924,930	-	5	104	93.46	-2.27	0.89	0.998658
3324	3R_DroMel_CAF1	8,926,252 – 8,926,342	- - - - - - - - -	5358	8,926,252 – 8,926,342	-	5	104	76.24	-1.66	0.65	0.773368
3325	3R_DroMel_CAF1	8,928,790 – 8,928,887	- - - - - - - - -	5359	8,928,790 – 8,928,887	+	6	108	79.26	-1.87	0.57	0.702273
3326	3R_DroMel_CAF1	8,929,130 – 8,929,260	- - - - - - - - -	5360	8,929,130 – 8,929,241	+	6	112	79.09	-1.32	0.73	0.750045
3326	3R_DroMel_CAF1	8,929,130 – 8,929,260	- - - - - - - - -	5361	8,929,169 – 8,929,260	+	5	94	66.74	-1.81	0.73	0.989958
3327	3R_DroMel_CAF1	8,938,593 – 8,938,692	- - - - - - - - -	5362	8,938,593 – 8,938,692	-	6	99	90.77	-2.05	0.90	0.980299
3328	3R_DroMel_CAF1	8,943,693 – 8,943,872	- - - - - - - - -	5363	8,943,693 – 8,943,808	-	5	115	72.60	-1.96	0.31	0.894014
3328	3R_DroMel_CAF1	8,943,693 – 8,943,872	- - - - - - - - -	5364	8,943,773 – 8,943,872	-	6	105	79.29	-1.68	0.74	0.874046
3329	3R_DroMel_CAF1	8,943,913 – 8,944,012	- - - - - - - - -	5365	8,943,913 – 8,944,012	+	5	113	67.82	-1.97	0.29	0.716699
3330	3R_DroMel_CAF1	8,945,518 – 8,945,621	- - - - - - - - -	5366	8,945,518 – 8,945,621	+	6	117	82.13	-2.03	0.63	0.640731
3331	3R_DroMel_CAF1	8,952,129 – 8,952,324	- - - "knownCDS=Parent=FBtr0082714;Name=CG17319-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17319-RA" - - - - -	5367	8,952,129 – 8,952,219	+	6	95	82.24	-1.89	0.62	0.572288
				5368	8,952,219 – 8,952,324	+	6	105	75.57	-1.29	0.62	0.594006
				5369	8,952,219 – 8,952,324	-	6	105	75.57	-1.79	0.48	0.553745
3332	3R_DroMel_CAF1	8,953,336 – 8,953,426	- - - "knownCDS=Parent=FBtr0082714;Name=CG17319-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17319-RA" - - - - -	5370	8,953,336 – 8,953,426	+	6	94	80.10	-2.55	0.78	0.952951
3333	3R_DroMel_CAF1	8,955,264 – 8,955,361	- - - - - - - - -	5371	8,955,264 – 8,955,361	-	6	118	74.76	-1.85	0.53	0.845388
3334	3R_DroMel_CAF1	8,955,412 – 8,955,502	- - - - - - - - -	5372	8,955,412 – 8,955,502	-	6	100	74.77	-1.77	0.63	0.935143
3335	3R_DroMel_CAF1	8,955,925 – 8,956,018	- - - - - - - - -	5373	8,955,925 – 8,956,018	+	6	94	93.50	-1.22	0.90	0.662275
3336	3R_DroMel_CAF1	8,975,937 – 8,976,036	- - - - - - - - -	5374	8,975,937 – 8,976,036	+	6	117	76.30	-1.46	0.68	0.857125
3337	3R_DroMel_CAF1	8,980,828 – 8,980,931	- - - - - - - - -	5375	8,980,828 – 8,980,931	-	5	106	71.79	-1.60	0.06	0.670676
3338	3R_DroMel_CAF1	8,989,418 – 8,989,520	- - - "knownCDS=Parent=FBtr0082712;Name=timeout-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7855-RA" - - - - -	5376	8,989,418 – 8,989,520	-	6	114	74.35	-3.04	0.59	0.997397
3339	3R_DroMel_CAF1	8,990,512 – 8,990,603	- - - - - - - - -	5377	8,990,512 – 8,990,603	+	5	97	88.14	-2.11	0.80	0.950030
3339	3R_DroMel_CAF1	8,990,512 – 8,990,603	- - - - - - - - -	5378	8,990,512 – 8,990,603	-	5	97	88.14	-1.85	0.81	0.890074
3340	3R_DroMel_CAF1	8,992,392 – 8,992,493	- - - - - - - - -	5379	8,992,392 – 8,992,493	+	6	113	81.05	-1.57	0.65	0.608697
3340	3R_DroMel_CAF1	8,992,392 – 8,992,493	- - - - - - - - -	5380	8,992,392 – 8,992,493	-	6	113	81.05	-1.71	0.71	0.756814
3341	3R_DroMel_CAF1	8,994,272 – 8,994,365	- - - - - - - - -	5381	8,994,272 – 8,994,365	+	5	93	98.28	-1.49	0.96	0.923172
3341	3R_DroMel_CAF1	8,994,272 – 8,994,365	- - - - - - - - -	5382	8,994,272 – 8,994,365	-	5	93	98.28	-1.44	0.99	0.930581
3342	3R_DroMel_CAF1	8,996,600 – 8,996,691	- - - - - - - - -	5383	8,996,600 – 8,996,691	+	6	97	84.44	-2.57	0.65	0.522740
3343	3R_DroMel_CAF1	9,001,518 – 9,001,614	- - - - - - - - -	5384	9,001,518 – 9,001,614	+	6	120	79.22	-1.25	0.69	0.620675
3344	3R_DroMel_CAF1	9,002,140 – 9,002,238	- - - - - - - - -	5385	9,002,140 – 9,002,238	-	6	99	92.20	-2.41	0.81	0.782138
3345	3R_DroMel_CAF1	9,005,035 – 9,005,126	- - - - - - - - -	5386	9,005,035 – 9,005,126	-	5	91	96.48	-1.45	0.95	0.949197
3346	3R_DroMel_CAF1	9,012,004 – 9,012,164	- - - "knownCDS=Parent=FBtr0082783;Name=CG8508-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8508-RA" - - - - -	5387	9,012,004 – 9,012,124	+	5	120	88.67	-3.55	0.68	0.951872
				5388	9,012,004 – 9,012,124	-	5	120	88.67	-5.25	0.68	0.987265
				5389	9,012,044 – 9,012,164	+	4	120	90.00	-3.13	0.84	0.989760
				5390	9,012,044 – 9,012,164	-	4	120	90.00	-3.12	0.69	0.791967
3347	3R_DroMel_CAF1	9,016,081 – 9,016,174	- - - - - - - - -	5391	9,016,081 – 9,016,174	+	5	93	91.07	-2.06	0.74	0.773052
3347	3R_DroMel_CAF1	9,016,081 – 9,016,174	- - - - - - - - -	5392	9,016,081 – 9,016,174	-	5	93	91.07	-2.54	0.81	0.993468
3348	3R_DroMel_CAF1	9,020,141 – 9,020,241	- - - - - - - - -	5393	9,020,141 – 9,020,241	+	6	111	82.46	-2.95	0.81	0.945862
3349	3R_DroMel_CAF1	9,024,657 – 9,024,753	- - - - - - - - -	5394	9,024,657 – 9,024,753	-	4	98	84.34	-1.46	0.68	0.500000
3350	3R_DroMel_CAF1	9,035,964 – 9,036,073	- - - "knownCDS=Parent=FBtr0082782;Name=CG8483-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8483-RA" - - - - -	5395	9,035,964 – 9,036,073	+	6	110	79.08	-1.86	0.52	0.522924
3350	3R_DroMel_CAF1	9,035,964 – 9,036,073		5396	9,035,964 – 9,036,073	-	6	110	79.08	-1.10	0.69	0.505713
3351	3R_DroMel_CAF1	9,037,733 – 9,037,823	- - - - - - - - -	5397	9,037,733 – 9,037,823	+	6	104	75.86	-0.92	0.76	0.705347
3351	3R_DroMel_CAF1	9,037,733 – 9,037,823	- - - - - - - - -	5398	9,037,733 – 9,037,823	-	6	104	75.86	-1.43	0.67	0.835203
3352	3R_DroMel_CAF1	9,042,421 – 9,042,524	- - - - - - - - -	5399	9,042,421 – 9,042,524	-	5	113	87.84	-1.95	0.69	0.616288
3353	3R_DroMel_CAF1	9,043,904 – 9,044,005	- - - - - - - - -	5400	9,043,904 – 9,044,005	-	6	116	80.62	-1.43	0.64	0.539161
3354	3R_DroMel_CAF1	9,044,903 – 9,045,004	- - - - - - - - -	5401	9,044,903 – 9,045,004	-	5	106	91.07	-1.91	0.77	0.829117
3355	3R_DroMel_CAF1	9,052,558 – 9,052,652	- - - - - - - - -	5402	9,052,558 – 9,052,652	-	6	120	80.18	-1.94	0.87	0.922679
3356	3R_DroMel_CAF1	9,052,819 – 9,052,923	- - "RNAmicro=f:9052819_t:9052924_strand:+_p:0.964214" - - - - - -	5403	9,052,819 – 9,052,923	-	6	106	86.82	-2.83	0.82	0.922760
3357	3R_DroMel_CAF1	9,058,829 – 9,058,923	- - - - - - - - -	5404	9,058,829 – 9,058,923	+	3	94	89.32	-2.11	0.75	0.514932
3358	3R_DroMel_CAF1	9,059,756 – 9,059,861	- - - - - - - - -	5405	9,059,756 – 9,059,861	-	6	115	73.61	-1.30	0.66	0.798802
3359	3R_DroMel_CAF1	9,062,829 – 9,062,928	- - - "knownCDS=Parent=FBtr0082780;Name=Ace-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17907-RA" - - - - -	5406	9,062,829 – 9,062,928	+	6	111	78.51	-1.19	0.70	0.633416
3360	3R_DroMel_CAF1	9,070,083 – 9,070,180	- - - - - - - - -	5407	9,070,083 – 9,070,180	+	4	103	84.19	-1.85	0.77	0.816559
3360	3R_DroMel_CAF1	9,070,083 – 9,070,180	- - - - - - - - -	5408	9,070,083 – 9,070,180	-	4	103	84.19	-1.97	0.75	0.860897
3361	3R_DroMel_CAF1	9,077,408 – 9,077,512	- - - - - - - - -	5409	9,077,408 – 9,077,512	+	6	116	81.58	-2.12	0.62	0.727009
3361	3R_DroMel_CAF1	9,077,408 – 9,077,512	- - - - - - - - -	5410	9,077,408 – 9,077,512	-	6	116	81.58	-1.87	0.70	0.764469
3362	3R_DroMel_CAF1	9,082,906 – 9,083,011	- - - - - - - - -	5411	9,082,906 – 9,083,011	-	5	106	82.81	-2.08	0.62	0.730935
3363	3R_DroMel_CAF1	9,090,369 – 9,090,489	- - - "knownCDS=Parent=FBtr0082736;Name=Su(var)3-7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8599-RA" - - - - -	5412	9,090,369 – 9,090,489	-	6	120	73.53	-2.19	0.44	0.926487
3364	3R_DroMel_CAF1	9,091,693 – 9,091,798	- - - "knownCDS=Parent=FBtr0082736;Name=Su(var)3-7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8599-RA" - - - - -	5413	9,091,693 – 9,091,798	+	6	105	66.47	-1.81	0.32	0.566867
3365	3R_DroMel_CAF1	9,092,642 – 9,092,745	- - - "knownCDS=Parent=FBtr0082736;Name=Su(var)3-7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8599-RA" - - - - -	5414	9,092,642 – 9,092,745	+	6	105	80.13	-2.06	0.50	0.500000
3366	3R_DroMel_CAF1	9,098,544 – 9,098,635	- - - - - - - - -	5415	9,098,544 – 9,098,635	-	5	101	88.87	-1.54	0.86	0.812412
3367	3R_DroMel_CAF1	9,099,184 – 9,099,286	- - - - - - - - -	5416	9,099,184 – 9,099,286	+	6	120	85.75	-1.87	0.85	0.781705
3368	3R_DroMel_CAF1	9,099,360 – 9,099,498	- - - - - - - - -	5417	9,099,360 – 9,099,458	+	6	120	80.65	-1.41	0.64	0.530408
3368	3R_DroMel_CAF1	9,099,360 – 9,099,498	- - - - - - - - -	5418	9,099,397 – 9,099,498	+	6	120	86.15	-2.38	0.76	0.595185
3369	3R_DroMel_CAF1	9,100,904 – 9,101,000	- - - - - - - - -	5419	9,100,904 – 9,101,000	+	5	98	91.68	-2.11	0.76	0.872950
3370	3R_DroMel_CAF1	9,103,468 – 9,103,609	- - - - - - - - -	5420	9,103,468 – 9,103,580	-	3	116	83.72	-2.24	0.70	0.810398
3370	3R_DroMel_CAF1	9,103,468 – 9,103,609	- - - - - - - - -	5421	9,103,506 – 9,103,609	-	3	116	77.98	-2.45	0.59	0.949814
3371	3R_DroMel_CAF1	9,103,819 – 9,103,911	- - - - - - - - -	5422	9,103,819 – 9,103,911	-	3	95	92.88	-2.75	0.91	0.959783
3372	3R_DroMel_CAF1	9,104,557 – 9,104,648	- - - - - - - - -	5423	9,104,557 – 9,104,648	+	4	120	72.67	-1.41	0.64	0.514824
3373	3R_DroMel_CAF1	9,106,150 – 9,106,269	- - - - - - - - -	5424	9,106,150 – 9,106,269	-	3	120	69.08	-2.01	0.54	0.973485
3374	3R_DroMel_CAF1	9,108,124 – 9,108,223	- - - "knownCDS=Parent=FBtr0082737;Name=CG8630-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8630-RA" - - - - -	5425	9,108,124 – 9,108,223	-	6	105	76.37	-2.04	0.70	0.974072
3375	3R_DroMel_CAF1	9,110,819 – 9,110,929	- - - "knownCDS=Parent=FBtr0100257;Name=CG15888-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15888-RB" - - - - -	5426	9,110,819 – 9,110,929	+	6	120	80.12	-1.53	0.61	0.523839
3376	3R_DroMel_CAF1	9,117,382 – 9,117,499	- - - "knownCDS=Parent=FBtr0082738;Name=Osi22-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8644-RA" - - - - -	5427	9,117,382 – 9,117,499	+	6	120	77.97	-1.97	0.64	0.920006
3377	3R_DroMel_CAF1	9,119,115 – 9,119,206	- - - - - - - - -	5428	9,119,115 – 9,119,206	-	6	96	78.12	-1.84	0.51	0.552062
3378	3R_DroMel_CAF1	9,122,031 – 9,122,145	- - - - - - - - -	5429	9,122,031 – 9,122,145	-	6	119	78.12	-1.62	0.63	0.784416
3379	3R_DroMel_CAF1	9,122,594 – 9,122,700	- - - "knownCDS=Parent=FBtr0082739;Name=CG8773-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8773-RA" - - - - -	5430	9,122,594 – 9,122,700	+	6	120	79.19	-1.24	0.66	0.532467
3380	3R_DroMel_CAF1	9,127,241 – 9,127,337	- - - - - - - - -	5431	9,127,241 – 9,127,337	-	6	102	75.63	-1.73	0.54	0.725501
3381	3R_DroMel_CAF1	9,128,509 – 9,128,607	- - - "knownCDS=Parent=FBtr0082742;Name=CG32473-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32473-RA" - - - - -	5432	9,128,509 – 9,128,607	+	6	105	78.03	-1.52	0.61	0.659488
3382	3R_DroMel_CAF1	9,130,124 – 9,130,230	- - - "knownCDS=Parent=FBtr0082742;Name=CG32473-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32473-RA" - - - - -	5433	9,130,124 – 9,130,230	-	6	106	79.42	-1.76	0.71	0.872645
3383	3R_DroMel_CAF1	9,134,438 – 9,134,546	- - - "knownCDS=Parent=FBtr0082743;Name=CG32473-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32473-RC" - - - - -	5434	9,134,438 – 9,134,546	+	6	117	75.51	-1.96	0.44	0.621720
3384	3R_DroMel_CAF1	9,144,847 – 9,144,967	- - - - - - - - -	5435	9,144,847 – 9,144,967	+	5	120	87.83	-1.70	0.78	0.731831
3385	3R_DroMel_CAF1	9,151,378 – 9,151,471	- - - - - - - - -	5436	9,151,378 – 9,151,471	+	5	93	93.55	-1.96	0.82	0.944104
3385	3R_DroMel_CAF1	9,151,378 – 9,151,471	- - - - - - - - -	5437	9,151,378 – 9,151,471	-	5	93	93.55	-1.69	0.80	0.770862
3386	3R_DroMel_CAF1	9,157,305 – 9,157,398	- - - "knownCDS=Parent=FBtr0082773, FBtr0082774;Name=CG8795-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8795-RA, FlyBase+Annotation+IDs:CG8795-RB" - - - - -	5438	9,157,305 – 9,157,398	-	6	110	74.92	-0.95	0.68	0.522579
3387	3R_DroMel_CAF1	9,158,028 – 9,158,118	- - - - - - - - -	5439	9,158,028 – 9,158,118	-	6	112	83.42	-2.53	0.81	0.902737
3388	3R_DroMel_CAF1	9,163,721 – 9,163,818	- - - - - - - - -	5440	9,163,721 – 9,163,818	+	6	117	67.87	-2.59	0.45	0.995315
3389	3R_DroMel_CAF1	9,164,078 – 9,164,197	- - - - - - - - -	5441	9,164,078 – 9,164,197	+	3	120	62.67	-1.92	0.44	0.697192
3390	3R_DroMel_CAF1	9,166,917 – 9,167,014	- - - - - - - - -	5442	9,166,917 – 9,167,014	+	5	112	78.07	-2.06	0.57	0.882099
3390	3R_DroMel_CAF1	9,166,917 – 9,167,014	- - - - - - - - -	5443	9,166,917 – 9,167,014	-	5	112	78.07	-2.10	0.46	0.807341
3391	3R_DroMel_CAF1	9,170,187 – 9,170,284	- - - "knownCDS=Parent=FBtr0082745;Name=CG8784-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8784-RA" - - - - -	5444	9,170,187 – 9,170,284	-	6	97	85.98	-2.04	0.79	0.619714
3392	3R_DroMel_CAF1	9,176,927 – 9,177,038	- - - - - - - - -	5445	9,176,927 – 9,177,038	+	6	115	76.63	-1.60	0.65	0.861171
3393	3R_DroMel_CAF1	9,179,102 – 9,179,209	- - - - - - - - -	5446	9,179,102 – 9,179,209	-	3	108	74.05	-2.13	0.60	0.982594
3394	3R_DroMel_CAF1	9,180,915 – 9,181,033	- - - "knownCDS=Parent=FBtr0082746;Name=mthl12-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32853-RA" - - - - -	5447	9,180,915 – 9,181,033	-	5	118	80.37	-1.87	0.59	0.645809
3395	3R_DroMel_CAF1	9,192,643 – 9,192,749	- - - - - - - - -	5448	9,192,643 – 9,192,749	+	5	111	79.72	-1.71	0.74	0.801571
3396	3R_DroMel_CAF1	9,193,323 – 9,193,440	- - - - - - - - -	5449	9,193,323 – 9,193,440	-	5	118	86.10	-1.80	0.67	0.534550
3397	3R_DroMel_CAF1	9,197,358 – 9,197,448	- - - "knownCDS=Parent=FBtr0082771;Name=Lip3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8823-RA" - - - - -	5450	9,197,358 – 9,197,448	+	6	103	71.15	-1.77	0.41	0.569687
3397	3R_DroMel_CAF1	9,197,358 – 9,197,448		5451	9,197,358 – 9,197,448	-	6	103	71.15	-1.40	0.74	0.964912
3398	3R_DroMel_CAF1	9,202,274 – 9,202,388	- - - - - - - - -	5452	9,202,274 – 9,202,388	+	4	114	89.62	-1.95	0.72	0.682212
3399	3R_DroMel_CAF1	9,202,764 – 9,202,982	- - - - - - - - -	5453	9,202,764 – 9,202,865	+	4	101	80.53	-1.89	0.75	0.870491
				5454	9,202,764 – 9,202,865	-	4	101	80.53	-1.48	0.74	0.521671
				5455	9,202,785 – 9,202,905	+	4	120	81.81	-2.48	0.80	0.987395
				5456	9,202,785 – 9,202,905	-	4	120	81.81	-1.64	0.66	0.566284
				5457	9,202,825 – 9,202,945	+	4	120	84.86	-2.27	0.83	0.960229
				5458	9,202,865 – 9,202,982	+	4	117	91.45	-3.24	0.76	0.915696
				5459	9,202,865 – 9,202,982	-	4	117	91.45	-2.11	0.81	0.868118
3400	3R_DroMel_CAF1	9,204,602 – 9,204,706	- - "RNAmicro=f:9204602_t:9204709_strand:+_p:0.897871" - - - - - -	5460	9,204,602 – 9,204,706	+	5	108	87.78	-1.97	0.89	0.978595
3401	3R_DroMel_CAF1	9,220,864 – 9,220,957	- - - - - - - - -	5461	9,220,864 – 9,220,957	+	6	96	77.80	-2.17	0.55	0.895417
3401	3R_DroMel_CAF1	9,220,864 – 9,220,957	- - - - - - - - -	5462	9,220,864 – 9,220,957	-	6	96	77.80	-1.94	0.56	0.811307
3402	3R_DroMel_CAF1	9,221,392 – 9,221,510	- - - - - - - - -	5463	9,221,392 – 9,221,510	-	5	118	90.93	-1.51	0.83	0.767882
3403	3R_DroMel_CAF1	9,222,519 – 9,222,741	- - - "knownCDS=Parent=FBtr0082761;Name=CG14374-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14374-RA" - - - - -	5464	9,222,519 – 9,222,639	+	5	120	92.83	-1.32	0.86	0.666743
3403	3R_DroMel_CAF1	9,222,519 – 9,222,741		5465	9,222,639 – 9,222,741	-	3	120	85.00	-0.95	0.92	0.554462
3404	3R_DroMel_CAF1	9,223,792 – 9,223,912	- - - "knownCDS=Parent=FBtr0082756;Name=CG14377-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14377-RA" - - - - -	5466	9,223,792 – 9,223,912	-	5	120	91.25	-1.47	0.83	0.746554
3405	3R_DroMel_CAF1	9,230,429 – 9,230,528	- - - "knownCDS=Parent=FBtr0082759;Name=yellow-e3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17045-RA" - - - - -	5467	9,230,429 – 9,230,528	+	6	101	83.48	-1.72	0.70	0.531772
3406	3R_DroMel_CAF1	9,233,627 – 9,233,740	- - - - - - - - -	5468	9,233,627 – 9,233,740	-	5	113	93.27	-1.75	0.81	0.875948
3407	3R_DroMel_CAF1	9,236,075 – 9,236,183	- - - - - - - - -	5469	9,236,075 – 9,236,183	+	6	112	79.43	-1.59	0.59	0.557402
3408	3R_DroMel_CAF1	9,237,224 – 9,237,323	- - - "knownCDS=Parent=FBtr0082757;Name=yellow-e-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9792-RA" - - - - -	5470	9,237,224 – 9,237,323	-	6	99	81.51	-1.44	0.72	0.628591
3409	3R_DroMel_CAF1	9,238,782 – 9,238,903	- - - - - - - - -	5471	9,238,782 – 9,238,872	+	6	95	82.25	-1.87	0.72	0.729681
3409	3R_DroMel_CAF1	9,238,782 – 9,238,903	- - - - - - - - -	5472	9,238,797 – 9,238,903	+	6	106	84.21	-1.83	0.74	0.557193
3410	3R_DroMel_CAF1	9,241,353 – 9,241,446	- - - - - - - - -	5473	9,241,353 – 9,241,446	-	6	96	82.75	-2.43	0.65	0.728306
3411	3R_DroMel_CAF1	9,242,166 – 9,242,266	- - - - - - - - -	5474	9,242,166 – 9,242,266	-	5	100	95.20	-1.38	0.92	0.899897
3412	3R_DroMel_CAF1	9,250,886 – 9,251,056	- - - - - - - - -	5475	9,250,886 – 9,251,002	+	6	116	91.72	-1.64	0.85	0.597973
3412	3R_DroMel_CAF1	9,250,886 – 9,251,056	- - - - - - - - -	5476	9,250,962 – 9,251,056	-	5	100	88.90	-1.93	0.75	0.782509
3413	3R_DroMel_CAF1	9,257,876 – 9,258,022	- - - "knownCDS=Parent=FBtr0082793;Name=yrt-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9764-RA" - - - - -	5477	9,257,876 – 9,257,982	-	6	106	84.34	-1.85	0.83	0.733064
3413	3R_DroMel_CAF1	9,257,876 – 9,258,022		5478	9,257,914 – 9,258,022	-	6	114	74.01	-1.77	0.51	0.747647
3414	3R_DroMel_CAF1	9,270,460 – 9,270,550	- - - - - - - - -	5479	9,270,460 – 9,270,550	+	5	112	74.39	-2.61	0.33	0.996781
3414	3R_DroMel_CAF1	9,270,460 – 9,270,550	- - - - - - - - -	5480	9,270,460 – 9,270,550	-	5	112	74.39	-1.81	0.42	0.647587
3415	3R_DroMel_CAF1	9,271,022 – 9,271,132	- - - - - - - - -	5481	9,271,022 – 9,271,132	-	4	118	82.16	-1.89	0.59	0.543242
3416	3R_DroMel_CAF1	9,289,928 – 9,290,039	- - "RNAmicro=f:9289928_t:9290047_strand:-_p:0.600284" - - - - - -	5482	9,289,928 – 9,290,039	+	6	120	84.20	-1.80	0.88	0.834609
3416	3R_DroMel_CAF1	9,289,928 – 9,290,039		5483	9,289,928 – 9,290,039	-	6	120	84.20	-2.02	0.91	0.929484
3417	3R_DroMel_CAF1	9,293,177 – 9,293,267	- - - - - - - - -	5484	9,293,177 – 9,293,267	+	6	98	88.39	-1.74	0.82	0.532017
3418	3R_DroMel_CAF1	9,293,876 – 9,293,967	- - - - - - - - -	5485	9,293,876 – 9,293,967	-	5	101	81.61	-1.70	0.65	0.582662
3419	3R_DroMel_CAF1	9,294,526 – 9,294,618	- - - - - - - - -	5486	9,294,526 – 9,294,618	+	6	120	65.91	-1.78	0.41	0.801845
3420	3R_DroMel_CAF1	9,296,408 – 9,296,505	- - - - - - - - -	5487	9,296,408 – 9,296,505	-	6	102	78.75	-2.50	0.52	0.914150
3421	3R_DroMel_CAF1	9,297,778 – 9,297,952	- - - - - - - - -	5488	9,297,778 – 9,297,881	-	6	120	82.94	-2.13	0.64	0.603104
3421	3R_DroMel_CAF1	9,297,778 – 9,297,952	- - - - - - - - -	5489	9,297,841 – 9,297,952	+	6	114	82.16	-1.85	0.70	0.708161
3422	3R_DroMel_CAF1	9,300,225 – 9,300,320	- - - - - - - - -	5490	9,300,225 – 9,300,320	-	6	117	78.94	-0.97	0.75	0.544095
3423	3R_DroMel_CAF1	9,300,328 – 9,300,450	- - - - - - - - -	5491	9,300,328 – 9,300,422	+	6	116	80.73	-1.77	0.68	0.778938
3423	3R_DroMel_CAF1	9,300,328 – 9,300,450	- - - - - - - - -	5492	9,300,346 – 9,300,450	+	6	108	82.11	-1.37	0.72	0.546042
3424	3R_DroMel_CAF1	9,302,043 – 9,302,140	- - - - - - - - -	5493	9,302,043 – 9,302,140	+	6	99	82.62	-2.46	0.74	0.854851
3425	3R_DroMel_CAF1	9,302,693 – 9,302,797	- - - - - - - - -	5494	9,302,693 – 9,302,797	+	6	120	79.83	-1.58	0.66	0.726816
3425	3R_DroMel_CAF1	9,302,693 – 9,302,797	- - - - - - - - -	5495	9,302,693 – 9,302,797	-	6	120	79.83	-1.03	0.73	0.500000
3426	3R_DroMel_CAF1	9,302,974 – 9,303,066	- - - - - - - - -	5496	9,302,974 – 9,303,066	-	6	99	82.02	-2.39	0.68	0.829027
3427	3R_DroMel_CAF1	9,303,655 – 9,303,852	- - - - - - - - -	5497	9,303,655 – 9,303,759	+	6	109	81.95	-1.93	0.71	0.759647
				5498	9,303,690 – 9,303,797	+	6	113	79.23	-2.61	0.58	0.949340
				5499	9,303,690 – 9,303,797	-	6	113	79.23	-3.03	0.59	0.977269
				5500	9,303,719 – 9,303,828	-	6	110	79.60	-1.68	0.61	0.680737
				5501	9,303,759 – 9,303,852	+	5	93	81.89	-3.27	0.52	0.984587
				5502	9,303,759 – 9,303,852	-	5	93	81.89	-3.26	0.59	0.991277
3428	3R_DroMel_CAF1	9,304,621 – 9,304,717	- - - - - - - - -	5503	9,304,621 – 9,304,717	+	6	120	75.84	-1.06	0.70	0.654307
3429	3R_DroMel_CAF1	9,305,194 – 9,305,287	- - - - - - - - -	5504	9,305,194 – 9,305,287	+	6	113	81.07	-1.40	0.68	0.576328
3429	3R_DroMel_CAF1	9,305,194 – 9,305,287	- - - - - - - - -	5505	9,305,194 – 9,305,287	-	6	113	81.07	-1.58	0.67	0.658565
3430	3R_DroMel_CAF1	9,307,977 – 9,308,079	- - - - - - - - -	5506	9,307,977 – 9,308,079	-	6	120	81.95	-1.61	0.67	0.592785
3431	3R_DroMel_CAF1	9,311,390 – 9,311,506	- - - - - - - - -	5507	9,311,390 – 9,311,506	-	6	120	86.00	-2.47	0.79	0.759346
3432	3R_DroMel_CAF1	9,312,107 – 9,312,208	- - - - - - - - -	5508	9,312,107 – 9,312,208	+	6	120	82.35	-1.87	0.63	0.561481
3433	3R_DroMel_CAF1	9,314,168 – 9,314,300	- - - - - - - - -	5509	9,314,168 – 9,314,279	-	6	120	81.00	-1.38	0.73	0.645032
3433	3R_DroMel_CAF1	9,314,168 – 9,314,300	- - - - - - - - -	5510	9,314,199 – 9,314,300	-	6	120	79.08	-1.85	0.59	0.760993
3434	3R_DroMel_CAF1	9,320,566 – 9,320,672	- - - - - - - - -	5511	9,320,566 – 9,320,672	+	5	106	92.92	-1.78	0.81	0.884679
3435	3R_DroMel_CAF1	9,321,111 – 9,321,203	- - - - - - - - -	5512	9,321,111 – 9,321,203	+	6	109	85.79	-2.74	0.74	0.671329
3435	3R_DroMel_CAF1	9,321,111 – 9,321,203	- - - - - - - - -	5513	9,321,111 – 9,321,203	-	6	109	85.79	-3.17	0.70	0.665649
3436	3R_DroMel_CAF1	9,322,798 – 9,322,907	- - - - - - - - -	5514	9,322,798 – 9,322,907	+	6	110	81.91	-1.25	0.84	0.547539
3437	3R_DroMel_CAF1	9,325,469 – 9,325,569	- - - - - - - - -	5515	9,325,469 – 9,325,569	-	6	117	84.63	-3.17	0.73	0.828736
3438	3R_DroMel_CAF1	9,326,047 – 9,326,148	- - - - - - - - -	5516	9,326,047 – 9,326,148	+	3	113	83.13	-2.09	0.82	0.896136
3439	3R_DroMel_CAF1	9,329,201 – 9,329,338	- - - - - - - - -	5517	9,329,201 – 9,329,309	+	5	110	89.41	-1.65	0.75	0.597311
3439	3R_DroMel_CAF1	9,329,201 – 9,329,338	- - - - - - - - -	5518	9,329,240 – 9,329,338	+	5	103	86.78	-2.32	0.70	0.852784
3440	3R_DroMel_CAF1	9,329,450 – 9,329,566	- - - - - - - - -	5519	9,329,450 – 9,329,566	+	6	118	80.83	-1.86	0.56	0.500000
3440	3R_DroMel_CAF1	9,329,450 – 9,329,566	- - - - - - - - -	5520	9,329,450 – 9,329,566	-	6	118	80.83	-2.89	0.47	0.805463
3441	3R_DroMel_CAF1	9,330,016 – 9,330,119	- - - - - - - - -	5521	9,330,016 – 9,330,119	+	5	107	80.80	-1.95	0.56	0.629681
3442	3R_DroMel_CAF1	9,333,654 – 9,333,776	- - - - - - - - -	5522	9,333,654 – 9,333,756	+	5	114	71.48	-2.22	0.68	0.996303
				5523	9,333,654 – 9,333,756	-	5	114	71.48	-3.66	0.59	0.999913
				5524	9,333,682 – 9,333,776	+	6	115	80.08	-3.10	0.61	0.966939
				5525	9,333,682 – 9,333,776	-	6	115	80.08	-2.36	0.53	0.788552
3443	3R_DroMel_CAF1	9,334,137 – 9,334,306	- - - - - - - - -	5526	9,334,137 – 9,334,243	-	6	109	76.55	-1.45	0.62	0.684191
				5527	9,334,213 – 9,334,306	+	5	95	89.19	-2.55	0.82	0.993736
				5528	9,334,213 – 9,334,306	-	5	95	89.19	-2.31	0.87	0.995701
3444	3R_DroMel_CAF1	9,334,329 – 9,334,442	- - - - - - - - -	5529	9,334,329 – 9,334,442	+	6	120	95.16	-0.95	0.96	0.788226
3445	3R_DroMel_CAF1	9,335,043 – 9,335,184	- - - - - - - - -	5530	9,335,043 – 9,335,145	+	6	107	77.43	-2.06	0.45	0.566549
3445	3R_DroMel_CAF1	9,335,043 – 9,335,184	- - - - - - - - -	5531	9,335,083 – 9,335,184	+	5	105	80.78	-2.38	0.52	0.869873
3446	3R_DroMel_CAF1	9,336,684 – 9,336,781	- - - - - - - - -	5532	9,336,684 – 9,336,781	+	6	109	81.50	-1.96	0.57	0.528908
3446	3R_DroMel_CAF1	9,336,684 – 9,336,781	- - - - - - - - -	5533	9,336,684 – 9,336,781	-	6	109	81.50	-2.68	0.67	0.900333
3447	3R_DroMel_CAF1	9,337,101 – 9,337,197	- - - - - - - - -	5534	9,337,101 – 9,337,197	+	3	98	77.78	-2.24	0.59	0.898771
3448	3R_DroMel_CAF1	9,339,474 – 9,339,565	- - - - - - - - -	5535	9,339,474 – 9,339,565	-	6	97	83.42	-2.44	0.74	0.793983
3449	3R_DroMel_CAF1	9,342,347 – 9,342,443	- - - "knownCDS=texon3504;Parent=CG_NCBI_GNO_32263488, CG_DGIL_SNO_28364991" - - - - -	5536	9,342,347 – 9,342,443	-	6	96	78.30	-2.15	0.62	0.934791
3450	3R_DroMel_CAF1	9,347,006 – 9,347,105	- - - - - - - - -	5537	9,347,006 – 9,347,105	+	6	120	83.53	-1.73	0.78	0.649185
3451	3R_DroMel_CAF1	9,348,575 – 9,348,671	- - - - - - - - -	5538	9,348,575 – 9,348,671	-	4	114	86.19	-2.60	0.75	0.961238
3452	3R_DroMel_CAF1	9,349,127 – 9,349,217	- - - "knownCDS=Parent=FBtr0082791;Name=CG12538-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12538-RA" - - - - -	5539	9,349,127 – 9,349,217	+	6	119	78.56	-1.59	0.59	0.583786
3452	3R_DroMel_CAF1	9,349,127 – 9,349,217		5540	9,349,127 – 9,349,217	-	6	119	78.56	-1.01	0.77	0.618037
3453	3R_DroMel_CAF1	9,350,775 – 9,350,919	- - - - - - - - -	5541	9,350,775 – 9,350,879	-	5	106	84.64	-1.92	0.63	0.552070
3453	3R_DroMel_CAF1	9,350,775 – 9,350,919	- - - - - - - - -	5542	9,350,799 – 9,350,919	-	6	120	93.63	-2.76	0.85	0.986189
3454	3R_DroMel_CAF1	9,353,493 – 9,353,630	- - - - - - - - -	5543	9,353,493 – 9,353,611	+	5	120	75.11	-1.80	0.37	0.622543
				5544	9,353,533 – 9,353,630	+	4	100	81.80	-2.41	0.57	0.818966
				5545	9,353,533 – 9,353,630	-	4	100	81.80	-2.30	0.63	0.903861
3455	3R_DroMel_CAF1	9,354,144 – 9,354,235	- - - - - - - - -	5546	9,354,144 – 9,354,235	-	4	99	90.74	-1.85	0.89	0.907242
3456	3R_DroMel_CAF1	9,355,627 – 9,355,728	- - - - - - - - -	5547	9,355,627 – 9,355,728	+	5	112	90.54	-1.54	0.75	0.524154
3457	3R_DroMel_CAF1	9,356,575 – 9,356,685	- - - - - - - - -	5548	9,356,575 – 9,356,685	-	6	117	78.20	-1.90	0.65	0.906482
3458	3R_DroMel_CAF1	9,357,972 – 9,358,065	- - - - - - - - -	5549	9,357,972 – 9,358,065	+	6	120	78.12	-2.11	0.70	0.956191
3459	3R_DroMel_CAF1	9,358,916 – 9,359,013	- - - - - - - - -	5550	9,358,916 – 9,359,013	+	5	104	94.76	-1.81	0.82	0.894152
3459	3R_DroMel_CAF1	9,358,916 – 9,359,013	- - - - - - - - -	5551	9,358,916 – 9,359,013	-	5	104	94.76	-2.01	0.94	0.999010
3460	3R_DroMel_CAF1	9,360,366 – 9,360,457	- - - - - - - - -	5552	9,360,366 – 9,360,457	+	6	116	80.27	-1.28	0.79	0.687086
3461	3R_DroMel_CAF1	9,361,233 – 9,361,365	- - - - - - - - -	5553	9,361,233 – 9,361,340	+	6	114	77.61	-1.56	0.56	0.500000
3461	3R_DroMel_CAF1	9,361,233 – 9,361,365	- - - - - - - - -	5554	9,361,260 – 9,361,365	+	6	120	80.93	-1.33	0.70	0.581553
3462	3R_DroMel_CAF1	9,361,764 – 9,361,876	- - - - - - - - -	5555	9,361,764 – 9,361,876	+	6	120	78.48	-2.16	0.68	0.950676
3463	3R_DroMel_CAF1	9,362,822 – 9,362,925	- - - - - - - - -	5556	9,362,822 – 9,362,925	+	6	119	76.19	-1.30	0.65	0.690135
3463	3R_DroMel_CAF1	9,362,822 – 9,362,925	- - - - - - - - -	5557	9,362,822 – 9,362,925	-	6	119	76.19	-2.27	0.59	0.972620
3464	3R_DroMel_CAF1	9,364,883 – 9,364,984	- - - - - - - - -	5558	9,364,883 – 9,364,984	+	6	120	87.66	-1.79	0.86	0.778550
3464	3R_DroMel_CAF1	9,364,883 – 9,364,984	- - - - - - - - -	5559	9,364,883 – 9,364,984	-	6	120	87.66	-1.74	0.95	0.964131
3465	3R_DroMel_CAF1	9,365,005 – 9,365,099	- - - - - - - - -	5560	9,365,005 – 9,365,099	-	3	94	97.87	-2.05	0.99	0.914354
3466	3R_DroMel_CAF1	9,365,136 – 9,365,226	- - - - - - - - -	5561	9,365,136 – 9,365,226	-	6	106	85.14	-2.67	0.82	0.914099
3467	3R_DroMel_CAF1	9,367,055 – 9,367,148	- - - - - - - - -	5562	9,367,055 – 9,367,148	+	5	93	89.87	-1.96	0.82	0.953493
3467	3R_DroMel_CAF1	9,367,055 – 9,367,148	- - - - - - - - -	5563	9,367,055 – 9,367,148	-	5	93	89.87	-3.09	0.82	0.998437
3468	3R_DroMel_CAF1	9,367,502 – 9,367,597	- - - - - - - - -	5564	9,367,502 – 9,367,597	-	6	102	88.70	-2.17	0.86	0.897659
3469	3R_DroMel_CAF1	9,368,370 – 9,368,597	- - - - - - - - -	5565	9,368,370 – 9,368,469	-	5	99	96.16	-1.16	0.93	0.625567
				5566	9,368,410 – 9,368,505	+	5	95	99.58	-2.45	1.00	0.999068
				5567	9,368,410 – 9,368,505	-	5	95	99.58	-2.27	1.00	0.998151
				5568	9,368,450 – 9,368,545	+	5	95	99.58	-1.52	1.00	0.902806
				5569	9,368,450 – 9,368,545	-	5	95	99.58	-2.79	1.00	0.999622
				5570	9,368,469 – 9,368,575	+	3	106	100.00	-1.91	1.00	0.877354
				5571	9,368,469 – 9,368,575	-	3	106	100.00	-2.64	1.00	0.978065
				5572	9,368,505 – 9,368,597	+	3	92	100.00	-1.88	1.00	0.866091
				5573	9,368,505 – 9,368,597	-	3	92	100.00	-1.67	1.00	0.774607
3470	3R_DroMel_CAF1	9,374,219 – 9,374,346	- - - - - - - - -	5574	9,374,219 – 9,374,319	-	6	108	81.69	-3.14	0.70	0.934603
				5575	9,374,244 – 9,374,346	+	6	115	76.22	-1.42	0.62	0.664368
				5576	9,374,244 – 9,374,346	-	6	115	76.22	-1.08	0.71	0.703418
3471	3R_DroMel_CAF1	9,376,620 – 9,376,781	- - - - - - - - -	5577	9,376,620 – 9,376,725	+	6	109	80.68	-2.18	0.57	0.742391
				5578	9,376,620 – 9,376,725	-	6	109	80.68	-2.22	0.62	0.837526
				5579	9,376,655 – 9,376,751	+	4	100	89.72	-2.03	0.75	0.786401
				5580	9,376,655 – 9,376,751	-	4	100	89.72	-3.21	0.68	0.794563
				5581	9,376,687 – 9,376,781	+	5	110	83.26	-3.51	0.55	0.979003
				5582	9,376,687 – 9,376,781	-	5	110	83.26	-3.55	0.48	0.961130
3472	3R_DroMel_CAF1	9,378,274 – 9,378,368	- - - - - - - - -	5583	9,378,274 – 9,378,368	-	6	94	80.28	-1.12	0.74	0.552041
3473	3R_DroMel_CAF1	9,378,484 – 9,378,593	- - - - - - - - -	5584	9,378,484 – 9,378,593	+	6	120	87.50	-1.92	0.86	0.813528
3474	3R_DroMel_CAF1	9,379,226 – 9,379,459	- - - - - - - - -	5585	9,379,226 – 9,379,324	+	3	103	78.04	-2.41	0.73	0.994097
				5586	9,379,226 – 9,379,324	-	3	103	78.04	-2.51	0.71	0.995707
				5587	9,379,324 – 9,379,422	+	6	120	81.04	-1.51	0.67	0.626845
				5588	9,379,324 – 9,379,422	-	6	120	81.04	-1.73	0.70	0.762444
				5589	9,379,344 – 9,379,459	-	5	118	94.45	-1.40	0.89	0.868733
3475	3R_DroMel_CAF1	9,394,617 – 9,394,713	- - - - - - - - -	5590	9,394,617 – 9,394,713	+	5	115	78.14	-2.08	0.63	0.928975
3476	3R_DroMel_CAF1	9,395,156 – 9,395,270	- - - - - - - - -	5591	9,395,156 – 9,395,270	+	6	120	91.93	-1.76	0.87	0.835717
3476	3R_DroMel_CAF1	9,395,156 – 9,395,270	- - - - - - - - -	5592	9,395,156 – 9,395,270	-	6	120	91.93	-1.36	0.89	0.723271
3477	3R_DroMel_CAF1	9,401,263 – 9,401,353	- - - - - - - - -	5593	9,401,263 – 9,401,353	+	4	90	90.19	-2.19	0.67	0.545162
3477	3R_DroMel_CAF1	9,401,263 – 9,401,353	- - - - - - - - -	5594	9,401,263 – 9,401,353	-	4	90	90.19	-1.72	0.79	0.705467
3478	3R_DroMel_CAF1	9,406,538 – 9,406,638	- - - - - - - - -	5595	9,406,538 – 9,406,638	+	3	100	83.33	-2.43	0.60	0.644224
3479	3R_DroMel_CAF1	9,408,373 – 9,408,480	- - - - - - - - -	5596	9,408,373 – 9,408,480	+	6	108	76.27	-2.34	0.57	0.973936
3480	3R_DroMel_CAF1	9,409,019 – 9,409,131	- - - - - - - - -	5597	9,409,019 – 9,409,131	+	4	112	81.44	-1.49	0.83	0.621980
3480	3R_DroMel_CAF1	9,409,019 – 9,409,131	- - - - - - - - -	5598	9,409,019 – 9,409,131	-	4	112	81.44	-1.52	0.77	0.584643
3481	3R_DroMel_CAF1	9,409,206 – 9,409,318	- - - - - - - - -	5599	9,409,206 – 9,409,318	-	6	117	83.57	-1.85	0.67	0.508004
3482	3R_DroMel_CAF1	9,409,492 – 9,409,587	- - - - - - - - -	5600	9,409,492 – 9,409,587	+	4	95	79.47	-1.50	0.72	0.524667
3483	3R_DroMel_CAF1	9,411,314 – 9,411,425	- - - - - - - - -	5601	9,411,314 – 9,411,425	+	4	120	93.22	-2.38	0.87	0.956529
3484	3R_DroMel_CAF1	9,413,360 – 9,413,456	- - - - - - - - -	5602	9,413,360 – 9,413,456	-	5	113	79.45	-2.01	0.48	0.633821
3485	3R_DroMel_CAF1	9,417,250 – 9,417,348	- - - - - - - - -	5603	9,417,250 – 9,417,348	-	5	103	81.70	-1.83	0.73	0.797443
3486	3R_DroMel_CAF1	9,418,505 – 9,418,601	- - - - - - - - -	5604	9,418,505 – 9,418,601	+	6	102	75.71	-1.79	0.52	0.703813
3487	3R_DroMel_CAF1	9,419,694 – 9,419,801	- - - - - - - - -	5605	9,419,694 – 9,419,801	-	6	120	81.09	-1.86	0.65	0.730110
3488	3R_DroMel_CAF1	9,424,110 – 9,424,200	- - - - - - - - -	5606	9,424,110 – 9,424,200	-	3	104	88.59	-1.72	0.91	0.768486
3489	3R_DroMel_CAF1	9,425,108 – 9,425,207	- - - - - - - - -	5607	9,425,108 – 9,425,207	+	4	116	71.41	-1.82	0.50	0.612972
3490	3R_DroMel_CAF1	9,425,395 – 9,425,491	- - - - - - - - -	5608	9,425,395 – 9,425,491	+	6	96	81.13	-2.08	0.80	0.900170
3490	3R_DroMel_CAF1	9,425,395 – 9,425,491	- - - - - - - - -	5609	9,425,395 – 9,425,491	-	6	96	81.13	-1.57	0.68	0.661658
3491	3R_DroMel_CAF1	9,429,461 – 9,429,554	- - - - - - - - -	5610	9,429,461 – 9,429,554	+	6	95	79.17	-1.86	0.64	0.850759
3491	3R_DroMel_CAF1	9,429,461 – 9,429,554	- - - - - - - - -	5611	9,429,461 – 9,429,554	-	6	95	79.17	-1.45	0.67	0.713473
3492	3R_DroMel_CAF1	9,430,314 – 9,430,409	- - - - - - - - -	5612	9,430,314 – 9,430,409	-	6	120	74.30	-2.10	0.53	0.953516
3493	3R_DroMel_CAF1	9,438,007 – 9,438,109	- - - "knownCDS=Parent=FBtr0082860;Name=CG9757-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9757-RA" - - - - -	5613	9,438,007 – 9,438,109	+	6	105	89.00	-3.47	0.82	0.979027
3493	3R_DroMel_CAF1	9,438,007 – 9,438,109		5614	9,438,007 – 9,438,109	-	6	105	89.00	-4.07	0.90	0.999248
3494	3R_DroMel_CAF1	9,438,722 – 9,438,815	- - - - - - - - -	5615	9,438,722 – 9,438,815	-	6	111	79.25	-1.90	0.53	0.550758
3495	3R_DroMel_CAF1	9,440,829 – 9,440,947	- - - - - - - - -	5616	9,440,829 – 9,440,947	-	5	118	80.93	-1.91	0.62	0.727073
3496	3R_DroMel_CAF1	9,443,253 – 9,443,402	- - - - - - - - -	5617	9,443,253 – 9,443,362	+	5	109	97.80	-3.55	0.95	0.999915
				5618	9,443,253 – 9,443,362	-	5	109	97.80	-1.89	0.93	0.989995
				5619	9,443,282 – 9,443,402	-	5	120	95.67	-1.65	0.86	0.916802
3497	3R_DroMel_CAF1	9,445,442 – 9,445,541	- - - - - - - - -	5620	9,445,442 – 9,445,541	+	5	99	93.93	-1.52	0.82	0.696005
3498	3R_DroMel_CAF1	9,448,670 – 9,448,767	- - - - - - - - -	5621	9,448,670 – 9,448,767	-	6	108	77.49	-1.83	0.59	0.831673
3499	3R_DroMel_CAF1	9,451,177 – 9,451,286	- - - "knownCDS=Parent=FBtr0082859;Name=CG14368-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14368-RA" - - - - -	5622	9,451,177 – 9,451,286	-	6	120	85.90	-2.68	0.82	0.900430
3500	3R_DroMel_CAF1	9,451,467 – 9,451,586	- - - - - - - - -	5623	9,451,467 – 9,451,586	-	4	120	92.05	-1.96	0.75	0.623294
3501	3R_DroMel_CAF1	9,453,399 – 9,453,498	- - - - - - - - -	5624	9,453,399 – 9,453,498	-	5	120	81.97	-2.60	0.64	0.961182
3502	3R_DroMel_CAF1	9,454,178 – 9,454,275	- - - - - - - - -	5625	9,454,178 – 9,454,275	-	6	103	77.09	-2.19	0.52	0.904055
3503	3R_DroMel_CAF1	9,454,381 – 9,454,498	- - - - - - - - -	5626	9,454,381 – 9,454,487	-	6	108	85.32	-2.15	0.73	0.500000
3503	3R_DroMel_CAF1	9,454,381 – 9,454,498	- - - - - - - - -	5627	9,454,407 – 9,454,498	-	6	91	82.67	-1.80	0.64	0.536251
3504	3R_DroMel_CAF1	9,455,231 – 9,455,341	- - - - - - - - -	5628	9,455,231 – 9,455,341	+	6	118	80.50	-2.01	0.70	0.867617
3505	3R_DroMel_CAF1	9,456,024 – 9,456,121	- - - - - - - - -	5629	9,456,024 – 9,456,121	+	6	100	82.41	-2.04	0.67	0.698640
3506	3R_DroMel_CAF1	9,473,138 – 9,473,228	- - - - - - - - -	5630	9,473,138 – 9,473,228	+	6	91	86.12	-1.65	0.83	0.564788
3507	3R_DroMel_CAF1	9,480,952 – 9,481,128	- - - "knownCDS=Parent=FBtr0082853;Name=Rbp4-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9654-RA" - - - - -	5631	9,480,952 – 9,481,054	+	6	105	82.27	-1.92	0.72	0.746962
				5632	9,480,952 – 9,481,054	-	6	105	82.27	-2.87	0.71	0.898327
				5633	9,480,978 – 9,481,088	+	6	110	79.94	-1.27	0.67	0.548244
				5634	9,480,978 – 9,481,088	-	6	110	79.94	-2.18	0.54	0.748958
				5635	9,481,018 – 9,481,128	+	6	110	77.76	-1.31	0.71	0.786759
3508	3R_DroMel_CAF1	9,481,162 – 9,481,273	- - - - - - - - -	5636	9,481,162 – 9,481,273	-	3	111	81.35	-1.51	0.83	0.727450
3509	3R_DroMel_CAF1	9,489,658 – 9,489,748	- - - - - - - - -	5637	9,489,658 – 9,489,748	+	6	101	92.94	-2.79	0.95	0.999886
3509	3R_DroMel_CAF1	9,489,658 – 9,489,748	- - - - - - - - -	5638	9,489,658 – 9,489,748	-	6	101	92.94	-1.24	0.91	0.737031
3510	3R_DroMel_CAF1	9,491,868 – 9,491,982	- - - "knownCDS=Parent=FBtr0082807, FBtr0100261;Name=B52-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10851-RG, FlyBase+Annotation+IDs:CG10851-RH" - - - - -	5639	9,491,868 – 9,491,982	-	6	120	77.39	-1.94	0.52	0.739497
3511	3R_DroMel_CAF1	9,497,762 – 9,497,858	- - - - - - - - -	5640	9,497,762 – 9,497,858	-	6	120	78.00	-2.67	0.79	0.978048
3512	3R_DroMel_CAF1	9,500,250 – 9,500,405	- - - - - - - - -	5641	9,500,250 – 9,500,366	+	5	116	97.16	-1.87	0.91	0.985229
3512	3R_DroMel_CAF1	9,500,250 – 9,500,405	- - - - - - - - -	5642	9,500,290 – 9,500,405	+	5	116	94.89	-1.28	0.87	0.646475
3513	3R_DroMel_CAF1	9,502,560 – 9,502,701	- - - - - - - - -	5643	9,502,560 – 9,502,662	-	5	102	97.84	-2.11	0.92	0.996044
3513	3R_DroMel_CAF1	9,502,560 – 9,502,701	- - - - - - - - -	5644	9,502,595 – 9,502,701	-	6	110	83.85	-2.44	0.64	0.555167
3514	3R_DroMel_CAF1	9,504,460 – 9,504,568	- - - "knownCDS=Parent=FBtr0082808, FBtr0082809, FBtr0082810;Name=lkb1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9374-RA, FlyBase+Annotation+IDs:CG9374-RB, FlyBase+Annotation+IDs:CG9374-RC" - - - - -	5645	9,504,460 – 9,504,568	-	6	112	86.47	-1.70	0.84	0.618714
3515	3R_DroMel_CAF1	9,507,469 – 9,507,562	- - - - - - - - -	5646	9,507,469 – 9,507,562	+	6	109	74.15	-1.24	0.64	0.649455
3516	3R_DroMel_CAF1	9,508,900 – 9,509,020	- - - - - - - - -	5647	9,508,900 – 9,509,020	-	5	120	86.33	-1.56	0.73	0.513949
3517	3R_DroMel_CAF1	9,509,590 – 9,509,722	- - - - - - - - -	5648	9,509,590 – 9,509,708	-	5	118	94.92	-2.29	0.91	0.999337
				5649	9,509,630 – 9,509,722	+	5	92	95.00	-1.47	0.92	0.941946
				5650	9,509,630 – 9,509,722	-	5	92	95.00	-1.88	0.89	0.989279
3518	3R_DroMel_CAF1	9,510,393 – 9,510,509	- - - - - - - - -	5651	9,510,393 – 9,510,509	+	5	120	92.38	-2.48	0.86	0.998515
3519	3R_DroMel_CAF1	9,510,524 – 9,510,715	- - - - - - - - -	5652	9,510,524 – 9,510,638	-	5	114	98.86	-1.49	0.98	0.916521
				5653	9,510,598 – 9,510,715	+	5	119	90.88	-2.15	0.87	0.994588
				5654	9,510,598 – 9,510,715	-	5	119	90.88	-2.13	0.84	0.987729
3520	3R_DroMel_CAF1	9,510,839 – 9,511,199	- - - - - - - - -	5655	9,510,839 – 9,510,959	-	5	120	95.39	-1.55	0.84	0.784608
				5656	9,510,919 – 9,511,039	-	5	120	92.55	-2.72	0.82	0.996957
				5657	9,511,039 – 9,511,159	-	5	120	90.75	-1.59	0.75	0.521415
				5658	9,511,079 – 9,511,199	-	5	120	92.75	-1.64	0.82	0.856595
3521	3R_DroMel_CAF1	9,512,425 – 9,512,623	- - - - - - - - -	5659	9,512,425 – 9,512,545	+	5	120	96.00	-1.70	0.91	0.981686
				5660	9,512,425 – 9,512,545	-	5	120	96.00	-3.27	0.92	0.999933
				5661	9,512,465 – 9,512,585	-	5	120	84.65	-2.75	0.71	0.968559
				5662	9,512,505 – 9,512,623	-	5	120	80.86	-2.38	0.63	0.945389
3522	3R_DroMel_CAF1	9,513,361 – 9,513,478	- - - - - - - - -	5663	9,513,361 – 9,513,478	-	5	117	97.78	-1.14	1.01	0.681878
3523	3R_DroMel_CAF1	9,515,724 – 9,515,844	- - - "knownCDS=Parent=FBtr0082817;Name=flfl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9351-RB" - - - - -	5664	9,515,724 – 9,515,844	+	6	120	89.22	-2.32	0.84	0.887907
3524	3R_DroMel_CAF1	9,520,688 – 9,520,802	- - - "knownCDS=Parent=FBtr0082819;Name=CG14367-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14367-RA" - - - - -	5665	9,520,688 – 9,520,802	+	6	114	83.10	-1.91	0.64	0.505133
3525	3R_DroMel_CAF1	9,523,622 – 9,523,803	- - "RNAmicro=f:9523622_t:9523741_strand:-_p:0.997306" "knownCDS=Parent=FBtr0082846, FBtr0082847;Name=CG9611-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9611-RA, FlyBase+Annotation+IDs:CG9611-RB" - - - - -	5666	9,523,622 – 9,523,742	+	6	120	79.56	-3.67	0.61	0.986015
				5667	9,523,622 – 9,523,742	-	6	120	79.56	-3.65	0.65	0.983432
				5668	9,523,702 – 9,523,803	-	6	106	81.69	-1.61	0.70	0.658931
3526	3R_DroMel_CAF1	9,525,992 – 9,526,083	- - - - - - - - -	5669	9,525,992 – 9,526,083	+	6	106	75.32	-1.01	0.72	0.707152
3526	3R_DroMel_CAF1	9,525,992 – 9,526,083	- - - - - - - - -	5670	9,525,992 – 9,526,083	-	6	106	75.32	-1.62	0.56	0.691713
3527	3R_DroMel_CAF1	9,536,959 – 9,537,073	- - - "knownCDS=Parent=FBtr0091745, FBtr0091746;Name=primo-2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33747-RB, FlyBase+Annotation+IDs:CG33747-RC" - - - - -	5671	9,536,959 – 9,537,073	+	6	114	76.49	-1.92	0.66	0.951683
3528	3R_DroMel_CAF1	9,537,617 – 9,537,736	- - - - - - - - -	5672	9,537,617 – 9,537,736	+	3	119	84.59	-2.60	0.78	0.928645
3529	3R_DroMel_CAF1	9,545,106 – 9,545,197	- - - - - - - - -	5673	9,545,106 – 9,545,197	+	6	93	83.33	-2.69	0.69	0.785376
3530	3R_DroMel_CAF1	9,545,667 – 9,545,759	- - - - - - - - -	5674	9,545,667 – 9,545,759	+	6	96	79.20	-1.64	0.66	0.792641
3531	3R_DroMel_CAF1	9,551,014 – 9,551,109	- - - - - - - - -	5675	9,551,014 – 9,551,109	-	4	95	77.44	-3.10	0.72	0.999758
3532	3R_DroMel_CAF1	9,551,243 – 9,551,335	- - - - - - - - -	5676	9,551,243 – 9,551,335	+	6	92	82.39	-2.01	0.73	0.763698
3533	3R_DroMel_CAF1	9,551,615 – 9,551,740	- - - - - - - - -	5677	9,551,615 – 9,551,715	+	6	101	85.96	-2.79	0.71	0.569812
				5678	9,551,615 – 9,551,715	-	6	101	85.96	-2.79	0.75	0.706657
				5679	9,551,642 – 9,551,740	+	6	99	78.48	-2.06	0.54	0.803916
				5680	9,551,642 – 9,551,740	-	6	99	78.48	-3.73	0.75	0.979465
3534	3R_DroMel_CAF1	9,554,996 – 9,555,088	- - - - - - - - -	5681	9,554,996 – 9,555,088	+	6	96	74.10	-2.45	0.36	0.926701
3535	3R_DroMel_CAF1	9,555,649 – 9,555,749	- - - - - - - - -	5682	9,555,649 – 9,555,749	+	6	115	76.85	-1.60	0.55	0.542424
3536	3R_DroMel_CAF1	9,557,472 – 9,557,607	- - - - - - - - -	5683	9,557,472 – 9,557,575	+	4	105	88.85	-2.90	0.72	0.917947
				5684	9,557,472 – 9,557,575	-	4	105	88.85	-1.73	0.68	0.521515
				5685	9,557,507 – 9,557,607	+	4	104	89.92	-2.99	0.80	0.974473
				5686	9,557,507 – 9,557,607	-	4	104	89.92	-2.51	0.76	0.909344
3537	3R_DroMel_CAF1	9,557,722 – 9,557,816	- - - - - - - - -	5687	9,557,722 – 9,557,816	+	5	105	70.56	-2.10	0.51	0.974561
3537	3R_DroMel_CAF1	9,557,722 – 9,557,816	- - - - - - - - -	5688	9,557,722 – 9,557,816	-	5	105	70.56	-1.74	0.41	0.620571
3538	3R_DroMel_CAF1	9,558,742 – 9,558,843	- - - - - - - - -	5689	9,558,742 – 9,558,843	-	6	106	82.26	-2.17	0.66	0.738836
3539	3R_DroMel_CAF1	9,571,367 – 9,571,502	- - - "knownCDS=Parent=FBtr0082822;Name=CG14366-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14366-RA" - - - - -	5690	9,571,367 – 9,571,481	-	6	120	80.84	-2.19	0.70	0.885721
3539	3R_DroMel_CAF1	9,571,367 – 9,571,502		5691	9,571,407 – 9,571,502	-	6	114	75.97	-2.18	0.66	0.979790
3540	3R_DroMel_CAF1	9,579,217 – 9,579,325	- - - "knownCDS=Parent=FBtr0082823;Name=CG14365-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14365-RA" - - - - -	5692	9,579,217 – 9,579,325	-	6	117	76.70	-2.78	0.54	0.989042
3541	3R_DroMel_CAF1	9,579,893 – 9,579,987	- - - "knownCDS=Parent=FBtr0082823;Name=CG14365-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14365-RA" - - - - -	5693	9,579,893 – 9,579,987	+	6	94	79.70	-1.50	0.70	0.751647
3542	3R_DroMel_CAF1	9,586,699 – 9,586,799	- - - - - - - - -	5694	9,586,699 – 9,586,799	+	5	100	94.70	-1.19	0.89	0.598436
3543	3R_DroMel_CAF1	9,588,678 – 9,588,777	- - - - - - - - -	5695	9,588,678 – 9,588,777	-	3	99	93.56	-2.26	0.79	0.534515
3544	3R_DroMel_CAF1	9,590,741 – 9,590,880	- - - - - - - - -	5696	9,590,741 – 9,590,840	-	5	100	90.03	-1.40	0.86	0.709948
3544	3R_DroMel_CAF1	9,590,741 – 9,590,880	- - - - - - - - -	5697	9,590,778 – 9,590,880	-	5	103	70.30	-1.78	0.60	0.934729
3545	3R_DroMel_CAF1	9,593,113 – 9,593,224	- - - - - - - - -	5698	9,593,113 – 9,593,224	-	5	120	70.77	-1.73	0.41	0.600114
3546	3R_DroMel_CAF1	9,595,405 – 9,595,519	- - - "knownCDS=Parent=FBtr0082826;Name=CG9307-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9307-RA" - - - - -	5699	9,595,405 – 9,595,519	-	6	114	81.35	-1.86	0.62	0.644975
3547	3R_DroMel_CAF1	9,597,487 – 9,597,632	- - "RNAmicro=f:9597527_t:9597641_strand:-_p:0.617123" - - - - - -	5700	9,597,487 – 9,597,606	+	6	120	82.28	-2.39	0.91	0.966378
				5701	9,597,527 – 9,597,632	+	6	115	82.68	-4.09	0.90	0.987301
				5702	9,597,527 – 9,597,632	-	6	115	82.68	-1.82	0.81	0.775397
3548	3R_DroMel_CAF1	9,598,042 – 9,598,143	- - - "knownCDS=Parent=FBtr0082827, FBtr0082828;Name=CG9297-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9297-RA, FlyBase+Annotation+IDs:CG9297-RB" - - - - -	5703	9,598,042 – 9,598,143	+	6	120	81.55	-1.71	0.77	0.772234
3549	3R_DroMel_CAF1	9,602,604 – 9,602,697	- - - "knownCDS=Parent=FBtr0082827, FBtr0082828;Name=CG9297-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9297-RA, FlyBase+Annotation+IDs:CG9297-RB" - - - - -	5704	9,602,604 – 9,602,697	+	6	110	77.83	-1.23	0.80	0.823666
3550	3R_DroMel_CAF1	9,607,970 – 9,608,080	- - - - - - - - -	5705	9,607,970 – 9,608,080	+	6	114	86.34	-2.06	0.84	0.798228
3551	3R_DroMel_CAF1	9,614,171 – 9,614,272	- - - - - - - - -	5706	9,614,171 – 9,614,272	-	6	107	80.64	-1.18	0.77	0.587114
3552	3R_DroMel_CAF1	9,619,045 – 9,619,151	- - - - - - - - -	5707	9,619,045 – 9,619,151	-	6	106	81.32	-1.22	0.84	0.566079
3553	3R_DroMel_CAF1	9,623,659 – 9,623,749	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000215;Name=Dmel_Phe_GAA_14000215;TFAMID=DmelFGAA-9623675" "tRNAscan=type:Phe:anticodon:GAA f:9623674_t:9623761_strand=+_cove=82.98" - - "Rfam=BX004780.4/38540-38612_RF00005;tRNA;\|1e-30" - - - "Flybase=FBgn0011857:transfer_RNA:phe2:56EF:cytosolic_tRNA_gene\|2e-37"	5708	9,623,659 – 9,623,749	-	6	110	80.87	-2.42	0.93	0.973087
3554	3R_DroMel_CAF1	9,623,920 – 9,624,027	"known=exon_Parent=Dmel\CR_TRNA_ATT_14000216" "tRNAscan=type:Phe:anticodon:GAA f:9623920_t:9623991_strand=-_cove=74.48" - - "Rfam=BX004780.4/38540-38612_RF00005;tRNA;\|5e-30" - - - "Flybase=FBgn0011857:transfer_RNA:phe2:56EF:cytosolic_tRNA_gene\|1e-36"	5709	9,623,920 – 9,624,027	+	5	107	95.23	-1.16	0.90	0.576989
3555	3R_DroMel_CAF1	9,624,812 – 9,624,913	- - - - - - - - -	5710	9,624,812 – 9,624,913	+	6	103	88.20	-4.30	0.80	0.987356
3555	3R_DroMel_CAF1	9,624,812 – 9,624,913	- - - - - - - - -	5711	9,624,812 – 9,624,913	-	6	103	88.20	-2.29	0.78	0.564653
3556	3R_DroMel_CAF1	9,628,163 – 9,628,264	- - - - - - - - -	5712	9,628,163 – 9,628,264	+	6	102	86.85	-3.10	0.82	0.944802
3556	3R_DroMel_CAF1	9,628,163 – 9,628,264	- - - - - - - - -	5713	9,628,163 – 9,628,264	-	6	102	86.85	-2.30	0.82	0.803867
3557	3R_DroMel_CAF1	9,631,672 – 9,631,767	- - - - - - - - -	5714	9,631,672 – 9,631,767	-	6	110	81.94	-1.91	0.60	0.547089
3558	3R_DroMel_CAF1	9,636,564 – 9,636,655	- - - - - - - - -	5715	9,636,564 – 9,636,655	+	6	91	94.36	-1.93	0.94	0.996952
3559	3R_DroMel_CAF1	9,639,599 – 9,639,711	- - - - - - - - -	5716	9,639,599 – 9,639,711	+	6	112	80.89	-2.43	0.65	0.892501
3560	3R_DroMel_CAF1	9,639,761 – 9,639,864	- - - - - - - - -	5717	9,639,761 – 9,639,864	+	6	104	84.49	-2.01	0.72	0.549185
3561	3R_DroMel_CAF1	9,642,251 – 9,642,342	- - - - - - - - -	5718	9,642,251 – 9,642,342	+	5	99	85.74	-1.74	0.68	0.543642
3562	3R_DroMel_CAF1	9,644,742 – 9,644,845	- - - - - - - - -	5719	9,644,742 – 9,644,845	+	6	119	76.55	-1.98	0.54	0.863807
3562	3R_DroMel_CAF1	9,644,742 – 9,644,845	- - - - - - - - -	5720	9,644,742 – 9,644,845	-	6	119	76.55	-2.17	0.46	0.807862
3563	3R_DroMel_CAF1	9,648,416 – 9,648,525	- - - - - - - - -	5721	9,648,416 – 9,648,525	+	4	119	82.77	-2.29	0.57	0.704052
3564	3R_DroMel_CAF1	9,656,670 – 9,656,867	- - - - - - - - -	5722	9,656,670 – 9,656,763	+	6	103	83.38	-2.20	0.66	0.607146
				5723	9,656,696 – 9,656,799	+	6	120	78.05	-1.95	0.52	0.684680
				5724	9,656,734 – 9,656,834	+	6	116	79.08	-2.30	0.75	0.956910
				5725	9,656,734 – 9,656,834	-	6	116	79.08	-2.56	0.55	0.937187
				5726	9,656,763 – 9,656,867	+	6	105	81.53	-2.75	0.79	0.939604
				5727	9,656,763 – 9,656,867	-	6	105	81.53	-2.21	0.71	0.856949
3565	3R_DroMel_CAF1	9,667,184 – 9,667,325	- - - - - - - - -	5728	9,667,184 – 9,667,299	-	5	120	96.62	-1.19	1.01	0.841692
3565	3R_DroMel_CAF1	9,667,184 – 9,667,325	- - - - - - - - -	5729	9,667,224 – 9,667,325	-	5	120	88.95	-2.01	0.90	0.990207
3566	3R_DroMel_CAF1	9,667,596 – 9,667,704	- - - - - - - - -	5730	9,667,596 – 9,667,704	-	4	119	86.34	-1.82	0.62	0.500000
3567	3R_DroMel_CAF1	9,667,925 – 9,668,045	- - - - - - - - -	5731	9,667,925 – 9,668,045	+	5	120	98.17	-1.36	0.98	0.870796
3567	3R_DroMel_CAF1	9,667,925 – 9,668,045	- - - - - - - - -	5732	9,667,925 – 9,668,045	-	5	120	98.17	-1.93	0.94	0.992210
3568	3R_DroMel_CAF1	9,668,827 – 9,668,987	- - - - - - - - -	5733	9,668,827 – 9,668,947	-	5	120	95.39	-1.23	0.97	0.862921
3568	3R_DroMel_CAF1	9,668,827 – 9,668,987	- - - - - - - - -	5734	9,668,867 – 9,668,987	-	5	120	95.39	-2.19	0.91	0.998817
3569	3R_DroMel_CAF1	9,669,251 – 9,669,353	- - - - - - - - -	5735	9,669,251 – 9,669,353	+	5	120	86.46	-1.68	0.76	0.655261
3570	3R_DroMel_CAF1	9,669,623 – 9,669,841	- - "RNAmicro=f:9669623_t:9669742_strand:+_p:0.712630" - - - - - -	5736	9,669,623 – 9,669,730	+	4	120	86.64	-1.88	0.93	0.941239
				5737	9,669,623 – 9,669,730	-	4	120	86.64	-1.53	0.89	0.713038
				5738	9,669,730 – 9,669,841	-	5	120	82.52	-1.76	0.69	0.655024
3571	3R_DroMel_CAF1	9,670,187 – 9,670,297	- - - - - - - - -	5739	9,670,187 – 9,670,297	+	5	120	91.04	-2.46	0.72	0.823141
3572	3R_DroMel_CAF1	9,670,823 – 9,671,004	- - - - - - - - -	5740	9,670,823 – 9,670,942	-	5	120	96.24	-1.90	0.83	0.894205
				5741	9,670,862 – 9,670,982	+	5	120	89.72	-3.05	0.93	0.999954
				5742	9,670,862 – 9,670,982	-	5	120	89.72	-2.22	0.85	0.990858
				5743	9,670,902 – 9,671,004	+	4	120	76.39	-2.04	0.86	0.990772
				5744	9,670,902 – 9,671,004	-	4	120	76.39	-1.92	0.71	0.947176
3573	3R_DroMel_CAF1	9,671,250 – 9,671,361	- - - - - - - - -	5745	9,671,250 – 9,671,361	-	5	120	76.27	1.19	0.96	0.655406
3574	3R_DroMel_CAF1	9,672,467 – 9,672,610	- - - - - - - - -	5746	9,672,467 – 9,672,586	+	5	120	78.44	-1.73	0.65	0.746320
				5747	9,672,467 – 9,672,586	-	5	120	78.44	-2.04	0.52	0.789747
				5748	9,672,507 – 9,672,610	-	3	104	96.79	-1.88	0.87	0.517881
3575	3R_DroMel_CAF1	9,672,779 – 9,672,959	- - - - - - - - -	5749	9,672,779 – 9,672,880	-	5	120	86.83	-2.27	0.82	0.974201
				5750	9,672,819 – 9,672,919	-	5	120	87.33	-1.94	0.87	0.962637
				5751	9,672,849 – 9,672,959	+	5	120	93.53	-1.40	0.84	0.684125
				5752	9,672,849 – 9,672,959	-	5	120	93.53	-2.01	0.84	0.981239
3576	3R_DroMel_CAF1	9,673,398 – 9,673,613	- - - - - - - - -	5753	9,673,398 – 9,673,511	-	3	115	95.36	-1.45	0.97	0.569806
				5754	9,673,431 – 9,673,551	+	5	120	92.83	-2.08	0.75	0.762242
				5755	9,673,431 – 9,673,551	-	5	120	92.83	-2.34	0.81	0.982408
				5756	9,673,471 – 9,673,591	+	5	120	97.67	-2.19	0.87	0.986891
				5757	9,673,471 – 9,673,591	-	5	120	97.67	-1.47	0.93	0.901808
				5758	9,673,511 – 9,673,613	+	3	102	97.39	-2.44	0.93	0.916574
3577	3R_DroMel_CAF1	9,673,730 – 9,673,850	- - - - - - - - -	5759	9,673,730 – 9,673,850	+	5	120	89.58	-2.04	0.71	0.646764
3577	3R_DroMel_CAF1	9,673,730 – 9,673,850	- - - - - - - - -	5760	9,673,730 – 9,673,850	-	5	120	89.58	-1.97	0.72	0.671699
3578	3R_DroMel_CAF1	9,673,930 – 9,674,077	- - - - - - - - -	5761	9,673,930 – 9,674,050	+	5	120	92.49	-1.84	0.77	0.769127
				5762	9,673,970 – 9,674,077	+	4	120	81.11	-1.92	0.61	0.686163
				5763	9,673,970 – 9,674,077	-	4	120	81.11	-2.01	0.67	0.860082
3579	3R_DroMel_CAF1	9,674,430 – 9,674,676	- - - - - - - - -	5764	9,674,430 – 9,674,542	+	5	120	94.20	-2.00	0.96	0.999324
				5765	9,674,462 – 9,674,582	+	5	120	99.67	-1.26	0.97	0.530973
				5766	9,674,462 – 9,674,582	-	5	120	99.67	-1.62	0.97	0.924618
				5767	9,674,502 – 9,674,609	+	5	120	93.94	-2.08	0.90	0.998018
				5768	9,674,502 – 9,674,609	-	5	120	93.94	-2.09	0.92	0.998962
				5769	9,674,542 – 9,674,636	+	5	120	86.08	-1.68	0.69	0.513822
				5770	9,674,542 – 9,674,636	-	5	120	86.08	-1.80	0.77	0.767956
				5771	9,674,582 – 9,674,676	+	5	120	85.13	-1.63	0.78	0.638274
3580	3R_DroMel_CAF1	9,675,418 – 9,675,634	- - - "knownCDS=texon3532;Parent=CG_NCBI_GNO_32273182, CG_RGUI_GID_mRNA_40008184, CG_DGIL_SNO_28365063" - - - - "Flybase=FBgn0041606:bereft:nuclear_untranslated_RNA_gene\|1e-07"	5772	9,675,418 – 9,675,538	-	5	120	96.50	-1.31	0.94	0.845044
				5773	9,675,458 – 9,675,554	-	4	120	81.33	-3.27	0.92	0.999252
				5774	9,675,498 – 9,675,594	-	4	120	77.62	-3.43	0.85	0.999865
				5775	9,675,538 – 9,675,634	-	4	120	78.09	-1.08	0.90	0.687996
3581	3R_DroMel_CAF1	9,676,437 – 9,676,542	- - - - - - - - -	5776	9,676,437 – 9,676,542	-	3	120	72.27	-0.91	0.78	0.606410
3582	3R_DroMel_CAF1	9,676,834 – 9,676,925	- - - - - - - - -	5777	9,676,834 – 9,676,925	+	3	91	81.95	-1.61	0.80	0.698175
3583	3R_DroMel_CAF1	9,679,401 – 9,679,513	- - - - - - - - -	5778	9,679,401 – 9,679,513	-	6	120	95.23	-2.12	0.92	0.996931
3584	3R_DroMel_CAF1	9,680,361 – 9,680,470	- - - "knownCDS=Parent=FBtr0082881;Name=CG14362-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14362-RA" - - - - -	5779	9,680,361 – 9,680,470	+	6	120	77.79	-1.48	0.66	0.783636
3584	3R_DroMel_CAF1	9,680,361 – 9,680,470		5780	9,680,361 – 9,680,470	-	6	120	77.79	-1.22	0.72	0.735027
3585	3R_DroMel_CAF1	9,682,042 – 9,682,138	- - "RNAmicro=f:9682042_t:9682137_strand:+_p:0.622042" - - - - - -	5781	9,682,042 – 9,682,138	+	5	96	95.62	-1.52	0.89	0.922860
3585	3R_DroMel_CAF1	9,682,042 – 9,682,138		5782	9,682,042 – 9,682,138	-	5	96	95.62	-1.26	0.89	0.660351
3586	3R_DroMel_CAF1	9,687,974 – 9,688,074	- - - - - - - - -	5783	9,687,974 – 9,688,074	+	6	114	79.95	-1.97	0.52	0.519921
3587	3R_DroMel_CAF1	9,688,690 – 9,688,780	- - - - - - - - -	5784	9,688,690 – 9,688,780	+	6	120	81.13	-1.75	0.63	0.635463
3588	3R_DroMel_CAF1	9,692,279 – 9,692,374	- - - - - - - - -	5785	9,692,279 – 9,692,374	-	6	120	80.45	-1.38	0.64	0.520325
3589	3R_DroMel_CAF1	9,692,545 – 9,692,642	- - - - - - - - -	5786	9,692,545 – 9,692,642	+	5	97	95.46	-1.94	0.77	0.619765
3590	3R_DroMel_CAF1	9,692,963 – 9,693,059	- - - - - - - - -	5787	9,692,963 – 9,693,059	-	5	102	73.54	-2.12	0.37	0.950068
3591	3R_DroMel_CAF1	9,697,290 – 9,697,400	- - - - - - - - -	5788	9,697,290 – 9,697,400	+	5	110	91.45	-3.20	0.90	0.999941
3592	3R_DroMel_CAF1	9,699,094 – 9,699,241	- - - "knownCDS=Parent=FBtr0082880;Name=E5-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9930-RA" - - - - -	5789	9,699,094 – 9,699,208	-	6	120	75.37	-2.37	0.46	0.944870
3592	3R_DroMel_CAF1	9,699,094 – 9,699,241		5790	9,699,134 – 9,699,241	-	6	117	74.90	-2.21	0.59	0.978689
3593	3R_DroMel_CAF1	9,700,189 – 9,700,289	- - - - - - - - -	5791	9,700,189 – 9,700,289	+	5	112	80.93	-1.83	0.60	0.594142
3594	3R_DroMel_CAF1	9,701,782 – 9,701,882	- - - - - - - - -	5792	9,701,782 – 9,701,882	-	3	100	93.33	-1.80	0.95	0.790819
3595	3R_DroMel_CAF1	9,702,362 – 9,702,458	- - - - - - - - -	5793	9,702,362 – 9,702,458	-	6	96	89.65	-2.96	0.84	0.970428
3596	3R_DroMel_CAF1	9,704,434 – 9,704,552	- - - - - - - - -	5794	9,704,434 – 9,704,524	+	6	91	89.00	-2.26	0.79	0.562216
3596	3R_DroMel_CAF1	9,704,434 – 9,704,552	- - - - - - - - -	5795	9,704,462 – 9,704,552	+	6	90	89.55	-3.02	0.85	0.985476
3597	3R_DroMel_CAF1	9,705,700 – 9,705,790	- - - - - - - - -	5796	9,705,700 – 9,705,790	+	6	92	79.81	-1.83	0.58	0.644721
3598	3R_DroMel_CAF1	9,706,513 – 9,706,607	- - - - - - - - -	5797	9,706,513 – 9,706,607	+	6	94	82.79	-3.94	0.60	0.934215
3598	3R_DroMel_CAF1	9,706,513 – 9,706,607	- - - - - - - - -	5798	9,706,513 – 9,706,607	-	6	94	82.79	-2.00	0.69	0.665306
3599	3R_DroMel_CAF1	9,707,302 – 9,707,396	- - - - - - - - -	5799	9,707,302 – 9,707,396	-	5	94	93.72	-2.53	0.83	0.995459
3600	3R_DroMel_CAF1	9,707,748 – 9,707,899	- - - - - - - - -	5800	9,707,748 – 9,707,861	+	5	119	93.10	-2.17	0.84	0.988679
				5801	9,707,748 – 9,707,861	-	5	119	93.10	-1.42	0.93	0.939049
				5802	9,707,787 – 9,707,899	+	5	118	87.90	-1.56	0.73	0.500000
				5803	9,707,787 – 9,707,899	-	5	118	87.90	-1.53	0.76	0.551866
3601	3R_DroMel_CAF1	9,708,556 – 9,708,716	- - - - - - - - -	5804	9,708,556 – 9,708,648	+	5	104	83.86	-2.49	0.64	0.893337
				5805	9,708,581 – 9,708,683	+	6	114	75.82	-2.44	0.42	0.921405
				5806	9,708,620 – 9,708,716	+	6	108	84.50	-3.80	0.67	0.870109
3602	3R_DroMel_CAF1	9,718,014 – 9,718,169	- - - - - - - - -	5807	9,718,014 – 9,718,129	-	6	120	86.81	-2.13	0.85	0.861465
3602	3R_DroMel_CAF1	9,718,014 – 9,718,169	- - - - - - - - -	5808	9,718,054 – 9,718,169	-	6	115	81.67	-1.72	0.79	0.785684
3603	3R_DroMel_CAF1	9,724,886 – 9,724,987	- - - - - - - - -	5809	9,724,886 – 9,724,987	+	6	117	77.07	-2.00	0.54	0.843123
3604	3R_DroMel_CAF1	9,728,880 – 9,728,997	- - - "knownCDS=Parent=FBtr0082863;Name=ems-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2988-RA" - - - - -	5810	9,728,880 – 9,728,997	+	6	120	79.29	-1.85	0.59	0.743344
3604	3R_DroMel_CAF1	9,728,880 – 9,728,997		5811	9,728,880 – 9,728,997	-	6	120	79.29	-1.85	0.65	0.844585
3605	3R_DroMel_CAF1	9,730,760 – 9,730,890	- - - - - - - - -	5812	9,730,760 – 9,730,872	+	6	120	83.99	-1.64	0.77	0.548561
3605	3R_DroMel_CAF1	9,730,760 – 9,730,890	- - - - - - - - -	5813	9,730,800 – 9,730,890	-	6	113	72.88	-0.90	0.70	0.633462
3606	3R_DroMel_CAF1	9,730,946 – 9,731,041	- - - - - - - - -	5814	9,730,946 – 9,731,041	-	6	112	84.44	-2.18	0.68	0.509287
3607	3R_DroMel_CAF1	9,731,175 – 9,731,266	- - - - - - - - -	5815	9,731,175 – 9,731,266	+	6	107	75.47	-2.65	0.41	0.968730
3608	3R_DroMel_CAF1	9,738,070 – 9,738,169	- - - - - - - - -	5816	9,738,070 – 9,738,169	+	5	100	88.60	-1.59	0.94	0.938129
3609	3R_DroMel_CAF1	9,739,961 – 9,740,063	- - - - - - - - -	5817	9,739,961 – 9,740,063	+	6	120	81.20	-2.66	0.58	0.857129
3610	3R_DroMel_CAF1	9,742,518 – 9,742,612	- - - - - - - - -	5818	9,742,518 – 9,742,612	-	5	94	86.60	-1.71	0.85	0.832840
3611	3R_DroMel_CAF1	9,746,899 – 9,746,992	- - - - - - - - -	5819	9,746,899 – 9,746,992	-	5	117	82.73	-1.84	0.67	0.679360
3612	3R_DroMel_CAF1	9,748,055 – 9,748,165	- - - - - - - - -	5820	9,748,055 – 9,748,165	+	6	116	87.24	-1.80	0.82	0.573225
3613	3R_DroMel_CAF1	9,754,748 – 9,754,850	- - - - - - - - -	5821	9,754,748 – 9,754,850	-	6	115	82.00	-2.52	0.62	0.800394
3614	3R_DroMel_CAF1	9,758,946 – 9,759,038	- - - - - - - - -	5822	9,758,946 – 9,759,038	+	5	94	80.59	-2.34	0.65	0.950128
3615	3R_DroMel_CAF1	9,760,957 – 9,761,077	- - - - - - - - -	5823	9,760,957 – 9,761,077	+	5	120	91.14	-1.18	0.92	0.607444
3616	3R_DroMel_CAF1	9,761,257 – 9,761,349	- - - - - - - - -	5824	9,761,257 – 9,761,349	-	6	96	82.37	-1.48	0.72	0.570301
3617	3R_DroMel_CAF1	9,762,822 – 9,762,920	- - - - - - - - -	5825	9,762,822 – 9,762,920	-	6	98	95.71	-2.36	0.82	0.812362
3618	3R_DroMel_CAF1	9,766,086 – 9,766,226	- - - - - - - - -	5826	9,766,086 – 9,766,187	-	5	102	88.52	-1.72	0.74	0.646042
3618	3R_DroMel_CAF1	9,766,086 – 9,766,226	- - - - - - - - -	5827	9,766,125 – 9,766,226	-	6	104	84.58	-3.42	0.69	0.807727
3619	3R_DroMel_CAF1	9,766,926 – 9,767,016	- - - - - - - - -	5828	9,766,926 – 9,767,016	-	6	117	80.80	-2.22	0.80	0.922380
3620	3R_DroMel_CAF1	9,768,765 – 9,768,876	- - - "knownCDS=Parent=FBtr0082879;Name=Art9-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9929-RA" - - - - -	5829	9,768,765 – 9,768,876	+	6	111	82.52	-2.53	0.75	0.876560
3621	3R_DroMel_CAF1	9,775,058 – 9,775,155	- - - - - - - - -	5830	9,775,058 – 9,775,155	+	6	110	78.03	-1.05	0.69	0.517443
3622	3R_DroMel_CAF1	9,775,547 – 9,775,637	- - - - - - - - -	5831	9,775,547 – 9,775,637	+	6	90	82.48	-1.92	0.61	0.524889
3623	3R_DroMel_CAF1	9,776,683 – 9,776,793	- - - "knownCDS=Parent=FBtr0082877;Name=CG9926-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9926-RA" - - - - -	5832	9,776,683 – 9,776,793	+	6	110	79.82	-1.69	0.63	0.708882
3623	3R_DroMel_CAF1	9,776,683 – 9,776,793		5833	9,776,683 – 9,776,793	-	6	110	79.82	-1.70	0.67	0.787413
3624	3R_DroMel_CAF1	9,777,414 – 9,777,505	- - - - - - - - -	5834	9,777,414 – 9,777,505	-	6	117	79.58	-1.88	0.68	0.869953
3625	3R_DroMel_CAF1	9,785,381 – 9,785,482	- - - - - - - - -	5835	9,785,381 – 9,785,482	-	6	114	75.09	-0.83	0.77	0.694341
3626	3R_DroMel_CAF1	9,788,154 – 9,788,265	- - - "knownCDS=Parent=FBtr0082876;Name=CG9925-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9925-RA" - - - - -	5836	9,788,154 – 9,788,265	-	6	111	80.84	-2.02	0.59	0.681524
3627	3R_DroMel_CAF1	9,794,637 – 9,794,736	- - - - - - - - -	5837	9,794,637 – 9,794,736	-	5	102	78.93	-2.37	0.70	0.983379
3628	3R_DroMel_CAF1	9,795,120 – 9,795,240	- - - "knownCDS=Parent=FBtr0100852;Name=CG9924-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9924-RD" - - - - -	5838	9,795,120 – 9,795,240	-	6	120	96.94	-0.98	0.97	0.895696
3629	3R_DroMel_CAF1	9,796,228 – 9,796,348	- - - "knownCDS=Parent=FBtr0082874, FBtr0100361, FBtr0082871;Name=CG9924-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9924-RC, FlyBase+Annotation+IDs:CG9924-RE, FlyBase+Annotation+IDs:CG9924-RA" - - - - -	5839	9,796,228 – 9,796,348	+	6	120	95.89	-1.55	0.91	0.949208
3630	3R_DroMel_CAF1	9,796,970 – 9,797,080	- - - "knownCDS=Parent=FBtr0082871;Name=CG9924-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9924-RA" - - - - -	5840	9,796,970 – 9,797,080	+	6	110	79.65	-1.04	0.75	0.544280
3631	3R_DroMel_CAF1	9,799,716 – 9,799,813	- - - - - - - - -	5841	9,799,716 – 9,799,813	+	4	107	90.65	-2.51	0.73	0.806620
3632	3R_DroMel_CAF1	9,808,732 – 9,808,827	- - - - - - - - -	5842	9,808,732 – 9,808,827	-	5	95	98.31	-2.76	1.00	0.999888
3633	3R_DroMel_CAF1	9,809,265 – 9,809,370	- - - - - - - - -	5843	9,809,265 – 9,809,370	+	5	119	83.30	-1.58	0.73	0.554891
3634	3R_DroMel_CAF1	9,810,265 – 9,810,373	- - - - - - - - -	5844	9,810,265 – 9,810,373	+	5	108	78.98	-1.41	0.77	0.656203
3635	3R_DroMel_CAF1	9,810,507 – 9,810,642	- - - - - - - - -	5845	9,810,507 – 9,810,604	-	6	118	81.27	-1.35	0.73	0.609949
3635	3R_DroMel_CAF1	9,810,507 – 9,810,642	- - - - - - - - -	5846	9,810,537 – 9,810,642	-	5	117	91.47	-1.57	0.95	0.978400
3636	3R_DroMel_CAF1	9,814,117 – 9,814,219	- - - - - - - - -	5847	9,814,117 – 9,814,219	-	5	111	89.29	-2.28	0.67	0.568173
3637	3R_DroMel_CAF1	9,815,430 – 9,815,529	- - - - - - - - -	5848	9,815,430 – 9,815,529	+	6	112	76.07	-1.50	0.56	0.500000
3638	3R_DroMel_CAF1	9,825,897 – 9,825,994	- - - - - - - - -	5849	9,825,897 – 9,825,994	+	5	99	92.59	-1.51	0.86	0.877542
3639	3R_DroMel_CAF1	9,833,473 – 9,833,565	- - - - - - - - -	5850	9,833,473 – 9,833,565	+	5	94	91.59	-1.92	0.76	0.767783
3640	3R_DroMel_CAF1	9,834,065 – 9,834,193	- - - - - - - - -	5851	9,834,065 – 9,834,160	+	5	96	93.70	-2.24	0.83	0.986219
3640	3R_DroMel_CAF1	9,834,065 – 9,834,193	- - - - - - - - -	5852	9,834,094 – 9,834,193	+	5	100	93.55	-1.87	0.93	0.997042
3641	3R_DroMel_CAF1	9,834,328 – 9,834,429	- - - - - - - - -	5853	9,834,328 – 9,834,429	+	5	103	95.21	-1.68	0.86	0.932204
3641	3R_DroMel_CAF1	9,834,328 – 9,834,429	- - - - - - - - -	5854	9,834,328 – 9,834,429	-	5	103	95.21	-2.15	0.85	0.989352
3642	3R_DroMel_CAF1	9,835,183 – 9,835,285	- - - - - - - - -	5855	9,835,183 – 9,835,285	-	5	102	95.46	-2.44	0.92	0.999696
3643	3R_DroMel_CAF1	9,840,307 – 9,840,417	- - - - - - - - -	5856	9,840,307 – 9,840,417	-	5	110	91.27	-2.09	0.72	0.622905
3644	3R_DroMel_CAF1	9,841,819 – 9,841,913	- - - - - - - - -	5857	9,841,819 – 9,841,913	+	4	95	88.93	-1.47	0.78	0.572652
3645	3R_DroMel_CAF1	9,842,824 – 9,842,949	- - - - - - - - -	5858	9,842,824 – 9,842,922	-	4	102	86.45	-2.74	0.84	0.989900
				5859	9,842,852 – 9,842,949	+	4	97	83.10	-1.48	0.73	0.529603
				5860	9,842,852 – 9,842,949	-	4	97	83.10	-1.91	0.72	0.823090
3646	3R_DroMel_CAF1	9,851,774 – 9,851,879	- - - - - - - - -	5861	9,851,774 – 9,851,879	+	5	105	91.43	-1.75	0.81	0.887543
3647	3R_DroMel_CAF1	9,852,309 – 9,852,440	- - - - - - - - -	5862	9,852,309 – 9,852,413	-	4	104	86.97	-1.69	0.80	0.743709
				5863	9,852,344 – 9,852,440	+	4	96	87.63	-2.04	0.77	0.865260
				5864	9,852,344 – 9,852,440	-	4	96	87.63	-2.29	0.87	0.971831
3648	3R_DroMel_CAF1	9,855,540 – 9,855,641	- - - - - - - - -	5865	9,855,540 – 9,855,641	-	5	116	78.06	-1.91	0.36	0.569087
3649	3R_DroMel_CAF1	9,862,431 – 9,862,521	- - - - - - - - -	5866	9,862,431 – 9,862,521	+	6	102	81.98	-2.60	0.49	0.515505
3650	3R_DroMel_CAF1	9,863,876 – 9,863,966	- - - - - - - - -	5867	9,863,876 – 9,863,966	-	4	108	81.61	-2.11	0.59	0.714180
3651	3R_DroMel_CAF1	9,864,599 – 9,864,698	- - - - - - - - -	5868	9,864,599 – 9,864,698	-	3	99	85.05	-1.71	0.78	0.551071
3652	3R_DroMel_CAF1	9,865,263 – 9,865,381	- - - - - - - - -	5869	9,865,263 – 9,865,381	+	6	119	78.30	-1.23	0.65	0.531380
3653	3R_DroMel_CAF1	9,869,778 – 9,869,882	- - - - - - - - -	5870	9,869,778 – 9,869,882	-	6	117	78.15	-1.14	0.68	0.564853
3654	3R_DroMel_CAF1	9,870,229 – 9,870,328	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000217;Name=Dmel_Ser_GCT_14000217;TFAMID=DmelSGCT-9870328" "tRNAscan=type:Ser:anticodon:GCT f:9870246_t:9870344_strand=-_cove=82.84" - - "Rfam=AC106019.4/24546-24627_RF00005;tRNA;\|1e-33" - - "ncRNAdb=MmuscAK082357_unclassifiable\|7e-33" "Flybase=FBgn0011970:transfer_RNA:ser2b:86A:cytosolic_tRNA_gene\|1e-42"	5871	9,870,229 – 9,870,328	+	6	120	81.95	-1.25	0.96	0.631284
3654	3R_DroMel_CAF1	9,870,229 – 9,870,328		5872	9,870,229 – 9,870,328	-	6	120	81.95	-1.71	0.94	0.892362
3655	3R_DroMel_CAF1	9,872,323 – 9,872,425	- - - - - - - - -	5873	9,872,323 – 9,872,425	-	6	120	74.83	-1.83	0.58	0.905151
3656	3R_DroMel_CAF1	9,885,361 – 9,885,480	- - - - - - - - -	5874	9,885,361 – 9,885,480	+	5	119	95.27	-1.30	0.93	0.856555
3657	3R_DroMel_CAF1	9,896,350 – 9,896,452	- - - - - - - - -	5875	9,896,350 – 9,896,452	+	5	107	72.61	-1.99	0.55	0.947129
3658	3R_DroMel_CAF1	9,904,664 – 9,904,757	- - - - - - - - -	5876	9,904,664 – 9,904,757	+	6	107	82.63	-1.54	0.75	0.599658
3658	3R_DroMel_CAF1	9,904,664 – 9,904,757	- - - - - - - - -	5877	9,904,664 – 9,904,757	-	6	107	82.63	-1.69	0.65	0.511180
3659	3R_DroMel_CAF1	9,907,007 – 9,907,113	- - - - - - - - -	5878	9,907,007 – 9,907,113	+	6	119	75.50	-1.07	0.67	0.565437
3660	3R_DroMel_CAF1	9,908,553 – 9,908,643	- - - - - - - - -	5879	9,908,553 – 9,908,643	-	6	92	85.52	-1.87	0.80	0.597503
3661	3R_DroMel_CAF1	9,908,925 – 9,909,018	- - - - - - - - -	5880	9,908,925 – 9,909,018	-	6	110	69.74	-2.24	0.40	0.965824
3662	3R_DroMel_CAF1	9,914,416 – 9,914,535	- - - - - - - - -	5881	9,914,416 – 9,914,506	+	4	93	88.89	-1.82	0.68	0.579065
3662	3R_DroMel_CAF1	9,914,416 – 9,914,535	- - - - - - - - -	5882	9,914,429 – 9,914,535	+	4	120	75.71	-2.07	0.58	0.897138
3663	3R_DroMel_CAF1	9,915,863 – 9,915,996	- - - - - - - - -	5883	9,915,863 – 9,915,969	+	6	114	79.60	-2.00	0.52	0.566619
				5884	9,915,863 – 9,915,969	-	6	114	79.60	-2.03	0.62	0.853759
				5885	9,915,892 – 9,915,996	-	6	120	81.22	-1.96	0.64	0.739402
3664	3R_DroMel_CAF1	9,920,284 – 9,920,377	- - - - - - - - -	5886	9,920,284 – 9,920,377	+	6	97	80.41	-1.39	0.71	0.665300
3665	3R_DroMel_CAF1	9,926,976 – 9,927,096	- - - - - - - - -	5887	9,926,976 – 9,927,096	-	3	120	96.08	-1.68	0.97	0.732962
3666	3R_DroMel_CAF1	9,932,940 – 9,933,046	- - - "knownCDS=Parent=FBtr0082914;Name=CG12402-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12402-RA" - - - - -	5888	9,932,940 – 9,933,046	+	6	119	79.27	-1.84	0.68	0.880275
3667	3R_DroMel_CAF1	9,934,084 – 9,934,181	- - - - - - - - -	5889	9,934,084 – 9,934,181	+	6	108	76.26	-1.68	0.56	0.721585
3668	3R_DroMel_CAF1	9,938,615 – 9,938,710	- - - "knownCDS=Parent=FBtr0082911, FBtr0082912;Name=Kif19A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9913-RA, FlyBase+Annotation+IDs:CG9913-RB" - - - - -	5890	9,938,615 – 9,938,710	+	6	97	74.57	-1.19	0.69	0.790589
3669	3R_DroMel_CAF1	9,946,573 – 9,946,693	- - - "knownCDS=Parent=FBtr0082910;Name=Abi-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9749-RA" - - - - -	5891	9,946,573 – 9,946,693	+	6	120	84.61	-1.83	0.74	0.513264
3670	3R_DroMel_CAF1	9,946,733 – 9,946,844	- - - "knownCDS=Parent=FBtr0082910;Name=Abi-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9749-RA" - - - - -	5892	9,946,733 – 9,946,844	+	6	114	78.64	-2.38	0.41	0.605207
3670	3R_DroMel_CAF1	9,946,733 – 9,946,844		5893	9,946,733 – 9,946,844	-	6	114	78.64	-2.92	0.40	0.907466
3671	3R_DroMel_CAF1	9,947,216 – 9,947,314	- - - - - - - - -	5894	9,947,216 – 9,947,314	+	3	98	95.90	-1.41	0.97	0.513707
3672	3R_DroMel_CAF1	9,951,557 – 9,951,662	- - - - - - - - -	5895	9,951,557 – 9,951,662	+	6	105	82.54	-1.93	0.62	0.550331
3673	3R_DroMel_CAF1	9,959,298 – 9,959,403	- - - - - - - - -	5896	9,959,298 – 9,959,403	+	6	113	79.52	-1.58	0.62	0.633851
3674	3R_DroMel_CAF1	9,961,132 – 9,961,236	- - - - - - - - -	5897	9,961,132 – 9,961,236	-	6	108	82.45	-2.70	0.74	0.889420
3675	3R_DroMel_CAF1	9,961,613 – 9,961,717	- - - - - - - - -	5898	9,961,613 – 9,961,717	+	6	109	77.35	-1.20	0.69	0.692612
3676	3R_DroMel_CAF1	9,965,941 – 9,966,031	- - - - - - - - -	5899	9,965,941 – 9,966,031	-	6	105	73.31	-2.31	0.36	0.896371
3677	3R_DroMel_CAF1	9,970,959 – 9,971,053	- - - - - - - - -	5900	9,970,959 – 9,971,053	+	4	95	86.75	-1.51	0.68	0.529750
3678	3R_DroMel_CAF1	9,974,411 – 9,974,526	- - - "knownCDS=Parent=FBtr0082907;Name=CG14355-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14355-RA" - - - - -	5901	9,974,411 – 9,974,526	+	6	115	73.40	-1.68	0.52	0.705624
3679	3R_DroMel_CAF1	9,978,037 – 9,978,135	- - - "knownCDS=Parent=FBtr0082893;Name=CG14359-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14359-RA" - - - - -	5902	9,978,037 – 9,978,135	+	5	119	70.11	-1.92	0.25	0.806801
3679	3R_DroMel_CAF1	9,978,037 – 9,978,135		5903	9,978,037 – 9,978,135	-	5	119	70.11	-1.75	0.34	0.593860
3680	3R_DroMel_CAF1	9,978,632 – 9,978,912	- - - "knownCDS=Parent=FBtr0082906;Name=CG9722-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9722-RA" - - - - -	5904	9,978,632 – 9,978,752	+	5	120	81.58	-2.17	0.45	0.520904
				5905	9,978,632 – 9,978,752	-	5	120	81.58	-1.51	0.71	0.512828
				5906	9,978,672 – 9,978,792	+	5	120	92.17	-1.42	0.79	0.541990
				5907	9,978,672 – 9,978,792	-	5	120	92.17	-1.77	0.89	0.982922
				5908	9,978,712 – 9,978,832	+	5	120	94.08	-1.53	0.83	0.789399
				5909	9,978,752 – 9,978,872	+	5	120	94.92	-1.42	0.94	0.949837
				5910	9,978,752 – 9,978,872	-	5	120	94.92	-1.12	0.92	0.601056
				5911	9,978,792 – 9,978,912	-	5	120	93.67	-1.36	0.84	0.632474
3681	3R_DroMel_CAF1	9,979,192 – 9,979,312	- - - "knownCDS=Parent=FBtr0082906;Name=CG9722-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9722-RA" - - - - -	5912	9,979,192 – 9,979,312	-	5	120	88.50	-1.77	0.80	0.834191
3682	3R_DroMel_CAF1	9,979,392 – 9,979,506	- - - "knownCDS=Parent=FBtr0082906;Name=CG9722-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9722-RA" - - - - -	5913	9,979,392 – 9,979,506	+	5	120	84.56	-1.64	0.80	0.660450
3682	3R_DroMel_CAF1	9,979,392 – 9,979,506		5914	9,979,392 – 9,979,506	-	5	120	84.56	-2.37	0.74	0.946278
3683	3R_DroMel_CAF1	9,982,161 – 9,982,281	- - - "knownCDS=Parent=FBtr0082905;Name=CG31533-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31533-RA" - - - - -	5915	9,982,161 – 9,982,281	-	6	120	77.02	-1.51	0.60	0.639609
3684	3R_DroMel_CAF1	9,983,644 – 9,983,750	- - - "knownCDS=Parent=FBtr0082904;Name=CG31327-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31327-RA" - - - - -	5916	9,983,644 – 9,983,750	-	6	112	77.41	-1.87	0.51	0.638114
3685	3R_DroMel_CAF1	9,989,099 – 9,989,216	- - - - - - - - -	5917	9,989,099 – 9,989,216	-	6	120	81.01	-1.88	0.61	0.651680
3686	3R_DroMel_CAF1	9,994,888 – 9,994,990	- - - - - - - - -	5918	9,994,888 – 9,994,990	+	5	110	90.64	-2.02	0.82	0.962304
3687	3R_DroMel_CAF1	9,995,578 – 9,995,696	- - - - - - - - -	5919	9,995,578 – 9,995,696	-	5	120	86.72	-2.72	0.61	0.688197
3688	3R_DroMel_CAF1	9,999,076 – 9,999,189	- - - - - - - - -	5920	9,999,076 – 9,999,189	+	6	113	82.36	-2.68	0.66	0.832712
3689	3R_DroMel_CAF1	9,999,749 – 9,999,856	- - - - - - - - -	5921	9,999,749 – 9,999,856	+	6	107	93.64	-1.85	0.86	0.857055
3690	3R_DroMel_CAF1	10,003,076 – 10,003,169	- - - - - - - - -	5922	10,003,076 – 10,003,169	+	6	106	81.72	-2.14	0.69	0.810993
3691	3R_DroMel_CAF1	10,003,440 – 10,003,549	- - - - - - - - -	5923	10,003,440 – 10,003,549	-	6	120	78.38	-2.01	0.50	0.625226
3692	3R_DroMel_CAF1	10,006,250 – 10,006,341	- - - - - - - - -	5924	10,006,250 – 10,006,341	-	3	91	100.00	-1.74	1.00	0.808023
3693	3R_DroMel_CAF1	10,012,649 – 10,012,743	- - - - - - - - -	5925	10,012,649 – 10,012,743	+	5	96	97.26	-1.21	0.93	0.635964
3693	3R_DroMel_CAF1	10,012,649 – 10,012,743	- - - - - - - - -	5926	10,012,649 – 10,012,743	-	5	96	97.26	-2.00	0.97	0.998329
3694	3R_DroMel_CAF1	10,016,944 – 10,017,038	- - - - - - - - -	5927	10,016,944 – 10,017,038	-	6	101	76.54	-1.39	0.65	0.747894
3695	3R_DroMel_CAF1	10,029,681 – 10,029,776	- - - - - - - - -	5928	10,029,681 – 10,029,776	-	6	106	79.99	-1.48	0.65	0.638726
3696	3R_DroMel_CAF1	10,032,710 – 10,032,820	- - - - - - - - -	5929	10,032,710 – 10,032,820	-	6	112	82.83	-2.42	0.64	0.701408
3697	3R_DroMel_CAF1	10,035,816 – 10,035,912	- - - - - - - - -	5930	10,035,816 – 10,035,912	+	6	118	80.13	-4.29	0.62	0.985825
3698	3R_DroMel_CAF1	10,040,197 – 10,040,293	- - - - - - - - -	5931	10,040,197 – 10,040,293	+	5	96	95.73	-2.30	0.93	0.999547
3699	3R_DroMel_CAF1	10,041,706 – 10,041,816	- - - "knownCDS=Parent=FBtr0082902;Name=CG9649-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9649-RA" - - - - -	5932	10,041,706 – 10,041,816	+	6	112	80.60	-1.21	0.68	0.500000
3700	3R_DroMel_CAF1	10,042,564 – 10,042,662	- - - - - - - - -	5933	10,042,564 – 10,042,662	-	3	99	95.95	-2.28	0.95	0.926605
3701	3R_DroMel_CAF1	10,044,385 – 10,044,489	- - - "knownCDS=Parent=FBtr0082901;Name=CG31326-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31326-RA" - - - - -	5934	10,044,385 – 10,044,489	-	6	115	72.29	-2.05	0.32	0.603469
3702	3R_DroMel_CAF1	10,046,571 – 10,046,691	- - - "knownCDS=Parent=FBtr0082900;Name=CG33109-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33109-RA" - - - - -	5935	10,046,571 – 10,046,691	-	6	120	76.00	-1.29	0.62	0.545977
3703	3R_DroMel_CAF1	10,047,278 – 10,047,391	- - - - - - - - -	5936	10,047,278 – 10,047,391	-	6	120	74.84	-2.07	0.41	0.724148
3704	3R_DroMel_CAF1	10,056,654 – 10,056,755	- - - - - - - - -	5937	10,056,654 – 10,056,755	-	6	108	59.55	-1.52	0.40	0.730082
3705	3R_DroMel_CAF1	10,058,099 – 10,058,192	- - - - - - - - -	5938	10,058,099 – 10,058,192	-	4	93	90.68	-1.84	0.75	0.654389
3706	3R_DroMel_CAF1	10,059,461 – 10,059,559	- - - - - - - - -	5939	10,059,461 – 10,059,559	+	6	106	81.12	-1.25	0.74	0.571496
3707	3R_DroMel_CAF1	10,059,982 – 10,060,079	- - - - - - - - -	5940	10,059,982 – 10,060,079	+	6	98	78.67	-2.36	0.54	0.902924
3708	3R_DroMel_CAF1	10,084,149 – 10,084,291	- - - - - - - - -	5941	10,084,149 – 10,084,258	-	6	113	82.31	-2.34	0.63	0.731041
3708	3R_DroMel_CAF1	10,084,149 – 10,084,291	- - - - - - - - -	5942	10,084,185 – 10,084,291	-	5	112	85.95	-1.69	0.72	0.603583
3709	3R_DroMel_CAF1	10,085,395 – 10,085,491	- - - "knownCDS=Parent=FBtr0082895;Name=Aats-met-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31322-RA" - - - - -	5943	10,085,395 – 10,085,491	+	6	96	78.81	-1.19	0.71	0.641208
3710	3R_DroMel_CAF1	10,086,213 – 10,086,333	- - - "knownCDS=Parent=FBtr0082952;Name=CG14840-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14840-RA" - - - - -	5944	10,086,213 – 10,086,333	+	6	120	80.39	-2.33	0.61	0.874929
3711	3R_DroMel_CAF1	10,086,493 – 10,086,613	- - - "knownCDS=Parent=FBtr0082952;Name=CG14840-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14840-RA" - - - - -	5945	10,086,493 – 10,086,613	+	6	120	79.50	-2.09	0.52	0.669261
3711	3R_DroMel_CAF1	10,086,493 – 10,086,613		5946	10,086,493 – 10,086,613	-	6	120	79.50	-1.79	0.57	0.603209
3712	3R_DroMel_CAF1	10,087,241 – 10,087,430	- - - "knownCDS=Parent=FBtr0082951;Name=CG14841-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14841-RA" - - - - -	5947	10,087,241 – 10,087,353	-	6	120	81.50	-1.88	0.60	0.566775
3712	3R_DroMel_CAF1	10,087,241 – 10,087,430		5948	10,087,313 – 10,087,430	-	6	117	80.68	-1.96	0.63	0.772464
3713	3R_DroMel_CAF1	10,087,710 – 10,087,825	- - - "knownCDS=Parent=FBtr0082951;Name=CG14841-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14841-RA" - - - - -	5949	10,087,710 – 10,087,825	+	6	115	81.04	-1.67	0.63	0.614430
3714	3R_DroMel_CAF1	10,088,827 – 10,088,947	- - - "knownCDS=Parent=FBtr0082920;Name=CG14839-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14839-RA" - - - - -	5950	10,088,827 – 10,088,947	-	6	120	75.00	-1.75	0.55	0.792460
3715	3R_DroMel_CAF1	10,090,193 – 10,090,349	- - - - - - - - -	5951	10,090,193 – 10,090,311	-	4	118	95.62	-1.75	0.96	0.849954
3715	3R_DroMel_CAF1	10,090,193 – 10,090,349	- - - - - - - - -	5952	10,090,231 – 10,090,349	-	4	120	91.53	-2.62	0.88	0.986233
3716	3R_DroMel_CAF1	10,090,863 – 10,090,972	- - - "knownCDS=Parent=FBtr0082948;Name=trx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8651-RB" - - - - -	5953	10,090,863 – 10,090,972	+	6	113	79.70	-1.11	0.69	0.500000
3717	3R_DroMel_CAF1	10,094,373 – 10,094,481	- - - "knownCDS=Parent=FBtr0082947;Name=trx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8651-RA" - - - - -	5954	10,094,373 – 10,094,481	-	6	120	72.75	-2.01	0.38	0.702429
3718	3R_DroMel_CAF1	10,100,018 – 10,100,114	- - - "knownCDS=Parent=FBtr0082947;Name=trx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8651-RA" - - - - -	5955	10,100,018 – 10,100,114	+	6	96	81.32	-2.18	0.71	0.864278
3718	3R_DroMel_CAF1	10,100,018 – 10,100,114		5956	10,100,018 – 10,100,114	-	6	96	81.32	-2.66	0.77	0.936281
3719	3R_DroMel_CAF1	10,102,241 – 10,102,390	- - - "knownCDS=Parent=FBtr0082947;Name=trx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8651-RA" - - - - -	5957	10,102,241 – 10,102,350	+	5	109	97.43	-1.38	0.91	0.773889
				5958	10,102,241 – 10,102,350	-	5	109	97.43	-1.82	0.84	0.842987
				5959	10,102,272 – 10,102,390	+	5	118	95.25	-2.10	0.87	0.992835
				5960	10,102,272 – 10,102,390	-	5	118	95.25	-1.47	0.84	0.714570
3720	3R_DroMel_CAF1	10,102,499 – 10,102,641	- - - "knownCDS=Parent=FBtr0082947;Name=trx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8651-RA" - - - - -	5961	10,102,499 – 10,102,601	-	5	102	93.73	-1.21	0.85	0.500000
3720	3R_DroMel_CAF1	10,102,499 – 10,102,641		5962	10,102,521 – 10,102,641	+	5	120	93.42	-1.18	0.88	0.578435
3721	3R_DroMel_CAF1	10,104,435 – 10,104,527	- - - - - - - - -	5963	10,104,435 – 10,104,527	-	5	97	97.02	-1.53	0.99	0.980216
3722	3R_DroMel_CAF1	10,111,506 – 10,111,603	- - - - - - - - -	5964	10,111,506 – 10,111,603	+	6	120	72.37	-1.60	0.51	0.614482
3723	3R_DroMel_CAF1	10,113,137 – 10,113,289	- - - - - - - - -	5965	10,113,137 – 10,113,250	+	5	120	91.54	-1.97	0.89	0.994212
				5966	10,113,137 – 10,113,250	-	5	120	91.54	-1.44	0.88	0.857161
				5967	10,113,171 – 10,113,289	+	5	120	93.60	-1.27	0.86	0.632321
				5968	10,113,171 – 10,113,289	-	5	120	93.60	-2.64	0.85	0.998646
3724	3R_DroMel_CAF1	10,116,510 – 10,116,620	- - - - - - - - -	5969	10,116,510 – 10,116,620	+	4	120	83.18	-1.75	0.61	0.500000
3725	3R_DroMel_CAF1	10,117,479 – 10,117,580	- - - - - - - - -	5970	10,117,479 – 10,117,580	-	5	120	79.93	-1.75	0.64	0.664461
3726	3R_DroMel_CAF1	10,117,942 – 10,118,040	- - - - - - - - -	5971	10,117,942 – 10,118,040	+	5	120	77.70	-1.71	0.60	0.632716
3727	3R_DroMel_CAF1	10,118,693 – 10,118,844	- - - - - - - - -	5972	10,118,693 – 10,118,804	+	3	116	80.30	-2.32	0.80	0.979152
				5973	10,118,693 – 10,118,804	-	3	116	80.30	-1.20	0.82	0.550004
				5974	10,118,730 – 10,118,844	+	4	120	79.86	-1.96	0.58	0.611835
3728	3R_DroMel_CAF1	10,122,054 – 10,122,155	- - - - - - - - -	5975	10,122,054 – 10,122,155	+	5	120	86.96	-2.08	0.64	0.521953
3728	3R_DroMel_CAF1	10,122,054 – 10,122,155	- - - - - - - - -	5976	10,122,054 – 10,122,155	-	5	120	86.96	-2.34	0.68	0.768249
3729	3R_DroMel_CAF1	10,122,311 – 10,122,427	- - - - - - - - -	5977	10,122,311 – 10,122,427	+	5	120	86.60	-2.35	0.83	0.985657
3730	3R_DroMel_CAF1	10,123,819 – 10,124,131	- - - - - - - - -	5978	10,123,819 – 10,123,939	+	5	120	76.83	-1.94	0.38	0.703923
				5979	10,123,859 – 10,123,979	+	4	120	79.31	-2.23	0.60	0.892348
				5980	10,123,899 – 10,124,019	+	5	120	78.89	-2.00	0.49	0.682341
				5981	10,124,019 – 10,124,131	-	5	120	87.21	-1.63	0.73	0.551201
3731	3R_DroMel_CAF1	10,124,934 – 10,125,042	- - - - - - - - -	5982	10,124,934 – 10,125,042	+	3	109	97.55	-1.87	0.96	0.789046
3732	3R_DroMel_CAF1	10,125,229 – 10,125,321	- - - - - - - - -	5983	10,125,229 – 10,125,321	-	5	93	93.66	-2.07	0.87	0.994345
3733	3R_DroMel_CAF1	10,128,602 – 10,128,706	- - - "knownCDS=Parent=FBtr0082924;Name=CG3259-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3259-RA" - - - - -	5984	10,128,602 – 10,128,706	-	6	104	74.94	-2.28	0.38	0.813039
3734	3R_DroMel_CAF1	10,132,537 – 10,132,657	- - - "knownCDS=Parent=FBtr0082945, FBtr0082946;Name=su(Hw)-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8573-RB, FlyBase+Annotation+IDs:CG8573-RA" - - - - -	5985	10,132,537 – 10,132,657	-	6	120	79.33	-1.65	0.63	0.719986
3735	3R_DroMel_CAF1	10,133,287 – 10,133,396	- - - "knownCDS=Parent=FBtr0082945, FBtr0082946;Name=su(Hw)-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8573-RB, FlyBase+Annotation+IDs:CG8573-RA" - - - - -	5986	10,133,287 – 10,133,396	+	6	112	80.24	-1.32	0.69	0.615270
3736	3R_DroMel_CAF1	10,133,731 – 10,133,825	- - - - - - - - -	5987	10,133,731 – 10,133,825	-	6	103	78.06	-2.26	0.64	0.958269
3737	3R_DroMel_CAF1	10,136,253 – 10,136,348	- - - "knownCDS=Parent=FBtr0082926;Name=CG31321-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31321-RB" - - - - -	5988	10,136,253 – 10,136,348	+	6	107	82.49	-1.59	0.71	0.598486
3737	3R_DroMel_CAF1	10,136,253 – 10,136,348		5989	10,136,253 – 10,136,348	-	6	107	82.49	-1.89	0.65	0.604692
3738	3R_DroMel_CAF1	10,146,738 – 10,146,870	- - - - - - - - -	5990	10,146,738 – 10,146,853	+	4	116	86.36	-1.68	0.71	0.656244
				5991	10,146,738 – 10,146,853	-	4	116	86.36	-2.09	0.62	0.581477
				5992	10,146,778 – 10,146,870	+	4	93	88.93	-2.30	0.72	0.825963
				5993	10,146,778 – 10,146,870	-	4	93	88.93	-1.69	0.68	0.519891
3739	3R_DroMel_CAF1	10,147,533 – 10,147,644	- - - "knownCDS=Parent=FBtr0082944;Name=CG8538-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8538-RA" - - - - -	5994	10,147,533 – 10,147,644	+	6	111	80.54	-1.74	0.57	0.513172
3740	3R_DroMel_CAF1	10,151,126 – 10,151,275	- - - "knownCDS=Parent=FBtr0082944;Name=CG8538-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8538-RA" - - - - -	5995	10,151,126 – 10,151,235	-	5	109	85.78	-2.93	0.60	0.825472
				5996	10,151,155 – 10,151,275	+	5	120	87.17	-2.32	0.65	0.637994
				5997	10,151,155 – 10,151,275	-	5	120	87.17	-2.18	0.67	0.652826
3741	3R_DroMel_CAF1	10,155,285 – 10,155,400	- - - - - - - - -	5998	10,155,285 – 10,155,400	-	3	115	75.78	-2.27	0.59	0.966131
3742	3R_DroMel_CAF1	10,156,089 – 10,156,193	- - - "knownCDS=Parent=FBtr0082941, FBtr0082942;Name=NK7.1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8524-RA, FlyBase+Annotation+IDs:CG8524-RB" - - - - -	5999	10,156,089 – 10,156,193	+	6	114	72.22	-1.84	0.60	0.954730
3743	3R_DroMel_CAF1	10,156,204 – 10,156,303	- - - "knownCDS=Parent=FBtr0082941, FBtr0082942;Name=NK7.1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8524-RA, FlyBase+Annotation+IDs:CG8524-RB" - - - - -	6000	10,156,204 – 10,156,303	-	6	120	76.67	-1.63	0.59	0.754119
3744	3R_DroMel_CAF1	10,159,947 – 10,160,042	- - - - - - - - -	6001	10,159,947 – 10,160,042	+	3	105	76.41	-1.39	0.78	0.842975
3744	3R_DroMel_CAF1	10,159,947 – 10,160,042	- - - - - - - - -	6002	10,159,947 – 10,160,042	-	3	105	76.41	-0.76	0.84	0.509024
3745	3R_DroMel_CAF1	10,162,914 – 10,163,009	- - - - - - - - -	6003	10,162,914 – 10,163,009	-	5	101	85.86	-3.16	0.85	0.999025
3746	3R_DroMel_CAF1	10,163,310 – 10,163,400	- - - - - - - - -	6004	10,163,310 – 10,163,400	+	6	98	91.77	-1.74	0.85	0.719533
3747	3R_DroMel_CAF1	10,164,404 – 10,164,495	- - - - - - - - -	6005	10,164,404 – 10,164,495	+	6	97	77.02	-2.42	0.38	0.729023
3747	3R_DroMel_CAF1	10,164,404 – 10,164,495	- - - - - - - - -	6006	10,164,404 – 10,164,495	-	6	97	77.02	-2.13	0.40	0.500000
3748	3R_DroMel_CAF1	10,169,570 – 10,169,707	- - - - - - - - -	6007	10,169,570 – 10,169,683	-	6	119	87.10	-2.55	0.83	0.893243
				6008	10,169,609 – 10,169,707	+	6	108	76.74	-1.32	0.70	0.811907
				6009	10,169,609 – 10,169,707	-	6	108	76.74	-1.85	0.59	0.875417
3749	3R_DroMel_CAF1	10,170,556 – 10,170,671	- - - "knownCDS=Parent=FBtr0082941, FBtr0082942;Name=NK7.1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8524-RA, FlyBase+Annotation+IDs:CG8524-RB" - - - - -	6010	10,170,556 – 10,170,671	-	6	115	82.60	-1.51	0.68	0.505602
3750	3R_DroMel_CAF1	10,171,038 – 10,171,128	- - - - - - - - -	6011	10,171,038 – 10,171,128	-	6	94	79.42	-1.73	0.67	0.830506
3751	3R_DroMel_CAF1	10,172,448 – 10,172,538	- - - - - - - - -	6012	10,172,448 – 10,172,538	+	4	103	89.27	-1.54	0.95	0.842980
3752	3R_DroMel_CAF1	10,173,940 – 10,174,043	- - - - - - - - -	6013	10,173,940 – 10,174,043	+	5	106	89.15	-1.79	0.73	0.633846
3753	3R_DroMel_CAF1	10,176,801 – 10,176,891	- - - - - - - - -	6014	10,176,801 – 10,176,891	+	6	90	95.40	-1.76	0.91	0.976868
3753	3R_DroMel_CAF1	10,176,801 – 10,176,891	- - - - - - - - -	6015	10,176,801 – 10,176,891	-	6	90	95.40	-1.11	0.96	0.906835
3754	3R_DroMel_CAF1	10,178,724 – 10,178,821	- - - - - - - - -	6016	10,178,724 – 10,178,821	+	4	97	84.88	-1.49	0.79	0.579638
3755	3R_DroMel_CAF1	10,179,288 – 10,179,398	- - - - - - - - -	6017	10,179,288 – 10,179,398	-	6	118	76.67	-1.28	0.62	0.532568
3756	3R_DroMel_CAF1	10,179,989 – 10,180,079	- - - - - - - - -	6018	10,179,989 – 10,180,079	+	3	93	95.68	-2.68	0.82	0.742851
3757	3R_DroMel_CAF1	10,185,241 – 10,185,361	- - - "knownCDS=Parent=FBtr0082943;Name=CG31320-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31320-RA" - - - - -	6019	10,185,241 – 10,185,361	+	6	120	77.78	-1.62	0.60	0.702605
3758	3R_DroMel_CAF1	10,187,018 – 10,187,136	- - - - - - - - -	6020	10,187,018 – 10,187,136	+	5	120	66.21	-2.56	0.19	0.841101
3759	3R_DroMel_CAF1	10,190,203 – 10,190,331	- - - - - - - - -	6021	10,190,203 – 10,190,297	-	4	98	78.01	-1.57	0.70	0.606438
3759	3R_DroMel_CAF1	10,190,203 – 10,190,331	- - - - - - - - -	6022	10,190,239 – 10,190,331	-	4	92	70.41	-1.78	0.65	0.970165
3760	3R_DroMel_CAF1	10,203,541 – 10,203,633	- - - - - - - - -	6023	10,203,541 – 10,203,633	+	6	104	81.05	-1.52	0.69	0.662254
3761	3R_DroMel_CAF1	10,204,863 – 10,204,954	- - - - - - - - -	6024	10,204,863 – 10,204,954	+	6	107	82.86	-2.15	0.61	0.536998
3762	3R_DroMel_CAF1	10,204,997 – 10,205,097	- - - - - - - - -	6025	10,204,997 – 10,205,097	-	4	109	70.91	-2.38	0.39	0.629488
3763	3R_DroMel_CAF1	10,205,834 – 10,205,965	- - - - - - - - -	6026	10,205,834 – 10,205,930	+	6	118	82.64	-2.45	0.75	0.857654
				6027	10,205,834 – 10,205,930	-	6	118	82.64	-2.35	0.62	0.663432
				6028	10,205,852 – 10,205,965	+	6	116	85.38	-2.89	0.67	0.518970
3764	3R_DroMel_CAF1	10,206,638 – 10,206,750	- - - - - - - - -	6029	10,206,638 – 10,206,750	-	4	120	81.18	-2.24	0.60	0.855791
3765	3R_DroMel_CAF1	10,206,796 – 10,206,916	- - - "knownCDS=Parent=FBtr0082940;Name=CG8489-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8489-RA" - - - - -	6030	10,206,796 – 10,206,916	-	6	120	73.61	-2.15	0.45	0.919447
3766	3R_DroMel_CAF1	10,217,078 – 10,217,194	- - - - - - - - -	6031	10,217,078 – 10,217,194	+	4	116	87.50	-1.47	0.73	0.553173
3766	3R_DroMel_CAF1	10,217,078 – 10,217,194	- - - - - - - - -	6032	10,217,078 – 10,217,194	-	4	116	87.50	-1.60	0.83	0.710164
3767	3R_DroMel_CAF1	10,222,082 – 10,222,190	- - - - - - - - -	6033	10,222,082 – 10,222,190	-	4	108	93.21	-2.18	0.86	0.926322
3768	3R_DroMel_CAF1	10,226,924 – 10,227,020	- - - - - - - - -	6034	10,226,924 – 10,227,020	-	5	96	92.87	-1.83	0.84	0.960688
3769	3R_DroMel_CAF1	10,228,507 – 10,228,597	- - - - - - - - -	6035	10,228,507 – 10,228,597	-	6	93	94.73	-1.18	0.91	0.748460
3770	3R_DroMel_CAF1	10,230,678 – 10,230,836	- - - "knownCDS=Parent=FBtr0082939;Name=RhoGAP88C-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31319-RA" - - - - -	6036	10,230,678 – 10,230,796	-	6	120	76.59	-1.72	0.63	0.878290
3770	3R_DroMel_CAF1	10,230,678 – 10,230,836		6037	10,230,716 – 10,230,836	-	6	120	87.50	-2.61	0.77	0.656968
3771	3R_DroMel_CAF1	10,233,599 – 10,233,733	- - - - - - - - -	6038	10,233,599 – 10,233,714	+	6	118	78.44	-2.15	0.55	0.858924
				6039	10,233,599 – 10,233,714	-	6	118	78.44	-1.87	0.54	0.668248
				6040	10,233,636 – 10,233,733	+	6	100	79.75	-1.94	0.67	0.875106
3772	3R_DroMel_CAF1	10,234,776 – 10,234,873	- - - "knownCDS=Parent=FBtr0082938;Name=CG14846-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14846-RA" - - - - -	6041	10,234,776 – 10,234,873	+	6	114	72.67	-1.83	0.48	0.801462
3772	3R_DroMel_CAF1	10,234,776 – 10,234,873		6042	10,234,776 – 10,234,873	-	6	114	72.67	-1.71	0.51	0.750850
3773	3R_DroMel_CAF1	10,236,116 – 10,236,221	- - - - - - - - -	6043	10,236,116 – 10,236,221	-	6	108	78.75	-1.79	0.59	0.745845
3774	3R_DroMel_CAF1	10,237,314 – 10,237,408	- - - - - - - - -	6044	10,237,314 – 10,237,408	+	5	99	95.42	-1.81	0.93	0.994776
3774	3R_DroMel_CAF1	10,237,314 – 10,237,408	- - - - - - - - -	6045	10,237,314 – 10,237,408	-	5	99	95.42	-1.21	0.93	0.744831
3775	3R_DroMel_CAF1	10,237,914 – 10,238,053	- - - - - - - - -	6046	10,237,914 – 10,238,015	-	6	109	84.27	-2.68	0.83	0.930099
3775	3R_DroMel_CAF1	10,237,914 – 10,238,053	- - - - - - - - -	6047	10,237,946 – 10,238,053	-	6	115	76.07	-1.95	0.63	0.950234
3776	3R_DroMel_CAF1	10,239,870 – 10,240,056	- - - - - - - - -	6048	10,239,870 – 10,239,964	+	6	99	77.46	-2.04	0.52	0.798264
				6049	10,239,905 – 10,240,000	-	6	98	80.95	-1.84	0.61	0.654520
				6050	10,239,964 – 10,240,056	+	5	92	90.33	-2.64	0.86	0.998991
3777	3R_DroMel_CAF1	10,244,518 – 10,244,608	- - - "knownCDS=Parent=FBtr0082934;Name=CG14842-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14842-RA" - - - - -	6051	10,244,518 – 10,244,608	+	6	120	74.89	-1.40	0.61	0.669356
3777	3R_DroMel_CAF1	10,244,518 – 10,244,608		6052	10,244,518 – 10,244,608	-	6	120	74.89	-1.39	0.57	0.500000
3778	3R_DroMel_CAF1	10,245,356 – 10,245,479	- - - - - - - - -	6053	10,245,356 – 10,245,450	+	6	102	74.46	-2.13	0.43	0.850165
				6054	10,245,356 – 10,245,450	-	6	102	74.46	-2.36	0.40	0.918604
				6055	10,245,385 – 10,245,479	+	6	104	81.61	-2.35	0.69	0.860090
3779	3R_DroMel_CAF1	10,249,479 – 10,249,643	- - "RNAmicro=f:10249544_t:10249656_strand:+_p:0.869376" - - - - - -	6056	10,249,479 – 10,249,572	+	4	101	77.21	-3.75	0.63	0.999898
				6057	10,249,479 – 10,249,572	-	4	101	77.21	-3.28	0.71	0.999868
				6058	10,249,504 – 10,249,612	+	6	112	76.63	-1.43	0.60	0.605688
				6059	10,249,504 – 10,249,612	-	6	112	76.63	-1.56	0.56	0.565603
				6060	10,249,544 – 10,249,643	+	6	113	78.24	-2.04	0.85	0.958003
				6061	10,249,544 – 10,249,643	-	6	113	78.24	-2.02	0.67	0.938137
3780	3R_DroMel_CAF1	10,250,370 – 10,250,460	- - - - - - - - -	6062	10,250,370 – 10,250,460	+	5	92	78.08	-1.95	0.71	0.936336
3781	3R_DroMel_CAF1	10,250,871 – 10,250,969	- - - - - - - - -	6063	10,250,871 – 10,250,969	+	6	100	76.89	-2.45	0.52	0.960826
3782	3R_DroMel_CAF1	10,250,999 – 10,251,091	- - - - - - - - -	6064	10,250,999 – 10,251,091	+	6	119	81.78	-1.96	0.84	0.880568
3782	3R_DroMel_CAF1	10,250,999 – 10,251,091	- - - - - - - - -	6065	10,250,999 – 10,251,091	-	6	119	81.78	-1.95	0.71	0.782003
3783	3R_DroMel_CAF1	10,252,958 – 10,253,109	- - - "knownCDS=Parent=FBtr0082936;Name=CG31330-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31330-RA" - - - - -	6066	10,252,958 – 10,253,069	-	4	117	82.32	-1.42	0.82	0.527953
3783	3R_DroMel_CAF1	10,252,958 – 10,253,109		6067	10,252,993 – 10,253,109	+	6	120	82.40	-1.55	0.70	0.574943
3784	3R_DroMel_CAF1	10,256,099 – 10,256,204	- - - - - - - - -	6068	10,256,099 – 10,256,204	+	5	118	68.30	-1.58	0.55	0.716595
3785	3R_DroMel_CAF1	10,264,240 – 10,264,410	- - - - - - - - -	6069	10,264,240 – 10,264,332	+	6	99	77.71	-1.99	0.52	0.746186
				6070	10,264,240 – 10,264,332	-	6	99	77.71	-2.01	0.58	0.881733
				6071	10,264,255 – 10,264,372	+	6	118	75.55	-3.30	0.44	0.997087
				6072	10,264,255 – 10,264,372	-	6	118	75.55	-3.03	0.40	0.990516
				6073	10,264,293 – 10,264,410	+	6	120	77.10	-1.69	0.53	0.526216
3786	3R_DroMel_CAF1	10,267,131 – 10,267,224	- - - - - - - - -	6074	10,267,131 – 10,267,224	+	3	93	81.40	-2.13	0.76	0.916885
3786	3R_DroMel_CAF1	10,267,131 – 10,267,224	- - - - - - - - -	6075	10,267,131 – 10,267,224	-	3	93	81.40	-2.99	0.83	0.994879
3787	3R_DroMel_CAF1	10,269,231 – 10,269,359	- - - - - - - - -	6076	10,269,231 – 10,269,325	-	6	101	82.36	-1.74	0.65	0.556926
				6077	10,269,252 – 10,269,359	+	6	111	78.45	-1.11	0.73	0.648542
				6078	10,269,252 – 10,269,359	-	6	111	78.45	-1.60	0.70	0.862582
3788	3R_DroMel_CAF1	10,272,042 – 10,272,135	- - - - - - - - -	6079	10,272,042 – 10,272,135	-	4	93	83.14	-1.51	0.80	0.589964
3789	3R_DroMel_CAF1	10,278,048 – 10,278,143	- - - - - - - - -	6080	10,278,048 – 10,278,143	+	5	105	75.89	-1.78	0.68	0.920431
3790	3R_DroMel_CAF1	10,283,732 – 10,283,864	- - - - - - - - -	6081	10,283,732 – 10,283,852	+	5	120	84.53	-1.81	0.75	0.740198
				6082	10,283,732 – 10,283,852	-	5	120	84.53	-1.71	0.66	0.511722
				6083	10,283,772 – 10,283,864	+	5	92	94.57	-1.66	0.97	0.994522
				6084	10,283,772 – 10,283,864	-	5	92	94.57	-1.73	0.91	0.986614
3791	3R_DroMel_CAF1	10,285,578 – 10,285,671	- - - - - - - - -	6085	10,285,578 – 10,285,671	+	5	96	77.37	-1.40	0.69	0.552411
3792	3R_DroMel_CAF1	10,293,227 – 10,293,326	- - - - - - - - -	6086	10,293,227 – 10,293,326	-	5	113	81.51	-2.14	0.64	0.866994
3793	3R_DroMel_CAF1	10,302,560 – 10,302,662	- - - - - - - - -	6087	10,302,560 – 10,302,662	-	6	116	81.97	-2.07	0.63	0.684007
3794	3R_DroMel_CAF1	10,303,786 – 10,303,876	- - - - - - - - -	6088	10,303,786 – 10,303,876	-	6	113	79.32	-1.41	0.62	0.512080
3795	3R_DroMel_CAF1	10,310,416 – 10,310,519	- - - - - - - - -	6089	10,310,416 – 10,310,519	-	6	116	78.16	-1.60	0.68	0.852212
3796	3R_DroMel_CAF1	10,310,927 – 10,311,021	- - - - - - - - -	6090	10,310,927 – 10,311,021	+	5	99	87.50	-1.78	0.68	0.509957
3797	3R_DroMel_CAF1	10,316,084 – 10,316,193	- - - - - - - - -	6091	10,316,084 – 10,316,193	-	6	120	80.96	-3.36	0.67	0.958728
3798	3R_DroMel_CAF1	10,318,274 – 10,318,377	- - - - - - - - -	6092	10,318,274 – 10,318,377	+	5	115	80.49	-1.72	0.84	0.853067
3799	3R_DroMel_CAF1	10,318,513 – 10,318,620	- - - - - - - - -	6093	10,318,513 – 10,318,620	+	5	109	93.66	-1.37	0.85	0.697692
3800	3R_DroMel_CAF1	10,321,760 – 10,321,860	- - - - - - - - -	6094	10,321,760 – 10,321,860	-	4	100	90.31	-2.96	0.82	0.980976
3801	3R_DroMel_CAF1	10,322,536 – 10,322,633	- - - - - - - - -	6095	10,322,536 – 10,322,633	+	6	98	78.77	-1.50	0.65	0.724621
3801	3R_DroMel_CAF1	10,322,536 – 10,322,633	- - - - - - - - -	6096	10,322,536 – 10,322,633	-	6	98	78.77	-2.25	0.51	0.815790
3802	3R_DroMel_CAF1	10,325,649 – 10,325,746	- - - - - - - - -	6097	10,325,649 – 10,325,746	-	6	120	79.43	-2.35	0.53	0.846753
3803	3R_DroMel_CAF1	10,326,872 – 10,326,973	- - - - - - - - -	6098	10,326,872 – 10,326,973	-	6	120	79.69	-1.24	0.74	0.665035
3804	3R_DroMel_CAF1	10,327,941 – 10,328,033	- - - - - - - - -	6099	10,327,941 – 10,328,033	-	5	92	75.76	-2.02	0.53	0.896823
3805	3R_DroMel_CAF1	10,330,160 – 10,330,256	- - - - - - - - -	6100	10,330,160 – 10,330,256	+	6	120	78.07	-2.48	0.59	0.965536
3806	3R_DroMel_CAF1	10,331,446 – 10,331,549	- - - - - - - - -	6101	10,331,446 – 10,331,549	+	5	104	92.17	-1.22	0.85	0.514704
3807	3R_DroMel_CAF1	10,332,416 – 10,332,521	- - - - - - - - -	6102	10,332,416 – 10,332,521	+	6	107	81.29	-2.55	0.47	0.557559
3808	3R_DroMel_CAF1	10,334,372 – 10,334,494	- - - - - - - - -	6103	10,334,372 – 10,334,462	+	6	90	91.14	-2.36	0.87	0.967731
3808	3R_DroMel_CAF1	10,334,372 – 10,334,494	- - - - - - - - -	6104	10,334,386 – 10,334,494	+	6	110	89.43	-2.86	0.84	0.963922
3809	3R_DroMel_CAF1	10,341,143 – 10,341,346	- - "RNAmicro=f:10341239_t:10341358_strand:+_p:0.927383" - - - - - -	6105	10,341,143 – 10,341,239	-	5	97	93.36	-1.42	0.80	0.534191
				6106	10,341,239 – 10,341,346	+	6	120	90.06	-4.72	0.76	0.988609
				6107	10,341,239 – 10,341,346	-	6	120	90.06	-5.26	0.80	0.997230
3810	3R_DroMel_CAF1	10,343,332 – 10,343,452	- - - "knownCDS=Parent=FBtr0082985;Name=Pde6-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8279-RA" - - - - -	6108	10,343,332 – 10,343,452	+	6	120	82.83	-1.35	0.75	0.500000
3811	3R_DroMel_CAF1	10,343,924 – 10,344,044	- - - "knownCDS=Parent=FBtr0082985;Name=Pde6-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8279-RA" - - - - -	6109	10,343,924 – 10,344,044	-	6	120	88.44	-1.99	0.80	0.535237
3812	3R_DroMel_CAF1	10,346,867 – 10,346,986	- - - "knownCDS=Parent=FBtr0082954;Name=Cyp313a1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3360-RA" - - - - -	6110	10,346,867 – 10,346,986	+	5	119	92.77	-1.56	0.78	0.609238
3813	3R_DroMel_CAF1	10,347,466 – 10,347,581	- - - - - - - - -	6111	10,347,466 – 10,347,581	-	5	120	86.50	-2.10	0.66	0.644350
3814	3R_DroMel_CAF1	10,347,887 – 10,348,007	- - - "knownCDS=Parent=FBtr0082954;Name=Cyp313a1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3360-RA" - - - - -	6112	10,347,887 – 10,348,007	-	5	120	88.50	-1.97	0.69	0.561293
3815	3R_DroMel_CAF1	10,359,884 – 10,359,975	- - - - - - - - -	6113	10,359,884 – 10,359,975	+	4	102	85.84	-1.38	0.78	0.500000
3816	3R_DroMel_CAF1	10,361,790 – 10,361,895	- - - - - - - - -	6114	10,361,790 – 10,361,895	+	5	105	86.45	-2.20	0.67	0.714475
3817	3R_DroMel_CAF1	10,367,805 – 10,367,896	- - - - - - - - -	6115	10,367,805 – 10,367,896	+	6	95	68.42	-2.55	0.51	0.995809
3818	3R_DroMel_CAF1	10,370,932 – 10,371,035	- - - - - - - - -	6116	10,370,932 – 10,371,035	+	6	106	81.15	-1.80	0.64	0.684297
3819	3R_DroMel_CAF1	10,371,249 – 10,371,343	- - - - - - - - -	6117	10,371,249 – 10,371,343	+	6	106	83.46	-2.24	0.73	0.739179
3819	3R_DroMel_CAF1	10,371,249 – 10,371,343	- - - - - - - - -	6118	10,371,249 – 10,371,343	-	6	106	83.46	-3.01	0.62	0.741191
3820	3R_DroMel_CAF1	10,371,506 – 10,371,599	- - - - - - - - -	6119	10,371,506 – 10,371,599	+	6	101	80.86	-2.24	0.53	0.642357
3821	3R_DroMel_CAF1	10,394,234 – 10,394,345	- - - "knownCDS=Parent=FBtr0082981;Name=CG8066-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8066-RA" - - - - -	6120	10,394,234 – 10,394,345	-	6	112	76.54	-1.57	0.58	0.634538
3822	3R_DroMel_CAF1	10,399,658 – 10,399,768	- - - "knownCDS=Parent=FBtr0082978, FBtr0082979;Name=CG7987-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7987-RA, FlyBase+Annotation+IDs:CG7987-RB" - - - - -	6121	10,399,658 – 10,399,768	-	6	110	82.73	-1.44	0.70	0.500000
3823	3R_DroMel_CAF1	10,419,363 – 10,419,494	- - - - - - - - -	6122	10,419,363 – 10,419,460	-	3	102	91.18	-1.73	0.91	0.666613
3823	3R_DroMel_CAF1	10,419,363 – 10,419,494	- - - - - - - - -	6123	10,419,388 – 10,419,494	-	4	114	83.88	-2.13	0.84	0.944796
3824	3R_DroMel_CAF1	10,425,572 – 10,425,671	- - - - - - - - -	6124	10,425,572 – 10,425,671	+	5	106	77.72	-3.05	0.60	0.998778
3824	3R_DroMel_CAF1	10,425,572 – 10,425,671	- - - - - - - - -	6125	10,425,572 – 10,425,671	-	5	106	77.72	-2.43	0.69	0.991105
3825	3R_DroMel_CAF1	10,425,784 – 10,425,890	- - - - - - - - -	6126	10,425,784 – 10,425,890	+	4	106	95.13	-1.54	0.87	0.538009
3826	3R_DroMel_CAF1	10,433,415 – 10,433,560	- - - - - - - - -	6127	10,433,415 – 10,433,528	+	5	113	91.42	-2.88	0.82	0.998097
				6128	10,433,415 – 10,433,528	-	5	113	91.42	-1.35	0.81	0.556798
				6129	10,433,454 – 10,433,560	+	5	106	95.28	-1.82	0.83	0.906580
3827	3R_DroMel_CAF1	10,434,412 – 10,434,562	- - - - - - - - -	6130	10,434,412 – 10,434,525	+	5	120	87.22	-2.59	0.77	0.976173
3827	3R_DroMel_CAF1	10,434,412 – 10,434,562	- - - - - - - - -	6131	10,434,452 – 10,434,562	+	5	120	83.07	-1.70	0.67	0.562344
3828	3R_DroMel_CAF1	10,435,371 – 10,435,474	- - - - - - - - -	6132	10,435,371 – 10,435,474	-	5	120	64.50	-2.32	0.55	0.993195
3829	3R_DroMel_CAF1	10,441,732 – 10,441,934	- - - "knownCDS=Parent=FBtr0082961;Name=CG14853-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14853-RA" - - - - -	6133	10,441,732 – 10,441,822	-	6	103	76.35	-1.70	0.53	0.608113
3829	3R_DroMel_CAF1	10,441,732 – 10,441,934		6134	10,441,822 – 10,441,934	-	6	117	76.98	-1.43	0.78	0.909835
3830	3R_DroMel_CAF1	10,442,998 – 10,443,093	- - - "knownCDS=Parent=FBtr0082960;Name=CG14853-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14853-RB" - - - - -	6135	10,442,998 – 10,443,093	-	6	96	79.20	-1.38	0.64	0.577074
3831	3R_DroMel_CAF1	10,446,650 – 10,446,758	- - - - - - - - -	6136	10,446,650 – 10,446,758	+	6	109	81.45	-2.45	0.74	0.907206
3831	3R_DroMel_CAF1	10,446,650 – 10,446,758	- - - - - - - - -	6137	10,446,650 – 10,446,758	-	6	109	81.45	-2.26	0.60	0.752846
3832	3R_DroMel_CAF1	10,451,164 – 10,451,256	- - - - - - - - -	6138	10,451,164 – 10,451,256	-	6	106	76.76	-1.58	0.75	0.935547
3833	3R_DroMel_CAF1	10,459,886 – 10,460,014	- - - - - - - - -	6139	10,459,886 – 10,459,987	+	6	101	81.68	-2.22	0.67	0.812989
				6140	10,459,921 – 10,460,014	+	5	102	86.13	-1.70	0.92	0.891571
				6141	10,459,921 – 10,460,014	-	5	102	86.13	-1.73	0.81	0.778669
3834	3R_DroMel_CAF1	10,464,008 – 10,464,128	- - - "knownCDS=Parent=FBtr0082965;Name=Cad88C-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3389-RA" - - - - -	6142	10,464,008 – 10,464,128	-	6	120	79.00	-2.05	0.48	0.500000
3835	3R_DroMel_CAF1	10,466,801 – 10,466,901	- - - - - - - - -	6143	10,466,801 – 10,466,901	-	6	110	77.67	-1.29	0.72	0.795539
3836	3R_DroMel_CAF1	10,471,166 – 10,471,475	- - - "knownCDS=Parent=FBtr0082975;Name=CG7832-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7832-RA" - - - - -	6144	10,471,166 – 10,471,273	-	3	108	73.99	-0.88	0.79	0.526659
				6145	10,471,202 – 10,471,313	-	6	116	77.46	-1.37	0.67	0.757998
				6146	10,471,235 – 10,471,353	-	6	120	83.31	-2.00	0.67	0.575006
				6147	10,471,353 – 10,471,444	-	6	94	84.49	-2.07	0.79	0.725435
				6148	10,471,382 – 10,471,475	-	6	95	88.26	-2.71	0.81	0.868023
3837	3R_DroMel_CAF1	10,471,541 – 10,471,646	- - - "knownCDS=Parent=FBtr0082975;Name=CG7832-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7832-RA" - - - - -	6149	10,471,541 – 10,471,646	-	6	114	73.51	-1.62	0.61	0.895989
3838	3R_DroMel_CAF1	10,471,728 – 10,471,830	- - - "knownCDS=Parent=FBtr0082975;Name=CG7832-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7832-RA" - - - - -	6150	10,471,728 – 10,471,830	-	6	108	83.97	-1.76	0.72	0.520710
3839	3R_DroMel_CAF1	10,472,657 – 10,472,756	- - - "knownCDS=Parent=FBtr0082975;Name=CG7832-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7832-RA" - - - - -	6151	10,472,657 – 10,472,756	+	6	105	82.71	-1.56	0.69	0.535879
3840	3R_DroMel_CAF1	10,472,896 – 10,472,986	- - - "knownCDS=Parent=FBtr0082975;Name=CG7832-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7832-RA" - - - - -	6152	10,472,896 – 10,472,986	-	6	111	68.56	-3.02	0.22	0.974507
3841	3R_DroMel_CAF1	10,476,489 – 10,476,585	- - - - - - - - -	6153	10,476,489 – 10,476,585	-	6	105	80.67	-1.45	0.67	0.612758
3842	3R_DroMel_CAF1	10,480,397 – 10,480,507	- - - - - - - - -	6154	10,480,397 – 10,480,490	-	4	93	94.62	-2.04	0.86	0.851420
3842	3R_DroMel_CAF1	10,480,397 – 10,480,507	- - - - - - - - -	6155	10,480,410 – 10,480,507	-	5	97	93.38	-2.06	0.80	0.934346
3843	3R_DroMel_CAF1	10,482,056 – 10,482,161	- - - - - - - - -	6156	10,482,056 – 10,482,161	+	5	120	70.18	-2.27	0.33	0.978960
3844	3R_DroMel_CAF1	10,482,780 – 10,482,913	- - - - - - - - -	6157	10,482,780 – 10,482,882	+	3	113	79.76	-2.57	0.85	0.995701
				6158	10,482,809 – 10,482,913	+	3	110	72.44	-3.46	0.78	0.999998
				6159	10,482,809 – 10,482,913	-	3	110	72.44	-2.59	0.63	0.999832
3845	3R_DroMel_CAF1	10,484,083 – 10,484,173	- - - - - - - - -	6160	10,484,083 – 10,484,173	+	6	95	78.28	-1.24	0.82	0.806489
3846	3R_DroMel_CAF1	10,486,132 – 10,486,246	- - - "knownCDS=Parent=FBtr0082967, FBtr0082968;Name=CG3508-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3508-RA, FlyBase+Annotation+IDs:CG3508-RB" - - - - -	6161	10,486,132 – 10,486,246	+	6	114	76.93	-1.57	0.64	0.827766
3847	3R_DroMel_CAF1	10,489,689 – 10,489,809	- - - "knownCDS=Parent=FBtr0082969;Name=CG3509-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3509-RA" - - - - -	6162	10,489,689 – 10,489,809	-	5	120	91.17	-1.70	0.77	0.720426
3848	3R_DroMel_CAF1	10,492,133 – 10,492,229	- - - "knownCDS=Parent=FBtr0100189;Name=Neu3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7649-RB" - - - - -	6163	10,492,133 – 10,492,229	+	6	102	72.92	-2.49	0.33	0.939010
3849	3R_DroMel_CAF1	10,494,037 – 10,494,140	- - - "knownCDS=Parent=FBtr0082973;Name=Neu3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7649-RA" - - - - -	6164	10,494,037 – 10,494,140	+	6	107	80.53	-1.21	0.69	0.520314
3849	3R_DroMel_CAF1	10,494,037 – 10,494,140		6165	10,494,037 – 10,494,140	-	6	107	80.53	-2.33	0.60	0.853906
3850	3R_DroMel_CAF1	10,498,649 – 10,498,772	- - - - - - - - -	6166	10,498,649 – 10,498,742	+	6	109	80.50	-2.63	0.58	0.903747
				6167	10,498,649 – 10,498,742	-	6	109	80.50	-3.42	0.55	0.966626
				6168	10,498,680 – 10,498,772	+	6	109	78.48	-2.38	0.55	0.923719
				6169	10,498,680 – 10,498,772	-	6	109	78.48	-2.18	0.53	0.831332
3851	3R_DroMel_CAF1	10,501,140 – 10,501,310	- - - - - - - - -	6170	10,501,140 – 10,501,230	+	4	111	85.08	-1.73	0.79	0.757696
3851	3R_DroMel_CAF1	10,501,140 – 10,501,310	- - - - - - - - -	6171	10,501,201 – 10,501,310	+	5	120	78.74	-2.33	0.51	0.932738
3852	3R_DroMel_CAF1	10,501,914 – 10,502,018	- - - - - - - - -	6172	10,501,914 – 10,502,018	+	5	106	80.47	-1.68	0.64	0.584542
3853	3R_DroMel_CAF1	10,502,372 – 10,502,466	- - - - - - - - -	6173	10,502,372 – 10,502,466	-	4	98	81.36	-1.98	0.72	0.881269
3854	3R_DroMel_CAF1	10,503,454 – 10,503,562	- - - - - - - - -	6174	10,503,454 – 10,503,562	+	6	115	78.61	-1.79	0.64	0.842583
3854	3R_DroMel_CAF1	10,503,454 – 10,503,562	- - - - - - - - -	6175	10,503,454 – 10,503,562	-	6	115	78.61	-1.90	0.58	0.795656
3855	3R_DroMel_CAF1	10,505,338 – 10,505,432	- - - - - - - - -	6176	10,505,338 – 10,505,432	+	5	96	81.52	-1.76	0.65	0.616382
3856	3R_DroMel_CAF1	10,505,632 – 10,505,729	- - - - - - - - -	6177	10,505,632 – 10,505,729	-	5	115	72.74	-0.75	0.77	0.751927
3857	3R_DroMel_CAF1	10,505,906 – 10,506,003	- - - - - - - - -	6178	10,505,906 – 10,506,003	+	5	103	75.43	-1.85	0.54	0.781275
3858	3R_DroMel_CAF1	10,507,685 – 10,507,795	- - - - - - - - -	6179	10,507,685 – 10,507,795	+	5	110	91.45	-1.63	0.76	0.598715
3859	3R_DroMel_CAF1	10,508,429 – 10,508,529	- - - - - - - - -	6180	10,508,429 – 10,508,529	+	6	116	77.52	-2.06	0.53	0.834184
3860	3R_DroMel_CAF1	10,511,536 – 10,511,630	- - - - - - - - -	6181	10,511,536 – 10,511,630	+	3	110	71.12	-1.90	0.52	0.698679
3861	3R_DroMel_CAF1	10,511,833 – 10,512,015	- - - - - - - - -	6182	10,511,833 – 10,511,948	+	5	115	82.65	-1.73	0.79	0.754940
				6183	10,511,868 – 10,511,979	+	5	113	78.80	-1.43	0.72	0.579536
				6184	10,511,908 – 10,512,015	+	5	109	91.88	-2.02	0.86	0.989928
3862	3R_DroMel_CAF1	10,514,736 – 10,514,842	- - - - - - - - -	6185	10,514,736 – 10,514,842	-	5	115	91.24	-1.90	0.72	0.580352
3863	3R_DroMel_CAF1	10,516,299 – 10,516,413	- - - - - - - - -	6186	10,516,299 – 10,516,413	+	6	120	74.27	-1.74	0.50	0.665828
3863	3R_DroMel_CAF1	10,516,299 – 10,516,413	- - - - - - - - -	6187	10,516,299 – 10,516,413	-	6	120	74.27	-2.24	0.36	0.797353
3864	3R_DroMel_CAF1	10,516,597 – 10,516,689	- - - - - - - - -	6188	10,516,597 – 10,516,689	+	5	103	79.57	-3.20	0.25	0.990909
3865	3R_DroMel_CAF1	10,518,193 – 10,518,353	- - - - - - - - -	6189	10,518,193 – 10,518,288	+	5	95	88.00	-1.58	0.83	0.750422
3865	3R_DroMel_CAF1	10,518,193 – 10,518,353	- - - - - - - - -	6190	10,518,253 – 10,518,353	+	6	117	78.30	-1.84	0.53	0.607470
3866	3R_DroMel_CAF1	10,522,160 – 10,522,319	- - - "knownCDS=Parent=FBtr0100189;Name=Neu3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7649-RB" - - - - -	6191	10,522,160 – 10,522,266	-	6	120	74.88	-1.60	0.55	0.636496
				6192	10,522,229 – 10,522,319	+	6	93	82.56	-1.68	0.65	0.512543
				6193	10,522,229 – 10,522,319	-	6	93	82.56	-1.36	0.83	0.572253
3867	3R_DroMel_CAF1	10,524,821 – 10,524,941	- - - "knownCDS=Parent=FBtr0100008;Name=CG33967-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33967-RA" - - - - -	6194	10,524,821 – 10,524,941	+	3	120	95.00	-2.02	0.90	0.735815
3867	3R_DroMel_CAF1	10,524,821 – 10,524,941		6195	10,524,821 – 10,524,941	-	3	120	95.00	-2.12	0.93	0.873292
3868	3R_DroMel_CAF1	10,526,165 – 10,526,301	- - - "knownCDS=Parent=FBtr0100008;Name=CG33967-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33967-RA" - - - - -	6196	10,526,165 – 10,526,261	-	6	105	77.12	-1.54	0.67	0.858482
3868	3R_DroMel_CAF1	10,526,165 – 10,526,301		6197	10,526,196 – 10,526,301	-	6	108	79.50	-2.04	0.51	0.597304
3869	3R_DroMel_CAF1	10,529,180 – 10,529,274	- - - - - - - - -	6198	10,529,180 – 10,529,274	+	4	95	90.57	-2.98	0.90	0.995817
3869	3R_DroMel_CAF1	10,529,180 – 10,529,274	- - - - - - - - -	6199	10,529,180 – 10,529,274	-	4	95	90.57	-2.39	0.87	0.976737
3870	3R_DroMel_CAF1	10,529,628 – 10,529,743	- - - - - - - - -	6200	10,529,628 – 10,529,743	+	5	115	91.13	-2.00	0.96	0.998765
3871	3R_DroMel_CAF1	10,531,436 – 10,531,529	- - - - - - - - -	6201	10,531,436 – 10,531,529	-	5	93	79.80	-1.54	0.67	0.529134
3872	3R_DroMel_CAF1	10,531,652 – 10,531,745	- - - - - - - - -	6202	10,531,652 – 10,531,745	-	5	101	81.91	-2.77	0.50	0.923249
3873	3R_DroMel_CAF1	10,532,330 – 10,532,483	- - - - - - - - -	6203	10,532,330 – 10,532,446	+	5	119	88.82	-2.84	0.68	0.833122
				6204	10,532,330 – 10,532,446	-	5	119	88.82	-2.55	0.70	0.842128
				6205	10,532,367 – 10,532,483	+	5	116	97.41	-2.94	0.90	0.999547
				6206	10,532,367 – 10,532,483	-	5	116	97.41	-2.73	0.87	0.996992
3874	3R_DroMel_CAF1	10,532,485 – 10,532,585	- - - - - - - - -	6207	10,532,485 – 10,532,585	+	3	105	86.71	-1.64	0.98	0.966561
3874	3R_DroMel_CAF1	10,532,485 – 10,532,585	- - - - - - - - -	6208	10,532,485 – 10,532,585	-	3	105	86.71	-0.67	0.96	0.521043
3875	3R_DroMel_CAF1	10,535,402 – 10,535,492	- - - - - - - - -	6209	10,535,402 – 10,535,492	-	6	92	69.92	-1.38	0.54	0.567591
3876	3R_DroMel_CAF1	10,540,906 – 10,541,040	- - - - - - - - -	6210	10,540,906 – 10,541,002	+	5	96	93.08	-2.01	0.88	0.994918
				6211	10,540,906 – 10,541,002	-	5	96	93.08	-3.89	0.90	0.999953
				6212	10,540,923 – 10,541,040	+	5	119	82.34	-1.95	0.74	0.853029
3877	3R_DroMel_CAF1	10,542,288 – 10,542,395	- - - - - - - - -	6213	10,542,288 – 10,542,395	-	3	117	89.68	-3.12	0.93	0.988332
3878	3R_DroMel_CAF1	10,548,672 – 10,548,786	- - - - - - - - -	6214	10,548,672 – 10,548,786	+	3	114	95.91	-2.06	0.83	0.505405
3879	3R_DroMel_CAF1	10,549,946 – 10,550,106	- - - - - - - - -	6215	10,549,946 – 10,550,066	+	3	120	96.11	-1.69	0.95	0.677907
				6216	10,549,946 – 10,550,066	-	3	120	96.11	-2.93	0.91	0.955756
				6217	10,549,986 – 10,550,106	+	3	120	95.56	-2.74	0.93	0.965817
				6218	10,549,986 – 10,550,106	-	3	120	95.56	-1.76	0.90	0.568367
3880	3R_DroMel_CAF1	10,550,131 – 10,550,239	- - - - - - - - -	6219	10,550,131 – 10,550,239	+	3	108	88.58	-2.26	0.78	0.695684
3881	3R_DroMel_CAF1	10,552,585 – 10,552,716	- - - - - - - - -	6220	10,552,585 – 10,552,695	+	6	119	79.64	-1.61	0.70	0.808784
				6221	10,552,585 – 10,552,695	-	6	119	79.64	-2.44	0.72	0.951869
				6222	10,552,618 – 10,552,716	-	5	101	80.99	-1.56	0.69	0.547290
3882	3R_DroMel_CAF1	10,557,849 – 10,557,956	- - - - - - - - -	6223	10,557,849 – 10,557,956	+	5	120	80.36	-1.87	0.56	0.572913
3883	3R_DroMel_CAF1	10,558,787 – 10,558,884	- - "RNAmicro=f:10558787_t:10558903_strand:+_p:0.524131" - - - - - -	6224	10,558,787 – 10,558,884	+	6	117	69.45	-1.49	0.67	0.945960
3883	3R_DroMel_CAF1	10,558,787 – 10,558,884		6225	10,558,787 – 10,558,884	-	6	117	69.45	-1.25	0.62	0.747512
3884	3R_DroMel_CAF1	10,559,490 – 10,559,635	- - - "knownCDS=Parent=FBtr0083018;Name=eff-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7425-RA" - - - "ncRNAdb=MmuscAK052915_unclassifiable\|1e-07" -	6226	10,559,490 – 10,559,610	-	6	120	94.39	-1.19	0.94	0.895401
3884	3R_DroMel_CAF1	10,559,490 – 10,559,635		6227	10,559,530 – 10,559,635	+	6	116	79.67	-1.08	0.89	0.590030
3885	3R_DroMel_CAF1	10,569,555 – 10,569,660	- - - - - - - - -	6228	10,569,555 – 10,569,660	+	6	118	73.24	-3.03	0.59	0.997907
3886	3R_DroMel_CAF1	10,572,124 – 10,572,243	- - - "knownCDS=Parent=FBtr0083016, FBtr0083017;Name=smp-30-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7390-RA, FlyBase+Annotation+IDs:CG7390-RB" - - - - -	6229	10,572,124 – 10,572,243	-	6	120	79.66	-1.33	0.66	0.589984
3887	3R_DroMel_CAF1	10,579,099 – 10,579,204	- - - "knownCDS=Parent=FBtr0083015;Name=CG7362-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7362-RA" - - - - -	6230	10,579,099 – 10,579,204	+	5	105	93.81	-1.24	0.88	0.649202
3887	3R_DroMel_CAF1	10,579,099 – 10,579,204		6231	10,579,099 – 10,579,204	-	5	105	93.81	-1.39	0.88	0.841820
3888	3R_DroMel_CAF1	10,579,644 – 10,579,764	- - - "knownCDS=Parent=FBtr0083015;Name=CG7362-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7362-RA" - - - - -	6232	10,579,644 – 10,579,764	-	5	120	87.58	-1.85	0.77	0.807371
3889	3R_DroMel_CAF1	10,583,234 – 10,583,424	- - - - - - - - -	6233	10,583,234 – 10,583,328	-	6	97	84.38	-2.54	0.74	0.745657
3889	3R_DroMel_CAF1	10,583,234 – 10,583,424	- - - - - - - - -	6234	10,583,328 – 10,583,424	+	5	97	90.87	-2.03	0.72	0.659872
3890	3R_DroMel_CAF1	10,591,558 – 10,591,656	- - - - - - - - -	6235	10,591,558 – 10,591,656	+	5	98	94.99	-1.93	0.90	0.995152
3891	3R_DroMel_CAF1	10,594,425 – 10,594,534	- - - - - - - - -	6236	10,594,425 – 10,594,534	-	5	110	95.45	-1.62	0.85	0.861095
3892	3R_DroMel_CAF1	10,596,596 – 10,596,714	- - - - - - - - -	6237	10,596,596 – 10,596,714	+	3	118	81.14	-2.39	0.69	0.941503
3893	3R_DroMel_CAF1	10,598,360 – 10,598,451	- - - - - - - - -	6238	10,598,360 – 10,598,451	+	6	96	87.48	-2.23	0.84	0.843292
3894	3R_DroMel_CAF1	10,601,164 – 10,601,255	- - - - - - - - -	6239	10,601,164 – 10,601,255	-	5	91	94.07	-2.02	0.88	0.993892
3895	3R_DroMel_CAF1	10,604,118 – 10,604,226	- - - - - - - - -	6240	10,604,118 – 10,604,226	+	6	108	88.99	-2.05	0.83	0.739939
3896	3R_DroMel_CAF1	10,606,023 – 10,606,113	- - - - - - - - -	6241	10,606,023 – 10,606,113	+	3	97	65.43	-1.65	0.55	0.931653
3897	3R_DroMel_CAF1	10,614,125 – 10,614,215	- - - "knownCDS=Parent=FBtr0082989;Name=CG3563-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3563-RB" - - - - -	6242	10,614,125 – 10,614,215	+	6	120	79.62	-0.94	0.78	0.500000
3898	3R_DroMel_CAF1	10,614,550 – 10,614,667	- - - "knownCDS=Parent=FBtr0082988;Name=CG3563-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3563-RA" - - - - -	6243	10,614,550 – 10,614,667	+	6	120	92.88	-2.17	0.82	0.735413
3899	3R_DroMel_CAF1	10,616,707 – 10,616,802	- - - "knownCDS=Parent=FBtr0082988;Name=CG3563-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3563-RA" - - - - -	6244	10,616,707 – 10,616,802	+	6	105	82.64	-1.79	0.72	0.662488
3900	3R_DroMel_CAF1	10,617,449 – 10,617,563	- - - - - - - - -	6245	10,617,449 – 10,617,563	-	5	120	83.16	-2.45	0.49	0.614017
3901	3R_DroMel_CAF1	10,620,583 – 10,620,697	- - - "knownCDS=Parent=FBtr0082990;Name=CG33330-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33330-RA" - - - - -	6246	10,620,583 – 10,620,697	+	6	120	71.17	-1.99	0.37	0.767515
3901	3R_DroMel_CAF1	10,620,583 – 10,620,697		6247	10,620,583 – 10,620,697	-	6	120	71.17	-1.81	0.37	0.500000
3902	3R_DroMel_CAF1	10,632,896 – 10,632,988	- - - "knownCDS=Parent=FBtr0091529, FBtr0091530;Name=btsz-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33555-RA, FlyBase+Annotation+IDs:CG33555-RB" - - - - -	6248	10,632,896 – 10,632,988	-	6	116	72.96	-1.45	0.62	0.831450
3903	3R_DroMel_CAF1	10,634,988 – 10,635,105	- - - - - - - - -	6249	10,634,988 – 10,635,105	+	6	120	87.23	-2.12	0.79	0.560295
3903	3R_DroMel_CAF1	10,634,988 – 10,635,105	- - - - - - - - -	6250	10,634,988 – 10,635,105	-	6	120	87.23	-1.69	0.86	0.672561
3904	3R_DroMel_CAF1	10,635,481 – 10,635,578	- - - - - - - - -	6251	10,635,481 – 10,635,578	-	6	103	79.53	-2.43	0.42	0.538428
3905	3R_DroMel_CAF1	10,635,895 – 10,635,989	- - - - - - - - -	6252	10,635,895 – 10,635,989	-	6	104	80.69	-2.08	0.59	0.733663
3906	3R_DroMel_CAF1	10,639,471 – 10,639,570	- - - - - - - - -	6253	10,639,471 – 10,639,570	+	6	100	78.72	-1.13	0.67	0.500000
3907	3R_DroMel_CAF1	10,649,583 – 10,649,682	- - - "knownCDS=Parent=FBtr0091529, FBtr0091530;Name=btsz-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33555-RA, FlyBase+Annotation+IDs:CG33555-RB" - - - - -	6254	10,649,583 – 10,649,682	-	6	120	81.54	-1.30	0.72	0.551670
3908	3R_DroMel_CAF1	10,653,451 – 10,653,560	- - - - - - - - -	6255	10,653,451 – 10,653,560	+	6	111	81.09	-1.22	0.71	0.532609
3909	3R_DroMel_CAF1	10,653,617 – 10,653,708	- - - - - - - - -	6256	10,653,617 – 10,653,708	+	6	102	76.48	-2.46	0.40	0.866640
3910	3R_DroMel_CAF1	10,654,182 – 10,654,352	- - - - - - - - -	6257	10,654,182 – 10,654,282	+	4	111	86.34	-1.49	0.69	0.533813
				6258	10,654,182 – 10,654,282	-	4	111	86.34	-1.65	0.72	0.656970
				6259	10,654,213 – 10,654,321	+	5	119	83.53	-1.85	0.71	0.724491
				6260	10,654,213 – 10,654,321	-	5	119	83.53	-2.74	0.76	0.988474
				6261	10,654,242 – 10,654,352	-	5	110	78.36	-1.85	0.59	0.731087
3911	3R_DroMel_CAF1	10,654,387 – 10,654,482	- - - - - - - - -	6262	10,654,387 – 10,654,482	+	6	114	80.42	-1.34	0.68	0.582757
3912	3R_DroMel_CAF1	10,657,017 – 10,657,119	- - - - - - - - -	6263	10,657,017 – 10,657,119	-	4	105	88.48	-1.42	0.79	0.542820
3913	3R_DroMel_CAF1	10,658,827 – 10,658,959	- - - - - - - - -	6264	10,658,827 – 10,658,922	+	3	119	86.09	-1.75	0.78	0.522773
				6265	10,658,827 – 10,658,922	-	3	119	86.09	-2.44	0.84	0.915372
				6266	10,658,847 – 10,658,959	+	3	117	96.01	-3.20	0.94	0.983986
				6267	10,658,847 – 10,658,959	-	3	117	96.01	-2.04	0.99	0.925976
3914	3R_DroMel_CAF1	10,658,965 – 10,659,065	- - - - - - - - -	6268	10,658,965 – 10,659,065	+	3	100	98.67	-1.93	0.91	0.690000
3914	3R_DroMel_CAF1	10,658,965 – 10,659,065	- - - - - - - - -	6269	10,658,965 – 10,659,065	-	3	100	98.67	-1.79	1.00	0.837741
3915	3R_DroMel_CAF1	10,659,160 – 10,659,340	- - - - - - - - -	6270	10,659,160 – 10,659,279	+	3	119	97.76	-1.76	0.94	0.681813
				6271	10,659,160 – 10,659,279	-	3	119	97.76	-2.04	0.93	0.799235
				6272	10,659,240 – 10,659,340	+	3	100	96.00	-2.08	0.95	0.882971
3916	3R_DroMel_CAF1	10,660,145 – 10,660,255	- - - - - - - - -	6273	10,660,145 – 10,660,255	+	3	110	97.56	-2.46	0.99	0.975070
3917	3R_DroMel_CAF1	10,660,519 – 10,660,619	- - - - - - - - -	6274	10,660,519 – 10,660,619	+	3	100	96.67	-2.60	0.96	0.968096
3918	3R_DroMel_CAF1	10,660,657 – 10,660,756	- - - - - - - - -	6275	10,660,657 – 10,660,756	-	3	100	98.00	-1.73	1.00	0.812751
3919	3R_DroMel_CAF1	10,661,697 – 10,661,830	- - - - - - - - -	6276	10,661,697 – 10,661,817	+	3	120	93.22	-3.25	0.94	0.988138
				6277	10,661,697 – 10,661,817	-	3	120	93.22	-2.75	0.94	0.977503
				6278	10,661,737 – 10,661,830	-	3	93	98.57	-1.67	0.93	0.588731
3920	3R_DroMel_CAF1	10,662,223 – 10,662,331	- - - - - - - - -	6279	10,662,223 – 10,662,331	+	4	108	87.87	-3.06	0.73	0.957221
3921	3R_DroMel_CAF1	10,662,553 – 10,662,667	- - - - - - - - -	6280	10,662,553 – 10,662,667	-	4	114	93.12	-2.15	0.91	0.963343
3922	3R_DroMel_CAF1	10,663,249 – 10,663,408	- - - - - - - - -	6281	10,663,249 – 10,663,369	-	4	120	74.62	-1.71	0.60	0.687037
3922	3R_DroMel_CAF1	10,663,249 – 10,663,408	- - - - - - - - -	6282	10,663,289 – 10,663,408	-	4	120	78.10	-2.20	0.62	0.940930
3923	3R_DroMel_CAF1	10,663,690 – 10,663,810	- - - - - - - - -	6283	10,663,690 – 10,663,810	+	4	120	90.83	-1.65	0.80	0.665594
3924	3R_DroMel_CAF1	10,664,236 – 10,664,472	- - - - - - - - -	6284	10,664,236 – 10,664,340	-	5	120	86.90	-1.88	0.83	0.902994
				6285	10,664,340 – 10,664,447	+	4	114	87.50	-2.07	0.70	0.785301
				6286	10,664,340 – 10,664,447	-	4	114	87.50	-3.14	0.69	0.939021
				6287	10,664,380 – 10,664,472	+	4	106	82.42	-3.13	0.73	0.996687
				6288	10,664,380 – 10,664,472	-	4	106	82.42	-3.85	0.69	0.998467
3925	3R_DroMel_CAF1	10,665,348 – 10,665,483	- - - - - - - - -	6289	10,665,348 – 10,665,445	+	4	110	88.58	-1.40	0.81	0.543223
3925	3R_DroMel_CAF1	10,665,348 – 10,665,483	- - - - - - - - -	6290	10,665,381 – 10,665,483	-	4	115	88.65	-2.15	0.70	0.755244
3926	3R_DroMel_CAF1	10,666,192 – 10,666,309	- - - - - - - - -	6291	10,666,192 – 10,666,309	+	5	120	91.88	-1.89	0.76	0.744282
3927	3R_DroMel_CAF1	10,666,608 – 10,666,718	- - - - - - - - -	6292	10,666,608 – 10,666,718	-	4	112	96.85	-1.95	0.91	0.792342
3928	3R_DroMel_CAF1	10,667,208 – 10,667,316	- - - - - - - - -	6293	10,667,208 – 10,667,316	+	5	108	96.85	-2.00	0.89	0.989614
3929	3R_DroMel_CAF1	10,667,413 – 10,667,508	- - - - - - - - -	6294	10,667,413 – 10,667,508	+	5	101	92.63	-2.08	0.80	0.939247
3930	3R_DroMel_CAF1	10,667,695 – 10,667,786	- - - - - - - - -	6295	10,667,695 – 10,667,786	-	5	95	92.49	-1.48	0.78	0.530569
3931	3R_DroMel_CAF1	10,667,819 – 10,667,939	- - - - - - - - -	6296	10,667,819 – 10,667,939	+	5	120	91.75	-2.68	0.77	0.971051
3932	3R_DroMel_CAF1	10,667,979 – 10,668,085	- - - - - - - - -	6297	10,667,979 – 10,668,085	+	5	120	73.59	-2.13	0.51	0.965288
3932	3R_DroMel_CAF1	10,667,979 – 10,668,085	- - - - - - - - -	6298	10,667,979 – 10,668,085	-	5	120	73.59	-2.09	0.57	0.970474
3933	3R_DroMel_CAF1	10,669,060 – 10,669,154	- - - - - - - - -	6299	10,669,060 – 10,669,154	+	5	94	95.82	-1.72	0.83	0.834055
3934	3R_DroMel_CAF1	10,670,026 – 10,670,122	- - - - - - - - -	6300	10,670,026 – 10,670,122	-	4	98	91.44	-1.55	0.82	0.621780
3935	3R_DroMel_CAF1	10,670,324 – 10,670,484	- - - - - - - - -	6301	10,670,324 – 10,670,444	-	4	120	94.09	-2.32	0.89	0.957542
3935	3R_DroMel_CAF1	10,670,324 – 10,670,484	- - - - - - - - -	6302	10,670,364 – 10,670,484	-	5	120	93.23	-1.16	0.88	0.513177
3936	3R_DroMel_CAF1	10,671,254 – 10,671,454	- - - "knownCDS=Parent=FBtr0082994;Name=CG3610-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3610-RA" - - - - -	6303	10,671,254 – 10,671,374	+	5	120	93.58	-1.17	0.87	0.500000
3936	3R_DroMel_CAF1	10,671,254 – 10,671,454		6304	10,671,334 – 10,671,454	-	5	120	92.33	-1.70	0.83	0.893813
3937	3R_DroMel_CAF1	10,671,774 – 10,672,094	- - - "knownCDS=Parent=FBtr0082994;Name=CG3610-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3610-RA" - - - - -	6305	10,671,774 – 10,671,894	+	5	120	93.00	-2.31	0.82	0.985691
				6306	10,671,814 – 10,671,934	+	5	120	92.67	-2.18	0.82	0.976665
				6307	10,671,814 – 10,671,934	-	5	120	92.67	-1.45	0.83	0.717208
				6308	10,671,854 – 10,671,974	+	5	120	93.42	-1.71	0.87	0.961466
				6309	10,671,974 – 10,672,094	-	5	120	95.50	-2.01	0.87	0.989125
3938	3R_DroMel_CAF1	10,672,470 – 10,672,561	- - - - - - - - -	6310	10,672,470 – 10,672,561	-	4	109	77.46	-1.63	0.82	0.876936
3939	3R_DroMel_CAF1	10,673,549 – 10,673,658	- - - - - - - - -	6311	10,673,549 – 10,673,658	-	5	109	93.39	-1.31	0.93	0.869414
3940	3R_DroMel_CAF1	10,674,009 – 10,674,108	- - - - - - - - -	6312	10,674,009 – 10,674,108	+	3	103	95.41	-1.62	0.91	0.500000
3941	3R_DroMel_CAF1	10,674,345 – 10,674,453	- - - - - - - - -	6313	10,674,345 – 10,674,453	+	5	118	93.59	-1.69	0.89	0.971854
3941	3R_DroMel_CAF1	10,674,345 – 10,674,453	- - - - - - - - -	6314	10,674,345 – 10,674,453	-	5	118	93.59	-1.48	0.85	0.829369
3942	3R_DroMel_CAF1	10,675,008 – 10,675,180	- - - - - - - - -	6315	10,675,008 – 10,675,107	+	5	100	92.50	-2.00	0.81	0.943889
				6316	10,675,008 – 10,675,107	-	5	100	92.50	-2.78	0.91	0.999913
				6317	10,675,047 – 10,675,146	+	6	120	79.37	-1.78	0.69	0.863515
				6318	10,675,047 – 10,675,146	-	6	120	79.37	-3.63	0.75	0.974549
				6319	10,675,073 – 10,675,180	+	6	120	80.42	-2.98	0.64	0.954636
				6320	10,675,073 – 10,675,180	-	6	120	80.42	-2.45	0.66	0.921450
3943	3R_DroMel_CAF1	10,675,486 – 10,675,597	- - - - - - - - -	6321	10,675,486 – 10,675,597	+	5	113	87.24	-1.43	0.85	0.581401
3944	3R_DroMel_CAF1	10,675,745 – 10,675,836	- - - - - - - - -	6322	10,675,745 – 10,675,836	+	5	92	95.84	-1.15	0.94	0.670455
3944	3R_DroMel_CAF1	10,675,745 – 10,675,836	- - - - - - - - -	6323	10,675,745 – 10,675,836	-	5	92	95.84	-1.51	0.81	0.500000
3945	3R_DroMel_CAF1	10,676,240 – 10,676,347	- - - - - - - - -	6324	10,676,240 – 10,676,347	-	6	120	82.51	-2.13	0.70	0.756611
3946	3R_DroMel_CAF1	10,676,692 – 10,676,840	- - - - - - - - -	6325	10,676,692 – 10,676,809	+	5	120	92.08	-2.11	0.80	0.958880
3946	3R_DroMel_CAF1	10,676,692 – 10,676,840	- - - - - - - - -	6326	10,676,732 – 10,676,840	+	5	111	92.12	-2.14	0.79	0.944538
3947	3R_DroMel_CAF1	10,677,281 – 10,677,401	- - - - - - - - -	6327	10,677,281 – 10,677,401	+	5	120	86.50	-1.97	0.76	0.834557
3948	3R_DroMel_CAF1	10,677,476 – 10,677,596	- - - - - - - - -	6328	10,677,476 – 10,677,596	+	4	120	95.00	-1.74	0.92	0.818115
3949	3R_DroMel_CAF1	10,678,257 – 10,678,377	- - - - - - - - -	6329	10,678,257 – 10,678,349	+	5	92	97.83	-1.77	0.98	0.992594
				6330	10,678,257 – 10,678,349	-	5	92	97.83	-2.46	0.97	0.999691
				6331	10,678,269 – 10,678,377	+	5	120	93.97	-1.08	0.95	0.610659
3950	3R_DroMel_CAF1	10,679,191 – 10,679,305	- - - - - - - - -	6332	10,679,191 – 10,679,305	-	5	118	92.77	-1.48	0.83	0.756553
3951	3R_DroMel_CAF1	10,681,280 – 10,681,437	- - - - - - - - -	6333	10,681,280 – 10,681,397	+	5	120	96.05	-2.14	0.76	0.580464
3951	3R_DroMel_CAF1	10,681,280 – 10,681,437	- - - - - - - - -	6334	10,681,317 – 10,681,437	+	5	120	93.46	-1.92	0.85	0.978070
3952	3R_DroMel_CAF1	10,682,850 – 10,682,958	- - - - - - - - -	6335	10,682,850 – 10,682,958	+	6	108	93.46	-1.46	0.92	0.939680
3953	3R_DroMel_CAF1	10,693,253 – 10,693,359	- - - - - - - - -	6336	10,693,253 – 10,693,359	-	6	108	87.84	-2.13	0.79	0.534136
3954	3R_DroMel_CAF1	10,693,463 – 10,693,599	- - - - - - - - -	6337	10,693,463 – 10,693,569	+	5	114	92.58	-1.64	0.82	0.837375
3954	3R_DroMel_CAF1	10,693,463 – 10,693,599	- - - - - - - - -	6338	10,693,494 – 10,693,599	+	5	117	88.11	-1.83	0.77	0.797472
3955	3R_DroMel_CAF1	10,700,223 – 10,700,324	- - - - - - - - -	6339	10,700,223 – 10,700,324	+	6	105	73.59	-1.59	0.51	0.554990
3955	3R_DroMel_CAF1	10,700,223 – 10,700,324	- - - - - - - - -	6340	10,700,223 – 10,700,324	-	6	105	73.59	-2.40	0.34	0.902533
3956	3R_DroMel_CAF1	10,701,137 – 10,701,232	- - - - - - - - -	6341	10,701,137 – 10,701,232	+	5	98	94.92	-1.52	0.95	0.979844
3957	3R_DroMel_CAF1	10,705,097 – 10,705,270	- - - - - - - - -	6342	10,705,097 – 10,705,196	-	3	100	73.58	-1.91	0.60	0.945974
				6343	10,705,117 – 10,705,235	-	3	120	79.89	-2.24	0.71	0.958461
				6344	10,705,157 – 10,705,270	-	3	115	93.00	-1.79	0.89	0.610874
3958	3R_DroMel_CAF1	10,708,415 – 10,708,509	- - - - - - - - -	6345	10,708,415 – 10,708,509	-	6	97	84.66	-1.50	0.86	0.596886
3959	3R_DroMel_CAF1	10,709,049 – 10,709,148	- - - "knownCDS=Parent=FBtr0083011;Name=Rrp6-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7292-RA" - - - - -	6346	10,709,049 – 10,709,148	+	6	100	78.05	-1.56	0.58	0.586527
3960	3R_DroMel_CAF1	10,715,577 – 10,715,697	- - - "knownCDS=Parent=FBtr0083010;Name=CycC-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7281-RA" - - - - -	6347	10,715,577 – 10,715,697	-	6	120	81.61	-1.90	0.59	0.551712
3961	3R_DroMel_CAF1	10,716,915 – 10,717,032	- - - "knownCDS=Parent=FBtr0083000, FBtr0083001;Name=CG3731-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3731-RA, FlyBase+Annotation+IDs:CG3731-RB" - - - - -	6348	10,716,915 – 10,717,032	+	6	120	79.92	-1.42	0.64	0.571816
3962	3R_DroMel_CAF1	10,720,988 – 10,721,342	- - - "knownCDS=Parent=FBtr0083002;Name=CG14860-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14860-RA" - - - - -	6349	10,720,988 – 10,721,105	+	5	120	93.25	-1.50	0.81	0.689656
				6350	10,721,028 – 10,721,145	+	5	120	94.17	-1.80	0.96	0.997734
				6351	10,721,028 – 10,721,145	-	5	120	94.17	-1.29	0.92	0.829746
				6352	10,721,068 – 10,721,185	+	5	120	92.50	-2.67	0.74	0.901451
				6353	10,721,068 – 10,721,185	-	5	120	92.50	-2.24	0.71	0.573585
				6354	10,721,185 – 10,721,305	+	5	120	89.85	-1.86	0.73	0.659469
				6355	10,721,185 – 10,721,305	-	5	120	89.85	-1.70	0.82	0.853345
				6356	10,721,225 – 10,721,342	-	5	120	87.80	-1.89	0.68	0.536016
3963	3R_DroMel_CAF1	10,721,419 – 10,721,572	- - - "knownCDS=Parent=FBtr0083008;Name=CG7262-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7262-RA" - - - - -	6357	10,721,419 – 10,721,532	+	5	113	91.67	-1.49	0.83	0.752883
3963	3R_DroMel_CAF1	10,721,419 – 10,721,572		6358	10,721,459 – 10,721,572	+	5	113	93.45	-1.37	0.92	0.909657
3964	3R_DroMel_CAF1	10,722,771 – 10,722,931	- - - "knownCDS=Parent=FBtr0083008;Name=CG7262-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7262-RA" - - - - -	6359	10,722,771 – 10,722,891	-	5	120	96.33	-1.57	0.90	0.930529
3964	3R_DroMel_CAF1	10,722,771 – 10,722,931		6360	10,722,811 – 10,722,931	-	5	120	95.67	-1.59	0.92	0.969583
3965	3R_DroMel_CAF1	10,723,011 – 10,723,131	- - - "knownCDS=Parent=FBtr0083008;Name=CG7262-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7262-RA" - - - - -	6361	10,723,011 – 10,723,131	-	5	120	91.58	-2.63	0.81	0.994774
3966	3R_DroMel_CAF1	10,726,997 – 10,727,105	- - - "knownCDS=Parent=FBtr0083006;Name=RpS5b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7014-RA" - - - - -	6362	10,726,997 – 10,727,105	-	6	111	79.20	-1.81	0.59	0.714718
3967	3R_DroMel_CAF1	10,728,289 – 10,728,390	- - "RNAmicro=f:10728289_t:10728397_strand:+_p:0.999935" - - - - - -	6363	10,728,289 – 10,728,390	+	6	109	78.43	-3.63	0.72	0.983796
3967	3R_DroMel_CAF1	10,728,289 – 10,728,390		6364	10,728,289 – 10,728,390	-	6	109	78.43	-3.89	0.90	0.963065
3968	3R_DroMel_CAF1	10,729,208 – 10,729,325	- - - "knownCDS=Parent=FBtr0083005;Name=VhaPPA1-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7007-RA" - - - - -	6365	10,729,208 – 10,729,325	-	6	120	79.21	-1.63	0.64	0.741679
3969	3R_DroMel_CAF1	10,738,740 – 10,738,832	- - - - - - - - -	6366	10,738,740 – 10,738,832	-	5	98	84.53	-1.52	0.74	0.500000
3970	3R_DroMel_CAF1	10,744,648 – 10,744,760	- - - "knownCDS=Parent=FBtr0083004;Name=CG3837-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3837-RA" - - - - -	6367	10,744,648 – 10,744,760	-	6	115	80.83	-1.70	0.60	0.567089
3971	3R_DroMel_CAF1	10,749,528 – 10,749,621	- - - - - - - - -	6368	10,749,528 – 10,749,621	+	5	115	61.52	-1.67	0.43	0.602520
3972	3R_DroMel_CAF1	10,750,240 – 10,750,451	- - - - - - - - -	6369	10,750,240 – 10,750,350	-	6	110	97.76	-1.32	0.90	0.782471
3972	3R_DroMel_CAF1	10,750,240 – 10,750,451	- - - - - - - - -	6370	10,750,350 – 10,750,451	-	5	107	86.92	-1.39	0.92	0.642956
3973	3R_DroMel_CAF1	10,756,658 – 10,756,760	- - - - - - - - -	6371	10,756,658 – 10,756,760	-	5	110	81.78	-2.15	0.59	0.783548
3974	3R_DroMel_CAF1	10,758,649 – 10,758,754	- - - - - - - - -	6372	10,758,649 – 10,758,754	-	6	120	79.13	-1.25	0.67	0.564550
3975	3R_DroMel_CAF1	10,761,089 – 10,761,183	- - - - - - - - -	6373	10,761,089 – 10,761,183	-	6	95	91.90	-1.42	0.86	0.505761
3976	3R_DroMel_CAF1	10,763,445 – 10,763,539	- - - - - - - - -	6374	10,763,445 – 10,763,539	+	5	109	82.34	-1.47	0.74	0.500000
3977	3R_DroMel_CAF1	10,769,414 – 10,769,515	- - - - - - - - -	6375	10,769,414 – 10,769,515	+	6	102	83.09	-2.93	0.58	0.699110
3978	3R_DroMel_CAF1	10,775,534 – 10,775,641	- - - - - - - - -	6376	10,775,534 – 10,775,627	+	6	120	77.60	-1.43	0.70	0.832830
				6377	10,775,534 – 10,775,627	-	6	120	77.60	-1.91	0.63	0.914630
				6378	10,775,548 – 10,775,641	+	6	120	76.19	-1.60	0.71	0.933773
				6379	10,775,548 – 10,775,641	-	6	120	76.19	-1.58	0.66	0.879028
3979	3R_DroMel_CAF1	10,791,320 – 10,791,480	- - - - - - - - -	6380	10,791,320 – 10,791,422	-	6	105	82.28	-1.52	0.77	0.645414
3979	3R_DroMel_CAF1	10,791,320 – 10,791,480	- - - - - - - - -	6381	10,791,388 – 10,791,480	+	6	103	75.72	-2.68	0.32	0.883086
3980	3R_DroMel_CAF1	10,800,321 – 10,800,417	- - - - - - - - -	6382	10,800,321 – 10,800,417	+	5	101	86.83	-1.66	0.70	0.505436
3981	3R_DroMel_CAF1	10,801,624 – 10,801,725	- - - - - - - - -	6383	10,801,624 – 10,801,725	+	5	103	91.41	-1.40	0.90	0.852667
3982	3R_DroMel_CAF1	10,803,752 – 10,803,867	- - - - - - - - -	6384	10,803,752 – 10,803,867	+	5	115	90.67	-1.48	0.88	0.853696
3982	3R_DroMel_CAF1	10,803,752 – 10,803,867	- - - - - - - - -	6385	10,803,752 – 10,803,867	-	5	115	90.67	-2.45	0.88	0.998870
3983	3R_DroMel_CAF1	10,804,959 – 10,805,089	- - - - - - - - -	6386	10,804,959 – 10,805,079	-	6	120	89.44	-1.63	0.83	0.500000
3983	3R_DroMel_CAF1	10,804,959 – 10,805,089	- - - - - - - - -	6387	10,804,999 – 10,805,089	-	5	90	97.33	-2.48	0.98	0.999848
3984	3R_DroMel_CAF1	10,813,789 – 10,813,882	- - - - - - - - -	6388	10,813,789 – 10,813,882	+	6	99	86.18	-1.80	0.89	0.853998
3985	3R_DroMel_CAF1	10,816,239 – 10,816,402	- - "RNAmicro=f:10816279_t:10816377_strand:+_p:0.983597" - - - - - -	6389	10,816,239 – 10,816,338	+	6	99	94.07	-1.63	0.85	0.646148
				6390	10,816,279 – 10,816,377	+	6	99	89.24	-3.28	0.90	0.998488
				6391	10,816,279 – 10,816,377	-	6	99	89.24	-4.46	0.92	0.999701
				6392	10,816,298 – 10,816,402	-	6	120	76.67	-1.38	0.82	0.919310
3986	3R_DroMel_CAF1	10,818,202 – 10,818,293	- - - - - - - - -	6393	10,818,202 – 10,818,293	+	6	108	79.95	-2.60	0.63	0.941461
3986	3R_DroMel_CAF1	10,818,202 – 10,818,293	- - - - - - - - -	6394	10,818,202 – 10,818,293	-	6	108	79.95	-2.22	0.60	0.861953
3987	3R_DroMel_CAF1	10,818,970 – 10,819,062	- - - - - - - - -	6395	10,818,970 – 10,819,062	-	6	105	85.66	-3.03	0.69	0.583289
3988	3R_DroMel_CAF1	10,828,739 – 10,828,832	- - - - - - - - -	6396	10,828,739 – 10,828,832	+	5	95	91.40	-1.65	0.76	0.613336
3988	3R_DroMel_CAF1	10,828,739 – 10,828,832	- - - - - - - - -	6397	10,828,739 – 10,828,832	-	5	95	91.40	-1.95	0.84	0.969650
3989	3R_DroMel_CAF1	10,832,796 – 10,832,928	- - - - - - - - -	6398	10,832,796 – 10,832,906	-	6	120	78.90	-1.61	0.61	0.679578
				6399	10,832,827 – 10,832,928	+	6	114	76.83	-1.44	0.75	0.903641
				6400	10,832,827 – 10,832,928	-	6	114	76.83	-1.42	0.69	0.845208
3990	3R_DroMel_CAF1	10,841,809 – 10,841,907	- - - - - - - - -	6401	10,841,809 – 10,841,907	+	5	102	92.08	-2.23	0.86	0.996469
3991	3R_DroMel_CAF1	10,842,457 – 10,842,549	- - - - - - - - -	6402	10,842,457 – 10,842,549	+	6	103	80.98	-1.35	0.67	0.539325
3992	3R_DroMel_CAF1	10,843,437 – 10,843,536	- - - - - - - - -	6403	10,843,437 – 10,843,536	+	6	101	89.61	-1.87	0.82	0.576773
3993	3R_DroMel_CAF1	10,856,681 – 10,856,820	- - - - - - - - -	6404	10,856,681 – 10,856,784	-	6	118	82.13	-2.18	0.80	0.878101
3993	3R_DroMel_CAF1	10,856,681 – 10,856,820	- - - - - - - - -	6405	10,856,705 – 10,856,820	-	6	120	81.61	-2.24	0.66	0.812612
3994	3R_DroMel_CAF1	10,857,809 – 10,857,907	- - - - - - - - -	6406	10,857,809 – 10,857,907	-	6	107	67.98	-1.43	0.51	0.606735
3995	3R_DroMel_CAF1	10,863,919 – 10,864,015	- - - - - - - - -	6407	10,863,919 – 10,864,015	-	4	97	75.05	-1.65	0.68	0.791078
3996	3R_DroMel_CAF1	10,872,557 – 10,872,654	- - - - - - - - -	6408	10,872,557 – 10,872,654	-	5	97	80.39	-1.64	0.64	0.544041
3997	3R_DroMel_CAF1	10,880,400 – 10,880,495	- - - - - - - - -	6409	10,880,400 – 10,880,495	+	6	108	81.82	-1.75	0.74	0.741190
3998	3R_DroMel_CAF1	10,885,307 – 10,885,398	- - - - - - - - -	6410	10,885,307 – 10,885,398	-	6	92	73.48	-3.43	0.61	0.998013
3999	3R_DroMel_CAF1	10,888,452 – 10,888,550	- - - - - - - - -	6411	10,888,452 – 10,888,550	+	5	98	85.48	-1.73	0.77	0.718611
4000	3R_DroMel_CAF1	10,896,757 – 10,896,853	- - - - - - - - -	6412	10,896,757 – 10,896,853	+	6	102	79.91	-1.13	0.69	0.500000
4001	3R_DroMel_CAF1	10,900,945 – 10,901,079	- - - - - - - - -	6413	10,900,945 – 10,901,039	+	5	94	90.21	-1.83	0.82	0.923763
				6414	10,900,965 – 10,901,079	+	5	114	90.44	-1.43	0.87	0.775720
				6415	10,900,965 – 10,901,079	-	5	114	90.44	-1.74	0.80	0.846393
4002	3R_DroMel_CAF1	10,903,214 – 10,903,319	- - - - - - - - -	6416	10,903,214 – 10,903,319	+	4	120	74.67	-2.43	0.46	0.825327
4003	3R_DroMel_CAF1	10,910,843 – 10,910,937	- - - - - - - - -	6417	10,910,843 – 10,910,937	+	6	113	79.66	-2.54	0.49	0.829173
4004	3R_DroMel_CAF1	10,912,982 – 10,913,105	- - - - - - - - -	6418	10,912,982 – 10,913,080	+	4	107	78.86	-2.88	0.80	0.999086
				6419	10,912,982 – 10,913,080	-	4	107	78.86	-1.49	0.83	0.722588
				6420	10,913,008 – 10,913,105	-	6	102	80.40	-2.49	0.62	0.910813
4005	3R_DroMel_CAF1	10,915,937 – 10,916,034	- - - - - - - - -	6421	10,915,937 – 10,916,034	+	3	97	76.55	-2.16	0.92	0.999395
4006	3R_DroMel_CAF1	10,917,419 – 10,917,527	- - - - - - - - -	6422	10,917,419 – 10,917,527	+	3	108	95.37	-1.82	0.89	0.560871
4007	3R_DroMel_CAF1	10,917,755 – 10,917,846	- - - - - - - - -	6423	10,917,755 – 10,917,846	-	3	102	88.45	-2.05	0.76	0.558665
4008	3R_DroMel_CAF1	10,920,723 – 10,920,874	- - - - - - - - -	6424	10,920,723 – 10,920,819	+	3	96	91.67	-1.84	0.86	0.560765
4008	3R_DroMel_CAF1	10,920,723 – 10,920,874	- - - - - - - - -	6425	10,920,779 – 10,920,874	+	3	108	81.41	-1.64	0.69	0.571561
4009	3R_DroMel_CAF1	10,923,382 – 10,923,502	- - - "knownCDS=Parent=FBtr0083040;Name=CG31304-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31304-RA" - - - - -	6426	10,923,382 – 10,923,502	-	6	120	81.72	-1.73	0.60	0.500000
4010	3R_DroMel_CAF1	10,927,769 – 10,927,859	- - - - - - - - -	6427	10,927,769 – 10,927,859	-	6	97	76.36	-1.34	0.67	0.772490
4011	3R_DroMel_CAF1	10,935,531 – 10,935,640	- - - - - - - - -	6428	10,935,531 – 10,935,640	+	5	113	73.05	-1.58	0.14	0.680969
4012	3R_DroMel_CAF1	10,935,862 – 10,936,002	- - - - - - - - -	6429	10,935,862 – 10,935,966	-	6	113	81.37	-2.55	0.50	0.636850
4012	3R_DroMel_CAF1	10,935,862 – 10,936,002	- - - - - - - - -	6430	10,935,902 – 10,936,002	-	6	102	81.26	-3.10	0.80	0.956517
4013	3R_DroMel_CAF1	10,938,417 – 10,938,514	- - - - - - - - -	6431	10,938,417 – 10,938,514	-	6	115	69.24	-2.21	0.21	0.581631
4014	3R_DroMel_CAF1	10,938,935 – 10,939,028	- - - - - - - - -	6432	10,938,935 – 10,939,028	-	5	116	85.14	-2.28	0.66	0.797429
4015	3R_DroMel_CAF1	10,945,544 – 10,945,643	- - - - - - - - -	6433	10,945,544 – 10,945,643	-	5	115	68.72	-1.80	0.35	0.621398
4016	3R_DroMel_CAF1	10,949,432 – 10,949,523	- - - - - - - - -	6434	10,949,432 – 10,949,523	-	5	97	88.92	-1.57	0.75	0.562137
4017	3R_DroMel_CAF1	10,952,252 – 10,952,349	- - - - - - - - -	6435	10,952,252 – 10,952,349	-	5	107	86.35	-1.80	0.71	0.634810
4018	3R_DroMel_CAF1	10,955,601 – 10,955,694	- - - - - - - - -	6436	10,955,601 – 10,955,694	-	5	107	70.95	-2.01	0.48	0.943532
4019	3R_DroMel_CAF1	10,972,697 – 10,972,788	- - - - - - - - -	6437	10,972,697 – 10,972,788	-	4	98	87.46	-2.15	0.75	0.878564
4020	3R_DroMel_CAF1	10,975,300 – 10,975,392	- - - - - - - - -	6438	10,975,300 – 10,975,392	+	6	101	82.18	-2.49	0.64	0.789395
4021	3R_DroMel_CAF1	10,980,792 – 10,980,886	- - - - - - - - -	6439	10,980,792 – 10,980,886	+	5	98	74.45	-2.01	0.31	0.907479
4022	3R_DroMel_CAF1	10,981,679 – 10,981,771	- - - - - - - - -	6440	10,981,679 – 10,981,771	-	6	110	76.46	-3.13	0.28	0.915718
4023	3R_DroMel_CAF1	10,982,051 – 10,982,144	- - - - - - - - -	6441	10,982,051 – 10,982,144	-	4	94	82.57	-2.02	0.61	0.702717
4024	3R_DroMel_CAF1	10,995,937 – 10,996,064	- - - - - - - - -	6442	10,995,937 – 10,996,040	-	5	110	89.00	-2.26	0.74	0.884814
				6443	10,995,969 – 10,996,064	+	5	102	86.27	-1.73	0.71	0.589468
				6444	10,995,969 – 10,996,064	-	5	102	86.27	-1.74	0.71	0.599468
4025	3R_DroMel_CAF1	10,997,695 – 10,997,791	- - - - - - - - -	6445	10,997,695 – 10,997,791	+	6	101	84.28	-1.81	0.72	0.506495
4026	3R_DroMel_CAF1	10,998,194 – 10,998,285	- - - - - - - - -	6446	10,998,194 – 10,998,285	+	6	107	66.12	-2.65	0.51	0.995637
4026	3R_DroMel_CAF1	10,998,194 – 10,998,285	- - - - - - - - -	6447	10,998,194 – 10,998,285	-	6	107	66.12	-2.23	0.50	0.986305
4027	3R_DroMel_CAF1	11,001,859 – 11,002,029	- - - "knownCDS=Parent=FBtr0083032;Name=Zeelin1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6803-RC" - - - - -	6448	11,001,859 – 11,001,956	-	6	110	78.49	-1.95	0.78	0.945673
4027	3R_DroMel_CAF1	11,001,859 – 11,002,029		6449	11,001,916 – 11,002,029	-	6	118	81.73	-1.39	0.72	0.587120
4028	3R_DroMel_CAF1	11,004,740 – 11,004,867	- - - "knownCDS=Parent=FBtr0083030, FBtr0083031, FBtr0083033;Name=Zeelin1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6803-RA, FlyBase+Annotation+IDs:CG6803-RB, FlyBase+Annotation+IDs:CG6803-RD" - - - - -	6450	11,004,740 – 11,004,832	+	6	116	80.52	-1.59	0.92	0.850154
				6451	11,004,740 – 11,004,832	-	6	116	80.52	-1.41	0.89	0.760574
				6452	11,004,752 – 11,004,867	+	6	120	92.32	-1.47	0.96	0.976509
4029	3R_DroMel_CAF1	11,013,943 – 11,014,059	- - - "knownCDS=Parent=FBtr0083027, FBtr0083028;Name=Gyc88E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4154-RA, FlyBase+Annotation+IDs:CG4154-RC" - - - - -	6453	11,013,943 – 11,014,059	+	6	120	77.11	-1.70	0.57	0.708923
4030	3R_DroMel_CAF1	11,014,249 – 11,014,343	- - - "knownCDS=Parent=FBtr0083027, FBtr0083028;Name=Gyc88E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4154-RA, FlyBase+Annotation+IDs:CG4154-RC" - - - - -	6454	11,014,249 – 11,014,343	-	6	94	79.50	-1.82	0.73	0.892717
4031	3R_DroMel_CAF1	11,014,399 – 11,014,497	- - - "knownCDS=Parent=FBtr0083027, FBtr0083028;Name=Gyc88E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4154-RA, FlyBase+Annotation+IDs:CG4154-RC" - - - - -	6455	11,014,399 – 11,014,497	+	5	98	90.00	-1.45	0.86	0.766957
4032	3R_DroMel_CAF1	11,015,142 – 11,015,237	- - - "knownCDS=Parent=FBtr0083027;Name=Gyc88E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4154-RA" - - - - -	6456	11,015,142 – 11,015,237	+	6	96	82.31	-1.31	0.76	0.528628
4033	3R_DroMel_CAF1	11,015,478 – 11,015,583	- - - - - - - - -	6457	11,015,478 – 11,015,583	+	6	114	75.73	-2.43	0.42	0.923505
4033	3R_DroMel_CAF1	11,015,478 – 11,015,583	- - - - - - - - -	6458	11,015,478 – 11,015,583	-	6	114	75.73	-2.18	0.45	0.848290
4034	3R_DroMel_CAF1	11,025,003 – 11,025,157	- - - "knownCDS=Parent=FBtr0083045;Name=CG4196-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4196-RC" - - - - -	6459	11,025,003 – 11,025,117	+	6	120	80.16	-2.88	0.84	0.967524
				6460	11,025,003 – 11,025,117	-	6	120	80.16	-2.93	0.73	0.961487
				6461	11,025,037 – 11,025,157	+	6	120	90.50	-3.49	0.88	0.998228
				6462	11,025,037 – 11,025,157	-	6	120	90.50	-2.83	0.82	0.930805
4035	3R_DroMel_CAF1	11,025,652 – 11,025,753	- - - - - - - - -	6463	11,025,652 – 11,025,753	+	6	103	76.89	-1.22	0.73	0.805491
4036	3R_DroMel_CAF1	11,028,064 – 11,028,176	- - - "knownCDS=Parent=FBtr0083045;Name=CG4196-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4196-RC" - - - - -	6464	11,028,064 – 11,028,176	+	6	120	77.28	-1.84	0.51	0.602892
4037	3R_DroMel_CAF1	11,028,570 – 11,028,669	- - - - - - - - -	6465	11,028,570 – 11,028,669	-	5	99	97.98	-1.56	0.93	0.934325
4038	3R_DroMel_CAF1	11,029,226 – 11,029,318	- - - - - - - - -	6466	11,029,226 – 11,029,318	+	6	94	78.78	-1.64	0.59	0.638802
4039	3R_DroMel_CAF1	11,031,371 – 11,031,466	- - - - - - - - -	6467	11,031,371 – 11,031,466	-	6	117	71.90	-2.20	0.36	0.886921
4040	3R_DroMel_CAF1	11,033,164 – 11,033,284	- - - "knownCDS=Parent=FBtr0083140;Name=CG6687-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6687-RA" - - - - -	6468	11,033,164 – 11,033,284	+	5	120	91.42	-1.34	0.85	0.641076
4040	3R_DroMel_CAF1	11,033,164 – 11,033,284		6469	11,033,164 – 11,033,284	-	5	120	91.42	-1.56	0.82	0.797762
4041	3R_DroMel_CAF1	11,033,524 – 11,033,644	- - - "knownCDS=Parent=FBtr0083140;Name=CG6687-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6687-RA" - - - - -	6470	11,033,524 – 11,033,644	+	5	120	89.25	-1.66	0.73	0.538155
4042	3R_DroMel_CAF1	11,034,979 – 11,035,120	- - - - - - - - -	6471	11,034,979 – 11,035,081	+	6	117	77.56	-2.72	0.64	0.985800
				6472	11,034,979 – 11,035,081	-	6	117	77.56	-1.79	0.65	0.900546
				6473	11,035,005 – 11,035,120	-	6	119	74.14	-1.64	0.60	0.873378
4043	3R_DroMel_CAF1	11,035,614 – 11,035,774	- - - "knownCDS=Parent=FBtr0083048;Name=CG4203-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4203-RA" - - - - -	6474	11,035,614 – 11,035,734	+	6	120	81.67	-2.13	0.65	0.773079
4043	3R_DroMel_CAF1	11,035,614 – 11,035,774		6475	11,035,654 – 11,035,774	+	6	120	81.56	-1.42	0.69	0.567696
4044	3R_DroMel_CAF1	11,040,009 – 11,040,129	- - - "knownCDS=Parent=FBtr0083049, FBtr0083050;Name=CG4210-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4210-RA, FlyBase+Annotation+IDs:CG4210-RB" - - - - -	6476	11,040,009 – 11,040,129	+	3	120	92.22	-1.70	0.92	0.683420
4045	3R_DroMel_CAF1	11,040,289 – 11,040,409	- - - "knownCDS=Parent=FBtr0083049, FBtr0083050;Name=CG4210-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4210-RA, FlyBase+Annotation+IDs:CG4210-RB" - - - - -	6477	11,040,289 – 11,040,409	+	3	120	96.67	-1.81	0.97	0.810682
4045	3R_DroMel_CAF1	11,040,289 – 11,040,409		6478	11,040,289 – 11,040,409	-	3	120	96.67	-1.65	0.91	0.515014
4046	3R_DroMel_CAF1	11,040,506 – 11,040,619	- - - - - - - - -	6479	11,040,506 – 11,040,619	-	3	120	95.00	-1.45	0.97	0.577255
4047	3R_DroMel_CAF1	11,040,659 – 11,040,819	- - - "knownCDS=Parent=FBtr0083138;Name=CG6623-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6623-RA" - - - - -	6480	11,040,659 – 11,040,779	+	3	120	95.56	-1.63	0.97	0.691314
4047	3R_DroMel_CAF1	11,040,659 – 11,040,819		6481	11,040,699 – 11,040,819	+	3	120	96.11	-2.40	0.94	0.938209
4048	3R_DroMel_CAF1	11,041,044 – 11,041,164	- - - "knownCDS=Parent=FBtr0083138;Name=CG6623-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6623-RA" - - - - -	6482	11,041,044 – 11,041,164	-	3	120	97.78	-1.86	1.00	0.872505
4049	3R_DroMel_CAF1	11,042,244 – 11,042,364	- - - "knownCDS=Parent=FBtr0083138;Name=CG6623-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6623-RA" - - - - -	6483	11,042,244 – 11,042,364	+	3	120	98.89	-1.91	0.97	0.835995
4049	3R_DroMel_CAF1	11,042,244 – 11,042,364		6484	11,042,244 – 11,042,364	-	3	120	98.89	-1.67	0.97	0.689397
4050	3R_DroMel_CAF1	11,042,924 – 11,043,284	- - - "knownCDS=Parent=FBtr0083138;Name=CG6623-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6623-RA" - - - - -	6485	11,042,924 – 11,043,044	+	3	120	96.11	-1.59	0.93	0.525268
				6486	11,043,004 – 11,043,124	+	3	120	95.83	-2.70	0.94	0.964502
				6487	11,043,004 – 11,043,124	-	3	120	95.83	-1.70	0.94	0.649391
				6488	11,043,084 – 11,043,204	-	3	120	98.33	-1.78	1.00	0.839687
				6489	11,043,164 – 11,043,284	-	3	120	99.44	-1.74	1.00	0.813081
4051	3R_DroMel_CAF1	11,044,244 – 11,044,364	- - - "knownCDS=Parent=FBtr0083138;Name=CG6623-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6623-RA" - - - - -	6490	11,044,244 – 11,044,364	-	3	120	98.89	-1.36	0.98	0.500000
4052	3R_DroMel_CAF1	11,045,293 – 11,045,453	- - - "knownCDS=Parent=FBtr0083051;Name=CG12241-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12241-RA" - - - - -	6491	11,045,293 – 11,045,413	+	3	120	97.78	-1.92	0.97	0.849048
				6492	11,045,333 – 11,045,453	+	3	120	98.33	-2.20	1.00	0.950278
				6493	11,045,333 – 11,045,453	-	3	120	98.33	-1.31	1.00	0.500000
4053	3R_DroMel_CAF1	11,045,493 – 11,045,733	- - - "knownCDS=Parent=FBtr0083051;Name=CG12241-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12241-RA" - - - - -	6494	11,045,493 – 11,045,613	-	3	120	98.33	-2.15	1.00	0.940293
4053	3R_DroMel_CAF1	11,045,493 – 11,045,733		6495	11,045,613 – 11,045,733	-	3	120	97.22	-1.69	0.90	0.500000
4054	3R_DroMel_CAF1	11,046,292 – 11,046,412	- - - "knownCDS=Parent=FBtr0083051;Name=CG12241-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12241-RA" - - - - -	6496	11,046,292 – 11,046,412	-	3	120	100.00	-1.51	1.00	0.669313
4055	3R_DroMel_CAF1	11,046,812 – 11,046,972	- - - "knownCDS=Parent=FBtr0083051;Name=CG12241-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12241-RA" - - - - -	6497	11,046,812 – 11,046,932	+	3	120	97.78	-1.71	0.95	0.685979
4055	3R_DroMel_CAF1	11,046,812 – 11,046,972		6498	11,046,852 – 11,046,972	+	3	120	97.22	-2.16	0.95	0.897909
4056	3R_DroMel_CAF1	11,047,092 – 11,047,212	- - - "knownCDS=Parent=FBtr0083051;Name=CG12241-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12241-RA" - - - - -	6499	11,047,092 – 11,047,212	-	3	120	98.89	-2.34	0.99	0.956940
4057	3R_DroMel_CAF1	11,047,332 – 11,047,612	- - - "knownCDS=Parent=FBtr0083051;Name=CG12241-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12241-RA" - - - - -	6500	11,047,332 – 11,047,452	-	3	120	98.89	-2.34	0.95	0.916062
				6501	11,047,412 – 11,047,532	-	3	120	98.33	-1.89	0.96	0.795824
				6502	11,047,452 – 11,047,572	+	3	120	98.33	-1.62	0.95	0.588160
				6503	11,047,452 – 11,047,572	-	3	120	98.33	-2.48	0.98	0.965467
				6504	11,047,492 – 11,047,612	+	3	120	96.94	-3.09	0.88	0.936449
				6505	11,047,492 – 11,047,612	-	3	120	96.94	-2.20	0.94	0.895383
4058	3R_DroMel_CAF1	11,049,157 – 11,049,262	- - - "knownCDS=Parent=FBtr0083136;Name=CG31344-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31344-RA" - - - - -	6506	11,049,157 – 11,049,262	+	6	109	83.39	-2.35	0.64	0.598782
4059	3R_DroMel_CAF1	11,060,458 – 11,060,563	- - - - - - - - -	6507	11,060,458 – 11,060,563	+	6	114	79.32	-1.76	0.61	0.725616
4060	3R_DroMel_CAF1	11,063,855 – 11,063,950	- - - - - - - - -	6508	11,063,855 – 11,063,950	+	6	97	79.02	-1.46	0.63	0.613491
4061	3R_DroMel_CAF1	11,064,131 – 11,064,237	- - - "knownCDS=Parent=FBtr0083133;Name=tefu-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6535-RA" - - - - -	6509	11,064,131 – 11,064,237	+	6	117	81.58	-1.26	0.70	0.500000
4062	3R_DroMel_CAF1	11,068,857 – 11,068,949	- - - - - - - - -	6510	11,068,857 – 11,068,949	-	5	104	75.34	-1.79	0.48	0.607558
4063	3R_DroMel_CAF1	11,069,020 – 11,069,136	- - - - - - - - -	6511	11,069,020 – 11,069,136	+	5	119	75.07	-1.79	0.48	0.632538
4063	3R_DroMel_CAF1	11,069,020 – 11,069,136	- - - - - - - - -	6512	11,069,020 – 11,069,136	-	5	119	75.07	-2.42	0.50	0.990537
4064	3R_DroMel_CAF1	11,069,404 – 11,069,496	- - - - - - - - -	6513	11,069,404 – 11,069,496	+	4	104	80.78	-1.82	0.69	0.768575
4065	3R_DroMel_CAF1	11,070,078 – 11,070,195	- - - "knownCDS=Parent=FBtr0083055, FBtr0083057, FBtr0083058, FBtr0083059, FBtr0083060;Name=Hsc70-4-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4264-RE, FlyBase+Annotation+IDs:CG4264-RA, FlyBase+Annotation+IDs:CG4264-RC, FlyBase+Annotation+IDs:CG4264-RD, FlyBase+Annotation+IDs:CG4264-RB" - - - "ncRNAdb=MmuscAK078618_unclassifiable\|5e-28" -	6514	11,070,078 – 11,070,195	+	6	120	91.71	-1.40	0.88	0.690844
4066	3R_DroMel_CAF1	11,070,355 – 11,070,515	- - - "knownCDS=Parent=FBtr0083056;Name=Hsc70-4-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4264-RF" - - - "ncRNAdb=MmuscAK078618_unclassifiable\|4e-14" -	6515	11,070,355 – 11,070,475	-	6	120	90.89	-2.29	0.81	0.714735
4066	3R_DroMel_CAF1	11,070,355 – 11,070,515		6516	11,070,395 – 11,070,515	+	6	120	91.11	-1.10	0.94	0.697828
4067	3R_DroMel_CAF1	11,072,949 – 11,073,065	- - - "knownCDS=Parent=FBtr0083132;Name=CG6499-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6499-RA" - - - - -	6517	11,072,949 – 11,073,065	+	6	119	77.45	-2.23	0.53	0.911542
4068	3R_DroMel_CAF1	11,077,161 – 11,077,257	- - - - - - - - -	6518	11,077,161 – 11,077,257	-	5	96	86.05	-1.90	0.65	0.516570
4069	3R_DroMel_CAF1	11,080,449 – 11,080,542	- - - "knownCDS=Parent=FBtr0083061;Name=CG4285-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4285-RA" - - - - -	6519	11,080,449 – 11,080,542	+	6	99	80.73	-1.76	0.63	0.679429
4069	3R_DroMel_CAF1	11,080,449 – 11,080,542		6520	11,080,449 – 11,080,542	-	6	99	80.73	-3.95	0.84	0.969355
4070	3R_DroMel_CAF1	11,086,576 – 11,086,678	- - - "knownCDS=Parent=FBtr0083129;Name=Su(var)3-9-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6476-RA" - - - - -	6521	11,086,576 – 11,086,678	+	6	108	81.15	-1.45	0.66	0.555807
4071	3R_DroMel_CAF1	11,091,605 – 11,091,714	- - - - - - - - -	6522	11,091,605 – 11,091,714	-	6	109	83.30	-1.46	0.76	0.518209
4072	3R_DroMel_CAF1	11,102,350 – 11,102,470	- - - "knownCDS=Parent=FBtr0083125;Name=MRG15-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6363-RA" - - - - -	6523	11,102,350 – 11,102,470	-	6	120	77.72	-1.58	0.56	0.511751
4073	3R_DroMel_CAF1	11,103,198 – 11,103,303	- - - "knownCDS=Parent=FBtr0083125;Name=MRG15-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6363-RA" - - - - -	6524	11,103,198 – 11,103,303	+	6	111	83.24	-2.65	0.67	0.745679
4074	3R_DroMel_CAF1	11,108,404 – 11,108,496	- - - - - - - - -	6525	11,108,404 – 11,108,496	+	4	93	79.96	-1.62	0.65	0.520385
4075	3R_DroMel_CAF1	11,109,250 – 11,109,341	- - - - - - - - -	6526	11,109,250 – 11,109,341	+	5	98	69.14	-1.97	0.27	0.807763
4076	3R_DroMel_CAF1	11,110,914 – 11,111,063	- - - "knownCDS=Parent=FBtr0089957, FBtr0089968;Name=Tm1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4898-RK, FlyBase+Annotation+IDs:CG4898-RL" - - - - -	6527	11,110,914 – 11,111,023	-	6	114	78.33	-1.23	0.73	0.728788
4076	3R_DroMel_CAF1	11,110,914 – 11,111,063		6528	11,110,946 – 11,111,063	-	6	120	90.73	-1.89	0.93	0.988538
4077	3R_DroMel_CAF1	11,115,881 – 11,116,004	- - - - - - - - -	6529	11,115,881 – 11,115,973	+	6	105	79.90	-1.82	0.55	0.533256
				6530	11,115,906 – 11,116,004	+	6	98	81.11	-1.98	0.61	0.686028
				6531	11,115,906 – 11,116,004	-	6	98	81.11	-1.48	0.64	0.534494
4078	3R_DroMel_CAF1	11,119,166 – 11,119,261	- - - - - - - - -	6532	11,119,166 – 11,119,261	+	6	97	82.73	-3.48	0.48	0.777515
4079	3R_DroMel_CAF1	11,119,925 – 11,120,095	- - - - - - - - -	6533	11,119,925 – 11,120,039	+	6	120	78.63	-2.32	0.55	0.909557
				6534	11,119,925 – 11,120,039	-	6	120	78.63	-2.61	0.61	0.968824
				6535	11,119,999 – 11,120,095	+	5	96	96.46	-1.48	0.89	0.853126
				6536	11,119,999 – 11,120,095	-	5	96	96.46	-2.05	0.82	0.909942
4080	3R_DroMel_CAF1	11,120,315 – 11,120,414	- - - - - - - - -	6537	11,120,315 – 11,120,414	-	5	105	91.86	-1.47	0.85	0.820315
4081	3R_DroMel_CAF1	11,122,271 – 11,122,448	- - - "knownCDS=Parent=FBtr0089957;Name=Tm1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4898-RK" - - - - -	6538	11,122,271 – 11,122,368	-	6	111	78.47	-1.28	0.70	0.713668
				6539	11,122,297 – 11,122,408	+	6	119	88.66	-1.45	0.92	0.829917
				6540	11,122,297 – 11,122,408	-	6	119	88.66	-2.47	0.93	0.996389
				6541	11,122,328 – 11,122,448	-	6	120	97.50	-0.75	0.96	0.564847
4082	3R_DroMel_CAF1	11,131,033 – 11,131,129	- - - "knownCDS=Parent=FBtr0089959;Name=Tm1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4898-RF" - - - - -	6542	11,131,033 – 11,131,129	-	6	99	76.98	-1.21	0.65	0.562598
4083	3R_DroMel_CAF1	11,140,070 – 11,140,174	- - - - - - - - -	6543	11,140,070 – 11,140,174	-	3	120	80.81	-1.54	0.78	0.670958
4084	3R_DroMel_CAF1	11,142,067 – 11,142,177	- - - - - - - - -	6544	11,142,067 – 11,142,177	+	5	110	76.54	-2.34	0.67	0.990859
4085	3R_DroMel_CAF1	11,144,422 – 11,144,524	- - - "knownCDS=Parent=FBtr0083123;Name=CG6276-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6276-RA" - - - - -	6545	11,144,422 – 11,144,524	+	6	109	82.17	-1.96	0.60	0.543136
4086	3R_DroMel_CAF1	11,148,933 – 11,149,033	- - - "knownCDS=Parent=FBtr0083082;Name=ear-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4913-RA" - - - - -	6546	11,148,933 – 11,149,033	+	4	100	95.17	-1.44	0.93	0.560749
4087	3R_DroMel_CAF1	11,154,006 – 11,154,110	- - - - - - - - -	6547	11,154,006 – 11,154,110	+	5	104	71.88	-1.46	0.60	0.573071
4087	3R_DroMel_CAF1	11,154,006 – 11,154,110	- - - - - - - - -	6548	11,154,006 – 11,154,110	-	5	104	71.88	-1.65	0.50	0.572147
4088	3R_DroMel_CAF1	11,154,326 – 11,154,431	- - - - - - - - -	6549	11,154,326 – 11,154,431	+	5	105	77.97	-1.68	0.66	0.728838
4089	3R_DroMel_CAF1	11,155,135 – 11,155,255	- - - "knownCDS=Parent=FBtr0083083;Name=ea-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4920-RA" - - - - -	6550	11,155,135 – 11,155,255	-	3	120	94.44	-1.66	0.93	0.614169
4090	3R_DroMel_CAF1	11,162,090 – 11,162,210	- - - "knownCDS=Parent=FBtr0083085;Name=Sra-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4931-RA" - - - - -	6551	11,162,090 – 11,162,210	-	6	120	81.28	-2.01	0.62	0.719649
4091	3R_DroMel_CAF1	11,166,310 – 11,166,424	- - - - - - - - -	6552	11,166,310 – 11,166,424	+	5	120	82.90	-2.68	0.49	0.789843
4092	3R_DroMel_CAF1	11,166,638 – 11,166,735	- - - "knownCDS=Parent=FBtr0083086;Name=Aats-ser-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4938-RA" - - - - -	6553	11,166,638 – 11,166,735	+	6	103	73.95	-1.27	0.63	0.661943
4093	3R_DroMel_CAF1	11,168,788 – 11,168,908	- - - - - - - - -	6554	11,168,788 – 11,168,908	+	4	120	88.19	-1.52	0.70	0.528185
4093	3R_DroMel_CAF1	11,168,788 – 11,168,908	- - - - - - - - -	6555	11,168,788 – 11,168,908	-	4	120	88.19	-2.01	0.71	0.764388
4094	3R_DroMel_CAF1	11,176,959 – 11,177,055	- - - - - - - - -	6556	11,176,959 – 11,177,055	+	6	101	80.14	-1.60	0.62	0.600960
4095	3R_DroMel_CAF1	11,187,216 – 11,187,328	- - - "knownCDS=Parent=FBtr0083114;Name=ldlCp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6177-RA" - - - - -	6557	11,187,216 – 11,187,328	-	6	119	77.10	-1.49	0.65	0.788376
4096	3R_DroMel_CAF1	11,189,820 – 11,190,002	- - - - - - - - -	6558	11,189,820 – 11,189,911	-	3	112	66.35	-0.91	0.83	0.977987
4096	3R_DroMel_CAF1	11,189,820 – 11,190,002	- - - - - - - - -	6559	11,189,911 – 11,190,002	+	3	120	64.35	-0.98	0.75	0.949918
4097	3R_DroMel_CAF1	11,193,886 – 11,193,995	- - - "knownCDS=Parent=FBtr0083109;Name=CG14868-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14868-RA" - - - - -	6560	11,193,886 – 11,193,995	-	6	120	75.62	-1.57	0.54	0.523030
4098	3R_DroMel_CAF1	11,196,153 – 11,196,256	- - - - - - - - -	6561	11,196,153 – 11,196,256	+	6	120	67.91	-2.31	0.61	0.992039
4098	3R_DroMel_CAF1	11,196,153 – 11,196,256	- - - - - - - - -	6562	11,196,153 – 11,196,256	-	6	120	67.91	-1.67	0.68	0.970937
4099	3R_DroMel_CAF1	11,198,673 – 11,198,774	- - - - - - - - -	6563	11,198,673 – 11,198,774	+	6	107	77.48	-1.47	0.67	0.814251
4099	3R_DroMel_CAF1	11,198,673 – 11,198,774	- - - - - - - - -	6564	11,198,673 – 11,198,774	-	6	107	77.48	-1.21	0.66	0.594339
4100	3R_DroMel_CAF1	11,200,249 – 11,200,353	- - - - - - - - -	6565	11,200,249 – 11,200,353	+	5	104	95.96	-1.12	0.98	0.719737
4100	3R_DroMel_CAF1	11,200,249 – 11,200,353	- - - - - - - - -	6566	11,200,249 – 11,200,353	-	5	104	95.96	-1.57	0.90	0.938852
4101	3R_DroMel_CAF1	11,200,387 – 11,200,484	- - - - - - - - -	6567	11,200,387 – 11,200,484	+	6	120	80.58	-2.68	0.83	0.958682
4101	3R_DroMel_CAF1	11,200,387 – 11,200,484	- - - - - - - - -	6568	11,200,387 – 11,200,484	-	6	120	80.58	-1.85	0.77	0.869915
4102	3R_DroMel_CAF1	11,204,612 – 11,204,705	- - - - - - - - -	6569	11,204,612 – 11,204,705	+	6	95	89.04	-1.48	0.92	0.848363
4103	3R_DroMel_CAF1	11,204,785 – 11,204,877	- - - - - - - - -	6570	11,204,785 – 11,204,877	-	5	92	87.07	-1.87	0.83	0.907091
4104	3R_DroMel_CAF1	11,205,622 – 11,205,712	- - - - - - - - -	6571	11,205,622 – 11,205,712	-	5	108	74.67	-2.07	0.59	0.962169
4105	3R_DroMel_CAF1	11,205,750 – 11,205,881	- - - - - - - - -	6572	11,205,750 – 11,205,841	+	6	93	85.53	-2.25	0.81	0.784480
4105	3R_DroMel_CAF1	11,205,750 – 11,205,881	- - - - - - - - -	6573	11,205,776 – 11,205,881	+	5	105	95.71	-2.14	0.89	0.996829
4106	3R_DroMel_CAF1	11,206,887 – 11,206,995	- - - "knownCDS=Parent=FBtr0083095;Name=CG14867-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14867-RA" - - - - -	6574	11,206,887 – 11,206,995	+	6	120	85.12	-2.58	0.82	0.903348
4107	3R_DroMel_CAF1	11,209,382 – 11,209,518	- - - - - - - - -	6575	11,209,382 – 11,209,501	+	6	120	90.72	-2.27	0.87	0.958607
4107	3R_DroMel_CAF1	11,209,382 – 11,209,518	- - - - - - - - -	6576	11,209,422 – 11,209,518	+	6	105	83.52	-1.48	0.80	0.554855
4108	3R_DroMel_CAF1	11,212,408 – 11,212,528	- - - "knownCDS=Parent=FBtr0083096, FBtr0083097, FBtr0083098;Name=CG31302-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31302-RA, FlyBase+Annotation+IDs:CG31302-RB, FlyBase+Annotation+IDs:CG31302-RC" - - - - -	6577	11,212,408 – 11,212,528	+	6	120	87.04	-1.68	0.85	0.650155
4108	3R_DroMel_CAF1	11,212,408 – 11,212,528		6578	11,212,408 – 11,212,528	-	6	120	87.04	-1.90	0.80	0.546888
4109	3R_DroMel_CAF1	11,212,939 – 11,213,059	- - - "knownCDS=Parent=FBtr0083096, FBtr0083097, FBtr0083098;Name=CG31302-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31302-RA, FlyBase+Annotation+IDs:CG31302-RB, FlyBase+Annotation+IDs:CG31302-RC" - - - - -	6579	11,212,939 – 11,213,059	+	6	120	89.44	-1.97	0.83	0.661776
4110	3R_DroMel_CAF1	11,213,171 – 11,213,315	- - - - - - - - -	6580	11,213,171 – 11,213,275	+	3	118	78.21	-2.15	0.75	0.983126
				6581	11,213,171 – 11,213,275	-	3	118	78.21	-1.73	0.68	0.817927
				6582	11,213,200 – 11,213,315	+	3	120	82.18	-3.43	0.92	0.997489
				6583	11,213,200 – 11,213,315	-	3	120	82.18	-2.50	0.84	0.978271
4111	3R_DroMel_CAF1	11,214,061 – 11,214,221	- - - "knownCDS=Parent=FBtr0083096, FBtr0083097, FBtr0083098;Name=CG31302-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31302-RA, FlyBase+Annotation+IDs:CG31302-RB, FlyBase+Annotation+IDs:CG31302-RC" - - - - -	6584	11,214,061 – 11,214,181	+	6	120	88.50	-3.08	0.88	0.993846
				6585	11,214,061 – 11,214,181	-	6	120	88.50	-2.54	0.81	0.830620
				6586	11,214,101 – 11,214,221	+	6	120	88.61	-2.73	0.77	0.656393
				6587	11,214,101 – 11,214,221	-	6	120	88.61	-2.81	0.76	0.583259
4112	3R_DroMel_CAF1	11,221,272 – 11,221,416	- - - - - - - - -	6588	11,221,272 – 11,221,383	-	6	118	83.77	-2.27	0.70	0.658402
				6589	11,221,311 – 11,221,416	+	6	119	83.89	-2.89	0.62	0.643429
				6590	11,221,311 – 11,221,416	-	6	119	83.89	-2.09	0.70	0.591170
4113	3R_DroMel_CAF1	11,225,141 – 11,225,329	- - "RNAmicro=f:11225141_t:11225260_strand:+_p:0.639507" "knownCDS=Parent=FBtr0083096, FBtr0083097, FBtr0083098;Name=CG31302-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31302-RA, FlyBase+Annotation+IDs:CG31302-RB, FlyBase+Annotation+IDs:CG31302-RC" - - - - -	6591	11,225,141 – 11,225,261	+	6	120	93.94	-1.54	0.85	0.571000
				6592	11,225,141 – 11,225,261	-	6	120	93.94	-1.30	0.93	0.907386
				6593	11,225,221 – 11,225,329	+	6	120	77.50	-1.89	0.50	0.593553
4114	3R_DroMel_CAF1	11,227,774 – 11,227,886	- - - - - - - - -	6594	11,227,774 – 11,227,886	-	3	120	91.76	-2.59	0.80	0.781626
4115	3R_DroMel_CAF1	11,228,838 – 11,228,958	- - - "knownCDS=Parent=FBtr0083105, FBtr0083106;Name=CG6125-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6125-RB, FlyBase+Annotation+IDs:CG6125-RA" - - - - -	6595	11,228,838 – 11,228,958	+	6	120	77.50	-2.17	0.46	0.739971
4116	3R_DroMel_CAF1	11,229,112 – 11,229,206	- - - - - - - - -	6596	11,229,112 – 11,229,206	+	6	100	73.89	-1.97	0.55	0.939171
4117	3R_DroMel_CAF1	11,229,284 – 11,229,382	- - - - - - - - -	6597	11,229,284 – 11,229,382	+	6	98	79.56	-1.61	0.73	0.839121
4118	3R_DroMel_CAF1	11,229,688 – 11,229,796	- - - - - - - - -	6598	11,229,688 – 11,229,796	+	6	112	82.68	-1.99	0.66	0.635483
4118	3R_DroMel_CAF1	11,229,688 – 11,229,796	- - - - - - - - -	6599	11,229,688 – 11,229,796	-	6	112	82.68	-2.29	0.68	0.747517
4119	3R_DroMel_CAF1	11,235,625 – 11,235,737	- - - - - - - - -	6600	11,235,625 – 11,235,720	+	6	117	68.68	-1.19	0.67	0.840979
4119	3R_DroMel_CAF1	11,235,625 – 11,235,737	- - - - - - - - -	6601	11,235,643 – 11,235,737	+	6	108	79.41	-2.21	0.70	0.939388
4120	3R_DroMel_CAF1	11,238,904 – 11,239,001	- - - "knownCDS=Parent=FBtr0083099;Name=Atx2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5166-RB" - - - - -	6602	11,238,904 – 11,239,001	+	6	105	80.29	-1.54	0.69	0.720915
4121	3R_DroMel_CAF1	11,240,782 – 11,240,902	- - - - - - - - -	6603	11,240,782 – 11,240,902	-	3	120	93.89	-1.79	0.94	0.755715
4122	3R_DroMel_CAF1	11,243,104 – 11,243,212	"known=stem_loop ID=Dmel\CG_RFAM_MIR_48002333;Name=dme-mir-13b-1" - "RNAmicro=f:11243104_t:11243223_strand:+_p:0.999183" - "Rfam=AC007769.3/76625-76559_RF00047;mir-2;\|8e-32" - "miRBase=dme-mir-13b-1\|7e-34" - "Flybase=FBgn0046828:mir-13b-2:microRNA_encoding_gene\|7e-07"	6604	11,243,104 – 11,243,212	+	6	120	83.19	-2.40	0.76	0.829763
4122	3R_DroMel_CAF1	11,243,104 – 11,243,212		6605	11,243,104 – 11,243,212	-	6	120	83.19	-3.41	0.93	0.993010
4123	3R_DroMel_CAF1	11,243,239 – 11,243,348	"known=stem_loop ID=Dmel\CG_RFAM_MIR_48002335;Name=dme-mir-13a" - "RNAmicro=f:11243256_t:11243375_strand:+_p:0.999996" - "Rfam=AE003708.3/221101-221033_RF00047;mir-2;\|5e-33" - "miRBase=dme-mir-13a\|4e-38" - "Flybase=FBgn0046830:mir-13a:microRNA_encoding_gene\|7e-07"	6606	11,243,239 – 11,243,331	-	6	104	75.89	-2.06	0.85	0.978769
				6607	11,243,256 – 11,243,348	+	6	120	77.10	-2.73	0.76	0.984863
				6608	11,243,256 – 11,243,348	-	6	120	77.10	-4.25	0.93	0.941281
4124	3R_DroMel_CAF1	11,243,453 – 11,243,562	"known=stem_loop ID=Dmel\CG_RFAM_MIR_48002337;Name=dme-mir-2c" - - - - - "miRBase=dme-mir-2c\|3e-51" - "Flybase=FBgn0067339:mir-2c:microRNA_encoding_gene\|2e-07"	6609	11,243,453 – 11,243,562	+	6	119	83.07	-2.27	0.76	0.807796
4124	3R_DroMel_CAF1	11,243,453 – 11,243,562		6610	11,243,453 – 11,243,562	-	6	119	83.07	-2.36	0.76	0.827927
4125	3R_DroMel_CAF1	11,244,094 – 11,244,184	- - - - - - - "ncRNAdb=MmuscAK086830_unclassifiable\|7e-08" -	6611	11,244,094 – 11,244,184	+	4	100	80.58	-2.90	0.68	0.996174
4125	3R_DroMel_CAF1	11,244,094 – 11,244,184		6612	11,244,094 – 11,244,184	-	4	100	80.58	-3.85	0.59	0.998012
4126	3R_DroMel_CAF1	11,251,609 – 11,251,714	- - - - - - - - -	6613	11,251,609 – 11,251,714	-	5	111	87.90	-1.76	0.75	0.690425
4127	3R_DroMel_CAF1	11,255,444 – 11,255,537	- - - - - - - - -	6614	11,255,444 – 11,255,537	+	6	118	79.55	-3.29	0.46	0.961880
4128	3R_DroMel_CAF1	11,255,723 – 11,255,827	- - - - - - - - -	6615	11,255,723 – 11,255,827	+	5	115	83.70	-1.96	0.64	0.659448
4129	3R_DroMel_CAF1	11,261,281 – 11,261,419	- - - - - - - - -	6616	11,261,281 – 11,261,393	+	6	117	78.02	-2.22	0.41	0.519656
4129	3R_DroMel_CAF1	11,261,281 – 11,261,419	- - - - - - - - -	6617	11,261,318 – 11,261,419	+	4	101	86.49	-2.60	0.74	0.954049
4130	3R_DroMel_CAF1	11,267,032 – 11,267,152	- - - "knownCDS=Parent=FBtr0083143;Name=Act88F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5178-RA" - - - - -	6618	11,267,032 – 11,267,152	-	6	120	90.11	-1.99	0.81	0.520506
4131	3R_DroMel_CAF1	11,269,634 – 11,269,750	- - - "knownCDS=Parent=FBtr0083160;Name=CG14869-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14869-RB" - - - - -	6619	11,269,634 – 11,269,750	+	6	116	79.77	-1.72	0.65	0.772613
4132	3R_DroMel_CAF1	11,273,186 – 11,273,297	- - - "knownCDS=Parent=FBtr0083160;Name=CG14869-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14869-RB" - - - - -	6620	11,273,186 – 11,273,297	-	6	111	74.29	-2.31	0.31	0.700126
4133	3R_DroMel_CAF1	11,274,577 – 11,274,667	- - - - - - - - -	6621	11,274,577 – 11,274,667	+	6	100	76.53	-0.96	0.86	0.784868
4134	3R_DroMel_CAF1	11,274,710 – 11,274,807	- - - "knownCDS=Parent=FBtr0083160;Name=CG14869-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14869-RB" - - - - -	6622	11,274,710 – 11,274,807	+	6	97	80.95	-1.41	0.65	0.522506
4134	3R_DroMel_CAF1	11,274,710 – 11,274,807		6623	11,274,710 – 11,274,807	-	6	97	80.95	-2.55	0.70	0.920405
4135	3R_DroMel_CAF1	11,277,549 – 11,277,641	- - - - - - - - -	6624	11,277,549 – 11,277,641	+	6	116	68.76	-3.80	0.38	0.999270
4136	3R_DroMel_CAF1	11,281,938 – 11,282,035	- - - - - - - - -	6625	11,281,938 – 11,282,035	+	6	107	80.94	-2.14	0.52	0.529572
4136	3R_DroMel_CAF1	11,281,938 – 11,282,035	- - - - - - - - -	6626	11,281,938 – 11,282,035	-	6	107	80.94	-1.13	0.75	0.520960
4137	3R_DroMel_CAF1	11,286,887 – 11,286,983	- - - - - - - - -	6627	11,286,887 – 11,286,983	+	4	96	98.44	-2.22	0.95	0.861160
4137	3R_DroMel_CAF1	11,286,887 – 11,286,983	- - - - - - - - -	6628	11,286,887 – 11,286,983	-	4	96	98.44	-2.23	1.00	0.912681
4138	3R_DroMel_CAF1	11,288,727 – 11,288,823	- - - - - - - - -	6629	11,288,727 – 11,288,823	-	6	101	71.96	-2.45	0.39	0.978058
4139	3R_DroMel_CAF1	11,288,877 – 11,288,987	- - - - - - - - -	6630	11,288,877 – 11,288,987	+	6	115	73.47	-1.59	0.51	0.539361
4139	3R_DroMel_CAF1	11,288,877 – 11,288,987	- - - - - - - - -	6631	11,288,877 – 11,288,987	-	6	115	73.47	-2.28	0.62	0.990317
4140	3R_DroMel_CAF1	11,293,382 – 11,293,477	- - - - - - - - -	6632	11,293,382 – 11,293,477	+	5	110	85.12	-1.76	0.69	0.601263
4140	3R_DroMel_CAF1	11,293,382 – 11,293,477	- - - - - - - - -	6633	11,293,382 – 11,293,477	-	5	110	85.12	-1.54	0.76	0.533167
4141	3R_DroMel_CAF1	11,295,183 – 11,295,278	- - - - - - - - -	6634	11,295,183 – 11,295,278	-	5	95	94.52	-2.08	0.87	0.992724
4142	3R_DroMel_CAF1	11,302,220 – 11,302,319	- - - - - - - - -	6635	11,302,220 – 11,302,319	+	4	119	79.66	-2.35	0.64	0.962497
4142	3R_DroMel_CAF1	11,302,220 – 11,302,319	- - - - - - - - -	6636	11,302,220 – 11,302,319	-	4	119	79.66	-1.94	0.70	0.881640
4143	3R_DroMel_CAF1	11,304,611 – 11,304,716	- - - - - - - - -	6637	11,304,611 – 11,304,716	+	6	115	77.30	-2.19	0.59	0.945205
4143	3R_DroMel_CAF1	11,304,611 – 11,304,716	- - - - - - - - -	6638	11,304,611 – 11,304,716	-	6	115	77.30	-2.76	0.67	0.987805
4144	3R_DroMel_CAF1	11,305,056 – 11,305,153	- - - - - - - - -	6639	11,305,056 – 11,305,153	+	3	97	97.92	-2.41	0.94	0.923502
4145	3R_DroMel_CAF1	11,308,724 – 11,308,822	- - - - - - - - -	6640	11,308,724 – 11,308,822	+	6	117	76.25	-2.06	0.50	0.848895
4145	3R_DroMel_CAF1	11,308,724 – 11,308,822	- - - - - - - - -	6641	11,308,724 – 11,308,822	-	6	117	76.25	-2.12	0.46	0.792372
4146	3R_DroMel_CAF1	11,312,150 – 11,312,270	- - - "knownCDS=Parent=FBtr0083147;Name=CG5205-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5205-RA" - - - - -	6642	11,312,150 – 11,312,270	-	6	120	81.39	-1.75	0.66	0.681840
4147	3R_DroMel_CAF1	11,313,646 – 11,313,744	- - - "knownCDS=Parent=FBtr0083147;Name=CG5205-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5205-RA" - - - - -	6643	11,313,646 – 11,313,744	+	6	110	78.29	-1.97	0.54	0.746074
4147	3R_DroMel_CAF1	11,313,646 – 11,313,744		6644	11,313,646 – 11,313,744	-	6	110	78.29	-2.38	0.67	0.968235
4148	3R_DroMel_CAF1	11,319,608 – 11,319,715	- - - - - - - - -	6645	11,319,608 – 11,319,715	+	5	120	93.32	-1.57	0.86	0.905357
4149	3R_DroMel_CAF1	11,320,025 – 11,320,145	- - - - - - - - -	6646	11,320,025 – 11,320,145	+	5	120	94.67	-1.45	0.88	0.881696
4150	3R_DroMel_CAF1	11,320,955 – 11,321,075	- - - "knownCDS=Parent=FBtr0083148;Name=CG5213-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5213-RA" - - - - -	6647	11,320,955 – 11,321,075	+	5	120	83.50	-1.81	0.71	0.699331
4150	3R_DroMel_CAF1	11,320,955 – 11,321,075		6648	11,320,955 – 11,321,075	-	5	120	83.50	-1.78	0.72	0.691642
4151	3R_DroMel_CAF1	11,321,463 – 11,321,607	- - - - - - - - -	6649	11,321,463 – 11,321,573	-	5	120	89.30	-3.45	0.81	0.998867
				6650	11,321,503 – 11,321,607	+	5	120	90.67	-1.73	0.77	0.709497
				6651	11,321,503 – 11,321,607	-	5	120	90.67	-2.54	0.92	0.999792
4152	3R_DroMel_CAF1	11,321,720 – 11,321,949	- - - - - - - - -	6652	11,321,720 – 11,321,840	+	5	120	96.33	-2.45	0.82	0.975267
				6653	11,321,760 – 11,321,880	+	5	120	97.33	-2.45	0.89	0.997994
				6654	11,321,760 – 11,321,880	-	5	120	97.33	-1.54	0.95	0.960080
				6655	11,321,800 – 11,321,912	-	5	118	93.71	-1.94	0.86	0.986627
				6656	11,321,840 – 11,321,949	-	5	118	88.11	-1.66	0.81	0.772378
4153	3R_DroMel_CAF1	11,322,484 – 11,322,595	- - - - - - - - -	6657	11,322,484 – 11,322,595	-	5	120	85.25	-1.89	0.71	0.707629
4154	3R_DroMel_CAF1	11,322,900 – 11,323,035	- - - - - - - - -	6658	11,322,900 – 11,323,020	+	5	120	96.00	-1.38	0.84	0.548612
4154	3R_DroMel_CAF1	11,322,900 – 11,323,035	- - - - - - - - -	6659	11,322,940 – 11,323,035	+	5	120	84.39	-1.57	0.81	0.602179
4155	3R_DroMel_CAF1	11,323,145 – 11,323,258	- - - - - - - - -	6660	11,323,145 – 11,323,258	-	5	117	89.01	-1.83	0.74	0.687108
4156	3R_DroMel_CAF1	11,323,615 – 11,323,724	- - - - - - - - -	6661	11,323,615 – 11,323,724	+	5	120	84.72	-1.64	0.77	0.638574
4157	3R_DroMel_CAF1	11,323,870 – 11,323,968	- - - - - - - - -	6662	11,323,870 – 11,323,968	+	4	113	81.51	-1.72	0.63	0.552685
4158	3R_DroMel_CAF1	11,324,326 – 11,324,479	- - - - - - - - -	6663	11,324,326 – 11,324,440	+	5	120	94.85	-1.43	0.92	0.931222
				6664	11,324,326 – 11,324,440	-	5	120	94.85	-2.83	0.95	0.999967
				6665	11,324,360 – 11,324,479	-	5	120	97.99	-1.99	0.89	0.979159
4159	3R_DroMel_CAF1	11,325,168 – 11,325,407	- - - - - - - - -	6666	11,325,168 – 11,325,287	-	5	120	98.49	-1.21	0.97	0.642329
				6667	11,325,207 – 11,325,327	-	5	120	99.00	-2.39	0.99	0.999268
				6668	11,325,247 – 11,325,367	+	5	120	98.67	-3.02	0.98	0.999864
				6669	11,325,247 – 11,325,367	-	5	120	98.67	-4.33	0.99	0.999757
				6670	11,325,287 – 11,325,407	+	5	120	98.33	-3.29	0.96	0.999895
				6671	11,325,287 – 11,325,407	-	5	120	98.33	-4.23	0.98	0.999840
4160	3R_DroMel_CAF1	11,325,437 – 11,325,552	- - - - - - - - -	6672	11,325,437 – 11,325,552	-	5	120	92.72	-1.99	0.90	0.996206
4161	3R_DroMel_CAF1	11,325,592 – 11,325,692	- - - - - - - - -	6673	11,325,592 – 11,325,692	-	4	102	80.78	-1.51	0.75	0.550144
4162	3R_DroMel_CAF1	11,326,695 – 11,326,942	- - - - - - - - -	6674	11,326,695 – 11,326,810	-	5	120	95.11	-1.74	0.88	0.967928
				6675	11,326,810 – 11,326,902	+	4	107	83.58	-2.16	0.71	0.903846
				6676	11,326,823 – 11,326,942	+	5	120	89.46	-2.06	0.79	0.934862
4163	3R_DroMel_CAF1	11,327,196 – 11,327,298	- - - - - - - - -	6677	11,327,196 – 11,327,298	+	4	120	84.08	-2.27	0.83	0.963833
4164	3R_DroMel_CAF1	11,327,646 – 11,327,805	- - - - - - - - -	6678	11,327,646 – 11,327,766	+	5	120	96.33	-1.13	0.94	0.595760
4164	3R_DroMel_CAF1	11,327,646 – 11,327,805	- - - - - - - - -	6679	11,327,686 – 11,327,805	+	5	120	98.83	-1.44	0.98	0.892519
4165	3R_DroMel_CAF1	11,327,969 – 11,328,165	- - - - - - - - -	6680	11,327,969 – 11,328,089	-	5	120	91.32	-2.76	0.82	0.997328
				6681	11,328,009 – 11,328,126	-	5	120	83.96	-1.75	0.66	0.554358
				6682	11,328,049 – 11,328,165	+	5	120	82.44	-3.04	0.56	0.968888
4166	3R_DroMel_CAF1	11,328,676 – 11,328,788	- - - - - - - - -	6683	11,328,676 – 11,328,788	-	5	120	90.46	-1.13	0.98	0.637158
4167	3R_DroMel_CAF1	11,329,131 – 11,329,240	- - - - - - - - -	6684	11,329,131 – 11,329,240	+	5	120	85.70	-1.70	0.71	0.587806
4167	3R_DroMel_CAF1	11,329,131 – 11,329,240	- - - - - - - - -	6685	11,329,131 – 11,329,240	-	5	120	85.70	-2.65	0.60	0.737680
4168	3R_DroMel_CAF1	11,329,299 – 11,329,417	- - - - - - - - -	6686	11,329,299 – 11,329,417	+	5	120	88.86	-2.38	0.92	0.999095
4169	3R_DroMel_CAF1	11,329,969 – 11,330,084	- - - - - - - - -	6687	11,329,969 – 11,330,084	-	5	120	95.56	-1.70	0.92	0.986514
4170	3R_DroMel_CAF1	11,330,880 – 11,331,040	- - - - - - - - -	6688	11,330,880 – 11,331,000	+	5	120	97.00	-1.52	0.87	0.790325
				6689	11,330,880 – 11,331,000	-	5	120	97.00	-2.89	0.95	0.999924
				6690	11,330,920 – 11,331,040	-	5	120	96.42	-1.25	0.94	0.801749
4171	3R_DroMel_CAF1	11,331,160 – 11,331,310	- - - - - - - - -	6691	11,331,160 – 11,331,270	-	5	120	91.88	-2.10	0.93	0.998995
4171	3R_DroMel_CAF1	11,331,160 – 11,331,310	- - - - - - - - -	6692	11,331,194 – 11,331,310	-	5	120	92.76	-1.65	0.90	0.976088
4172	3R_DroMel_CAF1	11,331,326 – 11,331,509	- - - - - - - - -	6693	11,331,326 – 11,331,438	+	5	120	92.19	-2.51	0.81	0.990796
				6694	11,331,326 – 11,331,438	-	5	120	92.19	-2.66	0.91	0.999872
				6695	11,331,398 – 11,331,509	-	5	120	92.29	-1.95	0.84	0.975971
4173	3R_DroMel_CAF1	11,331,748 – 11,332,132	- - - - - - - - -	6696	11,331,748 – 11,331,853	-	3	105	82.84	-1.98	0.63	0.533925
				6697	11,331,853 – 11,331,972	+	5	120	90.70	-1.45	0.81	0.635763
				6698	11,331,972 – 11,332,092	+	5	120	93.16	-1.93	0.99	0.999441
				6699	11,332,012 – 11,332,132	+	5	120	95.67	-1.55	0.96	0.983971
4174	3R_DroMel_CAF1	11,332,418 – 11,332,529	- - - - - - - - -	6700	11,332,418 – 11,332,529	-	5	120	90.92	-1.59	0.75	0.546364
4175	3R_DroMel_CAF1	11,332,569 – 11,332,963	- - - - - - - - -	6701	11,332,569 – 11,332,682	+	5	120	96.20	-1.43	0.94	0.933201
				6702	11,332,569 – 11,332,682	-	5	120	96.20	-1.82	0.90	0.985191
				6703	11,332,649 – 11,332,748	-	5	120	78.51	-1.75	0.56	0.540751
				6704	11,332,748 – 11,332,866	+	5	120	95.29	-1.53	0.85	0.799428
				6705	11,332,828 – 11,332,939	+	5	120	94.24	-1.15	0.90	0.573774
				6706	11,332,866 – 11,332,963	+	5	120	90.21	-1.87	0.88	0.979652
4176	3R_DroMel_CAF1	11,333,857 – 11,333,977	- - - "knownCDS=Parent=FBtr0083156, FBtr0083157;Name=CG14872-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14872-RB, FlyBase+Annotation+IDs:CG14872-RA" - - - - -	6707	11,333,857 – 11,333,977	-	5	120	85.75	-1.95	0.66	0.595548
4177	3R_DroMel_CAF1	11,334,257 – 11,334,405	- - - - - - - - -	6708	11,334,257 – 11,334,372	-	5	120	76.72	-1.84	0.50	0.632544
4177	3R_DroMel_CAF1	11,334,257 – 11,334,405	- - - - - - - - -	6709	11,334,297 – 11,334,405	-	5	120	76.48	-1.84	0.57	0.779628
4178	3R_DroMel_CAF1	11,334,639 – 11,334,737	- - - - - - - - -	6710	11,334,639 – 11,334,737	-	3	114	85.67	-2.05	0.70	0.594029
4179	3R_DroMel_CAF1	11,337,419 – 11,337,673	- - - - - - - - -	6711	11,337,419 – 11,337,539	+	5	120	98.00	-2.51	0.98	0.999789
				6712	11,337,419 – 11,337,539	-	5	120	98.00	-1.31	0.92	0.689869
				6713	11,337,539 – 11,337,633	+	5	120	80.46	-2.01	0.76	0.923926
				6714	11,337,539 – 11,337,633	-	5	120	80.46	-2.27	0.72	0.961635
				6715	11,337,573 – 11,337,673	+	5	120	79.35	-1.70	0.69	0.743754
4180	3R_DroMel_CAF1	11,338,205 – 11,338,456	- - - - - - - - -	6716	11,338,205 – 11,338,313	+	5	120	88.74	-1.39	0.91	0.734319
				6717	11,338,233 – 11,338,353	+	5	120	94.00	-1.67	0.84	0.903095
				6718	11,338,353 – 11,338,456	+	5	120	91.26	-1.26	0.98	0.857870
4181	3R_DroMel_CAF1	11,338,921 – 11,339,039	- - - - - - - - -	6719	11,338,921 – 11,339,039	-	4	120	86.13	-1.84	0.80	0.825215
4182	3R_DroMel_CAF1	11,339,227 – 11,339,341	- - - - - - - - -	6720	11,339,227 – 11,339,341	+	5	120	81.55	-2.25	0.57	0.830309
4183	3R_DroMel_CAF1	11,340,599 – 11,341,039	- - - - - - - - -	6721	11,340,599 – 11,340,713	-	5	120	93.89	-1.60	0.93	0.981578
				6722	11,340,639 – 11,340,753	+	5	120	92.80	-1.84	0.80	0.865945
				6723	11,340,753 – 11,340,863	+	5	120	94.56	-1.66	0.81	0.783986
				6724	11,340,753 – 11,340,863	-	5	120	94.56	-2.16	0.91	0.998715
				6725	11,340,783 – 11,340,903	+	5	120	99.00	-1.51	0.98	0.923401
				6726	11,340,783 – 11,340,903	-	5	120	99.00	-2.29	0.99	0.999003
				6727	11,340,823 – 11,340,919	-	5	120	87.66	-2.24	0.85	0.986105
				6728	11,340,863 – 11,340,959	-	5	120	88.02	-1.96	0.87	0.973347
				6729	11,340,919 – 11,341,039	-	5	120	97.50	-1.12	0.96	0.554464
4184	3R_DroMel_CAF1	11,341,261 – 11,341,381	- - - - - - - - -	6730	11,341,261 – 11,341,381	+	5	120	95.67	-1.26	0.89	0.650098
4185	3R_DroMel_CAF1	11,341,788 – 11,341,883	- - - - - - - - -	6731	11,341,788 – 11,341,883	+	4	100	84.27	-1.55	0.81	0.632714
4185	3R_DroMel_CAF1	11,341,788 – 11,341,883	- - - - - - - - -	6732	11,341,788 – 11,341,883	-	4	100	84.27	-1.61	0.65	0.521155
4186	3R_DroMel_CAF1	11,342,136 – 11,342,256	- - - - - - - - -	6733	11,342,136 – 11,342,256	+	5	120	95.17	-2.08	0.84	0.979191
4187	3R_DroMel_CAF1	11,342,558 – 11,342,653	- - - - - - - - -	6734	11,342,558 – 11,342,653	+	5	120	84.50	-2.53	0.65	0.894841
4188	3R_DroMel_CAF1	11,343,224 – 11,343,454	- - - - - - - - -	6735	11,343,224 – 11,343,344	-	5	120	97.00	-1.18	0.91	0.506918
				6736	11,343,264 – 11,343,384	-	5	120	97.50	-1.83	0.97	0.995654
				6737	11,343,304 – 11,343,414	-	5	120	86.65	-2.26	0.73	0.892871
				6738	11,343,344 – 11,343,454	-	5	120	78.80	-2.63	0.74	0.994866
4189	3R_DroMel_CAF1	11,344,111 – 11,344,220	- - - - - - - - -	6739	11,344,111 – 11,344,220	+	5	120	90.00	-1.21	0.91	0.571399
4190	3R_DroMel_CAF1	11,344,425 – 11,344,809	- - - - - - - - -	6740	11,344,425 – 11,344,519	+	4	97	95.48	-1.92	0.89	0.826766
				6741	11,344,425 – 11,344,519	-	4	97	95.48	-2.39	0.95	0.976987
				6742	11,344,447 – 11,344,559	+	5	120	95.84	-2.62	0.91	0.999693
				6743	11,344,447 – 11,344,559	-	5	120	95.84	-2.38	0.86	0.996280
				6744	11,344,487 – 11,344,599	+	5	120	94.29	-2.17	0.92	0.999153
				6745	11,344,487 – 11,344,599	-	5	120	94.29	-2.01	0.85	0.983474
				6746	11,344,559 – 11,344,661	-	5	120	86.56	-1.93	0.70	0.670623
				6747	11,344,661 – 11,344,769	+	5	120	89.98	-1.69	0.79	0.789608
				6748	11,344,697 – 11,344,809	+	5	120	93.74	-1.70	0.89	0.975957
				6749	11,344,697 – 11,344,809	-	5	120	93.74	-1.24	0.89	0.703295
4191	3R_DroMel_CAF1	11,344,845 – 11,344,956	- - - - - - - - -	6750	11,344,845 – 11,344,956	+	5	120	90.05	-1.69	0.76	0.664994
4191	3R_DroMel_CAF1	11,344,845 – 11,344,956	- - - - - - - - -	6751	11,344,845 – 11,344,956	-	5	120	90.05	-2.32	0.76	0.935421
4192	3R_DroMel_CAF1	11,345,173 – 11,345,306	- - - - - - - - -	6752	11,345,173 – 11,345,280	-	5	120	85.96	-2.13	0.65	0.662048
4192	3R_DroMel_CAF1	11,345,173 – 11,345,306	- - - - - - - - -	6753	11,345,205 – 11,345,306	-	4	106	83.58	-1.88	0.71	0.794265
4193	3R_DroMel_CAF1	11,345,333 – 11,345,558	- - - - - - - - -	6754	11,345,333 – 11,345,450	+	5	120	95.94	-1.41	0.87	0.778856
				6755	11,345,413 – 11,345,519	+	5	120	90.50	-1.63	0.75	0.570005
				6756	11,345,413 – 11,345,519	-	5	120	90.50	-1.67	0.81	0.829808
				6757	11,345,450 – 11,345,558	+	5	120	89.57	-1.87	0.85	0.959876
				6758	11,345,450 – 11,345,558	-	5	120	89.57	-2.31	0.82	0.988230
4194	3R_DroMel_CAF1	11,346,378 – 11,346,482	- - - - - - - - -	6759	11,346,378 – 11,346,482	-	5	120	84.05	-1.64	0.67	0.507859
4195	3R_DroMel_CAF1	11,348,151 – 11,348,252	- - - - - - - - -	6760	11,348,151 – 11,348,252	+	5	120	88.67	-1.35	0.90	0.658565
4196	3R_DroMel_CAF1	11,348,514 – 11,348,618	- - - - - - - - -	6761	11,348,514 – 11,348,618	-	5	120	80.48	-1.56	0.66	0.505045
4197	3R_DroMel_CAF1	11,348,753 – 11,348,871	- - - - - - - - -	6762	11,348,753 – 11,348,871	+	5	120	95.45	-2.09	0.91	0.997923
4197	3R_DroMel_CAF1	11,348,753 – 11,348,871	- - - - - - - - -	6763	11,348,753 – 11,348,871	-	5	120	95.45	-1.07	0.93	0.513923
4198	3R_DroMel_CAF1	11,349,254 – 11,349,494	- - - - - - - - -	6764	11,349,254 – 11,349,374	+	5	120	94.63	-2.54	0.89	0.999509
				6765	11,349,254 – 11,349,374	-	5	120	94.63	-2.20	0.94	0.999624
				6766	11,349,294 – 11,349,414	-	5	120	98.65	-1.33	0.98	0.817602
				6767	11,349,334 – 11,349,454	+	5	120	92.25	-1.55	0.90	0.947433
				6768	11,349,334 – 11,349,454	-	5	120	92.25	-1.65	0.85	0.926696
				6769	11,349,374 – 11,349,494	+	4	120	81.78	-2.06	0.69	0.884585
4199	3R_DroMel_CAF1	11,349,608 – 11,349,827	- - - - - - - - -	6770	11,349,608 – 11,349,716	-	3	108	92.90	-2.05	0.86	0.680595
4199	3R_DroMel_CAF1	11,349,608 – 11,349,827	- - - - - - - - -	6771	11,349,716 – 11,349,827	-	4	120	92.62	-2.71	0.71	0.565178
4200	3R_DroMel_CAF1	11,349,946 – 11,350,085	- - - - - - - - -	6772	11,349,946 – 11,350,046	+	5	120	84.51	-1.41	0.90	0.525378
4200	3R_DroMel_CAF1	11,349,946 – 11,350,085	- - - - - - - - -	6773	11,349,972 – 11,350,085	+	5	120	92.02	-1.17	0.89	0.549845
4201	3R_DroMel_CAF1	11,350,266 – 11,350,408	- - - - - - - - -	6774	11,350,266 – 11,350,386	+	5	120	92.91	-1.84	0.79	0.856789
				6775	11,350,266 – 11,350,386	-	5	120	92.91	-2.88	0.90	0.999908
				6776	11,350,306 – 11,350,408	+	5	120	85.79	-1.92	0.67	0.602999
				6777	11,350,306 – 11,350,408	-	5	120	85.79	-1.82	0.90	0.923562
4202	3R_DroMel_CAF1	11,350,924 – 11,351,038	- - - - - - - - -	6778	11,350,924 – 11,351,038	-	5	120	88.92	-1.67	0.73	0.574716
4203	3R_DroMel_CAF1	11,351,078 – 11,351,190	- - - - - - - - -	6779	11,351,078 – 11,351,190	+	5	120	91.26	-1.37	0.84	0.660307
4204	3R_DroMel_CAF1	11,352,044 – 11,352,156	- - - - - - - - -	6780	11,352,044 – 11,352,156	+	5	120	93.40	-2.08	0.82	0.964870
4205	3R_DroMel_CAF1	11,352,409 – 11,352,508	- - - - - - - - -	6781	11,352,409 – 11,352,508	+	5	120	69.37	-1.81	0.57	0.930309
4206	3R_DroMel_CAF1	11,352,538 – 11,352,695	- - - - - - - - -	6782	11,352,538 – 11,352,655	+	5	120	91.05	-2.09	0.79	0.938240
				6783	11,352,538 – 11,352,655	-	5	120	91.05	-1.64	0.74	0.507111
				6784	11,352,575 – 11,352,695	+	5	120	98.00	-2.61	0.96	0.999721
				6785	11,352,575 – 11,352,695	-	5	120	98.00	-3.51	0.94	0.999851
4207	3R_DroMel_CAF1	11,353,779 – 11,353,930	- - - - - - - - -	6786	11,353,779 – 11,353,890	+	4	117	89.97	-1.92	0.86	0.906194
				6787	11,353,816 – 11,353,930	+	5	120	87.51	-2.17	0.71	0.789673
				6788	11,353,816 – 11,353,930	-	5	120	87.51	-2.52	0.75	0.955069
4208	3R_DroMel_CAF1	11,354,255 – 11,354,481	- - - - - - - - -	6789	11,354,255 – 11,354,365	+	5	120	92.28	-2.00	0.82	0.958607
				6790	11,354,255 – 11,354,365	-	5	120	92.28	-1.56	0.85	0.877798
				6791	11,354,365 – 11,354,481	+	5	120	98.30	-1.24	1.00	0.755778
				6792	11,354,365 – 11,354,481	-	5	120	98.30	-1.58	0.97	0.963927
4209	3R_DroMel_CAF1	11,354,677 – 11,354,913	- - - - - - - - -	6793	11,354,677 – 11,354,797	+	5	120	98.17	-1.47	0.94	0.889533
				6794	11,354,717 – 11,354,837	+	5	120	92.49	-1.08	0.99	0.680461
				6795	11,354,757 – 11,354,875	+	5	120	82.83	-1.60	0.83	0.662197
				6796	11,354,797 – 11,354,913	+	5	120	81.97	-1.75	0.75	0.745004
4210	3R_DroMel_CAF1	11,355,569 – 11,355,682	- - - - - - - - -	6797	11,355,569 – 11,355,682	-	5	120	95.16	-1.17	0.93	0.701924
4211	3R_DroMel_CAF1	11,355,853 – 11,356,029	- - - - - - - - -	6798	11,355,853 – 11,355,949	+	5	120	80.46	-2.89	0.70	0.995205
4211	3R_DroMel_CAF1	11,355,853 – 11,356,029	- - - - - - - - -	6799	11,355,915 – 11,356,029	-	5	120	93.06	-1.62	0.88	0.946790
4212	3R_DroMel_CAF1	11,357,649 – 11,357,857	- - - - - - - - -	6800	11,357,649 – 11,357,760	-	5	120	92.84	-3.04	0.95	0.999985
				6801	11,357,689 – 11,357,800	-	5	120	94.07	-3.28	0.83	0.998642
				6802	11,357,760 – 11,357,857	-	4	104	95.52	-1.69	0.91	0.740515
4213	3R_DroMel_CAF1	11,358,567 – 11,358,687	- - - "knownCDS=Parent=FBtr0083154;Name=CG18522-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18522-RA" - - - - -	6803	11,358,567 – 11,358,687	-	5	120	95.83	-1.33	0.91	0.831315
4214	3R_DroMel_CAF1	11,358,964 – 11,359,204	- - - "knownCDS=Parent=FBtr0083154;Name=CG18522-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18522-RA" - - - - -	6804	11,358,964 – 11,359,084	-	5	120	94.58	-1.49	0.92	0.948160
4214	3R_DroMel_CAF1	11,358,964 – 11,359,204		6805	11,359,084 – 11,359,204	-	5	120	92.50	-1.52	0.86	0.878717
4215	3R_DroMel_CAF1	11,359,404 – 11,359,524	- - - "knownCDS=Parent=FBtr0083154;Name=CG18522-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18522-RA" - - - - -	6806	11,359,404 – 11,359,524	+	5	120	91.17	-2.14	0.88	0.995800
4216	3R_DroMel_CAF1	11,359,684 – 11,359,924	- - - "knownCDS=Parent=FBtr0083154;Name=CG18522-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18522-RA" - - - - -	6807	11,359,684 – 11,359,804	-	5	120	95.67	-1.17	0.90	0.572320
				6808	11,359,724 – 11,359,844	-	5	120	94.17	-1.56	0.84	0.822180
				6809	11,359,764 – 11,359,884	+	5	120	94.50	-2.94	0.88	0.999790
				6810	11,359,804 – 11,359,924	+	5	120	92.50	-2.69	0.86	0.999253
				6811	11,359,804 – 11,359,924	-	5	120	92.50	-2.70	0.83	0.997793
4217	3R_DroMel_CAF1	11,359,964 – 11,360,324	- - - "knownCDS=Parent=FBtr0083154;Name=CG18522-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18522-RA" - - - - -	6812	11,359,964 – 11,360,084	+	5	120	93.25	-1.60	0.91	0.971390
				6813	11,360,084 – 11,360,204	-	5	120	86.50	-1.55	0.76	0.555187
				6814	11,360,124 – 11,360,244	-	5	120	89.92	-1.58	0.83	0.798826
				6815	11,360,164 – 11,360,284	-	5	120	94.75	-1.32	0.87	0.683507
				6816	11,360,204 – 11,360,324	+	5	120	96.50	-1.16	0.96	0.729437
4218	3R_DroMel_CAF1	11,361,121 – 11,361,241	- - - "knownCDS=Parent=FBtr0083154;Name=CG18522-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18522-RA" - - - - -	6817	11,361,121 – 11,361,241	+	5	120	97.00	-1.07	0.96	0.500000
4219	3R_DroMel_CAF1	11,361,601 – 11,361,791	- - - "knownCDS=Parent=FBtr0083154;Name=CG18522-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18522-RA" - - - - -	6818	11,361,601 – 11,361,691	+	4	90	92.59	-2.39	0.87	0.965309
4219	3R_DroMel_CAF1	11,361,601 – 11,361,791		6819	11,361,691 – 11,361,791	+	4	100	96.50	-2.28	0.99	0.971912
4220	3R_DroMel_CAF1	11,363,743 – 11,363,903	- - - "knownCDS=Parent=FBtr0083152, FBtr0083153;Name=CG18519-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18519-RA, FlyBase+Annotation+IDs:CG18519-RB" - - - - -	6820	11,363,743 – 11,363,863	+	5	120	93.58	-1.68	0.88	0.963930
4220	3R_DroMel_CAF1	11,363,743 – 11,363,903		6821	11,363,783 – 11,363,903	-	5	120	94.25	-1.16	0.89	0.549386
4221	3R_DroMel_CAF1	11,364,063 – 11,364,383	- - - "knownCDS=Parent=FBtr0083152, FBtr0083153;Name=CG18519-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18519-RA, FlyBase+Annotation+IDs:CG18519-RB" - - - - -	6822	11,364,063 – 11,364,183	+	5	120	94.83	-2.30	0.93	0.999649
				6823	11,364,063 – 11,364,183	-	5	120	94.83	-1.75	0.92	0.991295
				6824	11,364,183 – 11,364,303	+	5	120	96.33	-1.41	0.95	0.935062
				6825	11,364,263 – 11,364,383	+	5	120	93.25	-1.44	0.86	0.827324
4222	3R_DroMel_CAF1	11,365,061 – 11,365,261	- - - "knownCDS=Parent=FBtr0083153;Name=CG18519-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18519-RB" - - - - -	6826	11,365,061 – 11,365,181	+	5	120	92.67	-1.52	0.83	0.779637
				6827	11,365,061 – 11,365,181	-	5	120	92.67	-1.41	0.86	0.802197
				6828	11,365,141 – 11,365,261	+	5	120	92.50	-1.13	0.89	0.510682
4223	3R_DroMel_CAF1	11,365,621 – 11,365,741	- - - "knownCDS=Parent=FBtr0083153;Name=CG18519-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18519-RB" - - - - -	6829	11,365,621 – 11,365,741	-	5	120	92.58	-2.06	0.85	0.988410
4224	3R_DroMel_CAF1	11,366,009 – 11,366,209	- - - "knownCDS=Parent=FBtr0083152;Name=CG18519-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18519-RA" - - - - -	6830	11,366,009 – 11,366,129	+	5	120	93.00	-1.77	0.77	0.656315
				6831	11,366,049 – 11,366,169	+	5	120	92.50	-1.98	0.85	0.982030
				6832	11,366,049 – 11,366,169	-	5	120	92.50	-2.19	0.82	0.981668
				6833	11,366,089 – 11,366,209	-	5	120	94.25	-2.38	0.84	0.994275
4225	3R_DroMel_CAF1	11,367,040 – 11,367,200	- - - "knownCDS=Parent=FBtr0083152, FBtr0083153;Name=CG18519-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18519-RA, FlyBase+Annotation+IDs:CG18519-RB" - - - - -	6834	11,367,040 – 11,367,160	+	5	120	98.00	-1.92	0.98	0.996854
4225	3R_DroMel_CAF1	11,367,040 – 11,367,200		6835	11,367,080 – 11,367,200	+	5	120	96.83	-2.60	0.96	0.999880
4226	3R_DroMel_CAF1	11,367,240 – 11,367,360	- - - "knownCDS=Parent=FBtr0083152, FBtr0083153;Name=CG18519-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18519-RA, FlyBase+Annotation+IDs:CG18519-RB" - - - - -	6836	11,367,240 – 11,367,360	-	5	120	92.42	-1.21	0.86	0.530603
4227	3R_DroMel_CAF1	11,367,840 – 11,368,040	- - - "knownCDS=Parent=FBtr0083152;Name=CG18519-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18519-RA" - - - - -	6837	11,367,840 – 11,367,960	+	5	120	91.61	-1.49	0.80	0.630757
				6838	11,367,880 – 11,368,000	+	5	120	97.50	-1.30	0.94	0.765382
				6839	11,367,920 – 11,368,040	+	5	120	97.83	-3.10	0.93	0.999780
				6840	11,367,920 – 11,368,040	-	5	120	97.83	-1.66	0.94	0.972634
4228	3R_DroMel_CAF1	11,369,184 – 11,369,580	- - - - - - - - -	6841	11,369,184 – 11,369,304	+	5	120	95.33	-1.46	0.87	0.845483
				6842	11,369,184 – 11,369,304	-	5	120	95.33	-1.67	0.93	0.988305
				6843	11,369,224 – 11,369,344	+	5	120	96.17	-1.29	0.93	0.825713
				6844	11,369,224 – 11,369,344	-	5	120	96.17	-2.06	0.97	0.999404
				6845	11,369,264 – 11,369,384	-	5	120	96.00	-2.57	0.93	0.999799
				6846	11,369,304 – 11,369,424	-	5	120	94.17	-1.50	0.90	0.939156
				6847	11,369,344 – 11,369,463	+	5	120	90.95	-2.58	0.74	0.907287
				6848	11,369,344 – 11,369,463	-	5	120	90.95	-1.48	0.77	0.528080
				6849	11,369,424 – 11,369,541	-	5	120	92.47	-1.86	0.90	0.992255
				6850	11,369,463 – 11,369,580	-	5	120	92.30	-1.48	0.92	0.947264
4229	3R_DroMel_CAF1	11,370,252 – 11,370,372	- - - "knownCDS=Parent=FBtr0083151;Name=CG6045-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6045-RA" - - - - -	6851	11,370,252 – 11,370,372	-	5	120	96.50	-1.36	0.87	0.656185
4230	3R_DroMel_CAF1	11,371,567 – 11,371,685	- - - - - - - - -	6852	11,371,567 – 11,371,685	+	5	120	87.86	-1.99	0.79	0.903450
4230	3R_DroMel_CAF1	11,371,567 – 11,371,685	- - - - - - - - -	6853	11,371,567 – 11,371,685	-	5	120	87.86	-2.09	0.74	0.843658
4231	3R_DroMel_CAF1	11,372,443 – 11,372,563	- - - "knownCDS=Parent=FBtr0083151;Name=CG6045-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6045-RA" - - - - -	6854	11,372,443 – 11,372,563	+	5	120	96.17	-1.11	0.96	0.649855
4232	3R_DroMel_CAF1	11,373,695 – 11,373,809	- - - - - - - - -	6855	11,373,695 – 11,373,809	+	5	120	76.09	-2.23	0.21	0.967573
4233	3R_DroMel_CAF1	11,374,003 – 11,374,180	- - - - - - - - -	6856	11,374,003 – 11,374,114	+	5	120	83.87	-3.46	0.78	0.998427
				6857	11,374,003 – 11,374,114	-	5	120	83.87	-4.08	0.79	0.999319
				6858	11,374,036 – 11,374,140	+	5	120	81.06	-2.39	0.72	0.970955
				6859	11,374,036 – 11,374,140	-	5	120	81.06	-2.92	0.55	0.981809
				6860	11,374,074 – 11,374,180	-	5	120	81.30	-1.48	0.71	0.500000
4234	3R_DroMel_CAF1	11,374,629 – 11,374,829	- - - "knownCDS=Parent=FBtr0083150;Name=CG18516-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18516-RA" - - - - -	6861	11,374,629 – 11,374,749	-	5	120	95.67	-1.41	0.94	0.935111
				6862	11,374,669 – 11,374,789	-	5	120	95.00	-1.32	0.99	0.942877
				6863	11,374,709 – 11,374,829	-	5	120	94.00	-1.07	0.95	0.611432
4235	3R_DroMel_CAF1	11,374,949 – 11,375,069	- - - "knownCDS=Parent=FBtr0083150;Name=CG18516-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18516-RA" - - - - -	6864	11,374,949 – 11,375,069	+	5	120	91.50	-1.81	0.84	0.952408
4235	3R_DroMel_CAF1	11,374,949 – 11,375,069		6865	11,374,949 – 11,375,069	-	5	120	91.50	-2.38	0.83	0.993152
4236	3R_DroMel_CAF1	11,375,186 – 11,375,419	- - - "knownCDS=Parent=FBtr0083150;Name=CG18516-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18516-RA" - - - - -	6866	11,375,186 – 11,375,299	-	5	120	86.46	-2.71	0.91	0.999129
				6867	11,375,219 – 11,375,339	-	5	120	92.83	-1.90	0.94	0.997880
				6868	11,375,299 – 11,375,419	-	5	120	92.58	-1.77	0.87	0.970671
4237	3R_DroMel_CAF1	11,375,579 – 11,375,739	- - - "knownCDS=Parent=FBtr0083150;Name=CG18516-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18516-RA" - - - - -	6869	11,375,579 – 11,375,699	-	5	120	95.33	-1.43	0.94	0.947104
4237	3R_DroMel_CAF1	11,375,579 – 11,375,739		6870	11,375,619 – 11,375,739	+	5	120	95.92	-1.71	0.88	0.953588
4238	3R_DroMel_CAF1	11,375,939 – 11,376,058	- - - "knownCDS=Parent=FBtr0083150;Name=CG18516-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18516-RA" - - - - -	6871	11,375,939 – 11,376,058	+	5	120	89.48	-1.17	0.96	0.589246
4239	3R_DroMel_CAF1	11,376,298 – 11,376,618	- - - "knownCDS=Parent=FBtr0083150;Name=CG18516-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18516-RA" - - - - -	6872	11,376,298 – 11,376,418	-	5	120	91.50	-1.46	0.84	0.754870
				6873	11,376,418 – 11,376,538	-	5	120	94.42	-1.31	0.88	0.728566
				6874	11,376,458 – 11,376,578	+	5	120	93.58	-1.21	0.90	0.699519
				6875	11,376,458 – 11,376,578	-	5	120	93.58	-2.28	0.91	0.999410
				6876	11,376,498 – 11,376,618	-	5	120	94.67	-1.22	0.90	0.693120
4240	3R_DroMel_CAF1	11,377,255 – 11,377,375	- - - "knownCDS=Parent=FBtr0083150;Name=CG18516-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18516-RA" - - - - -	6877	11,377,255 – 11,377,375	-	5	120	91.83	-1.56	0.89	0.936182
4241	3R_DroMel_CAF1	11,377,855 – 11,378,015	- - - "knownCDS=Parent=FBtr0083150;Name=CG18516-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18516-RA" - - - - -	6878	11,377,855 – 11,377,975	-	5	120	96.50	-1.56	0.91	0.940996
4241	3R_DroMel_CAF1	11,377,855 – 11,378,015		6879	11,377,895 – 11,378,015	-	5	120	96.50	-1.82	0.88	0.971006
4242	3R_DroMel_CAF1	11,379,858 – 11,379,965	- - - - - - - - -	6880	11,379,858 – 11,379,965	-	4	117	88.24	-2.55	0.76	0.942450
4243	3R_DroMel_CAF1	11,381,520 – 11,381,663	- - - - - - - - -	6881	11,381,520 – 11,381,633	-	5	120	90.82	-1.48	0.76	0.507970
4243	3R_DroMel_CAF1	11,381,520 – 11,381,663	- - - - - - - - -	6882	11,381,560 – 11,381,663	+	5	120	82.81	-2.03	0.65	0.759017
4244	3R_DroMel_CAF1	11,382,696 – 11,382,800	- - - - - - - - -	6883	11,382,696 – 11,382,800	-	5	120	85.94	-1.65	0.75	0.621362
4245	3R_DroMel_CAF1	11,383,188 – 11,383,336	- - - - - - - - -	6884	11,383,188 – 11,383,296	+	5	120	92.15	-2.16	0.86	0.994195
				6885	11,383,188 – 11,383,296	-	5	120	92.15	-1.66	0.88	0.956670
				6886	11,383,216 – 11,383,336	+	5	120	96.67	-1.46	0.93	0.935125
				6887	11,383,216 – 11,383,336	-	5	120	96.67	-1.11	0.94	0.535365
4246	3R_DroMel_CAF1	11,383,856 – 11,384,055	- - - - - - - - -	6888	11,383,856 – 11,383,976	+	5	120	96.83	-2.34	0.92	0.999007
				6889	11,383,856 – 11,383,976	-	5	120	96.83	-2.64	0.93	0.999736
				6890	11,383,896 – 11,384,016	-	5	120	92.20	-2.05	0.87	0.993169
				6891	11,383,936 – 11,384,055	+	5	120	89.26	-2.00	0.76	0.847621
				6892	11,383,936 – 11,384,055	-	5	120	89.26	-2.79	0.78	0.989086
4247	3R_DroMel_CAF1	11,384,095 – 11,384,215	- - - - - - - - -	6893	11,384,095 – 11,384,215	+	5	120	97.33	-1.25	0.97	0.808514
4248	3R_DroMel_CAF1	11,385,011 – 11,385,163	- - - - - - - - -	6894	11,385,011 – 11,385,125	+	5	120	96.91	-1.71	0.96	0.990715
				6895	11,385,011 – 11,385,125	-	5	120	96.91	-1.66	0.97	0.989701
				6896	11,385,045 – 11,385,163	+	5	120	96.31	-1.13	0.92	0.537047
				6897	11,385,045 – 11,385,163	-	5	120	96.31	-1.65	0.92	0.974078
4249	3R_DroMel_CAF1	11,385,887 – 11,385,999	- - - - - - - - -	6898	11,385,887 – 11,385,999	-	5	120	91.17	-1.51	0.76	0.500000
4250	3R_DroMel_CAF1	11,386,708 – 11,386,907	- - - - - - - - -	6899	11,386,708 – 11,386,828	-	5	120	95.33	-1.29	0.86	0.566674
4250	3R_DroMel_CAF1	11,386,708 – 11,386,907	- - - - - - - - -	6900	11,386,788 – 11,386,907	+	5	120	96.16	-2.44	0.91	0.999438
4251	3R_DroMel_CAF1	11,387,091 – 11,387,202	- - - - - - - - -	6901	11,387,091 – 11,387,202	-	5	120	92.19	-1.36	0.96	0.935411
4252	3R_DroMel_CAF1	11,387,386 – 11,387,506	- - - - - - - - -	6902	11,387,386 – 11,387,506	-	5	120	93.30	-1.71	0.76	0.559038
4253	3R_DroMel_CAF1	11,388,051 – 11,388,243	- - - - - - - - -	6903	11,388,051 – 11,388,171	+	5	120	95.83	-1.39	0.89	0.807070
				6904	11,388,051 – 11,388,171	-	5	120	95.83	-2.13	0.93	0.999046
				6905	11,388,091 – 11,388,210	-	5	120	94.64	-1.33	0.87	0.702668
				6906	11,388,131 – 11,388,243	+	5	120	92.01	-1.26	0.86	0.599497
4254	3R_DroMel_CAF1	11,388,942 – 11,389,042	- - - - - - - - -	6907	11,388,942 – 11,389,042	+	3	100	96.67	-1.91	0.94	0.770245
4255	3R_DroMel_CAF1	11,389,581 – 11,389,696	- - - - - - - - -	6908	11,389,581 – 11,389,696	+	5	120	96.41	-1.67	0.96	0.990026
4255	3R_DroMel_CAF1	11,389,581 – 11,389,696	- - - - - - - - -	6909	11,389,581 – 11,389,696	-	5	120	96.41	-1.54	1.01	0.988202
4256	3R_DroMel_CAF1	11,391,353 – 11,391,464	- - - - - - - - -	6910	11,391,353 – 11,391,464	-	5	120	89.11	-2.25	0.82	0.980716
4257	3R_DroMel_CAF1	11,391,785 – 11,391,883	- - - - - - - - -	6911	11,391,785 – 11,391,883	+	3	98	85.45	0.26	1.00	0.532237
4258	3R_DroMel_CAF1	11,393,188 – 11,393,297	- - - - - - - - -	6912	11,393,188 – 11,393,297	+	5	120	90.77	-1.81	0.73	0.561031
4259	3R_DroMel_CAF1	11,394,307 – 11,394,422	- - - - - - - - -	6913	11,394,307 – 11,394,422	+	5	120	94.96	-1.65	0.86	0.915073
4259	3R_DroMel_CAF1	11,394,307 – 11,394,422	- - - - - - - - -	6914	11,394,307 – 11,394,422	-	5	120	94.96	-1.66	0.85	0.900862
4260	3R_DroMel_CAF1	11,394,600 – 11,394,720	- - - - - - - - -	6915	11,394,600 – 11,394,720	+	5	120	93.08	-1.50	0.79	0.567402
4261	3R_DroMel_CAF1	11,395,868 – 11,395,988	- - - - - - - - -	6916	11,395,868 – 11,395,988	+	5	120	97.58	-1.36	0.95	0.852030
4262	3R_DroMel_CAF1	11,396,068 – 11,396,182	- - - - - - - - -	6917	11,396,068 – 11,396,182	-	5	120	89.55	-2.68	0.72	0.915397
4263	3R_DroMel_CAF1	11,396,324 – 11,396,440	- - - - - - - - -	6918	11,396,324 – 11,396,440	-	5	120	93.28	-1.30	0.83	0.514159
4264	3R_DroMel_CAF1	11,396,693 – 11,396,813	- - - - - - - - -	6919	11,396,693 – 11,396,813	+	5	120	90.83	-2.63	0.76	0.959295
4264	3R_DroMel_CAF1	11,396,693 – 11,396,813	- - - - - - - - -	6920	11,396,693 – 11,396,813	-	5	120	90.83	-1.67	0.88	0.947827
4265	3R_DroMel_CAF1	11,396,932 – 11,397,130	- - - - - - - - -	6921	11,396,932 – 11,397,052	-	5	120	94.07	-1.26	0.86	0.599222
4265	3R_DroMel_CAF1	11,396,932 – 11,397,130	- - - - - - - - -	6922	11,397,012 – 11,397,130	+	5	120	86.69	-1.57	0.72	0.500000
4266	3R_DroMel_CAF1	11,397,651 – 11,397,791	- - - - - - - - -	6923	11,397,651 – 11,397,751	+	5	120	89.72	-1.42	0.86	0.728891
4266	3R_DroMel_CAF1	11,397,651 – 11,397,791	- - - - - - - - -	6924	11,397,671 – 11,397,791	+	5	120	97.08	-1.64	0.92	0.965644
4267	3R_DroMel_CAF1	11,398,013 – 11,398,110	- - - - - - - - -	6925	11,398,013 – 11,398,110	+	4	99	95.28	-2.35	0.88	0.937939
4268	3R_DroMel_CAF1	11,398,774 – 11,399,012	- - - - - - - - -	6926	11,398,774 – 11,398,893	+	5	120	80.65	-2.79	0.62	0.987753
4268	3R_DroMel_CAF1	11,398,774 – 11,399,012	- - - - - - - - -	6927	11,398,893 – 11,399,012	+	5	120	90.69	-1.62	0.79	0.727369
4269	3R_DroMel_CAF1	11,399,052 – 11,399,144	- - - - - - - - -	6928	11,399,052 – 11,399,144	-	5	120	84.05	-2.17	0.70	0.865529
4270	3R_DroMel_CAF1	11,399,239 – 11,399,589	- - - - - - - - -	6929	11,399,239 – 11,399,338	-	5	120	90.32	-1.39	0.91	0.835978
				6930	11,399,338 – 11,399,436	-	4	99	88.43	-1.47	0.78	0.577644
				6931	11,399,357 – 11,399,474	-	5	120	88.01	-1.48	0.79	0.558557
				6932	11,399,474 – 11,399,589	-	4	120	93.05	-1.46	0.86	0.557043
4271	3R_DroMel_CAF1	11,399,817 – 11,400,094	- - - - - - - - -	6933	11,399,817 – 11,399,935	-	5	120	84.79	-2.80	0.63	0.906938
				6934	11,399,895 – 11,400,014	-	5	120	92.90	-1.65	0.86	0.937850
				6935	11,399,975 – 11,400,094	+	5	120	93.65	-1.82	0.78	0.737245
				6936	11,399,975 – 11,400,094	-	5	120	93.65	-2.41	0.82	0.987468
4272	3R_DroMel_CAF1	11,400,116 – 11,400,219	- - - - - - - - -	6937	11,400,116 – 11,400,219	+	5	120	82.92	-1.83	0.70	0.723712
4273	3R_DroMel_CAF1	11,400,588 – 11,400,707	- - - - - - - - -	6938	11,400,588 – 11,400,707	+	4	120	94.70	-2.38	0.80	0.778855
4273	3R_DroMel_CAF1	11,400,588 – 11,400,707	- - - - - - - - -	6939	11,400,588 – 11,400,707	-	4	120	94.70	-1.75	0.91	0.825496
4274	3R_DroMel_CAF1	11,401,640 – 11,401,836	- - - - - - - - -	6940	11,401,640 – 11,401,756	+	5	120	96.77	-2.50	1.01	0.999941
				6941	11,401,640 – 11,401,756	-	5	120	96.77	-2.12	0.97	0.999412
				6942	11,401,676 – 11,401,796	+	5	120	98.17	-2.12	0.95	0.997519
				6943	11,401,716 – 11,401,836	-	5	120	93.39	-1.70	0.87	0.959395
4275	3R_DroMel_CAF1	11,401,915 – 11,402,035	- - - - - - - - -	6944	11,401,915 – 11,402,035	+	5	120	94.17	-1.61	0.81	0.755577
4275	3R_DroMel_CAF1	11,401,915 – 11,402,035	- - - - - - - - -	6945	11,401,915 – 11,402,035	-	5	120	94.17	-3.20	0.86	0.999690
4276	3R_DroMel_CAF1	11,403,487 – 11,403,607	- - - - - - - - -	6946	11,403,487 – 11,403,607	-	5	120	83.45	-2.11	0.70	0.856538
4277	3R_DroMel_CAF1	11,403,796 – 11,404,010	- - "RNAmicro=f:11403911_t:11404030_strand:+_p:0.996788" - - - - - -	6947	11,403,796 – 11,403,911	+	5	120	95.47	-2.29	0.86	0.995173
				6948	11,403,796 – 11,403,911	-	5	120	95.47	-1.36	0.89	0.795146
				6949	11,403,831 – 11,403,951	+	5	120	96.25	-1.71	0.90	0.970433
				6950	11,403,831 – 11,403,951	-	5	120	96.25	-2.36	0.94	0.999671
				6951	11,403,871 – 11,403,970	-	5	120	88.64	-1.35	0.92	0.711453
				6952	11,403,911 – 11,404,010	-	5	120	89.39	-1.29	0.93	0.687471
4278	3R_DroMel_CAF1	11,404,076 – 11,404,191	- - - - - - - - -	6953	11,404,076 – 11,404,191	+	5	120	94.70	-2.47	0.90	0.999558
4278	3R_DroMel_CAF1	11,404,076 – 11,404,191	- - - - - - - - -	6954	11,404,076 – 11,404,191	-	5	120	94.70	-1.52	0.87	0.899377
4279	3R_DroMel_CAF1	11,405,046 – 11,405,154	- - - - - - - - -	6955	11,405,046 – 11,405,154	+	5	120	84.53	-2.07	0.77	0.898466
4279	3R_DroMel_CAF1	11,405,046 – 11,405,154	- - - - - - - - -	6956	11,405,046 – 11,405,154	-	5	120	84.53	-1.99	0.76	0.856735
4280	3R_DroMel_CAF1	11,405,561 – 11,405,713	- - - - - - - - -	6957	11,405,561 – 11,405,673	+	5	120	90.80	-1.96	0.78	0.893798
4280	3R_DroMel_CAF1	11,405,561 – 11,405,713	- - - - - - - - -	6958	11,405,601 – 11,405,713	-	5	120	93.58	-1.35	0.92	0.897322
4281	3R_DroMel_CAF1	11,406,110 – 11,406,269	- - - - - - - - -	6959	11,406,110 – 11,406,229	+	5	120	91.37	-1.96	0.91	0.996205
				6960	11,406,149 – 11,406,269	+	5	120	98.00	-1.75	0.93	0.975290
				6961	11,406,149 – 11,406,269	-	5	120	98.00	-1.66	0.95	0.973828
4282	3R_DroMel_CAF1	11,406,908 – 11,407,024	- - - - - - - - -	6962	11,406,908 – 11,407,024	-	3	116	95.40	-1.71	0.91	0.570346
4283	3R_DroMel_CAF1	11,407,295 – 11,407,452	- - - - - - - - -	6963	11,407,295 – 11,407,412	+	5	120	88.90	-1.79	0.71	0.541159
4283	3R_DroMel_CAF1	11,407,295 – 11,407,452	- - - - - - - - -	6964	11,407,332 – 11,407,452	+	5	120	93.08	-2.30	0.82	0.988147
4284	3R_DroMel_CAF1	11,408,589 – 11,408,741	- - - - - - - - -	6965	11,408,589 – 11,408,707	+	5	120	95.12	-1.42	0.83	0.586326
				6966	11,408,589 – 11,408,707	-	5	120	95.12	-1.71	0.89	0.977129
				6967	11,408,627 – 11,408,741	+	5	120	94.85	-3.50	0.96	0.999991
				6968	11,408,627 – 11,408,741	-	5	120	94.85	-3.17	0.93	0.999972
4285	3R_DroMel_CAF1	11,409,974 – 11,410,165	- - - - - - - - -	6969	11,409,974 – 11,410,087	+	5	120	96.20	-1.38	0.85	0.582470
				6970	11,410,014 – 11,410,125	-	3	118	91.30	-2.48	0.86	0.870289
				6971	11,410,054 – 11,410,165	-	5	120	93.22	-1.59	0.78	0.593817
4286	3R_DroMel_CAF1	11,410,355 – 11,410,573	- - - - - - - - -	6972	11,410,355 – 11,410,461	-	5	120	93.39	-1.16	0.92	0.656818
4286	3R_DroMel_CAF1	11,410,355 – 11,410,573	- - - - - - - - -	6973	11,410,461 – 11,410,573	+	5	120	90.24	-1.77	0.74	0.642905
4287	3R_DroMel_CAF1	11,411,956 – 11,412,076	- - - - - - - - -	6974	11,411,956 – 11,412,076	+	5	120	96.50	-1.37	0.87	0.630618
4287	3R_DroMel_CAF1	11,411,956 – 11,412,076	- - - - - - - - -	6975	11,411,956 – 11,412,076	-	5	120	96.50	-1.63	0.94	0.979959
4288	3R_DroMel_CAF1	11,412,276 – 11,412,385	- - - - - - - - -	6976	11,412,276 – 11,412,385	+	5	120	91.62	-2.98	0.85	0.999461
4289	3R_DroMel_CAF1	11,413,768 – 11,413,878	- - - - - - - - -	6977	11,413,768 – 11,413,878	+	5	120	93.16	-1.50	0.85	0.823155
4289	3R_DroMel_CAF1	11,413,768 – 11,413,878	- - - - - - - - -	6978	11,413,768 – 11,413,878	-	5	120	93.16	-2.01	0.86	0.988701
4290	3R_DroMel_CAF1	11,415,092 – 11,415,330	- - - - - - - - -	6979	11,415,092 – 11,415,210	+	5	120	83.32	-2.30	0.74	0.940656
				6980	11,415,210 – 11,415,330	+	5	120	96.92	-1.55	0.91	0.933805
				6981	11,415,210 – 11,415,330	-	5	120	96.92	-2.26	0.96	0.999592
4291	3R_DroMel_CAF1	11,415,450 – 11,415,565	- - - - - - - - -	6982	11,415,450 – 11,415,565	-	5	120	90.33	-1.60	0.77	0.622058
4292	3R_DroMel_CAF1	11,415,892 – 11,416,080	- - - - - - - - -	6983	11,415,892 – 11,416,011	+	5	120	97.49	-1.22	0.95	0.688421
				6984	11,415,932 – 11,416,046	-	5	120	96.40	-2.01	0.91	0.996066
				6985	11,415,971 – 11,416,080	+	5	120	93.47	-1.73	0.86	0.955897
				6986	11,415,971 – 11,416,080	-	5	120	93.47	-2.26	0.83	0.986795
4293	3R_DroMel_CAF1	11,416,274 – 11,416,648	- - - - - - - - -	6987	11,416,274 – 11,416,394	+	5	120	89.57	-2.75	0.72	0.921021
				6988	11,416,274 – 11,416,394	-	5	120	89.57	-2.06	0.73	0.760599
				6989	11,416,314 – 11,416,434	+	5	120	93.56	-1.42	0.91	0.917814
				6990	11,416,354 – 11,416,453	-	5	120	83.62	-2.40	0.76	0.963708
				6991	11,416,394 – 11,416,492	-	5	120	83.09	-1.85	0.63	0.586233
				6992	11,416,434 – 11,416,532	+	5	120	86.83	-1.47	0.82	0.567008
				6993	11,416,434 – 11,416,532	-	5	120	86.83	-3.59	0.86	0.999724
				6994	11,416,492 – 11,416,612	+	5	120	95.12	-1.37	0.92	0.897600
				6995	11,416,492 – 11,416,612	-	5	120	95.12	-1.48	0.98	0.981075
				6996	11,416,532 – 11,416,648	+	5	120	81.34	-1.88	0.58	0.578350
4294	3R_DroMel_CAF1	11,417,077 – 11,417,182	- - - - - - - - -	6997	11,417,077 – 11,417,182	+	5	120	90.12	-2.39	0.80	0.980190
4294	3R_DroMel_CAF1	11,417,077 – 11,417,182	- - - - - - - - -	6998	11,417,077 – 11,417,182	-	5	120	90.12	-2.08	0.79	0.934133
4295	3R_DroMel_CAF1	11,417,823 – 11,417,926	- - - - - - - - -	6999	11,417,823 – 11,417,926	+	5	120	87.87	-2.03	0.67	0.565750
4296	3R_DroMel_CAF1	11,418,353 – 11,418,473	- - - - - - - - -	7000	11,418,353 – 11,418,473	+	5	120	93.50	-1.41	0.83	0.664588
4297	3R_DroMel_CAF1	11,419,315 – 11,419,433	- - - - - - - - -	7001	11,419,315 – 11,419,433	-	5	120	97.64	-1.19	0.94	0.599541
4298	3R_DroMel_CAF1	11,419,471 – 11,419,586	- - - - - - - - -	7002	11,419,471 – 11,419,571	-	5	120	86.02	-1.79	0.71	0.630563
				7003	11,419,494 – 11,419,586	+	5	120	84.09	-3.20	0.71	0.992066
				7004	11,419,494 – 11,419,586	-	5	120	84.09	-2.44	0.85	0.988272
4299	3R_DroMel_CAF1	11,419,637 – 11,419,754	- - - - - - - - -	7005	11,419,637 – 11,419,754	+	5	120	91.91	-2.13	0.88	0.996822
4300	3R_DroMel_CAF1	11,419,828 – 11,419,920	- - - - - - - - -	7006	11,419,828 – 11,419,920	+	4	92	93.12	-2.57	0.93	0.991574
4300	3R_DroMel_CAF1	11,419,828 – 11,419,920	- - - - - - - - -	7007	11,419,828 – 11,419,920	-	4	92	93.12	-2.30	0.95	0.986773
4301	3R_DroMel_CAF1	11,420,571 – 11,420,683	- - - - - - - - -	7008	11,420,571 – 11,420,683	-	5	120	94.10	-1.95	0.85	0.977344
4302	3R_DroMel_CAF1	11,422,171 – 11,422,286	- - - - - - - - -	7009	11,422,171 – 11,422,286	+	5	120	91.95	-1.43	0.80	0.581854
4302	3R_DroMel_CAF1	11,422,171 – 11,422,286	- - - - - - - - -	7010	11,422,171 – 11,422,286	-	5	120	91.95	-2.05	0.76	0.823452
4303	3R_DroMel_CAF1	11,422,593 – 11,422,751	- - - - - - - - -	7011	11,422,593 – 11,422,713	-	5	120	94.67	-1.17	0.94	0.732891
4303	3R_DroMel_CAF1	11,422,593 – 11,422,751	- - - - - - - - -	7012	11,422,633 – 11,422,751	-	5	120	93.47	-1.43	0.86	0.816253
4304	3R_DroMel_CAF1	11,423,115 – 11,423,272	- - - - - - - - -	7013	11,423,115 – 11,423,232	-	5	120	93.11	-1.75	0.85	0.953289
4304	3R_DroMel_CAF1	11,423,115 – 11,423,272	- - - - - - - - -	7014	11,423,154 – 11,423,272	-	5	120	91.79	-2.28	0.87	0.997876
4305	3R_DroMel_CAF1	11,423,797 – 11,423,947	- - - - - - - - -	7015	11,423,797 – 11,423,916	-	5	120	88.69	-2.31	0.78	0.959143
4305	3R_DroMel_CAF1	11,423,797 – 11,423,947	- - - - - - - - -	7016	11,423,837 – 11,423,947	-	5	120	89.68	-2.34	0.79	0.973006
4306	3R_DroMel_CAF1	11,424,027 – 11,424,267	- - - - - - - - -	7017	11,424,027 – 11,424,147	+	5	120	97.17	-2.33	0.90	0.997965
				7018	11,424,067 – 11,424,187	+	5	120	97.17	-2.01	0.91	0.994714
				7019	11,424,147 – 11,424,267	+	5	120	94.58	-1.93	0.84	0.965260
4307	3R_DroMel_CAF1	11,424,369 – 11,424,510	- - - - - - - - -	7020	11,424,369 – 11,424,470	+	5	120	87.15	-2.39	0.86	0.993082
				7021	11,424,369 – 11,424,470	-	5	120	87.15	-3.28	0.86	0.999624
				7022	11,424,396 – 11,424,510	+	5	120	89.58	-2.85	0.84	0.998745
4308	3R_DroMel_CAF1	11,425,474 – 11,425,589	- - - - - - - - -	7023	11,425,474 – 11,425,589	+	5	120	93.33	-1.75	0.84	0.938273
4309	3R_DroMel_CAF1	11,426,750 – 11,426,949	- - - - - - - - -	7024	11,426,750 – 11,426,869	+	5	120	97.82	-1.92	0.99	0.997510
				7025	11,426,790 – 11,426,909	+	5	120	97.15	-1.47	0.92	0.899921
				7026	11,426,830 – 11,426,949	-	5	120	92.76	-1.32	0.94	0.893239
4310	3R_DroMel_CAF1	11,434,800 – 11,435,017	- - - - - - - - -	7027	11,434,800 – 11,434,915	-	5	120	94.10	-1.84	0.89	0.989057
				7028	11,434,835 – 11,434,955	+	5	120	96.17	-1.73	0.82	0.785880
				7029	11,434,835 – 11,434,955	-	5	120	96.17	-1.30	0.86	0.570567
				7030	11,434,875 – 11,434,995	+	5	120	97.50	-2.83	0.93	0.999776
				7031	11,434,915 – 11,435,017	+	5	120	87.85	-1.81	0.89	0.950787
4311	3R_DroMel_CAF1	11,435,686 – 11,435,806	- - - - - - - - -	7032	11,435,686 – 11,435,806	+	5	120	98.83	-2.55	0.98	0.999564
4311	3R_DroMel_CAF1	11,435,686 – 11,435,806	- - - - - - - - -	7033	11,435,686 – 11,435,806	-	5	120	98.83	-1.92	0.96	0.991931
4312	3R_DroMel_CAF1	11,435,956 – 11,436,062	- - - - - - - - -	7034	11,435,956 – 11,436,062	+	5	120	83.21	-2.48	0.76	0.974050
4313	3R_DroMel_CAF1	11,436,935 – 11,437,055	- - - - - - - - -	7035	11,436,935 – 11,437,055	-	5	120	96.30	-1.89	0.92	0.993776
4314	3R_DroMel_CAF1	11,437,127 – 11,437,306	- - - - - - - - -	7036	11,437,127 – 11,437,226	+	5	120	81.62	-1.50	0.78	0.578663
				7037	11,437,146 – 11,437,266	+	5	120	93.67	-1.83	0.86	0.974213
				7038	11,437,146 – 11,437,266	-	5	120	93.67	-2.19	0.88	0.997228
				7039	11,437,186 – 11,437,306	+	5	120	90.07	-1.96	0.77	0.870154
4315	3R_DroMel_CAF1	11,437,828 – 11,437,978	- - - - - - - - -	7040	11,437,828 – 11,437,947	+	5	120	90.27	-2.04	0.89	0.994156
4315	3R_DroMel_CAF1	11,437,828 – 11,437,978	- - - - - - - - -	7041	11,437,867 – 11,437,978	+	4	111	96.40	-1.54	0.93	0.591971
4316	3R_DroMel_CAF1	11,438,985 – 11,439,105	- - - - - - - - -	7042	11,438,985 – 11,439,105	+	5	120	96.92	-1.47	0.88	0.793814
4317	3R_DroMel_CAF1	11,440,271 – 11,440,423	- - - - - - - - -	7043	11,440,271 – 11,440,391	+	5	120	87.45	-1.67	0.94	0.934947
				7044	11,440,271 – 11,440,391	-	5	120	87.45	-2.19	0.81	0.961148
				7045	11,440,311 – 11,440,423	-	5	120	93.06	-2.15	0.86	0.995352
4318	3R_DroMel_CAF1	11,440,463 – 11,440,711	- - - - - - - - -	7046	11,440,463 – 11,440,577	+	5	120	96.05	-2.29	0.87	0.996077
				7047	11,440,463 – 11,440,577	-	5	120	96.05	-1.62	0.95	0.986260
				7048	11,440,503 – 11,440,617	-	5	120	96.22	-1.17	0.90	0.546562
				7049	11,440,537 – 11,440,653	+	5	120	95.54	-1.73	0.92	0.989083
				7050	11,440,537 – 11,440,653	-	5	120	95.54	-1.26	0.86	0.531900
				7051	11,440,577 – 11,440,673	-	4	104	94.00	-3.75	0.88	0.979959
				7052	11,440,617 – 11,440,711	+	3	102	81.94	-2.09	0.80	0.914754
				7053	11,440,617 – 11,440,711	-	3	102	81.94	-2.62	0.76	0.974480
4319	3R_DroMel_CAF1	11,440,750 – 11,440,860	- - - - - - - - -	7054	11,440,750 – 11,440,860	-	5	120	94.04	-1.85	0.83	0.937291
4320	3R_DroMel_CAF1	11,441,347 – 11,441,484	- - - - - - - - -	7055	11,441,347 – 11,441,444	+	5	120	79.14	-2.75	0.83	0.996563
				7056	11,441,347 – 11,441,444	-	5	120	79.14	-1.42	0.71	0.528536
				7057	11,441,364 – 11,441,484	+	5	120	87.96	-1.95	0.87	0.967395
				7058	11,441,364 – 11,441,484	-	5	120	87.96	-1.64	0.96	0.951175
4321	3R_DroMel_CAF1	11,442,098 – 11,442,218	- - - - - - - - -	7059	11,442,098 – 11,442,218	+	5	120	96.50	-1.25	0.92	0.734966
4322	3R_DroMel_CAF1	11,442,532 – 11,442,895	- - - - - - - - -	7060	11,442,532 – 11,442,624	-	5	120	80.06	-3.09	0.64	0.996887
				7061	11,442,549 – 11,442,662	-	5	120	80.18	-1.93	0.75	0.898741
				7062	11,442,662 – 11,442,782	+	5	120	97.50	-1.35	0.88	0.617826
				7063	11,442,742 – 11,442,855	-	5	120	82.86	-1.96	0.83	0.905922
				7064	11,442,782 – 11,442,895	+	5	120	80.99	-1.73	0.68	0.688620
4323	3R_DroMel_CAF1	11,443,217 – 11,443,313	- - - - - - - - -	7065	11,443,217 – 11,443,313	+	5	120	87.67	-1.59	0.86	0.803360
4323	3R_DroMel_CAF1	11,443,217 – 11,443,313	- - - - - - - - -	7066	11,443,217 – 11,443,313	-	5	120	87.67	-1.94	0.92	0.984998
4324	3R_DroMel_CAF1	11,443,344 – 11,443,529	- - - - - - - - -	7067	11,443,344 – 11,443,455	-	5	120	85.54	-1.82	0.69	0.621815
4324	3R_DroMel_CAF1	11,443,344 – 11,443,529	- - - - - - - - -	7068	11,443,415 – 11,443,529	-	5	120	94.67	-2.43	0.77	0.879784
4325	3R_DroMel_CAF1	11,443,684 – 11,443,801	- - - - - - - - -	7069	11,443,684 – 11,443,801	-	5	120	88.65	-2.29	0.84	0.988983
4326	3R_DroMel_CAF1	11,443,917 – 11,444,034	- - - - - - - - -	7070	11,443,917 – 11,444,034	+	5	120	89.33	-2.12	0.70	0.631043
4326	3R_DroMel_CAF1	11,443,917 – 11,444,034	- - - - - - - - -	7071	11,443,917 – 11,444,034	-	5	120	89.33	-3.28	0.77	0.994349
4327	3R_DroMel_CAF1	11,452,263 – 11,452,383	- - - - - - - - -	7072	11,452,263 – 11,452,383	-	4	120	90.28	-2.04	0.88	0.943910
4328	3R_DroMel_CAF1	11,453,024 – 11,453,137	- - - - - - - - -	7073	11,453,024 – 11,453,137	-	5	120	94.83	-1.22	0.94	0.810931
4329	3R_DroMel_CAF1	11,453,177 – 11,453,311	- - - - - - - - -	7074	11,453,177 – 11,453,276	+	5	120	82.41	-2.18	0.60	0.785628
				7075	11,453,202 – 11,453,311	+	5	120	86.91	-3.28	0.69	0.967285
				7076	11,453,202 – 11,453,311	-	5	120	86.91	-2.51	0.63	0.659647
4330	3R_DroMel_CAF1	11,453,421 – 11,453,537	- - - - - - - - -	7077	11,453,421 – 11,453,537	+	5	120	90.47	-2.01	0.81	0.946876
4331	3R_DroMel_CAF1	11,453,612 – 11,453,726	- - - - - - - - -	7078	11,453,612 – 11,453,726	+	4	120	84.03	-1.43	0.79	0.515233
4332	3R_DroMel_CAF1	11,454,798 – 11,454,997	- - - - - - - - -	7079	11,454,798 – 11,454,917	+	5	120	92.00	-1.65	0.80	0.766379
				7080	11,454,838 – 11,454,957	-	5	120	94.64	-1.10	0.93	0.578924
				7081	11,454,877 – 11,454,997	-	5	120	88.00	-1.49	0.78	0.559189
4333	3R_DroMel_CAF1	11,456,565 – 11,456,790	- - - - - - - - -	7082	11,456,565 – 11,456,685	+	5	120	97.83	-1.32	0.96	0.842455
				7083	11,456,645 – 11,456,765	+	5	120	94.00	-2.80	0.85	0.998980
				7084	11,456,685 – 11,456,790	+	5	120	83.06	-1.67	0.71	0.605051
4334	3R_DroMel_CAF1	11,456,835 – 11,456,952	- - - - - - - - -	7085	11,456,835 – 11,456,952	-	5	120	73.23	-1.65	0.52	0.547250
4335	3R_DroMel_CAF1	11,457,157 – 11,457,273	- - - - - - - - -	7086	11,457,157 – 11,457,273	-	5	120	96.33	-1.67	0.89	0.951156
4336	3R_DroMel_CAF1	11,457,306 – 11,457,399	- - - - - - - - -	7087	11,457,306 – 11,457,399	-	4	107	87.42	-1.58	0.81	0.681628
4337	3R_DroMel_CAF1	11,457,692 – 11,457,810	- - - - - - - - -	7088	11,457,692 – 11,457,810	+	5	120	92.76	-1.32	0.81	0.500000
4338	3R_DroMel_CAF1	11,458,604 – 11,458,918	- - - "knownCDS=Parent=FBtr0083149;Name=CG5302-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5302-RA" - - - - -	7089	11,458,604 – 11,458,718	-	5	120	93.56	-1.46	0.90	0.926351
				7090	11,458,678 – 11,458,798	-	5	120	90.29	-1.31	0.86	0.616888
				7091	11,458,718 – 11,458,838	+	5	120	90.79	-2.46	0.78	0.970899
				7092	11,458,798 – 11,458,918	+	5	120	98.17	-2.43	0.88	0.992572
4339	3R_DroMel_CAF1	11,459,418 – 11,459,518	- - - - - - - - -	7093	11,459,418 – 11,459,518	+	5	120	86.30	-1.67	0.72	0.570289
4340	3R_DroMel_CAF1	11,459,818 – 11,459,919	- - - - - - - - -	7094	11,459,818 – 11,459,919	+	5	101	92.67	-1.35	0.82	0.580156
4341	3R_DroMel_CAF1	11,460,209 – 11,460,363	- - - - - - - - -	7095	11,460,209 – 11,460,323	+	5	120	95.37	-2.36	0.84	0.990924
				7096	11,460,209 – 11,460,323	-	5	120	95.37	-2.53	0.83	0.991873
				7097	11,460,246 – 11,460,363	+	5	120	97.31	-1.75	0.91	0.971158
				7098	11,460,246 – 11,460,363	-	5	120	97.31	-1.83	0.91	0.982937
4342	3R_DroMel_CAF1	11,460,478 – 11,460,626	- - - - - - - - -	7099	11,460,478 – 11,460,586	+	5	120	91.71	-1.37	0.86	0.755123
				7100	11,460,478 – 11,460,586	-	5	120	91.71	-1.88	0.95	0.997401
				7101	11,460,518 – 11,460,626	-	5	120	90.48	-1.73	0.86	0.946762
4343	3R_DroMel_CAF1	11,462,655 – 11,462,785	- - - - - - - - -	7102	11,462,655 – 11,462,745	-	3	109	77.06	-1.42	0.81	0.883903
4343	3R_DroMel_CAF1	11,462,655 – 11,462,785	- - - - - - - - -	7103	11,462,684 – 11,462,785	-	3	109	88.07	-3.08	0.65	0.714397
4344	3R_DroMel_CAF1	11,464,101 – 11,464,221	- - - - - - - - -	7104	11,464,101 – 11,464,221	+	4	120	85.56	-2.21	0.73	0.904018
4345	3R_DroMel_CAF1	11,464,261 – 11,464,361	- - - - - - - - -	7105	11,464,261 – 11,464,361	+	3	102	83.89	-2.58	0.58	0.551855
4346	3R_DroMel_CAF1	11,464,441 – 11,464,533	- - - - - - - - -	7106	11,464,441 – 11,464,533	+	4	120	82.34	-2.47	0.52	0.584232
4347	3R_DroMel_CAF1	11,464,742 – 11,464,938	- - - "knownCDS=Parent=FBtr0083149;Name=CG5302-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5302-RA" - - - - -	7107	11,464,742 – 11,464,859	+	4	120	92.33	-1.61	0.86	0.716904
				7108	11,464,742 – 11,464,859	-	4	120	92.33	-2.35	0.87	0.965470
				7109	11,464,779 – 11,464,899	+	4	120	97.50	-2.86	1.00	0.983835
				7110	11,464,779 – 11,464,899	-	4	120	97.50	-2.94	0.97	0.979237
				7111	11,464,819 – 11,464,938	+	3	120	82.22	-2.10	0.83	0.930880
				7112	11,464,819 – 11,464,938	-	3	120	82.22	-1.42	0.78	0.500000
4348	3R_DroMel_CAF1	11,465,028 – 11,465,148	- - - - - - - - -	7113	11,465,028 – 11,465,148	+	4	120	89.86	-1.43	0.78	0.522530
4349	3R_DroMel_CAF1	11,465,187 – 11,465,305	- - - - - - - - -	7114	11,465,187 – 11,465,305	-	4	120	96.50	-1.78	0.93	0.773479
4350	3R_DroMel_CAF1	11,466,683 – 11,466,779	- - - - - - - - -	7115	11,466,683 – 11,466,779	+	5	107	86.16	-2.10	0.65	0.638699
4351	3R_DroMel_CAF1	11,467,225 – 11,467,363	- - - - - - - - -	7116	11,467,225 – 11,467,333	+	5	113	83.55	-2.21	0.63	0.790662
4351	3R_DroMel_CAF1	11,467,225 – 11,467,363	- - - - - - - - -	7117	11,467,264 – 11,467,363	-	5	103	82.50	-2.36	0.53	0.738124
4352	3R_DroMel_CAF1	11,467,645 – 11,467,748	- - - - - - - - -	7118	11,467,645 – 11,467,748	+	3	103	99.35	-1.89	1.00	0.875159
4353	3R_DroMel_CAF1	11,468,875 – 11,468,966	- - - - - - - - -	7119	11,468,875 – 11,468,966	+	6	93	97.09	-0.72	0.96	0.508519
4354	3R_DroMel_CAF1	11,469,362 – 11,469,461	- - - - - - - - -	7120	11,469,362 – 11,469,461	-	6	109	82.59	-1.76	0.67	0.578803
4355	3R_DroMel_CAF1	11,474,401 – 11,474,531	- - - - - - - - -	7121	11,474,401 – 11,474,491	+	6	107	80.18	-1.82	0.56	0.524944
4355	3R_DroMel_CAF1	11,474,401 – 11,474,531	- - - - - - - - -	7122	11,474,440 – 11,474,531	-	6	108	75.65	-1.67	0.64	0.900954
4356	3R_DroMel_CAF1	11,475,918 – 11,476,018	- - - - - - - - -	7123	11,475,918 – 11,476,018	+	5	101	90.11	-1.55	0.77	0.616246
4357	3R_DroMel_CAF1	11,476,399 – 11,476,491	- - - - - - - - -	7124	11,476,399 – 11,476,491	+	6	98	88.49	-2.70	0.81	0.843757
4358	3R_DroMel_CAF1	11,482,760 – 11,482,890	- - - - - - - - -	7125	11,482,760 – 11,482,862	+	3	102	81.61	-1.69	0.86	0.880487
				7126	11,482,760 – 11,482,862	-	3	102	81.61	-1.51	0.83	0.724127
				7127	11,482,790 – 11,482,890	-	4	112	72.07	-1.43	0.66	0.669658
4359	3R_DroMel_CAF1	11,486,235 – 11,486,338	- - - - - - - - -	7128	11,486,235 – 11,486,338	-	5	104	94.97	-1.49	0.82	0.635263
4360	3R_DroMel_CAF1	11,487,138 – 11,487,232	- - - - - - - - -	7129	11,487,138 – 11,487,232	+	6	104	73.96	-2.32	0.44	0.955740
4360	3R_DroMel_CAF1	11,487,138 – 11,487,232	- - - - - - - - -	7130	11,487,138 – 11,487,232	-	6	104	73.96	-2.56	0.43	0.983553
4361	3R_DroMel_CAF1	11,492,814 – 11,492,921	- - - - - - - - -	7131	11,492,814 – 11,492,921	-	6	108	80.93	-1.74	0.68	0.749931
4362	3R_DroMel_CAF1	11,496,733 – 11,496,828	- - - - - - - - -	7132	11,496,733 – 11,496,828	-	4	108	84.18	-1.68	0.73	0.687620
4363	3R_DroMel_CAF1	11,497,848 – 11,497,965	- - - "knownCDS=Parent=FBtr0083161;Name=pxb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33207-RA" - - - - -	7133	11,497,848 – 11,497,965	-	5	120	70.32	-1.42	0.59	0.547294
4364	3R_DroMel_CAF1	11,504,084 – 11,504,175	- - - - - - - - -	7134	11,504,084 – 11,504,175	-	5	91	96.48	-1.77	0.93	0.990748
4365	3R_DroMel_CAF1	11,508,141 – 11,508,265	- - - - - - - - -	7135	11,508,141 – 11,508,233	+	6	95	77.75	-1.49	0.71	0.858059
				7136	11,508,141 – 11,508,233	-	6	95	77.75	-1.32	0.63	0.557173
				7137	11,508,170 – 11,508,265	+	4	102	87.76	-1.65	0.66	0.520270
4366	3R_DroMel_CAF1	11,516,773 – 11,516,877	- - - - - - - - -	7138	11,516,773 – 11,516,877	+	4	111	79.87	-2.79	0.50	0.864598
4366	3R_DroMel_CAF1	11,516,773 – 11,516,877	- - - - - - - - -	7139	11,516,773 – 11,516,877	-	4	111	79.87	-3.73	0.52	0.993789
4367	3R_DroMel_CAF1	11,526,515 – 11,526,612	- - - - - - - - -	7140	11,526,515 – 11,526,612	+	6	112	75.06	-2.45	0.25	0.500000
4368	3R_DroMel_CAF1	11,526,716 – 11,526,819	- - - - - - - - -	7141	11,526,716 – 11,526,819	-	4	112	83.60	-1.34	0.91	0.624021
4369	3R_DroMel_CAF1	11,527,114 – 11,527,217	- - - - - - - - -	7142	11,527,114 – 11,527,217	-	5	107	83.03	-1.73	0.62	0.500000
4370	3R_DroMel_CAF1	11,527,667 – 11,527,809	- - - - - - - - -	7143	11,527,667 – 11,527,772	+	3	115	75.00	-1.81	0.55	0.536521
4370	3R_DroMel_CAF1	11,527,667 – 11,527,809	- - - - - - - - -	7144	11,527,704 – 11,527,809	+	3	115	84.02	-1.75	0.77	0.613096
4371	3R_DroMel_CAF1	11,530,453 – 11,530,547	- - - "knownCDS=Parent=FBtr0083165;Name=CG5404-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5404-RA" - - - - -	7145	11,530,453 – 11,530,547	+	6	107	81.83	-1.90	0.80	0.831227
4372	3R_DroMel_CAF1	11,537,823 – 11,537,923	- - - - - - - - -	7146	11,537,823 – 11,537,923	+	4	100	82.33	-2.23	0.55	0.599163
4373	3R_DroMel_CAF1	11,546,850 – 11,546,942	- - - - - - - - -	7147	11,546,850 – 11,546,942	+	6	94	92.30	-2.02	0.81	0.522168
4374	3R_DroMel_CAF1	11,547,037 – 11,547,128	- - - - - - - - -	7148	11,547,037 – 11,547,128	+	6	113	84.85	-1.78	0.78	0.566262
4375	3R_DroMel_CAF1	11,549,465 – 11,549,573	- - - - - - - - -	7149	11,549,465 – 11,549,573	+	5	114	78.52	-1.82	0.50	0.505432
4376	3R_DroMel_CAF1	11,551,503 – 11,551,596	- - - - - - - - -	7150	11,551,503 – 11,551,596	+	6	103	77.77	-2.82	0.36	0.864385
4377	3R_DroMel_CAF1	11,559,920 – 11,560,011	- - "RNAmicro=f:11559920_t:11560010_strand:+_p:0.756216" - - - - - -	7151	11,559,920 – 11,560,011	+	6	91	92.73	-3.11	0.93	0.999844
4377	3R_DroMel_CAF1	11,559,920 – 11,560,011		7152	11,559,920 – 11,560,011	-	6	91	92.73	-3.54	0.89	0.999596
4378	3R_DroMel_CAF1	11,566,600 – 11,566,711	- - - - - - - - -	7153	11,566,600 – 11,566,711	-	6	112	81.55	-1.91	0.59	0.562578
4379	3R_DroMel_CAF1	11,570,542 – 11,570,662	- - - "knownCDS=Parent=FBtr0083167;Name=CG4520-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4520-RA" - - - - -	7154	11,570,542 – 11,570,662	+	6	120	90.83	-2.00	0.90	0.973392
4379	3R_DroMel_CAF1	11,570,542 – 11,570,662		7155	11,570,542 – 11,570,662	-	6	120	90.83	-3.01	0.86	0.992709
4380	3R_DroMel_CAF1	11,574,244 – 11,574,337	- - - - - - - - -	7156	11,574,244 – 11,574,337	+	6	98	91.41	-1.75	0.83	0.507337
4381	3R_DroMel_CAF1	11,575,023 – 11,575,123	- - - - - - - - -	7157	11,575,023 – 11,575,123	+	5	100	91.80	-1.91	0.91	0.995234
4381	3R_DroMel_CAF1	11,575,023 – 11,575,123	- - - - - - - - -	7158	11,575,023 – 11,575,123	-	5	100	91.80	-1.85	0.86	0.974757
4382	3R_DroMel_CAF1	11,578,065 – 11,578,190	- - - - - - - - -	7159	11,578,065 – 11,578,162	+	5	100	85.16	-3.08	0.87	0.999129
				7160	11,578,065 – 11,578,162	-	5	100	85.16	-2.90	0.72	0.980810
				7161	11,578,097 – 11,578,190	+	6	102	80.12	-2.11	0.56	0.731018
4383	3R_DroMel_CAF1	11,585,611 – 11,585,719	- - - - - - - - -	7162	11,585,611 – 11,585,719	+	6	118	88.92	-1.97	0.83	0.678221
4384	3R_DroMel_CAF1	11,593,341 – 11,593,450	- - - - - - - - -	7163	11,593,341 – 11,593,450	+	5	109	93.85	-2.58	0.81	0.990644
4384	3R_DroMel_CAF1	11,593,341 – 11,593,450	- - - - - - - - -	7164	11,593,341 – 11,593,450	-	5	109	93.85	-2.66	0.76	0.919294
4385	3R_DroMel_CAF1	11,597,602 – 11,597,710	- - - - - - - - -	7165	11,597,602 – 11,597,710	+	5	109	95.49	-2.12	0.87	0.994114
4386	3R_DroMel_CAF1	11,598,632 – 11,598,744	- - - - - - - - -	7166	11,598,632 – 11,598,744	-	5	112	88.74	-1.48	0.82	0.663643
4387	3R_DroMel_CAF1	11,601,438 – 11,601,530	- - - - - - - - -	7167	11,601,438 – 11,601,530	+	5	95	78.75	-1.88	0.55	0.654069
4387	3R_DroMel_CAF1	11,601,438 – 11,601,530	- - - - - - - - -	7168	11,601,438 – 11,601,530	-	5	95	78.75	-2.27	0.63	0.963334
4388	3R_DroMel_CAF1	11,601,803 – 11,601,957	- - - "knownCDS=Parent=FBtr0083170;Name=CG4525-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4525-RA" - - - - -	7169	11,601,803 – 11,601,917	+	6	117	75.19	-2.07	0.49	0.879388
4388	3R_DroMel_CAF1	11,601,803 – 11,601,957		7170	11,601,843 – 11,601,957	+	6	117	74.90	-1.90	0.47	0.692551
4389	3R_DroMel_CAF1	11,607,745 – 11,607,877	- - - - - - - - -	7171	11,607,745 – 11,607,852	+	5	107	95.70	-1.93	0.86	0.971941
				7172	11,607,745 – 11,607,852	-	5	107	95.70	-1.75	0.80	0.716730
				7173	11,607,777 – 11,607,877	+	6	114	77.06	-1.23	0.69	0.724904
4390	3R_DroMel_CAF1	11,608,982 – 11,609,075	- - - - - - - - -	7174	11,608,982 – 11,609,075	+	4	97	86.59	-2.20	0.76	0.907602
4391	3R_DroMel_CAF1	11,609,689 – 11,609,785	- - - - - - - - -	7175	11,609,689 – 11,609,785	+	4	101	87.48	-1.63	0.68	0.553237
4392	3R_DroMel_CAF1	11,614,577 – 11,614,697	- - - "knownCDS=Parent=FBtr0083173;Name=CG9589-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9589-RA" - - - - -	7176	11,614,577 – 11,614,697	-	6	120	85.39	-2.30	0.74	0.566290
4393	3R_DroMel_CAF1	11,616,982 – 11,617,130	- - - - - - - - -	7177	11,616,982 – 11,617,090	+	5	120	83.54	-3.08	0.77	0.995670
4393	3R_DroMel_CAF1	11,616,982 – 11,617,130	- - - - - - - - -	7178	11,617,022 – 11,617,130	+	5	120	78.00	-1.98	0.66	0.920692
4394	3R_DroMel_CAF1	11,620,733 – 11,620,850	- - - "knownCDS=Parent=FBtr0083175, FBtr0083177;Name=CG4699-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4699-RA, FlyBase+Annotation+IDs:CG4699-RC" - - - - -	7179	11,620,733 – 11,620,850	-	4	120	73.86	-2.01	0.69	0.985013
4395	3R_DroMel_CAF1	11,623,838 – 11,623,949	- - - "knownCDS=Parent=FBtr0083175, FBtr0083177;Name=CG4699-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4699-RA, FlyBase+Annotation+IDs:CG4699-RC" - - - - -	7180	11,623,838 – 11,623,949	+	6	120	77.13	-1.40	0.60	0.529293
4396	3R_DroMel_CAF1	11,628,075 – 11,628,190	- - - - - - - - -	7181	11,628,075 – 11,628,190	+	5	115	89.74	-1.61	0.82	0.794053
4397	3R_DroMel_CAF1	11,630,295 – 11,630,403	- - - - - - - - -	7182	11,630,295 – 11,630,403	-	5	114	88.13	-1.66	0.75	0.613309
4398	3R_DroMel_CAF1	11,630,502 – 11,630,601	- - - - - - - - -	7183	11,630,502 – 11,630,601	-	5	100	92.78	-3.01	0.77	0.985537
4399	3R_DroMel_CAF1	11,630,853 – 11,630,953	- - - - - - - - -	7184	11,630,853 – 11,630,953	+	5	108	81.11	-1.61	0.71	0.623939
4400	3R_DroMel_CAF1	11,633,966 – 11,634,078	- - - - - - - - -	7185	11,633,966 – 11,634,078	-	6	120	78.09	-2.04	0.46	0.509898
4401	3R_DroMel_CAF1	11,634,615 – 11,634,839	- - - - - - - - -	7186	11,634,615 – 11,634,731	+	6	120	87.54	-2.90	0.76	0.691700
4401	3R_DroMel_CAF1	11,634,615 – 11,634,839	- - - - - - - - -	7187	11,634,731 – 11,634,839	-	5	118	77.06	-1.42	0.09	0.560716
4402	3R_DroMel_CAF1	11,637,714 – 11,637,819	- - - - - - - - -	7188	11,637,714 – 11,637,819	+	5	107	92.76	-1.98	0.85	0.981313
4402	3R_DroMel_CAF1	11,637,714 – 11,637,819	- - - - - - - - -	7189	11,637,714 – 11,637,819	-	5	107	92.76	-1.75	0.77	0.713692
4403	3R_DroMel_CAF1	11,640,188 – 11,640,290	- - - - - - - - -	7190	11,640,188 – 11,640,290	+	5	109	91.56	-1.61	0.76	0.564827
4404	3R_DroMel_CAF1	11,641,659 – 11,641,768	- - - - - - - - -	7191	11,641,659 – 11,641,768	+	4	110	94.06	-1.54	0.86	0.569011
4405	3R_DroMel_CAF1	11,642,205 – 11,642,303	- - - - - - - - -	7192	11,642,205 – 11,642,303	+	4	120	59.17	-2.25	0.42	0.936131
4406	3R_DroMel_CAF1	11,643,814 – 11,643,995	- - - - - - - - -	7193	11,643,814 – 11,643,915	+	5	101	95.25	-3.09	0.87	0.999669
				7194	11,643,814 – 11,643,915	-	5	101	95.25	-2.20	0.85	0.991769
				7195	11,643,887 – 11,643,995	-	6	120	90.60	-3.78	0.75	0.859190
4407	3R_DroMel_CAF1	11,644,957 – 11,645,077	- - - "knownCDS=Parent=FBtr0083179;Name=alpha-Man-IIb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4606-RA" - - - - -	7196	11,644,957 – 11,645,077	+	5	120	91.58	-1.27	0.85	0.563424
4408	3R_DroMel_CAF1	11,645,437 – 11,645,637	- - - "knownCDS=Parent=FBtr0083179;Name=alpha-Man-IIb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4606-RA" - - - - -	7197	11,645,437 – 11,645,557	-	5	120	95.00	-1.40	0.95	0.945010
4408	3R_DroMel_CAF1	11,645,437 – 11,645,637		7198	11,645,517 – 11,645,637	-	5	120	97.50	-1.28	0.91	0.650827
4409	3R_DroMel_CAF1	11,645,837 – 11,645,997	- - - "knownCDS=Parent=FBtr0083179;Name=alpha-Man-IIb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4606-RA" - - - - -	7199	11,645,837 – 11,645,957	-	5	120	95.42	-1.93	0.91	0.995611
4409	3R_DroMel_CAF1	11,645,837 – 11,645,997		7200	11,645,877 – 11,645,997	-	5	120	94.00	-1.39	0.93	0.927150
4410	3R_DroMel_CAF1	11,646,277 – 11,646,397	- - - "knownCDS=Parent=FBtr0083179;Name=alpha-Man-IIb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4606-RA" - - - - -	7201	11,646,277 – 11,646,397	+	5	120	92.83	-1.39	0.92	0.901423
4411	3R_DroMel_CAF1	11,647,072 – 11,647,192	- - - "knownCDS=Parent=FBtr0083179;Name=alpha-Man-IIb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4606-RA" - - - - -	7202	11,647,072 – 11,647,192	-	5	120	92.33	-1.15	0.88	0.500000
4412	3R_DroMel_CAF1	11,647,512 – 11,647,632	- - - "knownCDS=Parent=FBtr0083179;Name=alpha-Man-IIb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4606-RA" - - - - -	7203	11,647,512 – 11,647,632	+	5	120	94.50	-1.95	0.93	0.997819
4412	3R_DroMel_CAF1	11,647,512 – 11,647,632		7204	11,647,512 – 11,647,632	-	5	120	94.50	-1.43	0.93	0.940045
4413	3R_DroMel_CAF1	11,647,672 – 11,647,792	- - - "knownCDS=Parent=FBtr0083179;Name=alpha-Man-IIb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4606-RA" - - - - -	7205	11,647,672 – 11,647,792	+	5	120	93.33	-1.67	0.88	0.962406
4413	3R_DroMel_CAF1	11,647,672 – 11,647,792		7206	11,647,672 – 11,647,792	-	5	120	93.33	-1.78	0.87	0.974037
4414	3R_DroMel_CAF1	11,648,139 – 11,648,539	- - - "knownCDS=Parent=FBtr0083179;Name=alpha-Man-IIb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4606-RA" - - - - -	7207	11,648,139 – 11,648,259	+	5	120	95.33	-1.17	0.90	0.581083
				7208	11,648,179 – 11,648,299	-	5	120	95.67	-2.38	0.86	0.996590
				7209	11,648,219 – 11,648,339	-	5	120	96.33	-1.33	0.88	0.657079
				7210	11,648,339 – 11,648,459	-	5	120	94.75	-1.40	0.94	0.942389
				7211	11,648,379 – 11,648,499	-	5	120	95.00	-2.25	0.98	0.999865
				7212	11,648,419 – 11,648,539	-	5	120	93.67	-1.14	0.93	0.655049
4415	3R_DroMel_CAF1	11,650,199 – 11,650,319	- - - "knownCDS=Parent=FBtr0083193;Name=rec-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31293-RA" - - - - -	7213	11,650,199 – 11,650,319	+	5	120	96.08	-1.94	0.86	0.968524
4415	3R_DroMel_CAF1	11,650,199 – 11,650,319		7214	11,650,199 – 11,650,319	-	5	120	96.08	-2.77	0.95	0.999939
4416	3R_DroMel_CAF1	11,650,479 – 11,650,599	- - - "knownCDS=Parent=FBtr0083193;Name=rec-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31293-RA" - - - - -	7215	11,650,479 – 11,650,599	-	5	120	92.92	-1.42	0.82	0.627920
4417	3R_DroMel_CAF1	11,651,261 – 11,651,381	- - - - - - - - -	7216	11,651,261 – 11,651,381	+	5	120	94.97	-1.97	0.90	0.995439
4418	3R_DroMel_CAF1	11,651,760 – 11,651,960	- - - "knownCDS=Parent=FBtr0083180;Name=CG4576-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4576-RA" - - - - -	7217	11,651,760 – 11,651,880	+	5	120	95.31	-1.42	0.88	0.833160
				7218	11,651,760 – 11,651,880	-	5	120	95.31	-1.15	0.90	0.561935
				7219	11,651,800 – 11,651,920	+	5	120	93.63	-1.63	0.88	0.959059
				7220	11,651,800 – 11,651,920	-	5	120	93.63	-1.47	0.81	0.606810
				7221	11,651,840 – 11,651,960	-	5	120	96.83	-1.46	0.92	0.910527
4419	3R_DroMel_CAF1	11,652,554 – 11,652,674	- - - - - - - - -	7222	11,652,554 – 11,652,674	+	5	120	90.44	-1.83	0.74	0.647261
4420	3R_DroMel_CAF1	11,653,631 – 11,653,737	- - - - - - - - -	7223	11,653,631 – 11,653,737	-	5	120	90.22	-1.36	0.80	0.500000
4421	3R_DroMel_CAF1	11,653,777 – 11,653,897	- - - - - - - - -	7224	11,653,777 – 11,653,897	-	4	120	92.03	-1.85	0.85	0.841593
4422	3R_DroMel_CAF1	11,658,606 – 11,658,803	- - - "knownCDS=Parent=FBtr0083192;Name=CG14876-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14876-RA" - - - - -	7225	11,658,606 – 11,658,723	+	6	120	79.37	-2.40	0.48	0.754939
				7226	11,658,606 – 11,658,723	-	6	120	79.37	-2.46	0.49	0.825046
				7227	11,658,646 – 11,658,763	+	6	120	80.11	-2.16	0.50	0.556158
				7228	11,658,646 – 11,658,763	-	6	120	80.11	-2.31	0.51	0.714927
				7229	11,658,683 – 11,658,803	-	6	120	81.33	-1.96	0.58	0.568761
4423	3R_DroMel_CAF1	11,660,799 – 11,660,908	- - - - - - - - -	7230	11,660,799 – 11,660,908	+	5	109	77.08	-2.26	0.70	0.986924
4424	3R_DroMel_CAF1	11,662,622 – 11,662,718	- - - - - - - - -	7231	11,662,622 – 11,662,718	-	6	109	77.40	-2.01	0.47	0.600473
4425	3R_DroMel_CAF1	11,671,061 – 11,671,171	- - - "knownCDS=Parent=FBtr0083189;Name=CG31150-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31150-RA" - - - - -	7232	11,671,061 – 11,671,171	+	6	112	85.47	-2.49	0.78	0.768411
4426	3R_DroMel_CAF1	11,679,765 – 11,679,857	- - - - - - - - -	7233	11,679,765 – 11,679,857	+	6	103	80.91	-1.47	0.71	0.672178
4427	3R_DroMel_CAF1	11,682,687 – 11,682,784	- - - - - - - - -	7234	11,682,687 – 11,682,784	+	5	97	91.74	-1.30	0.85	0.633962
4427	3R_DroMel_CAF1	11,682,687 – 11,682,784	- - - - - - - - -	7235	11,682,687 – 11,682,784	-	5	97	91.74	-2.47	0.94	0.999874
4428	3R_DroMel_CAF1	11,684,648 – 11,684,750	- - - "knownCDS=Parent=FBtr0083187;Name=CG31183-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31183-RA" - - - - -	7236	11,684,648 – 11,684,750	+	6	108	83.90	-2.36	0.80	0.848139
4429	3R_DroMel_CAF1	11,689,799 – 11,689,889	- - - - - - - - -	7237	11,689,799 – 11,689,889	-	4	95	76.37	-2.22	0.64	0.978040
4430	3R_DroMel_CAF1	11,692,823 – 11,692,916	- - - - - - - - -	7238	11,692,823 – 11,692,916	+	6	105	85.09	-2.04	0.76	0.588397
4431	3R_DroMel_CAF1	11,700,410 – 11,700,500	- - - - - - - - -	7239	11,700,410 – 11,700,500	+	6	107	66.71	-2.97	0.25	0.981357
4431	3R_DroMel_CAF1	11,700,410 – 11,700,500	- - - - - - - - -	7240	11,700,410 – 11,700,500	-	6	107	66.71	-1.73	0.37	0.613906
4432	3R_DroMel_CAF1	11,701,478 – 11,701,573	- - - "knownCDS=texon3624;Parent=CG_RGUI_GID_mRNA_40008408, CG_DGIL_SNO_28365434" - - - - -	7241	11,701,478 – 11,701,573	+	6	101	68.39	-2.22	0.41	0.969843
4432	3R_DroMel_CAF1	11,701,478 – 11,701,573		7242	11,701,478 – 11,701,573	-	6	101	68.39	-2.23	0.30	0.876982
4433	3R_DroMel_CAF1	11,703,927 – 11,704,115	- - - - - - - - -	7243	11,703,927 – 11,704,047	+	5	120	71.98	-2.32	0.32	0.987409
				7244	11,703,927 – 11,704,047	-	5	120	71.98	-2.85	0.45	0.999418
				7245	11,703,967 – 11,704,080	-	4	113	79.20	-2.64	0.69	0.995184
				7246	11,704,007 – 11,704,115	-	3	108	72.38	-2.42	0.72	0.999919
4434	3R_DroMel_CAF1	11,707,126 – 11,707,228	- - - - - - - - -	7247	11,707,126 – 11,707,228	+	6	113	84.54	-2.87	0.68	0.666132
4434	3R_DroMel_CAF1	11,707,126 – 11,707,228	- - - - - - - - -	7248	11,707,126 – 11,707,228	-	6	113	84.54	-3.18	0.71	0.811058
4435	3R_DroMel_CAF1	11,707,879 – 11,707,969	- - - - - - - - -	7249	11,707,879 – 11,707,969	-	6	109	77.66	-1.88	0.56	0.796859
4436	3R_DroMel_CAF1	11,708,235 – 11,708,383	- - - - - - - - -	7250	11,708,235 – 11,708,350	+	6	120	76.72	-1.98	0.60	0.925725
				7251	11,708,235 – 11,708,350	-	6	120	76.72	-2.16	0.47	0.807804
				7252	11,708,275 – 11,708,383	+	6	110	79.15	-1.34	0.66	0.607911
4437	3R_DroMel_CAF1	11,712,648 – 11,712,745	- - - - - - - - -	7253	11,712,648 – 11,712,745	-	6	98	79.66	-2.24	0.56	0.831576
4438	3R_DroMel_CAF1	11,713,520 – 11,713,650	- - - - - - - - -	7254	11,713,520 – 11,713,610	+	5	90	88.62	-1.74	0.76	0.701137
				7255	11,713,520 – 11,713,610	-	5	90	88.62	-2.47	0.65	0.551767
				7256	11,713,546 – 11,713,650	+	6	110	80.88	-2.54	0.61	0.881762
				7257	11,713,546 – 11,713,650	-	6	110	80.88	-3.43	0.49	0.940410
4439	3R_DroMel_CAF1	11,721,138 – 11,721,249	- - - - - - - - -	7258	11,721,138 – 11,721,249	-	6	116	82.18	-1.34	0.70	0.500000
4440	3R_DroMel_CAF1	11,727,303 – 11,727,394	- - - - - - - - -	7259	11,727,303 – 11,727,394	-	6	101	73.00	-2.15	0.39	0.864183
4441	3R_DroMel_CAF1	11,734,368 – 11,734,466	- - - "knownCDS=Parent=FBtr0083200;Name=CG3303-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3303-RA" - - - - -	7260	11,734,368 – 11,734,466	+	6	110	79.33	-2.16	0.57	0.837638
4442	3R_DroMel_CAF1	11,738,790 – 11,738,917	- - - "knownCDS=texon11410;Parent=CG_RGUI_GID_mRNA_40008412, CG_DGIL_SNO_28365441" - - - - -	7261	11,738,790 – 11,738,880	+	6	99	84.20	-2.11	0.82	0.820826
				7262	11,738,790 – 11,738,880	-	6	99	84.20	-2.62	0.74	0.782769
				7263	11,738,812 – 11,738,917	+	6	108	87.60	-1.79	0.82	0.563931
4443	3R_DroMel_CAF1	11,745,110 – 11,745,212	- - - - - - - - -	7264	11,745,110 – 11,745,212	+	6	114	81.47	-1.79	0.59	0.508555
4444	3R_DroMel_CAF1	11,751,816 – 11,751,948	- - - - - - - - -	7265	11,751,816 – 11,751,919	-	5	104	88.30	-2.47	0.73	0.920052
4444	3R_DroMel_CAF1	11,751,816 – 11,751,948	- - - - - - - - -	7266	11,751,855 – 11,751,948	-	6	93	76.34	-1.52	0.77	0.939888
4445	3R_DroMel_CAF1	11,752,049 – 11,752,149	- - - - - - - - -	7267	11,752,049 – 11,752,149	+	6	104	72.40	-1.29	0.60	0.603698
4445	3R_DroMel_CAF1	11,752,049 – 11,752,149	- - - - - - - - -	7268	11,752,049 – 11,752,149	-	6	104	72.40	-1.39	0.69	0.925541
4446	3R_DroMel_CAF1	11,752,431 – 11,752,552	- - - - - - - - -	7269	11,752,431 – 11,752,528	+	5	99	83.92	-1.60	0.69	0.511400
4446	3R_DroMel_CAF1	11,752,431 – 11,752,552	- - - - - - - - -	7270	11,752,452 – 11,752,552	-	5	102	83.91	-3.85	0.90	0.999729
4447	3R_DroMel_CAF1	11,759,093 – 11,759,232	- - "RNAmicro=f:11759093_t:11759201_strand:+_p:0.642885" "knownCDS=Parent=FBtr0083242;Name=CG5478-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5478-RA" - - - - -	7271	11,759,093 – 11,759,198	+	6	109	77.20	-2.68	0.68	0.986948
				7272	11,759,093 – 11,759,198	-	6	109	77.20	-2.09	0.56	0.907498
				7273	11,759,130 – 11,759,232	+	6	108	76.75	-1.60	0.58	0.678554
4448	3R_DroMel_CAF1	11,761,296 – 11,761,394	- - - - - - - - -	7274	11,761,296 – 11,761,394	-	5	101	94.83	-2.03	0.84	0.970855
4449	3R_DroMel_CAF1	11,771,375 – 11,771,471	- - - - - - - - -	7275	11,771,375 – 11,771,471	+	6	108	72.34	-2.16	0.34	0.775703
4450	3R_DroMel_CAF1	11,778,527 – 11,778,637	- - - - - - - - -	7276	11,778,527 – 11,778,637	+	5	110	90.48	-3.26	0.66	0.708842
4451	3R_DroMel_CAF1	11,780,651 – 11,780,766	- - - "knownCDS=Parent=FBtr0083204, FBtr0083205, FBtr0083206, FBtr0083208, FBtr0083209, FBtr0083210, FBtr0083211;Name=Sap47-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8884-RA, FlyBase+Annotation+IDs:CG8884-RB, FlyBase+Annotation+IDs:CG8884-RC, FlyBase+Annotation+IDs:CG8884-RE, FlyBase+Annotation+IDs:CG8884-RF, FlyBase+Annotation+IDs:CG8884-RG, FlyBase+Annotation+IDs:CG8884-RH" - - - - -	7277	11,780,651 – 11,780,766	-	6	120	78.19	-2.13	0.62	0.929780
4452	3R_DroMel_CAF1	11,781,848 – 11,781,961	- - - "knownCDS=Parent=FBtr0083204, FBtr0083206, FBtr0083208, FBtr0083210, FBtr0083211;Name=Sap47-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8884-RA, FlyBase+Annotation+IDs:CG8884-RC, FlyBase+Annotation+IDs:CG8884-RE, FlyBase+Annotation+IDs:CG8884-RG, FlyBase+Annotation+IDs:CG8884-RH" - - - - -	7278	11,781,848 – 11,781,961	+	6	114	74.70	-1.87	0.52	0.837174
4452	3R_DroMel_CAF1	11,781,848 – 11,781,961		7279	11,781,848 – 11,781,961	-	6	114	74.70	-1.91	0.54	0.888978
4453	3R_DroMel_CAF1	11,785,238 – 11,785,351	- - - - - - - - -	7280	11,785,238 – 11,785,351	+	6	120	89.37	-1.27	0.90	0.584093
4454	3R_DroMel_CAF1	11,794,174 – 11,794,272	- - - - - - - - -	7281	11,794,174 – 11,794,272	+	6	109	72.12	-2.19	0.42	0.939793
4455	3R_DroMel_CAF1	11,797,285 – 11,797,387	- - "RNAmicro=f:11797285_t:11797386_strand:+_p:0.999738" "knownCDS=Parent=FBtr0083238;Name=mor-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18740-RA" - - - - -	7282	11,797,285 – 11,797,387	+	6	102	82.03	-2.14	0.81	0.883867
4456	3R_DroMel_CAF1	11,800,654 – 11,800,769	- - - - - - - - -	7283	11,800,654 – 11,800,769	-	4	119	81.27	-1.97	0.69	0.849351
4457	3R_DroMel_CAF1	11,802,224 – 11,802,333	- - - - - - - - -	7284	11,802,224 – 11,802,333	-	5	109	92.66	-1.57	0.78	0.628452
4458	3R_DroMel_CAF1	11,807,719 – 11,807,839	- - - "knownCDS=Parent=FBtr0083214;Name=Hel89B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4261-RA" - - - - -	7285	11,807,719 – 11,807,839	+	6	120	80.22	-1.44	0.67	0.648676
4459	3R_DroMel_CAF1	11,809,865 – 11,809,983	- - - - - - - - -	7286	11,809,865 – 11,809,983	-	5	120	90.68	-1.95	0.73	0.689935
4460	3R_DroMel_CAF1	11,810,150 – 11,810,264	- - - - - - - - -	7287	11,810,150 – 11,810,264	+	5	115	71.58	-1.87	0.30	0.806384
4461	3R_DroMel_CAF1	11,810,430 – 11,810,655	- - - - - - - - -	7288	11,810,430 – 11,810,538	-	5	120	89.12	-1.98	0.69	0.558399
				7289	11,810,498 – 11,810,615	+	5	120	92.55	-1.40	0.80	0.518759
				7290	11,810,538 – 11,810,655	+	5	120	92.52	-1.64	0.76	0.549291
				7291	11,810,538 – 11,810,655	-	5	120	92.52	-1.24	0.85	0.539677
4462	3R_DroMel_CAF1	11,810,917 – 11,811,016	- - - - - - - - -	7292	11,810,917 – 11,811,016	+	5	120	73.55	-2.05	0.36	0.924053
4463	3R_DroMel_CAF1	11,811,339 – 11,811,569	- - - - - - - - -	7293	11,811,339 – 11,811,434	+	5	120	82.39	-2.02	0.61	0.701228
				7294	11,811,395 – 11,811,489	+	5	120	86.85	-2.88	0.73	0.976459
				7295	11,811,395 – 11,811,489	-	5	120	86.85	-2.13	0.77	0.907953
				7296	11,811,449 – 11,811,569	+	5	120	96.50	-1.21	0.96	0.777808
4464	3R_DroMel_CAF1	11,811,682 – 11,811,786	- - - - - - - - -	7297	11,811,682 – 11,811,786	-	5	104	99.23	-2.95	1.00	0.999803
4465	3R_DroMel_CAF1	11,813,442 – 11,813,679	- - - - - - - - -	7298	11,813,442 – 11,813,562	+	5	120	95.75	-1.87	0.92	0.994589
				7299	11,813,442 – 11,813,562	-	5	120	95.75	-2.05	0.87	0.988656
				7300	11,813,522 – 11,813,639	-	5	117	96.58	-1.82	0.99	0.997951
				7301	11,813,562 – 11,813,679	+	5	117	91.82	-1.57	0.90	0.954369
				7302	11,813,562 – 11,813,679	-	5	117	91.82	-1.50	0.99	0.983398
4466	3R_DroMel_CAF1	11,814,362 – 11,814,482	- - - - - - - - -	7303	11,814,362 – 11,814,482	+	5	120	91.16	-2.65	0.84	0.998004
4467	3R_DroMel_CAF1	11,814,840 – 11,815,093	- - - - - - - - -	7304	11,814,840 – 11,814,959	+	5	120	94.13	-1.73	0.83	0.887900
				7305	11,814,879 – 11,814,999	+	5	120	97.67	-1.42	0.92	0.833850
				7306	11,814,959 – 11,815,053	+	5	120	85.42	-1.77	0.81	0.788425
				7307	11,814,999 – 11,815,093	+	5	120	83.92	-2.19	0.70	0.874745
				7308	11,814,999 – 11,815,093	-	5	120	83.92	-1.93	0.82	0.880790
4468	3R_DroMel_CAF1	11,816,262 – 11,816,382	- - - - - - - - -	7309	11,816,262 – 11,816,382	+	3	120	97.78	-2.17	0.96	0.900951
4469	3R_DroMel_CAF1	11,817,612 – 11,817,731	- - - - - - - - -	7310	11,817,612 – 11,817,731	+	3	120	97.78	-1.70	0.96	0.692159
4470	3R_DroMel_CAF1	11,818,011 – 11,818,131	- - - - - - - - -	7311	11,818,011 – 11,818,131	-	3	120	96.11	-2.09	0.90	0.760187
4471	3R_DroMel_CAF1	11,819,124 – 11,819,244	- - - - - - - - -	7312	11,819,124 – 11,819,244	-	3	120	96.67	-1.40	0.99	0.557104
4472	3R_DroMel_CAF1	11,819,569 – 11,819,689	- - - - - - - - -	7313	11,819,569 – 11,819,689	+	3	120	93.06	-1.95	0.84	0.535157
4472	3R_DroMel_CAF1	11,819,569 – 11,819,689	- - - - - - - - -	7314	11,819,569 – 11,819,689	-	3	120	93.06	-2.70	0.89	0.939337
4473	3R_DroMel_CAF1	11,819,729 – 11,819,824	- - - - - - - - -	7315	11,819,729 – 11,819,824	-	3	95	96.48	-2.81	0.87	0.896406
4474	3R_DroMel_CAF1	11,834,444 – 11,834,537	- - - - - - - - -	7316	11,834,444 – 11,834,537	+	6	114	82.44	-2.54	0.65	0.786854
4475	3R_DroMel_CAF1	11,835,415 – 11,835,535	- - - - - - - - -	7317	11,835,415 – 11,835,535	-	6	120	89.17	-2.79	0.76	0.547756
4476	3R_DroMel_CAF1	11,835,678 – 11,835,783	- - - - - - - - -	7318	11,835,678 – 11,835,783	+	5	109	94.47	-2.29	0.85	0.994199
4477	3R_DroMel_CAF1	11,836,299 – 11,836,405	- - - - - - - - -	7319	11,836,299 – 11,836,405	+	6	120	82.83	-2.53	0.64	0.737651
4477	3R_DroMel_CAF1	11,836,299 – 11,836,405	- - - - - - - - -	7320	11,836,299 – 11,836,405	-	6	120	82.83	-1.94	0.64	0.560124
4478	3R_DroMel_CAF1	11,836,853 – 11,836,954	- - - - - - - - -	7321	11,836,853 – 11,836,954	+	5	108	85.36	-1.88	0.75	0.774565
4479	3R_DroMel_CAF1	11,839,415 – 11,839,542	- - - - - - - - -	7322	11,839,415 – 11,839,509	+	6	119	72.33	-2.30	0.53	0.988022
4479	3R_DroMel_CAF1	11,839,415 – 11,839,542	- - - - - - - - -	7323	11,839,447 – 11,839,542	+	6	119	76.94	-1.66	0.58	0.736507
4480	3R_DroMel_CAF1	11,839,655 – 11,839,745	- - - - - - - - -	7324	11,839,655 – 11,839,745	+	5	97	93.32	-1.57	0.92	0.973044
4480	3R_DroMel_CAF1	11,839,655 – 11,839,745	- - - - - - - - -	7325	11,839,655 – 11,839,745	-	5	97	93.32	-1.42	0.91	0.921181
4481	3R_DroMel_CAF1	11,841,145 – 11,841,427	- - - - - - - - -	7326	11,841,145 – 11,841,256	+	4	117	87.04	-1.44	0.78	0.560531
				7327	11,841,145 – 11,841,256	-	4	117	87.04	-1.81	0.75	0.763560
				7328	11,841,179 – 11,841,294	+	6	120	76.68	-1.60	0.66	0.874437
				7329	11,841,294 – 11,841,387	-	3	93	94.87	-1.48	1.04	0.827310
				7330	11,841,326 – 11,841,427	-	6	120	72.76	-1.62	0.67	0.955421
4482	3R_DroMel_CAF1	11,852,842 – 11,852,938	- - - - - - - - -	7331	11,852,842 – 11,852,938	+	5	96	95.62	-1.58	0.94	0.979064
4482	3R_DroMel_CAF1	11,852,842 – 11,852,938	- - - - - - - - -	7332	11,852,842 – 11,852,938	-	5	96	95.62	-2.10	0.88	0.995358
4483	3R_DroMel_CAF1	11,865,944 – 11,866,050	- - - "knownCDS=Parent=FBtr0083221;Name=pnr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3978-RA" - - - - -	7333	11,865,944 – 11,866,050	+	6	113	75.74	-1.37	0.61	0.613043
4483	3R_DroMel_CAF1	11,865,944 – 11,866,050		7334	11,865,944 – 11,866,050	-	6	113	75.74	-1.51	0.64	0.834361
4484	3R_DroMel_CAF1	11,866,176 – 11,866,328	- - - - - - - - -	7335	11,866,176 – 11,866,293	+	4	120	80.25	-2.42	0.57	0.891581
4484	3R_DroMel_CAF1	11,866,176 – 11,866,328	- - - - - - - - -	7336	11,866,215 – 11,866,328	-	4	115	81.90	-2.11	0.55	0.520131
4485	3R_DroMel_CAF1	11,869,769 – 11,869,889	- - - "knownCDS=Parent=FBtr0083222;Name=CG10264-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10264-RA" - - - - -	7337	11,869,769 – 11,869,889	+	6	120	79.33	-1.61	0.59	0.560381
4486	3R_DroMel_CAF1	11,879,662 – 11,879,760	- - - "knownCDS=Parent=FBtr0083224;Name=msps-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5000-RA" - - - - -	7338	11,879,662 – 11,879,760	+	6	101	76.70	-2.19	0.56	0.943651
4487	3R_DroMel_CAF1	11,886,474 – 11,886,591	- - - "knownCDS=Parent=FBtr0083235;Name=CG10185-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10185-RA" - - - - -	7339	11,886,474 – 11,886,591	-	6	117	79.20	-1.28	0.64	0.500000
4488	3R_DroMel_CAF1	11,889,514 – 11,889,610	- - - - - - - - -	7340	11,889,514 – 11,889,610	-	6	110	78.11	-1.38	0.65	0.677412
4489	3R_DroMel_CAF1	11,890,446 – 11,890,544	- - - - - - - - -	7341	11,890,446 – 11,890,544	+	6	104	87.87	-3.22	0.71	0.500000
4490	3R_DroMel_CAF1	11,894,987 – 11,895,107	- - - - - - - - -	7342	11,894,987 – 11,895,107	+	3	120	98.33	-1.47	0.98	0.594380
4491	3R_DroMel_CAF1	11,898,535 – 11,898,724	- - - "knownCDS=Parent=FBtr0083232, FBtr0083233, FBtr0083230, FBtr0083229, FBtr0083231;Name=Mhcl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31045-RC, FlyBase+Annotation+IDs:CG31045-RD, FlyBase+Annotation+IDs:CG31045-RE, FlyBase+Annotation+IDs:CG31045-RA, FlyBase+Annotation+IDs:CG31045-RB" - - - - -	7343	11,898,535 – 11,898,655	+	6	120	93.11	-2.04	0.90	0.985051
				7344	11,898,535 – 11,898,655	-	6	120	93.11	-1.28	0.89	0.624183
				7345	11,898,615 – 11,898,724	-	6	115	74.82	-1.20	0.77	0.904881
4492	3R_DroMel_CAF1	11,899,949 – 11,900,042	- - - - - - - - -	7346	11,899,949 – 11,900,042	-	6	103	81.80	-2.75	0.56	0.802765
4493	3R_DroMel_CAF1	11,904,826 – 11,904,936	- - - "knownCDS=Parent=FBtr0083234;Name=CG32855-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32855-RA" - - - - -	7347	11,904,826 – 11,904,936	-	6	120	79.25	-2.04	0.57	0.796959
4494	3R_DroMel_CAF1	11,908,118 – 11,908,210	- - - - - - - - -	7348	11,908,118 – 11,908,210	-	5	96	85.34	-2.09	0.65	0.665479
4495	3R_DroMel_CAF1	11,918,730 – 11,918,921	- - - "knownCDS=texon11415;Parent=CG_RGUI_GID_mRNA_40008431, CG_DGIL_SNO_28365477, CG_BATZ_CON_47009824" - - - - -	7349	11,918,730 – 11,918,830	+	6	103	82.64	-1.80	0.67	0.589800
4495	3R_DroMel_CAF1	11,918,730 – 11,918,921		7350	11,918,830 – 11,918,921	+	6	91	85.13	-2.59	0.78	0.819260
4496	3R_DroMel_CAF1	11,920,314 – 11,920,404	- - - - - - - - -	7351	11,920,314 – 11,920,404	-	6	92	86.73	-2.77	0.73	0.532524
4497	3R_DroMel_CAF1	11,921,950 – 11,922,042	- - - "knownCDS=Parent=FBtr0083230, FBtr0083229, FBtr0083231;Name=Mhcl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31045-RE, FlyBase+Annotation+IDs:CG31045-RA, FlyBase+Annotation+IDs:CG31045-RB" - - - - -	7352	11,921,950 – 11,922,042	+	6	92	82.45	-1.99	0.63	0.598019
4498	3R_DroMel_CAF1	11,924,284 – 11,924,379	- - - - - - - - -	7353	11,924,284 – 11,924,379	-	5	95	93.05	-1.43	0.82	0.644395
4499	3R_DroMel_CAF1	11,927,271 – 11,927,416	- - - "knownCDS=Parent=FBtr0083226;Name=Akt1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4006-RB" - - - - -	7354	11,927,271 – 11,927,376	+	6	105	78.98	-2.77	0.60	0.970284
4499	3R_DroMel_CAF1	11,927,271 – 11,927,416		7355	11,927,311 – 11,927,416	+	6	105	80.32	-1.61	0.66	0.700659
4500	3R_DroMel_CAF1	11,927,502 – 11,927,609	- - - "knownCDS=Parent=FBtr0083227;Name=Akt1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4006-RA" - - - - -	7356	11,927,502 – 11,927,609	+	6	120	76.51	-1.23	0.72	0.807889
4501	3R_DroMel_CAF1	11,929,829 – 11,929,924	- - - - - - - - -	7357	11,929,829 – 11,929,924	+	6	97	85.57	-2.11	0.76	0.585856
4501	3R_DroMel_CAF1	11,929,829 – 11,929,924	- - - - - - - - -	7358	11,929,829 – 11,929,924	-	6	97	85.57	-2.42	0.80	0.791186
4502	3R_DroMel_CAF1	11,939,454 – 11,939,554	- - - - - - - - -	7359	11,939,454 – 11,939,554	-	5	110	92.09	-1.56	0.81	0.742471
4503	3R_DroMel_CAF1	11,946,388 – 11,946,479	- - - - - - - - -	7360	11,946,388 – 11,946,479	-	5	96	89.60	-2.01	0.75	0.830667
4504	3R_DroMel_CAF1	11,947,008 – 11,947,102	- - - - - - - - -	7361	11,947,008 – 11,947,102	-	6	100	81.10	-1.50	0.67	0.609449
4505	3R_DroMel_CAF1	11,948,569 – 11,948,661	- - - - - - - - -	7362	11,948,569 – 11,948,661	-	5	93	92.15	-1.32	0.91	0.815732
4506	3R_DroMel_CAF1	11,956,708 – 11,956,801	- - - - - - - - -	7363	11,956,708 – 11,956,801	-	6	107	82.18	-1.51	0.73	0.617070
4507	3R_DroMel_CAF1	11,957,591 – 11,957,683	- - - - - - - - -	7364	11,957,591 – 11,957,683	+	5	92	87.21	-1.70	0.72	0.578576
4508	3R_DroMel_CAF1	11,959,012 – 11,959,102	- - - - - - - - -	7365	11,959,012 – 11,959,102	+	6	107	74.11	-1.92	0.44	0.668098
4508	3R_DroMel_CAF1	11,959,012 – 11,959,102	- - - - - - - - -	7366	11,959,012 – 11,959,102	-	6	107	74.11	-1.70	0.51	0.650771
4509	3R_DroMel_CAF1	11,961,462 – 11,961,553	- - - - - - - - -	7367	11,961,462 – 11,961,553	+	4	91	86.16	-1.98	0.68	0.752935
4510	3R_DroMel_CAF1	11,964,579 – 11,964,669	- - - - - - - - -	7368	11,964,579 – 11,964,669	-	4	113	72.16	-3.77	0.55	0.999948
4511	3R_DroMel_CAF1	11,969,837 – 11,970,014	- - - - - - - - -	7369	11,969,837 – 11,969,955	+	6	118	73.23	-1.32	0.82	0.965995
				7370	11,969,837 – 11,969,955	-	6	118	73.23	-0.88	0.74	0.765413
				7371	11,969,917 – 11,970,014	-	5	97	93.20	-1.62	0.77	0.570234
4512	3R_DroMel_CAF1	11,973,864 – 11,973,984	- - - "knownCDS=Parent=FBtr0083251;Name=CG5916-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5916-RA" - - - - -	7372	11,973,864 – 11,973,984	+	6	120	81.83	-1.69	0.63	0.551855
4513	3R_DroMel_CAF1	11,985,919 – 11,986,023	- - - - - - - - -	7373	11,985,919 – 11,986,023	+	6	108	76.02	-1.66	0.53	0.554433
4514	3R_DroMel_CAF1	11,986,288 – 11,986,382	- - - - - - - - -	7374	11,986,288 – 11,986,382	-	5	94	90.11	-2.75	0.80	0.994098
4515	3R_DroMel_CAF1	11,988,529 – 11,988,625	- - - - - - - - -	7375	11,988,529 – 11,988,625	+	6	102	80.64	-1.29	0.67	0.519331
4516	3R_DroMel_CAF1	11,995,656 – 11,995,762	- - - "knownCDS=Parent=FBtr0083252;Name=CG6006-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6006-RA" - - - - -	7376	11,995,656 – 11,995,762	+	6	106	81.82	-1.19	0.77	0.500000
4517	3R_DroMel_CAF1	11,995,791 – 11,995,886	- - - "knownCDS=Parent=FBtr0083252;Name=CG6006-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6006-RA" - - - - -	7377	11,995,791 – 11,995,886	-	6	100	78.20	-1.28	0.68	0.687794
4518	3R_DroMel_CAF1	12,000,775 – 12,000,869	- - - - - - - - -	7378	12,000,775 – 12,000,869	+	6	105	88.28	-1.93	0.81	0.586464
4519	3R_DroMel_CAF1	12,002,873 – 12,002,966	- - - - - - - - -	7379	12,002,873 – 12,002,966	+	4	95	92.43	-2.21	0.82	0.890891
4520	3R_DroMel_CAF1	12,004,055 – 12,004,161	- - - - - - - - -	7380	12,004,055 – 12,004,161	+	6	113	80.67	-2.71	0.64	0.931761
4521	3R_DroMel_CAF1	12,012,422 – 12,012,525	- - - "knownCDS=Parent=FBtr0083279;Name=Bin1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6046-RA" - - - - -	7381	12,012,422 – 12,012,525	-	6	106	77.34	-1.65	0.56	0.618412
4522	3R_DroMel_CAF1	12,013,715 – 12,013,819	- - - - - - - - -	7382	12,013,715 – 12,013,819	-	5	104	97.88	-2.87	0.97	0.999894
4523	3R_DroMel_CAF1	12,014,491 – 12,014,589	- - - - - - - - -	7383	12,014,491 – 12,014,589	+	6	101	82.19	-1.63	0.64	0.511043
4524	3R_DroMel_CAF1	12,015,957 – 12,016,076	- - - - - - - - -	7384	12,015,957 – 12,016,076	-	3	120	75.53	-1.38	0.93	0.996725
4525	3R_DroMel_CAF1	12,016,154 – 12,016,252	- - - - - - - - -	7385	12,016,154 – 12,016,252	+	5	100	93.96	-2.22	0.74	0.689376
4525	3R_DroMel_CAF1	12,016,154 – 12,016,252	- - - - - - - - -	7386	12,016,154 – 12,016,252	-	5	100	93.96	-2.34	0.83	0.991868
4526	3R_DroMel_CAF1	12,019,148 – 12,019,266	- - - - - - - - -	7387	12,019,148 – 12,019,266	+	5	120	91.56	-2.17	0.86	0.995245
4526	3R_DroMel_CAF1	12,019,148 – 12,019,266	- - - - - - - - -	7388	12,019,148 – 12,019,266	-	5	120	91.56	-1.55	0.77	0.591890
4527	3R_DroMel_CAF1	12,019,382 – 12,019,474	- - - - - - - - -	7389	12,019,382 – 12,019,474	+	6	120	81.25	-1.71	0.77	0.793478
4527	3R_DroMel_CAF1	12,019,382 – 12,019,474	- - - - - - - - -	7390	12,019,382 – 12,019,474	-	6	120	81.25	-1.12	0.76	0.500000
4528	3R_DroMel_CAF1	12,019,834 – 12,019,945	- - - - - - - - -	7391	12,019,834 – 12,019,945	-	4	111	91.14	-1.92	0.76	0.720109
4529	3R_DroMel_CAF1	12,022,583 – 12,022,680	- - - - - - - - -	7392	12,022,583 – 12,022,680	+	6	98	83.90	-1.96	0.67	0.500000
4530	3R_DroMel_CAF1	12,023,103 – 12,023,228	- - - - - - - - -	7393	12,023,103 – 12,023,207	+	6	107	86.75	-2.50	0.78	0.712148
				7394	12,023,133 – 12,023,228	+	5	95	95.78	-2.12	0.79	0.871771
				7395	12,023,133 – 12,023,228	-	5	95	95.78	-1.37	0.84	0.542398
4531	3R_DroMel_CAF1	12,023,927 – 12,024,102	- - - "knownCDS=Parent=FBtr0083278;Name=CG6126-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6126-RA" - - - - -	7396	12,023,927 – 12,024,022	+	6	95	83.65	-2.76	0.69	0.758762
4531	3R_DroMel_CAF1	12,023,927 – 12,024,102		7397	12,023,982 – 12,024,102	-	6	120	84.61	-1.68	0.77	0.521258
4532	3R_DroMel_CAF1	12,025,497 – 12,025,649	- - - "knownCDS=Parent=FBtr0083278;Name=CG6126-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6126-RA" - - - - -	7398	12,025,497 – 12,025,617	-	6	120	79.94	-1.66	0.59	0.556433
				7399	12,025,537 – 12,025,649	+	6	112	75.77	-1.76	0.62	0.910464
				7400	12,025,537 – 12,025,649	-	6	112	75.77	-1.94	0.75	0.977162
4533	3R_DroMel_CAF1	12,028,383 – 12,028,484	- - - - - - - - -	7401	12,028,383 – 12,028,484	+	5	101	85.10	-2.10	0.64	0.651738
4534	3R_DroMel_CAF1	12,031,187 – 12,031,305	- - - - - - - - -	7402	12,031,187 – 12,031,305	-	3	119	85.35	-2.29	0.67	0.678734
4535	3R_DroMel_CAF1	12,032,804 – 12,032,903	- - - - - - - - -	7403	12,032,804 – 12,032,903	-	5	108	79.96	-2.10	0.51	0.738255
4536	3R_DroMel_CAF1	12,034,117 – 12,034,235	- - - - - - - - -	7404	12,034,117 – 12,034,235	+	5	118	95.25	-1.56	0.90	0.953300
4536	3R_DroMel_CAF1	12,034,117 – 12,034,235	- - - - - - - - -	7405	12,034,117 – 12,034,235	-	5	118	95.25	-1.17	0.88	0.505882
4537	3R_DroMel_CAF1	12,037,912 – 12,038,098	- - - - - - - - -	7406	12,037,912 – 12,038,006	+	5	94	97.45	-1.21	0.95	0.696239
				7407	12,037,912 – 12,038,006	-	5	94	97.45	-2.59	0.99	0.999897
				7408	12,038,006 – 12,038,098	+	5	92	96.63	-1.36	0.88	0.683902
4538	3R_DroMel_CAF1	12,041,286 – 12,041,516	- - - - - - - - -	7409	12,041,286 – 12,041,401	-	5	120	88.29	-2.92	0.79	0.994445
				7410	12,041,326 – 12,041,438	-	5	117	92.46	-2.13	0.72	0.587107
				7411	12,041,401 – 12,041,516	+	5	116	87.83	-2.85	0.81	0.996348
4539	3R_DroMel_CAF1	12,042,289 – 12,042,379	- - - - - - - - -	7412	12,042,289 – 12,042,379	-	5	91	85.71	-2.35	0.64	0.743970
4540	3R_DroMel_CAF1	12,042,533 – 12,042,699	- - - - - - - - -	7413	12,042,533 – 12,042,634	-	4	103	95.42	-1.97	0.86	0.781150
				7414	12,042,568 – 12,042,671	+	4	105	95.99	-1.99	0.87	0.777693
				7415	12,042,604 – 12,042,699	+	5	97	85.70	-3.69	0.67	0.986419
				7416	12,042,604 – 12,042,699	-	5	97	85.70	-2.06	0.68	0.706409
4541	3R_DroMel_CAF1	12,042,802 – 12,042,901	- - - - - - - - -	7417	12,042,802 – 12,042,901	+	3	111	84.11	-0.67	0.93	0.578416
4542	3R_DroMel_CAF1	12,043,126 – 12,043,222	- - - - - - - - -	7418	12,043,126 – 12,043,222	+	4	96	94.79	-1.44	0.89	0.511953
4543	3R_DroMel_CAF1	12,044,077 – 12,044,181	- - - - - - - - -	7419	12,044,077 – 12,044,181	-	6	114	81.22	-1.74	0.68	0.715927
4544	3R_DroMel_CAF1	12,044,691 – 12,044,784	- - - - - - - - -	7420	12,044,691 – 12,044,784	-	6	120	76.60	-2.37	0.68	0.983731
4545	3R_DroMel_CAF1	12,045,193 – 12,045,297	- - - - - - - - -	7421	12,045,193 – 12,045,297	+	5	120	75.72	-1.79	0.43	0.542519
4546	3R_DroMel_CAF1	12,048,321 – 12,048,411	- - - - - - - - -	7422	12,048,321 – 12,048,411	+	3	90	98.52	-2.05	0.94	0.817328
4546	3R_DroMel_CAF1	12,048,321 – 12,048,411	- - - - - - - - -	7423	12,048,321 – 12,048,411	-	3	90	98.52	-1.66	0.94	0.610502
4547	3R_DroMel_CAF1	12,049,024 – 12,049,278	- - - - - - - - -	7424	12,049,024 – 12,049,130	-	3	118	86.84	-2.48	0.81	0.873561
				7425	12,049,059 – 12,049,163	-	4	118	88.29	-3.10	0.91	0.997286
				7426	12,049,163 – 12,049,278	+	3	115	91.74	-1.63	0.93	0.656987
				7427	12,049,163 – 12,049,278	-	3	115	91.74	-1.87	0.88	0.638003
4548	3R_DroMel_CAF1	12,050,348 – 12,050,461	- - - - - - - - -	7428	12,050,348 – 12,050,461	+	3	119	86.53	-3.89	0.79	0.971804
4548	3R_DroMel_CAF1	12,050,348 – 12,050,461	- - - - - - - - -	7429	12,050,348 – 12,050,461	-	3	119	86.53	-5.73	0.90	0.913020
4549	3R_DroMel_CAF1	12,050,629 – 12,050,737	- - - - - - - - -	7430	12,050,629 – 12,050,737	-	4	120	79.97	-1.59	0.72	0.613910
4550	3R_DroMel_CAF1	12,051,472 – 12,051,574	- - - - - - - - -	7431	12,051,472 – 12,051,574	+	4	120	75.00	-1.98	0.54	0.724099
4551	3R_DroMel_CAF1	12,051,730 – 12,051,850	- - - - - - - - -	7432	12,051,730 – 12,051,850	-	3	120	99.44	-1.74	1.00	0.811512
4552	3R_DroMel_CAF1	12,052,621 – 12,052,779	- - - - - - - - -	7433	12,052,621 – 12,052,741	-	3	120	98.33	-2.44	0.95	0.934881
4552	3R_DroMel_CAF1	12,052,621 – 12,052,779	- - - - - - - - -	7434	12,052,661 – 12,052,779	-	3	120	96.65	-3.56	0.85	0.908570
4553	3R_DroMel_CAF1	12,057,375 – 12,057,469	- - - - - - - - -	7435	12,057,375 – 12,057,469	-	3	120	71.84	-1.51	0.66	0.924216
4554	3R_DroMel_CAF1	12,058,536 – 12,058,696	- - - - - - - - -	7436	12,058,536 – 12,058,656	-	3	120	96.11	-1.78	0.96	0.770869
4554	3R_DroMel_CAF1	12,058,536 – 12,058,696	- - - - - - - - -	7437	12,058,576 – 12,058,696	-	3	120	97.22	-2.83	0.99	0.987542
4555	3R_DroMel_CAF1	12,059,802 – 12,059,917	- - - - - - - - -	7438	12,059,802 – 12,059,917	-	3	120	93.80	-1.80	0.92	0.689276
4556	3R_DroMel_CAF1	12,060,419 – 12,060,526	- - - - - - - - -	7439	12,060,419 – 12,060,526	+	3	120	81.27	-1.45	0.77	0.548766
4557	3R_DroMel_CAF1	12,062,246 – 12,062,446	- - - - - - - - -	7440	12,062,246 – 12,062,366	-	3	120	88.06	-2.96	0.86	0.963320
				7441	12,062,286 – 12,062,406	+	3	120	88.61	-2.90	0.81	0.920598
				7442	12,062,286 – 12,062,406	-	3	120	88.61	-2.02	0.83	0.668934
				7443	12,062,326 – 12,062,446	+	3	120	88.61	-2.03	0.82	0.662508
4558	3R_DroMel_CAF1	12,063,321 – 12,063,594	- - - - - - - - -	7444	12,063,321 – 12,063,440	+	3	120	98.06	-1.52	0.96	0.566606
				7445	12,063,321 – 12,063,440	-	3	120	98.06	-2.68	0.96	0.968892
				7446	12,063,361 – 12,063,475	-	3	120	94.65	-2.56	0.92	0.944820
				7447	12,063,370 – 12,063,475	-	3	120	89.31	-2.43	0.89	0.931676
				7448	12,063,475 – 12,063,594	-	5	120	91.12	-1.91	0.73	0.630675
4559	3R_DroMel_CAF1	12,064,888 – 12,065,087	- - - - - - - - -	7449	12,064,888 – 12,065,008	+	5	120	93.66	-1.65	0.89	0.972466
				7450	12,064,888 – 12,065,008	-	5	120	93.66	-1.47	0.83	0.713923
				7451	12,064,928 – 12,065,047	+	5	120	91.16	-2.15	0.79	0.943464
				7452	12,064,968 – 12,065,087	+	5	120	92.67	-2.04	0.80	0.941025
4560	3R_DroMel_CAF1	12,065,197 – 12,065,397	- - - - - - - - -	7453	12,065,197 – 12,065,317	+	5	120	96.91	-1.62	0.91	0.948524
				7454	12,065,237 – 12,065,357	-	5	120	97.00	-1.90	0.92	0.992116
				7455	12,065,277 – 12,065,397	+	5	120	96.83	-1.24	0.90	0.614901
4561	3R_DroMel_CAF1	12,065,477 – 12,065,716	- - - - - - - - -	7456	12,065,477 – 12,065,597	-	5	120	97.08	-1.23	0.93	0.689764
				7457	12,065,517 – 12,065,637	+	5	120	95.08	-1.30	0.87	0.642125
				7458	12,065,597 – 12,065,716	-	5	120	95.82	-2.67	0.97	0.999961
4562	3R_DroMel_CAF1	12,066,208 – 12,066,430	- - - - - - - - -	7459	12,066,208 – 12,066,310	+	5	120	85.50	-2.04	0.79	0.904437
4562	3R_DroMel_CAF1	12,066,208 – 12,066,430	- - - - - - - - -	7460	12,066,310 – 12,066,430	+	5	120	98.33	-1.53	0.95	0.932393
4563	3R_DroMel_CAF1	12,066,707 – 12,066,986	- - - - - - - - -	7461	12,066,707 – 12,066,826	+	5	120	96.46	-1.42	0.85	0.619536
				7462	12,066,786 – 12,066,906	+	5	120	99.17	-1.82	0.98	0.986405
				7463	12,066,786 – 12,066,906	-	5	120	99.17	-1.89	0.97	0.989642
				7464	12,066,866 – 12,066,986	-	5	120	96.50	-1.19	0.91	0.598940
4564	3R_DroMel_CAF1	12,067,092 – 12,067,246	- - - - - - - - -	7465	12,067,092 – 12,067,206	-	4	114	97.95	-2.30	0.98	0.937817
4564	3R_DroMel_CAF1	12,067,092 – 12,067,246	- - - - - - - - -	7466	12,067,132 – 12,067,246	-	4	114	97.95	-3.29	0.99	0.980225
4565	3R_DroMel_CAF1	12,068,213 – 12,068,561	- - - - - - - - -	7467	12,068,213 – 12,068,326	+	5	120	89.94	-1.46	0.83	0.708308
				7468	12,068,326 – 12,068,441	-	5	120	92.74	-1.86	0.73	0.500000
				7469	12,068,403 – 12,068,521	+	5	120	92.98	-1.98	0.85	0.984000
				7470	12,068,441 – 12,068,561	+	5	120	96.33	-1.55	0.93	0.960622
				7471	12,068,441 – 12,068,561	-	5	120	96.33	-1.57	0.85	0.774706
4566	3R_DroMel_CAF1	12,069,442 – 12,069,641	- - - - - - - - -	7472	12,069,442 – 12,069,561	-	5	120	87.39	-1.61	0.75	0.594610
				7473	12,069,482 – 12,069,601	+	5	120	88.89	-1.64	0.76	0.645305
				7474	12,069,521 – 12,069,641	+	5	120	95.16	-1.49	0.93	0.963219
4567	3R_DroMel_CAF1	12,069,753 – 12,069,913	- - - - - - - - -	7475	12,069,753 – 12,069,873	-	5	120	93.24	-1.59	0.90	0.966752
				7476	12,069,793 – 12,069,913	+	5	120	97.17	-2.60	0.91	0.999372
				7477	12,069,793 – 12,069,913	-	5	120	97.17	-2.65	0.97	0.999907
4568	3R_DroMel_CAF1	12,070,353 – 12,070,497	- - - - - - - - -	7478	12,070,353 – 12,070,457	+	5	120	88.10	-1.72	0.75	0.662881
				7479	12,070,353 – 12,070,457	-	5	120	88.10	-2.42	0.79	0.977770
				7480	12,070,393 – 12,070,497	+	4	114	92.97	-2.02	0.88	0.926429
				7481	12,070,393 – 12,070,497	-	4	114	92.97	-3.17	0.91	0.994492
4569	3R_DroMel_CAF1	12,070,617 – 12,070,776	- - - - - - - - -	7482	12,070,617 – 12,070,736	+	5	120	95.51	-1.78	0.82	0.825283
4569	3R_DroMel_CAF1	12,070,617 – 12,070,776	- - - - - - - - -	7483	12,070,657 – 12,070,776	+	5	120	87.35	-1.93	0.78	0.859896
4570	3R_DroMel_CAF1	12,071,179 – 12,071,299	- - - - - - - - -	7484	12,071,179 – 12,071,299	+	3	120	99.44	-1.41	1.00	0.593440
4570	3R_DroMel_CAF1	12,071,179 – 12,071,299	- - - - - - - - -	7485	12,071,179 – 12,071,299	-	3	120	99.44	-1.52	1.00	0.677369
4571	3R_DroMel_CAF1	12,071,506 – 12,071,626	- - - - - - - - -	7486	12,071,506 – 12,071,626	+	5	120	96.15	-1.46	0.94	0.945026
4571	3R_DroMel_CAF1	12,071,506 – 12,071,626	- - - - - - - - -	7487	12,071,506 – 12,071,626	-	5	120	96.15	-1.80	0.91	0.987554
4572	3R_DroMel_CAF1	12,071,702 – 12,071,860	- - - - - - - - -	7488	12,071,702 – 12,071,820	-	5	120	99.33	-1.43	0.97	0.813156
4572	3R_DroMel_CAF1	12,071,702 – 12,071,860	- - - - - - - - -	7489	12,071,742 – 12,071,860	-	5	120	98.82	-1.36	0.95	0.758499
4573	3R_DroMel_CAF1	12,072,111 – 12,072,265	- - - - - - - - -	7490	12,072,111 – 12,072,228	-	4	120	92.48	-1.89	0.73	0.500000
4573	3R_DroMel_CAF1	12,072,111 – 12,072,265	- - - - - - - - -	7491	12,072,148 – 12,072,265	-	4	120	90.01	-1.67	0.82	0.737629
4574	3R_DroMel_CAF1	12,072,495 – 12,072,615	- - - - - - - - -	7492	12,072,495 – 12,072,615	+	5	120	92.67	-1.28	0.88	0.722247
4575	3R_DroMel_CAF1	12,073,103 – 12,073,220	- - - - - - - - -	7493	12,073,103 – 12,073,220	+	5	120	95.46	-2.36	0.95	0.999821
4576	3R_DroMel_CAF1	12,073,714 – 12,073,834	- - - - - - - - -	7494	12,073,714 – 12,073,834	+	5	120	96.08	-1.69	0.89	0.962354
4577	3R_DroMel_CAF1	12,074,413 – 12,074,530	- - - - - - - - -	7495	12,074,413 – 12,074,530	-	5	120	90.34	-1.90	0.73	0.634736
4578	3R_DroMel_CAF1	12,075,982 – 12,076,599	- - - - - - - - -	7496	12,075,982 – 12,076,102	+	5	120	96.00	-1.30	0.90	0.746081
				7497	12,076,022 – 12,076,142	+	5	120	97.75	-1.79	0.89	0.946195
				7498	12,076,022 – 12,076,142	-	5	120	97.75	-1.61	0.97	0.976068
				7499	12,076,062 – 12,076,182	-	5	120	94.70	-2.86	0.85	0.998933
				7500	12,076,142 – 12,076,254	+	5	120	89.43	-2.30	0.73	0.859870
				7501	12,076,182 – 12,076,292	-	5	120	92.55	-2.17	0.75	0.782458
				7502	12,076,222 – 12,076,332	+	5	120	92.21	-1.11	0.97	0.669209
				7503	12,076,222 – 12,076,332	-	5	120	92.21	-3.19	0.91	0.999964
				7504	12,076,254 – 12,076,372	+	5	120	98.49	-3.11	1.00	0.999923
				7505	12,076,254 – 12,076,372	-	5	120	98.49	-3.10	0.99	0.999920
				7506	12,076,292 – 12,076,412	+	5	120	99.00	-2.93	0.99	0.999827
				7507	12,076,292 – 12,076,412	-	5	120	99.00	-1.64	0.96	0.949533
				7508	12,076,332 – 12,076,452	+	5	120	98.83	-4.06	0.95	0.999652
				7509	12,076,332 – 12,076,452	-	5	120	98.83	-3.39	0.94	0.999710
				7510	12,076,372 – 12,076,480	+	5	120	89.26	-1.30	0.87	0.578659
				7511	12,076,372 – 12,076,480	-	5	120	89.26	-1.55	0.80	0.684090
				7512	12,076,480 – 12,076,599	+	5	120	94.05	-1.68	0.90	0.980791
				7513	12,076,480 – 12,076,599	-	5	120	94.05	-1.72	0.79	0.699328
4579	3R_DroMel_CAF1	12,076,904 – 12,077,049	- - - - - - - - -	7514	12,076,904 – 12,077,009	+	5	120	81.32	-2.29	0.58	0.868360
4579	3R_DroMel_CAF1	12,076,904 – 12,077,049	- - - - - - - - -	7515	12,076,934 – 12,077,049	+	5	120	89.23	-2.11	0.72	0.768777
4580	3R_DroMel_CAF1	12,077,607 – 12,077,824	- - - - - - - - -	7516	12,077,607 – 12,077,719	+	5	120	95.19	-1.85	0.89	0.989199
				7517	12,077,679 – 12,077,799	+	3	120	100.00	-1.37	0.99	0.536886
				7518	12,077,679 – 12,077,799	-	3	120	100.00	-2.71	1.00	0.980645
				7519	12,077,719 – 12,077,824	-	3	105	100.00	-1.53	1.00	0.689059
4581	3R_DroMel_CAF1	12,077,900 – 12,078,019	- - - - - - - - -	7520	12,077,900 – 12,078,019	+	5	120	94.05	-1.19	0.87	0.545715
4582	3R_DroMel_CAF1	12,078,583 – 12,078,724	- - - - - - - - -	7521	12,078,583 – 12,078,684	+	5	120	86.50	-2.30	0.65	0.664835
				7522	12,078,583 – 12,078,684	-	5	120	86.50	-2.19	0.66	0.688965
				7523	12,078,608 – 12,078,724	+	5	120	92.77	-2.09	0.75	0.733170
				7524	12,078,608 – 12,078,724	-	5	120	92.77	-2.16	0.82	0.978705
4583	3R_DroMel_CAF1	12,079,040 – 12,079,144	- - - - - - - - -	7525	12,079,040 – 12,079,144	-	4	114	86.67	-1.99	0.74	0.829543
4584	3R_DroMel_CAF1	12,079,652 – 12,079,794	- - - - - - - - -	7526	12,079,652 – 12,079,754	+	4	111	92.69	-1.95	0.79	0.711682
				7527	12,079,692 – 12,079,794	+	4	111	93.15	-2.43	0.83	0.925625
				7528	12,079,692 – 12,079,794	-	4	111	93.15	-3.92	0.78	0.835880
4585	3R_DroMel_CAF1	12,080,021 – 12,080,135	- - - - - - - - -	7529	12,080,021 – 12,080,135	+	5	120	95.45	-1.76	0.92	0.989873
4585	3R_DroMel_CAF1	12,080,021 – 12,080,135	- - - - - - - - -	7530	12,080,021 – 12,080,135	-	5	120	95.45	-2.35	0.91	0.999397
4586	3R_DroMel_CAF1	12,080,358 – 12,080,550	- - - - - - - - -	7531	12,080,358 – 12,080,477	-	5	120	97.15	-2.43	0.98	0.999850
				7532	12,080,398 – 12,080,517	-	5	120	97.65	-1.81	0.91	0.976080
				7533	12,080,437 – 12,080,550	-	5	120	95.85	-1.81	0.89	0.982511
4587	3R_DroMel_CAF1	12,080,667 – 12,080,776	- - - - - - - - -	7534	12,080,667 – 12,080,776	+	5	120	94.18	-1.92	0.85	0.973065
4587	3R_DroMel_CAF1	12,080,667 – 12,080,776	- - - - - - - - -	7535	12,080,667 – 12,080,776	-	5	120	94.18	-1.75	0.89	0.981722
4588	3R_DroMel_CAF1	12,082,021 – 12,082,126	- - - - - - - - -	7536	12,082,021 – 12,082,126	-	5	120	90.63	-1.36	0.87	0.722890
4589	3R_DroMel_CAF1	12,082,206 – 12,082,326	- - - - - - - - -	7537	12,082,206 – 12,082,326	+	5	120	98.00	-2.63	0.85	0.988254
4589	3R_DroMel_CAF1	12,082,206 – 12,082,326	- - - - - - - - -	7538	12,082,206 – 12,082,326	-	5	120	98.00	-1.79	0.93	0.978238
4590	3R_DroMel_CAF1	12,082,621 – 12,082,735	- - - "knownCDS=Parent=FBtr0083258;Name=tara-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6889-RB" - - - - -	7539	12,082,621 – 12,082,735	-	4	114	97.81	-1.85	0.97	0.786618
4591	3R_DroMel_CAF1	12,082,775 – 12,082,975	- - - "knownCDS=Parent=FBtr0083258;Name=tara-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6889-RB" - - - - -	7540	12,082,775 – 12,082,895	-	5	120	95.42	-1.54	0.84	0.788971
				7541	12,082,815 – 12,082,935	-	5	120	95.25	-1.93	0.93	0.997667
				7542	12,082,855 – 12,082,975	-	5	120	93.00	-2.05	0.85	0.989305
4592	3R_DroMel_CAF1	12,083,775 – 12,083,935	- - - "knownCDS=Parent=FBtr0083258;Name=tara-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6889-RB" - - - - -	7543	12,083,775 – 12,083,895	-	5	120	97.17	-2.64	0.92	0.999647
4592	3R_DroMel_CAF1	12,083,775 – 12,083,935		7544	12,083,815 – 12,083,935	-	5	120	96.33	-1.97	0.95	0.998299
4593	3R_DroMel_CAF1	12,084,135 – 12,084,255	- - - "knownCDS=Parent=FBtr0083258;Name=tara-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6889-RB" - - - - -	7545	12,084,135 – 12,084,255	-	5	120	94.50	-1.06	0.96	0.601831
4594	3R_DroMel_CAF1	12,084,855 – 12,084,975	- - - "knownCDS=Parent=FBtr0083258;Name=tara-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6889-RB" - - - - -	7546	12,084,855 – 12,084,975	-	5	120	95.50	-1.43	0.89	0.859593
4595	3R_DroMel_CAF1	12,085,015 – 12,085,215	- - - "knownCDS=Parent=FBtr0083258;Name=tara-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6889-RB" - - - - -	7547	12,085,015 – 12,085,135	+	5	120	95.92	-1.59	0.92	0.968631
				7548	12,085,015 – 12,085,135	-	5	120	95.92	-1.16	0.92	0.612711
				7549	12,085,055 – 12,085,175	+	5	120	95.42	-1.73	0.92	0.989389
				7550	12,085,055 – 12,085,175	-	5	120	95.42	-2.69	0.90	0.999697
				7551	12,085,095 – 12,085,215	-	5	120	95.75	-1.28	0.86	0.552191
4596	3R_DroMel_CAF1	12,086,239 – 12,086,358	- - - - - - - - -	7552	12,086,239 – 12,086,342	+	4	119	76.93	-1.55	0.70	0.625432
				7553	12,086,263 – 12,086,358	+	4	120	74.75	-2.80	0.65	0.999633
				7554	12,086,263 – 12,086,358	-	4	120	74.75	-1.88	0.66	0.932677
4597	3R_DroMel_CAF1	12,087,103 – 12,087,249	- - - - - - - - -	7555	12,087,103 – 12,087,209	+	5	120	92.34	-2.04	0.83	0.973705
4597	3R_DroMel_CAF1	12,087,103 – 12,087,249	- - - - - - - - -	7556	12,087,135 – 12,087,249	+	5	120	94.67	-1.91	0.80	0.849618
4598	3R_DroMel_CAF1	12,087,369 – 12,087,488	- - - - - - - - -	7557	12,087,369 – 12,087,488	+	5	120	95.23	-1.08	0.92	0.500000
4599	3R_DroMel_CAF1	12,095,218 – 12,095,338	- - - "knownCDS=Parent=FBtr0083275;Name=CG12785-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12785-RA" - - - - -	7558	12,095,218 – 12,095,338	+	6	120	76.67	-1.59	0.55	0.545931
4599	3R_DroMel_CAF1	12,095,218 – 12,095,338		7559	12,095,218 – 12,095,338	-	6	120	76.67	-1.60	0.55	0.577284
4600	3R_DroMel_CAF1	12,102,559 – 12,102,708	- - - - - - - - -	7560	12,102,559 – 12,102,668	+	5	113	95.75	-1.53	0.89	0.926105
4600	3R_DroMel_CAF1	12,102,559 – 12,102,708	- - - - - - - - -	7561	12,102,596 – 12,102,708	+	3	112	97.62	-1.45	0.96	0.517713
4601	3R_DroMel_CAF1	12,103,155 – 12,103,272	- - - - - - - - -	7562	12,103,155 – 12,103,272	+	5	117	95.38	-1.67	0.80	0.670200
4602	3R_DroMel_CAF1	12,103,838 – 12,103,953	- - - - - - - - -	7563	12,103,838 – 12,103,953	+	5	116	91.68	-1.93	0.72	0.523700
4603	3R_DroMel_CAF1	12,104,271 – 12,104,418	- - - - - - - - -	7564	12,104,271 – 12,104,378	+	5	109	91.08	-1.96	0.81	0.935796
				7565	12,104,271 – 12,104,378	-	5	109	91.08	-1.17	0.89	0.511626
				7566	12,104,302 – 12,104,418	-	5	116	91.90	-2.10	0.74	0.743253
4604	3R_DroMel_CAF1	12,104,497 – 12,104,605	- - - - - - - - -	7567	12,104,497 – 12,104,605	+	5	108	92.68	-2.60	0.84	0.997614
4605	3R_DroMel_CAF1	12,104,991 – 12,105,103	- - - - - - - - -	7568	12,104,991 – 12,105,103	+	5	112	91.96	-1.70	0.83	0.904699
4606	3R_DroMel_CAF1	12,109,515 – 12,109,676	- - - - - - - - -	7569	12,109,515 – 12,109,623	+	3	112	72.73	-1.63	0.71	0.976804
				7570	12,109,545 – 12,109,652	+	3	117	75.37	-2.90	0.70	0.999889
				7571	12,109,583 – 12,109,676	+	3	102	75.09	-2.00	0.65	0.981119
4607	3R_DroMel_CAF1	12,109,903 – 12,110,013	- - - - - - - - -	7572	12,109,903 – 12,110,013	-	6	111	81.22	-1.23	0.75	0.566017
4608	3R_DroMel_CAF1	12,114,841 – 12,114,951	- - - - - - - - -	7573	12,114,841 – 12,114,951	-	5	116	90.96	-1.69	0.74	0.574260
4609	3R_DroMel_CAF1	12,116,981 – 12,117,082	- - - - - - - - -	7574	12,116,981 – 12,117,082	+	6	115	81.07	-2.58	0.58	0.849772
4610	3R_DroMel_CAF1	12,118,430 – 12,118,574	- - - "knownCDS=Parent=FBtr0083262, FBtr0100332;Name=gish-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6963-RB, FlyBase+Annotation+IDs:CG6963-RG" - - - - -	7575	12,118,430 – 12,118,538	+	6	119	89.82	-1.96	0.97	0.997407
				7576	12,118,430 – 12,118,538	-	6	119	89.82	-2.66	0.88	0.989001
				7577	12,118,458 – 12,118,574	+	6	120	91.67	-2.29	0.90	0.992569
				7578	12,118,458 – 12,118,574	-	6	120	91.67	-3.39	0.91	0.999735
4611	3R_DroMel_CAF1	12,121,503 – 12,121,595	- - - - - - - - -	7579	12,121,503 – 12,121,595	+	6	103	83.11	-1.65	0.67	0.500000
4612	3R_DroMel_CAF1	12,127,672 – 12,127,821	- - - - - - - - -	7580	12,127,672 – 12,127,792	+	6	120	95.22	-1.73	0.98	0.998983
				7581	12,127,672 – 12,127,792	-	6	120	95.22	-1.35	0.92	0.893483
				7582	12,127,712 – 12,127,821	+	6	120	89.32	-2.32	0.99	0.999630
4613	3R_DroMel_CAF1	12,128,610 – 12,128,702	- - - - - - - - -	7583	12,128,610 – 12,128,702	+	5	120	76.64	-2.60	0.32	0.991500
4613	3R_DroMel_CAF1	12,128,610 – 12,128,702	- - - - - - - - -	7584	12,128,610 – 12,128,702	-	5	120	76.64	-2.41	0.42	0.976666
4614	3R_DroMel_CAF1	12,131,748 – 12,131,845	- - - - - - - - -	7585	12,131,748 – 12,131,845	+	5	97	95.05	-1.44	0.81	0.518025
4615	3R_DroMel_CAF1	12,132,373 – 12,132,482	- - - "knownCDS=Parent=FBtr0083266;Name=Zip3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6898-RA" - - - - -	7586	12,132,373 – 12,132,482	-	6	109	88.07	-1.93	0.87	0.849802
4616	3R_DroMel_CAF1	12,133,102 – 12,133,205	- - - - - - - - -	7587	12,133,102 – 12,133,205	-	5	112	75.77	-1.77	0.06	0.872073
4617	3R_DroMel_CAF1	12,142,145 – 12,142,275	- - - - - - - - -	7588	12,142,145 – 12,142,246	-	5	107	94.58	-2.33	0.89	0.998741
				7589	12,142,170 – 12,142,275	+	5	105	94.06	-1.27	0.85	0.548396
				7590	12,142,170 – 12,142,275	-	5	105	94.06	-3.19	0.80	0.995799
4618	3R_DroMel_CAF1	12,142,322 – 12,142,432	- - - - - - - - -	7591	12,142,322 – 12,142,432	-	5	116	88.11	-1.53	0.77	0.567695
4619	3R_DroMel_CAF1	12,147,402 – 12,147,492	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000219;Name=Dmel_Val_AAC_14000219;TFAMID=DmelVAAC-12147412" "tRNAscan=type:Val:anticodon:AAC f:12147411_t:12147492_strand=+_cove=80.36" - - "Rfam=AE003538.3/287237-287309_RF00005;tRNA;\|6e-26" - - - "Flybase=FBgn0012011:transfer_RNA:val4:89BC:cytosolic_tRNA_gene\|2e-37"	7592	12,147,402 – 12,147,492	+	6	120	75.41	-1.98	0.88	0.977599
4619	3R_DroMel_CAF1	12,147,402 – 12,147,492		7593	12,147,402 – 12,147,492	-	6	120	75.41	-1.34	0.90	0.939045
4620	3R_DroMel_CAF1	12,151,950 – 12,152,059	- - - - - - - - -	7594	12,151,950 – 12,152,059	-	5	120	88.30	-1.46	0.81	0.599722
4621	3R_DroMel_CAF1	12,156,997 – 12,157,094	- - - - - - - - -	7595	12,156,997 – 12,157,094	+	6	98	89.43	-2.54	0.88	0.983324
4622	3R_DroMel_CAF1	12,157,248 – 12,157,343	- - - - - - - - -	7596	12,157,248 – 12,157,343	+	6	101	82.89	-2.35	0.64	0.678218
4623	3R_DroMel_CAF1	12,161,306 – 12,161,406	- - - - - - - - -	7597	12,161,306 – 12,161,406	-	6	115	89.59	-2.71	0.86	0.975530
4624	3R_DroMel_CAF1	12,165,948 – 12,166,089	- - - - - - - - -	7598	12,165,948 – 12,166,053	+	6	110	80.94	-1.59	0.68	0.680390
				7599	12,165,948 – 12,166,053	-	6	110	80.94	-1.62	0.62	0.557041
				7600	12,165,982 – 12,166,089	+	6	112	80.49	-2.08	0.53	0.563506
				7601	12,165,982 – 12,166,089	-	6	112	80.49	-2.26	0.51	0.618420
4625	3R_DroMel_CAF1	12,169,404 – 12,169,499	- - - "knownCDS=Parent=FBtr0083282;Name=CG10309-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10309-RA" - - - - -	7602	12,169,404 – 12,169,499	+	6	106	79.66	-1.96	0.53	0.602194
4625	3R_DroMel_CAF1	12,169,404 – 12,169,499		7603	12,169,404 – 12,169,499	-	6	106	79.66	-1.84	0.69	0.867267
4626	3R_DroMel_CAF1	12,173,152 – 12,173,260	- - - "knownCDS=Parent=FBtr0083326;Name=CG14879-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14879-RB" - - - - -	7604	12,173,152 – 12,173,260	-	6	120	76.37	-2.45	0.62	0.985383
4627	3R_DroMel_CAF1	12,175,474 – 12,175,572	- - - - - - - - -	7605	12,175,474 – 12,175,572	+	6	98	81.43	-1.75	0.71	0.746716
4628	3R_DroMel_CAF1	12,175,716 – 12,175,881	- - - - - - - - -	7606	12,175,716 – 12,175,807	-	4	91	81.49	-1.63	0.77	0.689491
4628	3R_DroMel_CAF1	12,175,716 – 12,175,881	- - - - - - - - -	7607	12,175,784 – 12,175,881	+	3	103	85.71	-1.77	0.78	0.556393
4629	3R_DroMel_CAF1	12,177,323 – 12,177,543	- - - - - - - - -	7608	12,177,323 – 12,177,428	+	6	109	71.41	-1.86	0.51	0.903603
4629	3R_DroMel_CAF1	12,177,323 – 12,177,543	- - - - - - - - -	7609	12,177,428 – 12,177,543	-	6	119	77.30	-1.72	0.54	0.583946
4630	3R_DroMel_CAF1	12,179,258 – 12,179,360	- - - - - - - - -	7610	12,179,258 – 12,179,360	-	6	114	81.12	-2.12	0.55	0.583701
4631	3R_DroMel_CAF1	12,180,345 – 12,180,467	- - - - - - - - -	7611	12,180,345 – 12,180,438	+	6	96	80.99	-2.76	0.72	0.937485
				7612	12,180,345 – 12,180,438	-	6	96	80.99	-3.50	0.70	0.961480
				7613	12,180,365 – 12,180,467	-	6	109	82.43	-3.19	0.54	0.813454
4632	3R_DroMel_CAF1	12,183,572 – 12,183,683	- - - - - - - - -	7614	12,183,572 – 12,183,683	-	4	111	86.64	-1.64	0.66	0.531008
4633	3R_DroMel_CAF1	12,184,992 – 12,185,114	- - - - - - - - -	7615	12,184,992 – 12,185,090	+	5	102	92.97	-1.71	0.85	0.936884
				7616	12,184,992 – 12,185,090	-	5	102	92.97	-2.27	0.82	0.982825
				7617	12,185,013 – 12,185,114	+	5	103	91.55	-2.34	0.77	0.947478
				7618	12,185,013 – 12,185,114	-	5	103	91.55	-2.40	0.77	0.951865
4634	3R_DroMel_CAF1	12,188,406 – 12,188,651	- - - - - - - - -	7619	12,188,406 – 12,188,526	+	5	120	93.71	-1.59	0.96	0.990382
				7620	12,188,446 – 12,188,546	+	5	100	94.26	-1.30	0.94	0.896407
				7621	12,188,546 – 12,188,651	+	5	105	95.05	-1.54	0.80	0.561542
4635	3R_DroMel_CAF1	12,189,283 – 12,189,390	- - - - - - - - -	7622	12,189,283 – 12,189,390	-	5	107	88.22	-2.33	0.74	0.906831
4636	3R_DroMel_CAF1	12,191,618 – 12,191,709	- - - - - - - - -	7623	12,191,618 – 12,191,709	+	6	104	72.72	-1.85	0.47	0.776440
4636	3R_DroMel_CAF1	12,191,618 – 12,191,709	- - - - - - - - -	7624	12,191,618 – 12,191,709	-	6	104	72.72	-1.85	0.47	0.794385
4637	3R_DroMel_CAF1	12,193,510 – 12,193,617	- - - - - - - - -	7625	12,193,510 – 12,193,617	+	4	107	90.19	-1.61	0.84	0.727598
4637	3R_DroMel_CAF1	12,193,510 – 12,193,617	- - - - - - - - -	7626	12,193,510 – 12,193,617	-	4	107	90.19	-1.56	0.80	0.620898
4638	3R_DroMel_CAF1	12,203,347 – 12,203,463	- - - "knownCDS=Parent=FBtr0083318;Name=ss-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6993-RA" - - - - -	7627	12,203,347 – 12,203,463	+	5	119	95.63	-1.62	0.90	0.958823
4639	3R_DroMel_CAF1	12,205,418 – 12,205,531	- - - "knownCDS=Parent=FBtr0083318;Name=ss-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6993-RA" - - - - -	7628	12,205,418 – 12,205,531	-	6	120	89.99	-1.79	0.88	0.865916
4640	3R_DroMel_CAF1	12,206,995 – 12,207,091	- - - - - - - - -	7629	12,206,995 – 12,207,091	+	6	104	77.95	-1.80	0.54	0.636147
4641	3R_DroMel_CAF1	12,208,748 – 12,208,843	- - - - - - - - -	7630	12,208,748 – 12,208,843	+	6	104	77.14	-1.55	0.56	0.508998
4642	3R_DroMel_CAF1	12,219,886 – 12,219,980	- - - - - - - - -	7631	12,219,886 – 12,219,980	+	5	120	70.63	-1.68	0.11	0.596775
4643	3R_DroMel_CAF1	12,221,415 – 12,221,510	- - - - - - - - -	7632	12,221,415 – 12,221,510	+	4	98	81.43	-2.86	0.69	0.993622
4644	3R_DroMel_CAF1	12,224,751 – 12,224,853	- - - - - - - - -	7633	12,224,751 – 12,224,853	+	5	102	88.33	-1.89	0.79	0.860724
4645	3R_DroMel_CAF1	12,225,657 – 12,225,775	- - - - - - - - -	7634	12,225,657 – 12,225,775	-	4	118	79.94	-1.84	0.60	0.598531
4646	3R_DroMel_CAF1	12,233,749 – 12,233,845	- - - - - - - - -	7635	12,233,749 – 12,233,845	-	6	103	80.78	-1.61	0.71	0.748740
4647	3R_DroMel_CAF1	12,234,802 – 12,234,896	- - - - - - - - -	7636	12,234,802 – 12,234,896	+	6	118	80.66	-2.16	0.61	0.812768
4647	3R_DroMel_CAF1	12,234,802 – 12,234,896	- - - - - - - - -	7637	12,234,802 – 12,234,896	-	6	118	80.66	-2.33	0.58	0.819498
4648	3R_DroMel_CAF1	12,237,327 – 12,237,426	- - - - - - - - -	7638	12,237,327 – 12,237,426	-	5	109	74.13	-1.79	0.34	0.666002
4649	3R_DroMel_CAF1	12,237,666 – 12,237,763	- - - - - - - - -	7639	12,237,666 – 12,237,763	+	6	111	76.80	-2.21	0.39	0.582359
4650	3R_DroMel_CAF1	12,244,915 – 12,245,006	- - - - - - - - -	7640	12,244,915 – 12,245,006	+	6	99	86.52	-2.45	0.79	0.747661
4651	3R_DroMel_CAF1	12,248,466 – 12,248,570	- - - - - - - - -	7641	12,248,466 – 12,248,570	+	5	110	82.24	-3.17	0.47	0.958171
4652	3R_DroMel_CAF1	12,248,634 – 12,248,734	- - - - - - - - -	7642	12,248,634 – 12,248,734	+	4	108	82.37	-1.66	0.78	0.709377
4653	3R_DroMel_CAF1	12,250,689 – 12,250,791	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000220;Name=Dmel_Thr_AGT_14000220;TFAMID=DmelTAGT-12250782" "tRNAscan=type:Thr:anticodon:AGT f:12250708_t:12250800_strand=-_cove=75.61" - - "Rfam=AE003713.3/89788-89861_RF00005;tRNA;\|5e-36" - - - "Flybase=FBgn0011993:transfer_RNA:thr:90Ca:cytosolic_tRNA_gene\|6e-38"	7643	12,250,689 – 12,250,791	+	6	119	77.06	-1.46	0.84	0.923622
4654	3R_DroMel_CAF1	12,254,022 – 12,254,133	- - - - - - - - -	7644	12,254,022 – 12,254,133	+	6	120	81.97	-1.50	0.68	0.555101
4655	3R_DroMel_CAF1	12,257,644 – 12,257,776	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000221;Name=Dmel_Thr_AGT_14000221;TFAMID=DmelTAGT-12257662" "tRNAscan=type:Thr:anticodon:AGT f:12257661_t:12257751_strand=+_cove=75.61" - - "Rfam=AE003713.3/89788-89861_RF00005;tRNA;\|6e-36" - - - "Flybase=FBgn0011993:transfer_RNA:thr:90Ca:cytosolic_tRNA_gene\|9e-38"	7645	12,257,644 – 12,257,753	-	6	120	77.18	-0.92	0.84	0.706923
4655	3R_DroMel_CAF1	12,257,644 – 12,257,776		7646	12,257,684 – 12,257,776	-	6	94	81.82	-1.40	0.70	0.558803
4656	3R_DroMel_CAF1	12,261,786 – 12,261,898	- - - "knownCDS=Parent=FBtr0083316;Name=mRpS33-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10406-RA" - - - - -	7647	12,261,786 – 12,261,898	-	6	120	80.82	-2.08	0.58	0.705118
4657	3R_DroMel_CAF1	12,269,706 – 12,269,822	- - - "knownCDS=Parent=FBtr0083289;Name=CG14882-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14882-RA" - - - - -	7648	12,269,706 – 12,269,822	-	6	116	72.87	-2.53	0.25	0.819525
4658	3R_DroMel_CAF1	12,278,564 – 12,278,684	- - - - - - - - -	7649	12,278,564 – 12,278,684	-	4	120	92.20	-1.63	0.82	0.650494
4659	3R_DroMel_CAF1	12,279,511 – 12,279,630	- - - - - - - - -	7650	12,279,511 – 12,279,630	-	4	120	87.45	-1.91	0.73	0.778750
4660	3R_DroMel_CAF1	12,280,293 – 12,280,387	- - - "knownCDS=Parent=FBtr0083290;Name=CG10405-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10405-RA" - - - - -	7651	12,280,293 – 12,280,387	+	5	94	91.28	-1.40	0.86	0.753563
4661	3R_DroMel_CAF1	12,289,713 – 12,289,824	- - - - - - - - -	7652	12,289,713 – 12,289,824	+	5	117	76.27	-1.90	0.48	0.728248
4662	3R_DroMel_CAF1	12,293,755 – 12,293,851	- - - "knownCDS=Parent=FBtr0083310;Name=CG14897-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14897-RB" - - - - -	7653	12,293,755 – 12,293,851	+	6	97	84.78	-1.70	0.83	0.650394
4663	3R_DroMel_CAF1	12,295,034 – 12,295,138	- - - "knownCDS=Parent=FBtr0083310;Name=CG14897-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14897-RB" - - - - -	7654	12,295,034 – 12,295,138	-	6	104	78.72	-1.61	0.58	0.569033
4664	3R_DroMel_CAF1	12,299,047 – 12,299,150	- - - - - - - - -	7655	12,299,047 – 12,299,150	+	6	103	78.22	-1.67	0.76	0.918295
4665	3R_DroMel_CAF1	12,310,590 – 12,310,750	- - - "knownCDS=Parent=FBtr0083306;Name=Cad89D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14900-RA" - - - - -	7656	12,310,590 – 12,310,710	+	3	120	98.33	-1.72	0.95	0.678927
				7657	12,310,630 – 12,310,750	+	3	120	97.22	-1.75	0.98	0.774698
				7658	12,310,630 – 12,310,750	-	3	120	97.22	-1.76	0.92	0.622995
4666	3R_DroMel_CAF1	12,311,561 – 12,311,680	- - - "knownCDS=Parent=FBtr0083306;Name=Cad89D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14900-RA" - - - - -	7659	12,311,561 – 12,311,680	-	3	120	71.11	-1.60	0.59	0.819938
4667	3R_DroMel_CAF1	12,318,541 – 12,318,661	- - - "knownCDS=Parent=FBtr0083306;Name=Cad89D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14900-RA" - - - - -	7660	12,318,541 – 12,318,661	-	3	120	87.22	-1.65	0.89	0.699688
4668	3R_DroMel_CAF1	12,318,834 – 12,318,994	- - - - - - - - -	7661	12,318,834 – 12,318,954	+	3	120	97.78	-1.69	0.98	0.744984
				7662	12,318,834 – 12,318,954	-	3	120	97.78	-2.13	0.95	0.882490
				7663	12,318,874 – 12,318,994	+	3	120	96.67	-1.87	0.96	0.795175
4669	3R_DroMel_CAF1	12,319,153 – 12,319,273	- - - - - - - - -	7664	12,319,153 – 12,319,273	-	3	120	97.50	-2.04	0.93	0.793279
4670	3R_DroMel_CAF1	12,319,550 – 12,319,710	- - - - - - - - -	7665	12,319,550 – 12,319,670	+	3	120	98.33	-1.51	0.97	0.573017
				7666	12,319,550 – 12,319,670	-	3	120	98.33	-1.93	0.92	0.720247
				7667	12,319,590 – 12,319,710	-	3	120	96.11	-2.73	0.90	0.935175
4671	3R_DroMel_CAF1	12,321,157 – 12,321,274	- - - - - - - - -	7668	12,321,157 – 12,321,274	+	3	120	97.78	-1.84	0.90	0.582048
4671	3R_DroMel_CAF1	12,321,157 – 12,321,274	- - - - - - - - -	7669	12,321,157 – 12,321,274	-	3	120	97.78	-2.24	0.86	0.665900
4672	3R_DroMel_CAF1	12,321,747 – 12,321,867	- - - - - - - - -	7670	12,321,747 – 12,321,867	+	3	120	95.28	-2.81	0.86	0.885692
4673	3R_DroMel_CAF1	12,322,314 – 12,322,434	- - - - - - - - -	7671	12,322,314 – 12,322,434	+	3	120	97.78	-1.60	0.94	0.569822
4674	3R_DroMel_CAF1	12,324,565 – 12,324,685	- - - "knownCDS=Parent=FBtr0089695;Name=Gr89a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14901-RA" - - - - -	7672	12,324,565 – 12,324,685	-	3	120	97.22	-1.42	1.01	0.632642
4675	3R_DroMel_CAF1	12,326,907 – 12,327,099	- - - - - - - - -	7673	12,326,907 – 12,327,027	+	3	120	98.33	-2.65	0.96	0.963438
				7674	12,326,947 – 12,327,067	+	3	120	98.33	-2.77	0.96	0.975108
				7675	12,326,947 – 12,327,067	-	3	120	98.33	-3.94	0.95	0.979447
				7676	12,326,987 – 12,327,099	+	3	112	97.61	-3.23	0.95	0.984351
				7677	12,326,987 – 12,327,099	-	3	112	97.61	-2.98	0.94	0.972470
4676	3R_DroMel_CAF1	12,327,504 – 12,327,622	- - - - - - - - -	7678	12,327,504 – 12,327,622	-	3	119	92.70	-2.36	0.82	0.706797
4677	3R_DroMel_CAF1	12,328,357 – 12,328,517	- - - - - - - - -	7679	12,328,357 – 12,328,477	-	3	120	90.56	-3.09	0.80	0.898492
4677	3R_DroMel_CAF1	12,328,357 – 12,328,517	- - - - - - - - -	7680	12,328,397 – 12,328,517	-	3	120	94.44	-1.99	0.88	0.665474
4678	3R_DroMel_CAF1	12,328,985 – 12,329,103	- - - - - - - - -	7681	12,328,985 – 12,329,103	+	3	120	96.64	-1.81	0.98	0.829350
4679	3R_DroMel_CAF1	12,329,874 – 12,329,994	- - - - - - - - -	7682	12,329,874 – 12,329,994	-	3	120	97.78	-2.70	0.97	0.978465
4680	3R_DroMel_CAF1	12,333,813 – 12,333,912	- - - - - - - - -	7683	12,333,813 – 12,333,912	-	5	104	89.70	-1.68	0.73	0.563481
4681	3R_DroMel_CAF1	12,334,812 – 12,335,000	- - - - - - - - -	7684	12,334,812 – 12,334,930	+	6	120	74.86	-1.85	0.45	0.568847
4681	3R_DroMel_CAF1	12,334,812 – 12,335,000	- - - - - - - - -	7685	12,334,890 – 12,335,000	+	4	110	99.55	-2.40	1.00	0.879664
4682	3R_DroMel_CAF1	12,335,710 – 12,335,982	- - - - - - - - -	7686	12,335,710 – 12,335,819	+	4	116	92.47	-1.75	0.91	0.875965
				7687	12,335,819 – 12,335,910	-	4	95	91.22	-2.50	0.90	0.988802
				7688	12,335,849 – 12,335,946	-	4	101	91.25	-2.02	0.89	0.943918
				7689	12,335,876 – 12,335,982	+	4	110	94.29	-2.24	0.95	0.979255
				7690	12,335,876 – 12,335,982	-	4	110	94.29	-1.94	0.95	0.941549
4683	3R_DroMel_CAF1	12,336,341 – 12,336,489	- - - - - - - - -	7691	12,336,341 – 12,336,449	+	5	113	95.43	-1.03	0.95	0.500000
4683	3R_DroMel_CAF1	12,336,341 – 12,336,489	- - - - - - - - -	7692	12,336,369 – 12,336,489	+	5	120	98.50	-2.48	0.99	0.999666
4684	3R_DroMel_CAF1	12,336,684 – 12,336,777	- - - - - - - - -	7693	12,336,684 – 12,336,777	+	4	93	93.37	-2.07	0.90	0.939857
4685	3R_DroMel_CAF1	12,337,022 – 12,337,115	- - - - - - - - -	7694	12,337,022 – 12,337,115	+	4	116	82.96	-2.39	0.64	0.910819
4686	3R_DroMel_CAF1	12,337,625 – 12,337,736	- - - - - - - - -	7695	12,337,625 – 12,337,736	+	5	113	91.97	-1.88	0.79	0.865662
4686	3R_DroMel_CAF1	12,337,625 – 12,337,736	- - - - - - - - -	7696	12,337,625 – 12,337,736	-	5	113	91.97	-2.65	0.69	0.625433
4687	3R_DroMel_CAF1	12,337,858 – 12,337,999	- - - - - - - - -	7697	12,337,858 – 12,337,961	+	5	104	89.26	-3.31	0.78	0.995841
				7698	12,337,858 – 12,337,961	-	5	104	89.26	-2.26	0.66	0.506536
				7699	12,337,897 – 12,337,999	+	5	102	95.00	-1.65	0.91	0.977600
				7700	12,337,897 – 12,337,999	-	5	102	95.00	-1.89	0.90	0.993960
4688	3R_DroMel_CAF1	12,338,371 – 12,338,464	- - - - - - - - -	7701	12,338,371 – 12,338,464	-	5	101	93.56	-1.22	0.92	0.750826
4689	3R_DroMel_CAF1	12,339,562 – 12,339,682	- - - "knownCDS=Parent=FBtr0083296;Name=CG11769-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11769-RA" - - - - -	7702	12,339,562 – 12,339,682	-	6	120	92.17	-1.65	0.85	0.647708
4690	3R_DroMel_CAF1	12,342,144 – 12,342,261	- - - - - - - - -	7703	12,342,144 – 12,342,261	+	5	117	95.90	-2.48	0.78	0.916196
4691	3R_DroMel_CAF1	12,342,376 – 12,342,515	- - - - - - - - -	7704	12,342,376 – 12,342,475	-	3	99	97.98	-1.64	0.94	0.588712
4691	3R_DroMel_CAF1	12,342,376 – 12,342,515	- - - - - - - - -	7705	12,342,416 – 12,342,515	-	3	99	98.65	-1.42	0.97	0.500000
4692	3R_DroMel_CAF1	12,343,056 – 12,343,195	- - - - - - - - -	7706	12,343,056 – 12,343,155	+	5	105	93.59	-1.86	0.89	0.989957
				7707	12,343,056 – 12,343,155	-	5	105	93.59	-1.30	0.86	0.634536
				7708	12,343,086 – 12,343,195	+	5	115	91.67	-1.60	0.75	0.513719
4693	3R_DroMel_CAF1	12,343,883 – 12,344,129	- - - - - - - - -	7709	12,343,883 – 12,343,998	-	5	115	99.65	-2.92	0.97	0.999507
				7710	12,343,958 – 12,344,068	+	5	110	98.73	-1.46	0.94	0.850073
				7711	12,343,958 – 12,344,068	-	5	110	98.73	-2.34	0.95	0.998428
				7712	12,343,998 – 12,344,100	+	4	107	91.05	-2.55	0.92	0.992961
				7713	12,343,998 – 12,344,100	-	4	107	91.05	-2.13	0.83	0.920771
				7714	12,344,032 – 12,344,129	+	3	112	75.90	-1.78	0.70	0.951229
4694	3R_DroMel_CAF1	12,344,971 – 12,345,072	- - - - - - - - -	7715	12,344,971 – 12,345,072	+	5	106	94.08	-1.93	0.83	0.953295
4695	3R_DroMel_CAF1	12,345,691 – 12,345,870	- - - - - - - - -	7716	12,345,691 – 12,345,799	+	5	116	86.02	-2.36	0.82	0.981153
				7717	12,345,725 – 12,345,830	+	5	116	89.55	-1.57	0.78	0.663581
				7718	12,345,763 – 12,345,870	-	6	120	81.61	-1.29	0.70	0.510770
4696	3R_DroMel_CAF1	12,347,138 – 12,347,276	- - - - - - - - -	7719	12,347,138 – 12,347,237	+	5	102	96.01	-2.30	0.78	0.827971
				7720	12,347,138 – 12,347,237	-	5	102	96.01	-1.79	0.82	0.802515
				7721	12,347,162 – 12,347,276	-	6	120	78.87	-1.53	0.63	0.664020
4697	3R_DroMel_CAF1	12,347,490 – 12,347,596	- - - - - - - - -	7722	12,347,490 – 12,347,596	-	6	120	75.41	-1.87	0.53	0.812518
4698	3R_DroMel_CAF1	12,347,937 – 12,348,031	- - - - - - - - -	7723	12,347,937 – 12,348,031	+	6	119	75.67	-1.53	0.69	0.909835
4699	3R_DroMel_CAF1	12,348,788 – 12,348,878	- - - - - - - - -	7724	12,348,788 – 12,348,878	+	6	120	83.20	-1.70	0.70	0.544832
4700	3R_DroMel_CAF1	12,350,047 – 12,350,143	- - - - - - - - -	7725	12,350,047 – 12,350,143	+	6	110	69.81	-1.48	0.51	0.594147
4701	3R_DroMel_CAF1	12,351,340 – 12,351,433	- - - - - - - - -	7726	12,351,340 – 12,351,433	+	5	105	89.76	-1.50	0.75	0.500000
4702	3R_DroMel_CAF1	12,352,407 – 12,352,503	- - - - - - - - -	7727	12,352,407 – 12,352,503	+	5	100	90.40	-1.39	0.90	0.814498
4703	3R_DroMel_CAF1	12,352,619 – 12,352,718	- - - - - - - - -	7728	12,352,619 – 12,352,718	-	5	120	71.54	-1.58	0.06	0.623771
4704	3R_DroMel_CAF1	12,359,860 – 12,359,954	- - - - - - - - -	7729	12,359,860 – 12,359,954	-	3	102	92.81	-2.55	0.98	0.987334
4705	3R_DroMel_CAF1	12,360,923 – 12,361,038	- - - - - - - - -	7730	12,360,923 – 12,361,038	+	5	115	86.20	-1.40	0.86	0.500000
4706	3R_DroMel_CAF1	12,363,112 – 12,363,207	- - - - - - - - -	7731	12,363,112 – 12,363,207	+	5	98	85.22	-1.53	0.82	0.589644
4707	3R_DroMel_CAF1	12,364,911 – 12,365,021	- - - - - - - - -	7732	12,364,911 – 12,365,007	+	6	120	78.83	-1.44	0.67	0.723322
				7733	12,364,911 – 12,365,007	-	6	120	78.83	-1.62	0.69	0.841463
				7734	12,364,928 – 12,365,021	-	6	93	96.70	-1.11	0.90	0.577387
4708	3R_DroMel_CAF1	12,368,925 – 12,369,030	- - - - - - - - -	7735	12,368,925 – 12,369,030	+	6	118	82.92	-1.84	0.64	0.500000
4708	3R_DroMel_CAF1	12,368,925 – 12,369,030	- - - - - - - - -	7736	12,368,925 – 12,369,030	-	6	118	82.92	-2.37	0.75	0.834318
4709	3R_DroMel_CAF1	12,371,487 – 12,371,617	- - - - - - - - -	7737	12,371,487 – 12,371,596	+	5	115	75.91	-2.37	0.38	0.979146
				7738	12,371,487 – 12,371,596	-	5	115	75.91	-2.24	0.37	0.953809
				7739	12,371,525 – 12,371,617	+	5	115	77.61	-2.12	0.46	0.854000
4710	3R_DroMel_CAF1	12,373,398 – 12,373,490	- - - - - - - - -	7740	12,373,398 – 12,373,490	-	6	92	93.91	-1.33	0.89	0.685830
4711	3R_DroMel_CAF1	12,375,634 – 12,375,757	- - - - - - - - -	7741	12,375,634 – 12,375,730	+	6	104	88.77	-2.88	0.86	0.984544
4711	3R_DroMel_CAF1	12,375,634 – 12,375,757	- - - - - - - - -	7742	12,375,656 – 12,375,757	+	6	108	87.39	-4.06	0.85	0.994218
4712	3R_DroMel_CAF1	12,376,723 – 12,376,830	- - - - - - - - -	7743	12,376,723 – 12,376,830	-	6	110	83.90	-2.27	0.65	0.522399
4713	3R_DroMel_CAF1	12,377,290 – 12,377,391	- - - "knownCDS=Parent=FBtr0083298;Name=CG14888-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14888-RA" - - - - -	7744	12,377,290 – 12,377,391	-	6	111	85.50	-1.41	0.92	0.697363
4714	3R_DroMel_CAF1	12,377,487 – 12,377,597	- - - "knownCDS=Parent=FBtr0083298;Name=CG14888-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14888-RA" - - - - -	7745	12,377,487 – 12,377,597	+	6	120	73.48	-1.97	0.55	0.942481
4715	3R_DroMel_CAF1	12,377,637 – 12,377,730	- - - - - - - - -	7746	12,377,637 – 12,377,730	+	6	95	76.53	-1.96	0.69	0.964134
4716	3R_DroMel_CAF1	12,385,848 – 12,385,941	- - - - - - - - -	7747	12,385,848 – 12,385,941	+	5	93	84.78	-1.61	0.69	0.510515
4716	3R_DroMel_CAF1	12,385,848 – 12,385,941	- - - - - - - - -	7748	12,385,848 – 12,385,941	-	5	93	84.78	-2.36	0.62	0.758862
4717	3R_DroMel_CAF1	12,386,428 – 12,386,534	- - - - - - - - -	7749	12,386,428 – 12,386,534	+	3	111	84.08	-3.86	0.90	0.993220
4717	3R_DroMel_CAF1	12,386,428 – 12,386,534	- - - - - - - - -	7750	12,386,428 – 12,386,534	-	3	111	84.08	-2.79	0.80	0.967416
4718	3R_DroMel_CAF1	12,387,866 – 12,387,969	- - - - - - - - -	7751	12,387,866 – 12,387,969	-	6	118	81.52	-1.40	0.71	0.590226
4719	3R_DroMel_CAF1	12,390,912 – 12,391,032	- - - "knownCDS=Parent=FBtr0083299;Name=CG14889-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14889-RA" - - - - -	7752	12,390,912 – 12,391,032	+	6	120	80.83	-2.56	0.64	0.907370
4719	3R_DroMel_CAF1	12,390,912 – 12,391,032		7753	12,390,912 – 12,391,032	-	6	120	80.83	-2.45	0.69	0.913505
4720	3R_DroMel_CAF1	12,391,342 – 12,391,440	- - - - - - - - -	7754	12,391,342 – 12,391,440	+	6	120	67.38	-2.00	0.40	0.911343
4721	3R_DroMel_CAF1	12,391,804 – 12,391,897	- - - - - - - - -	7755	12,391,804 – 12,391,897	-	3	93	97.85	-1.87	0.97	0.814323
4722	3R_DroMel_CAF1	12,392,627 – 12,392,738	- - - - - - - - -	7756	12,392,627 – 12,392,738	-	4	118	90.54	-1.54	0.80	0.610455
4723	3R_DroMel_CAF1	12,401,827 – 12,401,919	- - - - - - - - -	7757	12,401,827 – 12,401,919	-	6	103	82.54	-1.98	0.67	0.660325
4724	3R_DroMel_CAF1	12,404,363 – 12,404,519	- - - - - - - - -	7758	12,404,363 – 12,404,456	-	6	110	75.41	-3.29	0.49	0.997771
				7759	12,404,392 – 12,404,494	-	6	116	72.45	-2.53	0.49	0.993103
				7760	12,404,424 – 12,404,519	-	6	101	74.05	-2.48	0.43	0.974954
4725	3R_DroMel_CAF1	12,404,720 – 12,404,824	- - - "knownCDS=Parent=FBtr0083361;Name=Scp2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14904-RA" - - - - -	7761	12,404,720 – 12,404,824	+	6	104	88.31	-2.55	0.79	0.737647
4726	3R_DroMel_CAF1	12,409,607 – 12,409,736	- - - - - - - - -	7762	12,409,607 – 12,409,701	-	3	114	70.19	-2.83	0.72	0.999998
4726	3R_DroMel_CAF1	12,409,607 – 12,409,736	- - - - - - - - -	7763	12,409,641 – 12,409,736	-	4	115	81.43	-1.82	0.66	0.721475
4727	3R_DroMel_CAF1	12,410,743 – 12,410,837	- - - - - - - - -	7764	12,410,743 – 12,410,837	+	6	95	93.64	-2.32	0.87	0.982643
4728	3R_DroMel_CAF1	12,412,805 – 12,412,901	- - - - - - - - -	7765	12,412,805 – 12,412,901	+	3	96	99.31	-1.51	1.00	0.667009
4729	3R_DroMel_CAF1	12,414,756 – 12,414,850	- - - - - - - - -	7766	12,414,756 – 12,414,850	+	5	96	89.24	-1.99	0.79	0.910764
4730	3R_DroMel_CAF1	12,417,060 – 12,417,154	- - - - - - - - -	7767	12,417,060 – 12,417,154	+	4	95	79.07	-2.89	0.71	0.998619
4730	3R_DroMel_CAF1	12,417,060 – 12,417,154	- - - - - - - - -	7768	12,417,060 – 12,417,154	-	4	95	79.07	-2.07	0.60	0.827189
4731	3R_DroMel_CAF1	12,417,500 – 12,417,592	- - - - - - - - -	7769	12,417,500 – 12,417,592	+	4	106	85.81	-2.60	0.77	0.973484
4731	3R_DroMel_CAF1	12,417,500 – 12,417,592	- - - - - - - - -	7770	12,417,500 – 12,417,592	-	4	106	85.81	-3.80	0.65	0.969268
4732	3R_DroMel_CAF1	12,419,354 – 12,419,509	- - - - - - - - -	7771	12,419,354 – 12,419,473	-	3	119	95.80	-3.38	0.95	0.989352
4732	3R_DroMel_CAF1	12,419,354 – 12,419,509	- - - - - - - - -	7772	12,419,393 – 12,419,509	-	3	116	94.54	-4.92	0.96	0.971004
4733	3R_DroMel_CAF1	12,421,262 – 12,421,421	- - - - - - - - -	7773	12,421,262 – 12,421,382	+	5	120	82.99	-1.60	0.68	0.505317
4733	3R_DroMel_CAF1	12,421,262 – 12,421,421	- - - - - - - - -	7774	12,421,302 – 12,421,421	+	5	120	84.73	-2.45	0.55	0.575191
4734	3R_DroMel_CAF1	12,421,646 – 12,421,750	- - - - - - - - -	7775	12,421,646 – 12,421,750	+	6	118	72.79	-1.41	0.57	0.582053
4735	3R_DroMel_CAF1	12,421,987 – 12,422,092	- - - "knownCDS=Parent=FBtr0083327;Name=CG14892-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14892-RA" - - - - -	7776	12,421,987 – 12,422,092	-	6	120	78.42	-2.01	0.48	0.569607
4736	3R_DroMel_CAF1	12,423,020 – 12,423,113	- - - "knownCDS=Parent=FBtr0083360;Name=CG10345-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10345-RA" - - - - -	7777	12,423,020 – 12,423,113	-	6	108	77.07	-1.75	0.59	0.807273
4737	3R_DroMel_CAF1	12,423,186 – 12,423,294	- - - "knownCDS=Parent=FBtr0083360;Name=CG10345-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10345-RA" - - - - -	7778	12,423,186 – 12,423,294	+	6	111	90.03	-2.08	0.82	0.688208
4738	3R_DroMel_CAF1	12,428,175 – 12,428,266	- - - - - - - - -	7779	12,428,175 – 12,428,266	-	5	106	70.21	-1.58	0.51	0.514660
4739	3R_DroMel_CAF1	12,428,312 – 12,428,407	- - - - - - - - -	7780	12,428,312 – 12,428,407	-	3	95	87.14	-2.04	0.89	0.887414
4740	3R_DroMel_CAF1	12,433,319 – 12,433,456	- - - - - - - - -	7781	12,433,319 – 12,433,416	+	3	97	95.88	-1.89	0.88	0.580876
				7782	12,433,319 – 12,433,416	-	3	97	95.88	-1.99	0.94	0.822523
				7783	12,433,343 – 12,433,456	+	3	113	93.51	-2.27	0.80	0.569456
4741	3R_DroMel_CAF1	12,436,290 – 12,436,380	- - - - - - - - -	7784	12,436,290 – 12,436,380	-	3	101	88.45	-2.32	0.74	0.639016
4742	3R_DroMel_CAF1	12,443,519 – 12,443,639	- - - - - - - - -	7785	12,443,519 – 12,443,639	+	5	120	94.83	-1.51	0.88	0.907289
4743	3R_DroMel_CAF1	12,447,596 – 12,447,705	- - - "knownCDS=Parent=FBtr0083331;Name=CG14893-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14893-RA" - - - - -	7786	12,447,596 – 12,447,705	-	6	112	79.70	-1.76	0.58	0.603631
4744	3R_DroMel_CAF1	12,447,816 – 12,447,931	- - - "knownCDS=Parent=FBtr0083331;Name=CG14893-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14893-RA" - - - - -	7787	12,447,816 – 12,447,931	-	6	115	82.03	-1.36	0.69	0.513863
4745	3R_DroMel_CAF1	12,451,735 – 12,451,825	- - - - - - - "ncRNAdb=MmuscAK038224_unclassifiable\|7e-08" -	7788	12,451,735 – 12,451,825	+	3	93	89.13	-2.13	0.94	0.941222
4745	3R_DroMel_CAF1	12,451,735 – 12,451,825		7789	12,451,735 – 12,451,825	-	3	93	89.13	-1.84	0.82	0.527502
4746	3R_DroMel_CAF1	12,455,863 – 12,455,965	- - - - - - - - -	7790	12,455,863 – 12,455,965	+	4	102	88.24	-1.57	0.75	0.614090
4747	3R_DroMel_CAF1	12,456,021 – 12,456,160	- - - - - - - - -	7791	12,456,021 – 12,456,121	-	4	111	81.36	-2.10	0.69	0.905315
4747	3R_DroMel_CAF1	12,456,021 – 12,456,160	- - - - - - - - -	7792	12,456,051 – 12,456,160	-	4	111	87.27	-2.06	0.88	0.949049
4748	3R_DroMel_CAF1	12,456,498 – 12,456,633	- - - - - - - - -	7793	12,456,498 – 12,456,618	+	3	120	88.70	-1.39	0.90	0.527685
				7794	12,456,538 – 12,456,633	+	3	101	90.40	-3.45	0.87	0.970634
				7795	12,456,538 – 12,456,633	-	3	101	90.40	-1.55	0.99	0.884935
4749	3R_DroMel_CAF1	12,456,878 – 12,456,977	- - - - - - - - -	7796	12,456,878 – 12,456,977	-	4	107	84.95	-1.95	0.60	0.546120
4750	3R_DroMel_CAF1	12,457,040 – 12,457,134	- - - - - - - - -	7797	12,457,040 – 12,457,134	-	4	98	89.88	-2.24	0.72	0.779945
4751	3R_DroMel_CAF1	12,457,519 – 12,457,630	- - - "knownCDS=Parent=FBtr0083332, FBtr0083333, FBtr0083334;Name=Fas1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6588-RA, FlyBase+Annotation+IDs:CG6588-RB, FlyBase+Annotation+IDs:CG6588-RC" - - - - -	7798	12,457,519 – 12,457,630	+	6	111	73.17	-1.70	0.55	0.836930
4752	3R_DroMel_CAF1	12,459,747 – 12,459,863	- - - - - - - - -	7799	12,459,747 – 12,459,863	+	3	118	81.53	-2.56	0.74	0.972114
4753	3R_DroMel_CAF1	12,475,401 – 12,475,500	- - - - - - - - -	7800	12,475,401 – 12,475,500	+	6	107	79.78	-1.22	0.67	0.525888
4754	3R_DroMel_CAF1	12,476,152 – 12,476,272	- - - "knownCDS=Parent=FBtr0083355;Name=CG14906-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14906-RA" - - - - -	7801	12,476,152 – 12,476,272	-	6	120	74.33	-1.85	0.53	0.860563
4755	3R_DroMel_CAF1	12,481,683 – 12,481,775	- - - - - - - - -	7802	12,481,683 – 12,481,775	-	5	94	73.21	-1.73	0.36	0.576336
4756	3R_DroMel_CAF1	12,483,315 – 12,483,411	- - - - - - - - -	7803	12,483,315 – 12,483,411	+	6	109	79.42	-1.19	0.68	0.552285
4757	3R_DroMel_CAF1	12,483,488 – 12,483,582	- - - - - - - - -	7804	12,483,488 – 12,483,582	-	6	97	81.64	-1.57	0.87	0.777557
4758	3R_DroMel_CAF1	12,484,423 – 12,484,519	- - - - - - - - -	7805	12,484,423 – 12,484,519	+	5	102	80.97	-1.84	0.70	0.789521
4759	3R_DroMel_CAF1	12,484,838 – 12,484,950	- - - - - - - - -	7806	12,484,838 – 12,484,950	-	3	116	85.21	-3.08	0.57	0.574418
4760	3R_DroMel_CAF1	12,489,144 – 12,489,241	- - - - - - - - -	7807	12,489,144 – 12,489,241	-	6	102	74.51	-1.78	0.55	0.834749
4761	3R_DroMel_CAF1	12,489,870 – 12,489,962	- - - - - - - - -	7808	12,489,870 – 12,489,962	-	6	97	80.10	-1.95	0.57	0.682259
4762	3R_DroMel_CAF1	12,490,763 – 12,490,894	- - - "knownCDS=Parent=FBtr0083339;Name=CG31498-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31498-RA" - - - - -	7809	12,490,763 – 12,490,858	-	6	101	85.29	-3.23	0.66	0.616767
				7810	12,490,789 – 12,490,894	+	6	120	76.26	-2.97	0.43	0.988290
				7811	12,490,789 – 12,490,894	-	6	120	76.26	-2.61	0.41	0.945560
4763	3R_DroMel_CAF1	12,491,569 – 12,491,687	- - - - - - - - -	7812	12,491,569 – 12,491,687	+	6	120	91.36	-2.26	0.88	0.980340
4764	3R_DroMel_CAF1	12,494,153 – 12,494,246	- - - - - - - - -	7813	12,494,153 – 12,494,246	+	6	110	82.50	-1.88	0.63	0.541875
4765	3R_DroMel_CAF1	12,495,958 – 12,496,077	- - - - - - - - -	7814	12,495,958 – 12,496,048	-	5	90	96.89	-1.95	0.93	0.996287
				7815	12,495,979 – 12,496,077	+	5	98	96.94	-1.89	0.87	0.957559
				7816	12,495,979 – 12,496,077	-	5	98	96.94	-3.63	0.90	0.999819
4766	3R_DroMel_CAF1	12,496,523 – 12,496,613	- - - - - - - - -	7817	12,496,523 – 12,496,613	+	6	91	96.38	-2.03	0.93	0.997932
4766	3R_DroMel_CAF1	12,496,523 – 12,496,613	- - - - - - - - -	7818	12,496,523 – 12,496,613	-	6	91	96.38	-2.76	0.83	0.944526
4767	3R_DroMel_CAF1	12,497,684 – 12,497,784	- - - - - - - - -	7819	12,497,684 – 12,497,784	+	6	116	78.10	-1.28	0.73	0.778898
4768	3R_DroMel_CAF1	12,498,047 – 12,498,145	- - - - - - - - -	7820	12,498,047 – 12,498,145	+	6	120	76.61	-1.80	0.50	0.548613
4769	3R_DroMel_CAF1	12,499,620 – 12,499,715	- - - - - - - - -	7821	12,499,620 – 12,499,715	-	6	107	76.16	-1.35	0.60	0.500000
4770	3R_DroMel_CAF1	12,502,151 – 12,502,242	- - - - - - - - -	7822	12,502,151 – 12,502,242	+	5	109	84.30	-1.61	0.70	0.532640
4771	3R_DroMel_CAF1	12,502,422 – 12,502,512	- - - - - - - - -	7823	12,502,422 – 12,502,512	-	5	115	73.99	-1.68	0.52	0.561581
4772	3R_DroMel_CAF1	12,504,190 – 12,504,284	- - - - - - - - -	7824	12,504,190 – 12,504,284	-	4	99	83.36	-2.11	0.63	0.778265
4773	3R_DroMel_CAF1	12,506,056 – 12,506,163	- - - - - - - - -	7825	12,506,056 – 12,506,163	+	6	120	78.38	-2.20	0.57	0.904913
4774	3R_DroMel_CAF1	12,506,932 – 12,507,052	- - - - - - - - -	7826	12,506,932 – 12,507,025	+	6	120	77.05	-1.71	0.60	0.799873
				7827	12,506,932 – 12,507,025	-	6	120	77.05	-2.54	0.62	0.984002
				7828	12,506,961 – 12,507,052	+	6	110	80.13	-2.00	0.53	0.567078
4775	3R_DroMel_CAF1	12,508,703 – 12,508,843	- - - - - - - - -	7829	12,508,703 – 12,508,813	-	6	118	71.07	-2.48	0.33	0.961531
				7830	12,508,741 – 12,508,843	+	6	109	85.83	-2.53	0.79	0.786915
				7831	12,508,741 – 12,508,843	-	6	109	85.83	-4.26	0.77	0.966831
4776	3R_DroMel_CAF1	12,510,926 – 12,511,059	- - - - - - - - -	7832	12,510,926 – 12,511,024	-	5	120	83.10	-2.65	0.82	0.991440
				7833	12,510,961 – 12,511,059	+	5	120	77.47	-1.89	0.55	0.740141
				7834	12,510,961 – 12,511,059	-	5	120	77.47	-2.44	0.67	0.991570
4777	3R_DroMel_CAF1	12,511,177 – 12,511,271	- - - - - - - - -	7835	12,511,177 – 12,511,271	+	4	96	82.36	-2.08	0.59	0.659161
4778	3R_DroMel_CAF1	12,511,770 – 12,511,868	- - - - - - - - -	7836	12,511,770 – 12,511,868	+	3	99	96.63	-1.98	0.93	0.772825
4778	3R_DroMel_CAF1	12,511,770 – 12,511,868	- - - - - - - - -	7837	12,511,770 – 12,511,868	-	3	99	96.63	-3.19	0.98	0.992221
4779	3R_DroMel_CAF1	12,511,975 – 12,512,118	- - - - - - - - -	7838	12,511,975 – 12,512,085	-	5	120	87.82	-1.78	0.85	0.910031
4779	3R_DroMel_CAF1	12,511,975 – 12,512,118	- - - - - - - - -	7839	12,512,007 – 12,512,118	+	5	120	74.72	-1.05	0.84	0.933154
4780	3R_DroMel_CAF1	12,512,154 – 12,512,266	- - - - - - - - -	7840	12,512,154 – 12,512,266	-	5	120	92.88	-2.27	0.88	0.998109
4781	3R_DroMel_CAF1	12,512,973 – 12,513,102	- - - - - - - - -	7841	12,512,973 – 12,513,066	+	6	120	75.47	-2.10	0.75	0.984072
				7842	12,513,003 – 12,513,102	+	6	120	84.56	-2.04	0.82	0.795738
				7843	12,513,003 – 12,513,102	-	6	120	84.56	-2.12	0.77	0.697684
4782	3R_DroMel_CAF1	12,513,773 – 12,513,935	- - - - - - - - -	7844	12,513,773 – 12,513,865	+	5	108	72.78	-2.03	0.37	0.923286
				7845	12,513,805 – 12,513,896	+	5	100	72.11	-2.23	0.55	0.988690
				7846	12,513,839 – 12,513,935	+	5	102	80.57	-3.32	0.72	0.998523
4783	3R_DroMel_CAF1	12,514,061 – 12,514,179	- - - - - - - - -	7847	12,514,061 – 12,514,179	+	3	119	93.84	-1.96	0.89	0.712788
4783	3R_DroMel_CAF1	12,514,061 – 12,514,179	- - - - - - - - -	7848	12,514,061 – 12,514,179	-	3	119	93.84	-1.35	0.98	0.539580
4784	3R_DroMel_CAF1	12,514,419 – 12,514,594	- - - - - - - - -	7849	12,514,419 – 12,514,534	+	5	115	93.74	-1.21	0.88	0.609436
4784	3R_DroMel_CAF1	12,514,419 – 12,514,594	- - - - - - - - -	7850	12,514,494 – 12,514,594	+	5	120	74.46	-1.70	0.65	0.875599
4785	3R_DroMel_CAF1	12,515,396 – 12,515,504	- - - - - - - - -	7851	12,515,396 – 12,515,504	-	6	120	87.14	-1.74	0.85	0.662651
4786	3R_DroMel_CAF1	12,516,307 – 12,516,428	- - - - - - - - -	7852	12,516,307 – 12,516,403	+	6	120	81.48	-2.20	0.62	0.758389
				7853	12,516,307 – 12,516,403	-	6	120	81.48	-2.11	0.70	0.829825
				7854	12,516,333 – 12,516,428	-	6	109	84.28	-1.53	0.80	0.525503
4787	3R_DroMel_CAF1	12,519,084 – 12,519,217	- - - - - - - - -	7855	12,519,084 – 12,519,196	+	6	120	86.89	-2.16	0.80	0.679900
4787	3R_DroMel_CAF1	12,519,084 – 12,519,217	- - - - - - - - -	7856	12,519,124 – 12,519,217	+	6	111	77.96	-1.96	0.63	0.913652
4788	3R_DroMel_CAF1	12,519,573 – 12,519,666	- - - - - - - - -	7857	12,519,573 – 12,519,666	+	6	102	78.83	-1.28	0.67	0.614981
4789	3R_DroMel_CAF1	12,521,387 – 12,521,509	- - - - - - - - -	7858	12,521,387 – 12,521,490	+	5	107	95.62	-1.94	1.00	0.999366
4789	3R_DroMel_CAF1	12,521,387 – 12,521,509	- - - - - - - - -	7859	12,521,417 – 12,521,509	-	6	94	81.55	-2.19	0.66	0.801426
4790	3R_DroMel_CAF1	12,521,966 – 12,522,096	- - - - - - - - -	7860	12,521,966 – 12,522,056	-	6	104	92.04	-1.55	0.85	0.584346
4790	3R_DroMel_CAF1	12,521,966 – 12,522,096	- - - - - - - - -	7861	12,521,976 – 12,522,096	-	6	120	95.19	-1.09	0.90	0.570288
4791	3R_DroMel_CAF1	12,524,035 – 12,524,126	- - - - - - - - -	7862	12,524,035 – 12,524,126	+	6	119	80.35	-2.78	0.70	0.951529
4791	3R_DroMel_CAF1	12,524,035 – 12,524,126	- - - - - - - - -	7863	12,524,035 – 12,524,126	-	6	119	80.35	-2.08	0.57	0.729323
4792	3R_DroMel_CAF1	12,525,341 – 12,525,450	- - - - - - - - -	7864	12,525,341 – 12,525,450	-	6	120	84.07	-1.57	0.80	0.561587
4793	3R_DroMel_CAF1	12,526,995 – 12,527,089	- - - - - - - - -	7865	12,526,995 – 12,527,089	-	6	109	83.79	-2.24	0.68	0.598579
4794	3R_DroMel_CAF1	12,527,141 – 12,527,250	- - - - - - - - -	7866	12,527,141 – 12,527,250	+	6	118	76.81	-2.08	0.50	0.822084
4794	3R_DroMel_CAF1	12,527,141 – 12,527,250	- - - - - - - - -	7867	12,527,141 – 12,527,250	-	6	118	76.81	-2.72	0.53	0.985274
4795	3R_DroMel_CAF1	12,530,245 – 12,530,343	- - - - - - - - -	7868	12,530,245 – 12,530,343	-	6	114	83.14	-1.69	0.80	0.690379
4796	3R_DroMel_CAF1	12,531,036 – 12,531,139	- - - - - - - - -	7869	12,531,036 – 12,531,139	+	6	120	83.30	-2.58	0.74	0.823839
4796	3R_DroMel_CAF1	12,531,036 – 12,531,139	- - - - - - - - -	7870	12,531,036 – 12,531,139	-	6	120	83.30	-1.75	0.70	0.557531
4797	3R_DroMel_CAF1	12,533,318 – 12,533,431	- - - - - - - - -	7871	12,533,318 – 12,533,431	+	6	120	78.51	-2.18	0.49	0.727485
4798	3R_DroMel_CAF1	12,534,485 – 12,534,603	- - - - - - - - -	7872	12,534,485 – 12,534,603	-	5	118	96.61	-1.32	0.97	0.906722
4799	3R_DroMel_CAF1	12,541,038 – 12,541,148	- - - - - - - - -	7873	12,541,038 – 12,541,148	+	5	117	75.58	-1.44	0.70	0.746789
4800	3R_DroMel_CAF1	12,543,902 – 12,543,998	- - - - - - - - -	7874	12,543,902 – 12,543,998	-	6	102	73.63	-1.75	0.56	0.865969
4801	3R_DroMel_CAF1	12,546,851 – 12,546,975	- - - - - - - - -	7875	12,546,851 – 12,546,941	+	5	91	95.81	-1.27	0.91	0.740818
4801	3R_DroMel_CAF1	12,546,851 – 12,546,975	- - - - - - - - -	7876	12,546,884 – 12,546,975	+	5	91	97.14	-1.69	0.81	0.526785
4802	3R_DroMel_CAF1	12,548,886 – 12,548,983	- - - - - - - - -	7877	12,548,886 – 12,548,983	-	6	112	79.52	-1.69	0.58	0.593693
4803	3R_DroMel_CAF1	12,554,067 – 12,554,172	- - - - - - - - -	7878	12,554,067 – 12,554,172	-	6	115	78.71	-1.68	0.57	0.604078
4804	3R_DroMel_CAF1	12,561,790 – 12,561,907	- - - - - - - - -	7879	12,561,790 – 12,561,907	-	6	120	81.43	-2.21	0.59	0.719207
4805	3R_DroMel_CAF1	12,562,645 – 12,562,748	- - - - - - - - -	7880	12,562,645 – 12,562,748	+	6	103	83.46	-1.92	0.70	0.586718
4806	3R_DroMel_CAF1	12,563,299 – 12,563,406	- - - - - - - - -	7881	12,563,299 – 12,563,406	+	6	120	75.37	-1.90	0.62	0.944242
4806	3R_DroMel_CAF1	12,563,299 – 12,563,406	- - - - - - - - -	7882	12,563,299 – 12,563,406	-	6	120	75.37	-2.61	0.74	0.990900
4807	3R_DroMel_CAF1	12,566,557 – 12,566,674	- - - - - - - - -	7883	12,566,557 – 12,566,674	+	6	120	82.51	-1.93	0.62	0.549651
4808	3R_DroMel_CAF1	12,568,421 – 12,568,513	- - - - - - - - "Flybase=FBgn0020556:bxd:nuclear_untranslated_RNA_gene\|1e-48"	7884	12,568,421 – 12,568,513	+	5	92	92.83	-1.59	0.87	0.935653
4809	3R_DroMel_CAF1	12,568,781 – 12,568,875	- - - - - - - - "Flybase=FBgn0020556:bxd:nuclear_untranslated_RNA_gene\|7e-50"	7885	12,568,781 – 12,568,875	+	4	98	92.71	-1.20	1.04	0.602111
4810	3R_DroMel_CAF1	12,572,114 – 12,572,207	- - - - - - - - "Flybase=FBgn0020556:bxd:nuclear_untranslated_RNA_gene\|3e-49"	7886	12,572,114 – 12,572,207	-	6	95	77.55	-1.62	0.75	0.924743
4811	3R_DroMel_CAF1	12,574,388 – 12,574,518	- - - - - - - - "Flybase=FBgn0020556:bxd:nuclear_untranslated_RNA_gene\|3e-71"	7887	12,574,388 – 12,574,489	+	6	113	81.19	-1.20	0.74	0.535635
4811	3R_DroMel_CAF1	12,574,388 – 12,574,518		7888	12,574,428 – 12,574,518	+	6	109	76.75	-1.40	0.71	0.863590
4812	3R_DroMel_CAF1	12,576,527 – 12,576,631	- - - - - - - - "Flybase=FBgn0020556:bxd:nuclear_untranslated_RNA_gene\|8e-56"	7889	12,576,527 – 12,576,631	+	6	120	71.35	-2.06	0.54	0.972659
4812	3R_DroMel_CAF1	12,576,527 – 12,576,631		7890	12,576,527 – 12,576,631	-	6	120	71.35	-3.09	0.54	0.998655
4813	3R_DroMel_CAF1	12,576,902 – 12,577,006	- - - "knownCDS=Parent=FBtr0083346;Name=CG31275-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31275-RA" - - - - "Flybase=FBgn0020556:bxd:nuclear_untranslated_RNA_gene\|8e-56"	7891	12,576,902 – 12,577,006	+	6	104	77.88	-3.05	0.51	0.987199
4813	3R_DroMel_CAF1	12,576,902 – 12,577,006		7892	12,576,902 – 12,577,006	-	6	104	77.88	-2.18	0.51	0.845907
4814	3R_DroMel_CAF1	12,577,428 – 12,577,527	- - - - - - - - "Flybase=FBgn0020556:bxd:nuclear_untranslated_RNA_gene\|8e-53"	7893	12,577,428 – 12,577,527	+	6	108	83.31	-1.88	0.67	0.535480
4815	3R_DroMel_CAF1	12,580,032 – 12,580,138	- - - - - - - - "Flybase=FBgn0020556:bxd:nuclear_untranslated_RNA_gene\|5e-57"	7894	12,580,032 – 12,580,138	-	6	112	80.18	-1.97	0.63	0.813168
4816	3R_DroMel_CAF1	12,581,016 – 12,581,111	- - - - - - - - "Flybase=FBgn0020556:bxd:nuclear_untranslated_RNA_gene\|2e-50"	7895	12,581,016 – 12,581,111	+	6	117	79.32	-1.64	0.59	0.610093
4817	3R_DroMel_CAF1	12,590,929 – 12,591,035	- - - - - - - - "Flybase=FBgn0020556:bxd:nuclear_untranslated_RNA_gene\|5e-57"	7896	12,590,929 – 12,591,035	-	6	107	78.15	-1.05	0.81	0.705867
4818	3R_DroMel_CAF1	12,594,147 – 12,594,267	- - - - - - - - "Flybase=FBgn0020556:bxd:nuclear_untranslated_RNA_gene\|3e-65"	7897	12,594,147 – 12,594,267	-	5	120	91.42	-2.99	0.76	0.979362
4819	3R_DroMel_CAF1	12,596,795 – 12,596,924	- - - - - - - - "Flybase=FBgn0020556:bxd:nuclear_untranslated_RNA_gene\|1e-70"	7898	12,596,795 – 12,596,898	+	6	119	81.74	-2.73	0.60	0.843245
4819	3R_DroMel_CAF1	12,596,795 – 12,596,924		7899	12,596,821 – 12,596,924	+	6	120	84.10	-2.64	0.73	0.771357
4820	3R_DroMel_CAF1	12,600,771 – 12,600,872	- - - - - - - - -	7900	12,600,771 – 12,600,872	-	4	116	63.88	-2.27	0.62	0.999077
4821	3R_DroMel_CAF1	12,601,960 – 12,602,113	- - - - - - - - -	7901	12,601,960 – 12,602,062	-	6	106	80.26	-1.13	0.74	0.561979
4821	3R_DroMel_CAF1	12,601,960 – 12,602,113	- - - - - - - - -	7902	12,602,023 – 12,602,113	+	6	111	73.16	-1.69	0.57	0.863014
4822	3R_DroMel_CAF1	12,604,525 – 12,604,630	- - - - - - - - -	7903	12,604,525 – 12,604,630	+	6	120	75.58	-2.33	0.35	0.720894
4823	3R_DroMel_CAF1	12,605,823 – 12,605,934	- - - - - - - - -	7904	12,605,823 – 12,605,934	-	6	111	83.71	-1.82	0.74	0.604646
4824	3R_DroMel_CAF1	12,607,278 – 12,607,376	- - - - - - - - -	7905	12,607,278 – 12,607,376	+	6	107	81.97	-1.45	0.84	0.669996
4824	3R_DroMel_CAF1	12,607,278 – 12,607,376	- - - - - - - - -	7906	12,607,278 – 12,607,376	-	6	107	81.97	-1.55	0.85	0.735356
4825	3R_DroMel_CAF1	12,614,850 – 12,615,004	- - "RNAmicro=f:12614850_t:12614963_strand:-_p:0.994015" "knownCDS=Parent=FBtr0083340;Name=Glut3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3853-RA" - - - - -	7907	12,614,850 – 12,614,964	+	6	114	77.08	-3.60	0.68	0.991613
				7908	12,614,850 – 12,614,964	-	6	114	77.08	-2.50	0.67	0.984090
				7909	12,614,889 – 12,615,004	+	6	115	78.72	-2.57	0.72	0.971871
				7910	12,614,889 – 12,615,004	-	6	115	78.72	-1.99	0.62	0.888175
4826	3R_DroMel_CAF1	12,621,506 – 12,621,606	- - - - - - - - -	7911	12,621,506 – 12,621,606	+	4	117	86.94	-2.06	0.75	0.859246
4826	3R_DroMel_CAF1	12,621,506 – 12,621,606	- - - - - - - - -	7912	12,621,506 – 12,621,606	-	4	117	86.94	-3.17	0.85	0.995296
4827	3R_DroMel_CAF1	12,622,779 – 12,622,869	- - - - - - - - -	7913	12,622,779 – 12,622,869	+	6	120	79.96	-1.33	0.76	0.719272
4827	3R_DroMel_CAF1	12,622,779 – 12,622,869	- - - - - - - - -	7914	12,622,779 – 12,622,869	-	6	120	79.96	-1.06	0.72	0.510880
4828	3R_DroMel_CAF1	12,623,155 – 12,623,274	- - - - - - - - -	7915	12,623,155 – 12,623,274	-	4	119	95.24	-1.62	0.89	0.650462
4829	3R_DroMel_CAF1	12,623,787 – 12,623,907	- - - - - - - - -	7916	12,623,787 – 12,623,907	-	3	120	96.11	-1.49	0.98	0.599815
4830	3R_DroMel_CAF1	12,631,755 – 12,631,856	- - - - - - - - -	7917	12,631,755 – 12,631,856	-	6	117	72.88	-2.91	0.38	0.995103
4831	3R_DroMel_CAF1	12,641,715 – 12,641,807	- - - - - - - - -	7918	12,641,715 – 12,641,807	+	6	120	80.16	-1.49	0.61	0.512781
4832	3R_DroMel_CAF1	12,642,228 – 12,642,366	- - - - - - - - -	7919	12,642,228 – 12,642,338	-	6	120	82.65	-2.65	0.63	0.761527
4832	3R_DroMel_CAF1	12,642,228 – 12,642,366	- - - - - - - - -	7920	12,642,263 – 12,642,366	-	6	107	76.15	-1.53	0.57	0.577277
4833	3R_DroMel_CAF1	12,645,435 – 12,645,529	- - - - - - - - -	7921	12,645,435 – 12,645,529	+	5	100	96.07	-2.11	0.92	0.998360
4833	3R_DroMel_CAF1	12,645,435 – 12,645,529	- - - - - - - - -	7922	12,645,435 – 12,645,529	-	5	100	96.07	-1.75	0.85	0.917756
4834	3R_DroMel_CAF1	12,648,662 – 12,648,759	- - - - - - - - -	7923	12,648,662 – 12,648,759	-	6	117	80.65	-2.62	0.50	0.791599
4835	3R_DroMel_CAF1	12,650,090 – 12,650,196	- - - - - - - - -	7924	12,650,090 – 12,650,196	-	5	106	96.23	-2.58	0.97	0.999941
4836	3R_DroMel_CAF1	12,652,175 – 12,652,270	- - - - - - - - -	7925	12,652,175 – 12,652,270	-	6	101	80.67	-2.24	0.66	0.873354
4837	3R_DroMel_CAF1	12,652,358 – 12,652,467	- - - - - - - - -	7926	12,652,358 – 12,652,467	-	6	113	78.03	-1.86	0.58	0.799970
4838	3R_DroMel_CAF1	12,655,468 – 12,655,568	- - - - - - - - -	7927	12,655,468 – 12,655,568	+	6	108	79.12	-4.10	0.60	0.991146
4838	3R_DroMel_CAF1	12,655,468 – 12,655,568	- - - - - - - - -	7928	12,655,468 – 12,655,568	-	6	108	79.12	-4.46	0.62	0.989858
4839	3R_DroMel_CAF1	12,658,644 – 12,658,738	- - - - - - - - -	7929	12,658,644 – 12,658,738	-	5	94	91.63	-3.13	0.73	0.940439
4840	3R_DroMel_CAF1	12,660,298 – 12,660,409	- - - - - - - - -	7930	12,660,298 – 12,660,409	+	6	120	78.89	-1.52	0.61	0.594227
4841	3R_DroMel_CAF1	12,667,441 – 12,667,544	- - - - - - - - -	7931	12,667,441 – 12,667,544	-	5	116	78.68	-2.62	0.50	0.982045
4842	3R_DroMel_CAF1	12,681,981 – 12,682,095	"known=stem_loop ID=Dmel\CG_RFAM_MIR_48002339;Name=dme-mir-iab-4" - "RNAmicro=f:12681981_t:12682100_strand:+_p:0.842360" - - "Noncode=n396,u372,AE003715,iab-4,Drosophila_melanogaster_(fruit_fly)\|1e-60" "miRBase=dme-mir-iab-4\|7e-34" - "Flybase=FBgn0020546:iab-4:nuclear_untranslated_RNA_gene\|1e-61"	7932	12,681,981 – 12,682,095	+	6	120	88.16	-3.31	0.87	0.993459
4842	3R_DroMel_CAF1	12,681,981 – 12,682,095		7933	12,681,981 – 12,682,095	-	6	120	88.16	-3.67	0.89	0.997711
4843	3R_DroMel_CAF1	12,687,038 – 12,687,128	- - - - - - - - -	7934	12,687,038 – 12,687,128	+	5	92	78.08	-2.33	0.37	0.928288
4844	3R_DroMel_CAF1	12,691,884 – 12,691,990	- - - - - - - - -	7935	12,691,884 – 12,691,990	+	6	109	95.39	-1.90	0.83	0.651800
4845	3R_DroMel_CAF1	12,695,063 – 12,695,173	- - - - - - - - -	7936	12,695,063 – 12,695,173	-	6	111	73.11	-1.71	0.53	0.782021
4846	3R_DroMel_CAF1	12,695,891 – 12,695,982	- - - - - - - - -	7937	12,695,891 – 12,695,982	+	6	104	82.52	-1.61	0.70	0.588613
4847	3R_DroMel_CAF1	12,696,658 – 12,696,751	- - - - - - - - -	7938	12,696,658 – 12,696,751	-	5	99	90.51	-1.36	0.85	0.657098
4848	3R_DroMel_CAF1	12,697,237 – 12,697,377	- - - - - - - - -	7939	12,697,237 – 12,697,327	+	6	101	80.34	-1.44	0.72	0.711034
				7940	12,697,258 – 12,697,367	+	6	120	85.40	-1.97	0.86	0.832200
				7941	12,697,287 – 12,697,377	+	6	95	84.33	-1.36	0.89	0.561534
4849	3R_DroMel_CAF1	12,708,063 – 12,708,178	- - - - - - - - -	7942	12,708,063 – 12,708,178	-	5	115	83.12	-1.89	0.62	0.581806
4850	3R_DroMel_CAF1	12,708,331 – 12,708,430	- - - - - - - - -	7943	12,708,331 – 12,708,430	-	6	110	85.26	-1.99	0.88	0.892470
4851	3R_DroMel_CAF1	12,710,635 – 12,710,777	- - - "knownCDS=Parent=FBtr0083364;Name=CG10349-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10349-RA" - - - - -	7944	12,710,635 – 12,710,748	+	6	113	93.92	-1.74	0.90	0.959515
				7945	12,710,635 – 12,710,748	-	6	113	93.92	-1.88	0.85	0.818084
				7946	12,710,673 – 12,710,777	+	6	111	88.21	-1.54	0.88	0.701464
				7947	12,710,673 – 12,710,777	-	6	111	88.21	-1.79	0.90	0.908925
4852	3R_DroMel_CAF1	12,722,759 – 12,722,849	- - - - - - - - -	7948	12,722,759 – 12,722,849	-	6	106	84.83	-2.47	0.73	0.658827
4853	3R_DroMel_CAF1	12,723,119 – 12,723,219	- - - - - - - - -	7949	12,723,119 – 12,723,219	+	6	120	77.99	-1.14	0.67	0.554844
4854	3R_DroMel_CAF1	12,728,528 – 12,728,618	- - - - - - - - -	7950	12,728,528 – 12,728,618	-	5	102	79.96	-1.45	0.73	0.549073
4855	3R_DroMel_CAF1	12,729,068 – 12,729,161	- - - - - - - - -	7951	12,729,068 – 12,729,161	-	6	106	77.66	-2.03	0.48	0.649705
4856	3R_DroMel_CAF1	12,729,710 – 12,729,816	- - - - - - - - -	7952	12,729,710 – 12,729,816	-	4	113	80.79	-2.69	0.67	0.990028
4857	3R_DroMel_CAF1	12,740,716 – 12,740,850	- - "RNAmicro=f:12740716_t:12740824_strand:+_p:0.787389" - - - - - -	7953	12,740,716 – 12,740,817	+	5	109	91.36	-2.69	0.80	0.991307
				7954	12,740,716 – 12,740,817	-	5	109	91.36	-2.51	0.88	0.999270
				7955	12,740,749 – 12,740,850	-	5	109	92.13	-1.97	0.79	0.906217
4858	3R_DroMel_CAF1	12,744,792 – 12,744,912	- - - - - - - - -	7956	12,744,792 – 12,744,889	+	6	103	78.32	-1.46	0.59	0.517422
				7957	12,744,821 – 12,744,912	+	6	101	79.21	-2.28	0.68	0.944743
				7958	12,744,821 – 12,744,912	-	6	101	79.21	-2.49	0.61	0.947738
4859	3R_DroMel_CAF1	12,758,801 – 12,758,942	- - - - - - - - -	7959	12,758,801 – 12,758,902	-	6	120	80.30	-2.38	0.92	0.968448
				7960	12,758,825 – 12,758,942	+	6	120	95.01	-2.18	0.96	0.999628
				7961	12,758,825 – 12,758,942	-	6	120	95.01	-1.91	0.96	0.998734
4860	3R_DroMel_CAF1	12,759,541 – 12,759,642	- - - - - - - - -	7962	12,759,541 – 12,759,642	-	6	102	89.61	-3.30	0.82	0.972319
4861	3R_DroMel_CAF1	12,761,861 – 12,761,951	- - - - - - - - -	7963	12,761,861 – 12,761,951	-	5	91	91.73	-1.73	0.84	0.932304
4862	3R_DroMel_CAF1	12,778,366 – 12,778,473	- - - - - - - - -	7964	12,778,366 – 12,778,473	+	6	110	92.17	-1.74	0.97	0.996263
4862	3R_DroMel_CAF1	12,778,366 – 12,778,473	- - - - - - - - -	7965	12,778,366 – 12,778,473	-	6	110	92.17	-1.48	0.86	0.572965
4863	3R_DroMel_CAF1	12,793,267 – 12,793,363	- - - - - - - - -	7966	12,793,267 – 12,793,363	-	6	106	77.19	-2.15	0.43	0.620780
4864	3R_DroMel_CAF1	12,793,441 – 12,793,542	- - - - - - - - -	7967	12,793,441 – 12,793,542	+	6	110	76.08	-1.70	0.52	0.579864
4865	3R_DroMel_CAF1	12,804,447 – 12,804,558	- - - - - - - - -	7968	12,804,447 – 12,804,558	-	6	113	77.60	-1.36	0.61	0.521787
4866	3R_DroMel_CAF1	12,804,616 – 12,804,772	- - - "knownCDS=Parent=FBtr0083378, FBtr0083379;Name=Ahcy89E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8956-RC, FlyBase+Annotation+IDs:CG8956-RD" - - - - -	7969	12,804,616 – 12,804,736	-	6	120	78.83	-1.53	0.63	0.681397
4866	3R_DroMel_CAF1	12,804,616 – 12,804,772		7970	12,804,656 – 12,804,772	-	6	119	83.25	-1.33	0.82	0.500000
4867	3R_DroMel_CAF1	12,806,360 – 12,806,464	- - - - - - - - -	7971	12,806,360 – 12,806,464	+	6	118	76.99	-1.54	0.60	0.686030
4868	3R_DroMel_CAF1	12,815,322 – 12,815,421	- - - "knownCDS=Parent=FBtr0083367;Name=MESK4-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31447-RA" - - - - -	7972	12,815,322 – 12,815,421	-	6	120	82.45	-1.49	0.75	0.600982
4869	3R_DroMel_CAF1	12,816,401 – 12,816,521	- - - "knownCDS=Parent=FBtr0083376;Name=CG3678-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3678-RA" - - - - -	7973	12,816,401 – 12,816,521	+	5	120	94.58	-1.09	0.93	0.573905
4870	3R_DroMel_CAF1	12,816,601 – 12,816,801	- - - "knownCDS=Parent=FBtr0083376;Name=CG3678-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3678-RA" - - - - -	7974	12,816,601 – 12,816,721	-	5	120	92.75	-1.40	0.87	0.808941
				7975	12,816,641 – 12,816,761	-	5	120	95.00	-1.69	0.97	0.995805
				7976	12,816,681 – 12,816,801	-	5	120	92.83	-2.04	0.94	0.999096
4871	3R_DroMel_CAF1	12,817,143 – 12,817,263	- - - "knownCDS=Parent=FBtr0083376;Name=CG3678-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3678-RA" - - - - -	7977	12,817,143 – 12,817,263	-	4	120	98.19	-1.79	1.00	0.751650
4872	3R_DroMel_CAF1	12,817,343 – 12,817,462	- - - - - - - - -	7978	12,817,343 – 12,817,462	+	4	120	88.73	-1.70	0.72	0.632302
4873	3R_DroMel_CAF1	12,818,234 – 12,818,354	- - - - - - - - -	7979	12,818,234 – 12,818,354	-	4	120	92.22	-1.65	0.86	0.752293
4874	3R_DroMel_CAF1	12,819,243 – 12,819,363	- - - "knownCDS=Parent=FBtr0083368;Name=CG31274-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31274-RA" - - - - -	7980	12,819,243 – 12,819,363	-	4	120	94.17	-1.43	0.92	0.606720
4875	3R_DroMel_CAF1	12,819,883 – 12,820,077	- - - - - - - - -	7981	12,819,883 – 12,819,997	+	3	114	95.91	-1.87	0.88	0.574780
				7982	12,819,923 – 12,820,037	+	3	114	92.40	-2.78	0.92	0.973890
				7983	12,819,923 – 12,820,037	-	3	114	92.40	-2.03	0.82	0.535045
				7984	12,819,961 – 12,820,077	+	3	116	91.38	-1.92	0.87	0.648195
4876	3R_DroMel_CAF1	12,830,397 – 12,830,517	- - - "knownCDS=Parent=FBtr0083371;Name=CG8913-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8913-RA" - - - - -	7985	12,830,397 – 12,830,517	+	5	120	90.00	-1.57	0.79	0.670152
4876	3R_DroMel_CAF1	12,830,397 – 12,830,517		7986	12,830,397 – 12,830,517	-	5	120	90.00	-1.48	0.87	0.810911
4877	3R_DroMel_CAF1	12,833,182 – 12,833,283	- - - - - - - - -	7987	12,833,182 – 12,833,283	+	5	108	92.87	-1.90	0.74	0.590288
4878	3R_DroMel_CAF1	12,837,286 – 12,837,388	- - - "knownCDS=Parent=FBtr0083372;Name=CG8907-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8907-RA" - - - - -	7988	12,837,286 – 12,837,388	+	6	108	83.66	-2.03	0.72	0.643833
4879	3R_DroMel_CAF1	12,841,495 – 12,841,587	- - - - - - - - -	7989	12,841,495 – 12,841,587	-	6	103	88.01	-1.96	0.80	0.509403
4880	3R_DroMel_CAF1	12,841,709 – 12,841,815	- - - - - - - - -	7990	12,841,709 – 12,841,815	-	4	108	76.70	-2.88	0.58	0.997508
4881	3R_DroMel_CAF1	12,843,546 – 12,843,644	- - - - - - - - -	7991	12,843,546 – 12,843,644	-	6	102	75.41	-1.82	0.57	0.867809
4882	3R_DroMel_CAF1	12,844,146 – 12,844,239	- - - - - - - - -	7992	12,844,146 – 12,844,239	+	5	97	92.36	-1.65	0.87	0.945848
4882	3R_DroMel_CAF1	12,844,146 – 12,844,239	- - - - - - - - -	7993	12,844,146 – 12,844,239	-	5	97	92.36	-1.25	0.84	0.515622
4883	3R_DroMel_CAF1	12,844,538 – 12,844,643	- - - - - - - - -	7994	12,844,538 – 12,844,643	-	5	109	89.80	-1.41	0.78	0.511739
4884	3R_DroMel_CAF1	12,847,167 – 12,847,277	- - - - - - - - -	7995	12,847,167 – 12,847,277	+	5	120	70.57	-1.94	0.48	0.916166
4885	3R_DroMel_CAF1	12,850,477 – 12,850,569	- - - - - - - - -	7996	12,850,477 – 12,850,569	-	5	108	80.69	-2.05	0.52	0.635451
4886	3R_DroMel_CAF1	12,852,886 – 12,852,976	- - - - - - - - -	7997	12,852,886 – 12,852,976	+	6	90	81.56	-1.32	0.84	0.620480
4887	3R_DroMel_CAF1	12,853,216 – 12,853,325	- - - - - - - - -	7998	12,853,216 – 12,853,325	+	6	114	81.01	-1.40	0.67	0.555411
4888	3R_DroMel_CAF1	12,854,677 – 12,854,768	- - - "knownCDS=Parent=FBtr0083389;Name=CG5225-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5225-RA" - - - - -	7999	12,854,677 – 12,854,768	+	6	91	78.10	-2.11	0.61	0.929722
4889	3R_DroMel_CAF1	12,855,492 – 12,855,676	- - - "knownCDS=Parent=FBtr0083389;Name=CG5225-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5225-RA" - - - - -	8000	12,855,492 – 12,855,612	+	3	120	93.89	-2.14	0.88	0.765651
				8001	12,855,492 – 12,855,612	-	3	120	93.89	-1.82	0.93	0.734762
				8002	12,855,532 – 12,855,651	+	3	119	94.12	-3.60	0.90	0.977620
				8003	12,855,532 – 12,855,651	-	3	119	94.12	-1.83	0.91	0.682411
				8004	12,855,572 – 12,855,676	+	3	104	92.63	-3.07	0.80	0.851249
				8005	12,855,572 – 12,855,676	-	3	104	92.63	-2.46	0.79	0.655068
4890	3R_DroMel_CAF1	12,856,215 – 12,856,325	- - - "knownCDS=Parent=FBtr0083389;Name=CG5225-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5225-RA" - - - - -	8006	12,856,215 – 12,856,325	-	6	120	67.41	-1.91	0.29	0.548341
4891	3R_DroMel_CAF1	12,857,865 – 12,858,048	- - - "knownCDS=Parent=FBtr0083390;Name=CG31268-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31268-RA" - - - - -	8007	12,857,865 – 12,857,975	-	6	111	77.16	-2.31	0.45	0.842610
				8008	12,857,905 – 12,858,015	+	6	111	74.32	-2.01	0.52	0.914696
				8009	12,857,936 – 12,858,048	+	6	114	75.56	-2.08	0.45	0.783811
4892	3R_DroMel_CAF1	12,865,728 – 12,865,875	- - - "knownCDS=Parent=FBtr0083429;Name=CG18213-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18213-RA" - - - - -	8010	12,865,728 – 12,865,847	-	6	119	80.21	-1.85	0.64	0.782056
4892	3R_DroMel_CAF1	12,865,728 – 12,865,875		8011	12,865,768 – 12,865,875	-	6	109	76.43	-1.40	0.60	0.573943
4893	3R_DroMel_CAF1	12,866,684 – 12,866,804	- - - - - - - - -	8012	12,866,684 – 12,866,804	+	4	120	90.00	-1.38	0.82	0.512843
4894	3R_DroMel_CAF1	12,867,084 – 12,867,204	- - - "knownCDS=Parent=FBtr0083391;Name=CG5220-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5220-RA" - - - - -	8013	12,867,084 – 12,867,204	-	4	120	94.86	-1.56	0.91	0.682913
4895	3R_DroMel_CAF1	12,868,789 – 12,868,889	- - - - - - - - -	8014	12,868,789 – 12,868,889	+	5	106	83.40	-1.77	0.66	0.588420
4896	3R_DroMel_CAF1	12,869,269 – 12,869,364	- - - - - - - - -	8015	12,869,269 – 12,869,364	+	5	107	90.81	-1.97	0.85	0.977024
4896	3R_DroMel_CAF1	12,869,269 – 12,869,364	- - - - - - - - -	8016	12,869,269 – 12,869,364	-	5	107	90.81	-2.95	0.89	0.999856
4897	3R_DroMel_CAF1	12,870,784 – 12,870,976	- - - "knownCDS=Parent=FBtr0083392;Name=CG5208-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5208-RA" - - - - -	8017	12,870,784 – 12,870,880	-	6	102	86.46	-2.71	0.79	0.822775
				8018	12,870,880 – 12,870,976	+	6	99	81.21	-1.53	0.65	0.580869
				8019	12,870,880 – 12,870,976	-	6	99	81.21	-1.52	0.65	0.557118
4898	3R_DroMel_CAF1	12,876,459 – 12,876,563	- - - - - - - - -	8020	12,876,459 – 12,876,563	-	5	110	95.82	-1.43	0.91	0.899686
4899	3R_DroMel_CAF1	12,878,918 – 12,879,028	- - - - - - - - -	8021	12,878,918 – 12,879,028	+	5	116	92.57	-1.77	0.83	0.921507
4900	3R_DroMel_CAF1	12,880,437 – 12,880,555	- - - - - - - - -	8022	12,880,437 – 12,880,555	-	5	119	95.09	-1.41	0.99	0.972057
4901	3R_DroMel_CAF1	12,882,055 – 12,882,155	- - - - - - - - -	8023	12,882,055 – 12,882,155	-	6	114	79.96	-1.76	0.62	0.717169
4902	3R_DroMel_CAF1	12,882,505 – 12,882,604	- - - - - - - - -	8024	12,882,505 – 12,882,604	+	3	100	80.78	-1.06	0.98	0.989579
4903	3R_DroMel_CAF1	12,883,643 – 12,883,752	- - - "knownCDS=Parent=FBtr0083393, FBtr0083394, FBtr0100160;Name=Dad-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5201-RA, FlyBase+Annotation+IDs:CG5201-RB, FlyBase+Annotation+IDs:CG5201-RC" - - - - -	8025	12,883,643 – 12,883,752	+	6	115	66.42	-1.73	0.37	0.627660
4903	3R_DroMel_CAF1	12,883,643 – 12,883,752		8026	12,883,643 – 12,883,752	-	6	115	66.42	-1.69	0.50	0.881414
4904	3R_DroMel_CAF1	12,885,117 – 12,885,209	- - - - - - - - -	8027	12,885,117 – 12,885,209	-	5	103	88.87	-1.73	0.80	0.825161
4905	3R_DroMel_CAF1	12,886,339 – 12,886,486	- - - - - - - - -	8028	12,886,339 – 12,886,446	+	5	119	94.28	-1.27	0.91	0.798850
4905	3R_DroMel_CAF1	12,886,339 – 12,886,486	- - - - - - - - -	8029	12,886,379 – 12,886,486	+	6	119	85.95	-2.85	0.69	0.519154
4906	3R_DroMel_CAF1	12,887,494 – 12,887,595	- - - "knownCDS=Parent=FBtr0083427;Name=CG31263-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31263-RA" - - - - -	8030	12,887,494 – 12,887,595	+	5	116	78.56	-1.72	0.61	0.625881
4907	3R_DroMel_CAF1	12,887,749 – 12,887,854	- - - "knownCDS=Parent=FBtr0083427;Name=CG31263-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31263-RA" - - - - -	8031	12,887,749 – 12,887,854	+	5	105	89.29	-1.37	0.96	0.848544
4907	3R_DroMel_CAF1	12,887,749 – 12,887,854		8032	12,887,749 – 12,887,854	-	5	105	89.29	-1.30	0.95	0.742560
4908	3R_DroMel_CAF1	12,888,705 – 12,888,799	- - - - - - - - -	8033	12,888,705 – 12,888,799	+	5	103	79.28	-1.92	0.72	0.903276
4909	3R_DroMel_CAF1	12,889,515 – 12,889,619	- - - - - - - - -	8034	12,889,515 – 12,889,619	-	5	119	85.86	-2.00	0.81	0.909686
4910	3R_DroMel_CAF1	12,892,822 – 12,892,916	- - - - - - - - -	8035	12,892,822 – 12,892,916	-	6	94	95.32	-2.43	0.86	0.982096
4911	3R_DroMel_CAF1	12,893,086 – 12,893,183	- - - - - - - - -	8036	12,893,086 – 12,893,183	+	5	97	99.59	-1.24	0.97	0.527379
4912	3R_DroMel_CAF1	12,893,559 – 12,893,700	- - - - - - - - -	8037	12,893,559 – 12,893,662	+	4	120	80.54	-2.72	0.70	0.994204
				8038	12,893,559 – 12,893,662	-	4	120	80.54	-2.66	0.52	0.855506
				8039	12,893,599 – 12,893,700	-	4	118	79.57	-2.33	0.59	0.918440
4913	3R_DroMel_CAF1	12,894,810 – 12,894,904	- - - - - - - - -	8040	12,894,810 – 12,894,904	+	6	102	79.99	-2.52	0.65	0.939172
4913	3R_DroMel_CAF1	12,894,810 – 12,894,904	- - - - - - - - -	8041	12,894,810 – 12,894,904	-	6	102	79.99	-2.38	0.52	0.777789
4914	3R_DroMel_CAF1	12,895,936 – 12,896,026	- - - - - - - - -	8042	12,895,936 – 12,896,026	+	6	97	81.71	-1.53	0.82	0.723056
4915	3R_DroMel_CAF1	12,906,661 – 12,906,777	- - - - - - - - -	8043	12,906,661 – 12,906,777	-	3	120	75.14	-2.11	0.54	0.796665
4916	3R_DroMel_CAF1	12,906,975 – 12,907,158	- - - - - - - - -	8044	12,906,975 – 12,907,078	+	3	120	72.94	-3.94	0.42	0.956059
				8045	12,907,015 – 12,907,118	+	3	120	70.12	-3.56	0.55	0.999979
				8046	12,907,015 – 12,907,118	-	3	120	70.12	-3.91	0.63	0.999999
				8047	12,907,044 – 12,907,158	+	3	120	79.82	-2.08	0.77	0.953766
				8048	12,907,044 – 12,907,158	-	3	120	79.82	-2.99	0.78	0.997750
4917	3R_DroMel_CAF1	12,907,278 – 12,907,392	- - - - - - - - -	8049	12,907,278 – 12,907,392	+	3	114	78.40	-2.01	0.56	0.510664
4918	3R_DroMel_CAF1	12,909,935 – 12,910,025	- - - "knownCDS=Parent=FBtr0083398;Name=kuk-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5175-RB" - - - - -	8050	12,909,935 – 12,910,025	+	3	120	73.33	-1.31	0.65	0.575256
4918	3R_DroMel_CAF1	12,909,935 – 12,910,025		8051	12,909,935 – 12,910,025	-	3	120	73.33	-2.12	0.77	0.999432
4919	3R_DroMel_CAF1	12,910,291 – 12,910,390	- - - - - - - - -	8052	12,910,291 – 12,910,390	+	3	120	78.25	-2.40	0.63	0.976557
4920	3R_DroMel_CAF1	12,911,196 – 12,911,353	- - - - - - - - -	8053	12,911,196 – 12,911,313	+	3	120	90.22	-2.56	0.71	0.584866
				8054	12,911,196 – 12,911,313	-	3	120	90.22	-2.40	0.81	0.772462
				8055	12,911,236 – 12,911,353	-	3	120	93.30	-1.80	0.88	0.552624
4921	3R_DroMel_CAF1	12,912,325 – 12,912,445	- - - "knownCDS=Parent=FBtr0083399;Name=CG5169-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5169-RA" - - - - -	8056	12,912,325 – 12,912,445	+	6	120	90.22	-1.45	0.86	0.521872
4922	3R_DroMel_CAF1	12,913,009 – 12,913,129	- - - "knownCDS=Parent=FBtr0083399;Name=CG5169-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5169-RA" - - - - -	8057	12,913,009 – 12,913,129	-	4	120	97.36	-2.23	0.96	0.933702
4923	3R_DroMel_CAF1	12,914,791 – 12,915,022	- - - "knownCDS=Parent=FBtr0083400;Name=CG5148-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5148-RA" - - - - -	8058	12,914,791 – 12,914,911	-	6	120	82.67	-1.89	0.68	0.630625
4923	3R_DroMel_CAF1	12,914,791 – 12,915,022		8059	12,914,911 – 12,915,022	+	6	120	79.59	-1.76	0.60	0.684826
4924	3R_DroMel_CAF1	12,917,682 – 12,917,775	- - - - - - - - -	8060	12,917,682 – 12,917,775	-	6	97	92.23	-2.13	0.84	0.858418
4925	3R_DroMel_CAF1	12,921,356 – 12,921,448	- - - - - - - - -	8061	12,921,356 – 12,921,448	-	6	110	72.43	-2.26	0.26	0.617093
4926	3R_DroMel_CAF1	12,950,300 – 12,950,420	- - - - - - - - -	8062	12,950,300 – 12,950,420	+	5	120	73.83	-1.72	0.52	0.630588
4927	3R_DroMel_CAF1	12,950,907 – 12,950,997	- - - - - - - - -	8063	12,950,907 – 12,950,997	-	6	91	81.10	-1.59	0.64	0.591397
4928	3R_DroMel_CAF1	12,952,199 – 12,952,313	- - - "knownCDS=Parent=FBtr0083418;Name=CG17477-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17477-RA" - - - - -	8064	12,952,199 – 12,952,313	+	6	114	73.45	-2.29	0.48	0.970745
4929	3R_DroMel_CAF1	12,955,213 – 12,955,318	- - - "knownCDS=Parent=FBtr0083417;Name=CG17475-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17475-RA" - - - - -	8065	12,955,213 – 12,955,318	+	6	108	78.14	-1.82	0.59	0.798469
4930	3R_DroMel_CAF1	12,965,114 – 12,965,234	- - - "knownCDS=Parent=FBtr0083407;Name=CG5265-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5265-RA" - - - - -	8066	12,965,114 – 12,965,234	-	5	120	93.17	-1.13	0.92	0.601584
4931	3R_DroMel_CAF1	12,965,314 – 12,965,434	- - - "knownCDS=Parent=FBtr0083407;Name=CG5265-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5265-RA" - - - - -	8067	12,965,314 – 12,965,434	+	5	120	94.00	-1.41	0.82	0.571238
4932	3R_DroMel_CAF1	12,965,774 – 12,966,094	- - - "knownCDS=Parent=FBtr0083407;Name=CG5265-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5265-RA" - - - - -	8068	12,965,774 – 12,965,894	+	5	120	93.33	-2.00	0.93	0.998551
				8069	12,965,774 – 12,965,894	-	5	120	93.33	-1.71	0.88	0.975098
				8070	12,965,814 – 12,965,934	-	5	120	93.83	-1.36	0.93	0.904938
				8071	12,965,934 – 12,966,054	+	5	120	91.50	-1.34	0.83	0.590314
				8072	12,965,974 – 12,966,094	+	5	120	92.25	-1.96	0.87	0.989356
4933	3R_DroMel_CAF1	12,970,554 – 12,970,699	- - - - - - - - -	8073	12,970,554 – 12,970,666	+	4	120	74.96	-1.80	0.58	0.714017
4933	3R_DroMel_CAF1	12,970,554 – 12,970,699	- - - - - - - - -	8074	12,970,594 – 12,970,699	-	4	113	80.21	-1.78	0.67	0.716085
4934	3R_DroMel_CAF1	12,979,093 – 12,979,202	- - - - - - - - -	8075	12,979,093 – 12,979,202	+	6	118	70.75	-3.04	0.47	0.998766
4934	3R_DroMel_CAF1	12,979,093 – 12,979,202	- - - - - - - - -	8076	12,979,093 – 12,979,202	-	6	118	70.75	-3.19	0.43	0.999006
4935	3R_DroMel_CAF1	12,979,245 – 12,979,341	- - - "knownCDS=Parent=FBtr0083413;Name=CG4090-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4090-RA" - - - - -	8077	12,979,245 – 12,979,341	-	6	99	80.13	-1.76	0.57	0.529837
4936	3R_DroMel_CAF1	12,986,230 – 12,986,326	- - - - - - - - -	8078	12,986,230 – 12,986,326	+	6	104	83.28	-2.13	0.70	0.681310
4937	3R_DroMel_CAF1	12,986,354 – 12,986,482	- - - - - - - - -	8079	12,986,354 – 12,986,465	-	6	120	77.91	-1.72	0.56	0.629528
4937	3R_DroMel_CAF1	12,986,354 – 12,986,482	- - - - - - - - -	8080	12,986,390 – 12,986,482	-	6	120	75.24	-1.07	0.69	0.643519
4938	3R_DroMel_CAF1	12,986,700 – 12,986,794	- - - - - - - - -	8081	12,986,700 – 12,986,794	+	6	94	90.28	-1.64	0.90	0.883593
4939	3R_DroMel_CAF1	12,989,494 – 12,989,608	- - - - - - - - -	8082	12,989,494 – 12,989,608	-	6	120	71.89	-2.29	0.64	0.992805
4940	3R_DroMel_CAF1	12,995,615 – 12,995,747	- - - "knownCDS=texon3692;Parent=CG_NCBI_GNO_32362000, CG_DGIL_SNO_28365702, CG_BATZ_CON_47009954" - - - - -	8083	12,995,615 – 12,995,707	-	6	110	86.80	-1.34	0.93	0.702421
				8084	12,995,651 – 12,995,747	+	6	117	77.31	-1.30	0.67	0.717868
				8085	12,995,651 – 12,995,747	-	6	117	77.31	-1.06	0.68	0.520778
4941	3R_DroMel_CAF1	12,997,143 – 12,997,238	- - - - - - - - -	8086	12,997,143 – 12,997,238	+	3	95	79.36	-0.31	0.91	0.608398
4942	3R_DroMel_CAF1	13,008,327 – 13,008,421	- - - - - - - - -	8087	13,008,327 – 13,008,421	+	6	111	80.45	-1.73	0.76	0.840643
4942	3R_DroMel_CAF1	13,008,327 – 13,008,421	- - - - - - - - -	8088	13,008,327 – 13,008,421	-	6	111	80.45	-1.90	0.77	0.884355
4943	3R_DroMel_CAF1	13,010,182 – 13,010,279	- - - - - - - - -	8089	13,010,182 – 13,010,279	+	6	115	75.90	-1.29	0.62	0.539150
4944	3R_DroMel_CAF1	13,014,092 – 13,014,203	- - - - - - - - -	8090	13,014,092 – 13,014,203	+	5	111	93.78	-2.82	0.88	0.999767
4944	3R_DroMel_CAF1	13,014,092 – 13,014,203	- - - - - - - - -	8091	13,014,092 – 13,014,203	-	5	111	93.78	-3.24	0.85	0.999593
4945	3R_DroMel_CAF1	13,015,847 – 13,015,973	- - - - - - - - -	8092	13,015,847 – 13,015,937	-	6	102	80.96	-2.12	0.58	0.716110
4945	3R_DroMel_CAF1	13,015,847 – 13,015,973	- - - - - - - - -	8093	13,015,875 – 13,015,973	-	6	107	76.41	-1.61	0.61	0.805660
4946	3R_DroMel_CAF1	13,016,079 – 13,016,169	- - - - - - - - -	8094	13,016,079 – 13,016,169	-	5	90	90.89	-2.02	0.89	0.994944
4947	3R_DroMel_CAF1	13,016,372 – 13,016,462	- - - - - - - - -	8095	13,016,372 – 13,016,462	+	5	95	81.60	-2.40	0.60	0.914648
4947	3R_DroMel_CAF1	13,016,372 – 13,016,462	- - - - - - - - -	8096	13,016,372 – 13,016,462	-	5	95	81.60	-1.58	0.74	0.617374
4948	3R_DroMel_CAF1	13,017,245 – 13,017,340	- - - - - - - - -	8097	13,017,245 – 13,017,340	-	6	95	93.25	-1.31	0.92	0.838307
4949	3R_DroMel_CAF1	13,017,573 – 13,017,665	- - - - - - - - -	8098	13,017,573 – 13,017,665	+	5	92	91.74	-1.78	0.78	0.787713
4950	3R_DroMel_CAF1	13,018,653 – 13,018,748	- - - - - - - - -	8099	13,018,653 – 13,018,748	+	4	104	81.48	-2.09	0.55	0.547777
4951	3R_DroMel_CAF1	13,022,209 – 13,022,441	- - - - - - - - -	8100	13,022,209 – 13,022,312	+	5	104	86.13	-1.54	0.76	0.546389
				8101	13,022,274 – 13,022,388	+	4	114	88.01	-2.43	0.81	0.961911
				8102	13,022,312 – 13,022,428	+	5	116	88.65	-2.68	0.69	0.850919
				8103	13,022,312 – 13,022,428	-	5	116	88.65	-2.17	0.69	0.642606
				8104	13,022,348 – 13,022,441	-	5	109	80.67	-2.39	0.64	0.953493
4952	3R_DroMel_CAF1	13,029,644 – 13,029,739	- - - - - - - - -	8105	13,029,644 – 13,029,739	-	6	120	79.15	-2.63	0.54	0.936257
4953	3R_DroMel_CAF1	13,032,493 – 13,032,586	- - - - - - - - -	8106	13,032,493 – 13,032,586	+	3	93	88.89	-2.07	0.86	0.766537
4954	3R_DroMel_CAF1	13,033,457 – 13,033,559	- - - - - - - - -	8107	13,033,457 – 13,033,559	-	6	117	77.40	-2.36	0.58	0.963748
4955	3R_DroMel_CAF1	13,036,130 – 13,036,258	- - - - - - - - -	8108	13,036,130 – 13,036,230	+	5	107	78.57	-1.90	0.55	0.696983
4955	3R_DroMel_CAF1	13,036,130 – 13,036,258	- - - - - - - - -	8109	13,036,162 – 13,036,258	+	4	100	82.98	-2.21	0.62	0.823997
4956	3R_DroMel_CAF1	13,037,687 – 13,037,797	- - - - - - - - -	8110	13,037,687 – 13,037,797	+	6	112	83.08	-1.68	0.68	0.532276
4957	3R_DroMel_CAF1	13,040,485 – 13,040,578	- - - - - - - - -	8111	13,040,485 – 13,040,578	-	4	93	85.84	-1.57	0.67	0.538622
4958	3R_DroMel_CAF1	13,043,390 – 13,043,550	- - - "knownCDS=Parent=FBtr0083412;Name=CG31262-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31262-RA" - - - - -	8112	13,043,390 – 13,043,510	-	5	120	93.58	-1.49	0.89	0.916688
4958	3R_DroMel_CAF1	13,043,390 – 13,043,550		8113	13,043,430 – 13,043,550	-	5	120	92.75	-2.69	0.93	0.999943
4959	3R_DroMel_CAF1	13,046,143 – 13,046,255	- - - - - - - - -	8114	13,046,143 – 13,046,255	+	5	112	99.11	-2.01	0.99	0.995879
4959	3R_DroMel_CAF1	13,046,143 – 13,046,255	- - - - - - - - -	8115	13,046,143 – 13,046,255	-	5	112	99.11	-1.45	0.99	0.883351
4960	3R_DroMel_CAF1	13,047,555 – 13,047,645	- - - - - - - - -	8116	13,047,555 – 13,047,645	-	5	91	81.46	-2.30	0.40	0.580139
4961	3R_DroMel_CAF1	13,055,268 – 13,055,409	- - - - - - - - -	8117	13,055,268 – 13,055,372	+	4	120	80.06	-1.95	0.63	0.777003
				8118	13,055,268 – 13,055,372	-	4	120	80.06	-2.71	0.52	0.881269
				8119	13,055,296 – 13,055,409	+	5	120	82.71	-1.88	0.61	0.591251
				8120	13,055,296 – 13,055,409	-	5	120	82.71	-2.31	0.55	0.726945
4962	3R_DroMel_CAF1	13,056,507 – 13,056,608	- - - - - - - - -	8121	13,056,507 – 13,056,608	+	6	111	76.90	-1.36	0.61	0.565191
4962	3R_DroMel_CAF1	13,056,507 – 13,056,608	- - - - - - - - -	8122	13,056,507 – 13,056,608	-	6	111	76.90	-2.31	0.70	0.980812
4963	3R_DroMel_CAF1	13,056,709 – 13,056,808	- - - - - - - - -	8123	13,056,709 – 13,056,808	-	5	120	83.24	-1.85	0.60	0.508562
4964	3R_DroMel_CAF1	13,063,193 – 13,063,310	- - - - - - - - -	8124	13,063,193 – 13,063,285	-	5	99	92.39	-1.39	0.97	0.956927
4964	3R_DroMel_CAF1	13,063,193 – 13,063,310	- - - - - - - - -	8125	13,063,212 – 13,063,310	+	5	115	84.73	-2.68	0.76	0.982744
4965	3R_DroMel_CAF1	13,063,689 – 13,063,797	- - - - - - - - -	8126	13,063,689 – 13,063,797	-	3	108	95.68	-1.91	0.90	0.659604
4966	3R_DroMel_CAF1	13,067,022 – 13,067,152	- - - - - - - - -	8127	13,067,022 – 13,067,120	+	5	116	69.36	-1.95	0.43	0.898870
4966	3R_DroMel_CAF1	13,067,022 – 13,067,152	- - - - - - - - -	8128	13,067,053 – 13,067,152	+	4	99	83.33	-2.44	0.67	0.940614
4967	3R_DroMel_CAF1	13,078,241 – 13,078,341	- - - - - - - - -	8129	13,078,241 – 13,078,341	+	5	100	72.97	-2.00	0.17	0.939726
4968	3R_DroMel_CAF1	13,078,402 – 13,078,500	- - - - - - - - -	8130	13,078,402 – 13,078,500	-	4	104	94.06	-1.94	0.85	0.809544
4969	3R_DroMel_CAF1	13,083,019 – 13,083,118	- - - - - - - - -	8131	13,083,019 – 13,083,118	+	6	100	81.38	-2.34	0.53	0.613777
4970	3R_DroMel_CAF1	13,085,928 – 13,086,025	- - - - - - - - -	8132	13,085,928 – 13,086,025	-	6	99	81.57	-1.66	0.64	0.581497
4971	3R_DroMel_CAF1	13,089,064 – 13,089,165	- - - - - - - - -	8133	13,089,064 – 13,089,165	-	4	107	83.00	-2.37	0.77	0.969048
4972	3R_DroMel_CAF1	13,091,610 – 13,091,700	- - - - - - - - -	8134	13,091,610 – 13,091,700	-	3	108	68.85	-1.26	0.69	0.908276
4973	3R_DroMel_CAF1	13,092,524 – 13,092,636	- - - - - - - - -	8135	13,092,524 – 13,092,636	-	3	117	83.28	-2.26	0.67	0.785719
4974	3R_DroMel_CAF1	13,092,675 – 13,092,781	- - - - - - - - -	8136	13,092,675 – 13,092,781	-	5	111	87.74	-2.58	0.71	0.900458
4975	3R_DroMel_CAF1	13,096,473 – 13,096,565	- - - - - - - - -	8137	13,096,473 – 13,096,565	+	6	103	78.06	-1.79	0.63	0.864885
4976	3R_DroMel_CAF1	13,099,955 – 13,100,050	- - - - - - - - -	8138	13,099,955 – 13,100,050	-	6	98	80.81	-1.39	0.65	0.514036
4977	3R_DroMel_CAF1	13,105,518 – 13,105,637	- - - - - - - - -	8139	13,105,518 – 13,105,616	+	6	116	77.24	-1.71	0.54	0.582674
4977	3R_DroMel_CAF1	13,105,518 – 13,105,637	- - - - - - - - -	8140	13,105,539 – 13,105,637	-	6	106	78.55	-1.83	0.51	0.500000
4978	3R_DroMel_CAF1	13,105,685 – 13,105,776	- - - - - - - - -	8141	13,105,685 – 13,105,776	-	6	104	78.05	-2.10	0.57	0.885032
4979	3R_DroMel_CAF1	13,106,481 – 13,106,581	- - - - - - - - -	8142	13,106,481 – 13,106,581	+	5	102	95.04	-1.18	0.88	0.530364
4980	3R_DroMel_CAF1	13,107,247 – 13,107,340	- - - - - - - - -	8143	13,107,247 – 13,107,340	+	5	102	92.96	-1.81	0.86	0.970013
4981	3R_DroMel_CAF1	13,114,806 – 13,114,898	- - - - - - - - -	8144	13,114,806 – 13,114,898	+	6	101	67.28	-2.78	0.35	0.994112
4981	3R_DroMel_CAF1	13,114,806 – 13,114,898	- - - - - - - - -	8145	13,114,806 – 13,114,898	-	6	101	67.28	-2.37	0.38	0.980749
4982	3R_DroMel_CAF1	13,116,426 – 13,116,555	- - - - - - - - -	8146	13,116,426 – 13,116,522	+	5	100	85.83	-3.30	0.84	0.999162
				8147	13,116,426 – 13,116,522	-	5	100	85.83	-2.69	0.78	0.987544
				8148	13,116,462 – 13,116,555	+	6	93	79.45	-1.96	0.55	0.661813
4983	3R_DroMel_CAF1	13,116,803 – 13,116,905	- - - - - - - - -	8149	13,116,803 – 13,116,905	+	6	119	83.06	-2.61	0.64	0.718625
4984	3R_DroMel_CAF1	13,117,996 – 13,118,099	- - - - - - - - -	8150	13,117,996 – 13,118,099	+	6	120	81.68	-2.58	0.48	0.545104
4985	3R_DroMel_CAF1	13,118,135 – 13,118,243	- - - - - - - - -	8151	13,118,135 – 13,118,243	+	6	113	76.11	-2.84	0.47	0.989534
4985	3R_DroMel_CAF1	13,118,135 – 13,118,243	- - - - - - - - -	8152	13,118,135 – 13,118,243	-	6	113	76.11	-2.66	0.57	0.990257
4986	3R_DroMel_CAF1	13,120,212 – 13,120,310	- - - - - - - - -	8153	13,120,212 – 13,120,310	-	6	115	78.76	-1.50	0.63	0.641704
4987	3R_DroMel_CAF1	13,130,596 – 13,130,716	- - - - - - - - -	8154	13,130,596 – 13,130,689	-	5	98	82.93	-3.21	0.78	0.997477
4987	3R_DroMel_CAF1	13,130,596 – 13,130,716	- - - - - - - - -	8155	13,130,619 – 13,130,716	-	5	115	66.73	-2.04	0.51	0.967473
4988	3R_DroMel_CAF1	13,136,853 – 13,137,048	- - - - - - - - -	8156	13,136,853 – 13,136,947	+	6	113	82.13	-1.47	0.80	0.649325
				8157	13,136,853 – 13,136,947	-	6	113	82.13	-1.39	0.70	0.523531
				8158	13,136,947 – 13,137,048	-	4	102	79.62	-1.95	0.90	0.971719
4989	3R_DroMel_CAF1	13,143,824 – 13,143,916	- - - - - - - - -	8159	13,143,824 – 13,143,916	-	5	100	91.81	-1.49	0.83	0.778463
4990	3R_DroMel_CAF1	13,147,697 – 13,147,803	- - - - - - - - -	8160	13,147,697 – 13,147,790	-	6	93	92.40	-2.65	0.85	0.969064
4990	3R_DroMel_CAF1	13,147,697 – 13,147,803	- - - - - - - - -	8161	13,147,711 – 13,147,803	-	6	97	76.89	-1.73	0.54	0.624624
4991	3R_DroMel_CAF1	13,148,235 – 13,148,339	- - - - - - - - -	8162	13,148,235 – 13,148,339	+	5	117	74.91	-2.10	0.11	0.961149
4992	3R_DroMel_CAF1	13,148,778 – 13,148,872	- - - - - - - - -	8163	13,148,778 – 13,148,872	+	6	118	76.25	-1.11	0.68	0.633462
4993	3R_DroMel_CAF1	13,150,246 – 13,150,337	- - - - - - - - -	8164	13,150,246 – 13,150,337	+	6	120	79.30	-1.90	0.66	0.877442
4993	3R_DroMel_CAF1	13,150,246 – 13,150,337	- - - - - - - - -	8165	13,150,246 – 13,150,337	-	6	120	79.30	-2.47	0.61	0.942439
4994	3R_DroMel_CAF1	13,150,904 – 13,151,021	- - - - - - - - -	8166	13,150,904 – 13,151,021	+	6	120	95.03	-1.21	0.97	0.961400
4995	3R_DroMel_CAF1	13,153,772 – 13,153,926	- - - - - - - - -	8167	13,153,772 – 13,153,886	+	5	114	93.07	-1.32	0.86	0.677917
4995	3R_DroMel_CAF1	13,153,772 – 13,153,926	- - - - - - - - -	8168	13,153,807 – 13,153,926	+	5	119	86.89	-2.32	0.69	0.806959
4996	3R_DroMel_CAF1	13,154,950 – 13,155,043	- - - - - - - - -	8169	13,154,950 – 13,155,043	+	6	119	74.68	-2.09	0.54	0.947176
4997	3R_DroMel_CAF1	13,155,104 – 13,155,201	- - - - - - - - -	8170	13,155,104 – 13,155,201	+	6	113	81.86	-2.12	0.65	0.750728
4998	3R_DroMel_CAF1	13,163,940 – 13,164,073	- - - - - - - - -	8171	13,163,940 – 13,164,045	-	6	109	88.50	-1.46	0.89	0.690297
4998	3R_DroMel_CAF1	13,163,940 – 13,164,073	- - - - - - - - -	8172	13,163,980 – 13,164,073	+	5	107	79.90	-1.85	0.57	0.599029
4999	3R_DroMel_CAF1	13,169,641 – 13,169,739	- - - - - - - - -	8173	13,169,641 – 13,169,739	+	5	102	89.16	-2.46	0.82	0.990995
4999	3R_DroMel_CAF1	13,169,641 – 13,169,739	- - - - - - - - -	8174	13,169,641 – 13,169,739	-	5	102	89.16	-2.73	0.89	0.999511
5000	3R_DroMel_CAF1	13,179,094 – 13,179,220	- - - - - - - - -	8175	13,179,094 – 13,179,194	-	6	100	95.40	-1.32	0.96	0.974464
5000	3R_DroMel_CAF1	13,179,094 – 13,179,220	- - - - - - - - -	8176	13,179,126 – 13,179,220	-	6	94	92.62	-2.14	0.81	0.576712
5001	3R_DroMel_CAF1	13,180,202 – 13,180,294	- - - - - - - - -	8177	13,180,202 – 13,180,294	-	6	99	79.02	-2.52	0.48	0.853920
5002	3R_DroMel_CAF1	13,181,564 – 13,181,655	- - - - - - - - -	8178	13,181,564 – 13,181,655	+	5	91	96.92	-1.40	0.86	0.614557
5003	3R_DroMel_CAF1	13,181,916 – 13,182,020	- - - - - - - - -	8179	13,181,916 – 13,182,020	+	6	112	74.48	-2.35	0.68	0.991084
5003	3R_DroMel_CAF1	13,181,916 – 13,182,020	- - - - - - - - -	8180	13,181,916 – 13,182,020	-	6	112	74.48	-2.50	0.29	0.783241
5004	3R_DroMel_CAF1	13,182,579 – 13,182,674	- - - - - - - - -	8181	13,182,579 – 13,182,674	+	6	103	86.04	-2.58	0.82	0.896109
5005	3R_DroMel_CAF1	13,188,193 – 13,188,283	- - - - - - - - -	8182	13,188,193 – 13,188,283	-	5	90	86.67	-2.11	0.71	0.789552
5006	3R_DroMel_CAF1	13,193,071 – 13,193,200	- - - - - - - - -	8183	13,193,071 – 13,193,166	-	5	114	84.74	-2.72	0.65	0.922351
				8184	13,193,100 – 13,193,200	+	5	114	87.73	-2.92	0.65	0.799967
				8185	13,193,100 – 13,193,200	-	5	114	87.73	-4.56	0.78	0.998871
5007	3R_DroMel_CAF1	13,197,557 – 13,197,690	- - - - - - - - -	8186	13,197,557 – 13,197,650	+	4	93	79.14	-2.93	0.72	0.998801
5007	3R_DroMel_CAF1	13,197,557 – 13,197,690	- - - - - - - - -	8187	13,197,575 – 13,197,690	-	5	115	71.99	-1.67	0.22	0.620346
5008	3R_DroMel_CAF1	13,197,823 – 13,197,953	- - - - - - - - -	8188	13,197,823 – 13,197,919	-	6	107	80.97	-2.72	0.67	0.926824
5008	3R_DroMel_CAF1	13,197,823 – 13,197,953	- - - - - - - - -	8189	13,197,842 – 13,197,953	-	6	118	79.79	-1.60	0.60	0.554388
5009	3R_DroMel_CAF1	13,199,413 – 13,199,507	- - - - - - - - -	8190	13,199,413 – 13,199,507	+	6	103	88.25	-2.47	0.77	0.572860
5010	3R_DroMel_CAF1	13,209,200 – 13,209,320	- - - - - - - - -	8191	13,209,200 – 13,209,320	-	5	120	85.08	-1.82	0.68	0.616127
5011	3R_DroMel_CAF1	13,209,642 – 13,209,736	- - - - - - - - -	8192	13,209,642 – 13,209,736	+	6	111	76.18	-2.13	0.39	0.578568
5012	3R_DroMel_CAF1	13,211,538 – 13,211,661	- - - - - - - - -	8193	13,211,538 – 13,211,643	-	4	106	84.04	-1.87	0.69	0.755405
5012	3R_DroMel_CAF1	13,211,538 – 13,211,661	- - - - - - - - -	8194	13,211,565 – 13,211,661	-	4	97	82.56	-1.67	0.64	0.533200
5013	3R_DroMel_CAF1	13,213,572 – 13,213,692	- - - "knownCDS=Parent=FBtr0083435;Name=CG5319-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5319-RA" - - - - -	8195	13,213,572 – 13,213,692	+	6	120	94.56	-1.64	0.92	0.975457
5014	3R_DroMel_CAF1	13,219,396 – 13,219,498	- - - "knownCDS=Parent=FBtr0089896, FBtr0089897;Name=CREG-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5413-RA, FlyBase+Annotation+IDs:CG5413-RB" - - - - -	8196	13,219,396 – 13,219,498	-	6	107	78.25	-1.55	0.70	0.847253
5015	3R_DroMel_CAF1	13,222,967 – 13,223,081	- - - - - - - - -	8197	13,222,967 – 13,223,081	+	6	120	82.55	-2.61	0.73	0.865892
5015	3R_DroMel_CAF1	13,222,967 – 13,223,081	- - - - - - - - -	8198	13,222,967 – 13,223,081	-	6	120	82.55	-2.56	0.69	0.820651
5016	3R_DroMel_CAF1	13,230,683 – 13,230,803	- - - "knownCDS=texon3711;Parent=CG_NCBI_GNO_32364620, CG_BATZ_CON_47009967" - - - - -	8199	13,230,683 – 13,230,803	-	5	120	87.00	-1.54	0.79	0.594028
5017	3R_DroMel_CAF1	13,232,517 – 13,232,671	- - - - - - - - -	8200	13,232,517 – 13,232,636	-	5	120	79.14	-2.05	0.69	0.931015
5017	3R_DroMel_CAF1	13,232,517 – 13,232,671	- - - - - - - - -	8201	13,232,556 – 13,232,671	-	5	120	81.15	-2.38	0.70	0.964342
5018	3R_DroMel_CAF1	13,233,085 – 13,233,175	- - - - - - - - -	8202	13,233,085 – 13,233,175	+	5	120	71.27	-2.48	0.41	0.996067
5018	3R_DroMel_CAF1	13,233,085 – 13,233,175	- - - - - - - - -	8203	13,233,085 – 13,233,175	-	5	120	71.27	-2.30	0.18	0.976020
5019	3R_DroMel_CAF1	13,235,431 – 13,235,551	- - - "knownCDS=Parent=FBtr0083438;Name=CG5860-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5860-RA" - - - - -	8204	13,235,431 – 13,235,551	-	5	120	84.28	-1.80	0.63	0.500000
5020	3R_DroMel_CAF1	13,235,951 – 13,236,071	- - - "knownCDS=Parent=FBtr0083438;Name=CG5860-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5860-RA" - - - - -	8205	13,235,951 – 13,236,071	+	5	120	90.25	-1.34	0.92	0.802112
5021	3R_DroMel_CAF1	13,236,111 – 13,236,231	- - - "knownCDS=Parent=FBtr0083438;Name=CG5860-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5860-RA" - - - - -	8206	13,236,111 – 13,236,231	+	5	120	90.08	-1.68	0.76	0.666823
5021	3R_DroMel_CAF1	13,236,111 – 13,236,231		8207	13,236,111 – 13,236,231	-	5	120	90.08	-1.72	0.78	0.778790
5022	3R_DroMel_CAF1	13,237,786 – 13,237,906	- - - "knownCDS=Parent=FBtr0083439;Name=CG5863-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5863-RA" - - - - -	8208	13,237,786 – 13,237,906	-	5	120	94.00	-1.29	0.83	0.508124
5023	3R_DroMel_CAF1	13,239,098 – 13,239,203	- - - "knownCDS=texon3718;Parent=CG_NCBI_GNO_32365668, CG_RGUI_GID_mRNA_40008554, CG_DGIL_SNO_28365741, CG_BATZ_CON_47009971" - - - - -	8209	13,239,098 – 13,239,203	-	5	120	83.78	-2.47	0.69	0.935131
5024	3R_DroMel_CAF1	13,239,669 – 13,239,789	- - - - - - - - -	8210	13,239,669 – 13,239,789	+	5	120	92.50	-1.36	0.85	0.681829
5025	3R_DroMel_CAF1	13,239,978 – 13,240,094	- - - - - - - - -	8211	13,239,978 – 13,240,094	+	4	116	84.20	-1.68	0.77	0.709850
5026	3R_DroMel_CAF1	13,241,241 – 13,241,335	- - - - - - - - -	8212	13,241,241 – 13,241,335	-	5	120	81.42	-1.39	0.84	0.528003
5027	3R_DroMel_CAF1	13,241,502 – 13,241,622	- - - "knownCDS=Parent=FBtr0083440;Name=CG5866-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5866-RA" - - - - -	8213	13,241,502 – 13,241,622	+	5	120	88.17	-1.60	0.73	0.527299
5028	3R_DroMel_CAF1	13,249,420 – 13,249,510	- - - - - - - - -	8214	13,249,420 – 13,249,510	-	6	90	91.41	-2.60	0.82	0.904057
5029	3R_DroMel_CAF1	13,249,640 – 13,249,740	- - - - - - - - -	8215	13,249,640 – 13,249,740	+	6	118	80.61	-2.76	0.58	0.917050
5029	3R_DroMel_CAF1	13,249,640 – 13,249,740	- - - - - - - - -	8216	13,249,640 – 13,249,740	-	6	118	80.61	-2.62	0.53	0.840248
5030	3R_DroMel_CAF1	13,250,745 – 13,250,863	- - - - - - - - -	8217	13,250,745 – 13,250,863	-	5	119	91.05	-2.61	0.77	0.972244
5031	3R_DroMel_CAF1	13,253,957 – 13,254,056	- - - - - - - - -	8218	13,253,957 – 13,254,056	-	6	102	92.53	-1.27	0.88	0.560696
5032	3R_DroMel_CAF1	13,254,657 – 13,254,786	- - - - - - - - -	8219	13,254,657 – 13,254,749	-	6	103	80.88	-2.02	0.61	0.731843
5032	3R_DroMel_CAF1	13,254,657 – 13,254,786	- - - - - - - - -	8220	13,254,685 – 13,254,786	-	6	111	82.99	-2.02	0.71	0.690544
5033	3R_DroMel_CAF1	13,256,229 – 13,256,319	- - - - - - - - -	8221	13,256,229 – 13,256,319	+	6	119	70.14	-1.58	0.61	0.917477
5034	3R_DroMel_CAF1	13,258,909 – 13,259,001	- - - - - - - - -	8222	13,258,909 – 13,259,001	-	6	101	68.05	-3.16	0.14	0.916170
5035	3R_DroMel_CAF1	13,259,156 – 13,259,246	- - - - - - - - -	8223	13,259,156 – 13,259,246	+	6	93	88.18	-1.85	0.83	0.626980
5036	3R_DroMel_CAF1	13,263,337 – 13,263,430	- - - - - - - - -	8224	13,263,337 – 13,263,430	+	6	94	82.25	-2.84	0.59	0.808260
5037	3R_DroMel_CAF1	13,263,852 – 13,263,958	- - - - - - - - -	8225	13,263,852 – 13,263,958	+	6	114	80.20	-2.05	0.56	0.695378
5038	3R_DroMel_CAF1	13,264,547 – 13,264,656	- - - - - - - - -	8226	13,264,547 – 13,264,656	-	6	120	79.61	-2.21	0.49	0.637251
5039	3R_DroMel_CAF1	13,265,087 – 13,265,197	- - - - - - - - -	8227	13,265,087 – 13,265,197	+	6	120	76.80	-1.43	0.68	0.820849
5040	3R_DroMel_CAF1	13,266,052 – 13,266,143	- - - - - - - - -	8228	13,266,052 – 13,266,143	+	6	102	73.42	-2.01	0.56	0.956840
5041	3R_DroMel_CAF1	13,267,950 – 13,268,061	- - - - - - - - -	8229	13,267,950 – 13,268,061	+	5	120	74.46	-1.85	0.61	0.910105
5042	3R_DroMel_CAF1	13,272,012 – 13,272,109	- - - - - - - - -	8230	13,272,012 – 13,272,109	-	6	111	78.03	-1.71	0.54	0.541373
5043	3R_DroMel_CAF1	13,280,936 – 13,281,026	- - - - - - - - -	8231	13,280,936 – 13,281,026	-	6	108	86.22	-2.14	0.81	0.743511
5044	3R_DroMel_CAF1	13,284,240 – 13,284,342	- - - - - - - - -	8232	13,284,240 – 13,284,342	-	6	111	79.77	-2.06	0.64	0.873550
5045	3R_DroMel_CAF1	13,287,427 – 13,287,532	- - - - - - - - -	8233	13,287,427 – 13,287,532	+	6	119	81.65	-1.82	0.70	0.739165
5045	3R_DroMel_CAF1	13,287,427 – 13,287,532	- - - - - - - - -	8234	13,287,427 – 13,287,532	-	6	119	81.65	-1.88	0.68	0.740004
5046	3R_DroMel_CAF1	13,290,256 – 13,290,348	- - - - - - - - -	8235	13,290,256 – 13,290,348	-	6	105	83.60	-1.96	0.70	0.590484
5047	3R_DroMel_CAF1	13,293,543 – 13,293,639	- - - - - - - - -	8236	13,293,543 – 13,293,639	+	6	107	88.01	-2.10	0.80	0.605168
5048	3R_DroMel_CAF1	13,293,783 – 13,293,888	- - - - - - - - -	8237	13,293,783 – 13,293,888	-	6	106	80.62	-1.99	0.54	0.531313
5049	3R_DroMel_CAF1	13,294,000 – 13,294,109	- - - - - - - - -	8238	13,294,000 – 13,294,109	-	5	110	83.32	-1.70	0.90	0.816055
5050	3R_DroMel_CAF1	13,300,941 – 13,301,049	- - - "knownCDS=Parent=FBtr0089443;Name=CG31190-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31190-RA" - - - - -	8239	13,300,941 – 13,301,049	+	6	108	78.24	-1.95	0.55	0.771508
5051	3R_DroMel_CAF1	13,303,249 – 13,303,365	- - - "knownCDS=Parent=FBtr0089444;Name=CG31190-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31190-RB" - - - - -	8240	13,303,249 – 13,303,365	+	6	120	81.68	-1.64	0.68	0.645603
5052	3R_DroMel_CAF1	13,304,199 – 13,304,289	- - - - - - - - -	8241	13,304,199 – 13,304,289	+	3	90	91.85	-2.28	0.78	0.580923
5052	3R_DroMel_CAF1	13,304,199 – 13,304,289	- - - - - - - - -	8242	13,304,199 – 13,304,289	-	3	90	91.85	-3.23	0.75	0.800219
5053	3R_DroMel_CAF1	13,304,329 – 13,304,441	- - - "knownCDS=Parent=FBtr0089443;Name=CG31190-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31190-RA" - - - - -	8243	13,304,329 – 13,304,441	+	6	120	81.79	-1.44	0.66	0.500000
5053	3R_DroMel_CAF1	13,304,329 – 13,304,441		8244	13,304,329 – 13,304,441	-	6	120	81.79	-1.79	0.61	0.525513
5054	3R_DroMel_CAF1	13,305,816 – 13,306,015	- - - - - - - - -	8245	13,305,816 – 13,305,910	+	5	111	76.56	-2.41	0.45	0.978675
5054	3R_DroMel_CAF1	13,305,816 – 13,306,015	- - - - - - - - -	8246	13,305,910 – 13,306,015	-	6	120	74.22	-1.76	0.63	0.941702
5055	3R_DroMel_CAF1	13,306,912 – 13,307,019	- - - - - - - - -	8247	13,306,912 – 13,307,019	+	6	120	70.93	-2.18	0.39	0.933738
5056	3R_DroMel_CAF1	13,311,537 – 13,311,629	- - - - - - - - -	8248	13,311,537 – 13,311,629	+	6	99	77.33	-2.54	0.47	0.939636
5056	3R_DroMel_CAF1	13,311,537 – 13,311,629	- - - - - - - - -	8249	13,311,537 – 13,311,629	-	6	99	77.33	-2.05	0.64	0.949181
5057	3R_DroMel_CAF1	13,319,397 – 13,319,487	- - - - - - - - -	8250	13,319,397 – 13,319,487	-	5	120	67.70	-2.39	0.38	0.985968
5058	3R_DroMel_CAF1	13,327,244 – 13,327,357	- - - - - - - - -	8251	13,327,244 – 13,327,357	-	6	118	76.29	-2.61	0.55	0.986411
5059	3R_DroMel_CAF1	13,329,197 – 13,329,315	- - - - - - - - -	8252	13,329,197 – 13,329,315	-	5	120	89.84	-1.37	0.79	0.500000
5060	3R_DroMel_CAF1	13,330,121 – 13,330,215	- - - - - - - - -	8253	13,330,121 – 13,330,215	-	6	103	72.72	-1.75	0.48	0.707750
5061	3R_DroMel_CAF1	13,331,533 – 13,331,674	- - - - - - - - -	8254	13,331,533 – 13,331,638	-	6	105	76.44	-1.71	0.68	0.929632
5061	3R_DroMel_CAF1	13,331,533 – 13,331,674	- - - - - - - - -	8255	13,331,560 – 13,331,674	-	6	114	80.22	-1.51	0.67	0.682097
5062	3R_DroMel_CAF1	13,334,733 – 13,334,914	- - - - - - - - -	8256	13,334,733 – 13,334,824	-	5	94	91.48	-1.87	0.81	0.929613
5062	3R_DroMel_CAF1	13,334,733 – 13,334,914	- - - - - - - - -	8257	13,334,824 – 13,334,914	-	6	93	84.12	-2.05	0.75	0.646200
5063	3R_DroMel_CAF1	13,344,212 – 13,344,304	- - - - - - - - -	8258	13,344,212 – 13,344,304	-	6	92	77.89	-1.88	0.60	0.859481
5064	3R_DroMel_CAF1	13,351,433 – 13,351,534	- - - - - - - - -	8259	13,351,433 – 13,351,534	+	5	104	94.47	-1.42	0.91	0.919693
5065	3R_DroMel_CAF1	13,353,206 – 13,353,312	- - - - - - - - -	8260	13,353,206 – 13,353,312	+	6	108	81.66	-1.79	0.70	0.725441
5066	3R_DroMel_CAF1	13,353,708 – 13,353,807	- - - - - - - - -	8261	13,353,708 – 13,353,807	+	5	114	79.31	-2.22	0.43	0.800049
5067	3R_DroMel_CAF1	13,354,298 – 13,354,398	- - - - - - - - -	8262	13,354,298 – 13,354,398	+	6	113	70.72	-1.80	0.49	0.858965
5067	3R_DroMel_CAF1	13,354,298 – 13,354,398	- - - - - - - - -	8263	13,354,298 – 13,354,398	-	6	113	70.72	-1.99	0.32	0.621697
5068	3R_DroMel_CAF1	13,360,268 – 13,360,387	- - - - - - - - -	8264	13,360,268 – 13,360,387	+	5	120	78.71	-2.06	0.59	0.875402
5068	3R_DroMel_CAF1	13,360,268 – 13,360,387	- - - - - - - - -	8265	13,360,268 – 13,360,387	-	5	120	78.71	-2.28	0.46	0.895509
5069	3R_DroMel_CAF1	13,360,698 – 13,360,814	- - - - - - - - -	8266	13,360,698 – 13,360,814	+	5	120	88.48	-1.48	0.87	0.737693
5070	3R_DroMel_CAF1	13,366,346 – 13,366,465	- - - "knownCDS=Parent=FBtr0083456;Name=SF1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5836-RA" - - - - -	8267	13,366,346 – 13,366,443	+	6	117	79.48	-2.35	0.74	0.951127
				8268	13,366,346 – 13,366,443	-	6	117	79.48	-1.93	0.73	0.913542
				8269	13,366,366 – 13,366,465	+	6	102	83.81	-2.44	0.65	0.577504
5071	3R_DroMel_CAF1	13,378,848 – 13,378,941	- - - - - - - - -	8270	13,378,848 – 13,378,941	+	6	96	80.69	-2.12	0.74	0.896409
5072	3R_DroMel_CAF1	13,379,162 – 13,379,277	- - - - - - - - -	8271	13,379,162 – 13,379,277	-	4	117	81.03	-1.65	0.68	0.605488
5073	3R_DroMel_CAF1	13,382,031 – 13,382,134	- - - - - - - - -	8272	13,382,031 – 13,382,134	+	6	108	75.18	-1.71	0.62	0.906177
5074	3R_DroMel_CAF1	13,383,047 – 13,383,145	- - - - - - - - -	8273	13,383,047 – 13,383,145	-	6	113	79.02	-1.68	0.76	0.894591
5075	3R_DroMel_CAF1	13,385,286 – 13,385,493	- - - "knownCDS=Parent=FBtr0083457;Name=CG5829-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5829-RA" - - - - -	8274	13,385,286 – 13,385,393	+	6	114	78.98	-1.26	0.65	0.527423
5075	3R_DroMel_CAF1	13,385,286 – 13,385,493		8275	13,385,393 – 13,385,493	-	6	100	75.08	-1.35	0.60	0.543510
5076	3R_DroMel_CAF1	13,388,004 – 13,388,100	- - - - - - - - -	8276	13,388,004 – 13,388,100	-	6	102	77.92	-2.25	0.46	0.765656
5077	3R_DroMel_CAF1	13,393,521 – 13,393,628	- - - "knownCDS=Parent=FBtr0083458;Name=Hmx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5832-RA" - - - - -	8277	13,393,521 – 13,393,628	-	6	113	83.24	-2.25	0.62	0.551875
5078	3R_DroMel_CAF1	13,396,190 – 13,396,288	- - - - - - - - -	8278	13,396,190 – 13,396,288	-	6	98	77.41	-1.33	0.72	0.819093
5079	3R_DroMel_CAF1	13,398,013 – 13,398,111	- - - - - - - - -	8279	13,398,013 – 13,398,111	+	6	98	93.93	-1.32	0.88	0.611084
5080	3R_DroMel_CAF1	13,399,056 – 13,399,146	- - - - - - - - -	8280	13,399,056 – 13,399,146	-	6	99	76.41	-2.43	0.53	0.970973
5081	3R_DroMel_CAF1	13,409,609 – 13,409,720	- - - - - - - - -	8281	13,409,609 – 13,409,720	+	6	111	94.26	-0.99	0.92	0.576947
5082	3R_DroMel_CAF1	13,410,253 – 13,410,382	- - - - - - - - -	8282	13,410,253 – 13,410,346	-	6	100	80.30	-1.97	0.63	0.796222
				8283	13,410,280 – 13,410,382	+	6	114	78.83	-1.40	0.63	0.564857
				8284	13,410,280 – 13,410,382	-	6	114	78.83	-1.90	0.52	0.581124
5083	3R_DroMel_CAF1	13,411,576 – 13,411,688	- - - - - - - - -	8285	13,411,576 – 13,411,688	-	5	113	80.39	-1.64	0.62	0.500000
5084	3R_DroMel_CAF1	13,411,752 – 13,411,852	- - - - - - - - -	8286	13,411,752 – 13,411,852	-	6	112	79.32	-1.11	0.72	0.572126
5085	3R_DroMel_CAF1	13,413,153 – 13,413,248	- - - - - - - - -	8287	13,413,153 – 13,413,248	+	6	99	91.82	-3.43	0.83	0.986765
5085	3R_DroMel_CAF1	13,413,153 – 13,413,248	- - - - - - - - -	8288	13,413,153 – 13,413,248	-	6	99	91.82	-3.18	0.78	0.861671
5086	3R_DroMel_CAF1	13,414,091 – 13,414,183	- - - - - - - - -	8289	13,414,091 – 13,414,183	+	6	103	78.53	-1.60	0.64	0.775244
5086	3R_DroMel_CAF1	13,414,091 – 13,414,183	- - - - - - - - -	8290	13,414,091 – 13,414,183	-	6	103	78.53	-1.62	0.65	0.802614
5087	3R_DroMel_CAF1	13,414,738 – 13,414,840	- - - - - - - - -	8291	13,414,738 – 13,414,840	+	5	103	89.15	-1.65	0.92	0.949590
5088	3R_DroMel_CAF1	13,417,989 – 13,418,144	- - - - - - - - -	8292	13,417,989 – 13,418,086	+	6	111	80.69	-2.62	0.52	0.811188
				8293	13,417,989 – 13,418,086	-	6	111	80.69	-1.87	0.58	0.599412
				8294	13,418,046 – 13,418,144	+	5	119	79.86	-2.54	0.35	0.913506
5089	3R_DroMel_CAF1	13,421,425 – 13,421,545	- - - "knownCDS=Parent=FBtr0083461;Name=Sgs5-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7596-RA" - - - - -	8295	13,421,425 – 13,421,545	-	4	120	91.94	-2.16	0.90	0.965347
5090	3R_DroMel_CAF1	13,423,039 – 13,423,142	- - - - - - - - -	8296	13,423,039 – 13,423,142	+	5	111	81.04	-1.80	0.72	0.788192
5091	3R_DroMel_CAF1	13,424,186 – 13,424,323	- - - - - - - - -	8297	13,424,186 – 13,424,287	-	5	101	89.28	-1.72	0.72	0.539807
5091	3R_DroMel_CAF1	13,424,186 – 13,424,323	- - - - - - - - -	8298	13,424,225 – 13,424,323	-	5	98	89.67	-1.41	0.81	0.574617
5092	3R_DroMel_CAF1	13,424,771 – 13,424,893	- - - - - - - - -	8299	13,424,771 – 13,424,881	-	6	120	77.80	-4.42	0.50	0.996666
5092	3R_DroMel_CAF1	13,424,771 – 13,424,893	- - - - - - - - -	8300	13,424,801 – 13,424,893	-	5	92	96.96	-2.54	1.00	0.999932
5093	3R_DroMel_CAF1	13,426,451 – 13,426,596	- - - - - - - - -	8301	13,426,451 – 13,426,566	-	6	120	80.34	-1.80	0.59	0.612506
5093	3R_DroMel_CAF1	13,426,451 – 13,426,596	- - - - - - - - -	8302	13,426,488 – 13,426,596	-	6	120	78.54	-1.77	0.56	0.640963
5094	3R_DroMel_CAF1	13,429,555 – 13,429,665	- - - - - - - - -	8303	13,429,555 – 13,429,665	+	6	120	80.87	-2.42	0.59	0.843173
5095	3R_DroMel_CAF1	13,429,884 – 13,429,990	- - - - - - - - -	8304	13,429,884 – 13,429,990	-	5	106	94.06	-1.58	0.87	0.924339
5096	3R_DroMel_CAF1	13,430,508 – 13,430,605	- - - - - - - - -	8305	13,430,508 – 13,430,605	-	5	120	74.49	-1.88	0.49	0.783815
5097	3R_DroMel_CAF1	13,435,742 – 13,435,943	- - - "knownCDS=Parent=FBtr0083463;Name=CG14329-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14329-RA" - - - - -	8306	13,435,742 – 13,435,838	-	6	96	80.42	-1.32	0.66	0.539160
5097	3R_DroMel_CAF1	13,435,742 – 13,435,943		8307	13,435,838 – 13,435,943	+	6	108	77.54	-1.05	0.76	0.712298
5098	3R_DroMel_CAF1	13,436,611 – 13,436,705	- - - - - - - - -	8308	13,436,611 – 13,436,705	-	6	103	64.51	-2.18	0.29	0.814072
5099	3R_DroMel_CAF1	13,439,309 – 13,439,399	- - - - - - - - -	8309	13,439,309 – 13,439,399	+	6	96	83.13	-1.70	0.73	0.596874
5099	3R_DroMel_CAF1	13,439,309 – 13,439,399	- - - - - - - - -	8310	13,439,309 – 13,439,399	-	6	96	83.13	-1.33	0.86	0.535884
5100	3R_DroMel_CAF1	13,442,093 – 13,442,293	- - - - - - - - -	8311	13,442,093 – 13,442,213	+	3	120	94.44	-2.03	0.90	0.744985
				8312	13,442,173 – 13,442,293	+	3	120	94.44	-3.08	0.94	0.984755
				8313	13,442,173 – 13,442,293	-	3	120	94.44	-3.48	0.91	0.977714
5101	3R_DroMel_CAF1	13,443,793 – 13,443,943	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000223;Name=Dmel_Pro_TGG_14000223;TFAMID=DmelPTGG-13443903" "tRNAscan=type:Pro:anticodon:TGG f:13443831_t:13443940_strand=-_cove=75.74" - - "Rfam=BX649307.12/28705-28634_RF00005;tRNA;\|1e-22" - - - "Flybase=FBgn0011944:transfer_RNA:pro:90Ca:cytosolic_tRNA_gene\|2e-36"	8314	13,443,793 – 13,443,910	+	6	118	82.71	-3.44	0.89	0.985225
				8315	13,443,793 – 13,443,910	-	6	118	82.71	-1.46	0.92	0.737435
				8316	13,443,830 – 13,443,943	+	6	120	80.94	-1.74	0.81	0.841961
5102	3R_DroMel_CAF1	13,445,443 – 13,445,572	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000224;Name=Dmel_Ala_AGC_14000224;TFAMID=DmelAAGC-13445460" "tRNAscan=type:Ala:anticodon:AGC f:13445459_t:13445547_strand=+_cove=59.84" - - "Rfam=AC009461.5/119709-119637_RF00005;tRNA;\|2e-35" - - - "Flybase=FBgn0011840:transfer_RNA:ala:90C:cytosolic_tRNA_gene\|3e-37"	8317	13,445,443 – 13,445,556	+	6	120	78.15	-1.25	0.92	0.807052
				8318	13,445,443 – 13,445,556	-	6	120	78.15	-1.69	0.77	0.925715
				8319	13,445,480 – 13,445,572	+	4	97	75.00	-1.11	0.81	0.555377
				8320	13,445,480 – 13,445,572	-	4	97	75.00	-1.45	0.80	0.845751
5103	3R_DroMel_CAF1	13,445,684 – 13,445,777	"known=exon_Parent=Dmel\CR_TRNA_ATT_14000225" "tRNAscan=type:Pro:anticodon:TGG f:13445684_t:13445750_strand=+_cove=58.24" - - "Rfam=BX649307.12/28705-28634_RF00005;tRNA;\|9e-22" - - - "Flybase=FBgn0011944:transfer_RNA:pro:90Ca:cytosolic_tRNA_gene\|1e-35"	8321	13,445,684 – 13,445,777	+	4	105	84.00	-2.27	0.82	0.962639
5103	3R_DroMel_CAF1	13,445,684 – 13,445,777		8322	13,445,684 – 13,445,777	-	4	105	84.00	-2.71	0.85	0.992870
5104	3R_DroMel_CAF1	13,445,853 – 13,445,969	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000226;Name=Dmel_Ala_AGC_14000226;TFAMID=DmelAAGC-13445938" "tRNAscan=type:Ala:anticodon:AGC f:13445865_t:13445949_strand=-_cove=59.84" - - "Rfam=AC009461.5/119709-119637_RF00005;tRNA;\|2e-35" - - - "Flybase=FBgn0011840:transfer_RNA:ala:90C:cytosolic_tRNA_gene\|3e-37"	8323	13,445,853 – 13,445,969	+	6	119	78.16	-1.12	0.75	0.711744
5104	3R_DroMel_CAF1	13,445,853 – 13,445,969		8324	13,445,853 – 13,445,969	-	6	119	78.16	-1.21	0.88	0.795833
5105	3R_DroMel_CAF1	13,448,252 – 13,448,354	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000227;Name=Dmel_Ala_AGC_14000227;TFAMID=DmelAAGC-13448268" "tRNAscan=type:Ala:anticodon:AGC f:13448267_t:13448354_strand=+_cove=59.84" - - "Rfam=AC009461.5/119709-119637_RF00005;tRNA;\|2e-35" - - - "Flybase=FBgn0011840:transfer_RNA:ala:90C:cytosolic_tRNA_gene\|3e-37"	8325	13,448,252 – 13,448,354	+	6	113	86.89	-1.49	0.87	0.599936
5105	3R_DroMel_CAF1	13,448,252 – 13,448,354		8326	13,448,252 – 13,448,354	-	6	113	86.89	-2.39	0.81	0.792715
5106	3R_DroMel_CAF1	13,450,315 – 13,450,411	- - - - "Rfam=AE003713.3/89788-89861_RF00005;tRNA;\|9e-19" - - - "Flybase=FBgn0011993:transfer_RNA:thr:90Ca:cytosolic_tRNA_gene\|1e-20"	8327	13,450,315 – 13,450,411	+	4	120	75.30	-1.81	0.60	0.749471
5107	3R_DroMel_CAF1	13,450,491 – 13,450,623	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000229;Name=Dmel_Thr_AGT_14000229;TFAMID=DmelTAGT-13450601" "tRNAscan=type:Thr:anticodon:AGT f:13450527_t:13450636_strand=-_cove=75.61" - - "Rfam=AE003713.3/89788-89861_RF00005;tRNA;\|6e-36" - - - "Flybase=FBgn0011993:transfer_RNA:thr:90Ca:cytosolic_tRNA_gene\|9e-38"	8328	13,450,491 – 13,450,595	+	6	120	80.01	-0.99	0.77	0.505006
5107	3R_DroMel_CAF1	13,450,491 – 13,450,623		8329	13,450,521 – 13,450,623	+	6	120	79.58	-1.01	0.91	0.528836
5108	3R_DroMel_CAF1	13,451,253 – 13,451,367	- - - "knownCDS=Parent=FBtr0083470;Name=AttD-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7629-RA" - - - - -	8330	13,451,253 – 13,451,367	+	6	117	73.45	-1.29	0.68	0.864219
5109	3R_DroMel_CAF1	13,453,276 – 13,453,381	- - - "knownCDS=Parent=FBtr0083471;Name=CG14325-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14325-RA" - - - - -	8331	13,453,276 – 13,453,381	-	6	105	81.14	-1.16	0.75	0.524084
5110	3R_DroMel_CAF1	13,456,482 – 13,456,574	- - - - - - - - -	8332	13,456,482 – 13,456,574	-	6	95	87.99	-2.22	0.83	0.832636
5111	3R_DroMel_CAF1	13,457,398 – 13,457,497	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000232;Name=Dmel_Pro_TGG_14000232;TFAMID=DmelPTGG-13457401" "tRNAscan=type:Pro:anticodon:TGG f:13457400_t:13457473_strand=+_cove=75.74" - - "Rfam=BX649307.12/28705-28634_RF00005;tRNA;\|6e-23" - - - "Flybase=FBgn0011944:transfer_RNA:pro:90Ca:cytosolic_tRNA_gene\|1e-36"	8333	13,457,398 – 13,457,497	+	6	120	79.52	-1.71	0.96	0.920426
5111	3R_DroMel_CAF1	13,457,398 – 13,457,497		8334	13,457,398 – 13,457,497	-	6	120	79.52	-3.19	0.98	0.985861
5112	3R_DroMel_CAF1	13,462,338 – 13,462,431	- - - - - - - - -	8335	13,462,338 – 13,462,431	+	6	100	77.32	-1.69	0.58	0.731376
5113	3R_DroMel_CAF1	13,470,992 – 13,471,122	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000233;Name=Dmel_Ala_AGC_14000233;TFAMID=DmelAAGC-13471101" "tRNAscan=type:Ala:anticodon:AGC f:13471028_t:13471136_strand=-_cove=59.84" - - "Rfam=AC009461.5/119709-119637_RF00005;tRNA;\|2e-35" - - - "Flybase=FBgn0011840:transfer_RNA:ala:90C:cytosolic_tRNA_gene\|3e-37"	8336	13,470,992 – 13,471,088	+	6	105	80.61	-1.53	0.85	0.799212
				8337	13,470,992 – 13,471,088	-	6	105	80.61	-1.09	0.83	0.529160
				8338	13,471,021 – 13,471,122	+	6	107	80.30	-1.86	0.79	0.887335
				8339	13,471,021 – 13,471,122	-	6	107	80.30	-1.33	0.95	0.747856
5114	3R_DroMel_CAF1	13,471,311 – 13,471,424	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000234;Name=Dmel_Pro_TGG_14000234;TFAMID=DmelPTGG-13471332" "tRNAscan=type:Pro:anticodon:TGG f:13471331_t:13471422_strand=+_cove=75.74" - - "Rfam=BX649307.12/28705-28634_RF00005;tRNA;\|7e-23" - - - "Flybase=FBgn0011944:transfer_RNA:pro:90Ca:cytosolic_tRNA_gene\|1e-36"	8340	13,471,311 – 13,471,424	+	6	119	82.96	-1.37	0.82	0.543505
5114	3R_DroMel_CAF1	13,471,311 – 13,471,424		8341	13,471,311 – 13,471,424	-	6	119	82.96	-3.07	0.84	0.962317
5115	3R_DroMel_CAF1	13,472,072 – 13,472,165	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000235;Name=Dmel_Ala_AGC_14000235;TFAMID=DmelAAGC-13472090" "tRNAscan=type:Ala:anticodon:AGC f:13472089_t:13472178_strand=+_cove=59.84" - - "Rfam=AC009461.5/119709-119637_RF00005;tRNA;\|2e-35" - - - "Flybase=FBgn0011840:transfer_RNA:ala:90C:cytosolic_tRNA_gene\|2e-37"	8342	13,472,072 – 13,472,165	+	6	99	80.04	-1.71	0.84	0.876615
5115	3R_DroMel_CAF1	13,472,072 – 13,472,165		8343	13,472,072 – 13,472,165	-	6	99	80.04	-1.43	0.69	0.693960
5116	3R_DroMel_CAF1	13,472,360 – 13,472,492	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000236;Name=Dmel_Ala_AGC_14000236;TFAMID=DmelAAGC-13472477" "tRNAscan=type:Ala:anticodon:AGC f:13472404_t:13472520_strand=-_cove=59.84" - - "Rfam=AC009461.5/119709-119637_RF00005;tRNA;\|3e-35" - - - "Flybase=FBgn0011840:transfer_RNA:ala:90C:cytosolic_tRNA_gene\|3e-37"	8344	13,472,360 – 13,472,457	+	6	116	67.54	-1.09	0.72	0.886315
				8345	13,472,360 – 13,472,457	-	6	116	67.54	-0.78	0.75	0.780118
				8346	13,472,379 – 13,472,492	+	6	115	79.86	-1.26	0.81	0.708954
				8347	13,472,379 – 13,472,492	-	6	115	79.86	-1.29	0.91	0.728695
5117	3R_DroMel_CAF1	13,474,907 – 13,474,999	- - - - - - - - -	8348	13,474,907 – 13,474,999	-	6	99	91.80	-2.42	0.82	0.837089
5118	3R_DroMel_CAF1	13,476,211 – 13,476,310	- - - - - - - - -	8349	13,476,211 – 13,476,310	+	6	99	88.94	-1.64	0.84	0.548579
5119	3R_DroMel_CAF1	13,482,720 – 13,482,813	- - - - - - - - -	8350	13,482,720 – 13,482,813	+	6	95	82.92	-3.53	0.71	0.924687
5119	3R_DroMel_CAF1	13,482,720 – 13,482,813	- - - - - - - - -	8351	13,482,720 – 13,482,813	-	6	95	82.92	-2.56	0.66	0.760533
5120	3R_DroMel_CAF1	13,482,851 – 13,482,944	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000237;Name=Dmel_Ala_AGC_14000237;TFAMID=DmelAAGC-13482867" "tRNAscan=type:Ala:anticodon:AGC f:13482866_t:13482953_strand=+_cove=63.54" - - "Rfam=AC009461.5/119709-119637_RF00005;tRNA;\|4e-33" - - - "Flybase=FBgn0051577:CR31577:cytosolic_tRNA_gene\|2e-37"	8352	13,482,851 – 13,482,944	+	6	120	82.14	-1.66	0.91	0.840884
5120	3R_DroMel_CAF1	13,482,851 – 13,482,944		8353	13,482,851 – 13,482,944	-	6	120	82.14	-1.36	0.87	0.621551
5121	3R_DroMel_CAF1	13,484,102 – 13,484,214	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000238;Name=Dmel_Ala_AGC_14000238;TFAMID=DmelAAGC-13484175" "tRNAscan=type:Ala:anticodon:AGC f:13484102_t:13484174_strand=-_cove=59.84" - - "Rfam=AC009461.5/119709-119637_RF00005;tRNA;\|2e-35" - - - "Flybase=FBgn0011840:transfer_RNA:ala:90C:cytosolic_tRNA_gene\|3e-37"	8354	13,484,102 – 13,484,214	+	6	120	77.99	-1.22	0.79	0.804641
5121	3R_DroMel_CAF1	13,484,102 – 13,484,214		8355	13,484,102 – 13,484,214	-	6	120	77.99	-1.39	0.89	0.873865
5122	3R_DroMel_CAF1	13,484,666 – 13,484,843	- - - - - - - - -	8356	13,484,666 – 13,484,767	+	5	101	89.50	-2.61	0.73	0.931722
				8357	13,484,703 – 13,484,806	+	6	119	80.77	-3.60	0.61	0.970494
				8358	13,484,730 – 13,484,843	+	6	120	79.57	-2.32	0.53	0.822893
5123	3R_DroMel_CAF1	13,485,287 – 13,485,397	- - - - - - - - -	8359	13,485,287 – 13,485,397	+	6	120	78.78	-2.08	0.49	0.625097
5124	3R_DroMel_CAF1	13,492,211 – 13,492,321	- - - - - - - - -	8360	13,492,211 – 13,492,321	+	5	110	92.60	-2.27	0.93	0.999621
5124	3R_DroMel_CAF1	13,492,211 – 13,492,321	- - - - - - - - -	8361	13,492,211 – 13,492,321	-	5	110	92.60	-1.39	0.88	0.839302
5125	3R_DroMel_CAF1	13,493,871 – 13,494,007	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000239;Name=Dmel_Ala_AGC_14000239;TFAMID=DmelAAGC-13493909" "tRNAscan=type:Ala:anticodon:AGC f:13493908_t:13494017_strand=+_cove=59.84" - - "Rfam=AC009461.5/119709-119637_RF00005;tRNA;\|3e-35" - - - "Flybase=FBgn0011840:transfer_RNA:ala:90C:cytosolic_tRNA_gene\|4e-37"	8362	13,493,871 – 13,493,985	+	6	120	82.87	-1.61	0.82	0.682824
				8363	13,493,905 – 13,494,007	+	6	120	76.84	-2.28	0.90	0.975077
				8364	13,493,905 – 13,494,007	-	6	120	76.84	-1.40	0.85	0.917888
5126	3R_DroMel_CAF1	13,497,525 – 13,497,623	- - - - - - - - -	8365	13,497,525 – 13,497,623	+	6	98	76.67	-1.69	0.61	0.826713
5126	3R_DroMel_CAF1	13,497,525 – 13,497,623	- - - - - - - - -	8366	13,497,525 – 13,497,623	-	6	98	76.67	-1.80	0.62	0.897285
5127	3R_DroMel_CAF1	13,498,162 – 13,498,262	- - - "knownCDS=Parent=FBtr0083478;Name=ald-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7643-RA" - - - - -	8367	13,498,162 – 13,498,262	-	6	102	80.26	-1.49	0.66	0.637037
5128	3R_DroMel_CAF1	13,500,780 – 13,500,878	- - - "knownCDS=Parent=FBtr0089412, FBtr0089413, FBtr0089414, FBtr0089415, FBtr0089416, FBtr0089417;Name=CG18212-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18212-RF, FlyBase+Annotation+IDs:CG18212-RE, FlyBase+Annotation+IDs:CG18212-RG, FlyBase+Annotation+IDs:CG18212-RA, FlyBase+Annotation+IDs:CG18212-RD, FlyBase+Annotation+IDs:CG18212-RB" - - - - -	8368	13,500,780 – 13,500,878	+	6	103	81.69	-2.79	0.64	0.889040
5128	3R_DroMel_CAF1	13,500,780 – 13,500,878		8369	13,500,780 – 13,500,878	-	6	103	81.69	-2.75	0.75	0.926010
5129	3R_DroMel_CAF1	13,500,986 – 13,501,106	- - - "knownCDS=Parent=FBtr0089412, FBtr0089413, FBtr0089414, FBtr0089415, FBtr0089416, FBtr0089417;Name=CG18212-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18212-RF, FlyBase+Annotation+IDs:CG18212-RE, FlyBase+Annotation+IDs:CG18212-RG, FlyBase+Annotation+IDs:CG18212-RA, FlyBase+Annotation+IDs:CG18212-RD, FlyBase+Annotation+IDs:CG18212-RB" - - - - -	8370	13,500,986 – 13,501,106	+	6	120	77.35	-1.84	0.74	0.951192
5129	3R_DroMel_CAF1	13,500,986 – 13,501,106		8371	13,500,986 – 13,501,106	-	6	120	77.35	-1.36	0.62	0.561709
5130	3R_DroMel_CAF1	13,501,787 – 13,501,893	- - - "knownCDS=Parent=FBtr0089412, FBtr0089413, FBtr0089414, FBtr0089415, FBtr0089416, FBtr0089417;Name=CG18212-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18212-RF, FlyBase+Annotation+IDs:CG18212-RE, FlyBase+Annotation+IDs:CG18212-RG, FlyBase+Annotation+IDs:CG18212-RA, FlyBase+Annotation+IDs:CG18212-RD, FlyBase+Annotation+IDs:CG18212-RB" - - - - -	8372	13,501,787 – 13,501,893	+	6	120	72.70	-2.07	0.34	0.649170
5131	3R_DroMel_CAF1	13,502,053 – 13,502,164	- - - "knownCDS=Parent=FBtr0089412, FBtr0089413, FBtr0089414, FBtr0089415, FBtr0089416, FBtr0089417;Name=CG18212-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18212-RF, FlyBase+Annotation+IDs:CG18212-RE, FlyBase+Annotation+IDs:CG18212-RG, FlyBase+Annotation+IDs:CG18212-RA, FlyBase+Annotation+IDs:CG18212-RD, FlyBase+Annotation+IDs:CG18212-RB" - - - - -	8373	13,502,053 – 13,502,164	+	6	120	71.87	-1.83	0.48	0.822657
5132	3R_DroMel_CAF1	13,513,831 – 13,513,945	- - - - - - - - -	8374	13,513,831 – 13,513,945	-	5	120	84.89	-2.29	0.74	0.929518
5133	3R_DroMel_CAF1	13,515,162 – 13,515,360	- - - - - - - - -	8375	13,515,162 – 13,515,280	+	5	120	96.28	-1.32	0.94	0.880540
				8376	13,515,200 – 13,515,320	+	5	120	97.00	-1.29	0.97	0.877711
				8377	13,515,200 – 13,515,320	-	5	120	97.00	-2.37	0.98	0.999821
				8378	13,515,240 – 13,515,360	-	5	120	91.45	-1.59	0.82	0.803528
5134	3R_DroMel_CAF1	13,516,733 – 13,516,853	- - - "knownCDS=Parent=FBtr0089582;Name=osa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7467-RA" - - - - -	8379	13,516,733 – 13,516,853	+	6	120	80.06	-1.89	0.58	0.683433
5135	3R_DroMel_CAF1	13,519,561 – 13,519,661	- - - "knownCDS=Parent=FBtr0089582;Name=osa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7467-RA" - - - - -	8380	13,519,561 – 13,519,661	+	6	102	79.19	-2.01	0.64	0.887758
5136	3R_DroMel_CAF1	13,519,779 – 13,519,872	- - - - - - - - -	8381	13,519,779 – 13,519,872	-	6	96	75.58	-1.46	0.74	0.931546
5137	3R_DroMel_CAF1	13,520,790 – 13,520,889	- - - "knownCDS=Parent=FBtr0089582;Name=osa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7467-RA" - - - - -	8382	13,520,790 – 13,520,889	+	6	105	83.86	-1.99	0.84	0.830489
5137	3R_DroMel_CAF1	13,520,790 – 13,520,889		8383	13,520,790 – 13,520,889	-	6	105	83.86	-2.60	0.78	0.859328
5138	3R_DroMel_CAF1	13,523,348 – 13,523,468	- - - - - - - - -	8384	13,523,348 – 13,523,468	-	6	120	96.72	-1.54	0.89	0.886998
5139	3R_DroMel_CAF1	13,524,124 – 13,524,424	- - - "knownCDS=Parent=FBtr0089582;Name=osa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7467-RA" - - - - -	8385	13,524,124 – 13,524,230	+	6	115	76.45	-1.42	0.66	0.787013
				8386	13,524,150 – 13,524,270	-	6	120	76.28	-1.95	0.62	0.940296
				8387	13,524,190 – 13,524,305	-	6	118	77.72	-2.14	0.53	0.867933
				8388	13,524,305 – 13,524,424	-	6	120	76.76	-1.96	0.51	0.752843
5140	3R_DroMel_CAF1	13,528,384 – 13,528,475	- - - - - - - - -	8389	13,528,384 – 13,528,475	+	3	98	68.42	-3.39	0.48	0.999654
5140	3R_DroMel_CAF1	13,528,384 – 13,528,475	- - - - - - - - -	8390	13,528,384 – 13,528,475	-	3	98	68.42	-2.95	0.46	0.994096
5141	3R_DroMel_CAF1	13,528,861 – 13,528,964	- - - - - - - - -	8391	13,528,861 – 13,528,964	+	5	109	88.54	-1.92	0.74	0.767558
5142	3R_DroMel_CAF1	13,529,684 – 13,529,777	- - - - - - - - -	8392	13,529,684 – 13,529,777	+	5	102	92.25	-1.04	0.95	0.500000
5143	3R_DroMel_CAF1	13,530,616 – 13,530,729	- - - - - - - - -	8393	13,530,616 – 13,530,729	+	5	120	88.65	-1.69	0.75	0.647187
5144	3R_DroMel_CAF1	13,532,596 – 13,532,709	- - - - - - - - -	8394	13,532,596 – 13,532,709	-	4	113	84.47	-2.66	0.76	0.981251
5145	3R_DroMel_CAF1	13,533,035 – 13,533,173	- - - - - - - - -	8395	13,533,035 – 13,533,133	-	4	102	95.50	-1.52	0.92	0.608463
				8396	13,533,056 – 13,533,173	+	4	117	94.00	-2.52	0.87	0.961804
				8397	13,533,056 – 13,533,173	-	4	117	94.00	-1.96	0.85	0.832626
5146	3R_DroMel_CAF1	13,533,865 – 13,533,964	- - - "knownCDS=Parent=FBtr0089582;Name=osa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7467-RA" - - - - -	8398	13,533,865 – 13,533,964	-	5	113	78.87	-1.97	0.49	0.652426
5147	3R_DroMel_CAF1	13,536,363 – 13,536,474	- - - - - - - - -	8399	13,536,363 – 13,536,474	+	3	111	80.97	-1.73	0.64	0.520271
5147	3R_DroMel_CAF1	13,536,363 – 13,536,474	- - - - - - - - -	8400	13,536,363 – 13,536,474	-	3	111	80.97	-1.36	0.77	0.500000
5148	3R_DroMel_CAF1	13,537,823 – 13,537,920	- - - - - - - - -	8401	13,537,823 – 13,537,920	+	3	99	71.63	-1.96	0.51	0.650615
5148	3R_DroMel_CAF1	13,537,823 – 13,537,920	- - - - - - - - -	8402	13,537,823 – 13,537,920	-	3	99	71.63	-1.93	0.67	0.997469
5149	3R_DroMel_CAF1	13,538,111 – 13,538,227	- - - - - - - - -	8403	13,538,111 – 13,538,227	+	4	116	97.27	-1.52	0.97	0.564704
5150	3R_DroMel_CAF1	13,538,725 – 13,538,982	- - - - - - - - -	8404	13,538,725 – 13,538,823	+	4	99	94.25	-2.14	0.79	0.678637
				8405	13,538,725 – 13,538,823	-	4	99	94.25	-1.99	0.81	0.719548
				8406	13,538,744 – 13,538,858	-	5	120	83.16	-2.18	0.69	0.874618
				8407	13,538,783 – 13,538,874	-	3	96	78.57	-2.25	0.59	0.871963
				8408	13,538,874 – 13,538,982	-	3	116	84.71	-1.99	0.67	0.561545
5151	3R_DroMel_CAF1	13,539,447 – 13,539,660	- - - - - - - - -	8409	13,539,447 – 13,539,555	+	5	120	78.56	-2.02	0.60	0.871985
				8410	13,539,475 – 13,539,586	+	5	120	80.14	-2.74	0.72	0.993903
				8411	13,539,515 – 13,539,624	+	4	115	91.10	-2.50	0.87	0.982076
				8412	13,539,555 – 13,539,660	+	4	115	88.19	-2.48	0.62	0.566007
5152	3R_DroMel_CAF1	13,540,312 – 13,540,418	- - - - - - - - -	8413	13,540,312 – 13,540,418	+	3	106	100.00	-1.38	1.00	0.575507
5152	3R_DroMel_CAF1	13,540,312 – 13,540,418	- - - - - - - - -	8414	13,540,312 – 13,540,418	-	3	106	100.00	-3.25	1.00	0.989728
5153	3R_DroMel_CAF1	13,540,670 – 13,540,788	- - - - - - - - -	8415	13,540,670 – 13,540,788	-	4	118	90.16	-2.00	0.85	0.919380
5154	3R_DroMel_CAF1	13,541,000 – 13,541,108	- - - - - - - - -	8416	13,541,000 – 13,541,108	+	3	111	93.67	-1.79	0.93	0.718863
5154	3R_DroMel_CAF1	13,541,000 – 13,541,108	- - - - - - - - -	8417	13,541,000 – 13,541,108	-	3	111	93.67	-1.92	0.88	0.629566
5155	3R_DroMel_CAF1	13,541,735 – 13,541,849	- - - "knownCDS=Parent=FBtr0089582;Name=osa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7467-RA" - - - - -	8418	13,541,735 – 13,541,849	-	5	114	85.00	-1.82	0.82	0.827550
5156	3R_DroMel_CAF1	13,541,917 – 13,542,047	- - - "knownCDS=Parent=FBtr0089582;Name=osa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7467-RA" - - - - -	8419	13,541,917 – 13,542,010	+	3	93	98.57	-2.84	0.99	0.986121
5156	3R_DroMel_CAF1	13,541,917 – 13,542,047		8420	13,541,951 – 13,542,047	+	4	99	86.15	-1.96	0.77	0.851422
5157	3R_DroMel_CAF1	13,542,128 – 13,542,428	- - - "knownCDS=Parent=FBtr0089582;Name=osa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7467-RA" - - - - -	8421	13,542,128 – 13,542,227	-	6	108	78.36	-2.61	0.40	0.791281
				8422	13,542,162 – 13,542,267	+	6	108	73.09	-1.96	0.53	0.938802
				8423	13,542,162 – 13,542,267	-	6	108	73.09	-3.14	0.49	0.998627
				8424	13,542,193 – 13,542,297	+	6	111	75.74	-1.92	0.59	0.922251
				8425	13,542,193 – 13,542,297	-	6	111	75.74	-2.51	0.49	0.976025
				8426	13,542,227 – 13,542,323	+	3	96	75.69	-2.54	0.72	0.999444
				8427	13,542,227 – 13,542,323	-	3	96	75.69	-3.17	0.77	0.999953
				8428	13,542,323 – 13,542,428	-	4	111	68.52	-2.08	0.46	0.870801
5158	3R_DroMel_CAF1	13,542,964 – 13,543,069	- - - - - - - - -	8429	13,542,964 – 13,543,069	+	5	111	90.69	-1.76	0.83	0.914220
5159	3R_DroMel_CAF1	13,543,093 – 13,543,199	- - - - - - - - -	8430	13,543,093 – 13,543,199	-	5	115	92.34	-1.61	0.77	0.616204
5160	3R_DroMel_CAF1	13,543,518 – 13,543,608	- - - - - - - - -	8431	13,543,518 – 13,543,608	+	4	90	98.33	-2.47	0.95	0.924046
5161	3R_DroMel_CAF1	13,545,054 – 13,545,360	- - - - - - - - -	8432	13,545,054 – 13,545,172	-	4	120	81.73	-2.85	0.71	0.994210
				8433	13,545,133 – 13,545,252	+	4	120	86.75	-1.69	0.69	0.627145
				8434	13,545,252 – 13,545,360	-	4	108	91.20	-1.53	0.76	0.500000
5162	3R_DroMel_CAF1	13,546,270 – 13,546,383	- - - "knownCDS=Parent=FBtr0083507, FBtr0083508;Name=pxt-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7660-RA, FlyBase+Annotation+IDs:CG7660-RB" - - - - -	8435	13,546,270 – 13,546,383	+	6	120	78.90	-1.43	0.61	0.513716
5163	3R_DroMel_CAF1	13,552,233 – 13,552,380	- - - - - - - - -	8436	13,552,233 – 13,552,340	-	5	111	77.80	-2.24	0.54	0.940176
5163	3R_DroMel_CAF1	13,552,233 – 13,552,380	- - - - - - - - -	8437	13,552,265 – 13,552,380	-	5	117	81.19	-2.12	0.65	0.875991
5164	3R_DroMel_CAF1	13,554,857 – 13,554,995	- - - - - - - - -	8438	13,554,857 – 13,554,955	+	5	119	76.89	-1.80	0.64	0.835102
5164	3R_DroMel_CAF1	13,554,857 – 13,554,995	- - - - - - - - -	8439	13,554,897 – 13,554,995	+	6	120	72.09	-1.47	0.57	0.730961
5165	3R_DroMel_CAF1	13,557,837 – 13,557,957	- - - "knownCDS=Parent=FBtr0083509, FBtr0083510;Name=Fsh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7665-RA, FlyBase+Annotation+IDs:CG7665-RB" - - - - -	8440	13,557,837 – 13,557,957	+	6	120	77.61	-2.33	0.59	0.959751
5166	3R_DroMel_CAF1	13,562,360 – 13,562,457	- - - - - - - - -	8441	13,562,360 – 13,562,457	+	6	111	88.18	-1.93	0.84	0.709558
5167	3R_DroMel_CAF1	13,563,602 – 13,563,737	- - - - - - - - -	8442	13,563,602 – 13,563,706	-	4	118	76.15	-2.19	0.67	0.984203
5167	3R_DroMel_CAF1	13,563,602 – 13,563,737	- - - - - - - - -	8443	13,563,642 – 13,563,737	-	4	109	84.97	-1.80	0.63	0.581325
5168	3R_DroMel_CAF1	13,566,104 – 13,566,258	- - - - - - - - -	8444	13,566,104 – 13,566,218	+	5	117	89.58	-2.18	0.77	0.932129
				8445	13,566,144 – 13,566,258	+	5	117	85.33	-3.48	0.73	0.995526
				8446	13,566,144 – 13,566,258	-	5	117	85.33	-3.03	0.71	0.981945
5169	3R_DroMel_CAF1	13,566,719 – 13,566,836	- - - "knownCDS=Parent=FBtr0083512;Name=CG16766-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16766-RA" - - - - -	8447	13,566,719 – 13,566,836	+	6	120	78.67	-1.02	0.71	0.528744
5170	3R_DroMel_CAF1	13,568,340 – 13,568,430	- - - - - - - - -	8448	13,568,340 – 13,568,430	+	5	90	95.66	-1.99	0.85	0.974315
5170	3R_DroMel_CAF1	13,568,340 – 13,568,430	- - - - - - - - -	8449	13,568,340 – 13,568,430	-	5	90	95.66	-1.49	0.81	0.544776
5171	3R_DroMel_CAF1	13,568,575 – 13,568,682	- - - - - - - - -	8450	13,568,575 – 13,568,682	+	3	107	96.88	-1.78	0.95	0.720163
5172	3R_DroMel_CAF1	13,569,319 – 13,569,430	- - - - - - - - -	8451	13,569,319 – 13,569,430	-	3	120	64.08	-1.61	0.57	0.970741
5173	3R_DroMel_CAF1	13,571,275 – 13,571,372	- - - "knownCDS=Parent=FBtr0083512;Name=CG16766-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16766-RA" - - - - -	8452	13,571,275 – 13,571,372	+	6	103	82.10	-2.25	0.56	0.549139
5174	3R_DroMel_CAF1	13,572,756 – 13,572,848	- - - - - - - - -	8453	13,572,756 – 13,572,848	-	5	116	77.11	-2.08	0.44	0.836338
5175	3R_DroMel_CAF1	13,573,135 – 13,573,237	- - - - - - - - -	8454	13,573,135 – 13,573,237	+	6	120	82.41	-2.04	0.67	0.688587
5176	3R_DroMel_CAF1	13,573,307 – 13,573,420	- - - - - - - - -	8455	13,573,307 – 13,573,420	-	6	120	81.79	-2.20	0.59	0.668783
5177	3R_DroMel_CAF1	13,573,610 – 13,573,739	- - - - - - - - -	8456	13,573,610 – 13,573,715	-	4	110	78.53	-2.10	0.56	0.758120
5177	3R_DroMel_CAF1	13,573,610 – 13,573,739	- - - - - - - - -	8457	13,573,644 – 13,573,739	-	4	96	86.89	-1.52	0.67	0.515931
5178	3R_DroMel_CAF1	13,574,206 – 13,574,309	- - - - - - - - -	8458	13,574,206 – 13,574,309	+	4	111	82.55	-1.68	0.72	0.677451
5179	3R_DroMel_CAF1	13,574,632 – 13,574,742	- - - - - - - - -	8459	13,574,632 – 13,574,742	+	4	119	72.51	-2.17	0.48	0.818729
5179	3R_DroMel_CAF1	13,574,632 – 13,574,742	- - - - - - - - -	8460	13,574,632 – 13,574,742	-	4	119	72.51	-2.66	0.50	0.992837
5180	3R_DroMel_CAF1	13,575,185 – 13,575,282	- - - - - - - - -	8461	13,575,185 – 13,575,282	-	4	107	87.40	-1.75	0.65	0.531569
5181	3R_DroMel_CAF1	13,575,840 – 13,575,935	- - - - - - - - -	8462	13,575,840 – 13,575,935	-	5	95	96.38	-1.30	0.94	0.844796
5182	3R_DroMel_CAF1	13,576,597 – 13,576,689	- - - - - - - - -	8463	13,576,597 – 13,576,689	+	6	107	69.97	-2.23	0.31	0.883316
5183	3R_DroMel_CAF1	13,579,159 – 13,579,273	- - - - - - - - -	8464	13,579,159 – 13,579,273	-	3	120	91.11	-1.77	0.96	0.858248
5184	3R_DroMel_CAF1	13,580,708 – 13,580,828	- - - "knownCDS=Parent=FBtr0083532;Name=CG7431-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7431-RA" - - - - -	8465	13,580,708 – 13,580,828	+	6	120	80.78	-3.09	0.55	0.934852
5185	3R_DroMel_CAF1	13,587,617 – 13,587,714	- - - - - - - - -	8466	13,587,617 – 13,587,714	+	6	103	70.91	-1.68	0.47	0.686449
5185	3R_DroMel_CAF1	13,587,617 – 13,587,714	- - - - - - - - -	8467	13,587,617 – 13,587,714	-	6	103	70.91	-1.73	0.44	0.635706
5186	3R_DroMel_CAF1	13,590,907 – 13,591,001	- - - - - - - - -	8468	13,590,907 – 13,591,001	-	5	102	83.73	-1.61	0.68	0.500000
5187	3R_DroMel_CAF1	13,595,017 – 13,595,129	- - - - - - - - -	8469	13,595,017 – 13,595,129	-	4	113	85.42	-1.53	0.69	0.563162
5188	3R_DroMel_CAF1	13,596,411 – 13,596,521	- - - - - - - - -	8470	13,596,411 – 13,596,521	+	6	113	83.40	-1.97	0.69	0.592073
5189	3R_DroMel_CAF1	13,603,812 – 13,603,905	- - - "knownCDS=Parent=FBtr0083530;Name=CG14318-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14318-RA" - - - - -	8471	13,603,812 – 13,603,905	-	6	96	72.45	-1.47	0.54	0.539244
5190	3R_DroMel_CAF1	13,606,228 – 13,606,338	- - - "knownCDS=Parent=FBtr0083530;Name=CG14318-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14318-RA" - - - - -	8472	13,606,228 – 13,606,338	+	6	116	79.11	-1.39	0.73	0.780705
5190	3R_DroMel_CAF1	13,606,228 – 13,606,338		8473	13,606,228 – 13,606,338	-	6	116	79.11	-1.26	0.65	0.512618
5191	3R_DroMel_CAF1	13,612,177 – 13,612,268	- - - - - - - - -	8474	13,612,177 – 13,612,268	-	6	95	80.25	-2.10	0.60	0.801674
5192	3R_DroMel_CAF1	13,614,508 – 13,614,601	- - - - - - - - -	8475	13,614,508 – 13,614,601	+	6	118	80.12	-1.78	0.59	0.625954
5193	3R_DroMel_CAF1	13,615,563 – 13,615,655	- - - - - - - - -	8476	13,615,563 – 13,615,655	+	5	99	92.75	-1.35	0.83	0.617893
5194	3R_DroMel_CAF1	13,616,015 – 13,616,115	- - - - - - - - -	8477	13,616,015 – 13,616,115	-	6	120	87.00	-1.81	0.84	0.696927
5195	3R_DroMel_CAF1	13,617,802 – 13,617,893	- - - - - - - - -	8478	13,617,802 – 13,617,893	-	6	111	79.09	-2.20	0.45	0.520478
5196	3R_DroMel_CAF1	13,618,565 – 13,618,678	- - - - - - - - -	8479	13,618,565 – 13,618,678	+	5	113	88.45	-1.74	0.77	0.751977
5197	3R_DroMel_CAF1	13,618,738 – 13,618,870	- - - - - - - - -	8480	13,618,738 – 13,618,832	+	6	109	84.18	-2.33	0.71	0.634369
				8481	13,618,738 – 13,618,832	-	6	109	84.18	-1.57	0.76	0.500000
				8482	13,618,770 – 13,618,870	+	6	113	78.97	-2.19	0.75	0.951728
				8483	13,618,770 – 13,618,870	-	6	113	78.97	-1.30	0.68	0.657554
5198	3R_DroMel_CAF1	13,619,545 – 13,619,649	- - - - - - - - -	8484	13,619,545 – 13,619,649	-	5	107	93.24	-1.68	0.92	0.987092
5199	3R_DroMel_CAF1	13,619,717 – 13,619,819	- - - - - - - - -	8485	13,619,717 – 13,619,819	+	6	119	77.64	-3.11	0.60	0.991693
5199	3R_DroMel_CAF1	13,619,717 – 13,619,819	- - - - - - - - -	8486	13,619,717 – 13,619,819	-	6	119	77.64	-1.87	0.53	0.697237
5200	3R_DroMel_CAF1	13,621,407 – 13,621,567	- - - "knownCDS=Parent=FBtr0083513;Name=CG7713-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7713-RA" - - - - -	8487	13,621,407 – 13,621,503	+	6	113	72.39	-1.96	0.67	0.985343
5200	3R_DroMel_CAF1	13,621,407 – 13,621,567		8488	13,621,463 – 13,621,567	+	6	109	79.05	-1.76	0.56	0.571522
5201	3R_DroMel_CAF1	13,625,687 – 13,625,806	- - - "knownCDS=Parent=FBtr0083528;Name=CG17803-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17803-RA" - - - - -	8489	13,625,687 – 13,625,806	+	6	120	76.70	-2.16	0.50	0.867995
5202	3R_DroMel_CAF1	13,625,920 – 13,626,013	- - - "knownCDS=Parent=FBtr0083528;Name=CG17803-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17803-RA" - - - - -	8490	13,625,920 – 13,626,013	+	5	105	83.84	-1.83	0.66	0.611757
5203	3R_DroMel_CAF1	13,630,320 – 13,630,434	- - - "knownCDS=Parent=FBtr0083526;Name=CG17802-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17802-RA" - - - - -	8491	13,630,320 – 13,630,434	+	3	114	91.81	-2.59	0.80	0.771716
5204	3R_DroMel_CAF1	13,632,274 – 13,632,371	- - - "knownCDS=Parent=FBtr0083525;Name=CG17801-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17801-RA" - - - - -	8492	13,632,274 – 13,632,371	+	5	97	68.56	-1.95	0.28	0.741975
5205	3R_DroMel_CAF1	13,633,242 – 13,633,357	- - - - - - - - -	8493	13,633,242 – 13,633,357	-	5	120	78.58	-1.57	0.71	0.717898
5206	3R_DroMel_CAF1	13,634,542 – 13,634,662	- - - "knownCDS=Parent=FBtr0083524;Name=CG7357-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7357-RA" - - - - -	8494	13,634,542 – 13,634,662	+	6	120	80.39	-1.91	0.56	0.593398
5207	3R_DroMel_CAF1	13,636,325 – 13,636,445	- - - "knownCDS=Parent=FBtr0083523;Name=CG18012-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18012-RA" - - - - -	8495	13,636,325 – 13,636,445	+	6	120	76.83	-1.64	0.54	0.554412
5207	3R_DroMel_CAF1	13,636,325 – 13,636,445		8496	13,636,325 – 13,636,445	-	6	120	76.83	-2.31	0.42	0.790186
5208	3R_DroMel_CAF1	13,640,301 – 13,640,411	- - - - - - - - -	8497	13,640,301 – 13,640,411	+	6	120	77.13	-1.87	0.50	0.616024
5209	3R_DroMel_CAF1	13,641,486 – 13,641,587	- - - - - - - - -	8498	13,641,486 – 13,641,587	+	3	101	79.24	-1.04	0.91	0.911113
5210	3R_DroMel_CAF1	13,646,231 – 13,646,341	- - - - - - - - -	8499	13,646,231 – 13,646,341	+	6	115	80.37	-1.64	0.72	0.797671
5211	3R_DroMel_CAF1	13,646,829 – 13,646,944	- - - - - - - - -	8500	13,646,829 – 13,646,944	+	6	119	70.24	-2.36	0.28	0.898226
5211	3R_DroMel_CAF1	13,646,829 – 13,646,944	- - - - - - - - -	8501	13,646,829 – 13,646,944	-	6	119	70.24	-2.08	0.25	0.500000
5212	3R_DroMel_CAF1	13,649,060 – 13,649,169	- - - - - - - - -	8502	13,649,060 – 13,649,169	+	5	113	72.88	-1.79	0.47	0.701656
5213	3R_DroMel_CAF1	13,652,986 – 13,653,079	- - - - - - - - -	8503	13,652,986 – 13,653,079	-	3	94	88.73	-2.00	0.77	0.531352
5214	3R_DroMel_CAF1	13,654,739 – 13,654,866	- - - - - - - - -	8504	13,654,739 – 13,654,834	+	6	113	65.33	-2.43	0.38	0.982749
5214	3R_DroMel_CAF1	13,654,739 – 13,654,866	- - - - - - - - -	8505	13,654,766 – 13,654,866	+	6	120	71.17	-1.73	0.43	0.585482
5215	3R_DroMel_CAF1	13,656,656 – 13,656,765	- - - - - - - - -	8506	13,656,656 – 13,656,765	-	6	109	81.72	-2.04	0.65	0.740931
5216	3R_DroMel_CAF1	13,659,756 – 13,659,847	- - - - - - - - -	8507	13,659,756 – 13,659,847	-	6	100	87.35	-3.38	0.69	0.551103
5217	3R_DroMel_CAF1	13,660,322 – 13,660,532	- - - - - - - - -	8508	13,660,322 – 13,660,426	+	6	110	86.29	-2.79	0.71	0.510964
				8509	13,660,322 – 13,660,426	-	6	110	86.29	-4.84	0.73	0.974963
				8510	13,660,356 – 13,660,455	-	6	116	72.86	-2.96	0.65	0.996899
				8511	13,660,426 – 13,660,532	+	5	117	80.18	-2.22	0.56	0.869104
				8512	13,660,426 – 13,660,532	-	5	117	80.18	-2.05	0.50	0.649597
5218	3R_DroMel_CAF1	13,662,903 – 13,662,994	- - - "knownCDS=Parent=FBtr0083514;Name=CG31246-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31246-RA" - - - - -	8513	13,662,903 – 13,662,994	+	5	93	81.81	-1.86	0.61	0.607969
5218	3R_DroMel_CAF1	13,662,903 – 13,662,994		8514	13,662,903 – 13,662,994	-	5	93	81.81	-3.31	0.63	0.994841
5219	3R_DroMel_CAF1	13,664,083 – 13,664,173	- - - - - - - - -	8515	13,664,083 – 13,664,173	+	6	90	91.24	-2.08	0.92	0.993900
5219	3R_DroMel_CAF1	13,664,083 – 13,664,173	- - - - - - - - -	8516	13,664,083 – 13,664,173	-	6	90	91.24	-2.52	0.86	0.974359
5220	3R_DroMel_CAF1	13,665,794 – 13,665,894	- - - - - - - - -	8517	13,665,794 – 13,665,894	+	5	104	87.20	-2.81	0.60	0.572709
5221	3R_DroMel_CAF1	13,669,986 – 13,670,187	- - - - - - - - -	8518	13,669,986 – 13,670,087	+	6	113	80.76	-1.73	0.67	0.734564
5221	3R_DroMel_CAF1	13,669,986 – 13,670,187	- - - - - - - - -	8519	13,670,087 – 13,670,187	+	5	100	95.90	-1.46	0.87	0.801789
5222	3R_DroMel_CAF1	13,671,368 – 13,671,497	- - - - - - - - -	8520	13,671,368 – 13,671,458	+	4	108	80.78	-2.80	0.56	0.951952
				8521	13,671,368 – 13,671,458	-	4	108	80.78	-2.79	0.52	0.880349
				8522	13,671,396 – 13,671,497	+	4	119	82.99	-2.24	0.59	0.740385
5223	3R_DroMel_CAF1	13,673,084 – 13,673,179	- - - - - - - - -	8523	13,673,084 – 13,673,179	-	3	95	78.89	-1.50	0.79	0.784880
5224	3R_DroMel_CAF1	13,673,641 – 13,673,751	- - - - - - - - -	8524	13,673,641 – 13,673,751	+	3	118	81.27	-2.27	0.61	0.764249
5224	3R_DroMel_CAF1	13,673,641 – 13,673,751	- - - - - - - - -	8525	13,673,641 – 13,673,751	-	3	118	81.27	-1.92	0.68	0.755288
5225	3R_DroMel_CAF1	13,675,192 – 13,675,305	- - - - - - - - -	8526	13,675,192 – 13,675,305	-	3	113	94.10	-1.47	0.97	0.602709
5226	3R_DroMel_CAF1	13,675,391 – 13,675,489	- - - - - - - - -	8527	13,675,391 – 13,675,489	-	3	117	78.31	-3.00	0.63	0.997267
5227	3R_DroMel_CAF1	13,676,352 – 13,676,452	- - - - - - - - -	8528	13,676,352 – 13,676,452	+	3	100	95.33	-1.96	0.87	0.611494
5228	3R_DroMel_CAF1	13,677,021 – 13,677,135	- - - - - - - - -	8529	13,677,021 – 13,677,135	-	3	114	95.29	-2.35	0.81	0.606201
5229	3R_DroMel_CAF1	13,679,968 – 13,680,164	- - - - - - - - -	8530	13,679,968 – 13,680,070	-	6	108	72.58	-2.13	0.66	0.989635
				8531	13,680,070 – 13,680,164	+	5	100	79.57	-1.92	0.49	0.528961
				8532	13,680,070 – 13,680,164	-	5	100	79.57	-1.90	0.67	0.844039
5230	3R_DroMel_CAF1	13,680,606 – 13,680,703	- - - - - - - - -	8533	13,680,606 – 13,680,703	-	5	98	85.89	-1.94	0.74	0.796227
5231	3R_DroMel_CAF1	13,682,239 – 13,682,348	- - - - - - - - -	8534	13,682,239 – 13,682,348	-	6	109	88.13	-2.45	0.77	0.541493
5232	3R_DroMel_CAF1	13,682,361 – 13,682,608	- - - - - - - - -	8535	13,682,361 – 13,682,467	+	5	107	89.55	-1.33	0.85	0.568181
				8536	13,682,400 – 13,682,492	+	5	93	93.55	-2.76	0.91	0.999913
				8537	13,682,400 – 13,682,492	-	5	93	93.55	-1.62	0.89	0.963181
				8538	13,682,492 – 13,682,608	-	5	116	91.03	-1.72	0.73	0.500000
5233	3R_DroMel_CAF1	13,683,272 – 13,683,362	- - - - - - - - -	8539	13,683,272 – 13,683,362	+	6	117	82.42	-2.47	0.69	0.815947
5234	3R_DroMel_CAF1	13,684,115 – 13,684,232	- - - - - - - - -	8540	13,684,115 – 13,684,232	+	5	117	82.01	-1.84	0.59	0.543149
5235	3R_DroMel_CAF1	13,684,541 – 13,684,645	- - - - - - - - -	8541	13,684,541 – 13,684,645	-	5	104	91.06	-2.39	0.83	0.992686
5236	3R_DroMel_CAF1	13,687,518 – 13,687,637	- - - - - - - - -	8542	13,687,518 – 13,687,637	+	4	119	83.84	-1.79	0.75	0.772603
5236	3R_DroMel_CAF1	13,687,518 – 13,687,637	- - - - - - - - -	8543	13,687,518 – 13,687,637	-	4	119	83.84	-1.72	0.82	0.768937
5237	3R_DroMel_CAF1	13,688,299 – 13,688,404	- - - - - - - - -	8544	13,688,299 – 13,688,404	+	5	120	92.58	-2.22	0.79	0.958563
5238	3R_DroMel_CAF1	13,691,597 – 13,691,717	- - - "knownCDS=Parent=FBtr0089770, FBtr0089771, FBtr0089772;Name=tinc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31247-RC, FlyBase+Annotation+IDs:CG31247-RA, FlyBase+Annotation+IDs:CG31247-RB" - - - - -	8545	13,691,597 – 13,691,717	+	5	120	95.67	-1.21	0.91	0.668415
5239	3R_DroMel_CAF1	13,692,597 – 13,692,797	- - - "knownCDS=Parent=FBtr0089772;Name=tinc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31247-RB" - - - - -	8546	13,692,597 – 13,692,717	+	5	120	97.50	-1.10	0.96	0.500000
				8547	13,692,637 – 13,692,757	+	5	120	96.92	-1.94	0.96	0.998031
				8548	13,692,637 – 13,692,757	-	5	120	96.92	-1.76	0.94	0.990399
				8549	13,692,677 – 13,692,797	+	5	120	96.25	-2.33	0.99	0.999892
				8550	13,692,677 – 13,692,797	-	5	120	96.25	-2.26	0.89	0.997343
5240	3R_DroMel_CAF1	13,692,877 – 13,692,997	- - - "knownCDS=Parent=FBtr0089770;Name=tinc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31247-RC" - - - - -	8551	13,692,877 – 13,692,997	+	5	120	93.43	-2.32	0.85	0.996446
5240	3R_DroMel_CAF1	13,692,877 – 13,692,997		8552	13,692,877 – 13,692,997	-	5	120	93.43	-1.69	0.88	0.968003
5241	3R_DroMel_CAF1	13,693,312 – 13,693,467	- - - - - - - - -	8553	13,693,312 – 13,693,432	-	5	120	96.50	-1.87	0.88	0.977206
5241	3R_DroMel_CAF1	13,693,312 – 13,693,467	- - - - - - - - -	8554	13,693,352 – 13,693,467	-	5	120	94.77	-1.47	0.86	0.808873
5242	3R_DroMel_CAF1	13,693,960 – 13,694,061	- - - - - - - - -	8555	13,693,960 – 13,694,061	-	3	101	88.59	-2.69	0.68	0.649412
5243	3R_DroMel_CAF1	13,694,300 – 13,694,420	- - - "knownCDS=Parent=FBtr0089771;Name=tinc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31247-RA" - - - - -	8556	13,694,300 – 13,694,420	+	5	120	96.50	-1.85	0.96	0.996669
5244	3R_DroMel_CAF1	13,695,188 – 13,695,401	- - - - - - - - -	8557	13,695,188 – 13,695,297	-	4	109	98.62	-3.09	0.89	0.853141
				8558	13,695,217 – 13,695,337	+	5	120	90.75	-2.91	0.87	0.999724
				8559	13,695,217 – 13,695,337	-	5	120	90.75	-3.46	0.82	0.999279
				8560	13,695,257 – 13,695,370	-	5	120	89.94	-1.85	0.89	0.980070
				8561	13,695,297 – 13,695,401	+	5	120	81.96	-2.32	0.73	0.953862
				8562	13,695,297 – 13,695,401	-	5	120	81.96	-2.37	0.90	0.987562
5245	3R_DroMel_CAF1	13,695,481 – 13,695,601	- - - - - - - - -	8563	13,695,481 – 13,695,601	-	5	120	97.33	-1.96	0.96	0.997473
5246	3R_DroMel_CAF1	13,695,999 – 13,696,239	- - - "knownCDS=Parent=FBtr0089771;Name=tinc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31247-RA" - - - - -	8564	13,695,999 – 13,696,119	+	5	120	96.00	-1.78	0.92	0.990618
				8565	13,696,039 – 13,696,159	+	5	120	93.17	-3.07	0.86	0.999636
				8566	13,696,039 – 13,696,159	-	5	120	93.17	-1.26	0.85	0.584863
				8567	13,696,119 – 13,696,239	-	5	120	92.92	-1.67	0.79	0.710122
5247	3R_DroMel_CAF1	13,696,319 – 13,696,439	- - "RNAmicro=f:13696319_t:13696438_strand:-_p:0.609974" "knownCDS=Parent=FBtr0089771;Name=tinc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31247-RA" - - - - -	8568	13,696,319 – 13,696,439	+	5	120	97.50	-1.61	0.93	0.959967
5247	3R_DroMel_CAF1	13,696,319 – 13,696,439		8569	13,696,319 – 13,696,439	-	5	120	97.50	-1.61	0.93	0.957132
5248	3R_DroMel_CAF1	13,696,559 – 13,696,667	- - - - - - - - -	8570	13,696,559 – 13,696,667	+	5	120	80.73	-2.88	0.56	0.984375
5249	3R_DroMel_CAF1	13,696,980 – 13,697,100	- - - - - - - - -	8571	13,696,980 – 13,697,100	+	5	120	97.33	-2.03	0.94	0.997475
5250	3R_DroMel_CAF1	13,697,412 – 13,697,554	- - - - - - - - -	8572	13,697,412 – 13,697,532	-	5	120	95.58	-1.43	0.91	0.905035
5250	3R_DroMel_CAF1	13,697,412 – 13,697,554	- - - - - - - - -	8573	13,697,452 – 13,697,554	-	5	120	83.33	-1.83	0.67	0.661163
5251	3R_DroMel_CAF1	13,699,346 – 13,699,466	- - - - - - - - -	8574	13,699,346 – 13,699,466	-	5	120	98.33	-1.16	1.00	0.633913
5252	3R_DroMel_CAF1	13,700,888 – 13,700,992	- - - - - - - - -	8575	13,700,888 – 13,700,992	+	5	106	94.67	-1.07	0.98	0.667514
5253	3R_DroMel_CAF1	13,701,468 – 13,701,585	- - - - - - - - -	8576	13,701,468 – 13,701,558	-	6	97	88.51	-1.99	0.95	0.992404
5253	3R_DroMel_CAF1	13,701,468 – 13,701,585	- - - - - - - - -	8577	13,701,494 – 13,701,585	-	6	92	85.77	-1.55	0.85	0.571933
5254	3R_DroMel_CAF1	13,706,235 – 13,706,331	- - - - - - - - -	8578	13,706,235 – 13,706,331	+	4	96	92.71	-2.39	0.86	0.956263
5254	3R_DroMel_CAF1	13,706,235 – 13,706,331	- - - - - - - - -	8579	13,706,235 – 13,706,331	-	4	96	92.71	-2.81	0.85	0.974746
5255	3R_DroMel_CAF1	13,710,166 – 13,710,274	- - - "knownCDS=Parent=FBtr0091514;Name=Rim-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33547-RA" - - - - -	8580	13,710,166 – 13,710,274	+	6	114	82.48	-2.23	0.67	0.740774
5255	3R_DroMel_CAF1	13,710,166 – 13,710,274		8581	13,710,166 – 13,710,274	-	6	114	82.48	-1.94	0.69	0.685768
5256	3R_DroMel_CAF1	13,710,509 – 13,710,612	- - - - - - - - -	8582	13,710,509 – 13,710,612	+	4	105	92.31	-1.96	0.83	0.834637
5257	3R_DroMel_CAF1	13,713,204 – 13,713,294	- - - - - - - - -	8583	13,713,204 – 13,713,294	-	6	103	77.49	-1.37	0.63	0.631580
5258	3R_DroMel_CAF1	13,714,934 – 13,715,024	- - - - - - - - -	8584	13,714,934 – 13,715,024	-	4	95	76.92	-1.79	0.66	0.818152
5259	3R_DroMel_CAF1	13,715,789 – 13,715,905	- - "RNAmicro=f:13715789_t:13715908_strand:+_p:0.627188" - - - - - -	8585	13,715,789 – 13,715,905	+	5	120	68.62	-3.49	0.41	0.999826
5259	3R_DroMel_CAF1	13,715,789 – 13,715,905		8586	13,715,789 – 13,715,905	-	5	120	68.62	-3.32	0.61	0.999764
5260	3R_DroMel_CAF1	13,724,423 – 13,724,536	- - - - - - - - -	8587	13,724,423 – 13,724,536	+	3	113	94.69	-2.49	0.91	0.920374
5261	3R_DroMel_CAF1	13,725,989 – 13,726,080	- - - - - - - - -	8588	13,725,989 – 13,726,080	-	6	91	80.12	-2.09	0.58	0.768184
5262	3R_DroMel_CAF1	13,727,103 – 13,727,195	- - - "knownCDS=Parent=FBtr0091514;Name=Rim-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33547-RA" - - - - -	8589	13,727,103 – 13,727,195	-	6	108	81.93	-1.99	0.72	0.787298
5263	3R_DroMel_CAF1	13,728,529 – 13,728,623	- - - - - - - - -	8590	13,728,529 – 13,728,623	-	4	94	88.65	-1.35	0.94	0.649615
5264	3R_DroMel_CAF1	13,728,663 – 13,728,792	- - - - - - - - -	8591	13,728,663 – 13,728,756	+	6	117	74.57	-1.55	0.55	0.616443
				8592	13,728,687 – 13,728,792	+	6	120	82.48	-1.39	0.73	0.531431
				8593	13,728,687 – 13,728,792	-	6	120	82.48	-2.18	0.94	0.967216
5265	3R_DroMel_CAF1	13,729,991 – 13,730,091	- - - - - - - - -	8594	13,729,991 – 13,730,091	+	4	100	92.42	-1.44	0.83	0.500000
5266	3R_DroMel_CAF1	13,730,836 – 13,730,927	- - - "knownCDS=Parent=FBtr0091514;Name=Rim-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33547-RA" - - - - -	8595	13,730,836 – 13,730,927	-	6	103	80.35	-2.19	0.56	0.750456
5267	3R_DroMel_CAF1	13,734,608 – 13,734,698	- - - - - - - - -	8596	13,734,608 – 13,734,698	-	5	90	86.99	-1.53	0.94	0.837530
5268	3R_DroMel_CAF1	13,738,351 – 13,738,450	- - - - - - - - -	8597	13,738,351 – 13,738,450	+	6	103	83.95	-2.95	0.61	0.633016
5269	3R_DroMel_CAF1	13,739,788 – 13,739,889	- - - - - - - - -	8598	13,739,788 – 13,739,889	+	6	110	71.08	-2.32	0.38	0.961794
5269	3R_DroMel_CAF1	13,739,788 – 13,739,889	- - - - - - - - -	8599	13,739,788 – 13,739,889	-	6	110	71.08	-1.74	0.48	0.776727
5270	3R_DroMel_CAF1	13,743,735 – 13,743,838	- - - - - - - - -	8600	13,743,735 – 13,743,838	+	3	112	88.02	-1.65	0.89	0.680104
5271	3R_DroMel_CAF1	13,747,797 – 13,747,893	- - - - - - - - -	8601	13,747,797 – 13,747,893	+	4	97	79.49	-2.57	0.52	0.861725
5272	3R_DroMel_CAF1	13,750,963 – 13,751,057	- - - - - - - - -	8602	13,750,963 – 13,751,057	-	5	105	80.78	-1.33	0.89	0.573898
5273	3R_DroMel_CAF1	13,758,464 – 13,758,654	- - - - - - - - -	8603	13,758,464 – 13,758,563	+	5	118	68.62	-2.89	0.56	0.999500
				8604	13,758,464 – 13,758,563	-	5	118	68.62	-2.55	0.62	0.998622
				8605	13,758,502 – 13,758,601	-	4	120	72.33	-2.73	0.37	0.778980
				8606	13,758,563 – 13,758,654	+	5	93	80.41	-1.72	0.66	0.657004
5274	3R_DroMel_CAF1	13,759,938 – 13,760,035	- - - - - - - - -	8607	13,759,938 – 13,760,035	-	6	110	71.88	-1.76	0.43	0.597591
5275	3R_DroMel_CAF1	13,763,623 – 13,763,750	- - - - - - - - -	8608	13,763,623 – 13,763,723	-	5	100	95.60	-1.88	0.92	0.994719
5275	3R_DroMel_CAF1	13,763,623 – 13,763,750	- - - - - - - - -	8609	13,763,649 – 13,763,750	-	5	107	88.49	-1.90	0.75	0.791737
5276	3R_DroMel_CAF1	13,766,740 – 13,766,834	- - - - - - - - -	8610	13,766,740 – 13,766,834	+	5	105	72.48	-1.96	0.37	0.882926
5277	3R_DroMel_CAF1	13,767,329 – 13,767,421	- - - - - - - - -	8611	13,767,329 – 13,767,421	-	6	92	92.83	-1.40	0.92	0.885047
5278	3R_DroMel_CAF1	13,771,043 – 13,771,171	- - - - - - - - -	8612	13,771,043 – 13,771,139	-	6	104	77.20	-1.68	0.68	0.910183
5278	3R_DroMel_CAF1	13,771,043 – 13,771,171	- - - - - - - - -	8613	13,771,076 – 13,771,171	-	6	113	77.23	-1.04	0.70	0.582054
5279	3R_DroMel_CAF1	13,771,200 – 13,771,322	- - - - - - - - -	8614	13,771,200 – 13,771,292	+	6	101	78.40	-1.89	0.71	0.930583
				8615	13,771,200 – 13,771,292	-	6	101	78.40	-1.46	0.63	0.638296
				8616	13,771,226 – 13,771,322	+	6	104	80.61	-1.89	0.67	0.809442
				8617	13,771,226 – 13,771,322	-	6	104	80.61	-2.48	0.60	0.884288
5280	3R_DroMel_CAF1	13,775,025 – 13,775,127	- - - - - - - - -	8618	13,775,025 – 13,775,127	-	6	107	79.55	-1.80	0.79	0.904382
5281	3R_DroMel_CAF1	13,777,675 – 13,777,781	- - - - - - - - -	8619	13,777,675 – 13,777,781	+	5	120	67.81	-2.03	0.27	0.764545
5282	3R_DroMel_CAF1	13,782,477 – 13,782,572	- - - - - - - - -	8620	13,782,477 – 13,782,572	-	6	101	78.07	-1.67	0.60	0.732481
5283	3R_DroMel_CAF1	13,787,830 – 13,787,927	- - - - - - - - -	8621	13,787,830 – 13,787,927	+	4	110	65.01	-0.75	0.71	0.579203
5284	3R_DroMel_CAF1	13,799,746 – 13,799,852	- - - - - - - - -	8622	13,799,746 – 13,799,852	-	4	112	89.88	-1.74	0.84	0.803297
5285	3R_DroMel_CAF1	13,801,488 – 13,801,584	- - - - - - - - -	8623	13,801,488 – 13,801,584	+	6	99	80.58	-1.32	0.65	0.500000
5286	3R_DroMel_CAF1	13,806,528 – 13,806,629	- - - - - - - - -	8624	13,806,528 – 13,806,629	-	4	109	75.84	-2.37	0.50	0.888729
5287	3R_DroMel_CAF1	13,807,917 – 13,808,009	- - - - - - - - -	8625	13,807,917 – 13,808,009	+	6	102	71.89	-2.16	0.28	0.628007
5288	3R_DroMel_CAF1	13,811,265 – 13,811,395	- - - - - - - - -	8626	13,811,265 – 13,811,366	+	6	110	77.60	-2.18	0.43	0.616331
				8627	13,811,265 – 13,811,366	-	6	110	77.60	-1.86	0.52	0.647343
				8628	13,811,305 – 13,811,395	-	6	100	76.32	-1.72	0.51	0.514588
5289	3R_DroMel_CAF1	13,813,747 – 13,813,841	- - - - - - - - -	8629	13,813,747 – 13,813,841	-	6	107	67.48	-2.22	0.29	0.859515
5290	3R_DroMel_CAF1	13,816,962 – 13,817,052	- - - - - - - - -	8630	13,816,962 – 13,817,052	+	4	90	85.49	-1.83	0.70	0.740897
5291	3R_DroMel_CAF1	13,820,099 – 13,820,216	- - - - - - - - -	8631	13,820,099 – 13,820,216	+	5	117	96.04	-3.02	0.86	0.999091
5292	3R_DroMel_CAF1	13,820,251 – 13,820,394	- - - - - - - - -	8632	13,820,251 – 13,820,360	+	6	110	87.05	-2.30	0.92	0.987305
5292	3R_DroMel_CAF1	13,820,251 – 13,820,394	- - - - - - - - -	8633	13,820,289 – 13,820,394	+	6	105	96.44	-1.37	0.87	0.564400
5293	3R_DroMel_CAF1	13,820,796 – 13,820,890	- - - - - - - - -	8634	13,820,796 – 13,820,890	+	5	102	73.53	-2.55	0.37	0.996413
5294	3R_DroMel_CAF1	13,820,929 – 13,821,033	- - - - - - - - -	8635	13,820,929 – 13,821,033	+	5	111	89.61	-2.20	0.81	0.971317
5294	3R_DroMel_CAF1	13,820,929 – 13,821,033	- - - - - - - - -	8636	13,820,929 – 13,821,033	-	5	111	89.61	-3.12	0.70	0.915468
5295	3R_DroMel_CAF1	13,821,725 – 13,821,815	- - - - - - - - -	8637	13,821,725 – 13,821,815	-	6	102	75.28	-2.72	0.23	0.687619
5296	3R_DroMel_CAF1	13,822,438 – 13,822,546	- - - - - - - - -	8638	13,822,438 – 13,822,546	+	6	113	81.03	-1.75	0.77	0.817050
5297	3R_DroMel_CAF1	13,823,970 – 13,824,066	- - - - - - - - -	8639	13,823,970 – 13,824,066	+	6	113	72.92	-2.46	0.38	0.965111
5297	3R_DroMel_CAF1	13,823,970 – 13,824,066	- - - - - - - - -	8640	13,823,970 – 13,824,066	-	6	113	72.92	-2.07	0.62	0.983289
5298	3R_DroMel_CAF1	13,827,986 – 13,828,081	- - - - - - - - -	8641	13,827,986 – 13,828,081	+	6	95	80.86	-3.69	0.61	0.971367
5298	3R_DroMel_CAF1	13,827,986 – 13,828,081	- - - - - - - - -	8642	13,827,986 – 13,828,081	-	6	95	80.86	-1.98	0.78	0.884548
5299	3R_DroMel_CAF1	13,829,683 – 13,829,781	- - - - - - - - -	8643	13,829,683 – 13,829,781	+	5	104	88.94	-1.97	0.73	0.738251
5300	3R_DroMel_CAF1	13,834,496 – 13,834,723	- - - "knownCDS=Parent=FBtr0083535, FBtr0083537;Name=cpo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31243-RE, FlyBase+Annotation+IDs:CG31243-RB" - - - - -	8644	13,834,496 – 13,834,603	-	6	107	89.08	-1.41	0.91	0.754968
				8645	13,834,529 – 13,834,643	+	6	120	86.46	-1.69	0.92	0.893881
				8646	13,834,529 – 13,834,643	-	6	120	86.46	-1.26	0.94	0.638363
				8647	13,834,563 – 13,834,683	+	6	120	98.39	-0.68	0.99	0.649877
				8648	13,834,603 – 13,834,723	+	6	120	99.17	-0.81	0.98	0.704834
5301	3R_DroMel_CAF1	13,835,780 – 13,835,884	- - - - - - - - -	8649	13,835,780 – 13,835,884	+	6	115	84.96	-1.91	0.76	0.551126
5301	3R_DroMel_CAF1	13,835,780 – 13,835,884	- - - - - - - - -	8650	13,835,780 – 13,835,884	-	6	115	84.96	-2.63	0.82	0.904942
5302	3R_DroMel_CAF1	13,837,301 – 13,837,400	- - - - - - - - -	8651	13,837,301 – 13,837,400	-	6	99	96.84	-1.83	0.91	0.979848
5303	3R_DroMel_CAF1	13,850,856 – 13,850,976	- - - "knownCDS=Parent=FBtr0083540;Name=CG7794-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7794-RA" - - - - -	8652	13,850,856 – 13,850,976	+	6	120	82.89	-1.76	0.70	0.609659
5304	3R_DroMel_CAF1	13,854,594 – 13,854,742	- - - - - - - - -	8653	13,854,594 – 13,854,684	+	4	95	86.59	-1.45	0.73	0.547957
				8654	13,854,609 – 13,854,724	+	6	120	77.17	-2.05	0.49	0.752179
				8655	13,854,649 – 13,854,742	+	6	98	78.00	-1.74	0.59	0.761144
				8656	13,854,649 – 13,854,742	-	6	98	78.00	-1.40	0.66	0.710353
5305	3R_DroMel_CAF1	13,855,353 – 13,855,457	- - - - - - - - -	8657	13,855,353 – 13,855,457	+	6	104	82.07	-2.24	0.58	0.605385
5306	3R_DroMel_CAF1	13,857,439 – 13,857,559	- - - - - - - - -	8658	13,857,439 – 13,857,559	+	5	120	91.36	-1.40	0.82	0.618488
5307	3R_DroMel_CAF1	13,866,891 – 13,866,988	- - - - - - - - -	8659	13,866,891 – 13,866,988	-	6	105	79.38	-2.56	0.47	0.827155
5308	3R_DroMel_CAF1	13,869,881 – 13,869,993	- - - - - - - - -	8660	13,869,881 – 13,869,993	-	4	112	90.33	-1.41	0.86	0.577080
5309	3R_DroMel_CAF1	13,870,352 – 13,870,454	- - - - - - - - -	8661	13,870,352 – 13,870,454	+	6	109	75.62	-1.64	0.52	0.544553
5310	3R_DroMel_CAF1	13,880,009 – 13,880,115	- - - - - - - - -	8662	13,880,009 – 13,880,115	-	5	115	82.64	-2.07	0.64	0.774185
5311	3R_DroMel_CAF1	13,883,601 – 13,883,694	- - - - - - - - -	8663	13,883,601 – 13,883,694	+	6	100	77.84	-1.44	0.61	0.580688
5312	3R_DroMel_CAF1	13,889,200 – 13,889,295	- - - - - - - - -	8664	13,889,200 – 13,889,295	-	5	111	81.85	-2.08	0.72	0.899635
5313	3R_DroMel_CAF1	13,893,428 – 13,893,546	- - - - - - - - -	8665	13,893,428 – 13,893,546	+	6	120	81.06	-2.17	0.80	0.912187
5314	3R_DroMel_CAF1	13,900,907 – 13,901,050	- - - - - - - - -	8666	13,900,907 – 13,900,997	+	3	91	65.91	-2.84	0.44	0.994104
				8667	13,900,907 – 13,900,997	-	3	91	65.91	-2.92	0.41	0.976572
				8668	13,900,959 – 13,901,050	-	5	95	80.77	-2.07	0.67	0.883668
5315	3R_DroMel_CAF1	13,904,803 – 13,904,893	- - - - - - - - -	8669	13,904,803 – 13,904,893	-	5	90	91.67	-1.87	0.85	0.967524
5316	3R_DroMel_CAF1	13,911,477 – 13,911,571	- - - - - - - - -	8670	13,911,477 – 13,911,571	+	6	103	86.03	-2.06	0.77	0.566085
5317	3R_DroMel_CAF1	13,911,765 – 13,911,855	- - - - - - - - -	8671	13,911,765 – 13,911,855	-	6	92	93.31	-2.33	0.85	0.950564
5318	3R_DroMel_CAF1	13,917,747 – 13,917,865	- - - - - - - - -	8672	13,917,747 – 13,917,865	+	5	120	91.49	-1.72	0.74	0.523299
5319	3R_DroMel_CAF1	13,922,562 – 13,922,656	- - - "knownCDS=Parent=FBtr0083542;Name=sr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7847-RA" - - - - -	8673	13,922,562 – 13,922,656	-	6	106	76.61	-1.32	0.61	0.519241
5320	3R_DroMel_CAF1	13,923,743 – 13,923,836	- - - - - - - - -	8674	13,923,743 – 13,923,836	+	6	93	93.19	-2.09	0.83	0.759427
5321	3R_DroMel_CAF1	13,931,209 – 13,931,304	- - - - - - - - -	8675	13,931,209 – 13,931,304	-	6	106	91.54	-1.18	0.92	0.691415
5322	3R_DroMel_CAF1	13,934,698 – 13,934,804	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000241;Name=Dmel_Gly_TCC_14000241;TFAMID=DmelGTCC-13934715" "tRNAscan=type:Gly:anticodon:TCC f:13934714_t:13934801_strand=+_cove=76.96" - - "Rfam=AC007803.7/2169-2240_RF00005;tRNA;\|5e-30" - - - "Flybase=FBgn0051242:CR31242:cytosolic_tRNA_gene\|1e-36"	8676	13,934,698 – 13,934,804	+	6	120	86.48	-1.29	0.99	0.847772
5322	3R_DroMel_CAF1	13,934,698 – 13,934,804		8677	13,934,698 – 13,934,804	-	6	120	86.48	-2.26	0.95	0.993421
5323	3R_DroMel_CAF1	13,943,556 – 13,943,650	- - - - - - - - -	8678	13,943,556 – 13,943,650	-	6	95	92.16	-2.19	0.82	0.699569
5324	3R_DroMel_CAF1	13,949,941 – 13,950,034	- - - - - - - - -	8679	13,949,941 – 13,950,034	+	6	105	84.68	-1.58	0.87	0.687335
5325	3R_DroMel_CAF1	13,953,296 – 13,953,387	- - - "knownCDS=Parent=FBtr0083543;Name=sr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7847-RB" - - - - -	8680	13,953,296 – 13,953,387	+	6	104	77.04	-1.43	0.75	0.897999
5326	3R_DroMel_CAF1	13,957,495 – 13,957,652	- - - "knownCDS=Parent=FBtr0083542;Name=sr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7847-RA" - - - - -	8681	13,957,495 – 13,957,612	+	5	117	70.59	-1.61	0.53	0.625666
				8682	13,957,495 – 13,957,612	-	5	117	70.59	-2.34	0.46	0.992379
				8683	13,957,535 – 13,957,652	-	5	117	73.36	-1.60	0.62	0.770736
5327	3R_DroMel_CAF1	13,959,150 – 13,959,245	- - - - - - - - -	8684	13,959,150 – 13,959,245	+	5	110	74.77	-2.38	0.44	0.987440
5328	3R_DroMel_CAF1	13,959,685 – 13,959,776	- - - - - - - - -	8685	13,959,685 – 13,959,776	+	5	108	76.25	-2.62	0.70	0.997648
5328	3R_DroMel_CAF1	13,959,685 – 13,959,776	- - - - - - - - -	8686	13,959,685 – 13,959,776	-	5	108	76.25	-1.95	0.59	0.889871
5329	3R_DroMel_CAF1	13,961,670 – 13,961,768	- - - - - - - - -	8687	13,961,670 – 13,961,768	-	3	102	80.60	-2.37	0.81	0.981788
5330	3R_DroMel_CAF1	13,969,808 – 13,969,911	- - - - - - - - -	8688	13,969,808 – 13,969,911	+	6	120	80.59	-1.46	0.63	0.522707
5330	3R_DroMel_CAF1	13,969,808 – 13,969,911	- - - - - - - - -	8689	13,969,808 – 13,969,911	-	6	120	80.59	-1.53	0.63	0.571271
5331	3R_DroMel_CAF1	13,973,859 – 13,973,981	- - - - - - - - -	8690	13,973,859 – 13,973,952	-	6	106	78.23	-1.57	0.66	0.795764
5331	3R_DroMel_CAF1	13,973,859 – 13,973,981	- - - - - - - - -	8691	13,973,886 – 13,973,981	-	6	108	83.80	-2.30	0.85	0.914995
5332	3R_DroMel_CAF1	13,974,586 – 13,974,677	- - - - - - - - -	8692	13,974,586 – 13,974,677	+	6	104	70.68	-1.91	0.34	0.588033
5333	3R_DroMel_CAF1	13,979,544 – 13,979,710	- - - - - - - - -	8693	13,979,544 – 13,979,638	-	6	105	81.97	-1.67	0.66	0.598337
5333	3R_DroMel_CAF1	13,979,544 – 13,979,710	- - - - - - - - -	8694	13,979,603 – 13,979,710	+	5	107	84.19	-2.07	0.65	0.715705
5334	3R_DroMel_CAF1	13,981,809 – 13,981,940	- - - - - - - - -	8695	13,981,809 – 13,981,911	+	3	102	78.03	-1.91	0.59	0.646620
				8696	13,981,838 – 13,981,940	+	3	102	79.34	-1.82	0.72	0.863859
				8697	13,981,838 – 13,981,940	-	3	102	79.34	-2.21	0.72	0.967107
5335	3R_DroMel_CAF1	13,982,003 – 13,982,114	- - - - - - - - -	8698	13,982,003 – 13,982,114	-	6	112	81.49	-1.61	0.64	0.566798
5336	3R_DroMel_CAF1	13,999,725 – 13,999,825	- - - "knownCDS=Parent=FBtr0083555, FBtr0083556;Name=PP2A-B'-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7913-RA, FlyBase+Annotation+IDs:CG7913-RB" - - - - -	8699	13,999,725 – 13,999,825	+	6	100	67.27	-1.87	0.34	0.684557
5337	3R_DroMel_CAF1	14,000,268 – 14,000,360	- - - "knownCDS=Parent=FBtr0083555, FBtr0083556;Name=PP2A-B'-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7913-RA, FlyBase+Annotation+IDs:CG7913-RB" - - - - -	8700	14,000,268 – 14,000,360	+	4	95	93.05	-1.58	0.85	0.641234
5337	3R_DroMel_CAF1	14,000,268 – 14,000,360		8701	14,000,268 – 14,000,360	-	4	95	93.05	-2.70	0.87	0.978001
5338	3R_DroMel_CAF1	14,010,490 – 14,010,610	- - - "knownCDS=Parent=FBtr0083618, FBtr0083617;Name=CG7208-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7208-RB, FlyBase+Annotation+IDs:CG7208-RA" - - - - -	8702	14,010,490 – 14,010,610	+	5	120	84.58	-1.73	0.77	0.705478
5339	3R_DroMel_CAF1	14,014,349 – 14,014,465	- - - - - - - - -	8703	14,014,349 – 14,014,465	+	5	116	90.43	-1.73	0.73	0.548643
5340	3R_DroMel_CAF1	14,014,976 – 14,015,093	- - - - - - - - -	8704	14,014,976 – 14,015,093	-	6	120	75.94	-1.45	0.68	0.864513
5341	3R_DroMel_CAF1	14,017,919 – 14,018,016	- - - - - - - - -	8705	14,017,919 – 14,018,016	+	6	98	82.86	-2.20	0.61	0.562753
5342	3R_DroMel_CAF1	14,020,100 – 14,020,247	- - "RNAmicro=f:14020127_t:14020246_strand:+_p:0.994129" - - - - - -	8706	14,020,100 – 14,020,207	-	5	107	82.08	-2.69	0.87	0.995073
5342	3R_DroMel_CAF1	14,020,100 – 14,020,247		8707	14,020,127 – 14,020,247	-	5	120	86.82	-3.62	0.92	0.999920
5343	3R_DroMel_CAF1	14,020,690 – 14,020,852	- - - - - - - - -	8708	14,020,690 – 14,020,791	-	6	105	93.42	-1.46	0.87	0.626185
5343	3R_DroMel_CAF1	14,020,690 – 14,020,852	- - - - - - - - -	8709	14,020,754 – 14,020,852	-	6	104	81.96	-2.35	0.66	0.804213
5344	3R_DroMel_CAF1	14,021,402 – 14,021,556	- - - "knownCDS=Parent=FBtr0083613;Name=Ssdp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7187-RC" - - - - -	8710	14,021,402 – 14,021,516	+	6	120	78.31	-1.59	0.60	0.664088
5344	3R_DroMel_CAF1	14,021,402 – 14,021,556		8711	14,021,442 – 14,021,556	-	6	120	82.53	-1.70	0.64	0.500000
5345	3R_DroMel_CAF1	14,021,827 – 14,021,932	- - - "knownCDS=Parent=FBtr0083613;Name=Ssdp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7187-RC" - - - - -	8712	14,021,827 – 14,021,932	+	6	120	79.94	-2.00	0.57	0.713590
5346	3R_DroMel_CAF1	14,022,012 – 14,022,132	- - - "knownCDS=Parent=FBtr0083613;Name=Ssdp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7187-RC" - - - - -	8713	14,022,012 – 14,022,132	-	6	120	89.11	-1.41	0.88	0.581772
5347	3R_DroMel_CAF1	14,022,920 – 14,023,064	- - - - - - - - -	8714	14,022,920 – 14,023,031	+	5	112	95.89	-1.41	0.93	0.921048
5347	3R_DroMel_CAF1	14,022,920 – 14,023,064	- - - - - - - - -	8715	14,022,953 – 14,023,064	+	6	112	84.75	-2.76	0.72	0.709240
5348	3R_DroMel_CAF1	14,023,549 – 14,023,668	- - - - - - - - -	8716	14,023,549 – 14,023,647	+	5	98	93.67	-2.04	0.90	0.997697
				8717	14,023,549 – 14,023,647	-	5	98	93.67	-1.52	0.80	0.646460
				8718	14,023,571 – 14,023,668	+	5	97	95.05	-1.77	0.90	0.986872
				8719	14,023,571 – 14,023,668	-	5	97	95.05	-3.23	0.91	0.999933
5349	3R_DroMel_CAF1	14,025,755 – 14,025,849	- - - - - - - - -	8720	14,025,755 – 14,025,849	+	5	97	90.76	-2.05	0.72	0.642934
5349	3R_DroMel_CAF1	14,025,755 – 14,025,849	- - - - - - - - -	8721	14,025,755 – 14,025,849	-	5	97	90.76	-1.54	0.78	0.606506
5350	3R_DroMel_CAF1	14,033,367 – 14,033,475	- - - - - - - - -	8722	14,033,367 – 14,033,475	+	5	108	81.30	-2.07	0.72	0.908825
5350	3R_DroMel_CAF1	14,033,367 – 14,033,475	- - - - - - - - -	8723	14,033,367 – 14,033,475	-	5	108	81.30	-2.73	0.64	0.981531
5351	3R_DroMel_CAF1	14,037,871 – 14,038,005	- - - - - - - - -	8724	14,037,871 – 14,037,966	+	6	105	75.91	-2.56	0.58	0.988731
				8725	14,037,871 – 14,037,966	-	6	105	75.91	-2.62	0.54	0.988329
				8726	14,037,898 – 14,038,005	+	6	118	65.23	-1.81	0.43	0.876286
5352	3R_DroMel_CAF1	14,040,375 – 14,040,471	- - - - - - - - -	8727	14,040,375 – 14,040,471	+	5	103	86.74	-1.43	0.80	0.500000
5353	3R_DroMel_CAF1	14,045,805 – 14,045,925	- - - "knownCDS=Parent=FBtr0083610;Name=CG7183-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7183-RA" - - - - -	8728	14,045,805 – 14,045,925	+	6	120	74.33	-1.57	0.57	0.733088
5354	3R_DroMel_CAF1	14,051,848 – 14,051,982	- - - - - - - - -	8729	14,051,848 – 14,051,944	+	5	98	79.05	-1.98	0.41	0.555286
5354	3R_DroMel_CAF1	14,051,848 – 14,051,982	- - - - - - - - -	8730	14,051,866 – 14,051,982	+	5	120	74.87	-1.87	0.36	0.737710
5355	3R_DroMel_CAF1	14,052,021 – 14,052,132	- - - - - - - - -	8731	14,052,021 – 14,052,132	+	5	118	86.17	-2.14	0.68	0.730645
5356	3R_DroMel_CAF1	14,061,491 – 14,061,581	- - - - - - - - -	8732	14,061,491 – 14,061,581	-	6	91	78.81	-2.82	0.56	0.970845
5357	3R_DroMel_CAF1	14,063,754 – 14,063,868	- - - "knownCDS=Parent=FBtr0083564;Name=repo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31240-RA" - - - - -	8733	14,063,754 – 14,063,868	-	6	120	79.85	-1.70	0.67	0.794895
5358	3R_DroMel_CAF1	14,065,678 – 14,065,798	- - - "knownCDS=Parent=FBtr0083607;Name=CG7156-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7156-RB" - - - - -	8734	14,065,678 – 14,065,798	+	6	120	79.39	-1.83	0.56	0.616716
5359	3R_DroMel_CAF1	14,069,411 – 14,069,510	- - - - - - - - -	8735	14,069,411 – 14,069,510	+	3	114	70.92	-2.32	0.53	0.985301
5360	3R_DroMel_CAF1	14,074,322 – 14,074,416	- - - - - - - - -	8736	14,074,322 – 14,074,416	+	4	94	89.62	-1.46	0.91	0.707042
5361	3R_DroMel_CAF1	14,077,442 – 14,077,562	- - - "knownCDS=Parent=FBtr0083605;Name=CG12320-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12320-RA" - - - - -	8737	14,077,442 – 14,077,562	+	6	120	78.06	-1.93	0.59	0.847849
5362	3R_DroMel_CAF1	14,078,850 – 14,078,956	- - - "knownCDS=Parent=FBtr0100274;Name=Rpb4-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33520-RD" - - - - -	8738	14,078,850 – 14,078,956	+	6	115	75.52	-1.58	0.60	0.776026
5362	3R_DroMel_CAF1	14,078,850 – 14,078,956		8739	14,078,850 – 14,078,956	-	6	115	75.52	-1.37	0.68	0.849992
5363	3R_DroMel_CAF1	14,082,576 – 14,082,674	- - - "knownCDS=Parent=FBtr0083570;Name=CG31241-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31241-RA" - - - - -	8740	14,082,576 – 14,082,674	+	6	102	77.79	-1.83	0.53	0.647913
5364	3R_DroMel_CAF1	14,085,700 – 14,085,793	- - - - - - - - -	8741	14,085,700 – 14,085,793	+	6	109	84.29	-2.07	0.85	0.859288
5364	3R_DroMel_CAF1	14,085,700 – 14,085,793	- - - - - - - - -	8742	14,085,700 – 14,085,793	-	6	109	84.29	-2.22	0.78	0.759329
5365	3R_DroMel_CAF1	14,091,257 – 14,091,351	- - - - - - - - -	8743	14,091,257 – 14,091,351	+	6	98	91.26	-2.53	0.82	0.860515
5365	3R_DroMel_CAF1	14,091,257 – 14,091,351	- - - - - - - - -	8744	14,091,257 – 14,091,351	-	6	98	91.26	-2.19	0.83	0.808174
5366	3R_DroMel_CAF1	14,092,295 – 14,092,391	- - - - - - - - -	8745	14,092,295 – 14,092,391	+	5	96	89.06	-2.43	0.65	0.500000
5367	3R_DroMel_CAF1	14,100,439 – 14,100,579	- - - - - - - - -	8746	14,100,439 – 14,100,539	-	4	100	95.83	-1.65	0.86	0.531879
5367	3R_DroMel_CAF1	14,100,439 – 14,100,579	- - - - - - - - -	8747	14,100,468 – 14,100,579	-	4	111	94.29	-2.15	0.80	0.745390
5368	3R_DroMel_CAF1	14,100,677 – 14,100,837	- - - "knownCDS=Parent=FBtr0083573;Name=eIF-1A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8053-RB" - - - - -	8748	14,100,677 – 14,100,797	-	6	120	89.67	-1.78	0.82	0.535861
5368	3R_DroMel_CAF1	14,100,677 – 14,100,837		8749	14,100,717 – 14,100,837	+	6	120	91.50	-1.19	0.93	0.753403
5369	3R_DroMel_CAF1	14,101,168 – 14,101,285	- - - - - - - - -	8750	14,101,168 – 14,101,285	+	5	117	80.41	-2.51	0.56	0.950815
5370	3R_DroMel_CAF1	14,104,829 – 14,104,968	- - - "knownCDS=Parent=FBtr0083600;Name=CG7142-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7142-RA" - - - - -	8751	14,104,829 – 14,104,931	-	6	105	89.19	-1.52	0.91	0.819374
5370	3R_DroMel_CAF1	14,104,829 – 14,104,968		8752	14,104,868 – 14,104,968	-	6	106	87.45	-1.96	0.83	0.688020
5371	3R_DroMel_CAF1	14,114,085 – 14,114,205	- - - "knownCDS=Parent=FBtr0083597;Name=CG7131-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7131-RA" - - - - -	8753	14,114,085 – 14,114,205	+	6	120	77.00	-1.98	0.51	0.762781
5372	3R_DroMel_CAF1	14,116,632 – 14,116,725	- - "RNAmicro=f:14116632_t:14116733_strand:-_p:0.965737" "knownCDS=Parent=FBtr0083595, FBtr0083596;Name=l(3)05822-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7129-RA, FlyBase+Annotation+IDs:CG7129-RB" - - - - -	8754	14,116,632 – 14,116,725	+	6	102	81.78	-2.83	0.83	0.954438
5372	3R_DroMel_CAF1	14,116,632 – 14,116,725		8755	14,116,632 – 14,116,725	-	6	102	81.78	-3.70	0.87	0.977292
5373	3R_DroMel_CAF1	14,116,754 – 14,116,846	- - "RNAmicro=f:14116754_t:14116848_strand:+_p:0.995715" "knownCDS=Parent=FBtr0083595, FBtr0083596;Name=l(3)05822-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7129-RA, FlyBase+Annotation+IDs:CG7129-RB" - - - - -	8756	14,116,754 – 14,116,846	+	6	95	88.82	-4.02	0.89	0.998830
5373	3R_DroMel_CAF1	14,116,754 – 14,116,846		8757	14,116,754 – 14,116,846	-	6	95	88.82	-2.27	0.82	0.752610
5374	3R_DroMel_CAF1	14,116,990 – 14,117,083	- - - "knownCDS=Parent=FBtr0083595, FBtr0083596;Name=l(3)05822-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7129-RA, FlyBase+Annotation+IDs:CG7129-RB" - - - - -	8758	14,116,990 – 14,117,083	-	6	107	78.92	-1.55	0.58	0.500000
5375	3R_DroMel_CAF1	14,118,424 – 14,118,524	- - - - - - - - -	8759	14,118,424 – 14,118,524	-	5	100	92.50	-1.76	0.91	0.990590
5376	3R_DroMel_CAF1	14,118,798 – 14,118,894	- - - - - - - - -	8760	14,118,798 – 14,118,894	-	5	117	73.88	-1.81	0.54	0.794612
5377	3R_DroMel_CAF1	14,120,840 – 14,120,939	- - - - - - - - -	8761	14,120,840 – 14,120,939	-	4	99	95.79	-1.45	0.95	0.584167
5378	3R_DroMel_CAF1	14,122,127 – 14,122,258	- - - - - - - - -	8762	14,122,127 – 14,122,227	+	4	101	83.64	-1.96	0.69	0.807633
5378	3R_DroMel_CAF1	14,122,127 – 14,122,258	- - - - - - - - -	8763	14,122,166 – 14,122,258	+	4	93	76.94	-2.52	0.64	0.995049
5379	3R_DroMel_CAF1	14,122,511 – 14,122,610	- - - - - - - - -	8764	14,122,511 – 14,122,610	+	4	112	81.30	-1.88	0.65	0.732027
5379	3R_DroMel_CAF1	14,122,511 – 14,122,610	- - - - - - - - -	8765	14,122,511 – 14,122,610	-	4	112	81.30	-1.84	0.69	0.774953
5380	3R_DroMel_CAF1	14,129,702 – 14,129,800	- - - "knownCDS=Parent=FBtr0083589, FBtr0083590, FBtr0083591, FBtr0083592;Name=PKD-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7125-RA, FlyBase+Annotation+IDs:CG7125-RB, FlyBase+Annotation+IDs:CG7125-RC, FlyBase+Annotation+IDs:CG7125-RD" - - - - -	8766	14,129,702 – 14,129,800	+	6	106	77.11	-0.96	0.72	0.579815
5381	3R_DroMel_CAF1	14,139,465 – 14,139,555	- - - - - - - - -	8767	14,139,465 – 14,139,555	-	4	90	94.63	-1.62	0.94	0.788264
5382	3R_DroMel_CAF1	14,140,493 – 14,140,613	- - - - - - - - -	8768	14,140,493 – 14,140,583	+	5	90	84.90	-2.14	0.63	0.643735
5382	3R_DroMel_CAF1	14,140,493 – 14,140,613	- - - - - - - - -	8769	14,140,512 – 14,140,613	+	5	101	80.88	-1.73	0.63	0.577145
5383	3R_DroMel_CAF1	14,142,987 – 14,143,102	- - - "knownCDS=Parent=FBtr0083588;Name=CG31235-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31235-RA" - - - - -	8770	14,142,987 – 14,143,102	-	4	115	96.38	-2.24	0.90	0.909096
5384	3R_DroMel_CAF1	14,146,848 – 14,146,950	- - - - - - - - -	8771	14,146,848 – 14,146,950	-	5	111	70.98	-1.77	0.33	0.655625
5385	3R_DroMel_CAF1	14,149,499 – 14,149,590	- - - - - - - - -	8772	14,149,499 – 14,149,590	-	3	91	90.30	-3.24	0.98	0.995953
5386	3R_DroMel_CAF1	14,150,481 – 14,150,574	- - - - - - - - -	8773	14,150,481 – 14,150,574	-	5	100	72.20	-1.63	0.10	0.714192
5387	3R_DroMel_CAF1	14,151,646 – 14,151,748	- - - - - - - - -	8774	14,151,646 – 14,151,748	-	4	109	86.26	-2.07	0.69	0.802492
5388	3R_DroMel_CAF1	14,155,587 – 14,155,680	- - - - - - - - -	8775	14,155,587 – 14,155,680	+	6	100	72.78	-2.35	0.32	0.864013
5388	3R_DroMel_CAF1	14,155,587 – 14,155,680	- - - - - - - - -	8776	14,155,587 – 14,155,680	-	6	100	72.78	-2.11	0.31	0.601876
5389	3R_DroMel_CAF1	14,156,284 – 14,156,387	- - - - - - - - -	8777	14,156,284 – 14,156,387	-	5	116	71.61	-2.17	0.38	0.969342
5390	3R_DroMel_CAF1	14,160,550 – 14,160,640	- - - - - - - - -	8778	14,160,550 – 14,160,640	+	6	90	73.26	-1.52	0.65	0.910103
5391	3R_DroMel_CAF1	14,165,546 – 14,165,655	- - - - - - - - -	8779	14,165,546 – 14,165,655	-	6	113	78.69	-2.26	0.46	0.679027
5392	3R_DroMel_CAF1	14,166,388 – 14,166,501	- - - - - - - - -	8780	14,166,388 – 14,166,501	+	6	120	78.24	-2.18	0.55	0.886335
5392	3R_DroMel_CAF1	14,166,388 – 14,166,501	- - - - - - - - -	8781	14,166,388 – 14,166,501	-	6	120	78.24	-2.35	0.60	0.953686
5393	3R_DroMel_CAF1	14,166,801 – 14,166,891	- - - - - - - - -	8782	14,166,801 – 14,166,891	+	6	106	75.83	-1.75	0.58	0.836023
5394	3R_DroMel_CAF1	14,169,436 – 14,169,526	- - - - - - - - -	8783	14,169,436 – 14,169,526	+	5	90	94.78	-2.22	0.77	0.814740
5394	3R_DroMel_CAF1	14,169,436 – 14,169,526	- - - - - - - - -	8784	14,169,436 – 14,169,526	-	5	90	94.78	-1.68	0.84	0.877989
5395	3R_DroMel_CAF1	14,180,904 – 14,181,143	- - - "knownCDS=Parent=FBtr0083587;Name=CG15803-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15803-RA" - - - - -	8785	14,180,904 – 14,181,023	+	6	119	93.89	-2.03	0.96	0.999018
5395	3R_DroMel_CAF1	14,180,904 – 14,181,143		8786	14,181,023 – 14,181,143	+	6	120	83.83	-2.19	0.73	0.681831
5396	3R_DroMel_CAF1	14,181,705 – 14,181,836	- - - - - - - - -	8787	14,181,705 – 14,181,812	+	5	107	84.74	-3.95	0.84	0.999612
				8788	14,181,705 – 14,181,812	-	5	107	84.74	-2.80	0.84	0.996406
				8789	14,181,739 – 14,181,836	+	5	97	80.36	-1.82	0.61	0.651818
5397	3R_DroMel_CAF1	14,182,851 – 14,182,941	- - - - - - - - -	8790	14,182,851 – 14,182,941	-	6	114	79.84	-1.87	0.58	0.687148
5398	3R_DroMel_CAF1	14,184,967 – 14,185,068	- - - - - - - - -	8791	14,184,967 – 14,185,068	+	4	105	81.86	-2.39	0.54	0.679278
5399	3R_DroMel_CAF1	14,186,058 – 14,186,149	- - - - - - - - -	8792	14,186,058 – 14,186,149	-	5	91	83.15	-1.85	0.70	0.728708
5400	3R_DroMel_CAF1	14,191,074 – 14,191,166	- - - - - - - - -	8793	14,191,074 – 14,191,166	-	6	117	66.48	-1.25	0.63	0.790644
5401	3R_DroMel_CAF1	14,195,690 – 14,195,810	- - - "knownCDS=Parent=FBtr0083584;Name=gl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7672-RA" - - - - -	8794	14,195,690 – 14,195,810	+	6	120	73.08	-1.65	0.48	0.533055
5402	3R_DroMel_CAF1	14,212,163 – 14,212,283	- - - "knownCDS=Parent=FBtr0083624;Name=CG7676-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7676-RA" - - - - -	8795	14,212,163 – 14,212,283	-	5	120	86.92	-2.97	0.63	0.807732
5403	3R_DroMel_CAF1	14,212,588 – 14,212,725	- - - - - - - - -	8796	14,212,588 – 14,212,705	-	5	120	85.74	-2.56	0.61	0.731400
5403	3R_DroMel_CAF1	14,212,588 – 14,212,725	- - - - - - - - -	8797	14,212,625 – 14,212,725	-	5	100	86.89	-2.47	0.66	0.753936
5404	3R_DroMel_CAF1	14,214,322 – 14,214,442	- - - "knownCDS=Parent=FBtr0083658;Name=CG7678-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7678-RA" - - - - -	8798	14,214,322 – 14,214,442	+	6	120	81.17	-1.94	0.56	0.530500
5404	3R_DroMel_CAF1	14,214,322 – 14,214,442		8799	14,214,322 – 14,214,442	-	6	120	81.17	-1.79	0.63	0.662313
5405	3R_DroMel_CAF1	14,219,821 – 14,219,931	- - - - - - - - -	8800	14,219,821 – 14,219,931	+	4	120	85.74	-1.41	0.79	0.528619
5406	3R_DroMel_CAF1	14,223,055 – 14,223,168	- - - "knownCDS=Parent=FBtr0083625;Name=CG31232-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31232-RA" - - - - -	8801	14,223,055 – 14,223,168	+	4	114	76.72	-1.97	0.55	0.683719
5407	3R_DroMel_CAF1	14,224,269 – 14,224,366	- - - - - - - - -	8802	14,224,269 – 14,224,366	+	3	111	80.50	-3.10	0.64	0.991190
5408	3R_DroMel_CAF1	14,225,491 – 14,225,592	- - - - - - - - -	8803	14,225,491 – 14,225,592	+	6	113	68.08	-1.73	0.45	0.796346
5408	3R_DroMel_CAF1	14,225,491 – 14,225,592	- - - - - - - - -	8804	14,225,491 – 14,225,592	-	6	113	68.08	-1.89	0.50	0.939095
5409	3R_DroMel_CAF1	14,227,518 – 14,227,638	- - - "knownCDS=Parent=FBtr0083655;Name=CG12333-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12333-RA" - - - - -	8805	14,227,518 – 14,227,638	-	6	120	81.00	-1.41	0.72	0.647076
5410	3R_DroMel_CAF1	14,227,718 – 14,227,808	- - - "knownCDS=Parent=FBtr0083655;Name=CG12333-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12333-RA" - - - - -	8806	14,227,718 – 14,227,808	-	6	93	83.52	-2.39	0.69	0.688743
5411	3R_DroMel_CAF1	14,228,429 – 14,228,533	- - - - - - - - -	8807	14,228,429 – 14,228,533	-	4	113	75.96	-2.41	0.69	0.996402
5412	3R_DroMel_CAF1	14,248,826 – 14,248,917	- - - "knownCDS=Parent=FBtr0083650;Name=fru-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14307-RK" - - - - -	8808	14,248,826 – 14,248,917	-	6	105	81.53	-1.33	0.88	0.645058
5413	3R_DroMel_CAF1	14,252,801 – 14,252,896	- - - "knownCDS=Parent=FBtr0083652;Name=fru-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14307-RM" - - - - -	8809	14,252,801 – 14,252,896	+	4	101	94.00	-2.11	0.96	0.973171
5413	3R_DroMel_CAF1	14,252,801 – 14,252,896		8810	14,252,801 – 14,252,896	-	4	101	94.00	-1.33	0.92	0.508148
5414	3R_DroMel_CAF1	14,257,608 – 14,257,727	- - - "knownCDS=Parent=FBtr0083647;Name=fru-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14307-RD" - - - - -	8811	14,257,608 – 14,257,727	+	6	119	78.83	-2.31	0.48	0.765828
5415	3R_DroMel_CAF1	14,269,230 – 14,269,328	- - - - - - - - -	8812	14,269,230 – 14,269,328	+	5	109	90.00	-1.86	0.74	0.682479
5416	3R_DroMel_CAF1	14,269,953 – 14,270,054	- - - - - - - - -	8813	14,269,953 – 14,270,054	-	3	108	76.73	-2.15	0.91	0.999099
5417	3R_DroMel_CAF1	14,274,070 – 14,274,201	- - - - - - - - -	8814	14,274,070 – 14,274,181	-	6	115	79.64	-1.68	0.73	0.853991
5417	3R_DroMel_CAF1	14,274,070 – 14,274,201	- - - - - - - - -	8815	14,274,106 – 14,274,201	-	6	119	75.16	-1.43	0.63	0.766506
5418	3R_DroMel_CAF1	14,276,804 – 14,276,941	- - - - - - - - -	8816	14,276,804 – 14,276,915	-	4	112	85.20	-1.50	0.86	0.634809
				8817	14,276,843 – 14,276,941	+	5	106	81.52	-1.98	0.55	0.580936
				8818	14,276,843 – 14,276,941	-	5	106	81.52	-2.99	0.56	0.981537
5419	3R_DroMel_CAF1	14,277,058 – 14,277,150	- - - - - - - - -	8819	14,277,058 – 14,277,150	+	5	103	76.92	-1.62	0.65	0.698075
5420	3R_DroMel_CAF1	14,279,062 – 14,279,153	- - - - - - - - -	8820	14,279,062 – 14,279,153	+	6	99	79.22	-1.95	0.78	0.933087
5420	3R_DroMel_CAF1	14,279,062 – 14,279,153	- - - - - - - - -	8821	14,279,062 – 14,279,153	-	6	99	79.22	-1.36	0.79	0.796512
5421	3R_DroMel_CAF1	14,281,027 – 14,281,118	- - - - - - - - -	8822	14,281,027 – 14,281,118	-	5	93	65.00	-2.43	0.30	0.896906
5422	3R_DroMel_CAF1	14,286,005 – 14,286,101	- - - - - - - - -	8823	14,286,005 – 14,286,101	+	6	96	92.52	-1.56	0.85	0.597247
5422	3R_DroMel_CAF1	14,286,005 – 14,286,101	- - - - - - - - -	8824	14,286,005 – 14,286,101	-	6	96	92.52	-1.24	0.89	0.594986
5423	3R_DroMel_CAF1	14,286,651 – 14,286,759	- - - - - - - - -	8825	14,286,651 – 14,286,759	-	6	114	79.05	-1.90	0.62	0.842246
5424	3R_DroMel_CAF1	14,306,299 – 14,306,440	- - - - - - - - -	8826	14,306,299 – 14,306,419	+	6	120	97.50	-1.22	0.93	0.887181
				8827	14,306,299 – 14,306,419	-	6	120	97.50	-2.02	0.94	0.998264
				8828	14,306,339 – 14,306,440	-	6	108	93.34	-2.76	0.81	0.857459
5425	3R_DroMel_CAF1	14,313,801 – 14,313,891	- - - - - - - - -	8829	14,313,801 – 14,313,891	+	6	95	80.84	-1.24	0.76	0.599594
5425	3R_DroMel_CAF1	14,313,801 – 14,313,891	- - - - - - - - -	8830	14,313,801 – 14,313,891	-	6	95	80.84	-1.52	0.72	0.716514
5426	3R_DroMel_CAF1	14,315,657 – 14,315,765	- - - - - - - - -	8831	14,315,657 – 14,315,765	-	6	119	66.47	-2.05	0.29	0.745856
5427	3R_DroMel_CAF1	14,322,138 – 14,322,249	- - - - - - - - -	8832	14,322,138 – 14,322,249	+	3	113	77.58	-2.74	0.56	0.965518
5427	3R_DroMel_CAF1	14,322,138 – 14,322,249	- - - - - - - - -	8833	14,322,138 – 14,322,249	-	3	113	77.58	-2.12	0.55	0.617169
5428	3R_DroMel_CAF1	14,322,501 – 14,322,608	- - - - - - - - -	8834	14,322,501 – 14,322,608	-	6	118	70.61	-1.64	0.64	0.951440
5429	3R_DroMel_CAF1	14,326,573 – 14,326,705	- - - - - - - - -	8835	14,326,573 – 14,326,681	+	6	115	84.25	-2.03	0.81	0.764383
5429	3R_DroMel_CAF1	14,326,573 – 14,326,705	- - - - - - - - -	8836	14,326,606 – 14,326,705	+	6	117	82.48	-1.65	0.65	0.519068
5430	3R_DroMel_CAF1	14,326,832 – 14,326,922	- - - - - - - - -	8837	14,326,832 – 14,326,922	-	5	105	81.10	-1.95	0.56	0.612144
5431	3R_DroMel_CAF1	14,332,469 – 14,332,563	- - - - - - - - -	8838	14,332,469 – 14,332,563	+	5	101	90.53	-1.33	0.83	0.550806
5432	3R_DroMel_CAF1	14,333,027 – 14,333,124	- - - - - - - - -	8839	14,333,027 – 14,333,124	-	5	97	90.10	-1.61	0.76	0.615035
5433	3R_DroMel_CAF1	14,334,286 – 14,334,382	- - - - - - - - -	8840	14,334,286 – 14,334,382	-	5	103	84.31	-1.56	0.79	0.579804
5434	3R_DroMel_CAF1	14,336,762 – 14,336,861	- - - - - - - - -	8841	14,336,762 – 14,336,861	+	6	102	78.59	-2.20	0.46	0.611053
5435	3R_DroMel_CAF1	14,339,613 – 14,339,706	- - - - - - - - -	8842	14,339,613 – 14,339,706	+	6	114	79.21	-1.33	0.66	0.595738
5435	3R_DroMel_CAF1	14,339,613 – 14,339,706	- - - - - - - - -	8843	14,339,613 – 14,339,706	-	6	114	79.21	-1.33	0.71	0.715351
5436	3R_DroMel_CAF1	14,340,947 – 14,341,065	- - - "knownCDS=Parent=FBtr0083645;Name=fru-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14307-RG" - - - - -	8844	14,340,947 – 14,341,065	-	6	120	76.71	-1.57	0.62	0.787057
5437	3R_DroMel_CAF1	14,348,412 – 14,348,513	- - - - - - - - -	8845	14,348,412 – 14,348,513	-	6	120	75.83	-1.25	0.67	0.741018
5438	3R_DroMel_CAF1	14,349,759 – 14,349,867	- - - - - - - - -	8846	14,349,759 – 14,349,867	-	6	116	78.28	-0.84	0.80	0.531082
5439	3R_DroMel_CAF1	14,351,532 – 14,351,627	- - - - - - - - -	8847	14,351,532 – 14,351,627	+	6	96	77.52	-2.25	0.48	0.839951
5440	3R_DroMel_CAF1	14,353,408 – 14,353,571	- - "RNAmicro=f:14353408_t:14353497_strand:-_p:0.936984" - - - - - -	8848	14,353,408 – 14,353,498	+	4	90	83.83	-2.35	0.79	0.966580
				8849	14,353,408 – 14,353,498	-	4	90	83.83	-1.59	0.74	0.624700
				8850	14,353,432 – 14,353,538	+	3	106	92.72	-4.42	0.97	0.988604
				8851	14,353,432 – 14,353,538	-	3	106	92.72	-3.44	0.90	0.977956
				8852	14,353,468 – 14,353,571	+	4	103	83.41	-3.24	0.70	0.994393
				8853	14,353,468 – 14,353,571	-	4	103	83.41	-2.24	0.67	0.891832
5441	3R_DroMel_CAF1	14,353,736 – 14,353,841	- - - - - - - - -	8854	14,353,736 – 14,353,841	+	5	107	69.86	-2.66	0.50	0.998780
5442	3R_DroMel_CAF1	14,357,430 – 14,357,526	- - - - - - - - -	8855	14,357,430 – 14,357,526	+	4	96	94.10	-2.01	0.95	0.959888
5442	3R_DroMel_CAF1	14,357,430 – 14,357,526	- - - - - - - - -	8856	14,357,430 – 14,357,526	-	4	96	94.10	-1.67	0.84	0.604907
5443	3R_DroMel_CAF1	14,366,489 – 14,366,587	- - - - - - - - -	8857	14,366,489 – 14,366,587	+	6	120	80.21	-1.24	0.73	0.623419
5444	3R_DroMel_CAF1	14,367,148 – 14,367,241	- - - - - - - - -	8858	14,367,148 – 14,367,241	+	5	113	66.60	-2.74	0.41	0.997291
5445	3R_DroMel_CAF1	14,367,527 – 14,367,629	- - - - - - - - -	8859	14,367,527 – 14,367,629	-	6	119	78.48	-2.10	0.72	0.952425
5446	3R_DroMel_CAF1	14,371,301 – 14,371,406	- - - - - - - - -	8860	14,371,301 – 14,371,406	-	5	117	75.99	-1.90	0.57	0.840842
5447	3R_DroMel_CAF1	14,372,504 – 14,372,608	- - - - - - - - -	8861	14,372,504 – 14,372,608	+	6	108	69.66	-2.53	0.46	0.994543
5447	3R_DroMel_CAF1	14,372,504 – 14,372,608	- - - - - - - - -	8862	14,372,504 – 14,372,608	-	6	108	69.66	-2.69	0.51	0.997272
5448	3R_DroMel_CAF1	14,378,596 – 14,378,691	- - - - - - - - -	8863	14,378,596 – 14,378,691	-	5	96	84.87	-1.60	0.91	0.778681
5449	3R_DroMel_CAF1	14,379,734 – 14,379,924	- - - - - - - - -	8864	14,379,734 – 14,379,854	+	6	120	81.92	-1.60	0.72	0.655106
				8865	14,379,734 – 14,379,854	-	6	120	81.92	-1.20	0.85	0.507743
				8866	14,379,774 – 14,379,886	+	6	120	87.85	-3.58	0.82	0.978399
				8867	14,379,774 – 14,379,886	-	6	120	87.85	-1.86	0.95	0.977389
				8868	14,379,814 – 14,379,924	+	6	118	82.41	-2.20	0.68	0.752661
5450	3R_DroMel_CAF1	14,384,346 – 14,384,444	- - - - - - - - -	8869	14,384,346 – 14,384,444	-	6	102	81.47	-1.29	0.75	0.580075
5451	3R_DroMel_CAF1	14,395,481 – 14,395,576	- - - - - - - - -	8870	14,395,481 – 14,395,576	+	3	95	80.57	-2.46	0.55	0.615647
5452	3R_DroMel_CAF1	14,398,879 – 14,398,981	- - - - - - - - -	8871	14,398,879 – 14,398,981	-	6	106	76.39	-1.02	0.69	0.559062
5453	3R_DroMel_CAF1	14,402,658 – 14,402,785	- - - - - - - - -	8872	14,402,658 – 14,402,772	+	5	120	81.00	-1.59	0.65	0.500000
				8873	14,402,658 – 14,402,772	-	5	120	81.00	-1.83	0.65	0.710889
				8874	14,402,692 – 14,402,785	+	4	97	81.25	-2.19	0.85	0.972991
5454	3R_DroMel_CAF1	14,403,868 – 14,403,967	- - - - - - - - -	8875	14,403,868 – 14,403,967	+	3	109	81.01	-2.32	0.75	0.958992
5454	3R_DroMel_CAF1	14,403,868 – 14,403,967	- - - - - - - - -	8876	14,403,868 – 14,403,967	-	3	109	81.01	-2.46	0.57	0.722227
5455	3R_DroMel_CAF1	14,408,368 – 14,408,476	- - - - - - - - -	8877	14,408,368 – 14,408,476	-	4	108	89.25	-2.28	0.72	0.810058
5456	3R_DroMel_CAF1	14,412,396 – 14,412,541	- - - "knownCDS=Parent=FBtr0083638;Name=fray-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7693-RB" - - - - -	8878	14,412,396 – 14,412,501	-	6	108	79.00	-2.04	0.51	0.650355
5456	3R_DroMel_CAF1	14,412,396 – 14,412,541		8879	14,412,436 – 14,412,541	+	6	120	72.77	-1.85	0.39	0.525511
5457	3R_DroMel_CAF1	14,420,983 – 14,421,091	- - - "knownCDS=Parent=FBtr0083639;Name=CG14304-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14304-RA" - - - - -	8880	14,420,983 – 14,421,091	-	6	108	85.93	-2.35	0.75	0.576367
5458	3R_DroMel_CAF1	14,422,005 – 14,422,196	- - - "knownCDS=Parent=FBtr0083639;Name=CG14304-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14304-RA" - - - - -	8881	14,422,005 – 14,422,104	-	6	102	75.19	-2.10	0.57	0.959608
5458	3R_DroMel_CAF1	14,422,005 – 14,422,196		8882	14,422,104 – 14,422,196	-	5	92	91.63	-2.16	0.73	0.695023
5459	3R_DroMel_CAF1	14,424,104 – 14,424,200	- - - "knownCDS=Parent=FBtr0083639;Name=CG14304-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14304-RA" - - - - -	8883	14,424,104 – 14,424,200	-	6	111	79.60	-2.42	0.46	0.687605
5460	3R_DroMel_CAF1	14,432,013 – 14,432,106	- - - - - - - - -	8884	14,432,013 – 14,432,106	+	6	99	83.03	-2.17	0.79	0.832521
5460	3R_DroMel_CAF1	14,432,013 – 14,432,106	- - - - - - - - -	8885	14,432,013 – 14,432,106	-	6	99	83.03	-1.49	0.72	0.516085
5461	3R_DroMel_CAF1	14,444,439 – 14,444,578	- - - - - - - - -	8886	14,444,439 – 14,444,550	-	5	120	81.88	-1.76	0.71	0.710828
				8887	14,444,470 – 14,444,578	+	4	120	71.52	-1.60	0.63	0.835238
				8888	14,444,470 – 14,444,578	-	4	120	71.52	-1.28	0.68	0.593511
5462	3R_DroMel_CAF1	14,444,696 – 14,444,814	- - - - - - - - -	8889	14,444,696 – 14,444,814	-	4	118	89.83	-1.56	0.74	0.549698
5463	3R_DroMel_CAF1	14,444,851 – 14,445,147	- - - - - - - - -	8890	14,444,851 – 14,444,971	-	5	120	90.22	-2.09	0.72	0.695823
				8891	14,444,931 – 14,445,051	-	5	120	93.20	-1.24	0.86	0.571471
				8892	14,445,011 – 14,445,131	-	5	120	93.71	-2.08	0.84	0.982965
				8893	14,445,051 – 14,445,147	-	5	120	89.61	-1.95	0.72	0.672116
5464	3R_DroMel_CAF1	14,445,187 – 14,445,307	- - - - - - - - -	8894	14,445,187 – 14,445,307	+	5	120	96.16	-1.20	0.90	0.564736
5464	3R_DroMel_CAF1	14,445,187 – 14,445,307	- - - - - - - - -	8895	14,445,187 – 14,445,307	-	5	120	96.16	-1.92	0.92	0.995835
5465	3R_DroMel_CAF1	14,445,610 – 14,445,750	- - - - - - - - -	8896	14,445,610 – 14,445,710	-	4	120	86.24	-1.98	0.81	0.887979
5465	3R_DroMel_CAF1	14,445,610 – 14,445,750	- - - - - - - - -	8897	14,445,638 – 14,445,750	-	4	120	86.24	-2.23	0.66	0.780973
5466	3R_DroMel_CAF1	14,445,759 – 14,445,897	- - - - - - - - -	8898	14,445,759 – 14,445,857	-	4	102	89.51	-1.97	0.80	0.858498
5466	3R_DroMel_CAF1	14,445,759 – 14,445,897	- - - - - - - - -	8899	14,445,781 – 14,445,897	-	4	120	87.37	-1.64	0.79	0.704712
5467	3R_DroMel_CAF1	14,446,376 – 14,446,486	- - - - - - - - -	8900	14,446,376 – 14,446,486	+	5	120	86.87	-2.67	0.74	0.968826
5467	3R_DroMel_CAF1	14,446,376 – 14,446,486	- - - - - - - - -	8901	14,446,376 – 14,446,486	-	5	120	86.87	-2.52	0.78	0.979719
5468	3R_DroMel_CAF1	14,447,000 – 14,447,110	- - - - - - - - -	8902	14,447,000 – 14,447,110	-	5	120	86.61	-1.53	0.79	0.586387
5469	3R_DroMel_CAF1	14,448,456 – 14,448,842	- - - - - - - - -	8903	14,448,456 – 14,448,576	-	5	120	86.67	-2.21	0.84	0.978766
				8904	14,448,496 – 14,448,613	+	5	120	92.81	-2.91	0.80	0.993515
				8905	14,448,496 – 14,448,613	-	5	120	92.81	-2.55	0.91	0.999788
				8906	14,448,536 – 14,448,642	+	5	120	88.77	-2.81	0.72	0.946634
				8907	14,448,536 – 14,448,642	-	5	120	88.77	-4.42	0.81	0.999401
				8908	14,448,576 – 14,448,682	-	5	120	83.79	-1.84	0.72	0.724486
				8909	14,448,642 – 14,448,762	-	5	120	92.96	-1.53	0.91	0.959772
				8910	14,448,722 – 14,448,842	-	5	120	94.00	-1.69	0.92	0.989122
5470	3R_DroMel_CAF1	14,449,694 – 14,449,814	- - - - - - - - -	8911	14,449,694 – 14,449,814	+	5	120	93.26	-1.40	0.83	0.677573
5471	3R_DroMel_CAF1	14,450,180 – 14,450,294	- - - - - - - - -	8912	14,450,180 – 14,450,294	+	5	120	85.64	-1.88	0.72	0.719652
5472	3R_DroMel_CAF1	14,450,562 – 14,450,682	- - - - - - - - -	8913	14,450,562 – 14,450,682	+	5	120	97.33	-1.90	0.82	0.823148
5473	3R_DroMel_CAF1	14,450,842 – 14,450,956	- - - - - - - - -	8914	14,450,842 – 14,450,956	+	5	120	84.73	-1.98	0.63	0.575075
5473	3R_DroMel_CAF1	14,450,842 – 14,450,956	- - - - - - - - -	8915	14,450,842 – 14,450,956	-	5	120	84.73	-2.06	0.66	0.716913
5474	3R_DroMel_CAF1	14,451,399 – 14,451,631	- - - - - - - - -	8916	14,451,399 – 14,451,515	+	5	120	91.22	-1.82	0.80	0.879635
				8917	14,451,399 – 14,451,515	-	5	120	91.22	-1.33	0.84	0.612053
				8918	14,451,438 – 14,451,551	+	5	120	90.90	-2.68	0.84	0.998530
				8919	14,451,438 – 14,451,551	-	5	120	90.90	-2.56	0.75	0.944875
				8920	14,451,477 – 14,451,591	+	5	120	92.64	-1.26	0.92	0.800316
				8921	14,451,477 – 14,451,591	-	5	120	92.64	-1.60	0.79	0.698169
				8922	14,451,515 – 14,451,631	+	5	120	92.57	-1.61	0.80	0.728129
5475	3R_DroMel_CAF1	14,452,035 – 14,452,155	- - - - - - - - -	8923	14,452,035 – 14,452,155	+	5	120	93.80	-1.52	0.81	0.664948
5475	3R_DroMel_CAF1	14,452,035 – 14,452,155	- - - - - - - - -	8924	14,452,035 – 14,452,155	-	5	120	93.80	-2.38	0.85	0.996916
5476	3R_DroMel_CAF1	14,452,195 – 14,452,306	- - - - - - - - -	8925	14,452,195 – 14,452,306	-	5	120	88.65	-1.77	0.83	0.898276
5477	3R_DroMel_CAF1	14,453,083 – 14,453,239	- - - - - - - - -	8926	14,453,083 – 14,453,199	+	5	119	87.81	-2.07	0.85	0.972028
				8927	14,453,083 – 14,453,199	-	5	119	87.81	-2.02	0.74	0.815177
				8928	14,453,120 – 14,453,239	-	5	119	86.84	-1.91	0.73	0.736668
5478	3R_DroMel_CAF1	14,453,358 – 14,453,478	- - - - - - - - -	8929	14,453,358 – 14,453,478	+	5	120	97.25	-1.74	0.93	0.983338
5479	3R_DroMel_CAF1	14,453,941 – 14,454,283	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000242;Name=Dmel_Pro_TGG_14000242;TFAMID=DmelPTGG-14454260" - - - "Rfam=BX649307.12/28705-28634_RF00005;tRNA;\|2e-22" - - - "Flybase=FBgn0011944:transfer_RNA:pro:90Ca:cytosolic_tRNA_gene\|4e-36"	8930	14,453,941 – 14,454,055	+	5	120	95.27	-1.68	0.97	0.994723
				8931	14,453,941 – 14,454,055	-	5	120	95.27	-2.42	0.85	0.995854
				8932	14,453,975 – 14,454,095	+	5	120	98.33	-2.05	0.97	0.997540
				8933	14,453,975 – 14,454,095	-	5	120	98.33	-1.78	0.97	0.989802
				8934	14,454,055 – 14,454,168	+	5	120	88.95	-2.38	0.71	0.820808
				8935	14,454,055 – 14,454,168	-	5	120	88.95	-1.65	0.76	0.659930
				8936	14,454,095 – 14,454,203	+	5	120	85.78	-1.52	0.79	0.555382
				8937	14,454,135 – 14,454,243	+	5	120	91.76	-3.24	0.85	0.999730
				8938	14,454,135 – 14,454,243	-	5	120	91.76	-3.02	0.89	0.999901
				8939	14,454,168 – 14,454,283	+	5	120	93.76	-2.23	0.86	0.995279
				8940	14,454,168 – 14,454,283	-	5	120	93.76	-1.88	0.89	0.991612
5480	3R_DroMel_CAF1	14,455,987 – 14,456,107	- - - - - - - - -	8941	14,455,987 – 14,456,107	+	4	120	87.72	-1.76	0.68	0.613170
5481	3R_DroMel_CAF1	14,456,418 – 14,456,538	- - - "knownCDS=Parent=FBtr0083692;Name=CG14301-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14301-RA" - - - - -	8942	14,456,418 – 14,456,538	+	4	120	89.86	-1.55	0.75	0.560788
5482	3R_DroMel_CAF1	14,456,698 – 14,456,817	- - - "knownCDS=Parent=FBtr0083692;Name=CG14301-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14301-RA" - - - - -	8943	14,456,698 – 14,456,817	+	4	120	93.86	-2.47	0.79	0.805551
5483	3R_DroMel_CAF1	14,458,396 – 14,458,512	- - - - - - - - -	8944	14,458,396 – 14,458,512	+	4	120	90.01	-1.63	0.76	0.614685
5484	3R_DroMel_CAF1	14,459,158 – 14,459,310	- - - - - - - - -	8945	14,459,158 – 14,459,278	+	4	120	94.42	-1.72	0.90	0.797535
				8946	14,459,198 – 14,459,310	+	4	120	87.45	-1.54	0.77	0.623405
				8947	14,459,198 – 14,459,310	-	4	120	87.45	-1.82	0.78	0.797405
5485	3R_DroMel_CAF1	14,459,791 – 14,459,987	- - - - - - - - -	8948	14,459,791 – 14,459,907	+	4	120	90.88	-2.11	0.71	0.629099
5485	3R_DroMel_CAF1	14,459,791 – 14,459,987	- - - - - - - - -	8949	14,459,867 – 14,459,987	-	4	120	92.44	-1.40	0.91	0.620336
5486	3R_DroMel_CAF1	14,460,616 – 14,460,724	- - - - - - - - -	8950	14,460,616 – 14,460,724	+	3	117	80.41	-2.87	0.58	0.931840
5486	3R_DroMel_CAF1	14,460,616 – 14,460,724	- - - - - - - - -	8951	14,460,616 – 14,460,724	-	3	117	80.41	-3.59	0.60	0.991678
5487	3R_DroMel_CAF1	14,461,360 – 14,461,457	- - - - - - - - -	8952	14,461,360 – 14,461,457	+	4	104	84.46	-1.86	0.74	0.800862
5488	3R_DroMel_CAF1	14,461,656 – 14,461,770	- - - - - - - - -	8953	14,461,656 – 14,461,770	-	4	120	88.38	-1.80	0.74	0.719880
5489	3R_DroMel_CAF1	14,461,991 – 14,462,111	- - - - - - - - -	8954	14,461,991 – 14,462,111	+	4	120	93.70	-1.97	0.84	0.819252
5490	3R_DroMel_CAF1	14,463,287 – 14,463,633	- - - - - - - - -	8955	14,463,287 – 14,463,407	-	3	120	96.67	-3.12	0.95	0.984501
				8956	14,463,327 – 14,463,447	+	3	120	99.44	-1.57	1.00	0.703161
				8957	14,463,327 – 14,463,447	-	3	120	99.44	-2.11	0.98	0.908867
				8958	14,463,367 – 14,463,487	+	3	120	98.33	-1.70	0.91	0.535502
				8959	14,463,367 – 14,463,487	-	3	120	98.33	-3.21	0.96	0.983821
				8960	14,463,407 – 14,463,527	-	3	120	93.20	-1.82	0.91	0.682799
				8961	14,463,527 – 14,463,633	-	3	116	91.72	-1.82	0.86	0.560455
5491	3R_DroMel_CAF1	14,464,050 – 14,464,168	- - - - - - - - -	8962	14,464,050 – 14,464,168	+	3	120	87.15	-1.93	0.77	0.559331
5492	3R_DroMel_CAF1	14,464,838 – 14,464,956	- - - - - - - - -	8963	14,464,838 – 14,464,956	-	3	118	83.86	-1.72	0.85	0.774678
5493	3R_DroMel_CAF1	14,464,996 – 14,465,153	- - - - - - - - -	8964	14,464,996 – 14,465,113	+	3	120	93.56	-2.39	0.82	0.690081
5493	3R_DroMel_CAF1	14,464,996 – 14,465,153	- - - - - - - - -	8965	14,465,035 – 14,465,153	+	3	120	83.62	-2.14	0.71	0.781780
5494	3R_DroMel_CAF1	14,465,193 – 14,465,351	- - - - - - - - -	8966	14,465,193 – 14,465,311	-	3	120	92.74	-1.36	0.95	0.500000
				8967	14,465,233 – 14,465,351	+	3	120	83.52	-3.73	0.73	0.989808
				8968	14,465,233 – 14,465,351	-	3	120	83.52	-3.61	0.79	0.991300
5495	3R_DroMel_CAF1	14,465,391 – 14,465,547	- - - - - - - - -	8969	14,465,391 – 14,465,510	-	3	120	94.97	-2.30	0.84	0.685262
5495	3R_DroMel_CAF1	14,465,391 – 14,465,547	- - - - - - - - -	8970	14,465,430 – 14,465,547	-	3	120	85.11	-1.80	0.78	0.603403
5496	3R_DroMel_CAF1	14,466,818 – 14,466,938	- - - - - - - - -	8971	14,466,818 – 14,466,938	+	3	120	95.54	-2.23	0.90	0.839408
5497	3R_DroMel_CAF1	14,467,120 – 14,467,337	- - - - - - - - -	8972	14,467,120 – 14,467,218	-	3	120	72.19	-1.22	0.70	0.711227
				8973	14,467,218 – 14,467,337	+	3	120	83.57	-1.95	0.64	0.500000
				8974	14,467,218 – 14,467,337	-	3	120	83.57	-1.89	0.66	0.535979
5498	3R_DroMel_CAF1	14,467,968 – 14,468,109	- - - - - - - - -	8975	14,467,968 – 14,468,072	+	3	120	82.23	-0.61	0.91	0.593221
				8976	14,467,968 – 14,468,072	-	3	120	82.23	-2.47	0.89	0.989459
				8977	14,467,992 – 14,468,109	-	3	120	89.83	-2.55	0.90	0.952342
5499	3R_DroMel_CAF1	14,468,543 – 14,468,659	- - - - - - - - -	8978	14,468,543 – 14,468,659	+	3	120	85.51	-2.22	0.71	0.706668
5500	3R_DroMel_CAF1	14,469,474 – 14,469,673	- - - - - - - - -	8979	14,469,474 – 14,469,594	+	3	120	96.11	-1.96	0.92	0.745406
				8980	14,469,474 – 14,469,594	-	3	120	96.11	-2.03	0.88	0.643895
				8981	14,469,554 – 14,469,673	-	3	120	88.33	-1.92	0.79	0.551235
5501	3R_DroMel_CAF1	14,471,250 – 14,471,427	- - - "knownCDS=Parent=FBtr0083659;Name=CG14303-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14303-RA" - - - - -	8982	14,471,250 – 14,471,361	+	6	114	77.44	-1.91	0.58	0.862363
5501	3R_DroMel_CAF1	14,471,250 – 14,471,427		8983	14,471,324 – 14,471,427	-	6	106	75.06	-1.86	0.53	0.828104
5502	3R_DroMel_CAF1	14,474,085 – 14,474,196	- - - "knownCDS=Parent=FBtr0083659;Name=CG14303-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14303-RA" - - - - -	8984	14,474,085 – 14,474,196	+	6	111	76.22	-2.75	0.30	0.823047
5503	3R_DroMel_CAF1	14,478,123 – 14,478,234	- - - "knownCDS=Parent=FBtr0083691;Name=CG31224-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31224-RA" - - - - -	8985	14,478,123 – 14,478,234	+	6	111	78.56	-1.40	0.61	0.531628
5504	3R_DroMel_CAF1	14,478,590 – 14,478,683	- - - "knownCDS=Parent=FBtr0083691;Name=CG31224-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31224-RA" - - - - -	8986	14,478,590 – 14,478,683	+	6	93	81.38	-1.59	0.65	0.578277
5505	3R_DroMel_CAF1	14,479,760 – 14,479,861	- - - "knownCDS=Parent=FBtr0083691;Name=CG31224-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31224-RA" - - - - -	8987	14,479,760 – 14,479,861	+	6	113	82.67	-2.05	0.60	0.500000
5506	3R_DroMel_CAF1	14,482,332 – 14,482,423	- - - "knownCDS=Parent=FBtr0083691;Name=CG31224-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31224-RA" - - - - -	8988	14,482,332 – 14,482,423	+	5	91	96.59	-1.75	0.95	0.992548
5507	3R_DroMel_CAF1	14,482,496 – 14,482,586	- - - "knownCDS=Parent=FBtr0083691;Name=CG31224-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31224-RA" - - - - -	8989	14,482,496 – 14,482,586	-	6	97	83.86	-1.60	0.80	0.596002
5508	3R_DroMel_CAF1	14,482,626 – 14,482,737	- - - "knownCDS=Parent=FBtr0083691;Name=CG31224-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31224-RA" - - - - -	8990	14,482,626 – 14,482,737	-	6	114	77.72	-1.85	0.67	0.925541
5509	3R_DroMel_CAF1	14,484,960 – 14,485,054	- - - - - - - - -	8991	14,484,960 – 14,485,054	-	6	112	78.83	-1.36	0.66	0.643910
5510	3R_DroMel_CAF1	14,486,487 – 14,486,598	- - - "knownCDS=Parent=FBtr0083660;Name=CstF-64-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7697-RA" - - - - -	8992	14,486,487 – 14,486,598	-	6	111	79.70	-1.60	0.73	0.825345
5511	3R_DroMel_CAF1	14,486,638 – 14,486,754	- - - "knownCDS=Parent=FBtr0083660;Name=CstF-64-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7697-RA" - - - - -	8993	14,486,638 – 14,486,754	-	6	120	77.54	-2.12	0.51	0.833178
5512	3R_DroMel_CAF1	14,502,917 – 14,503,034	- - - "knownCDS=Parent=FBtr0083688;Name=CG7705-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7705-RA" - - - - -	8994	14,502,917 – 14,503,034	+	6	117	80.98	-2.01	0.58	0.648115
5513	3R_DroMel_CAF1	14,508,493 – 14,508,612	- - - "knownCDS=Parent=FBtr0083668;Name=CG7708-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7708-RA" - - - - -	8995	14,508,493 – 14,508,612	+	6	120	78.07	-1.50	0.59	0.569021
5514	3R_DroMel_CAF1	14,512,887 – 14,512,977	- - - - - - - - -	8996	14,512,887 – 14,512,977	+	6	100	75.68	-3.16	0.20	0.818566
5514	3R_DroMel_CAF1	14,512,887 – 14,512,977	- - - - - - - - -	8997	14,512,887 – 14,512,977	-	6	100	75.68	-2.48	0.27	0.551752
5515	3R_DroMel_CAF1	14,515,084 – 14,515,232	- - - "knownCDS=Parent=FBtr0083687;Name=CG7709-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7709-RA" - - - - -	8998	14,515,084 – 14,515,200	+	6	116	69.20	-2.06	0.34	0.827407
				8999	14,515,084 – 14,515,200	-	6	116	69.20	-2.56	0.33	0.982606
				9000	14,515,124 – 14,515,232	+	5	116	67.75	-1.76	0.39	0.600282
				9001	14,515,124 – 14,515,232	-	5	116	67.75	-2.40	0.44	0.992209
5516	3R_DroMel_CAF1	14,519,034 – 14,519,135	- - - "knownCDS=Parent=FBtr0100288;Name=CG14300-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14300-RA" - - - - -	9002	14,519,034 – 14,519,135	-	6	105	81.17	-1.69	0.63	0.612278
5517	3R_DroMel_CAF1	14,521,048 – 14,521,153	- - - - - - - - -	9003	14,521,048 – 14,521,153	+	6	110	84.45	-2.28	0.80	0.809525
5517	3R_DroMel_CAF1	14,521,048 – 14,521,153	- - - - - - - - -	9004	14,521,048 – 14,521,153	-	6	110	84.45	-1.90	0.72	0.507482
5518	3R_DroMel_CAF1	14,522,565 – 14,522,703	- - - - - - - - -	9005	14,522,565 – 14,522,666	-	3	115	80.31	-2.03	0.74	0.915539
5518	3R_DroMel_CAF1	14,522,565 – 14,522,703	- - - - - - - - -	9006	14,522,594 – 14,522,703	+	6	117	79.02	-2.48	0.45	0.772198
5519	3R_DroMel_CAF1	14,530,586 – 14,530,697	- - - - - - - - -	9007	14,530,586 – 14,530,697	+	5	112	75.14	-1.69	0.25	0.625116
5520	3R_DroMel_CAF1	14,531,734 – 14,531,837	- - - "knownCDS=Parent=FBtr0089367;Name=Cha-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12345-RA" - - - - -	9008	14,531,734 – 14,531,837	-	6	120	81.69	-1.57	0.70	0.644266
5521	3R_DroMel_CAF1	14,532,031 – 14,532,133	- - - - - - - - -	9009	14,532,031 – 14,532,133	+	3	102	73.15	-2.18	0.56	0.966476
5521	3R_DroMel_CAF1	14,532,031 – 14,532,133	- - - - - - - - -	9010	14,532,031 – 14,532,133	-	3	102	73.15	-1.89	0.67	0.991295
5522	3R_DroMel_CAF1	14,562,492 – 14,562,597	- - - "knownCDS=Parent=FBtr0083684;Name=Mekk1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7717-RB" - - - - -	9011	14,562,492 – 14,562,597	-	6	120	78.94	-1.55	0.59	0.539998
5523	3R_DroMel_CAF1	14,565,463 – 14,565,557	- - - - - - - - -	9012	14,565,463 – 14,565,557	+	4	101	84.25	-1.65	0.76	0.684909
5524	3R_DroMel_CAF1	14,571,398 – 14,571,518	- - - "knownCDS=Parent=FBtr0083682;Name=CG7718-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7718-RA" - - - - -	9013	14,571,398 – 14,571,518	+	6	120	76.81	-2.29	0.52	0.940548
5525	3R_DroMel_CAF1	14,573,213 – 14,573,333	- - - "knownCDS=Parent=FBtr0083674;Name=gwl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7719-RA" - - - - -	9014	14,573,213 – 14,573,333	+	6	120	84.11	-1.78	0.72	0.511823
5526	3R_DroMel_CAF1	14,573,843 – 14,573,938	- - - "knownCDS=Parent=FBtr0083674;Name=gwl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7719-RA" - - - - -	9015	14,573,843 – 14,573,938	-	6	101	79.48	-1.56	0.62	0.627259
5527	3R_DroMel_CAF1	14,574,129 – 14,574,227	- - - "knownCDS=Parent=FBtr0083674;Name=gwl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7719-RA" - - - - -	9016	14,574,129 – 14,574,227	+	6	98	80.36	-1.16	0.71	0.529340
5528	3R_DroMel_CAF1	14,582,325 – 14,582,445	- - - "knownCDS=Parent=FBtr0100423;Name=CG14299-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14299-RB" - - - - -	9017	14,582,325 – 14,582,445	+	6	120	78.50	-1.96	0.51	0.606593
5529	3R_DroMel_CAF1	14,584,929 – 14,585,028	- - - - - - - - -	9018	14,584,929 – 14,585,028	-	5	112	85.81	-1.90	0.78	0.836704
5530	3R_DroMel_CAF1	14,586,579 – 14,586,677	- - - - - - - - -	9019	14,586,579 – 14,586,677	+	6	98	79.51	-1.65	0.62	0.689247
5531	3R_DroMel_CAF1	14,589,653 – 14,589,793	- - - - - - - - -	9020	14,589,653 – 14,589,758	-	5	114	76.94	-1.85	0.51	0.639154
				9021	14,589,687 – 14,589,793	+	4	115	82.29	-2.26	0.69	0.937273
				9022	14,589,687 – 14,589,793	-	4	115	82.29	-3.92	0.66	0.998006
5532	3R_DroMel_CAF1	14,590,289 – 14,590,381	- - - - - - - - -	9023	14,590,289 – 14,590,381	+	6	92	86.08	-1.98	0.77	0.531732
5533	3R_DroMel_CAF1	14,592,421 – 14,592,518	- - - - - - - - -	9024	14,592,421 – 14,592,518	+	5	114	71.80	-1.53	0.58	0.608246
5534	3R_DroMel_CAF1	14,593,823 – 14,593,948	- - - - - - - - -	9025	14,593,823 – 14,593,919	+	6	107	80.46	-2.40	0.70	0.925776
5534	3R_DroMel_CAF1	14,593,823 – 14,593,948	- - - - - - - - -	9026	14,593,850 – 14,593,948	+	6	100	83.68	-2.42	0.85	0.925090
5535	3R_DroMel_CAF1	14,611,657 – 14,611,758	- - - - - - - - -	9027	14,611,657 – 14,611,758	-	4	101	87.29	-2.10	0.62	0.546546
5536	3R_DroMel_CAF1	14,621,059 – 14,621,184	- - - - - - - - -	9028	14,621,059 – 14,621,154	-	5	95	94.00	-2.26	0.86	0.995684
5536	3R_DroMel_CAF1	14,621,059 – 14,621,184	- - - - - - - - -	9029	14,621,083 – 14,621,184	-	5	111	83.14	-2.00	0.77	0.878912
5537	3R_DroMel_CAF1	14,622,689 – 14,622,779	- - - - - - - - -	9030	14,622,689 – 14,622,779	+	6	90	79.38	-1.32	0.77	0.761334
5537	3R_DroMel_CAF1	14,622,689 – 14,622,779	- - - - - - - - -	9031	14,622,689 – 14,622,779	-	6	90	79.38	-1.54	0.78	0.850943
5538	3R_DroMel_CAF1	14,626,343 – 14,626,439	- - - - - - - - -	9032	14,626,343 – 14,626,439	+	5	102	91.07	-2.05	0.75	0.822305
5539	3R_DroMel_CAF1	14,626,728 – 14,626,823	- - - - - - - - -	9033	14,626,728 – 14,626,823	+	5	97	94.29	-1.67	0.81	0.795415
5539	3R_DroMel_CAF1	14,626,728 – 14,626,823	- - - - - - - - -	9034	14,626,728 – 14,626,823	-	5	97	94.29	-2.33	0.72	0.515815
5540	3R_DroMel_CAF1	14,629,919 – 14,630,015	- - - - - - - - -	9035	14,629,919 – 14,630,015	-	6	97	75.04	-2.09	0.37	0.550830
5541	3R_DroMel_CAF1	14,631,748 – 14,631,868	- - - - - - - - -	9036	14,631,748 – 14,631,868	-	6	120	91.50	-2.23	0.83	0.806907
5542	3R_DroMel_CAF1	14,637,107 – 14,637,207	- - - - - - - - -	9037	14,637,107 – 14,637,207	-	6	109	81.38	-2.30	0.58	0.729531
5543	3R_DroMel_CAF1	14,643,741 – 14,643,839	- - - - - - - - -	9038	14,643,741 – 14,643,839	+	6	103	67.42	-2.68	0.11	0.534880
5543	3R_DroMel_CAF1	14,643,741 – 14,643,839	- - - - - - - - -	9039	14,643,741 – 14,643,839	-	6	103	67.42	-3.40	0.15	0.954210
5544	3R_DroMel_CAF1	14,645,128 – 14,645,241	- - - - - - - - -	9040	14,645,128 – 14,645,241	-	6	120	76.04	-1.22	0.65	0.637236
5545	3R_DroMel_CAF1	14,650,274 – 14,650,387	- - - - - - - - -	9041	14,650,274 – 14,650,387	+	4	113	78.67	-2.20	0.64	0.946524
5545	3R_DroMel_CAF1	14,650,274 – 14,650,387	- - - - - - - - -	9042	14,650,274 – 14,650,387	-	4	113	78.67	-3.08	0.64	0.998897
5546	3R_DroMel_CAF1	14,650,688 – 14,650,791	- - - - - - - - -	9043	14,650,688 – 14,650,791	+	6	111	80.40	-1.76	0.70	0.814016
5547	3R_DroMel_CAF1	14,655,436 – 14,655,537	- - - - - - - - -	9044	14,655,436 – 14,655,537	+	6	116	83.16	-2.04	0.66	0.579956
5548	3R_DroMel_CAF1	14,656,234 – 14,656,331	- - - - - - - - -	9045	14,656,234 – 14,656,331	-	6	98	79.45	-1.63	0.77	0.867964
5549	3R_DroMel_CAF1	14,660,566 – 14,660,660	- - - - - - - - -	9046	14,660,566 – 14,660,660	+	6	95	86.04	-2.36	0.75	0.567639
5550	3R_DroMel_CAF1	14,667,913 – 14,668,030	- - - - - - - - -	9047	14,667,913 – 14,668,004	+	6	96	78.89	-2.54	0.60	0.957301
				9048	14,667,913 – 14,668,004	-	6	96	78.89	-1.76	0.68	0.875428
				9049	14,667,929 – 14,668,030	+	6	112	78.73	-2.07	0.70	0.939859
				9050	14,667,929 – 14,668,030	-	6	112	78.73	-1.80	0.75	0.920806
5551	3R_DroMel_CAF1	14,672,607 – 14,672,699	- - - - - - - - -	9051	14,672,607 – 14,672,699	-	6	107	74.62	-2.18	0.37	0.721724
5552	3R_DroMel_CAF1	14,673,179 – 14,673,276	- - - - - - - - -	9052	14,673,179 – 14,673,276	+	5	107	82.38	-2.50	0.54	0.848080
5553	3R_DroMel_CAF1	14,679,777 – 14,679,868	- - - - - - - - -	9053	14,679,777 – 14,679,868	+	5	97	81.08	-2.07	0.51	0.617305
5554	3R_DroMel_CAF1	14,690,921 – 14,691,014	- - - - - - - - -	9054	14,690,921 – 14,691,014	-	6	101	80.03	-3.24	0.52	0.963269
5555	3R_DroMel_CAF1	14,691,667 – 14,691,766	- - - - - - - - -	9055	14,691,667 – 14,691,766	-	6	120	79.31	-1.26	0.65	0.500000
5556	3R_DroMel_CAF1	14,694,905 – 14,695,042	- - - - - - - - -	9056	14,694,905 – 14,695,002	+	6	120	82.48	-5.88	0.60	0.980475
				9057	14,694,905 – 14,695,002	-	6	120	82.48	-4.07	0.63	0.951692
				9058	14,694,945 – 14,695,042	+	6	120	81.91	-3.75	0.46	0.904466
				9059	14,694,945 – 14,695,042	-	6	120	81.91	-2.68	0.56	0.768558
5557	3R_DroMel_CAF1	14,697,390 – 14,697,497	- - - - - - - - -	9060	14,697,390 – 14,697,497	-	5	114	93.44	-1.36	0.93	0.918794
5558	3R_DroMel_CAF1	14,697,606 – 14,697,723	- - - - - - - - -	9061	14,697,606 – 14,697,723	-	3	120	88.33	-2.20	0.85	0.815301
5559	3R_DroMel_CAF1	14,698,771 – 14,698,870	- - - - - - - - -	9062	14,698,771 – 14,698,870	-	4	100	83.08	-2.51	0.79	0.983062
5560	3R_DroMel_CAF1	14,703,612 – 14,703,717	- - - - - - - - -	9063	14,703,612 – 14,703,717	+	6	115	75.07	-2.57	0.60	0.992332
5560	3R_DroMel_CAF1	14,703,612 – 14,703,717	- - - - - - - - -	9064	14,703,612 – 14,703,717	-	6	115	75.07	-2.62	0.62	0.993390
5561	3R_DroMel_CAF1	14,705,377 – 14,705,470	- - - - - - - - -	9065	14,705,377 – 14,705,470	-	6	104	77.62	-2.07	0.52	0.818475
5562	3R_DroMel_CAF1	14,706,836 – 14,706,943	- - - - - - - - -	9066	14,706,836 – 14,706,943	+	5	113	78.87	-1.85	0.57	0.650453
5563	3R_DroMel_CAF1	14,708,164 – 14,708,255	- - - - - - - - -	9067	14,708,164 – 14,708,255	+	6	111	77.17	-1.72	0.52	0.536337
5564	3R_DroMel_CAF1	14,715,089 – 14,715,227	- - - - - - - - -	9068	14,715,089 – 14,715,202	+	5	113	94.42	-3.79	0.92	0.999967
				9069	14,715,089 – 14,715,202	-	5	113	94.42	-2.93	0.96	0.999983
				9070	14,715,123 – 14,715,227	+	6	108	76.76	-1.80	0.52	0.654514
				9071	14,715,123 – 14,715,227	-	6	108	76.76	-1.41	0.62	0.649736
5565	3R_DroMel_CAF1	14,717,328 – 14,717,446	- - - - - - - - -	9072	14,717,328 – 14,717,446	-	6	120	83.69	-2.12	0.77	0.750898
5566	3R_DroMel_CAF1	14,722,629 – 14,722,722	- - - - - - - - -	9073	14,722,629 – 14,722,722	-	6	115	69.90	-1.93	0.30	0.534209
5567	3R_DroMel_CAF1	14,725,182 – 14,725,288	- - - "knownCDS=Parent=FBtr0083697;Name=Rh2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16740-RA" - - - - -	9074	14,725,182 – 14,725,288	-	6	106	81.57	-1.27	0.70	0.511290
5568	3R_DroMel_CAF1	14,726,523 – 14,726,618	- - - - - - - - -	9075	14,726,523 – 14,726,618	+	6	98	87.68	-2.29	0.86	0.935018
5569	3R_DroMel_CAF1	14,729,229 – 14,729,328	- - - - - - - - -	9076	14,729,229 – 14,729,328	+	6	113	80.75	-2.06	0.63	0.801599
5569	3R_DroMel_CAF1	14,729,229 – 14,729,328	- - - - - - - - -	9077	14,729,229 – 14,729,328	-	6	113	80.75	-2.03	0.54	0.532065
5570	3R_DroMel_CAF1	14,729,627 – 14,729,721	- - - - - - - - -	9078	14,729,627 – 14,729,721	+	6	100	75.05	-1.68	0.54	0.707746
5570	3R_DroMel_CAF1	14,729,627 – 14,729,721	- - - - - - - - -	9079	14,729,627 – 14,729,721	-	6	100	75.05	-1.93	0.62	0.956255
5571	3R_DroMel_CAF1	14,733,290 – 14,733,490	- - - "knownCDS=Parent=FBtr0083699;Name=endoA-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14296-RB" - - - - -	9080	14,733,290 – 14,733,410	+	6	120	95.50	-1.61	0.94	0.985807
5571	3R_DroMel_CAF1	14,733,290 – 14,733,490		9081	14,733,370 – 14,733,490	+	6	120	93.94	-1.12	0.94	0.841252
5572	3R_DroMel_CAF1	14,733,770 – 14,733,884	- - - "knownCDS=Parent=FBtr0083699;Name=endoA-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14296-RB" - - - - -	9082	14,733,770 – 14,733,884	+	6	120	92.41	-0.82	0.96	0.514653
5573	3R_DroMel_CAF1	14,738,505 – 14,738,597	- - - - - - - - -	9083	14,738,505 – 14,738,597	+	6	96	69.22	-2.05	0.35	0.848445
5574	3R_DroMel_CAF1	14,739,417 – 14,739,547	- - - - - - - - -	9084	14,739,417 – 14,739,516	-	5	101	79.84	-1.63	0.67	0.626388
5574	3R_DroMel_CAF1	14,739,417 – 14,739,547	- - - - - - - - -	9085	14,739,451 – 14,739,547	-	6	104	80.53	-2.10	0.65	0.849199
5575	3R_DroMel_CAF1	14,739,604 – 14,739,699	- - - - - - - - -	9086	14,739,604 – 14,739,699	+	6	102	86.30	-2.48	0.87	0.957471
5576	3R_DroMel_CAF1	14,741,672 – 14,741,777	- - - - - - - - -	9087	14,741,672 – 14,741,777	+	6	107	69.16	-2.69	0.60	0.996607
5576	3R_DroMel_CAF1	14,741,672 – 14,741,777	- - - - - - - - -	9088	14,741,672 – 14,741,777	-	6	107	69.16	-2.23	0.64	0.991838
5577	3R_DroMel_CAF1	14,744,115 – 14,744,205	- - - - - - - - -	9089	14,744,115 – 14,744,205	+	6	95	86.26	-1.80	0.81	0.581669
5578	3R_DroMel_CAF1	14,745,386 – 14,745,479	- - - - - - - - -	9090	14,745,386 – 14,745,479	+	6	97	85.97	-2.64	0.73	0.581869
5579	3R_DroMel_CAF1	14,746,997 – 14,747,132	- - - - - - - - -	9091	14,746,997 – 14,747,106	-	6	120	84.00	-1.58	0.84	0.635226
5579	3R_DroMel_CAF1	14,746,997 – 14,747,132	- - - - - - - - -	9092	14,747,037 – 14,747,132	-	6	97	76.81	-1.23	0.68	0.689790
5580	3R_DroMel_CAF1	14,753,797 – 14,753,908	- - - - - - - - -	9093	14,753,797 – 14,753,908	+	6	114	83.57	-1.45	0.82	0.552271
5580	3R_DroMel_CAF1	14,753,797 – 14,753,908	- - - - - - - - -	9094	14,753,797 – 14,753,908	-	6	114	83.57	-1.64	0.72	0.530131
5581	3R_DroMel_CAF1	14,754,867 – 14,754,983	- - - - - - - - -	9095	14,754,867 – 14,754,983	+	5	116	88.76	-2.60	0.67	0.722820
5581	3R_DroMel_CAF1	14,754,867 – 14,754,983	- - - - - - - - -	9096	14,754,867 – 14,754,983	-	5	116	88.76	-2.14	0.76	0.895863
5582	3R_DroMel_CAF1	14,756,412 – 14,756,560	- - - - - - - - -	9097	14,756,412 – 14,756,503	-	6	111	81.90	-1.84	0.68	0.691985
				9098	14,756,437 – 14,756,537	-	5	105	93.27	-1.14	0.89	0.525529
				9099	14,756,469 – 14,756,560	+	5	92	95.59	-1.84	0.88	0.981314
				9100	14,756,469 – 14,756,560	-	5	92	95.59	-1.61	0.87	0.915249
5583	3R_DroMel_CAF1	14,761,236 – 14,761,348	- - - - - - - - -	9101	14,761,236 – 14,761,348	+	5	112	75.66	-0.98	0.76	0.554017
5583	3R_DroMel_CAF1	14,761,236 – 14,761,348	- - - - - - - - -	9102	14,761,236 – 14,761,348	-	5	112	75.66	-1.81	0.66	0.905577
5584	3R_DroMel_CAF1	14,762,463 – 14,762,555	- - - - - - - - -	9103	14,762,463 – 14,762,555	+	5	92	91.74	-2.72	0.82	0.996255
5584	3R_DroMel_CAF1	14,762,463 – 14,762,555	- - - - - - - - -	9104	14,762,463 – 14,762,555	-	5	92	91.74	-3.31	0.73	0.956534
5585	3R_DroMel_CAF1	14,762,592 – 14,762,700	- - - - - - - - -	9105	14,762,592 – 14,762,700	+	5	108	85.56	-2.18	0.74	0.890392
5585	3R_DroMel_CAF1	14,762,592 – 14,762,700	- - - - - - - - -	9106	14,762,592 – 14,762,700	-	5	108	85.56	-1.71	0.67	0.500000
5586	3R_DroMel_CAF1	14,763,295 – 14,763,409	- - - - - - - - -	9107	14,763,295 – 14,763,409	-	5	114	92.54	-1.31	0.85	0.643137
5587	3R_DroMel_CAF1	14,768,509 – 14,768,613	- - - - - - - - -	9108	14,768,509 – 14,768,613	-	6	110	80.96	-2.33	0.64	0.858134
5588	3R_DroMel_CAF1	14,769,619 – 14,769,723	- - - - - - - - -	9109	14,769,619 – 14,769,723	-	5	106	89.50	-1.88	0.75	0.743199
5589	3R_DroMel_CAF1	14,771,599 – 14,771,752	- - - - - - - - -	9110	14,771,599 – 14,771,712	-	6	113	80.75	-1.50	0.64	0.575116
5589	3R_DroMel_CAF1	14,771,599 – 14,771,752	- - - - - - - - -	9111	14,771,632 – 14,771,752	-	6	120	77.60	-1.17	0.67	0.581265
5590	3R_DroMel_CAF1	14,772,640 – 14,772,741	- - - - - - - - -	9112	14,772,640 – 14,772,741	+	6	109	81.40	-1.85	0.62	0.628025
5591	3R_DroMel_CAF1	14,774,694 – 14,774,807	- - - - - - - - -	9113	14,774,694 – 14,774,807	+	6	120	82.07	-1.97	0.60	0.551528
5592	3R_DroMel_CAF1	14,775,429 – 14,775,602	- - - "knownCDS=Parent=FBtr0083705;Name=CG31222-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31222-RA" - - - - -	9114	14,775,429 – 14,775,538	+	5	109	85.24	-2.32	0.65	0.776164
				9115	14,775,469 – 14,775,576	+	5	107	88.16	-2.05	0.76	0.861361
				9116	14,775,505 – 14,775,602	+	6	109	83.10	-2.53	0.66	0.724324
				9117	14,775,505 – 14,775,602	-	6	109	83.10	-1.62	0.69	0.512488
5593	3R_DroMel_CAF1	14,776,655 – 14,776,774	- - - - - - - - -	9118	14,776,655 – 14,776,774	-	4	120	75.66	-1.71	0.67	0.810676
5594	3R_DroMel_CAF1	14,778,822 – 14,778,935	- - - - - - - - -	9119	14,778,822 – 14,778,935	-	5	120	92.49	-1.92	0.77	0.787567
5595	3R_DroMel_CAF1	14,779,234 – 14,779,347	- - - - - - - - -	9120	14,779,234 – 14,779,347	-	6	120	77.86	-1.89	0.49	0.535418
5596	3R_DroMel_CAF1	14,779,740 – 14,779,838	- - - - - - - - -	9121	14,779,740 – 14,779,838	-	5	105	85.44	-3.05	0.48	0.521350
5597	3R_DroMel_CAF1	14,780,929 – 14,781,049	- - - - - - - - -	9122	14,780,929 – 14,781,049	-	6	120	87.39	-3.04	0.73	0.582585
5598	3R_DroMel_CAF1	14,782,101 – 14,782,200	- - - - - - - - -	9123	14,782,101 – 14,782,200	+	5	99	87.37	-1.58	0.72	0.511839
5599	3R_DroMel_CAF1	14,783,620 – 14,783,719	- - - - - - - - -	9124	14,783,620 – 14,783,719	-	5	115	76.98	-3.99	0.60	0.999859
5600	3R_DroMel_CAF1	14,784,169 – 14,784,365	- - - "knownCDS=texon3787;Parent=CG_NCBI_GNO_32409684, CG_BATZ_CON_47010154" - - - - -	9125	14,784,169 – 14,784,289	+	6	120	96.17	-1.42	0.98	0.993171
5600	3R_DroMel_CAF1	14,784,169 – 14,784,365		9126	14,784,249 – 14,784,365	+	6	120	79.91	-1.61	0.60	0.573027
5601	3R_DroMel_CAF1	14,786,350 – 14,786,454	- - - - - - - - -	9127	14,786,350 – 14,786,454	+	6	120	77.49	-1.91	0.66	0.936146
5601	3R_DroMel_CAF1	14,786,350 – 14,786,454	- - - - - - - - -	9128	14,786,350 – 14,786,454	-	6	120	77.49	-1.15	0.74	0.741108
5602	3R_DroMel_CAF1	14,786,668 – 14,786,788	- - - - - - - - -	9129	14,786,668 – 14,786,788	-	5	120	80.00	-2.23	0.45	0.769676
5603	3R_DroMel_CAF1	14,787,558 – 14,787,675	- - - - - - - - -	9130	14,787,558 – 14,787,675	-	6	120	83.95	-2.76	0.59	0.524300
5604	3R_DroMel_CAF1	14,789,101 – 14,789,200	- - - - - - - - -	9131	14,789,101 – 14,789,200	+	5	120	66.98	-2.06	0.37	0.892678
5605	3R_DroMel_CAF1	14,789,865 – 14,789,957	- - - - - - - - -	9132	14,789,865 – 14,789,957	-	5	92	88.01	-2.11	0.80	0.945003
5606	3R_DroMel_CAF1	14,790,947 – 14,791,045	- - - - - - - - -	9133	14,790,947 – 14,791,045	-	5	120	65.64	-2.82	0.28	0.977246
5607	3R_DroMel_CAF1	14,791,629 – 14,791,802	- - - - - - - - -	9134	14,791,629 – 14,791,726	+	3	101	85.95	-2.04	0.77	0.678147
				9135	14,791,666 – 14,791,764	+	3	102	80.79	-3.81	0.47	0.665971
				9136	14,791,695 – 14,791,802	-	5	120	69.56	-2.28	0.38	0.982492
5608	3R_DroMel_CAF1	14,792,620 – 14,792,714	- - - - - - - - -	9137	14,792,620 – 14,792,714	+	4	118	71.50	-2.51	0.46	0.967301
5609	3R_DroMel_CAF1	14,795,878 – 14,795,998	- - - "knownCDS=Parent=FBtr0083706;Name=CG31149-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31149-RA" - - - - -	9138	14,795,878 – 14,795,998	+	6	120	96.00	-1.60	1.01	0.999281
5610	3R_DroMel_CAF1	14,796,078 – 14,796,179	- - - - - - - - -	9139	14,796,078 – 14,796,179	+	6	103	83.65	-3.79	0.84	0.978432
5610	3R_DroMel_CAF1	14,796,078 – 14,796,179	- - - - - - - - -	9140	14,796,078 – 14,796,179	-	6	103	83.65	-2.52	0.69	0.714884
5611	3R_DroMel_CAF1	14,796,622 – 14,796,714	- - "RNAmicro=f:14796622_t:14796728_strand:+_p:0.987951" - - - - - -	9141	14,796,622 – 14,796,714	+	5	107	68.21	-5.80	0.67	0.987212
5611	3R_DroMel_CAF1	14,796,622 – 14,796,714		9142	14,796,622 – 14,796,714	-	5	107	68.21	-4.08	0.51	0.999841
5612	3R_DroMel_CAF1	14,797,075 – 14,797,171	- - - - - - - - -	9143	14,797,075 – 14,797,171	+	6	101	82.39	-1.81	0.67	0.613305
5613	3R_DroMel_CAF1	14,798,687 – 14,798,802	- - - "knownCDS=Parent=FBtr0083706;Name=CG31149-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31149-RA" - - - - -	9144	14,798,687 – 14,798,802	+	6	120	80.48	-1.51	0.67	0.647712
5614	3R_DroMel_CAF1	14,808,644 – 14,808,743	- - - - - - - - -	9145	14,808,644 – 14,808,743	-	4	117	75.94	-1.53	0.69	0.625818
5615	3R_DroMel_CAF1	14,808,783 – 14,808,880	- - - - - - - - -	9146	14,808,783 – 14,808,880	+	5	97	90.20	-1.74	0.83	0.905733
5616	3R_DroMel_CAF1	14,810,597 – 14,810,717	- - - "knownCDS=Parent=FBtr0089767;Name=gukh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31043-RB" - - - - -	9147	14,810,597 – 14,810,717	+	6	120	94.61	-1.32	0.90	0.791337
5617	3R_DroMel_CAF1	14,811,533 – 14,811,630	- - - - - - - - -	9148	14,811,533 – 14,811,630	+	3	97	82.98	-1.97	0.73	0.748352
5618	3R_DroMel_CAF1	14,811,775 – 14,811,980	- - - - - - - - -	9149	14,811,775 – 14,811,872	+	5	100	93.10	-3.27	0.73	0.918797
				9150	14,811,775 – 14,811,872	-	5	100	93.10	-2.25	0.74	0.741600
				9151	14,811,803 – 14,811,912	+	4	112	87.87	-2.09	0.71	0.801487
				9152	14,811,872 – 14,811,980	-	3	114	87.72	-2.73	0.64	0.591916
5619	3R_DroMel_CAF1	14,814,056 – 14,814,157	- - - - - - - - -	9153	14,814,056 – 14,814,157	+	5	101	94.55	-1.47	0.81	0.550724
5620	3R_DroMel_CAF1	14,814,768 – 14,814,940	- - - - - - - - -	9154	14,814,768 – 14,814,866	-	4	106	83.76	-1.73	0.62	0.525238
				9155	14,814,796 – 14,814,904	+	4	116	87.65	-1.74	0.88	0.846266
				9156	14,814,796 – 14,814,904	-	4	116	87.65	-2.21	0.78	0.914602
				9157	14,814,830 – 14,814,940	-	5	114	87.61	-1.57	0.83	0.718433
5621	3R_DroMel_CAF1	14,815,014 – 14,815,117	- - - - - - - - -	9158	14,815,014 – 14,815,117	+	5	116	85.08	-2.96	0.64	0.938508
5621	3R_DroMel_CAF1	14,815,014 – 14,815,117	- - - - - - - - -	9159	14,815,014 – 14,815,117	-	5	116	85.08	-3.88	0.61	0.981669
5622	3R_DroMel_CAF1	14,817,683 – 14,817,860	- - - - - - - - -	9160	14,817,683 – 14,817,788	+	5	105	94.00	-1.58	0.87	0.929131
				9161	14,817,715 – 14,817,822	+	5	113	89.40	-3.08	0.91	0.999918
				9162	14,817,715 – 14,817,822	-	5	113	89.40	-4.65	0.91	0.999935
				9163	14,817,752 – 14,817,860	+	5	116	82.82	-2.12	0.62	0.764309
5623	3R_DroMel_CAF1	14,818,244 – 14,818,345	- - - - - - - - -	9164	14,818,244 – 14,818,345	-	5	111	89.90	-1.86	0.91	0.988016
5624	3R_DroMel_CAF1	14,818,465 – 14,818,584	- - - - - - - - -	9165	14,818,465 – 14,818,584	-	5	119	91.28	-2.01	0.97	0.999110
5625	3R_DroMel_CAF1	14,819,440 – 14,819,550	- - - - - - - - -	9166	14,819,440 – 14,819,550	+	5	120	88.16	-1.75	0.74	0.649516
5626	3R_DroMel_CAF1	14,821,920 – 14,822,040	- - - - - - - - -	9167	14,821,920 – 14,822,040	+	3	120	98.33	-1.76	0.98	0.790710
5627	3R_DroMel_CAF1	14,822,198 – 14,822,318	- - - - - - - - -	9168	14,822,198 – 14,822,318	+	3	120	96.39	-1.74	0.96	0.735707
5628	3R_DroMel_CAF1	14,823,299 – 14,823,415	- - - - - - - - -	9169	14,823,299 – 14,823,415	+	3	120	95.56	-2.31	0.89	0.824149
5628	3R_DroMel_CAF1	14,823,299 – 14,823,415	- - - - - - - - -	9170	14,823,299 – 14,823,415	-	3	120	95.56	-2.00	0.85	0.551097
5629	3R_DroMel_CAF1	14,824,037 – 14,824,157	- - - - - - - - -	9171	14,824,037 – 14,824,157	-	3	120	98.89	-1.63	1.00	0.751774
5630	3R_DroMel_CAF1	14,824,650 – 14,825,007	- - - - - - - - -	9172	14,824,650 – 14,824,770	+	3	120	98.89	-1.74	0.94	0.657323
				9173	14,824,690 – 14,824,810	-	3	120	95.28	-2.69	0.96	0.979265
				9174	14,824,810 – 14,824,927	+	3	120	96.92	-2.06	1.00	0.937679
				9175	14,824,810 – 14,824,927	-	3	120	96.92	-1.77	0.99	0.834312
				9176	14,824,887 – 14,825,007	+	3	120	98.33	-1.84	0.96	0.762616
				9177	14,824,887 – 14,825,007	-	3	120	98.33	-1.48	0.96	0.539679
5631	3R_DroMel_CAF1	14,825,701 – 14,825,821	- - - - - - - - -	9178	14,825,701 – 14,825,821	+	3	120	99.44	-1.53	1.00	0.684917
5632	3R_DroMel_CAF1	14,826,292 – 14,826,452	- - - - - - - - -	9179	14,826,292 – 14,826,412	+	3	120	87.64	-1.85	0.88	0.778410
				9180	14,826,292 – 14,826,412	-	3	120	87.64	-1.78	0.81	0.534151
				9181	14,826,332 – 14,826,452	+	3	120	67.50	-2.24	0.81	0.999992
				9182	14,826,332 – 14,826,452	-	3	120	67.50	-2.64	0.72	0.999999
5633	3R_DroMel_CAF1	14,827,687 – 14,827,887	- - "RNAmicro=f:14827767_t:14827886_strand:+_p:0.918414" - - - - - -	9183	14,827,687 – 14,827,807	+	3	120	97.20	-1.45	0.97	0.542369
				9184	14,827,687 – 14,827,807	-	3	120	97.20	-2.24	0.91	0.840722
				9185	14,827,727 – 14,827,847	-	3	120	97.22	-2.10	0.84	0.546800
				9186	14,827,767 – 14,827,887	+	3	120	96.11	-4.65	0.90	0.938718
				9187	14,827,767 – 14,827,887	-	3	120	96.11	-3.38	0.90	0.963843
5634	3R_DroMel_CAF1	14,828,125 – 14,828,244	- - - - - - - - -	9188	14,828,125 – 14,828,244	+	3	120	88.14	-2.33	0.74	0.667131
5634	3R_DroMel_CAF1	14,828,125 – 14,828,244	- - - - - - - - -	9189	14,828,125 – 14,828,244	-	3	120	88.14	-2.87	0.81	0.919702
5635	3R_DroMel_CAF1	14,828,444 – 14,828,601	- - - - - - - - -	9190	14,828,444 – 14,828,561	-	3	120	91.45	-3.62	0.71	0.772130
5635	3R_DroMel_CAF1	14,828,444 – 14,828,601	- - - - - - - - -	9191	14,828,481 – 14,828,601	-	3	120	94.35	-2.66	0.79	0.670006
5636	3R_DroMel_CAF1	14,828,801 – 14,828,920	- - - - - - - - -	9192	14,828,801 – 14,828,920	-	3	120	98.33	-1.70	0.93	0.603022
5637	3R_DroMel_CAF1	14,829,239 – 14,829,382	- - - - - - - - -	9193	14,829,239 – 14,829,342	+	3	120	83.52	-2.65	0.82	0.969263
5637	3R_DroMel_CAF1	14,829,239 – 14,829,382	- - - - - - - - -	9194	14,829,264 – 14,829,382	+	3	120	89.80	-1.81	0.84	0.551332
5638	3R_DroMel_CAF1	14,829,783 – 14,829,901	- - - - - - - - -	9195	14,829,783 – 14,829,901	-	3	120	91.88	-2.01	0.93	0.866773
5639	3R_DroMel_CAF1	14,830,060 – 14,830,216	- - - - - - - - -	9196	14,830,060 – 14,830,176	-	3	120	93.33	-1.91	0.97	0.900936
5639	3R_DroMel_CAF1	14,830,060 – 14,830,216	- - - - - - - - -	9197	14,830,100 – 14,830,216	-	3	120	92.78	-2.40	0.99	0.984617
5640	3R_DroMel_CAF1	14,830,295 – 14,830,415	- - - - - - - - -	9198	14,830,295 – 14,830,415	+	3	120	97.78	-1.83	0.93	0.701165
5641	3R_DroMel_CAF1	14,830,455 – 14,830,575	- - - - - - - - -	9199	14,830,455 – 14,830,575	-	3	120	78.98	-1.90	0.72	0.907481
5642	3R_DroMel_CAF1	14,830,889 – 14,831,003	- - - - - - - - -	9200	14,830,889 – 14,831,003	-	3	120	93.22	-2.42	0.82	0.727832
5643	3R_DroMel_CAF1	14,831,195 – 14,831,315	- - - - - - - - -	9201	14,831,195 – 14,831,315	+	3	120	95.56	-1.92	0.91	0.692151
5643	3R_DroMel_CAF1	14,831,195 – 14,831,315	- - - - - - - - -	9202	14,831,195 – 14,831,315	-	3	120	95.56	-2.33	0.94	0.934880
5644	3R_DroMel_CAF1	14,831,475 – 14,831,823	- - - - - - - - -	9203	14,831,475 – 14,831,583	+	3	120	92.22	-1.80	0.88	0.592403
				9204	14,831,503 – 14,831,623	+	3	120	97.78	-2.03	0.98	0.897789
				9205	14,831,543 – 14,831,663	+	3	120	98.33	-2.18	0.98	0.931556
				9206	14,831,543 – 14,831,663	-	3	120	98.33	-1.58	0.97	0.634442
				9207	14,831,583 – 14,831,703	+	3	120	98.89	-2.65	1.00	0.980837
				9208	14,831,623 – 14,831,743	-	3	120	98.89	-1.30	1.00	0.500000
				9209	14,831,703 – 14,831,823	-	3	120	94.44	-1.97	0.91	0.763143
5645	3R_DroMel_CAF1	14,832,379 – 14,832,499	- - - - - - - - -	9210	14,832,379 – 14,832,499	+	3	120	98.89	-1.89	1.02	0.898808
5646	3R_DroMel_CAF1	14,832,539 – 14,832,809	- - - - - - - - -	9211	14,832,539 – 14,832,649	+	3	120	92.22	-2.75	0.73	0.610723
				9212	14,832,539 – 14,832,649	-	3	120	92.22	-3.06	0.79	0.840367
				9213	14,832,579 – 14,832,689	+	3	120	93.33	-3.96	0.85	0.942972
				9214	14,832,579 – 14,832,689	-	3	120	93.33	-3.28	0.87	0.959602
				9215	14,832,619 – 14,832,729	-	3	120	92.78	-1.90	0.99	0.929790
				9216	14,832,649 – 14,832,769	-	3	120	97.78	-1.76	1.01	0.854074
				9217	14,832,689 – 14,832,809	-	3	120	97.78	-1.55	1.01	0.732864
5647	3R_DroMel_CAF1	14,832,995 – 14,833,155	- - - - - - - - -	9218	14,832,995 – 14,833,115	+	3	120	96.11	-1.74	0.94	0.666537
				9219	14,832,995 – 14,833,115	-	3	120	96.11	-2.25	0.94	0.915320
				9220	14,833,035 – 14,833,155	+	3	120	95.56	-1.85	0.91	0.655437
5648	3R_DroMel_CAF1	14,833,352 – 14,833,472	- - - - - - - - -	9221	14,833,352 – 14,833,472	-	3	120	98.89	-1.47	0.97	0.539344
5649	3R_DroMel_CAF1	14,833,512 – 14,833,790	- - - - - - - - -	9222	14,833,512 – 14,833,630	+	3	120	93.85	-1.84	1.00	0.921885
				9223	14,833,552 – 14,833,670	+	3	120	93.24	-2.25	0.99	0.973833
				9224	14,833,670 – 14,833,790	-	3	120	94.93	-1.84	0.89	0.581334
5650	3R_DroMel_CAF1	14,835,067 – 14,835,347	- - - - - - - - -	9225	14,835,067 – 14,835,187	-	3	120	98.33	-1.49	1.01	0.664228
				9226	14,835,187 – 14,835,307	+	3	120	97.78	-1.86	1.02	0.901075
				9227	14,835,227 – 14,835,347	+	3	120	97.22	-1.42	1.01	0.640488
5651	3R_DroMel_CAF1	14,835,658 – 14,835,778	- - - - - - - - -	9228	14,835,658 – 14,835,778	-	3	120	98.33	-1.56	0.95	0.562927
5652	3R_DroMel_CAF1	14,835,818 – 14,836,018	- - - - - - - - -	9229	14,835,818 – 14,835,938	+	3	120	87.93	-2.73	0.82	0.914769
				9230	14,835,818 – 14,835,938	-	3	120	87.93	-2.66	0.88	0.954169
				9231	14,835,858 – 14,835,978	+	3	120	86.21	-3.50	0.74	0.956502
				9232	14,835,858 – 14,835,978	-	3	120	86.21	-3.86	0.76	0.970558
				9233	14,835,898 – 14,836,018	-	3	120	87.36	-2.22	0.89	0.921975
5653	3R_DroMel_CAF1	14,836,177 – 14,836,607	- - - - - - - - -	9234	14,836,177 – 14,836,296	+	3	120	98.89	-2.46	0.93	0.908321
				9235	14,836,177 – 14,836,296	-	3	120	98.89	-1.93	0.96	0.826411
				9236	14,836,217 – 14,836,336	-	3	120	99.44	-1.65	0.95	0.628995
				9237	14,836,256 – 14,836,376	-	3	120	98.32	-1.51	0.99	0.649760
				9238	14,836,336 – 14,836,456	-	3	120	92.96	-1.65	0.91	0.582211
				9239	14,836,416 – 14,836,527	-	3	120	90.83	-2.27	0.83	0.750437
				9240	14,836,496 – 14,836,607	-	3	120	90.53	-2.87	0.78	0.833433
5654	3R_DroMel_CAF1	14,838,401 – 14,838,516	- - - - - - - - -	9241	14,838,401 – 14,838,516	+	5	120	77.02	-2.13	0.37	0.881537
5655	3R_DroMel_CAF1	14,839,564 – 14,839,668	- - - - - - - - -	9242	14,839,564 – 14,839,668	-	6	108	85.24	-2.17	0.83	0.821492
5656	3R_DroMel_CAF1	14,841,579 – 14,841,679	- - - "knownCDS=Parent=FBtr0089768;Name=gukh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31043-RA" - - - - -	9243	14,841,579 – 14,841,679	+	6	120	77.35	-2.14	0.49	0.810476
5657	3R_DroMel_CAF1	14,845,240 – 14,845,341	- - - - - - - - -	9244	14,845,240 – 14,845,341	+	4	110	81.80	-1.81	0.64	0.643541
5658	3R_DroMel_CAF1	14,849,969 – 14,850,249	- - - "knownCDS=Parent=FBtr0083710;Name=CG14286-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14286-RA" - - - - -	9245	14,849,969 – 14,850,089	-	5	120	93.08	-1.23	0.88	0.639841
				9246	14,850,009 – 14,850,129	+	5	120	93.67	-1.40	0.83	0.647014
				9247	14,850,009 – 14,850,129	-	5	120	93.67	-2.55	0.92	0.999868
				9248	14,850,089 – 14,850,209	+	5	120	94.17	-1.24	0.86	0.551985
				9249	14,850,129 – 14,850,249	-	5	120	95.00	-1.32	0.86	0.617917
5659	3R_DroMel_CAF1	14,856,832 – 14,856,935	- - - "knownCDS=Parent=FBtr0083717;Name=Prp18-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6011-RA" - - - - -	9250	14,856,832 – 14,856,935	-	6	107	79.99	-2.15	0.66	0.893920
5660	3R_DroMel_CAF1	14,862,307 – 14,862,407	- - - - - - - - -	9251	14,862,307 – 14,862,407	+	5	102	82.77	-1.42	0.95	0.627328
5661	3R_DroMel_CAF1	14,873,002 – 14,873,188	- - - "knownCDS=Parent=FBtr0083716;Name=cdi-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6027-RA" - - - - -	9252	14,873,002 – 14,873,110	+	6	108	78.27	-1.73	0.61	0.775310
				9253	14,873,036 – 14,873,150	+	6	114	78.48	-2.67	0.70	0.977140
				9254	14,873,070 – 14,873,188	+	6	118	80.05	-1.86	0.74	0.882429
5662	3R_DroMel_CAF1	14,873,328 – 14,873,475	- - - - - - - - -	9255	14,873,328 – 14,873,435	-	5	120	86.44	-1.82	0.71	0.643931
				9256	14,873,355 – 14,873,475	+	5	120	95.25	-1.62	0.85	0.886406
				9257	14,873,355 – 14,873,475	-	5	120	95.25	-2.31	0.78	0.867637
5663	3R_DroMel_CAF1	14,879,100 – 14,879,216	- - - - - - - - -	9258	14,879,100 – 14,879,216	+	5	116	92.64	-1.40	0.83	0.679753
5664	3R_DroMel_CAF1	14,880,936 – 14,881,040	- - - - - - - - -	9259	14,880,936 – 14,881,040	+	5	104	80.33	-1.43	0.75	0.549924
5665	3R_DroMel_CAF1	14,884,611 – 14,884,705	- - - - - - - - -	9260	14,884,611 – 14,884,705	-	6	94	87.33	-2.99	0.78	0.846896
5666	3R_DroMel_CAF1	14,886,400 – 14,886,494	- - - - - - - - -	9261	14,886,400 – 14,886,494	+	6	106	79.56	-1.47	0.62	0.566524
5667	3R_DroMel_CAF1	14,890,785 – 14,890,917	- - - - - - - - -	9262	14,890,785 – 14,890,884	+	3	99	97.98	-3.01	0.97	0.983944
				9263	14,890,824 – 14,890,917	+	3	93	97.85	-3.15	0.94	0.979210
				9264	14,890,824 – 14,890,917	-	3	93	97.85	-2.09	0.96	0.893421
5668	3R_DroMel_CAF1	14,891,264 – 14,891,356	- - - - - - - - -	9265	14,891,264 – 14,891,356	+	5	101	86.26	-2.22	0.64	0.634254
5669	3R_DroMel_CAF1	14,891,778 – 14,891,876	- - - - - - - - -	9266	14,891,778 – 14,891,876	+	4	100	73.40	-2.33	0.51	0.947832
5670	3R_DroMel_CAF1	14,892,417 – 14,892,549	- - - - - - - - -	9267	14,892,417 – 14,892,516	+	5	99	95.16	-2.64	0.84	0.995649
				9268	14,892,447 – 14,892,549	+	5	105	87.84	-1.69	0.73	0.588323
				9269	14,892,447 – 14,892,549	-	5	105	87.84	-2.37	0.67	0.690321
5671	3R_DroMel_CAF1	14,893,087 – 14,893,180	- - - - - - - - -	9270	14,893,087 – 14,893,180	-	5	116	74.41	-1.73	0.54	0.656431
5672	3R_DroMel_CAF1	14,893,461 – 14,893,551	- - - - - - - - -	9271	14,893,461 – 14,893,551	-	5	96	86.70	-1.75	0.70	0.558931
5673	3R_DroMel_CAF1	14,895,376 – 14,895,480	- - - - - - - - -	9272	14,895,376 – 14,895,480	+	5	116	82.69	-2.26	0.50	0.576616
5673	3R_DroMel_CAF1	14,895,376 – 14,895,480	- - - - - - - - -	9273	14,895,376 – 14,895,480	-	5	116	82.69	-2.65	0.59	0.923285
5674	3R_DroMel_CAF1	14,895,522 – 14,895,632	- - - - - - - - -	9274	14,895,522 – 14,895,632	+	6	113	77.58	-1.59	0.64	0.806605
5675	3R_DroMel_CAF1	14,896,977 – 14,897,096	- - - - - - - - -	9275	14,896,977 – 14,897,070	+	6	112	83.83	-2.04	0.70	0.587090
5675	3R_DroMel_CAF1	14,896,977 – 14,897,096	- - - - - - - - -	9276	14,897,001 – 14,897,096	+	6	112	80.00	-2.65	0.76	0.956612
5676	3R_DroMel_CAF1	14,899,312 – 14,899,411	- - - - - - - - -	9277	14,899,312 – 14,899,411	-	6	108	80.26	-2.24	0.75	0.928549
5677	3R_DroMel_CAF1	14,900,036 – 14,900,133	- - - - - - - - -	9278	14,900,036 – 14,900,133	-	5	115	73.89	-0.52	0.84	0.885208
5678	3R_DroMel_CAF1	14,900,454 – 14,900,749	- - - - - - - - -	9279	14,900,454 – 14,900,551	+	6	107	80.07	-1.27	0.82	0.700469
				9280	14,900,551 – 14,900,651	-	4	103	87.91	-1.64	0.66	0.500000
				9281	14,900,651 – 14,900,749	-	6	117	83.35	-2.06	0.66	0.579561
5679	3R_DroMel_CAF1	14,902,989 – 14,903,128	- - - - - - - - -	9282	14,902,989 – 14,903,102	+	5	113	81.07	-3.21	0.52	0.990334
				9283	14,903,026 – 14,903,128	+	5	102	88.66	-2.40	0.71	0.836338
				9284	14,903,026 – 14,903,128	-	5	102	88.66	-1.77	0.91	0.967163
5680	3R_DroMel_CAF1	14,903,706 – 14,903,801	- - - - - - - - -	9285	14,903,706 – 14,903,801	+	3	95	89.82	-1.73	0.88	0.605581
5680	3R_DroMel_CAF1	14,903,706 – 14,903,801	- - - - - - - - -	9286	14,903,706 – 14,903,801	-	3	95	89.82	-2.42	0.90	0.935557
5681	3R_DroMel_CAF1	14,904,686 – 14,904,787	- - - - - - - - -	9287	14,904,686 – 14,904,787	+	5	110	81.67	-3.75	0.45	0.992579
5681	3R_DroMel_CAF1	14,904,686 – 14,904,787	- - - - - - - - -	9288	14,904,686 – 14,904,787	-	5	110	81.67	-2.52	0.53	0.888224
5682	3R_DroMel_CAF1	14,906,662 – 14,906,781	- - - - - - - - -	9289	14,906,662 – 14,906,781	+	6	119	86.02	-1.40	0.90	0.638306
5683	3R_DroMel_CAF1	14,907,610 – 14,907,714	- - - - - - - - -	9290	14,907,610 – 14,907,714	+	5	115	80.74	-2.01	0.60	0.763006
5683	3R_DroMel_CAF1	14,907,610 – 14,907,714	- - - - - - - - -	9291	14,907,610 – 14,907,714	-	5	115	80.74	-2.28	0.54	0.848683
5684	3R_DroMel_CAF1	14,909,753 – 14,909,845	- - - - - - - - -	9292	14,909,753 – 14,909,845	+	5	92	82.42	-1.87	0.71	0.768713
5684	3R_DroMel_CAF1	14,909,753 – 14,909,845	- - - - - - - - -	9293	14,909,753 – 14,909,845	-	5	92	82.42	-2.14	0.68	0.871846
5685	3R_DroMel_CAF1	14,911,242 – 14,911,336	- - - - - - - - -	9294	14,911,242 – 14,911,336	-	5	106	80.75	-2.60	0.64	0.977412
5686	3R_DroMel_CAF1	14,912,049 – 14,912,150	- - - - - - - - -	9295	14,912,049 – 14,912,150	+	5	101	81.19	-2.66	0.53	0.944118
5687	3R_DroMel_CAF1	14,915,595 – 14,915,687	- - - - - - - - -	9296	14,915,595 – 14,915,687	+	6	99	89.40	-2.60	0.82	0.865323
5687	3R_DroMel_CAF1	14,915,595 – 14,915,687	- - - - - - - - -	9297	14,915,595 – 14,915,687	-	6	99	89.40	-3.12	0.77	0.796938
5688	3R_DroMel_CAF1	14,916,093 – 14,916,208	- - - - - - - - -	9298	14,916,093 – 14,916,208	-	5	115	94.04	-1.75	0.82	0.877983
5689	3R_DroMel_CAF1	14,917,904 – 14,918,015	- - - - - - - - -	9299	14,917,904 – 14,918,015	-	6	115	82.89	-1.88	0.64	0.520131
5690	3R_DroMel_CAF1	14,923,614 – 14,923,704	- - - - - - - - -	9300	14,923,614 – 14,923,704	-	3	98	68.88	-2.17	0.75	0.999969
5691	3R_DroMel_CAF1	14,923,850 – 14,923,968	- - - - - - - - -	9301	14,923,850 – 14,923,968	-	4	120	71.24	-2.22	0.45	0.832959
5692	3R_DroMel_CAF1	14,924,896 – 14,925,006	- - - - - - - - -	9302	14,924,896 – 14,925,006	-	4	113	87.09	-1.84	0.63	0.500000
5693	3R_DroMel_CAF1	14,925,446 – 14,925,550	- - - - - - - - -	9303	14,925,446 – 14,925,550	+	5	110	90.84	-3.40	0.75	0.984523
5693	3R_DroMel_CAF1	14,925,446 – 14,925,550	- - - - - - - - -	9304	14,925,446 – 14,925,550	-	5	110	90.84	-3.50	0.75	0.987692
5694	3R_DroMel_CAF1	14,926,524 – 14,926,628	- - - - - - - - -	9305	14,926,524 – 14,926,628	-	5	104	83.91	-1.55	0.77	0.557773
5695	3R_DroMel_CAF1	14,926,755 – 14,926,976	- - - - - - - - -	9306	14,926,755 – 14,926,872	+	5	120	91.58	-2.66	0.89	0.999703
				9307	14,926,792 – 14,926,912	+	5	120	97.33	-2.03	0.92	0.995858
				9308	14,926,832 – 14,926,936	+	5	120	87.63	-2.05	0.79	0.917724
				9309	14,926,872 – 14,926,976	-	4	120	87.54	-1.64	0.80	0.709462
5696	3R_DroMel_CAF1	14,927,047 – 14,927,395	- - - - - - - - -	9310	14,927,047 – 14,927,166	+	5	120	91.52	-1.15	0.91	0.563822
				9311	14,927,126 – 14,927,246	+	5	120	88.59	-1.82	0.80	0.866754
				9312	14,927,166 – 14,927,281	+	4	120	84.34	-2.02	0.74	0.871205
				9313	14,927,206 – 14,927,321	+	4	120	84.79	-2.72	0.84	0.991170
				9314	14,927,206 – 14,927,321	-	4	120	84.79	-2.89	0.92	0.997405
				9315	14,927,246 – 14,927,361	+	4	120	80.68	-2.20	0.73	0.957505
				9316	14,927,246 – 14,927,361	-	4	120	80.68	-3.25	0.74	0.999136
				9317	14,927,281 – 14,927,395	+	5	120	88.63	-2.16	0.85	0.986297
				9318	14,927,281 – 14,927,395	-	5	120	88.63	-1.68	0.73	0.570828
5697	3R_DroMel_CAF1	14,927,435 – 14,927,610	- - - - - - - - -	9319	14,927,435 – 14,927,538	+	5	120	77.35	-1.89	0.49	0.653042
				9320	14,927,475 – 14,927,575	+	5	120	76.89	-1.67	0.16	0.683777
				9321	14,927,510 – 14,927,610	+	5	120	76.45	-1.52	0.07	0.709269
5698	3R_DroMel_CAF1	14,928,131 – 14,928,251	- - - - - - - - -	9322	14,928,131 – 14,928,251	+	5	120	98.83	-1.60	0.93	0.912220
5699	3R_DroMel_CAF1	14,928,291 – 14,928,489	- - - - - - - - -	9323	14,928,291 – 14,928,411	-	5	120	92.82	-2.17	0.90	0.998470
5699	3R_DroMel_CAF1	14,928,291 – 14,928,489	- - - - - - - - -	9324	14,928,371 – 14,928,489	-	5	120	89.23	-2.86	0.76	0.985033
5700	3R_DroMel_CAF1	14,929,018 – 14,929,135	- - - - - - - - -	9325	14,929,018 – 14,929,135	+	5	120	92.81	-1.69	0.75	0.535515
5701	3R_DroMel_CAF1	14,929,278 – 14,929,398	- - - - - - - - -	9326	14,929,278 – 14,929,398	+	5	120	91.73	-1.75	0.79	0.796148
5702	3R_DroMel_CAF1	14,929,430 – 14,929,587	- - - - - - - - -	9327	14,929,430 – 14,929,547	-	5	120	90.73	-1.99	0.85	0.982271
				9328	14,929,467 – 14,929,587	+	5	120	94.83	-1.78	0.85	0.952911
				9329	14,929,467 – 14,929,587	-	5	120	94.83	-2.06	0.89	0.995861
5703	3R_DroMel_CAF1	14,930,188 – 14,930,342	- - - - - - - - -	9330	14,930,188 – 14,930,302	+	5	117	96.36	-2.01	0.85	0.968293
				9331	14,930,188 – 14,930,302	-	5	117	96.36	-2.18	0.81	0.934801
				9332	14,930,225 – 14,930,342	+	5	120	96.12	-2.41	0.87	0.996704
				9333	14,930,225 – 14,930,342	-	5	120	96.12	-2.74	0.90	0.999614
5704	3R_DroMel_CAF1	14,930,382 – 14,930,499	- - - - - - - - -	9334	14,930,382 – 14,930,499	+	5	120	77.77	-2.88	0.40	0.995487
5704	3R_DroMel_CAF1	14,930,382 – 14,930,499	- - - - - - - - -	9335	14,930,382 – 14,930,499	-	5	120	77.77	-2.03	0.46	0.761017
5705	3R_DroMel_CAF1	14,930,962 – 14,931,082	- - - - - - - - -	9336	14,930,962 – 14,931,082	+	5	120	97.33	-1.19	0.97	0.733619
5706	3R_DroMel_CAF1	14,932,044 – 14,932,149	- - - - - - - - -	9337	14,932,044 – 14,932,149	+	5	120	88.73	-1.54	0.89	0.849357
5707	3R_DroMel_CAF1	14,932,183 – 14,932,336	- - - - - - - - -	9338	14,932,183 – 14,932,299	-	5	120	88.14	-1.72	0.78	0.746330
5707	3R_DroMel_CAF1	14,932,183 – 14,932,336	- - - - - - - - -	9339	14,932,219 – 14,932,336	-	5	120	94.27	-1.29	0.87	0.689245
5708	3R_DroMel_CAF1	14,932,763 – 14,932,923	- - - - - - - - -	9340	14,932,763 – 14,932,883	+	5	120	97.00	-1.43	0.90	0.834229
5708	3R_DroMel_CAF1	14,932,763 – 14,932,923	- - - - - - - - -	9341	14,932,803 – 14,932,923	-	5	120	89.11	-2.70	0.87	0.999171
5709	3R_DroMel_CAF1	14,933,823 – 14,933,924	- - - - - - - - -	9342	14,933,823 – 14,933,924	-	5	120	84.34	-2.37	0.63	0.800762
5710	3R_DroMel_CAF1	14,934,080 – 14,934,195	- - - - - - - - -	9343	14,934,080 – 14,934,195	+	5	120	92.75	-1.29	0.86	0.635696
5710	3R_DroMel_CAF1	14,934,080 – 14,934,195	- - - - - - - - -	9344	14,934,080 – 14,934,195	-	5	120	92.75	-1.76	0.98	0.997523
5711	3R_DroMel_CAF1	14,934,355 – 14,934,462	- - - - - - - - -	9345	14,934,355 – 14,934,462	-	5	120	83.92	-1.59	0.75	0.576187
5712	3R_DroMel_CAF1	14,934,702 – 14,934,897	- - - - - - - - -	9346	14,934,702 – 14,934,807	-	5	120	84.11	-2.02	0.66	0.731654
				9347	14,934,727 – 14,934,847	-	5	120	92.74	-1.42	0.85	0.786084
				9348	14,934,807 – 14,934,897	+	5	120	78.39	-1.39	0.74	0.628600
5713	3R_DroMel_CAF1	14,934,986 – 14,935,146	- - - - - - - - -	9349	14,934,986 – 14,935,106	+	5	120	95.00	-1.21	0.87	0.530294
5713	3R_DroMel_CAF1	14,934,986 – 14,935,146	- - - - - - - - -	9350	14,935,026 – 14,935,146	+	5	120	96.16	-1.41	0.93	0.919951
5714	3R_DroMel_CAF1	14,935,179 – 14,935,295	- - - - - - - - -	9351	14,935,179 – 14,935,295	+	5	120	95.47	-1.50	0.87	0.854562
5714	3R_DroMel_CAF1	14,935,179 – 14,935,295	- - - - - - - - -	9352	14,935,179 – 14,935,295	-	5	120	95.47	-1.55	0.92	0.965846
5715	3R_DroMel_CAF1	14,935,331 – 14,935,434	- - - - - - - - -	9353	14,935,331 – 14,935,434	+	5	120	82.65	-2.42	0.51	0.720696
5716	3R_DroMel_CAF1	14,935,514 – 14,935,628	- - - - - - - - -	9354	14,935,514 – 14,935,628	+	5	120	94.84	-1.87	0.88	0.984801
5717	3R_DroMel_CAF1	14,936,510 – 14,936,630	- - - - - - - - -	9355	14,936,510 – 14,936,630	+	5	120	89.50	-1.81	0.83	0.928106
5718	3R_DroMel_CAF1	14,936,710 – 14,936,856	- - - - - - - - -	9356	14,936,710 – 14,936,816	+	5	120	86.08	-1.67	0.74	0.619135
5718	3R_DroMel_CAF1	14,936,710 – 14,936,856	- - - - - - - - -	9357	14,936,737 – 14,936,856	+	5	120	91.69	-1.64	0.74	0.500000
5719	3R_DroMel_CAF1	14,939,438 – 14,939,578	- - - - - - - - -	9358	14,939,438 – 14,939,558	-	4	120	90.83	-1.70	0.80	0.702272
5719	3R_DroMel_CAF1	14,939,438 – 14,939,578	- - - - - - - - -	9359	14,939,478 – 14,939,578	-	4	107	87.07	-1.74	0.67	0.590357
5720	3R_DroMel_CAF1	14,940,028 – 14,940,132	- - - - - - - - -	9360	14,940,028 – 14,940,132	+	4	107	89.00	-1.80	0.67	0.524686
5721	3R_DroMel_CAF1	14,940,212 – 14,940,328	- - - - - - - - -	9361	14,940,212 – 14,940,328	+	4	120	90.92	-2.20	0.70	0.580599
5722	3R_DroMel_CAF1	14,940,408 – 14,940,646	- - - - - - - - -	9362	14,940,408 – 14,940,526	-	4	120	83.55	-2.00	0.71	0.851377
				9363	14,940,487 – 14,940,606	-	4	120	88.92	-1.74	0.76	0.702460
				9364	14,940,526 – 14,940,646	+	4	120	94.44	-2.17	0.88	0.928012
				9365	14,940,526 – 14,940,646	-	4	120	94.44	-1.52	0.85	0.512127
5723	3R_DroMel_CAF1	14,941,744 – 14,941,864	- - - - - - - - -	9366	14,941,744 – 14,941,864	-	4	120	95.14	-2.00	0.84	0.756152
5724	3R_DroMel_CAF1	14,943,235 – 14,943,341	- - - - - - - - -	9367	14,943,235 – 14,943,341	-	4	120	82.09	-1.59	0.66	0.517711
5725	3R_DroMel_CAF1	14,943,421 – 14,943,535	- - - - - - - - -	9368	14,943,421 – 14,943,535	+	4	120	90.26	-2.04	0.80	0.870110
5725	3R_DroMel_CAF1	14,943,421 – 14,943,535	- - - - - - - - -	9369	14,943,421 – 14,943,535	-	4	120	90.26	-1.78	0.75	0.662956
5726	3R_DroMel_CAF1	14,943,771 – 14,943,885	- - - - - - - - -	9370	14,943,771 – 14,943,885	-	4	120	89.92	-2.27	0.86	0.962618
5727	3R_DroMel_CAF1	14,944,019 – 14,944,122	- - - - - - - - -	9371	14,944,019 – 14,944,122	-	3	106	95.60	-2.33	0.87	0.774913
5728	3R_DroMel_CAF1	14,944,765 – 14,945,079	- - - - - - - - -	9372	14,944,765 – 14,944,885	+	4	120	87.80	-1.53	0.84	0.667644
				9373	14,944,885 – 14,944,999	+	4	120	93.77	-1.71	0.80	0.527146
				9374	14,944,959 – 14,945,079	+	4	120	95.10	-3.75	0.95	0.992519
5729	3R_DroMel_CAF1	14,945,231 – 14,945,391	- - - - - - - - -	9375	14,945,231 – 14,945,351	+	4	120	87.09	-1.78	0.75	0.744382
5729	3R_DroMel_CAF1	14,945,231 – 14,945,391	- - - - - - - - -	9376	14,945,271 – 14,945,391	-	4	120	89.65	-1.47	0.81	0.582279
5730	3R_DroMel_CAF1	14,946,483 – 14,946,595	- - - - - - - - -	9377	14,946,483 – 14,946,595	+	4	120	93.53	-1.68	0.82	0.603458
5731	3R_DroMel_CAF1	14,946,949 – 14,947,056	- - - - - - - - -	9378	14,946,949 – 14,947,056	+	4	120	85.53	-1.51	0.78	0.595384
5732	3R_DroMel_CAF1	14,947,277 – 14,947,396	- - - - - - - - -	9379	14,947,277 – 14,947,396	+	4	120	92.33	-1.75	0.86	0.807200
5733	3R_DroMel_CAF1	14,947,494 – 14,947,613	- - - - - - - - -	9380	14,947,494 – 14,947,613	+	4	120	92.92	-2.59	0.80	0.908918
5733	3R_DroMel_CAF1	14,947,494 – 14,947,613	- - - - - - - - -	9381	14,947,494 – 14,947,613	-	4	120	92.92	-1.27	0.95	0.518753
5734	3R_DroMel_CAF1	14,947,729 – 14,947,949	- - - - - - - - -	9382	14,947,729 – 14,947,841	-	4	120	85.26	-2.03	0.67	0.780909
				9383	14,947,761 – 14,947,881	+	4	120	92.47	-1.67	0.84	0.717441
				9384	14,947,761 – 14,947,881	-	4	120	92.47	-2.04	0.83	0.866902
				9385	14,947,801 – 14,947,909	+	4	120	88.70	-2.34	0.72	0.844053
				9386	14,947,841 – 14,947,949	-	4	120	91.63	-2.66	0.86	0.979838
5735	3R_DroMel_CAF1	14,947,987 – 14,948,106	- - - - - - - - -	9387	14,947,987 – 14,948,106	+	4	120	91.90	-1.99	0.79	0.774333
5736	3R_DroMel_CAF1	14,948,266 – 14,948,654	- - - - - - - - -	9388	14,948,266 – 14,948,383	+	3	120	94.12	-2.12	0.85	0.633060
				9389	14,948,306 – 14,948,423	+	4	120	94.37	-1.95	0.91	0.915851
				9390	14,948,343 – 14,948,463	+	4	120	86.64	-2.96	0.70	0.953024
				9391	14,948,343 – 14,948,463	-	4	120	86.64	-2.00	0.77	0.862279
				9392	14,948,383 – 14,948,503	-	4	120	88.47	-1.60	0.77	0.650962
				9393	14,948,423 – 14,948,543	-	4	120	87.09	-1.55	0.71	0.581030
				9394	14,948,503 – 14,948,623	-	4	120	94.40	-1.90	0.83	0.715518
				9395	14,948,543 – 14,948,654	+	4	111	94.89	-1.46	0.94	0.632648
				9396	14,948,543 – 14,948,654	-	4	111	94.89	-1.59	0.92	0.711366
5737	3R_DroMel_CAF1	14,949,161 – 14,949,266	- - - - - - - - -	9397	14,949,161 – 14,949,266	+	3	120	78.93	-2.78	0.67	0.995476
5738	3R_DroMel_CAF1	14,949,306 – 14,949,538	- - - - - - - - -	9398	14,949,306 – 14,949,426	+	4	120	95.76	-1.57	0.95	0.708370
				9399	14,949,386 – 14,949,506	+	4	120	97.50	-2.47	0.90	0.893057
				9400	14,949,386 – 14,949,506	-	4	120	97.50	-3.58	0.94	0.964014
				9401	14,949,426 – 14,949,538	+	4	112	97.32	-2.00	0.88	0.691928
5739	3R_DroMel_CAF1	14,949,572 – 14,949,683	- - - - - - - - -	9402	14,949,572 – 14,949,683	-	3	111	87.12	-2.29	0.78	0.761716
5740	3R_DroMel_CAF1	14,949,734 – 14,949,866	- - - "knownCDS=Parent=FBtr0083729;Name=CG6040-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6040-RA" - - - - -	9403	14,949,734 – 14,949,840	+	6	111	83.53	-1.84	0.68	0.524223
				9404	14,949,734 – 14,949,840	-	6	111	83.53	-2.57	0.67	0.705352
				9405	14,949,774 – 14,949,866	+	6	92	82.25	-2.26	0.70	0.808410
				9406	14,949,774 – 14,949,866	-	6	92	82.25	-1.74	0.76	0.733974
5741	3R_DroMel_CAF1	14,954,969 – 14,955,117	- - - "knownCDS=Parent=FBtr0083729;Name=CG6040-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6040-RA" - - - - -	9407	14,954,969 – 14,955,067	+	6	107	80.66	-1.49	0.67	0.636001
				9408	14,954,969 – 14,955,067	-	6	107	80.66	-2.00	0.60	0.730525
				9409	14,955,027 – 14,955,117	-	6	96	80.03	-1.89	0.67	0.846921
5742	3R_DroMel_CAF1	14,956,649 – 14,956,740	- - - - - - - - -	9410	14,956,649 – 14,956,740	+	6	104	80.83	-1.19	0.83	0.588175
5743	3R_DroMel_CAF1	14,958,429 – 14,958,542	- - - - - - - - -	9411	14,958,429 – 14,958,542	-	4	113	85.18	-2.52	0.66	0.898394
5744	3R_DroMel_CAF1	14,958,797 – 14,958,917	- - - "knownCDS=Parent=FBtr0083730;Name=Cyp12a5-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11821-RA" - - - - -	9412	14,958,797 – 14,958,917	+	6	120	85.00	-2.19	0.75	0.603281
5745	3R_DroMel_CAF1	14,959,168 – 14,959,288	- - - "knownCDS=Parent=FBtr0083730;Name=Cyp12a5-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11821-RA" - - - - -	9413	14,959,168 – 14,959,288	-	6	120	80.50	-1.86	0.70	0.834423
5746	3R_DroMel_CAF1	14,966,083 – 14,966,197	- - - - - - - - -	9414	14,966,083 – 14,966,197	+	6	120	80.92	-1.79	0.59	0.557547
5747	3R_DroMel_CAF1	14,967,898 – 14,968,009	- - - "knownCDS=Parent=FBtr0083752, FBtr0083753;Name=CG5629-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5629-RA, FlyBase+Annotation+IDs:CG5629-RB" - - - - -	9415	14,967,898 – 14,968,009	+	6	120	79.68	-1.54	0.66	0.720525
5747	3R_DroMel_CAF1	14,967,898 – 14,968,009		9416	14,967,898 – 14,968,009	-	6	120	79.68	-1.61	0.69	0.799476
5748	3R_DroMel_CAF1	14,969,239 – 14,969,341	- - - - - - - - -	9417	14,969,239 – 14,969,341	+	6	113	78.96	-2.15	0.55	0.817932
5748	3R_DroMel_CAF1	14,969,239 – 14,969,341	- - - - - - - - -	9418	14,969,239 – 14,969,341	-	6	113	78.96	-2.07	0.57	0.836280
5749	3R_DroMel_CAF1	14,969,654 – 14,969,748	- - - - - - - - -	9419	14,969,654 – 14,969,748	+	6	105	80.27	-2.02	0.54	0.604643
5750	3R_DroMel_CAF1	14,969,857 – 14,969,989	- - - - - - - - -	9420	14,969,857 – 14,969,957	+	5	116	67.33	-1.79	0.43	0.716410
5750	3R_DroMel_CAF1	14,969,857 – 14,969,989	- - - - - - - - -	9421	14,969,889 – 14,969,989	+	6	108	80.13	-1.24	0.69	0.564507
5751	3R_DroMel_CAF1	14,975,304 – 14,975,399	- - - - - - - - -	9422	14,975,304 – 14,975,399	+	4	95	85.61	-1.88	0.82	0.859006
5752	3R_DroMel_CAF1	14,976,530 – 14,976,620	- - - - - - - - -	9423	14,976,530 – 14,976,620	-	5	90	85.52	-2.13	0.61	0.537360
5753	3R_DroMel_CAF1	14,979,948 – 14,980,101	- - - - - - - - -	9424	14,979,948 – 14,980,061	-	5	113	80.71	-2.93	0.73	0.996060
5753	3R_DroMel_CAF1	14,979,948 – 14,980,101	- - - - - - - - -	9425	14,979,983 – 14,980,101	-	5	118	86.95	-2.28	0.78	0.948615
5754	3R_DroMel_CAF1	14,983,499 – 14,983,632	- - "RNAmicro=f:14983499_t:14983612_strand:-_p:0.505532" "knownCDS=Parent=FBtr0083732;Name=nos-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5637-RA" - - - - -	9426	14,983,499 – 14,983,598	+	6	114	77.04	-3.43	0.62	0.994762
				9427	14,983,499 – 14,983,598	-	6	114	77.04	-3.90	0.57	0.996805
				9428	14,983,521 – 14,983,632	+	6	114	78.61	-2.93	0.61	0.982267
				9429	14,983,521 – 14,983,632	-	6	114	78.61	-2.86	0.49	0.961409
5755	3R_DroMel_CAF1	14,984,564 – 14,984,695	- - - "knownCDS=Parent=FBtr0083732;Name=nos-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5637-RA" - - - - -	9430	14,984,564 – 14,984,667	+	6	106	78.27	-1.71	0.66	0.855016
5755	3R_DroMel_CAF1	14,984,564 – 14,984,695		9431	14,984,598 – 14,984,695	+	6	100	78.71	-1.37	0.72	0.771605
5756	3R_DroMel_CAF1	14,984,803 – 14,984,963	- - - "knownCDS=Parent=FBtr0083732;Name=nos-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5637-RA" - - - - -	9432	14,984,803 – 14,984,923	+	6	120	78.89	-1.65	0.59	0.616207
				9433	14,984,803 – 14,984,923	-	6	120	78.89	-1.59	0.57	0.510887
				9434	14,984,843 – 14,984,963	-	6	120	79.39	-1.50	0.67	0.726184
5757	3R_DroMel_CAF1	14,987,305 – 14,987,407	- - - "knownCDS=Parent=FBtr0083748;Name=CG5558-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5558-RB" - - - - -	9435	14,987,305 – 14,987,407	-	6	105	82.27	-2.18	0.57	0.528971
5758	3R_DroMel_CAF1	14,989,929 – 14,990,049	- - - - - - - - -	9436	14,989,929 – 14,990,049	-	5	120	95.20	-1.15	0.94	0.680820
5759	3R_DroMel_CAF1	14,990,087 – 14,990,202	- - - - - - - - -	9437	14,990,087 – 14,990,202	+	5	120	90.92	-1.98	0.83	0.967147
5760	3R_DroMel_CAF1	14,990,657 – 14,990,762	- - - - - - - - -	9438	14,990,657 – 14,990,762	-	4	120	84.70	-1.73	0.64	0.559514
5761	3R_DroMel_CAF1	14,991,797 – 14,992,019	- - - - - - - - -	9439	14,991,797 – 14,991,899	+	4	113	85.81	-1.45	0.70	0.529397
				9440	14,991,837 – 14,991,939	-	4	113	87.99	-1.98	0.73	0.796221
				9441	14,991,864 – 14,991,979	+	5	120	93.85	-2.67	0.94	0.999945
				9442	14,991,864 – 14,991,979	-	5	120	93.85	-3.05	0.88	0.999849
				9443	14,991,899 – 14,992,019	+	5	120	91.50	-1.17	0.90	0.562729
5762	3R_DroMel_CAF1	14,992,091 – 14,992,207	- - - - - - - - -	9444	14,992,091 – 14,992,207	+	5	120	94.64	-1.91	0.76	0.555450
5763	3R_DroMel_CAF1	14,993,110 – 14,993,268	- - - - - - - - -	9445	14,993,110 – 14,993,228	-	3	120	93.30	-2.31	0.91	0.905251
				9446	14,993,148 – 14,993,268	+	3	120	98.89	-3.03	0.97	0.983477
				9447	14,993,148 – 14,993,268	-	3	120	98.89	-2.93	1.01	0.990093
5764	3R_DroMel_CAF1	14,996,321 – 14,996,412	- - - - - - - - -	9448	14,996,321 – 14,996,412	+	6	92	84.89	-1.89	0.74	0.510527
5765	3R_DroMel_CAF1	14,996,545 – 14,996,646	- - - - - - - - -	9449	14,996,545 – 14,996,646	+	6	119	68.56	-1.93	0.37	0.796550
5766	3R_DroMel_CAF1	15,000,077 – 15,000,173	- - - - - - - - -	9450	15,000,077 – 15,000,173	-	6	104	81.81	-2.06	0.58	0.564669
5767	3R_DroMel_CAF1	15,007,970 – 15,008,085	- - - - - - - - -	9451	15,007,970 – 15,008,085	-	5	115	88.51	-1.69	0.71	0.526538
5768	3R_DroMel_CAF1	15,010,773 – 15,010,871	- - - - - - - - -	9452	15,010,773 – 15,010,871	-	6	104	82.92	-1.55	0.69	0.506266
5769	3R_DroMel_CAF1	15,013,459 – 15,013,554	- - - - - - - - -	9453	15,013,459 – 15,013,554	-	5	120	62.64	-2.38	0.31	0.739659
5770	3R_DroMel_CAF1	15,016,056 – 15,016,151	- - - "knownCDS=Parent=FBtr0083735;Name=CG31475-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31475-RA" - - - - -	9454	15,016,056 – 15,016,151	+	5	95	94.74	-2.76	0.84	0.997427
5770	3R_DroMel_CAF1	15,016,056 – 15,016,151		9455	15,016,056 – 15,016,151	-	5	95	94.74	-1.35	0.86	0.695672
5771	3R_DroMel_CAF1	15,031,122 – 15,031,220	- - - - - - - - -	9456	15,031,122 – 15,031,220	+	3	104	74.92	-1.52	0.65	0.760668
5772	3R_DroMel_CAF1	15,031,846 – 15,031,958	- - - - - - - - -	9457	15,031,846 – 15,031,958	-	4	120	77.01	-2.56	0.64	0.995106
5773	3R_DroMel_CAF1	15,045,238 – 15,045,331	- - "RNAmicro=f:15045238_t:15045337_strand:+_p:0.977575" - - - - - -	9458	15,045,238 – 15,045,331	+	6	100	72.24	-2.55	0.32	0.961357
5773	3R_DroMel_CAF1	15,045,238 – 15,045,331		9459	15,045,238 – 15,045,331	-	6	100	72.24	-3.27	0.52	0.998991
5774	3R_DroMel_CAF1	15,045,891 – 15,046,044	- - - - - - - - -	9460	15,045,891 – 15,046,008	-	5	117	89.31	-1.83	0.73	0.658240
5774	3R_DroMel_CAF1	15,045,891 – 15,046,044	- - - - - - - - -	9461	15,045,931 – 15,046,044	-	5	113	90.09	-2.27	0.85	0.994654
5775	3R_DroMel_CAF1	15,047,334 – 15,047,434	- - - - - - - - -	9462	15,047,334 – 15,047,434	+	5	101	89.56	-1.83	0.87	0.963730
5776	3R_DroMel_CAF1	15,052,321 – 15,052,437	- - - - - - - - -	9463	15,052,321 – 15,052,437	+	5	116	92.59	-1.66	0.80	0.791282
5777	3R_DroMel_CAF1	15,054,883 – 15,054,991	- - - - - - - - -	9464	15,054,883 – 15,054,991	+	5	110	81.17	-1.99	0.57	0.661031
5778	3R_DroMel_CAF1	15,058,642 – 15,058,736	- - - - - - - - -	9465	15,058,642 – 15,058,736	+	6	106	75.98	-1.55	0.69	0.913657
5779	3R_DroMel_CAF1	15,064,560 – 15,064,680	- - - "knownCDS=Parent=FBtr0083742;Name=CG5237-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5237-RA" - - - - -	9466	15,064,560 – 15,064,680	+	6	120	82.22	-1.89	0.60	0.519690
5780	3R_DroMel_CAF1	15,070,259 – 15,070,365	- - - "knownCDS=Parent=FBtr0083742;Name=CG5237-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5237-RA" - - - - -	9467	15,070,259 – 15,070,365	+	6	106	78.60	-1.81	0.54	0.605714
5781	3R_DroMel_CAF1	15,071,243 – 15,071,404	- - - "knownCDS=Parent=FBtr0083742;Name=CG5237-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5237-RA" - - - - -	9468	15,071,243 – 15,071,333	+	6	92	78.87	-1.87	0.87	0.937666
				9469	15,071,243 – 15,071,333	-	6	92	78.87	-2.17	0.83	0.956566
				9470	15,071,255 – 15,071,373	+	6	120	86.07	-1.62	0.88	0.742084
				9471	15,071,255 – 15,071,373	-	6	120	86.07	-1.62	0.84	0.599154
				9472	15,071,293 – 15,071,404	+	6	116	88.52	-2.07	0.80	0.564031
5782	3R_DroMel_CAF1	15,076,832 – 15,077,027	- - - - - - - - -	9473	15,076,832 – 15,076,930	+	6	120	80.29	-1.67	0.58	0.520531
				9474	15,076,868 – 15,076,959	+	4	102	82.73	-2.21	0.69	0.920237
				9475	15,076,902 – 15,076,992	+	3	97	78.52	-1.82	0.63	0.719362
				9476	15,076,930 – 15,077,027	+	3	104	79.34	-2.09	0.65	0.898463
5783	3R_DroMel_CAF1	15,078,864 – 15,078,955	- - - - - - - - -	9477	15,078,864 – 15,078,955	+	6	101	82.97	-3.33	0.61	0.849868
5783	3R_DroMel_CAF1	15,078,864 – 15,078,955	- - - - - - - - -	9478	15,078,864 – 15,078,955	-	6	101	82.97	-2.70	0.76	0.882046
5784	3R_DroMel_CAF1	15,080,439 – 15,080,572	- - - - - - - - -	9479	15,080,439 – 15,080,542	+	4	103	87.54	-2.09	0.72	0.826323
				9480	15,080,462 – 15,080,572	+	4	110	91.97	-1.90	0.79	0.733039
				9481	15,080,462 – 15,080,572	-	4	110	91.97	-2.08	0.86	0.926962
5785	3R_DroMel_CAF1	15,082,777 – 15,082,871	- - - - - - - - -	9482	15,082,777 – 15,082,871	+	6	120	75.15	-2.07	0.52	0.913434
5786	3R_DroMel_CAF1	15,087,811 – 15,087,915	- - - - - - - - -	9483	15,087,811 – 15,087,915	+	6	115	76.17	-2.05	0.46	0.735536
5786	3R_DroMel_CAF1	15,087,811 – 15,087,915	- - - - - - - - -	9484	15,087,811 – 15,087,915	-	6	115	76.17	-2.36	0.43	0.891535
5787	3R_DroMel_CAF1	15,090,233 – 15,090,328	- - - - - - - - -	9485	15,090,233 – 15,090,328	+	6	101	80.26	-1.58	0.61	0.557754
5788	3R_DroMel_CAF1	15,105,722 – 15,105,828	- - - - - - - - -	9486	15,105,722 – 15,105,828	-	6	106	90.75	-1.05	0.94	0.611888
5789	3R_DroMel_CAF1	15,109,702 – 15,109,830	- - - - - - - - -	9487	15,109,702 – 15,109,798	+	5	100	85.71	-1.55	0.72	0.506850
5789	3R_DroMel_CAF1	15,109,702 – 15,109,830	- - - - - - - - -	9488	15,109,727 – 15,109,830	+	6	103	89.89	-2.50	0.78	0.586491
5790	3R_DroMel_CAF1	15,110,810 – 15,110,923	- - - - - - - - -	9489	15,110,810 – 15,110,923	+	6	120	92.38	-1.94	0.84	0.717307
5791	3R_DroMel_CAF1	15,112,039 – 15,112,137	- - - - - - - - -	9490	15,112,039 – 15,112,137	-	6	111	79.88	-1.84	0.63	0.777702
5792	3R_DroMel_CAF1	15,113,650 – 15,113,743	- - - - - - - - -	9491	15,113,650 – 15,113,743	+	6	93	81.24	-2.61	0.67	0.905065
5792	3R_DroMel_CAF1	15,113,650 – 15,113,743	- - - - - - - - -	9492	15,113,650 – 15,113,743	-	6	93	81.24	-3.65	0.65	0.962644
5793	3R_DroMel_CAF1	15,118,097 – 15,118,197	- - - - - - - - -	9493	15,118,097 – 15,118,197	-	6	100	93.73	-1.64	0.90	0.934292
5794	3R_DroMel_CAF1	15,120,834 – 15,120,960	- - - - - - - - -	9494	15,120,834 – 15,120,947	-	6	119	82.36	-2.30	0.77	0.868616
				9495	15,120,867 – 15,120,960	+	6	99	82.77	-2.97	0.66	0.847001
				9496	15,120,867 – 15,120,960	-	6	99	82.77	-4.02	0.72	0.951295
5795	3R_DroMel_CAF1	15,122,416 – 15,122,519	- - - - - - - - -	9497	15,122,416 – 15,122,519	-	6	110	86.46	-3.13	0.71	0.635838
5796	3R_DroMel_CAF1	15,127,297 – 15,127,400	- - - - - - - - -	9498	15,127,297 – 15,127,400	+	5	111	75.79	-1.08	0.80	0.801641
5797	3R_DroMel_CAF1	15,135,547 – 15,135,637	- - - - - - - - -	9499	15,135,547 – 15,135,637	-	5	91	89.91	-2.07	0.87	0.989839
5798	3R_DroMel_CAF1	15,143,544 – 15,143,636	- - - - - - - - -	9500	15,143,544 – 15,143,636	+	5	95	91.58	-1.52	0.77	0.535903
5799	3R_DroMel_CAF1	15,144,535 – 15,144,641	- - - - - - - - -	9501	15,144,535 – 15,144,641	-	4	114	81.83	-1.78	0.67	0.687051
5800	3R_DroMel_CAF1	15,151,172 – 15,151,286	- - - "knownCDS=Parent=FBtr0083739;Name=Dl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3619-RA" - - - - -	9502	15,151,172 – 15,151,286	-	6	117	76.60	-1.03	0.74	0.713013
5801	3R_DroMel_CAF1	15,151,561 – 15,151,658	- - - - - - - - -	9503	15,151,561 – 15,151,658	-	5	98	94.53	-2.29	0.90	0.999067
5802	3R_DroMel_CAF1	15,151,854 – 15,151,970	- - - - - - - - -	9504	15,151,854 – 15,151,970	+	5	120	93.01	-2.11	0.87	0.994459
5803	3R_DroMel_CAF1	15,152,706 – 15,152,866	- - - - - - - - -	9505	15,152,706 – 15,152,826	+	3	120	94.44	-1.87	0.89	0.620987
				9506	15,152,706 – 15,152,826	-	3	120	94.44	-2.39	0.94	0.946951
				9507	15,152,746 – 15,152,866	+	3	120	95.00	-3.35	0.97	0.992946
				9508	15,152,746 – 15,152,866	-	3	120	95.00	-3.93	0.96	0.989884
5804	3R_DroMel_CAF1	15,154,413 – 15,154,507	- - - - - - - - -	9509	15,154,413 – 15,154,507	-	5	97	69.97	-2.27	0.56	0.993746
5805	3R_DroMel_CAF1	15,157,586 – 15,157,676	- - - - - - - - -	9510	15,157,586 – 15,157,676	+	5	90	90.32	-1.41	0.81	0.597832
5806	3R_DroMel_CAF1	15,159,587 – 15,159,718	- - - - - - - - -	9511	15,159,587 – 15,159,679	+	6	107	83.56	-2.93	0.67	0.773595
				9512	15,159,587 – 15,159,679	-	6	107	83.56	-2.54	0.70	0.748042
				9513	15,159,605 – 15,159,718	+	5	114	91.34	-2.22	0.70	0.578088
5807	3R_DroMel_CAF1	15,169,760 – 15,169,882	- - - - - - - - -	9514	15,169,760 – 15,169,855	+	6	95	78.51	-1.60	0.70	0.857744
				9515	15,169,760 – 15,169,855	-	6	95	78.51	-1.92	0.60	0.842475
				9516	15,169,777 – 15,169,882	+	6	110	76.75	-1.53	0.62	0.746653
				9517	15,169,777 – 15,169,882	-	6	110	76.75	-2.53	0.57	0.981089
5808	3R_DroMel_CAF1	15,179,177 – 15,179,267	- - - - - - - - -	9518	15,179,177 – 15,179,267	+	6	104	82.09	-2.26	0.75	0.860756
5809	3R_DroMel_CAF1	15,183,661 – 15,183,767	- - - - - - - - -	9519	15,183,661 – 15,183,767	-	4	106	84.43	-1.60	0.69	0.595525
5810	3R_DroMel_CAF1	15,187,428 – 15,187,523	- - - - - - - - -	9520	15,187,428 – 15,187,523	-	6	112	81.72	-1.26	0.74	0.534176
5811	3R_DroMel_CAF1	15,188,386 – 15,188,480	- - - - - - - - -	9521	15,188,386 – 15,188,480	+	6	120	80.60	-3.06	0.34	0.509547
5812	3R_DroMel_CAF1	15,191,706 – 15,191,802	- - - - - - - - -	9522	15,191,706 – 15,191,802	-	6	96	95.52	-2.44	0.83	0.895989
5813	3R_DroMel_CAF1	15,198,823 – 15,198,917	- - - - - - - - -	9523	15,198,823 – 15,198,917	-	6	110	79.57	-1.85	0.59	0.711064
5814	3R_DroMel_CAF1	15,198,988 – 15,199,113	- - - - - - - - -	9524	15,198,988 – 15,199,099	+	6	118	79.74	-1.86	0.64	0.814649
5814	3R_DroMel_CAF1	15,198,988 – 15,199,113	- - - - - - - - -	9525	15,199,022 – 15,199,113	+	6	120	76.48	-2.05	0.68	0.970450
5815	3R_DroMel_CAF1	15,201,165 – 15,201,316	- - - "knownCDS=Parent=FBtr0083774;Name=CG31404-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31404-RA" - - - - -	9526	15,201,165 – 15,201,279	+	6	114	86.67	-3.21	0.92	0.997916
				9527	15,201,165 – 15,201,279	-	6	114	86.67	-2.03	0.78	0.513047
				9528	15,201,205 – 15,201,316	+	6	114	83.81	-1.73	0.87	0.788355
5816	3R_DroMel_CAF1	15,202,419 – 15,202,517	- - - - - - - - -	9529	15,202,419 – 15,202,517	+	6	119	67.56	-2.40	0.41	0.987691
5817	3R_DroMel_CAF1	15,202,652 – 15,202,767	- - "RNAmicro=f:15202652_t:15202766_strand:+_p:0.956654" "knownCDS=Parent=FBtr0083773;Name=CG31245-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31245-RA" - - - - -	9530	15,202,652 – 15,202,767	+	6	115	83.65	-2.58	0.78	0.865342
5818	3R_DroMel_CAF1	15,205,751 – 15,205,846	- - - - - - - - -	9531	15,205,751 – 15,205,846	-	6	95	95.86	-1.56	0.93	0.973903
5819	3R_DroMel_CAF1	15,216,910 – 15,217,030	- - - "knownCDS=Parent=FBtr0083756;Name=CG18493-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18493-RA" - - - - -	9532	15,216,910 – 15,217,030	+	6	120	75.67	-1.84	0.53	0.775774
5820	3R_DroMel_CAF1	15,229,782 – 15,229,886	- - - "knownCDS=Parent=FBtr0083759;Name=CG5316-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5316-RA" - - - - -	9533	15,229,782 – 15,229,886	-	6	118	70.84	-1.98	0.40	0.840656
5821	3R_DroMel_CAF1	15,232,749 – 15,232,854	- - - - - - - - -	9534	15,232,749 – 15,232,854	-	4	107	85.06	-1.59	0.76	0.644716
5822	3R_DroMel_CAF1	15,236,724 – 15,236,840	- - - - - - - - -	9535	15,236,724 – 15,236,840	-	5	116	86.75	-1.88	0.69	0.619214
5823	3R_DroMel_CAF1	15,237,106 – 15,237,225	- - - - - - - - -	9536	15,237,106 – 15,237,225	-	5	119	97.14	-2.23	0.97	0.999600
5824	3R_DroMel_CAF1	15,237,425 – 15,237,584	- - - - - - - - -	9537	15,237,425 – 15,237,545	+	5	120	93.10	-1.33	0.82	0.532337
5824	3R_DroMel_CAF1	15,237,425 – 15,237,584	- - - - - - - - -	9538	15,237,465 – 15,237,584	+	5	120	92.46	-1.73	0.91	0.986867
5825	3R_DroMel_CAF1	15,238,116 – 15,238,236	- - - - - - - - -	9539	15,238,116 – 15,238,236	-	5	120	94.30	-1.38	0.92	0.917587
5826	3R_DroMel_CAF1	15,244,762 – 15,244,974	- - - - - - - - -	9540	15,244,762 – 15,244,872	-	6	110	77.73	-1.58	0.62	0.746520
5826	3R_DroMel_CAF1	15,244,762 – 15,244,974	- - - - - - - - -	9541	15,244,872 – 15,244,974	-	6	102	80.21	-1.32	0.66	0.534375
5827	3R_DroMel_CAF1	15,251,699 – 15,251,789	- - - - - - - - -	9542	15,251,699 – 15,251,789	+	5	90	92.44	-1.54	0.84	0.830644
5828	3R_DroMel_CAF1	15,254,585 – 15,254,682	- - - - - - - - -	9543	15,254,585 – 15,254,682	+	6	97	94.85	-2.39	0.94	0.999587
5829	3R_DroMel_CAF1	15,277,412 – 15,277,506	- - - - - - - - -	9544	15,277,412 – 15,277,506	+	5	105	75.15	-1.19	0.00	0.556149
5830	3R_DroMel_CAF1	15,278,234 – 15,278,327	- - - - - - - - -	9545	15,278,234 – 15,278,327	+	5	98	74.63	-1.66	0.14	0.779259
5831	3R_DroMel_CAF1	15,278,828 – 15,278,926	- - - - - - - - -	9546	15,278,828 – 15,278,926	-	6	116	74.25	-2.45	0.28	0.725420
5832	3R_DroMel_CAF1	15,281,923 – 15,282,025	- - - - - - - - -	9547	15,281,923 – 15,282,025	+	3	104	80.00	-1.78	0.69	0.755924
5833	3R_DroMel_CAF1	15,283,041 – 15,283,133	- - - - - - - - -	9548	15,283,041 – 15,283,133	+	6	101	84.14	-2.18	0.94	0.972616
5834	3R_DroMel_CAF1	15,285,433 – 15,285,574	- - - - - - - - -	9549	15,285,433 – 15,285,543	+	6	112	85.58	-3.69	0.87	0.990323
				9550	15,285,433 – 15,285,543	-	6	112	85.58	-2.03	0.82	0.745774
				9551	15,285,467 – 15,285,574	+	6	112	84.66	-3.11	0.80	0.932386
5835	3R_DroMel_CAF1	15,287,695 – 15,287,814	- - - "knownCDS=Parent=FBtr0083769;Name=CG6255-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6255-RA" - - - - -	9552	15,287,695 – 15,287,814	+	5	119	94.79	-1.26	0.90	0.751380
5836	3R_DroMel_CAF1	15,287,854 – 15,288,014	- - - "knownCDS=Parent=FBtr0083769;Name=CG6255-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6255-RA" - - - - -	9553	15,287,854 – 15,287,974	-	5	120	92.67	-1.29	0.89	0.752823
5836	3R_DroMel_CAF1	15,287,854 – 15,288,014		9554	15,287,894 – 15,288,014	-	5	120	95.00	-1.30	0.90	0.788409
5837	3R_DroMel_CAF1	15,288,374 – 15,288,494	- - - "knownCDS=Parent=FBtr0083769;Name=CG6255-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6255-RA" - - - - -	9555	15,288,374 – 15,288,494	-	5	120	94.17	-1.45	0.87	0.836042
5838	3R_DroMel_CAF1	15,288,716 – 15,288,832	- - - - - - - - -	9556	15,288,716 – 15,288,832	-	5	120	86.60	-2.01	0.70	0.708418
5839	3R_DroMel_CAF1	15,292,546 – 15,292,650	- - - - - - - - -	9557	15,292,546 – 15,292,650	-	5	104	87.67	-1.69	0.74	0.624760
5840	3R_DroMel_CAF1	15,294,871 – 15,294,970	- - - - - - - - -	9558	15,294,871 – 15,294,970	-	3	99	97.29	-2.04	0.90	0.725542
5841	3R_DroMel_CAF1	15,295,450 – 15,295,542	- - - - - - - - -	9559	15,295,450 – 15,295,542	+	6	115	81.87	-1.39	0.73	0.583150
5842	3R_DroMel_CAF1	15,296,493 – 15,296,588	- - - - - - - - -	9560	15,296,493 – 15,296,588	+	5	100	75.26	-1.98	0.24	0.907685
5842	3R_DroMel_CAF1	15,296,493 – 15,296,588	- - - - - - - - -	9561	15,296,493 – 15,296,588	-	5	100	75.26	-2.95	0.33	0.999091
5843	3R_DroMel_CAF1	15,298,158 – 15,298,251	- - - - - - - - -	9562	15,298,158 – 15,298,251	-	4	94	84.66	-1.67	0.67	0.604657
5844	3R_DroMel_CAF1	15,300,364 – 15,300,457	- - - - - - - - -	9563	15,300,364 – 15,300,457	-	6	99	75.82	-2.82	0.45	0.988218
5845	3R_DroMel_CAF1	15,305,274 – 15,305,394	- - - "knownCDS=Parent=FBtr0083764;Name=Dys-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31175-RA" - - - - -	9564	15,305,274 – 15,305,394	-	6	120	75.83	-1.86	0.46	0.539474
5846	3R_DroMel_CAF1	15,309,932 – 15,310,031	- - - "knownCDS=Parent=FBtr0083764;Name=Dys-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31175-RA" - - - - -	9565	15,309,932 – 15,310,031	-	6	99	81.38	-2.65	0.68	0.905415
5847	3R_DroMel_CAF1	15,315,390 – 15,315,483	- - "RNAmicro=f:15315390_t:15315483_strand:+_p:0.990901" - - - - - -	9566	15,315,390 – 15,315,483	+	5	94	84.15	-2.20	0.63	0.750544
5847	3R_DroMel_CAF1	15,315,390 – 15,315,483		9567	15,315,390 – 15,315,483	-	5	94	84.15	-2.96	0.94	0.999262
5848	3R_DroMel_CAF1	15,325,057 – 15,325,155	- - - - - - - - -	9568	15,325,057 – 15,325,155	-	6	110	78.45	-1.79	0.54	0.579563
5849	3R_DroMel_CAF1	15,329,710 – 15,329,803	- - - "knownCDS=Parent=FBtr0083766;Name=Dys-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31175-RB" - - - - -	9569	15,329,710 – 15,329,803	-	6	117	77.03	-1.45	0.62	0.684454
5850	3R_DroMel_CAF1	15,330,511 – 15,330,776	- - - "knownCDS=Parent=FBtr0083766;Name=Dys-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31175-RB" - - - - -	9570	15,330,511 – 15,330,607	+	6	102	80.52	-1.85	0.66	0.779421
				9571	15,330,551 – 15,330,644	+	6	102	76.85	-1.58	0.64	0.823448
				9572	15,330,585 – 15,330,684	+	6	111	73.71	-2.05	0.64	0.982594
				9573	15,330,607 – 15,330,724	+	6	120	79.90	-1.90	0.63	0.806559
				9574	15,330,607 – 15,330,724	-	6	120	79.90	-1.61	0.58	0.500000
				9575	15,330,684 – 15,330,776	+	6	116	78.19	-1.94	0.55	0.773598
5851	3R_DroMel_CAF1	15,333,561 – 15,333,665	- - - - - - - - -	9576	15,333,561 – 15,333,665	-	6	107	77.66	-2.80	0.50	0.976727
5852	3R_DroMel_CAF1	15,334,586 – 15,334,677	- - - - - - - - -	9577	15,334,586 – 15,334,677	-	6	102	75.33	-1.98	0.57	0.934535
5853	3R_DroMel_CAF1	15,335,297 – 15,335,390	- - - - - - - - -	9578	15,335,297 – 15,335,390	+	6	93	96.56	-3.85	0.91	0.999896
5854	3R_DroMel_CAF1	15,345,955 – 15,346,071	- - - - - - - - -	9579	15,345,955 – 15,346,071	+	6	117	92.84	-3.64	0.94	0.999953
5855	3R_DroMel_CAF1	15,346,625 – 15,346,715	- - - - - - - - -	9580	15,346,625 – 15,346,715	-	6	104	75.10	-1.27	0.62	0.595826
5856	3R_DroMel_CAF1	15,348,071 – 15,348,161	- - - - - - - - -	9581	15,348,071 – 15,348,161	-	6	111	75.44	-1.07	0.66	0.511313
5857	3R_DroMel_CAF1	15,350,136 – 15,350,262	- - - - - - - - -	9582	15,350,136 – 15,350,229	-	6	103	77.92	-1.74	0.65	0.867646
5857	3R_DroMel_CAF1	15,350,136 – 15,350,262	- - - - - - - - -	9583	15,350,162 – 15,350,262	-	6	108	79.87	-1.80	0.61	0.721958
5858	3R_DroMel_CAF1	15,354,052 – 15,354,156	- - - - - - - - -	9584	15,354,052 – 15,354,156	-	6	112	76.17	-1.45	0.57	0.500000
5859	3R_DroMel_CAF1	15,355,771 – 15,355,885	- - - - - - - - -	9585	15,355,771 – 15,355,885	-	6	118	79.29	-1.70	0.61	0.705941
5860	3R_DroMel_CAF1	15,360,303 – 15,360,410	- - - - - - - - -	9586	15,360,303 – 15,360,410	-	4	109	85.80	-1.55	0.84	0.665909
5861	3R_DroMel_CAF1	15,362,958 – 15,363,057	- - - - - - - - -	9587	15,362,958 – 15,363,057	+	4	99	93.10	-1.57	0.81	0.529857
5862	3R_DroMel_CAF1	15,366,653 – 15,366,750	- - - - - - - - -	9588	15,366,653 – 15,366,750	-	4	99	89.74	-1.61	0.86	0.755550
5863	3R_DroMel_CAF1	15,370,594 – 15,370,705	- - - - - - - - -	9589	15,370,594 – 15,370,705	+	6	115	77.56	-2.00	0.47	0.582171
5864	3R_DroMel_CAF1	15,372,773 – 15,372,874	- - - - - - - - -	9590	15,372,773 – 15,372,874	+	4	101	94.53	-2.38	0.91	0.971241
5865	3R_DroMel_CAF1	15,373,327 – 15,373,425	- - - - - - - - -	9591	15,373,327 – 15,373,425	+	6	113	78.00	-1.79	0.77	0.940186
5866	3R_DroMel_CAF1	15,374,010 – 15,374,116	- - - - - - - - -	9592	15,374,010 – 15,374,116	+	6	119	75.91	-1.92	0.50	0.741446
5866	3R_DroMel_CAF1	15,374,010 – 15,374,116	- - - - - - - - -	9593	15,374,010 – 15,374,116	-	6	119	75.91	-1.74	0.51	0.578261
5867	3R_DroMel_CAF1	15,376,885 – 15,376,995	- - - - - - - - -	9594	15,376,885 – 15,376,995	+	5	110	94.27	-1.55	0.85	0.864740
5868	3R_DroMel_CAF1	15,378,208 – 15,378,301	- - - - - - - - -	9595	15,378,208 – 15,378,301	-	6	117	77.34	-2.27	0.47	0.837885
5869	3R_DroMel_CAF1	15,389,791 – 15,389,898	- - - - - - - - -	9596	15,389,791 – 15,389,898	+	5	107	76.99	-1.74	0.21	0.655046
5870	3R_DroMel_CAF1	15,389,942 – 15,390,057	- - - - - - - - -	9597	15,389,942 – 15,390,057	-	5	115	93.39	-1.98	0.82	0.954480
5871	3R_DroMel_CAF1	15,391,325 – 15,391,419	- - - - - - - - -	9598	15,391,325 – 15,391,419	+	5	95	83.90	-1.90	0.66	0.644159
5872	3R_DroMel_CAF1	15,394,371 – 15,394,469	- - - - - - - - -	9599	15,394,371 – 15,394,469	-	5	99	92.99	-1.60	0.82	0.823353
5873	3R_DroMel_CAF1	15,396,724 – 15,396,827	- - - - - - - - -	9600	15,396,724 – 15,396,827	-	6	103	82.90	-1.96	0.69	0.650998
5874	3R_DroMel_CAF1	15,405,225 – 15,405,315	- - - - - - - - -	9601	15,405,225 – 15,405,315	+	5	97	80.91	-2.19	0.58	0.839660
5875	3R_DroMel_CAF1	15,412,047 – 15,412,164	- - - "knownCDS=Parent=FBtr0083767;Name=CG7344-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7344-RA" - - - - -	9602	15,412,047 – 15,412,164	-	6	120	81.69	-1.82	0.63	0.612861
5876	3R_DroMel_CAF1	15,418,631 – 15,418,748	- - - "knownCDS=Parent=FBtr0083764;Name=Dys-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31175-RA" - - - - -	9603	15,418,631 – 15,418,748	-	6	120	78.91	-1.04	0.70	0.506455
5877	3R_DroMel_CAF1	15,421,817 – 15,421,912	- - - - - - - - -	9604	15,421,817 – 15,421,912	+	6	106	78.81	-1.20	0.67	0.548244
5878	3R_DroMel_CAF1	15,427,610 – 15,427,717	- - - - - - - - -	9605	15,427,610 – 15,427,717	+	6	108	77.45	-1.75	0.54	0.606214
5879	3R_DroMel_CAF1	15,434,145 – 15,434,252	- - - "knownCDS=Parent=FBtr0083778;Name=CG17751-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17751-RA" - - - - -	9606	15,434,145 – 15,434,252	+	6	114	83.11	-1.79	0.72	0.620440
5880	3R_DroMel_CAF1	15,435,671 – 15,435,773	- - - - - - - - -	9607	15,435,671 – 15,435,773	+	6	106	75.22	-1.77	0.57	0.846809
5881	3R_DroMel_CAF1	15,437,242 – 15,437,360	- - - "knownCDS=Parent=FBtr0083779;Name=CG17752-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17752-RA" - - - - -	9608	15,437,242 – 15,437,360	+	6	118	77.34	-2.22	0.60	0.954418
5881	3R_DroMel_CAF1	15,437,242 – 15,437,360		9609	15,437,242 – 15,437,360	-	6	118	77.34	-2.57	0.69	0.984118
5882	3R_DroMel_CAF1	15,442,841 – 15,442,933	- - - - - - - - -	9610	15,442,841 – 15,442,933	+	3	106	72.04	-1.95	0.51	0.572497
5883	3R_DroMel_CAF1	15,444,836 – 15,444,939	- - - "knownCDS=Parent=FBtr0083807, FBtr0083808, FBtr0083809, FBtr0083810;Name=CG6231-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6231-RC, FlyBase+Annotation+IDs:CG6231-RD, FlyBase+Annotation+IDs:CG6231-RB, FlyBase+Annotation+IDs:CG6231-RA" - - - - -	9611	15,444,836 – 15,444,939	-	6	117	76.30	-1.47	0.68	0.867869
5884	3R_DroMel_CAF1	15,451,473 – 15,451,565	- - - - - - - - -	9612	15,451,473 – 15,451,565	+	5	92	92.13	-1.47	0.87	0.861455
5885	3R_DroMel_CAF1	15,452,164 – 15,452,256	- - - - - - - - -	9613	15,452,164 – 15,452,256	+	4	92	85.40	-1.83	0.65	0.634021
5886	3R_DroMel_CAF1	15,454,150 – 15,454,241	- - - - - - - - -	9614	15,454,150 – 15,454,241	+	6	99	68.91	-2.35	0.47	0.990244
5887	3R_DroMel_CAF1	15,455,158 – 15,455,267	- - - - - - - - -	9615	15,455,158 – 15,455,267	-	3	111	74.02	-2.20	0.51	0.700347
5888	3R_DroMel_CAF1	15,456,070 – 15,456,163	- - - - - - - - -	9616	15,456,070 – 15,456,163	+	6	101	74.15	-1.67	0.54	0.720176
5889	3R_DroMel_CAF1	15,468,100 – 15,468,204	- - "RNAmicro=f:15468100_t:15468203_strand:+_p:0.981674" - - - - - -	9617	15,468,100 – 15,468,204	+	6	104	76.87	-3.45	0.81	0.978413
5889	3R_DroMel_CAF1	15,468,100 – 15,468,204		9618	15,468,100 – 15,468,204	-	6	104	76.87	-2.29	0.62	0.973916
5890	3R_DroMel_CAF1	15,469,897 – 15,470,039	- - - "knownCDS=Parent=FBtr0083804;Name=Vha13-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6213-RA" - - - - -	9619	15,469,897 – 15,469,987	+	6	102	76.59	-1.21	0.65	0.579476
				9620	15,469,897 – 15,469,987	-	6	102	76.59	-2.23	0.71	0.980911
				9621	15,469,913 – 15,470,019	+	6	114	78.47	-1.48	0.70	0.813768
				9622	15,469,913 – 15,470,019	-	6	114	78.47	-2.18	0.72	0.958215
				9623	15,469,947 – 15,470,039	+	6	108	75.28	-1.76	0.60	0.901830
				9624	15,469,947 – 15,470,039	-	6	108	75.28	-1.81	0.62	0.928488
5891	3R_DroMel_CAF1	15,471,076 – 15,471,313	- - - "knownCDS=Parent=FBtr0083781;Name=Nup58-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7360-RA" - - - - -	9625	15,471,076 – 15,471,196	-	6	120	68.72	-2.32	0.46	0.988174
				9626	15,471,116 – 15,471,233	-	6	120	66.67	-1.71	0.37	0.582026
				9627	15,471,156 – 15,471,273	-	6	120	70.68	-2.10	0.44	0.947325
				9628	15,471,196 – 15,471,313	-	6	120	74.92	-2.04	0.47	0.828355
5892	3R_DroMel_CAF1	15,475,119 – 15,475,430	- - - - - - - - -	9629	15,475,119 – 15,475,230	-	3	120	87.50	-1.97	0.88	0.832987
				9630	15,475,190 – 15,475,310	-	4	120	77.50	-2.31	0.57	0.938141
				9631	15,475,270 – 15,475,390	-	4	120	77.78	-2.11	0.56	0.787218
				9632	15,475,310 – 15,475,430	+	4	120	79.86	-1.65	0.69	0.636426
5893	3R_DroMel_CAF1	15,475,750 – 15,475,860	- - - - - - - - -	9633	15,475,750 – 15,475,860	+	4	116	81.86	-1.83	0.67	0.734294
5894	3R_DroMel_CAF1	15,476,751 – 15,476,862	- - - - - - - - -	9634	15,476,751 – 15,476,862	-	3	111	81.60	-1.26	0.82	0.517212
5895	3R_DroMel_CAF1	15,480,780 – 15,480,900	- - - "knownCDS=Parent=FBtr0083800, FBtr0083801;Name=CG6184-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6184-RB, FlyBase+Annotation+IDs:CG6184-RA" - - - - -	9635	15,480,780 – 15,480,900	+	6	120	77.50	-2.14	0.51	0.843758
5895	3R_DroMel_CAF1	15,480,780 – 15,480,900		9636	15,480,780 – 15,480,900	-	6	120	77.50	-2.55	0.53	0.966565
5896	3R_DroMel_CAF1	15,487,968 – 15,488,071	- - - - - - - - -	9637	15,487,968 – 15,488,071	+	6	103	77.57	-1.06	0.72	0.630407
5897	3R_DroMel_CAF1	15,499,284 – 15,499,376	- - - - - - - - -	9638	15,499,284 – 15,499,376	+	6	111	81.15	-1.79	0.75	0.809740
5898	3R_DroMel_CAF1	15,506,923 – 15,507,030	- - - - - - - - -	9639	15,506,923 – 15,507,030	-	6	107	88.80	-1.62	0.86	0.668284
5899	3R_DroMel_CAF1	15,507,068 – 15,507,163	- - - - - - - - -	9640	15,507,068 – 15,507,163	-	6	103	80.27	-1.16	0.70	0.514378
5900	3R_DroMel_CAF1	15,513,477 – 15,513,569	- - - - - - - - -	9641	15,513,477 – 15,513,569	+	4	96	76.04	-1.48	0.68	0.543328
5901	3R_DroMel_CAF1	15,515,761 – 15,515,852	- - - - - - - - -	9642	15,515,761 – 15,515,852	-	6	98	71.58	-2.71	0.23	0.923437
5902	3R_DroMel_CAF1	15,519,076 – 15,519,178	- - - - - - - - -	9643	15,519,076 – 15,519,178	-	5	103	97.48	-1.49	0.94	0.927543
5903	3R_DroMel_CAF1	15,538,812 – 15,538,915	- - - - - - - - -	9644	15,538,812 – 15,538,915	+	4	120	84.30	-1.54	0.74	0.597838
5903	3R_DroMel_CAF1	15,538,812 – 15,538,915	- - - - - - - - -	9645	15,538,812 – 15,538,915	-	4	120	84.30	-1.69	0.78	0.721450
5904	3R_DroMel_CAF1	15,539,223 – 15,539,314	- - - - - - - - -	9646	15,539,223 – 15,539,314	-	6	107	83.01	-1.76	0.77	0.684918
5905	3R_DroMel_CAF1	15,540,061 – 15,540,160	- - - - - - - - -	9647	15,540,061 – 15,540,160	-	5	114	87.57	-2.47	0.69	0.825645
5906	3R_DroMel_CAF1	15,541,845 – 15,541,945	- - - - - - - - -	9648	15,541,845 – 15,541,945	+	6	115	75.32	-2.40	0.48	0.964744
5907	3R_DroMel_CAF1	15,545,479 – 15,545,576	- - - - - - - - -	9649	15,545,479 – 15,545,576	+	6	104	78.01	-2.31	0.55	0.925742
5908	3R_DroMel_CAF1	15,550,615 – 15,550,718	- - - - - - - - -	9650	15,550,615 – 15,550,718	-	5	103	89.22	-2.38	0.83	0.990619
5909	3R_DroMel_CAF1	15,553,786 – 15,553,882	- - - - - - - - -	9651	15,553,786 – 15,553,882	+	6	112	76.20	-1.51	0.58	0.587801
5910	3R_DroMel_CAF1	15,555,165 – 15,555,264	- - - - - - - - -	9652	15,555,165 – 15,555,264	+	4	99	83.50	-1.64	0.70	0.626822
5910	3R_DroMel_CAF1	15,555,165 – 15,555,264	- - - - - - - - -	9653	15,555,165 – 15,555,264	-	4	99	83.50	-1.60	0.77	0.644567
5911	3R_DroMel_CAF1	15,558,320 – 15,558,417	- - - - - - - - -	9654	15,558,320 – 15,558,417	+	4	108	90.65	-1.84	0.79	0.768441
5911	3R_DroMel_CAF1	15,558,320 – 15,558,417	- - - - - - - - -	9655	15,558,320 – 15,558,417	-	4	108	90.65	-2.81	0.76	0.911582
5912	3R_DroMel_CAF1	15,558,980 – 15,559,087	- - - - - - - - -	9656	15,558,980 – 15,559,087	-	5	120	79.91	-1.83	0.64	0.743608
5913	3R_DroMel_CAF1	15,565,004 – 15,565,193	- - - - - - - - -	9657	15,565,004 – 15,565,100	-	4	96	80.84	-1.74	0.62	0.555604
5913	3R_DroMel_CAF1	15,565,004 – 15,565,193	- - - - - - - - -	9658	15,565,100 – 15,565,193	-	6	94	81.13	-1.32	0.78	0.637303
5914	3R_DroMel_CAF1	15,567,454 – 15,567,556	- - - - - - - - -	9659	15,567,454 – 15,567,556	+	5	102	93.73	-2.03	0.84	0.979980
5914	3R_DroMel_CAF1	15,567,454 – 15,567,556	- - - - - - - - -	9660	15,567,454 – 15,567,556	-	5	102	93.73	-1.71	0.95	0.994685
5915	3R_DroMel_CAF1	15,567,739 – 15,567,875	- - - - - - - - -	9661	15,567,739 – 15,567,844	+	6	111	88.10	-3.04	0.95	0.999404
				9662	15,567,739 – 15,567,844	-	6	111	88.10	-1.58	0.84	0.522707
				9663	15,567,775 – 15,567,875	+	6	106	85.82	-3.46	0.90	0.995466
				9664	15,567,775 – 15,567,875	-	6	106	85.82	-2.24	0.81	0.779127
5916	3R_DroMel_CAF1	15,569,919 – 15,570,023	- - - - - - - - -	9665	15,569,919 – 15,570,023	-	3	104	73.38	-1.28	0.87	0.987955
5917	3R_DroMel_CAF1	15,579,096 – 15,579,191	- - - - - - - - -	9666	15,579,096 – 15,579,191	+	6	108	80.16	-2.42	0.77	0.944581
5917	3R_DroMel_CAF1	15,579,096 – 15,579,191	- - - - - - - - -	9667	15,579,096 – 15,579,191	-	6	108	80.16	-2.45	0.62	0.912007
5918	3R_DroMel_CAF1	15,589,958 – 15,590,073	- - - "knownCDS=Parent=FBtr0100127, FBtr0083788, FBtr0083787, FBtr0100128;Name=GluClalpha-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7535-RC, FlyBase+Annotation+IDs:CG7535-RB, FlyBase+Annotation+IDs:CG7535-RA, FlyBase+Annotation+IDs:CG7535-RD" - - - - -	9668	15,589,958 – 15,590,073	-	6	120	81.86	-1.58	0.70	0.628701
5919	3R_DroMel_CAF1	15,591,400 – 15,591,500	- - - "knownCDS=Parent=FBtr0100127, FBtr0083788, FBtr0083787, FBtr0100128;Name=GluClalpha-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7535-RC, FlyBase+Annotation+IDs:CG7535-RB, FlyBase+Annotation+IDs:CG7535-RA, FlyBase+Annotation+IDs:CG7535-RD" - - - - -	9669	15,591,400 – 15,591,500	+	6	120	80.87	-1.23	0.85	0.610542
5920	3R_DroMel_CAF1	15,593,946 – 15,594,050	- - - - - - - - -	9670	15,593,946 – 15,594,050	+	6	113	90.03	-2.68	0.95	0.999585
5921	3R_DroMel_CAF1	15,597,315 – 15,597,435	- - - "knownCDS=Parent=FBtr0083798;Name=CG6300-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6300-RA" - - - - -	9671	15,597,315 – 15,597,435	-	5	120	92.42	-1.37	0.82	0.612932
5922	3R_DroMel_CAF1	15,602,271 – 15,602,391	- - - "knownCDS=Parent=FBtr0083797;Name=CG11659-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11659-RA" - - - - -	9672	15,602,271 – 15,602,391	-	4	120	78.06	-1.80	0.67	0.789658
5923	3R_DroMel_CAF1	15,602,585 – 15,602,705	- - - "knownCDS=Parent=FBtr0083797;Name=CG11659-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11659-RA" - - - - -	9673	15,602,585 – 15,602,705	+	4	120	74.86	-1.46	0.68	0.575238
5924	3R_DroMel_CAF1	15,605,448 – 15,605,568	- - - "knownCDS=Parent=FBtr0083789;Name=CG11391-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11391-RA" - - - - -	9674	15,605,448 – 15,605,568	-	6	120	82.33	-2.27	0.56	0.527539
5925	3R_DroMel_CAF1	15,609,516 – 15,609,608	- - - "knownCDS=Parent=FBtr0083791;Name=CG11453-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11453-RA" - - - - -	9675	15,609,516 – 15,609,608	+	6	100	77.32	-1.66	0.60	0.770230
5926	3R_DroMel_CAF1	15,610,136 – 15,610,240	- - - "knownCDS=Parent=FBtr0083791;Name=CG11453-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11453-RA" - - - - -	9676	15,610,136 – 15,610,240	+	6	109	83.27	-2.08	0.84	0.868049
5927	3R_DroMel_CAF1	15,612,729 – 15,612,855	- - - - - - - - -	9677	15,612,729 – 15,612,823	+	4	94	87.06	-3.35	0.69	0.955131
				9678	15,612,729 – 15,612,823	-	4	94	87.06	-2.21	0.68	0.799368
				9679	15,612,749 – 15,612,855	+	6	107	82.84	-2.45	0.61	0.649492
5928	3R_DroMel_CAF1	15,616,675 – 15,616,772	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000245;Name=Dmel_Ala_AGC_14000245;TFAMID=DmelAAGC-15616694" "tRNAscan=type:Ala:anticodon:AGC f:15616693_t:15616783_strand=+_cove=59.84" - - "Rfam=AC009461.5/119709-119637_RF00005;tRNA;\|2e-35" - - - "Flybase=FBgn0011840:transfer_RNA:ala:90C:cytosolic_tRNA_gene\|2e-37"	9680	15,616,675 – 15,616,772	+	6	98	83.56	-1.42	0.93	0.724960
5929	3R_DroMel_CAF1	15,624,780 – 15,624,877	- - - - - - - - -	9681	15,624,780 – 15,624,877	-	6	106	81.62	-2.39	0.66	0.845252
5930	3R_DroMel_CAF1	15,628,401 – 15,628,502	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000246;Name=Dmel_Thr_AGT_14000246;TFAMID=DmelTAGT-15628412" "tRNAscan=type:Thr:anticodon:AGT f:15628411_t:15628494_strand=+_cove=75.61" - - "Rfam=AE003713.3/89788-89861_RF00005;tRNA;\|5e-36" - - - "Flybase=FBgn0011993:transfer_RNA:thr:90Ca:cytosolic_tRNA_gene\|6e-38"	9682	15,628,401 – 15,628,502	-	6	120	78.17	-1.39	0.85	0.867988
5931	3R_DroMel_CAF1	15,629,396 – 15,629,487	- - - - - - - - -	9683	15,629,396 – 15,629,487	+	6	102	91.85	-1.75	0.89	0.926202
5932	3R_DroMel_CAF1	15,631,789 – 15,631,879	- - - - - - - - -	9684	15,631,789 – 15,631,879	-	5	90	86.84	-1.52	0.76	0.531129
5933	3R_DroMel_CAF1	15,633,599 – 15,633,736	- - - - - - - - -	9685	15,633,599 – 15,633,715	+	6	117	82.70	-1.98	0.63	0.556031
5933	3R_DroMel_CAF1	15,633,599 – 15,633,736	- - - - - - - - -	9686	15,633,638 – 15,633,736	+	6	101	79.66	-2.94	0.73	0.968473
5934	3R_DroMel_CAF1	15,637,919 – 15,638,019	- - - - - - - - -	9687	15,637,919 – 15,638,019	+	6	112	82.33	-1.63	0.73	0.646897
5935	3R_DroMel_CAF1	15,642,236 – 15,642,341	- - - - - - - - -	9688	15,642,236 – 15,642,341	+	3	105	84.98	-1.42	0.87	0.611049
5936	3R_DroMel_CAF1	15,645,063 – 15,645,167	- - - - - - - - -	9689	15,645,063 – 15,645,167	-	5	104	86.80	-1.59	0.79	0.637363
5937	3R_DroMel_CAF1	15,645,603 – 15,645,700	- - - - - - - - -	9690	15,645,603 – 15,645,700	+	5	97	86.46	-2.53	0.82	0.989559
5938	3R_DroMel_CAF1	15,652,935 – 15,653,076	- - - - - - - - -	9691	15,652,935 – 15,653,040	+	4	106	88.10	-1.37	0.83	0.521228
				9692	15,652,965 – 15,653,076	+	3	112	87.13	-1.87	0.83	0.655109
				9693	15,652,965 – 15,653,076	-	3	112	87.13	-2.40	0.72	0.714542
5939	3R_DroMel_CAF1	15,655,210 – 15,655,303	- - - - - - - - -	9694	15,655,210 – 15,655,303	-	6	104	75.95	-1.84	0.49	0.620040
5940	3R_DroMel_CAF1	15,658,136 – 15,658,235	- - - - - - - - -	9695	15,658,136 – 15,658,235	+	6	108	75.18	-2.60	0.42	0.971677
5940	3R_DroMel_CAF1	15,658,136 – 15,658,235	- - - - - - - - -	9696	15,658,136 – 15,658,235	-	6	108	75.18	-2.45	0.40	0.929334
5941	3R_DroMel_CAF1	15,659,185 – 15,659,284	- - - - - - - - -	9697	15,659,185 – 15,659,284	-	6	103	82.78	-1.79	0.69	0.609939
5942	3R_DroMel_CAF1	15,664,067 – 15,664,178	- - - - - - - - -	9698	15,664,067 – 15,664,178	+	3	111	82.28	-1.85	0.73	0.730058
5943	3R_DroMel_CAF1	15,665,503 – 15,665,600	- - - - - - - - -	9699	15,665,503 – 15,665,600	-	6	115	88.80	-2.14	0.79	0.545780
5944	3R_DroMel_CAF1	15,667,108 – 15,667,204	- - - "knownCDS=Parent=FBtr0083812;Name=CG31459-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31459-RA" - - - - -	9700	15,667,108 – 15,667,204	+	6	96	85.76	-1.93	0.86	0.834791
5944	3R_DroMel_CAF1	15,667,108 – 15,667,204		9701	15,667,108 – 15,667,204	-	6	96	85.76	-1.92	0.82	0.703788
5945	3R_DroMel_CAF1	15,673,279 – 15,673,387	- - - "knownCDS=Parent=FBtr0083813, FBtr0083814;Name=CG4662-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4662-RA, FlyBase+Annotation+IDs:CG4662-RB" - - - - -	9702	15,673,279 – 15,673,387	+	6	112	80.79	-1.59	0.65	0.627575
5946	3R_DroMel_CAF1	15,686,974 – 15,687,070	- - - - - - - - -	9703	15,686,974 – 15,687,070	+	6	104	79.73	-1.39	0.62	0.500000
5947	3R_DroMel_CAF1	15,688,155 – 15,688,255	- - - - - - - - -	9704	15,688,155 – 15,688,255	-	3	107	81.93	-1.31	0.82	0.531495
5948	3R_DroMel_CAF1	15,689,805 – 15,689,910	- - - "knownCDS=Parent=FBtr0083861;Name=CG4572-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4572-RB" - - - - -	9705	15,689,805 – 15,689,910	+	6	112	82.05	-1.44	0.67	0.500000
5949	3R_DroMel_CAF1	15,696,662 – 15,696,754	- - - - - - - - -	9706	15,696,662 – 15,696,754	-	6	109	79.10	-1.04	0.71	0.517708
5950	3R_DroMel_CAF1	15,698,637 – 15,698,745	- - - - - - - - -	9707	15,698,637 – 15,698,745	+	5	113	79.96	-1.92	0.58	0.693125
5951	3R_DroMel_CAF1	15,699,144 – 15,699,236	- - - - - - - - -	9708	15,699,144 – 15,699,236	-	5	94	94.40	-1.61	0.87	0.938957
5952	3R_DroMel_CAF1	15,699,546 – 15,699,636	- - - - - - - - -	9709	15,699,546 – 15,699,636	+	5	90	83.28	-1.73	0.75	0.707442
5952	3R_DroMel_CAF1	15,699,546 – 15,699,636	- - - - - - - - -	9710	15,699,546 – 15,699,636	-	5	90	83.28	-1.88	0.79	0.838245
5953	3R_DroMel_CAF1	15,708,798 – 15,708,918	- - "RNAmicro=f:15708798_t:15708917_strand:-_p:0.668122" "knownCDS=Parent=FBtr0083818;Name=Pk92B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4720-RA" - - - - -	9711	15,708,798 – 15,708,918	+	6	120	85.17	-2.22	0.73	0.548718
5953	3R_DroMel_CAF1	15,708,798 – 15,708,918		9712	15,708,798 – 15,708,918	-	6	120	85.17	-3.13	0.78	0.903949
5954	3R_DroMel_CAF1	15,711,570 – 15,711,660	- - - - - - - - -	9713	15,711,570 – 15,711,660	+	5	90	91.44	-1.52	0.93	0.957219
5954	3R_DroMel_CAF1	15,711,570 – 15,711,660	- - - - - - - - -	9714	15,711,570 – 15,711,660	-	5	90	91.44	-2.08	0.87	0.993059
5955	3R_DroMel_CAF1	15,713,610 – 15,713,703	- - - "knownCDS=Parent=FBtr0083857;Name=ninaE-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4550-RA" - - - - -	9715	15,713,610 – 15,713,703	+	6	106	76.28	-1.10	0.69	0.638132
5956	3R_DroMel_CAF1	15,716,113 – 15,716,334	- - - - - - - - -	9716	15,716,113 – 15,716,228	-	4	117	64.68	-1.66	0.54	0.933380
5956	3R_DroMel_CAF1	15,716,113 – 15,716,334	- - - - - - - - -	9717	15,716,228 – 15,716,334	-	5	108	79.42	-1.97	0.52	0.660931
5957	3R_DroMel_CAF1	15,716,982 – 15,717,078	- - - - - - - - -	9718	15,716,982 – 15,717,078	-	6	103	72.12	-2.54	0.27	0.910216
5958	3R_DroMel_CAF1	15,724,045 – 15,724,158	- - - "knownCDS=Parent=FBtr0083820;Name=CG4733-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4733-RA" - - - - -	9719	15,724,045 – 15,724,158	-	6	117	77.38	-0.97	0.75	0.635658
5959	3R_DroMel_CAF1	15,730,762 – 15,730,958	- - - - - - - - -	9720	15,730,762 – 15,730,882	+	4	120	82.50	-2.67	0.70	0.983776
				9721	15,730,802 – 15,730,921	+	4	119	89.22	-1.94	0.87	0.920020
				9722	15,730,842 – 15,730,958	-	4	116	93.68	-2.37	0.90	0.972728
5960	3R_DroMel_CAF1	15,736,175 – 15,736,269	- - - - - - - - -	9723	15,736,175 – 15,736,269	-	3	94	77.14	-2.61	0.50	0.638937
5961	3R_DroMel_CAF1	15,737,721 – 15,737,829	- - - - - - - - -	9724	15,737,721 – 15,737,829	+	5	108	90.19	-1.73	0.76	0.694144
5962	3R_DroMel_CAF1	15,739,291 – 15,739,412	- - - - - - - - -	9725	15,739,291 – 15,739,382	+	6	99	75.64	-1.81	0.47	0.508446
5962	3R_DroMel_CAF1	15,739,291 – 15,739,412	- - - - - - - - -	9726	15,739,316 – 15,739,412	+	6	96	83.26	-2.17	0.78	0.800089
5963	3R_DroMel_CAF1	15,739,447 – 15,739,538	- - - - - - - - -	9727	15,739,447 – 15,739,538	+	3	91	84.01	-2.20	0.67	0.707635
5963	3R_DroMel_CAF1	15,739,447 – 15,739,538	- - - - - - - - -	9728	15,739,447 – 15,739,538	-	3	91	84.01	-1.30	0.92	0.805717
5964	3R_DroMel_CAF1	15,742,258 – 15,742,370	- - - "knownCDS=Parent=FBtr0083851;Name=CG4465-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4465-RA" - - - - -	9729	15,742,258 – 15,742,370	+	6	118	74.80	-2.02	0.46	0.801941
5964	3R_DroMel_CAF1	15,742,258 – 15,742,370		9730	15,742,258 – 15,742,370	-	6	118	74.80	-2.25	0.47	0.940439
5965	3R_DroMel_CAF1	15,743,282 – 15,743,394	- - - "knownCDS=Parent=FBtr0083851;Name=CG4465-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4465-RA" - - - - -	9731	15,743,282 – 15,743,394	-	6	112	72.14	-1.96	0.48	0.899267
5966	3R_DroMel_CAF1	15,746,443 – 15,746,561	- - "RNAmicro=f:15746443_t:15746562_strand:-_p:0.999804" - - - - - -	9732	15,746,443 – 15,746,561	+	5	120	87.46	-6.37	0.86	0.995898
5966	3R_DroMel_CAF1	15,746,443 – 15,746,561		9733	15,746,443 – 15,746,561	-	5	120	87.46	-8.24	0.94	0.910195
5967	3R_DroMel_CAF1	15,752,122 – 15,752,218	- - - - - - - - -	9734	15,752,122 – 15,752,218	-	6	101	79.04	-1.81	0.60	0.745039
5968	3R_DroMel_CAF1	15,758,882 – 15,759,162	- - - "knownCDS=Parent=FBtr0083848;Name=mira-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12249-RB" - - - - -	9735	15,758,882 – 15,759,002	+	5	120	96.50	-1.68	0.92	0.977860
				9736	15,758,882 – 15,759,002	-	5	120	96.50	-1.37	0.91	0.835996
				9737	15,758,922 – 15,759,042	+	5	120	95.83	-1.68	0.92	0.981373
				9738	15,759,002 – 15,759,122	+	5	120	97.42	-1.58	0.93	0.954212
				9739	15,759,002 – 15,759,122	-	5	120	97.42	-1.21	0.91	0.516783
				9740	15,759,042 – 15,759,162	+	4	120	97.50	-1.86	0.98	0.822286
5969	3R_DroMel_CAF1	15,759,282 – 15,759,402	- - - "knownCDS=Parent=FBtr0083848;Name=mira-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12249-RB" - - - - -	9741	15,759,282 – 15,759,402	-	5	120	91.42	-1.65	0.83	0.885675
5970	3R_DroMel_CAF1	15,759,998 – 15,760,337	- - - "knownCDS=Parent=FBtr0083848;Name=mira-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12249-RB" - - - - -	9742	15,759,998 – 15,760,118	+	4	120	95.69	-1.91	0.90	0.829302
				9743	15,759,998 – 15,760,118	-	4	120	95.69	-1.92	0.92	0.879969
				9744	15,760,118 – 15,760,238	-	5	120	94.00	-1.19	0.87	0.521812
				9745	15,760,238 – 15,760,337	+	5	120	78.40	-2.28	0.69	0.979069
5971	3R_DroMel_CAF1	15,762,544 – 15,762,903	- - - - - - - - -	9746	15,762,544 – 15,762,656	-	5	120	74.48	-2.04	0.38	0.903164
				9747	15,762,580 – 15,762,693	-	5	120	76.17	-2.11	0.43	0.899249
				9748	15,762,656 – 15,762,757	-	4	107	87.98	-1.49	0.74	0.562442
				9749	15,762,757 – 15,762,863	+	5	120	69.10	-2.11	0.40	0.953141
				9750	15,762,796 – 15,762,903	+	5	120	75.31	-1.90	0.61	0.909361
5972	3R_DroMel_CAF1	15,762,973 – 15,763,093	- - - "knownCDS=Parent=FBtr0083846;Name=Hs6st-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4451-RA" - - - - -	9751	15,762,973 – 15,763,093	+	5	120	90.08	-1.55	0.78	0.617996
5973	3R_DroMel_CAF1	15,763,435 – 15,763,555	- - - "knownCDS=Parent=FBtr0083846;Name=Hs6st-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4451-RA" - - - - -	9752	15,763,435 – 15,763,555	+	5	120	93.42	-1.57	0.92	0.972863
5973	3R_DroMel_CAF1	15,763,435 – 15,763,555		9753	15,763,435 – 15,763,555	-	5	120	93.42	-1.30	0.87	0.707119
5974	3R_DroMel_CAF1	15,764,661 – 15,764,774	- - - - - - - - -	9754	15,764,661 – 15,764,774	-	5	120	82.32	-2.03	0.58	0.645296
5975	3R_DroMel_CAF1	15,765,365 – 15,765,474	- - - - - - - - -	9755	15,765,365 – 15,765,474	+	5	120	87.50	-1.88	0.69	0.586432
5975	3R_DroMel_CAF1	15,765,365 – 15,765,474	- - - - - - - - -	9756	15,765,365 – 15,765,474	-	5	120	87.50	-1.68	0.79	0.737714
5976	3R_DroMel_CAF1	15,766,339 – 15,766,574	- - - - - - - - -	9757	15,766,339 – 15,766,437	-	3	98	97.28	-4.31	0.97	0.984386
				9758	15,766,437 – 15,766,534	+	4	97	92.50	-3.02	0.78	0.911724
				9759	15,766,437 – 15,766,534	-	4	97	92.50	-2.27	0.75	0.694729
				9760	15,766,474 – 15,766,574	+	4	100	89.63	-1.69	0.71	0.568031
				9761	15,766,474 – 15,766,574	-	4	100	89.63	-1.76	0.79	0.745056
5977	3R_DroMel_CAF1	15,768,043 – 15,768,137	- - - - - - - - -	9762	15,768,043 – 15,768,137	+	4	120	82.64	-1.78	0.74	0.766493
5978	3R_DroMel_CAF1	15,768,488 – 15,768,608	- - - - - - - - -	9763	15,768,488 – 15,768,608	-	4	120	85.28	-1.54	0.71	0.585696
5979	3R_DroMel_CAF1	15,768,681 – 15,768,839	- - - - - - - - -	9764	15,768,681 – 15,768,799	+	4	120	88.34	-1.67	0.88	0.814560
				9765	15,768,720 – 15,768,839	+	4	120	91.99	-2.93	0.99	0.998616
				9766	15,768,720 – 15,768,839	-	4	120	91.99	-2.17	0.85	0.932207
5980	3R_DroMel_CAF1	15,768,919 – 15,769,039	- - - - - - - - -	9767	15,768,919 – 15,769,039	+	4	120	89.72	-1.54	0.77	0.584319
5981	3R_DroMel_CAF1	15,769,273 – 15,769,410	- - - - - - - - -	9768	15,769,273 – 15,769,370	-	4	120	81.13	-1.66	0.66	0.583653
5981	3R_DroMel_CAF1	15,769,273 – 15,769,410	- - - - - - - - -	9769	15,769,301 – 15,769,410	-	3	120	91.09	-1.51	0.99	0.837284
5982	3R_DroMel_CAF1	15,769,450 – 15,769,570	- - - - - - - - -	9770	15,769,450 – 15,769,570	-	4	120	87.64	-2.32	0.73	0.890882
5983	3R_DroMel_CAF1	15,769,800 – 15,769,920	- - - - - - - - -	9771	15,769,800 – 15,769,920	-	4	120	89.86	-1.64	0.86	0.770216
5984	3R_DroMel_CAF1	15,770,539 – 15,770,659	- - - - - - - - -	9772	15,770,539 – 15,770,659	-	4	120	96.67	-2.51	0.93	0.960196
5985	3R_DroMel_CAF1	15,772,333 – 15,772,453	- - - - - - - - -	9773	15,772,333 – 15,772,453	+	3	120	95.56	-2.24	0.97	0.948760
5985	3R_DroMel_CAF1	15,772,333 – 15,772,453	- - - - - - - - -	9774	15,772,333 – 15,772,453	-	3	120	95.56	-2.11	0.89	0.754450
5986	3R_DroMel_CAF1	15,773,151 – 15,773,311	- - - - - - - - -	9775	15,773,151 – 15,773,271	+	3	120	96.11	-2.00	0.96	0.865927
				9776	15,773,151 – 15,773,271	-	3	120	96.11	-1.51	0.98	0.636989
				9777	15,773,191 – 15,773,311	+	3	120	94.44	-1.76	0.95	0.757762
5987	3R_DroMel_CAF1	15,775,538 – 15,775,640	- - - - - - - - -	9778	15,775,538 – 15,775,640	+	4	108	73.11	-2.89	0.32	0.500000
5988	3R_DroMel_CAF1	15,776,960 – 15,777,110	- - - - - - - - -	9779	15,776,960 – 15,777,070	+	5	110	91.64	-3.12	0.85	0.999527
				9780	15,776,960 – 15,777,070	-	5	110	91.64	-1.51	0.86	0.855887
				9781	15,776,999 – 15,777,110	+	5	111	88.02	-1.64	0.71	0.500000
5989	3R_DroMel_CAF1	15,778,252 – 15,778,361	- - - - - - - - -	9782	15,778,252 – 15,778,361	-	5	120	83.58	-2.16	0.61	0.717731
5990	3R_DroMel_CAF1	15,778,466 – 15,778,579	- - - - - - - - -	9783	15,778,466 – 15,778,579	-	5	118	84.09	-1.95	0.76	0.831653
5991	3R_DroMel_CAF1	15,778,705 – 15,778,808	- - - - - - - - -	9784	15,778,705 – 15,778,808	-	6	107	82.78	-1.82	0.66	0.554331
5992	3R_DroMel_CAF1	15,781,381 – 15,781,483	- - - - - - - - -	9785	15,781,381 – 15,781,483	+	6	104	79.85	-2.15	0.50	0.607140
5993	3R_DroMel_CAF1	15,783,772 – 15,783,877	- - - - - - - - -	9786	15,783,772 – 15,783,877	+	5	115	87.65	-1.85	0.70	0.604747
5994	3R_DroMel_CAF1	15,785,237 – 15,785,334	- - - - - - - - -	9787	15,785,237 – 15,785,334	-	6	97	88.75	-1.74	0.93	0.957875
5995	3R_DroMel_CAF1	15,786,065 – 15,786,170	- - - - - - - - -	9788	15,786,065 – 15,786,170	-	6	106	90.56	-1.91	0.84	0.728374
5996	3R_DroMel_CAF1	15,786,244 – 15,786,363	- - - - - - - - -	9789	15,786,244 – 15,786,363	-	5	120	92.56	-1.47	0.79	0.572504
5997	3R_DroMel_CAF1	15,787,001 – 15,787,102	- - - - - - - - -	9790	15,787,001 – 15,787,102	+	6	113	80.82	-1.79	0.64	0.702652
5998	3R_DroMel_CAF1	15,787,898 – 15,788,067	- - - - - - - - -	9791	15,787,898 – 15,788,001	-	5	106	94.29	-1.58	0.79	0.594341
				9792	15,787,937 – 15,788,041	-	5	107	93.59	-1.21	0.88	0.622851
				9793	15,787,973 – 15,788,067	-	5	94	93.62	-1.56	0.86	0.891735
5999	3R_DroMel_CAF1	15,791,263 – 15,791,383	- - - - - - - - -	9794	15,791,263 – 15,791,383	-	5	120	85.17	-1.72	0.80	0.739952
6000	3R_DroMel_CAF1	15,791,873 – 15,791,970	- - - - - - - - -	9795	15,791,873 – 15,791,970	+	5	97	95.57	-2.43	0.93	0.999732
6001	3R_DroMel_CAF1	15,792,804 – 15,792,907	- - - - - - - - -	9796	15,792,804 – 15,792,907	+	5	103	86.47	-2.73	0.77	0.985607
6002	3R_DroMel_CAF1	15,795,186 – 15,795,325	- - - - - - - - -	9797	15,795,186 – 15,795,295	-	6	109	93.15	-2.30	0.80	0.624732
6002	3R_DroMel_CAF1	15,795,186 – 15,795,325	- - - - - - - - -	9798	15,795,226 – 15,795,325	-	6	107	90.43	-3.03	0.81	0.923514
6003	3R_DroMel_CAF1	15,795,969 – 15,796,067	- - - - - - - - -	9799	15,795,969 – 15,796,067	+	5	98	84.59	-2.02	0.71	0.793067
6004	3R_DroMel_CAF1	15,797,729 – 15,797,823	- - - - - - - - -	9800	15,797,729 – 15,797,823	+	6	96	91.62	-1.16	0.98	0.918597
6005	3R_DroMel_CAF1	15,800,016 – 15,800,176	- - - "knownCDS=Parent=FBtr0083824;Name=CG31213-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31213-RA" - - - - -	9801	15,800,016 – 15,800,136	-	4	120	89.03	-2.20	0.78	0.895293
6005	3R_DroMel_CAF1	15,800,016 – 15,800,176		9802	15,800,056 – 15,800,176	-	4	120	83.19	-1.97	0.72	0.850585
6006	3R_DroMel_CAF1	15,805,742 – 15,805,834	- - - - - - - - -	9803	15,805,742 – 15,805,834	+	6	118	74.71	-2.09	0.73	0.986420
6007	3R_DroMel_CAF1	15,806,892 – 15,807,030	- - - - - - - - -	9804	15,806,892 – 15,806,999	+	4	110	91.81	-1.21	0.97	0.524981
				9805	15,806,892 – 15,806,999	-	4	110	91.81	-1.83	0.87	0.871526
				9806	15,806,925 – 15,807,030	-	4	108	84.23	-1.68	0.80	0.725610
6008	3R_DroMel_CAF1	15,816,771 – 15,816,882	- - - - - - - - -	9807	15,816,771 – 15,816,882	-	3	115	89.44	-2.08	0.77	0.535679
6009	3R_DroMel_CAF1	15,821,175 – 15,821,279	- - - - - - - - -	9808	15,821,175 – 15,821,279	-	3	113	74.69	-2.20	0.57	0.956203
6010	3R_DroMel_CAF1	15,834,294 – 15,834,385	- - - - - - - - -	9809	15,834,294 – 15,834,385	+	3	91	84.25	-1.83	0.75	0.614063
6011	3R_DroMel_CAF1	15,834,894 – 15,835,014	- - - "knownCDS=Parent=FBtr0083825;Name=MED25-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12254-RA" - - - - -	9810	15,834,894 – 15,835,014	+	3	120	92.22	-1.99	0.93	0.846205
6011	3R_DroMel_CAF1	15,834,894 – 15,835,014		9811	15,834,894 – 15,835,014	-	3	120	92.22	-2.58	0.98	0.989540
6012	3R_DroMel_CAF1	15,836,435 – 15,836,595	- - - "knownCDS=Parent=FBtr0083825;Name=MED25-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12254-RA" - - - - -	9812	15,836,435 – 15,836,555	+	3	120	95.00	-2.53	0.92	0.941475
6012	3R_DroMel_CAF1	15,836,435 – 15,836,595		9813	15,836,475 – 15,836,595	+	3	120	95.56	-1.73	0.96	0.739996
6013	3R_DroMel_CAF1	15,837,275 – 15,837,395	- - - "knownCDS=Parent=FBtr0083825;Name=MED25-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12254-RA" - - - - -	9814	15,837,275 – 15,837,395	+	3	120	94.17	-1.33	1.00	0.588414
6014	3R_DroMel_CAF1	15,838,085 – 15,838,200	- - - "knownCDS=Parent=FBtr0083845;Name=CG17190-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17190-RA" - - - - -	9815	15,838,085 – 15,838,200	-	6	115	79.07	-2.31	0.61	0.927979
6015	3R_DroMel_CAF1	15,841,413 – 15,841,519	- - - - - - - - -	9816	15,841,413 – 15,841,519	-	6	109	79.65	-2.00	0.55	0.668783
6016	3R_DroMel_CAF1	15,842,776 – 15,842,892	- - - "knownCDS=Parent=FBtr0083827;Name=CG4836-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4836-RB" - - - - -	9817	15,842,776 – 15,842,892	-	6	116	81.03	-1.86	0.61	0.641422
6017	3R_DroMel_CAF1	15,843,172 – 15,843,292	- - - - - - - - -	9818	15,843,172 – 15,843,292	+	6	120	71.56	-1.81	0.43	0.698414
6018	3R_DroMel_CAF1	15,846,358 – 15,846,459	- - - "knownCDS=Parent=FBtr0083843;Name=CG4433-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4433-RB" - - - - -	9819	15,846,358 – 15,846,459	-	6	106	76.51	-1.06	0.67	0.516141
6019	3R_DroMel_CAF1	15,850,049 – 15,850,202	- - - - - - - - -	9820	15,850,049 – 15,850,162	+	6	114	72.68	-1.60	0.49	0.528558
6019	3R_DroMel_CAF1	15,850,049 – 15,850,202	- - - - - - - - -	9821	15,850,082 – 15,850,202	-	6	120	76.25	-2.28	0.54	0.955908
6020	3R_DroMel_CAF1	15,851,587 – 15,851,689	- - - - - - - - -	9822	15,851,587 – 15,851,689	+	6	113	73.72	-1.59	0.53	0.608031
6021	3R_DroMel_CAF1	15,856,538 – 15,856,652	- - - "knownCDS=Parent=FBtr0083840;Name=CG4413-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4413-RA" - - - - -	9823	15,856,538 – 15,856,652	+	6	114	77.49	-1.42	0.68	0.801180
6022	3R_DroMel_CAF1	15,866,575 – 15,866,668	- - - - - - - - -	9824	15,866,575 – 15,866,668	+	6	104	77.79	-2.83	0.36	0.868193
6023	3R_DroMel_CAF1	15,869,377 – 15,869,494	- - - "knownCDS=Parent=FBtr0091937, FBtr0091938;Name=Indy-2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33933-RA, FlyBase+Annotation+IDs:CG33933-RB" - - - - -	9825	15,869,377 – 15,869,494	-	6	120	75.65	-1.66	0.79	0.965414
6024	3R_DroMel_CAF1	15,881,424 – 15,881,558	- - - - - - - - -	9826	15,881,424 – 15,881,519	+	3	112	80.95	-1.80	0.76	0.802201
				9827	15,881,424 – 15,881,519	-	3	112	80.95	-1.75	0.77	0.781240
				9828	15,881,455 – 15,881,558	-	3	120	82.22	-1.99	0.69	0.760422
6025	3R_DroMel_CAF1	15,889,904 – 15,890,040	- - - - - - - - -	9829	15,889,904 – 15,890,023	+	6	120	86.94	-2.68	0.91	0.991855
6025	3R_DroMel_CAF1	15,889,904 – 15,890,040	- - - - - - - - -	9830	15,889,944 – 15,890,040	+	6	120	81.10	-1.96	0.68	0.803136
6026	3R_DroMel_CAF1	15,890,087 – 15,890,184	- - - - - - - - -	9831	15,890,087 – 15,890,184	-	5	97	95.44	-1.21	0.88	0.570746
6027	3R_DroMel_CAF1	15,893,742 – 15,893,890	- - - - - - - - -	9832	15,893,742 – 15,893,861	+	6	120	78.42	-2.20	0.43	0.507619
6027	3R_DroMel_CAF1	15,893,742 – 15,893,890	- - - - - - - - -	9833	15,893,782 – 15,893,890	-	6	120	79.26	-2.40	0.44	0.643816
6028	3R_DroMel_CAF1	15,894,599 – 15,894,702	- - - - - - - - -	9834	15,894,599 – 15,894,702	+	5	103	97.07	-2.19	0.96	0.999366
6029	3R_DroMel_CAF1	15,895,046 – 15,895,151	- - - - - - - - -	9835	15,895,046 – 15,895,151	-	3	105	93.02	-2.68	0.72	0.500000
6030	3R_DroMel_CAF1	15,895,539 – 15,895,645	- - - - - - - - -	9836	15,895,539 – 15,895,645	-	3	113	68.03	-2.17	0.63	0.999798
6031	3R_DroMel_CAF1	15,898,462 – 15,898,618	- - - - - - - - -	9837	15,898,462 – 15,898,568	-	5	106	86.37	-2.54	0.76	0.968673
6031	3R_DroMel_CAF1	15,898,462 – 15,898,618	- - - - - - - - -	9838	15,898,528 – 15,898,618	-	6	104	81.33	-1.42	0.65	0.516998
6032	3R_DroMel_CAF1	15,900,519 – 15,900,668	- - - - - - - - -	9839	15,900,519 – 15,900,614	+	5	98	91.04	-1.29	0.82	0.506542
				9840	15,900,578 – 15,900,668	+	5	97	85.01	-2.20	0.58	0.509249
				9841	15,900,578 – 15,900,668	-	5	97	85.01	-2.14	0.65	0.721235
6033	3R_DroMel_CAF1	15,900,912 – 15,901,002	- - - - - - - - -	9842	15,900,912 – 15,901,002	+	6	90	98.52	-0.96	0.98	0.873358
6033	3R_DroMel_CAF1	15,900,912 – 15,901,002	- - - - - - - - -	9843	15,900,912 – 15,901,002	-	6	90	98.52	-1.80	0.96	0.997192
6034	3R_DroMel_CAF1	15,901,036 – 15,901,131	- - - - - - - - -	9844	15,901,036 – 15,901,131	+	5	116	81.69	-2.63	0.65	0.971934
6035	3R_DroMel_CAF1	15,902,216 – 15,902,333	- - - - - - - - -	9845	15,902,216 – 15,902,307	-	6	97	90.32	-1.50	0.85	0.541038
6035	3R_DroMel_CAF1	15,902,216 – 15,902,333	- - - - - - - - -	9846	15,902,242 – 15,902,333	-	6	120	80.75	-1.23	0.69	0.517222
6036	3R_DroMel_CAF1	15,903,302 – 15,903,402	- - - - - - - - -	9847	15,903,302 – 15,903,402	+	6	116	81.54	-1.23	0.71	0.500000
6037	3R_DroMel_CAF1	15,903,424 – 15,903,538	- - - - - - - - -	9848	15,903,424 – 15,903,538	-	6	120	94.12	-2.76	0.86	0.989671
6038	3R_DroMel_CAF1	15,904,192 – 15,904,282	- - - - - - - - -	9849	15,904,192 – 15,904,282	+	6	120	82.28	-1.86	0.63	0.575000
6039	3R_DroMel_CAF1	15,904,735 – 15,904,831	- - - - - - - - -	9850	15,904,735 – 15,904,831	-	6	103	82.06	-2.00	0.67	0.727557
6040	3R_DroMel_CAF1	15,906,979 – 15,907,098	- - - "knownCDS=Parent=FBtr0083876;Name=Rh3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10888-RA" - - - - -	9851	15,906,979 – 15,907,098	+	6	120	90.89	-1.51	0.91	0.889816
6041	3R_DroMel_CAF1	15,909,115 – 15,909,301	- - - - - - - - -	9852	15,909,115 – 15,909,223	-	6	112	71.89	-2.15	0.33	0.771503
				9853	15,909,154 – 15,909,261	+	5	107	79.19	-1.79	0.61	0.663738
				9854	15,909,154 – 15,909,261	-	5	107	79.19	-1.48	0.79	0.726596
				9855	15,909,187 – 15,909,301	+	5	120	80.94	-3.19	0.63	0.996127
				9856	15,909,187 – 15,909,301	-	5	120	80.94	-2.78	0.86	0.996062
6042	3R_DroMel_CAF1	15,910,257 – 15,910,354	- - - - - - - - -	9857	15,910,257 – 15,910,354	+	6	107	80.99	-2.40	0.49	0.590962
6042	3R_DroMel_CAF1	15,910,257 – 15,910,354	- - - - - - - - -	9858	15,910,257 – 15,910,354	-	6	107	80.99	-2.97	0.47	0.809194
6043	3R_DroMel_CAF1	15,912,130 – 15,912,240	- - - - - - - - -	9859	15,912,130 – 15,912,240	-	5	110	98.91	-2.18	0.96	0.997146
6044	3R_DroMel_CAF1	15,912,627 – 15,912,720	- - - - - - - - -	9860	15,912,627 – 15,912,720	+	6	120	81.44	-1.99	0.68	0.793091
6045	3R_DroMel_CAF1	15,913,631 – 15,913,721	- - - - - - - - -	9861	15,913,631 – 15,913,721	-	4	96	94.15	-1.67	0.97	0.876138
6046	3R_DroMel_CAF1	15,915,254 – 15,915,433	- - - - - - - - -	9862	15,915,254 – 15,915,353	+	6	120	80.79	-2.69	0.51	0.812964
6046	3R_DroMel_CAF1	15,915,254 – 15,915,433	- - - - - - - - -	9863	15,915,333 – 15,915,433	+	6	120	82.18	-1.86	0.61	0.530267
6047	3R_DroMel_CAF1	15,915,953 – 15,916,066	- - - - - - - - -	9864	15,915,953 – 15,916,066	+	5	113	75.20	-1.81	0.30	0.698726
6048	3R_DroMel_CAF1	15,918,005 – 15,918,188	- - - - - - - - -	9865	15,918,005 – 15,918,125	-	6	120	92.59	-1.89	0.85	0.832467
6048	3R_DroMel_CAF1	15,918,005 – 15,918,188	- - - - - - - - -	9866	15,918,085 – 15,918,188	-	6	120	81.43	-1.49	0.73	0.662513
6049	3R_DroMel_CAF1	15,918,225 – 15,918,416	- - - - - - - - -	9867	15,918,225 – 15,918,339	+	5	114	96.49	-2.59	0.92	0.999731
				9868	15,918,225 – 15,918,339	-	5	114	96.49	-1.25	0.89	0.611863
				9869	15,918,263 – 15,918,377	+	5	114	92.98	-3.43	0.90	0.999961
				9870	15,918,263 – 15,918,377	-	5	114	92.98	-3.78	0.92	0.999982
				9871	15,918,299 – 15,918,416	+	5	117	93.16	-2.56	0.89	0.999611
6050	3R_DroMel_CAF1	15,919,454 – 15,919,571	- - - - - - - - -	9872	15,919,454 – 15,919,571	-	5	117	95.38	-1.91	0.89	0.992105
6051	3R_DroMel_CAF1	15,919,782 – 15,919,882	- - - - - - - - -	9873	15,919,782 – 15,919,882	-	5	107	93.58	-1.50	0.80	0.596921
6052	3R_DroMel_CAF1	15,921,464 – 15,921,555	- - - - - - - - -	9874	15,921,464 – 15,921,555	-	5	91	86.81	-1.77	0.73	0.652114
6053	3R_DroMel_CAF1	15,921,744 – 15,921,857	- - - - - - - - -	9875	15,921,744 – 15,921,857	+	6	120	88.84	-2.69	0.88	0.986088
6054	3R_DroMel_CAF1	15,922,375 – 15,922,489	- - - - - - - - -	9876	15,922,375 – 15,922,489	+	5	115	84.53	-1.75	0.68	0.580818
6054	3R_DroMel_CAF1	15,922,375 – 15,922,489	- - - - - - - - -	9877	15,922,375 – 15,922,489	-	5	115	84.53	-2.41	0.73	0.938166
6055	3R_DroMel_CAF1	15,922,929 – 15,923,045	- - - - - - - - -	9878	15,922,929 – 15,923,045	+	6	120	96.16	-1.14	0.91	0.666726
6056	3R_DroMel_CAF1	15,925,943 – 15,926,051	- - - - - - - - -	9879	15,925,943 – 15,926,051	+	6	110	96.32	-1.56	0.88	0.853362
6056	3R_DroMel_CAF1	15,925,943 – 15,926,051	- - - - - - - - -	9880	15,925,943 – 15,926,051	-	6	110	96.32	-1.95	0.91	0.990874
6057	3R_DroMel_CAF1	15,926,125 – 15,926,218	- - - - - - - - -	9881	15,926,125 – 15,926,218	-	5	94	93.53	-1.23	0.86	0.558945
6058	3R_DroMel_CAF1	15,926,383 – 15,926,474	- - - - - - - - -	9882	15,926,383 – 15,926,474	-	6	98	91.07	-1.92	0.81	0.514031
6059	3R_DroMel_CAF1	15,928,469 – 15,928,575	- - - - - - - - -	9883	15,928,469 – 15,928,575	-	6	120	77.58	-2.10	0.43	0.525589
6060	3R_DroMel_CAF1	15,928,654 – 15,928,772	- - - - - - - - -	9884	15,928,654 – 15,928,772	+	6	118	96.33	-1.23	0.91	0.763522
6060	3R_DroMel_CAF1	15,928,654 – 15,928,772	- - - - - - - - -	9885	15,928,654 – 15,928,772	-	6	118	96.33	-1.50	0.87	0.716246
6061	3R_DroMel_CAF1	15,929,477 – 15,929,608	- - - - - - - - -	9886	15,929,477 – 15,929,596	-	6	120	84.62	-2.23	0.72	0.594538
				9887	15,929,516 – 15,929,608	+	5	92	96.30	-2.99	0.89	0.999698
				9888	15,929,516 – 15,929,608	-	5	92	96.30	-2.57	0.88	0.998944
6062	3R_DroMel_CAF1	15,930,768 – 15,930,860	- - - - - - - - -	9889	15,930,768 – 15,930,860	+	3	112	71.07	-2.54	0.66	0.999955
6063	3R_DroMel_CAF1	15,931,052 – 15,931,159	- - - - - - - - -	9890	15,931,052 – 15,931,159	+	6	120	92.03	-2.30	0.86	0.962164
6063	3R_DroMel_CAF1	15,931,052 – 15,931,159	- - - - - - - - -	9891	15,931,052 – 15,931,159	-	6	120	92.03	-2.02	0.87	0.939581
6064	3R_DroMel_CAF1	15,931,763 – 15,932,035	- - - - - - - - -	9892	15,931,763 – 15,931,879	-	5	120	89.03	-1.90	0.79	0.875077
				9893	15,931,879 – 15,931,995	-	5	120	83.67	-1.87	0.64	0.602200
				9894	15,931,917 – 15,932,035	-	4	118	82.60	-1.91	0.72	0.831910
6065	3R_DroMel_CAF1	15,933,133 – 15,933,244	- - - "knownCDS=Parent=FBtr0083875;Name=CG31206-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31206-RA" - - - - -	9895	15,933,133 – 15,933,244	-	4	120	85.57	-2.48	0.64	0.847673
6066	3R_DroMel_CAF1	15,933,489 – 15,933,600	- - - "knownCDS=Parent=FBtr0083875;Name=CG31206-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31206-RA" - - - - -	9896	15,933,489 – 15,933,600	+	6	120	74.65	-1.74	0.52	0.705931
6067	3R_DroMel_CAF1	15,934,065 – 15,934,195	- - - - - - - - -	9897	15,934,065 – 15,934,180	-	6	120	92.29	-2.11	0.82	0.654170
6067	3R_DroMel_CAF1	15,934,065 – 15,934,195	- - - - - - - - -	9898	15,934,105 – 15,934,195	-	5	90	97.67	-2.70	0.89	0.998617
6068	3R_DroMel_CAF1	15,934,235 – 15,934,336	- - - - - - - - -	9899	15,934,235 – 15,934,336	+	6	120	84.22	-3.07	0.61	0.625957
6069	3R_DroMel_CAF1	15,934,653 – 15,934,758	- - - - - - - - -	9900	15,934,653 – 15,934,758	+	3	110	72.08	-0.38	0.89	0.811960
6070	3R_DroMel_CAF1	15,947,226 – 15,947,386	- - - "knownCDS=Parent=FBtr0083865;Name=Gr92a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31208-RA" - - - - -	9901	15,947,226 – 15,947,346	+	5	120	90.92	-1.67	0.75	0.589889
6070	3R_DroMel_CAF1	15,947,226 – 15,947,386		9902	15,947,266 – 15,947,386	+	5	120	90.42	-1.62	0.84	0.868331
6071	3R_DroMel_CAF1	15,949,027 – 15,949,122	- - - - - - - - -	9903	15,949,027 – 15,949,122	+	5	102	87.73	-1.98	0.79	0.902180
6071	3R_DroMel_CAF1	15,949,027 – 15,949,122	- - - - - - - - -	9904	15,949,027 – 15,949,122	-	5	102	87.73	-1.58	0.86	0.790282
6072	3R_DroMel_CAF1	15,949,377 – 15,949,471	- - - - - - - - -	9905	15,949,377 – 15,949,471	+	6	120	82.80	-1.89	0.68	0.614800
6073	3R_DroMel_CAF1	15,949,531 – 15,949,621	- - - - - - - - -	9906	15,949,531 – 15,949,621	+	5	97	88.94	-2.63	0.79	0.989494
6073	3R_DroMel_CAF1	15,949,531 – 15,949,621	- - - - - - - - -	9907	15,949,531 – 15,949,621	-	5	97	88.94	-1.87	0.79	0.876864
6074	3R_DroMel_CAF1	15,950,233 – 15,950,368	- - - - - - - - -	9908	15,950,233 – 15,950,331	-	5	98	88.88	-1.99	0.77	0.871788
6074	3R_DroMel_CAF1	15,950,233 – 15,950,368	- - - - - - - - -	9909	15,950,265 – 15,950,368	+	5	103	87.38	-3.06	0.63	0.799603
6075	3R_DroMel_CAF1	15,952,006 – 15,952,184	- - - - - - - - -	9910	15,952,006 – 15,952,114	-	5	112	86.55	-2.63	0.78	0.985526
6075	3R_DroMel_CAF1	15,952,006 – 15,952,184	- - - - - - - - -	9911	15,952,079 – 15,952,184	-	5	105	94.84	-1.36	0.83	0.541925
6076	3R_DroMel_CAF1	15,954,538 – 15,954,657	- - - - - - - - -	9912	15,954,538 – 15,954,657	-	6	119	90.03	-2.75	0.77	0.619528
6077	3R_DroMel_CAF1	15,955,405 – 15,955,498	- - - - - - - - -	9913	15,955,405 – 15,955,498	+	6	120	81.20	-2.28	0.58	0.741322
6078	3R_DroMel_CAF1	15,958,089 – 15,958,182	- - - - - - - - -	9914	15,958,089 – 15,958,182	-	6	106	73.69	-2.19	0.46	0.937215
6079	3R_DroMel_CAF1	15,958,371 – 15,958,462	- - - - - - - - -	9915	15,958,371 – 15,958,462	+	6	102	86.85	-3.69	0.68	0.684757
6079	3R_DroMel_CAF1	15,958,371 – 15,958,462	- - - - - - - - -	9916	15,958,371 – 15,958,462	-	6	102	86.85	-3.91	0.70	0.825500
6080	3R_DroMel_CAF1	15,960,426 – 15,960,534	- - - - - - - - -	9917	15,960,426 – 15,960,534	-	6	120	71.17	-1.68	0.45	0.591522
6081	3R_DroMel_CAF1	15,961,800 – 15,961,929	- - - - - - - - -	9918	15,961,800 – 15,961,909	-	5	116	83.81	-2.29	0.61	0.771851
6081	3R_DroMel_CAF1	15,961,800 – 15,961,929	- - - - - - - - -	9919	15,961,839 – 15,961,929	-	6	103	76.81	-1.96	0.56	0.871414
6082	3R_DroMel_CAF1	15,963,425 – 15,963,528	- - - - - - - - -	9920	15,963,425 – 15,963,528	-	5	104	83.61	-2.13	0.68	0.832302
6083	3R_DroMel_CAF1	15,963,713 – 15,963,819	- - - - - - - - -	9921	15,963,713 – 15,963,819	+	6	116	91.65	-2.64	0.91	0.998343
6083	3R_DroMel_CAF1	15,963,713 – 15,963,819	- - - - - - - - -	9922	15,963,713 – 15,963,819	-	6	116	91.65	-3.35	0.92	0.999765
6084	3R_DroMel_CAF1	15,964,166 – 15,964,262	- - - - - - - - -	9923	15,964,166 – 15,964,262	+	6	108	86.00	-2.03	0.79	0.616572
6085	3R_DroMel_CAF1	15,964,682 – 15,964,798	- - - - - - - - -	9924	15,964,682 – 15,964,798	+	5	119	76.56	-2.17	0.66	0.978826
6086	3R_DroMel_CAF1	15,966,775 – 15,966,883	- - - - - - - - -	9925	15,966,775 – 15,966,883	-	3	108	92.59	-1.73	0.87	0.500000
6087	3R_DroMel_CAF1	15,967,449 – 15,967,725	- - - - - - - - -	9926	15,967,449 – 15,967,560	+	6	120	85.87	-2.93	0.80	0.904899
				9927	15,967,560 – 15,967,670	+	6	117	79.27	-1.66	0.57	0.522585
				9928	15,967,597 – 15,967,696	+	6	118	73.61	-2.37	0.29	0.773631
				9929	15,967,597 – 15,967,696	-	6	118	73.61	-2.40	0.38	0.938737
				9930	15,967,631 – 15,967,725	+	6	113	79.60	-2.65	0.45	0.791622
				9931	15,967,631 – 15,967,725	-	6	113	79.60	-2.59	0.43	0.714958
6088	3R_DroMel_CAF1	15,968,412 – 15,968,503	- - - - - - - - -	9932	15,968,412 – 15,968,503	-	5	91	99.56	-1.53	1.00	0.913073
6089	3R_DroMel_CAF1	15,973,110 – 15,973,219	- - - - - - - - -	9933	15,973,110 – 15,973,219	-	6	120	89.22	-2.28	0.81	0.695730
6090	3R_DroMel_CAF1	15,973,336 – 15,973,432	- - - - - - - - -	9934	15,973,336 – 15,973,432	+	6	96	97.92	-1.79	0.89	0.953566
6091	3R_DroMel_CAF1	15,973,472 – 15,973,575	- - - - - - - - -	9935	15,973,472 – 15,973,575	-	6	117	80.17	-2.15	0.52	0.629484
6092	3R_DroMel_CAF1	15,974,413 – 15,974,533	- - - - - - - - -	9936	15,974,413 – 15,974,533	+	6	120	96.78	-1.42	0.86	0.571637
6092	3R_DroMel_CAF1	15,974,413 – 15,974,533	- - - - - - - - -	9937	15,974,413 – 15,974,533	-	6	120	96.78	-0.99	0.92	0.592390
6093	3R_DroMel_CAF1	15,981,466 – 15,981,556	- - - - - - - - -	9938	15,981,466 – 15,981,556	-	5	106	82.10	-1.84	0.62	0.606315
6094	3R_DroMel_CAF1	15,982,362 – 15,982,452	- - - - - - - - -	9939	15,982,362 – 15,982,452	+	5	104	85.88	-1.74	0.69	0.564959
6094	3R_DroMel_CAF1	15,982,362 – 15,982,452	- - - - - - - - -	9940	15,982,362 – 15,982,452	-	5	104	85.88	-2.60	0.79	0.984355
6095	3R_DroMel_CAF1	15,992,976 – 15,993,083	- - - - - - - - -	9941	15,992,976 – 15,993,083	-	6	120	80.45	-1.69	0.64	0.698588
6096	3R_DroMel_CAF1	15,993,555 – 15,993,652	- - - - - - - - -	9942	15,993,555 – 15,993,652	+	3	100	71.28	-2.43	0.56	0.997506
6097	3R_DroMel_CAF1	15,993,870 – 15,993,966	- - - - - - - - -	9943	15,993,870 – 15,993,966	+	5	98	89.09	-1.41	0.88	0.723639
6098	3R_DroMel_CAF1	15,994,808 – 15,994,905	- - - - - - - - -	9944	15,994,808 – 15,994,905	-	5	116	80.98	-2.53	0.54	0.928548
6099	3R_DroMel_CAF1	15,994,998 – 15,995,097	- - - - - - - - -	9945	15,994,998 – 15,995,097	-	4	114	65.88	-1.42	0.60	0.887625
6100	3R_DroMel_CAF1	15,997,225 – 15,997,336	- - - - - - - - -	9946	15,997,225 – 15,997,336	+	5	118	84.71	-2.29	0.63	0.744738
6100	3R_DroMel_CAF1	15,997,225 – 15,997,336	- - - - - - - - -	9947	15,997,225 – 15,997,336	-	5	118	84.71	-1.87	0.67	0.638548
6101	3R_DroMel_CAF1	15,999,877 – 15,999,997	- - - "knownCDS=Parent=FBtr0083866;Name=CG5023-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5023-RA" - - - - -	9948	15,999,877 – 15,999,997	+	6	120	94.06	-1.81	0.91	0.979094
6102	3R_DroMel_CAF1	16,000,666 – 16,000,760	- - - - - - - - -	9949	16,000,666 – 16,000,760	+	6	94	73.76	-1.48	0.69	0.930297
6103	3R_DroMel_CAF1	16,003,875 – 16,003,998	- - - - - - - - -	9950	16,003,875 – 16,003,968	+	6	113	74.11	-2.33	0.44	0.953296
6103	3R_DroMel_CAF1	16,003,875 – 16,003,998	- - - - - - - - -	9951	16,003,905 – 16,003,998	+	6	108	82.48	-2.33	0.74	0.836858
6104	3R_DroMel_CAF1	16,005,777 – 16,005,873	- - - - - - - - -	9952	16,005,777 – 16,005,873	-	6	109	76.73	-1.78	0.63	0.906154
6105	3R_DroMel_CAF1	16,006,282 – 16,006,417	- - - - - - - - -	9953	16,006,282 – 16,006,402	+	4	120	78.93	-1.65	0.65	0.571659
6105	3R_DroMel_CAF1	16,006,282 – 16,006,417	- - - - - - - - -	9954	16,006,322 – 16,006,417	+	4	120	65.38	-1.42	0.57	0.852076
6106	3R_DroMel_CAF1	16,009,014 – 16,009,113	- - - - - - - - -	9955	16,009,014 – 16,009,113	+	6	99	83.76	-1.89	0.74	0.618147
6107	3R_DroMel_CAF1	16,010,307 – 16,010,439	- - - - - - - - -	9956	16,010,307 – 16,010,423	+	6	117	80.06	-2.03	0.57	0.711776
6107	3R_DroMel_CAF1	16,010,307 – 16,010,439	- - - - - - - - -	9957	16,010,344 – 16,010,439	+	6	102	80.88	-2.02	0.59	0.685209
6108	3R_DroMel_CAF1	16,013,757 – 16,013,880	- - - - - - - - -	9958	16,013,757 – 16,013,847	-	5	115	73.48	-2.22	0.68	0.994523
6108	3R_DroMel_CAF1	16,013,757 – 16,013,880	- - - - - - - - -	9959	16,013,782 – 16,013,880	-	5	116	78.92	-2.04	0.78	0.960511
6109	3R_DroMel_CAF1	16,016,831 – 16,016,943	- - - - - - - - -	9960	16,016,831 – 16,016,943	+	5	119	87.00	-3.08	0.79	0.996241
6109	3R_DroMel_CAF1	16,016,831 – 16,016,943	- - - - - - - - -	9961	16,016,831 – 16,016,943	-	5	119	87.00	-2.26	0.80	0.966731
6110	3R_DroMel_CAF1	16,018,779 – 16,018,871	- - - - - - - - -	9962	16,018,779 – 16,018,871	+	6	120	75.02	-0.85	0.72	0.594302
6111	3R_DroMel_CAF1	16,019,297 – 16,019,414	- - - - - - - - -	9963	16,019,297 – 16,019,414	-	3	117	75.89	-1.60	0.64	0.729394
6112	3R_DroMel_CAF1	16,025,639 – 16,025,734	- - - - - - - - -	9964	16,025,639 – 16,025,734	+	6	95	91.36	-2.23	0.80	0.573979
6113	3R_DroMel_CAF1	16,027,383 – 16,027,488	- - - - - - - - -	9965	16,027,383 – 16,027,488	-	5	105	89.33	-2.51	0.73	0.895524
6114	3R_DroMel_CAF1	16,033,835 – 16,033,933	- - - - - - - - -	9966	16,033,835 – 16,033,933	-	3	102	80.48	-0.89	0.87	0.544640
6115	3R_DroMel_CAF1	16,034,102 – 16,034,212	- - - "knownCDS=Parent=FBtr0083874;Name=CG17199-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17199-RA" - - - - -	9967	16,034,102 – 16,034,212	+	6	118	82.60	-1.89	0.70	0.666077
6116	3R_DroMel_CAF1	16,035,616 – 16,035,720	- - - - - - - - -	9968	16,035,616 – 16,035,720	+	3	114	79.06	-3.26	0.57	0.985956
6116	3R_DroMel_CAF1	16,035,616 – 16,035,720	- - - - - - - - -	9969	16,035,616 – 16,035,720	-	3	114	79.06	-1.97	0.58	0.583466
6117	3R_DroMel_CAF1	16,040,686 – 16,040,778	- - - - - - - - -	9970	16,040,686 – 16,040,778	-	4	97	86.10	-2.13	0.69	0.827447
6118	3R_DroMel_CAF1	16,042,966 – 16,043,160	- - - - - - - - -	9971	16,042,966 – 16,043,086	-	4	120	88.26	-1.55	0.76	0.614022
6118	3R_DroMel_CAF1	16,042,966 – 16,043,160	- - - - - - - - -	9972	16,043,046 – 16,043,160	+	4	114	95.18	-1.60	0.90	0.659138
6119	3R_DroMel_CAF1	16,044,191 – 16,044,286	- - - - - - - - -	9973	16,044,191 – 16,044,286	+	5	120	75.43	-2.07	0.47	0.906701
6120	3R_DroMel_CAF1	16,044,347 – 16,044,561	- - - - - - - - -	9974	16,044,347 – 16,044,442	-	4	95	96.84	-1.65	0.97	0.724121
				9975	16,044,369 – 16,044,466	+	4	97	97.94	-1.71	0.99	0.699582
				9976	16,044,369 – 16,044,466	-	4	97	97.94	-1.81	0.98	0.758575
				9977	16,044,466 – 16,044,561	-	4	108	87.85	-1.59	0.72	0.599805
6121	3R_DroMel_CAF1	16,046,832 – 16,046,941	- - - - - - - - -	9978	16,046,832 – 16,046,941	+	4	115	87.81	-1.72	0.76	0.716146
6121	3R_DroMel_CAF1	16,046,832 – 16,046,941	- - - - - - - - -	9979	16,046,832 – 16,046,941	-	4	115	87.81	-2.03	0.68	0.707149
6122	3R_DroMel_CAF1	16,047,001 – 16,047,120	- - - - - - - - -	9980	16,047,001 – 16,047,094	-	6	120	81.35	-1.20	0.76	0.542858
6122	3R_DroMel_CAF1	16,047,001 – 16,047,120	- - - - - - - - -	9981	16,047,016 – 16,047,120	-	6	120	86.99	-1.91	0.88	0.878350
6123	3R_DroMel_CAF1	16,048,673 – 16,048,782	- - - - - - - - -	9982	16,048,673 – 16,048,782	+	4	109	93.88	-2.15	0.85	0.883528
6123	3R_DroMel_CAF1	16,048,673 – 16,048,782	- - - - - - - - -	9983	16,048,673 – 16,048,782	-	4	109	93.88	-1.52	0.89	0.635510
6124	3R_DroMel_CAF1	16,049,418 – 16,049,517	- - - - - - - - -	9984	16,049,418 – 16,049,517	+	4	105	91.26	-1.86	0.75	0.636190
6125	3R_DroMel_CAF1	16,052,537 – 16,052,654	- - - - - - - - -	9985	16,052,537 – 16,052,654	+	4	117	78.58	-2.41	0.76	0.993177
6126	3R_DroMel_CAF1	16,053,617 – 16,053,864	- - - "knownCDS=Parent=FBtr0083870;Name=CG31209-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31209-RA" - - - - -	9986	16,053,617 – 16,053,724	-	6	120	80.05	-1.62	0.60	0.547624
				9987	16,053,657 – 16,053,751	-	6	120	76.41	-1.62	0.60	0.761691
				9988	16,053,751 – 16,053,864	-	6	120	83.77	-1.99	0.88	0.887291
6127	3R_DroMel_CAF1	16,057,311 – 16,057,421	- - - - - - - - -	9989	16,057,311 – 16,057,421	+	4	115	87.39	-1.84	0.71	0.724527
6128	3R_DroMel_CAF1	16,057,887 – 16,057,988	- - - - - - - - -	9990	16,057,887 – 16,057,988	-	5	112	82.41	-2.43	0.77	0.975951
6129	3R_DroMel_CAF1	16,058,225 – 16,058,317	- - - - - - - - -	9991	16,058,225 – 16,058,317	+	4	106	90.91	-1.86	0.86	0.876919
6129	3R_DroMel_CAF1	16,058,225 – 16,058,317	- - - - - - - - -	9992	16,058,225 – 16,058,317	-	4	106	90.91	-2.58	0.93	0.993989
6130	3R_DroMel_CAF1	16,058,978 – 16,059,083	- - - - - - - - -	9993	16,058,978 – 16,059,083	-	6	118	81.07	-2.06	0.56	0.584099
6131	3R_DroMel_CAF1	16,060,136 – 16,060,229	- - - - - - - - -	9994	16,060,136 – 16,060,229	+	6	120	80.59	-2.47	0.73	0.933709
6132	3R_DroMel_CAF1	16,060,998 – 16,061,096	- - - - - - - - -	9995	16,060,998 – 16,061,096	-	5	98	89.90	-2.19	0.78	0.940585
6133	3R_DroMel_CAF1	16,061,199 – 16,061,337	- - - - - - - - -	9996	16,061,199 – 16,061,298	+	4	107	91.75	-2.21	0.89	0.969138
				9997	16,061,199 – 16,061,298	-	4	107	91.75	-1.84	0.84	0.824960
				9998	16,061,239 – 16,061,337	+	4	106	86.44	-3.11	0.84	0.994721
				9999	16,061,239 – 16,061,337	-	4	106	86.44	-2.01	0.68	0.761459
6134	3R_DroMel_CAF1	16,069,662 – 16,069,754	- - - - - - - - -	10000	16,069,662 – 16,069,754	+	6	104	83.05	-2.38	0.74	0.803811
6134	3R_DroMel_CAF1	16,069,662 – 16,069,754	- - - - - - - - -	10001	16,069,662 – 16,069,754	-	6	104	83.05	-1.83	0.66	0.539420
6135	3R_DroMel_CAF1	16,070,842 – 16,070,977	- - - - - - - - -	10002	16,070,842 – 16,070,959	+	5	117	82.82	-2.78	0.53	0.888344
				10003	16,070,842 – 16,070,959	-	5	117	82.82	-2.08	0.55	0.555897
				10004	16,070,879 – 16,070,977	-	5	98	85.51	-1.77	0.77	0.734137
6136	3R_DroMel_CAF1	16,078,160 – 16,078,293	- - - - - - - - -	10005	16,078,160 – 16,078,269	-	5	119	70.35	-2.09	0.53	0.976896
6136	3R_DroMel_CAF1	16,078,160 – 16,078,293	- - - - - - - - -	10006	16,078,199 – 16,078,293	-	3	115	63.53	-1.77	0.48	0.776976
6137	3R_DroMel_CAF1	16,078,414 – 16,078,506	- - - - - - - - -	10007	16,078,414 – 16,078,506	+	5	92	86.85	-3.29	0.67	0.952564
6137	3R_DroMel_CAF1	16,078,414 – 16,078,506	- - - - - - - - -	10008	16,078,414 – 16,078,506	-	5	92	86.85	-2.18	0.70	0.788850
6138	3R_DroMel_CAF1	16,080,079 – 16,080,172	- - - - - - - - -	10009	16,080,079 – 16,080,172	+	5	93	94.19	-2.02	0.78	0.812273
6139	3R_DroMel_CAF1	16,080,438 – 16,080,531	- - - - - - - - -	10010	16,080,438 – 16,080,531	-	6	93	85.64	-3.91	0.72	0.897401
6140	3R_DroMel_CAF1	16,083,572 – 16,083,668	- - - - - - - - -	10011	16,083,572 – 16,083,668	-	6	108	85.21	-1.42	0.86	0.522251
6141	3R_DroMel_CAF1	16,084,467 – 16,084,563	- - - - - - - - -	10012	16,084,467 – 16,084,563	+	6	101	79.73	-1.50	0.79	0.823091
6142	3R_DroMel_CAF1	16,090,702 – 16,090,796	- - - - - - - - -	10013	16,090,702 – 16,090,796	+	6	100	82.43	-2.39	0.57	0.589575
6142	3R_DroMel_CAF1	16,090,702 – 16,090,796	- - - - - - - - -	10014	16,090,702 – 16,090,796	-	6	100	82.43	-2.13	0.61	0.595590
6143	3R_DroMel_CAF1	16,091,135 – 16,091,229	- - - - - - - - -	10015	16,091,135 – 16,091,229	+	3	94	92.91	-2.16	0.88	0.802116
6143	3R_DroMel_CAF1	16,091,135 – 16,091,229	- - - - - - - - -	10016	16,091,135 – 16,091,229	-	3	94	92.91	-2.65	0.87	0.909321
6144	3R_DroMel_CAF1	16,100,716 – 16,100,818	- - - - - - - - -	10017	16,100,716 – 16,100,818	+	5	103	77.11	-2.11	0.45	0.863366
6145	3R_DroMel_CAF1	16,101,654 – 16,101,757	- - - - - - - - -	10018	16,101,654 – 16,101,757	+	6	115	77.11	-2.71	0.37	0.883383
6146	3R_DroMel_CAF1	16,103,445 – 16,103,582	- - - - - - - - -	10019	16,103,445 – 16,103,549	+	5	114	77.29	-2.00	0.51	0.810991
6146	3R_DroMel_CAF1	16,103,445 – 16,103,582	- - - - - - - - -	10020	16,103,474 – 16,103,582	+	4	108	80.71	-1.72	0.64	0.573682
6147	3R_DroMel_CAF1	16,105,395 – 16,105,495	- - - - - - - - -	10021	16,105,395 – 16,105,495	-	5	101	88.83	-2.16	0.87	0.992340
6148	3R_DroMel_CAF1	16,109,535 – 16,109,636	- - - - - - - - -	10022	16,109,535 – 16,109,636	+	6	113	78.31	-1.54	0.62	0.682790
6148	3R_DroMel_CAF1	16,109,535 – 16,109,636	- - - - - - - - -	10023	16,109,535 – 16,109,636	-	6	113	78.31	-1.36	0.78	0.842600
6149	3R_DroMel_CAF1	16,111,696 – 16,111,789	- - - - - - - - -	10024	16,111,696 – 16,111,789	+	4	93	85.71	-1.66	0.87	0.783551
6150	3R_DroMel_CAF1	16,112,091 – 16,112,198	- - - - - - - - -	10025	16,112,091 – 16,112,198	-	6	107	92.71	-2.08	0.87	0.946691
6151	3R_DroMel_CAF1	16,112,463 – 16,112,573	- - - - - - - - -	10026	16,112,463 – 16,112,573	-	5	119	93.84	-1.49	0.88	0.897995
6152	3R_DroMel_CAF1	16,115,362 – 16,115,470	- - - "knownCDS=Parent=FBtr0083871;Name=CG5060-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5060-RA" - - - - -	10027	16,115,362 – 16,115,470	+	6	108	86.48	-1.84	0.90	0.894779
6153	3R_DroMel_CAF1	16,117,092 – 16,117,345	- - - - - - - - -	10028	16,117,092 – 16,117,198	+	6	107	76.12	-1.85	0.48	0.577235
				10029	16,117,092 – 16,117,198	-	6	107	76.12	-1.86	0.55	0.829717
				10030	16,117,124 – 16,117,226	+	6	110	77.86	-1.36	0.74	0.834153
				10031	16,117,124 – 16,117,226	-	6	110	77.86	-1.23	0.64	0.500000
				10032	16,117,226 – 16,117,345	-	5	119	92.86	-2.16	0.85	0.993502
6154	3R_DroMel_CAF1	16,117,385 – 16,117,498	- - - - - - - - -	10033	16,117,385 – 16,117,498	+	4	116	83.65	-2.03	0.58	0.515549
6155	3R_DroMel_CAF1	16,121,156 – 16,121,248	- - - "knownCDS=Parent=FBtr0083872;Name=cic-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5067-RA" - - - - -	10034	16,121,156 – 16,121,248	-	6	104	81.46	-2.07	0.70	0.821521
6156	3R_DroMel_CAF1	16,124,301 – 16,124,407	- - - "knownCDS=Parent=FBtr0083872;Name=cic-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5067-RA" - - - - -	10035	16,124,301 – 16,124,407	-	6	107	83.01	-2.18	0.75	0.787723
6157	3R_DroMel_CAF1	16,133,255 – 16,133,347	- - - - - - - - -	10036	16,133,255 – 16,133,347	+	6	120	59.24	-1.65	0.32	0.511132
6158	3R_DroMel_CAF1	16,141,585 – 16,141,692	- - - - - - - - -	10037	16,141,585 – 16,141,692	+	6	115	79.79	-1.54	0.67	0.718129
6159	3R_DroMel_CAF1	16,142,789 – 16,142,890	- - - - - - - - -	10038	16,142,789 – 16,142,890	+	5	101	81.33	-2.10	0.58	0.755097
6160	3R_DroMel_CAF1	16,145,904 – 16,146,009	- - - - - - - - -	10039	16,145,904 – 16,146,009	-	6	105	77.18	-2.20	0.80	0.975634
6161	3R_DroMel_CAF1	16,146,197 – 16,146,303	- - - - - - - - -	10040	16,146,197 – 16,146,303	-	6	112	78.71	-2.16	0.47	0.610299
6162	3R_DroMel_CAF1	16,147,890 – 16,148,060	- - - "knownCDS=Parent=FBtr0083881, FBtr0083880, FBtr0083878, FBtr0083879;Name=CG5077-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5077-RD, FlyBase+Annotation+IDs:CG5077-RC, FlyBase+Annotation+IDs:CG5077-RA, FlyBase+Annotation+IDs:CG5077-RB" - - - - -	10041	16,147,890 – 16,147,980	+	6	90	86.67	-1.63	0.86	0.661549
				10042	16,147,940 – 16,148,060	+	6	120	81.39	-2.04	0.77	0.868752
				10043	16,147,940 – 16,148,060	-	6	120	81.39	-2.36	0.58	0.762829
6163	3R_DroMel_CAF1	16,153,720 – 16,153,813	- - - - - - - - -	10044	16,153,720 – 16,153,813	+	5	94	89.47	-2.51	0.91	0.999549
6164	3R_DroMel_CAF1	16,156,184 – 16,156,275	- - - - - - - - -	10045	16,156,184 – 16,156,275	+	5	91	98.68	-2.52	0.96	0.999364
6164	3R_DroMel_CAF1	16,156,184 – 16,156,275	- - - - - - - - -	10046	16,156,184 – 16,156,275	-	5	91	98.68	-1.16	1.00	0.591788
6165	3R_DroMel_CAF1	16,156,440 – 16,156,542	- - - - - - - - -	10047	16,156,440 – 16,156,542	+	5	102	95.69	-1.45	0.91	0.919148
6166	3R_DroMel_CAF1	16,157,703 – 16,157,860	- - - - - - - - -	10048	16,157,703 – 16,157,822	+	5	120	78.11	-3.07	0.61	0.998647
				10049	16,157,703 – 16,157,822	-	5	120	78.11	-2.09	0.59	0.907060
				10050	16,157,743 – 16,157,860	+	5	120	90.61	-1.92	0.72	0.604315
				10051	16,157,743 – 16,157,860	-	5	120	90.61	-2.14	0.77	0.900680
6167	3R_DroMel_CAF1	16,158,823 – 16,158,935	- - - - - - - - -	10052	16,158,823 – 16,158,935	+	6	116	86.63	-2.04	0.78	0.548784
6168	3R_DroMel_CAF1	16,160,633 – 16,160,734	- - - - - - - - -	10053	16,160,633 – 16,160,734	+	4	120	78.70	-1.64	0.65	0.553004
6169	3R_DroMel_CAF1	16,161,136 – 16,161,303	- - - - - - - - -	10054	16,161,136 – 16,161,246	-	5	110	89.92	-2.01	0.75	0.817162
				10055	16,161,176 – 16,161,274	+	5	99	82.04	-4.23	0.54	0.997246
				10056	16,161,176 – 16,161,274	-	5	99	82.04	-2.73	0.60	0.963599
				10057	16,161,212 – 16,161,303	+	5	92	73.54	-3.56	0.57	0.999915
6170	3R_DroMel_CAF1	16,162,799 – 16,162,902	- - - - - - - - -	10058	16,162,799 – 16,162,902	+	4	104	96.62	-2.10	0.89	0.840649
6170	3R_DroMel_CAF1	16,162,799 – 16,162,902	- - - - - - - - -	10059	16,162,799 – 16,162,902	-	4	104	96.62	-1.89	0.86	0.626908
6171	3R_DroMel_CAF1	16,163,597 – 16,163,702	- - - - - - - - -	10060	16,163,597 – 16,163,702	+	5	120	76.48	-1.65	0.60	0.624978
6172	3R_DroMel_CAF1	16,163,935 – 16,164,034	- - - - - - - - -	10061	16,163,935 – 16,164,034	-	5	109	85.19	-2.14	0.65	0.699013
6173	3R_DroMel_CAF1	16,167,440 – 16,167,531	- - - - - - - - -	10062	16,167,440 – 16,167,531	+	6	97	82.44	-2.44	0.62	0.724253
6173	3R_DroMel_CAF1	16,167,440 – 16,167,531	- - - - - - - - -	10063	16,167,440 – 16,167,531	-	6	97	82.44	-2.57	0.58	0.686668
6174	3R_DroMel_CAF1	16,169,666 – 16,169,766	- - - - - - - - -	10064	16,169,666 – 16,169,766	-	6	100	84.69	-1.86	0.75	0.543123
6175	3R_DroMel_CAF1	16,170,538 – 16,170,639	- - - - - - - - -	10065	16,170,538 – 16,170,639	+	6	111	83.13	-1.54	0.79	0.597202
6176	3R_DroMel_CAF1	16,170,784 – 16,170,884	- - - - - - - - -	10066	16,170,784 – 16,170,884	+	5	120	71.28	-1.94	0.23	0.876646
6177	3R_DroMel_CAF1	16,172,392 – 16,172,484	- - - - - - - - -	10067	16,172,392 – 16,172,484	-	3	92	78.91	-2.39	0.62	0.948630
6178	3R_DroMel_CAF1	16,172,746 – 16,172,841	- - - - - - - - -	10068	16,172,746 – 16,172,841	+	4	96	80.14	-1.46	0.74	0.508563
6178	3R_DroMel_CAF1	16,172,746 – 16,172,841	- - - - - - - - -	10069	16,172,746 – 16,172,841	-	4	96	80.14	-2.85	0.63	0.992843
6179	3R_DroMel_CAF1	16,175,115 – 16,175,223	- - - - - - - - -	10070	16,175,115 – 16,175,223	+	4	110	88.41	-2.07	0.76	0.857018
6180	3R_DroMel_CAF1	16,176,064 – 16,176,156	- - - - - - - - -	10071	16,176,064 – 16,176,156	+	4	92	92.57	-2.21	0.86	0.938919
6181	3R_DroMel_CAF1	16,177,191 – 16,177,311	- - - - - - - - -	10072	16,177,191 – 16,177,311	+	6	120	90.94	-1.55	0.86	0.618766
6182	3R_DroMel_CAF1	16,178,640 – 16,178,782	- - - - - - - - -	10073	16,178,640 – 16,178,742	-	6	120	76.40	-1.70	0.53	0.605322
				10074	16,178,664 – 16,178,782	+	5	119	88.88	-1.54	0.74	0.500000
				10075	16,178,664 – 16,178,782	-	5	119	88.88	-2.36	0.68	0.671653
6183	3R_DroMel_CAF1	16,180,817 – 16,180,962	- - - - - - - - -	10076	16,180,817 – 16,180,922	+	4	114	75.99	-2.11	0.71	0.983614
6183	3R_DroMel_CAF1	16,180,817 – 16,180,962	- - - - - - - - -	10077	16,180,842 – 16,180,962	-	6	120	81.49	-1.60	0.66	0.607321
6184	3R_DroMel_CAF1	16,181,294 – 16,181,447	- - - - - - - - -	10078	16,181,294 – 16,181,407	-	5	113	94.69	-1.26	0.90	0.744490
6184	3R_DroMel_CAF1	16,181,294 – 16,181,447	- - - - - - - - -	10079	16,181,327 – 16,181,447	-	5	120	89.75	-2.13	0.76	0.898631
6185	3R_DroMel_CAF1	16,182,086 – 16,182,184	- - - - - - - - -	10080	16,182,086 – 16,182,184	+	5	110	85.62	-2.04	0.73	0.815711
6186	3R_DroMel_CAF1	16,182,850 – 16,182,944	- - - - - - - - -	10081	16,182,850 – 16,182,944	+	6	120	82.01	-2.36	0.62	0.756079
6187	3R_DroMel_CAF1	16,183,197 – 16,183,311	- - - "knownCDS=texon3856;Parent=CG_RGUI_GID_mRNA_40008856, CG_DGIL_SNO_28366303" - - - - -	10082	16,183,197 – 16,183,311	-	6	120	84.06	-2.07	0.69	0.533876
6188	3R_DroMel_CAF1	16,184,299 – 16,184,485	- - - - - - - - -	10083	16,184,299 – 16,184,405	+	5	115	83.17	-2.36	0.60	0.820185
6188	3R_DroMel_CAF1	16,184,299 – 16,184,485	- - - - - - - - -	10084	16,184,374 – 16,184,485	-	5	120	88.75	-1.71	0.88	0.932156
6189	3R_DroMel_CAF1	16,185,016 – 16,185,110	- - - - - - - - -	10085	16,185,016 – 16,185,110	+	3	101	91.42	-2.48	0.79	0.717247
6190	3R_DroMel_CAF1	16,186,420 – 16,186,537	- - - - - - - - -	10086	16,186,420 – 16,186,514	+	6	120	83.51	-4.58	0.70	0.963567
				10087	16,186,420 – 16,186,514	-	6	120	83.51	-2.47	0.62	0.567865
				10088	16,186,439 – 16,186,537	+	6	120	86.08	-3.35	0.75	0.843839
6191	3R_DroMel_CAF1	16,186,762 – 16,186,858	- - - - - - - - -	10089	16,186,762 – 16,186,858	+	5	97	95.46	-1.37	0.90	0.838538
6192	3R_DroMel_CAF1	16,186,903 – 16,187,015	- - - - - - - - -	10090	16,186,903 – 16,187,015	+	6	120	93.08	-1.37	0.94	0.937741
6193	3R_DroMel_CAF1	16,188,108 – 16,188,223	- - - - - - - - -	10091	16,188,108 – 16,188,223	+	5	115	98.61	-1.29	1.00	0.808290
6194	3R_DroMel_CAF1	16,188,682 – 16,188,796	- - - - - - - - -	10092	16,188,682 – 16,188,796	+	6	120	93.22	-2.10	0.84	0.863457
6195	3R_DroMel_CAF1	16,189,858 – 16,190,126	- - - - - - - - -	10093	16,189,858 – 16,189,973	-	5	120	94.70	-1.52	0.93	0.967006
				10094	16,189,933 – 16,190,046	-	5	120	85.92	-1.62	0.71	0.537271
				10095	16,190,006 – 16,190,126	+	5	120	96.67	-1.46	0.95	0.945943
6196	3R_DroMel_CAF1	16,190,166 – 16,190,326	- - - - - - - - -	10096	16,190,166 – 16,190,286	+	5	120	97.67	-1.38	0.92	0.809988
				10097	16,190,166 – 16,190,286	-	5	120	97.67	-2.17	0.97	0.999241
				10098	16,190,206 – 16,190,326	-	5	120	98.50	-1.42	1.00	0.911684
6197	3R_DroMel_CAF1	16,190,735 – 16,190,910	- - - - - - - - -	10099	16,190,735 – 16,190,855	-	5	120	98.58	-2.23	0.96	0.998391
				10100	16,190,775 – 16,190,895	+	5	120	97.42	-2.26	0.91	0.997452
				10101	16,190,775 – 16,190,895	-	5	120	97.42	-1.74	0.91	0.971506
				10102	16,190,815 – 16,190,910	+	5	120	78.39	-2.27	0.73	0.982848
				10103	16,190,815 – 16,190,910	-	5	120	78.39	-1.86	0.87	0.961306
6198	3R_DroMel_CAF1	16,191,181 – 16,191,301	- - - - - - - - -	10104	16,191,181 – 16,191,301	+	5	120	93.08	-1.46	0.84	0.781127
6199	3R_DroMel_CAF1	16,191,337 – 16,191,456	- - - - - - - - -	10105	16,191,337 – 16,191,456	+	5	120	99.33	-1.25	0.96	0.545986
6199	3R_DroMel_CAF1	16,191,337 – 16,191,456	- - - - - - - - -	10106	16,191,337 – 16,191,456	-	5	120	99.33	-1.66	0.98	0.956527
6200	3R_DroMel_CAF1	16,192,054 – 16,192,371	- - - - - - - - -	10107	16,192,054 – 16,192,174	-	5	120	95.58	-1.16	0.90	0.562943
				10108	16,192,174 – 16,192,291	+	4	117	91.49	-2.50	0.80	0.930056
				10109	16,192,254 – 16,192,371	-	4	117	86.72	-1.52	0.71	0.566444
6201	3R_DroMel_CAF1	16,192,606 – 16,192,806	- - - - - - - - -	10110	16,192,606 – 16,192,726	+	5	120	86.26	-2.08	0.92	0.985972
				10111	16,192,606 – 16,192,726	-	5	120	86.26	-2.20	0.86	0.982370
				10112	16,192,646 – 16,192,766	+	5	120	97.50	-1.15	0.96	0.614902
				10113	16,192,646 – 16,192,766	-	5	120	97.50	-1.30	0.93	0.745653
				10114	16,192,686 – 16,192,806	-	5	120	99.33	-1.79	1.00	0.983841
6202	3R_DroMel_CAF1	16,193,133 – 16,193,292	- - - - - - - - -	10115	16,193,133 – 16,193,252	+	5	120	80.63	-1.76	0.65	0.662449
6202	3R_DroMel_CAF1	16,193,133 – 16,193,292	- - - - - - - - -	10116	16,193,172 – 16,193,292	+	4	120	99.58	-2.60	1.00	0.909621
6203	3R_DroMel_CAF1	16,193,332 – 16,193,490	- - - - - - - - -	10117	16,193,332 – 16,193,450	-	4	119	90.47	-1.70	0.81	0.734771
6203	3R_DroMel_CAF1	16,193,332 – 16,193,490	- - - - - - - - -	10118	16,193,371 – 16,193,490	+	4	119	99.58	-1.82	0.99	0.584772
6204	3R_DroMel_CAF1	16,197,213 – 16,197,333	- - - - - - - - -	10119	16,197,213 – 16,197,333	+	4	120	98.61	-3.36	0.98	0.960813
6204	3R_DroMel_CAF1	16,197,213 – 16,197,333	- - - - - - - - -	10120	16,197,213 – 16,197,333	-	4	120	98.61	-4.04	1.00	0.949692
6205	3R_DroMel_CAF1	16,197,506 – 16,197,604	- - - - - - - - -	10121	16,197,506 – 16,197,604	+	3	98	93.75	-1.69	0.95	0.737600
6206	3R_DroMel_CAF1	16,197,684 – 16,197,804	- - - - - - - - -	10122	16,197,684 – 16,197,804	+	4	120	93.89	-1.81	0.88	0.821032
6206	3R_DroMel_CAF1	16,197,684 – 16,197,804	- - - - - - - - -	10123	16,197,684 – 16,197,804	-	4	120	93.89	-2.52	0.92	0.984380
6207	3R_DroMel_CAF1	16,198,145 – 16,198,377	- - - - - - - - -	10124	16,198,145 – 16,198,265	+	4	120	97.64	-1.68	0.92	0.563092
6207	3R_DroMel_CAF1	16,198,145 – 16,198,377	- - - - - - - - -	10125	16,198,265 – 16,198,377	+	4	120	94.83	-2.07	0.86	0.853510
6208	3R_DroMel_CAF1	16,198,515 – 16,198,635	- - - - - - - - -	10126	16,198,515 – 16,198,635	-	4	120	89.00	-1.60	0.83	0.714367
6209	3R_DroMel_CAF1	16,198,785 – 16,198,985	- - - - - - - - -	10127	16,198,785 – 16,198,905	+	4	120	98.33	-2.53	1.00	0.955458
				10128	16,198,825 – 16,198,945	+	4	120	98.75	-2.36	0.96	0.894392
				10129	16,198,825 – 16,198,945	-	4	120	98.75	-2.77	0.99	0.952098
				10130	16,198,865 – 16,198,985	-	4	120	99.17	-2.58	0.99	0.926703
6210	3R_DroMel_CAF1	16,199,105 – 16,199,265	- - - - - - - - -	10131	16,199,105 – 16,199,225	+	4	120	92.36	-2.64	0.81	0.940577
6210	3R_DroMel_CAF1	16,199,105 – 16,199,265	- - - - - - - - -	10132	16,199,145 – 16,199,265	+	4	120	94.86	-3.92	0.88	0.962627
6211	3R_DroMel_CAF1	16,209,871 – 16,209,970	- - - - - - - - -	10133	16,209,871 – 16,209,970	+	6	102	83.18	-1.53	0.73	0.531751
6212	3R_DroMel_CAF1	16,211,369 – 16,211,486	- - - "knownCDS=Parent=FBtr0083898;Name=CG4342-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4342-RA" - - - - -	10134	16,211,369 – 16,211,486	+	6	117	95.09	-1.14	0.94	0.859356
6213	3R_DroMel_CAF1	16,213,693 – 16,213,791	- - - - - - - - -	10135	16,213,693 – 16,213,791	+	6	107	71.70	-2.09	0.43	0.922595
6214	3R_DroMel_CAF1	16,214,884 – 16,214,982	- - - - - - - - -	10136	16,214,884 – 16,214,982	+	5	98	96.53	-1.20	0.93	0.671732
6215	3R_DroMel_CAF1	16,214,983 – 16,215,171	- - - - - - - - -	10137	16,214,983 – 16,215,078	-	6	103	81.01	-1.63	0.69	0.716915
6215	3R_DroMel_CAF1	16,214,983 – 16,215,171	- - - - - - - - -	10138	16,215,078 – 16,215,171	-	6	103	74.08	-1.98	0.47	0.834434
6216	3R_DroMel_CAF1	16,220,438 – 16,220,529	- - - - - - - - -	10139	16,220,438 – 16,220,529	-	5	91	93.29	-1.37	0.95	0.939116
6217	3R_DroMel_CAF1	16,229,761 – 16,229,868	- - - - - - - - -	10140	16,229,761 – 16,229,868	+	6	120	78.65	-2.43	0.53	0.910979
6218	3R_DroMel_CAF1	16,249,025 – 16,249,119	- - - - - - - - -	10141	16,249,025 – 16,249,119	+	5	94	93.09	-1.57	0.85	0.896416
6219	3R_DroMel_CAF1	16,249,497 – 16,249,594	- - - - - - - - -	10142	16,249,497 – 16,249,594	-	6	107	76.35	-1.15	0.71	0.754040
6220	3R_DroMel_CAF1	16,252,589 – 16,252,720	- - - - - - - - -	10143	16,252,589 – 16,252,697	+	6	113	81.61	-1.71	0.74	0.743943
6220	3R_DroMel_CAF1	16,252,589 – 16,252,720	- - - - - - - - -	10144	16,252,626 – 16,252,720	+	6	116	80.84	-1.29	0.67	0.519474
6221	3R_DroMel_CAF1	16,256,591 – 16,256,755	- - - - - - - - -	10145	16,256,591 – 16,256,687	-	4	109	70.91	-2.11	0.56	0.979054
6221	3R_DroMel_CAF1	16,256,591 – 16,256,755	- - - - - - - - -	10146	16,256,660 – 16,256,755	-	5	103	70.11	-0.14	0.78	0.618521
6222	3R_DroMel_CAF1	16,261,606 – 16,261,722	- - - - - - - - -	10147	16,261,606 – 16,261,722	-	4	116	75.48	-1.68	0.60	0.568514
6223	3R_DroMel_CAF1	16,264,556 – 16,264,649	- - - - - - - - -	10148	16,264,556 – 16,264,649	+	6	95	81.16	-1.96	0.63	0.715761
6224	3R_DroMel_CAF1	16,265,233 – 16,265,329	- - - - - - - - -	10149	16,265,233 – 16,265,329	+	4	108	84.64	-2.16	0.78	0.928288
6225	3R_DroMel_CAF1	16,271,798 – 16,271,926	- - - - - - - - -	10150	16,271,798 – 16,271,898	+	5	104	90.35	-1.70	0.83	0.894024
6225	3R_DroMel_CAF1	16,271,798 – 16,271,926	- - - - - - - - -	10151	16,271,829 – 16,271,926	+	5	105	88.82	-1.65	0.83	0.826596
6226	3R_DroMel_CAF1	16,272,431 – 16,272,521	- - - - - - - - -	10152	16,272,431 – 16,272,521	+	6	102	71.80	-2.26	0.37	0.929159
6227	3R_DroMel_CAF1	16,273,025 – 16,273,129	- - - - - - - - -	10153	16,273,025 – 16,273,129	+	4	108	91.98	-1.91	0.86	0.886191
6228	3R_DroMel_CAF1	16,277,047 – 16,277,146	- - - - - - - - -	10154	16,277,047 – 16,277,146	-	5	99	95.35	-1.46	0.87	0.816149
6229	3R_DroMel_CAF1	16,279,946 – 16,280,106	- - - - - - - - -	10155	16,279,946 – 16,280,066	+	3	120	98.33	-1.81	0.93	0.681345
				10156	16,279,946 – 16,280,066	-	3	120	98.33	-1.92	0.96	0.809417
				10157	16,279,986 – 16,280,106	+	3	120	98.89	-1.78	0.95	0.725419
6230	3R_DroMel_CAF1	16,281,512 – 16,281,684	- - - - - - - - -	10158	16,281,512 – 16,281,604	+	3	120	78.31	-2.15	0.78	0.986397
				10159	16,281,512 – 16,281,604	-	3	120	78.31	-2.00	0.93	0.997700
				10160	16,281,588 – 16,281,684	-	3	120	81.55	-1.52	0.81	0.658064
6231	3R_DroMel_CAF1	16,282,373 – 16,282,569	- - - - - - - - -	10161	16,282,373 – 16,282,489	+	3	120	84.03	-1.76	0.80	0.657314
				10162	16,282,373 – 16,282,489	-	3	120	84.03	-2.08	0.75	0.769266
				10163	16,282,449 – 16,282,569	+	3	120	96.67	-1.88	0.95	0.799685
				10164	16,282,449 – 16,282,569	-	3	120	96.67	-2.03	0.93	0.812828
6232	3R_DroMel_CAF1	16,288,541 – 16,288,701	- - - - - - - - -	10165	16,288,541 – 16,288,661	-	3	120	98.33	-1.96	0.99	0.889988
6232	3R_DroMel_CAF1	16,288,541 – 16,288,701	- - - - - - - - -	10166	16,288,581 – 16,288,701	-	3	120	96.10	-1.31	1.00	0.525384
6233	3R_DroMel_CAF1	16,289,221 – 16,289,341	- - - - - - - - -	10167	16,289,221 – 16,289,341	+	3	120	97.77	-2.80	0.85	0.831333
6234	3R_DroMel_CAF1	16,289,381 – 16,289,541	- - - - - - - - -	10168	16,289,381 – 16,289,501	-	3	120	98.89	-1.86	1.00	0.868836
6234	3R_DroMel_CAF1	16,289,381 – 16,289,541	- - - - - - - - -	10169	16,289,421 – 16,289,541	-	3	120	99.44	-1.40	1.00	0.580851
6235	3R_DroMel_CAF1	16,289,661 – 16,289,779	- - - - - - - - -	10170	16,289,661 – 16,289,779	+	3	120	96.11	-1.63	0.93	0.558419
6235	3R_DroMel_CAF1	16,289,661 – 16,289,779	- - - - - - - - -	10171	16,289,661 – 16,289,779	-	3	120	96.11	-1.73	0.98	0.792012
6236	3R_DroMel_CAF1	16,290,802 – 16,290,922	- - - - - - - - -	10172	16,290,802 – 16,290,922	+	3	120	100.00	-1.52	1.00	0.676616
6236	3R_DroMel_CAF1	16,290,802 – 16,290,922	- - - - - - - - -	10173	16,290,802 – 16,290,922	-	3	120	100.00	-2.34	1.00	0.957987
6237	3R_DroMel_CAF1	16,291,002 – 16,291,162	- - - - - - - - -	10174	16,291,002 – 16,291,122	+	3	120	98.89	-2.21	0.97	0.917932
				10175	16,291,042 – 16,291,162	+	3	120	97.22	-1.51	0.96	0.560124
				10176	16,291,042 – 16,291,162	-	3	120	97.22	-2.13	0.96	0.897525
6238	3R_DroMel_CAF1	16,291,611 – 16,291,731	- - - - - - - - -	10177	16,291,611 – 16,291,731	+	3	120	99.44	-1.62	1.01	0.760182
6238	3R_DroMel_CAF1	16,291,611 – 16,291,731	- - - - - - - - -	10178	16,291,611 – 16,291,731	-	3	120	99.44	-1.39	0.97	0.500000
6239	3R_DroMel_CAF1	16,291,931 – 16,292,091	- - - - - - - - -	10179	16,291,931 – 16,292,051	+	3	120	100.00	-1.41	1.00	0.601552
				10180	16,291,931 – 16,292,051	-	3	120	100.00	-1.31	1.00	0.518764
				10181	16,291,971 – 16,292,091	+	3	120	98.33	-1.65	1.00	0.758144
6240	3R_DroMel_CAF1	16,293,048 – 16,293,168	- - - - - - - - -	10182	16,293,048 – 16,293,168	-	3	120	98.89	-1.78	1.00	0.835846
6241	3R_DroMel_CAF1	16,293,408 – 16,293,528	- - - - - - - - -	10183	16,293,408 – 16,293,528	-	3	120	97.78	-1.83	0.96	0.773243
6242	3R_DroMel_CAF1	16,293,764 – 16,293,880	- - - - - - - - -	10184	16,293,764 – 16,293,880	+	3	120	94.72	-1.81	0.97	0.834386
6243	3R_DroMel_CAF1	16,294,697 – 16,294,817	- - - - - - - - -	10185	16,294,697 – 16,294,817	-	3	120	97.22	-1.78	0.93	0.643801
6244	3R_DroMel_CAF1	16,296,023 – 16,296,143	- - - - - - - - -	10186	16,296,023 – 16,296,143	+	3	120	96.67	-1.73	0.93	0.631372
6245	3R_DroMel_CAF1	16,296,364 – 16,296,484	- - - - - - - - -	10187	16,296,364 – 16,296,484	-	3	120	97.22	-2.55	0.86	0.808077
6246	3R_DroMel_CAF1	16,296,764 – 16,296,922	- - - - - - - - -	10188	16,296,764 – 16,296,882	+	3	120	95.00	-1.39	0.98	0.542296
				10189	16,296,764 – 16,296,882	-	3	120	95.00	-2.22	0.92	0.885979
				10190	16,296,802 – 16,296,922	+	3	120	96.11	-2.51	0.99	0.979187
				10191	16,296,802 – 16,296,922	-	3	120	96.11	-2.45	0.94	0.943515
6247	3R_DroMel_CAF1	16,297,747 – 16,297,866	- - - - - - - - -	10192	16,297,747 – 16,297,866	-	3	120	96.94	-1.96	0.90	0.681597
6248	3R_DroMel_CAF1	16,298,526 – 16,298,646	- - - - - - - - -	10193	16,298,526 – 16,298,646	+	3	120	98.89	-2.25	0.96	0.920230
6249	3R_DroMel_CAF1	16,298,800 – 16,298,956	- - - - - - - - -	10194	16,298,800 – 16,298,916	+	3	120	97.22	-2.33	0.95	0.931960
6249	3R_DroMel_CAF1	16,298,800 – 16,298,956	- - - - - - - - -	10195	16,298,837 – 16,298,956	+	3	120	95.56	-2.94	0.96	0.985852
6250	3R_DroMel_CAF1	16,305,367 – 16,305,467	- - - - - - - - -	10196	16,305,367 – 16,305,467	+	4	104	85.23	-1.96	0.90	0.940626
6251	3R_DroMel_CAF1	16,306,085 – 16,306,223	- - - - - - - - -	10197	16,306,085 – 16,306,183	+	5	113	75.61	-2.46	0.48	0.989857
6251	3R_DroMel_CAF1	16,306,085 – 16,306,223	- - - - - - - - -	10198	16,306,115 – 16,306,223	+	5	120	76.42	-1.70	0.55	0.553544
6252	3R_DroMel_CAF1	16,307,491 – 16,307,583	- - - - - - - - -	10199	16,307,491 – 16,307,583	+	5	96	91.64	-1.20	0.87	0.519764
6252	3R_DroMel_CAF1	16,307,491 – 16,307,583	- - - - - - - - -	10200	16,307,491 – 16,307,583	-	5	96	91.64	-1.92	0.91	0.995394
6253	3R_DroMel_CAF1	16,307,716 – 16,307,810	- - - - - - - - -	10201	16,307,716 – 16,307,810	-	6	97	77.94	-2.04	0.47	0.577288
6254	3R_DroMel_CAF1	16,310,925 – 16,311,036	- - - - - - - - -	10202	16,310,925 – 16,311,036	-	6	114	79.40	-1.78	0.67	0.844772
6255	3R_DroMel_CAF1	16,313,674 – 16,313,774	- - - - - - - - -	10203	16,313,674 – 16,313,774	+	5	109	82.97	-2.12	0.61	0.726049
6256	3R_DroMel_CAF1	16,314,545 – 16,314,644	- - - - - - - - -	10204	16,314,545 – 16,314,644	-	5	100	96.08	-1.48	0.90	0.904545
6257	3R_DroMel_CAF1	16,316,770 – 16,316,867	- - - - - - - - -	10205	16,316,770 – 16,316,867	+	6	103	76.04	-2.13	0.57	0.947966
6258	3R_DroMel_CAF1	16,328,961 – 16,329,057	- - - - - - - - -	10206	16,328,961 – 16,329,057	-	5	96	94.38	-2.63	0.74	0.782266
6259	3R_DroMel_CAF1	16,329,527 – 16,329,658	- - - - - - - - -	10207	16,329,527 – 16,329,618	+	6	91	79.14	-2.66	0.43	0.810570
				10208	16,329,527 – 16,329,618	-	6	91	79.14	-1.85	0.53	0.555094
				10209	16,329,547 – 16,329,658	+	5	111	90.17	-1.69	0.75	0.632043
				10210	16,329,547 – 16,329,658	-	5	111	90.17	-1.56	0.86	0.867972
6260	3R_DroMel_CAF1	16,330,357 – 16,330,475	- - - - - - - - -	10211	16,330,357 – 16,330,475	+	5	120	91.83	-1.28	0.90	0.735399
6261	3R_DroMel_CAF1	16,330,875 – 16,331,035	- - - "knownCDS=Parent=FBtr0083887;Name=Or92a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17916-RA" - - - - -	10212	16,330,875 – 16,330,995	+	5	120	93.42	-2.00	0.86	0.989267
				10213	16,330,875 – 16,330,995	-	5	120	93.42	-2.27	0.91	0.999314
				10214	16,330,915 – 16,331,035	-	5	120	95.58	-1.57	0.91	0.958998
6262	3R_DroMel_CAF1	16,331,426 – 16,331,614	- - - "knownCDS=Parent=FBtr0083887;Name=Or92a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17916-RA" - - - - -	10215	16,331,426 – 16,331,545	+	5	119	93.87	-1.38	0.88	0.815727
6262	3R_DroMel_CAF1	16,331,426 – 16,331,614		10216	16,331,505 – 16,331,614	+	5	109	93.58	-1.71	0.98	0.997152
6263	3R_DroMel_CAF1	16,331,765 – 16,331,885	- - - "knownCDS=Parent=FBtr0083887;Name=Or92a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17916-RA" - - - - -	10217	16,331,765 – 16,331,885	-	5	120	98.42	-1.35	0.98	0.843795
6264	3R_DroMel_CAF1	16,333,525 – 16,333,643	- - - "knownCDS=Parent=FBtr0083888, FBtr0083889;Name=CG4288-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4288-RB, FlyBase+Annotation+IDs:CG4288-RA" - - - - -	10218	16,333,525 – 16,333,643	-	6	120	78.97	-1.73	0.64	0.803141
6265	3R_DroMel_CAF1	16,334,278 – 16,334,395	- - - "knownCDS=Parent=FBtr0083888, FBtr0083889;Name=CG4288-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4288-RB, FlyBase+Annotation+IDs:CG4288-RA" - - - - -	10219	16,334,278 – 16,334,395	-	6	120	78.81	-2.23	0.60	0.921086
6266	3R_DroMel_CAF1	16,336,389 – 16,336,479	- - - - - - - - -	10220	16,336,389 – 16,336,479	+	6	98	81.71	-2.19	0.54	0.530077
6266	3R_DroMel_CAF1	16,336,389 – 16,336,479	- - - - - - - - -	10221	16,336,389 – 16,336,479	-	6	98	81.71	-2.60	0.79	0.929276
6267	3R_DroMel_CAF1	16,348,485 – 16,348,578	- - - - - - - - -	10222	16,348,485 – 16,348,578	+	5	93	94.41	-1.99	0.82	0.940348
6267	3R_DroMel_CAF1	16,348,485 – 16,348,578	- - - - - - - - -	10223	16,348,485 – 16,348,578	-	5	93	94.41	-1.90	0.86	0.981699
6268	3R_DroMel_CAF1	16,351,267 – 16,351,364	- - - - - - - - -	10224	16,351,267 – 16,351,364	-	5	102	83.90	-2.84	0.85	0.997082
6269	3R_DroMel_CAF1	16,353,165 – 16,353,267	- - - - - - - - -	10225	16,353,165 – 16,353,267	-	4	102	81.44	-2.58	0.62	0.958070
6270	3R_DroMel_CAF1	16,368,387 – 16,368,484	- - - - - - - - -	10226	16,368,387 – 16,368,484	+	5	97	91.65	-1.98	0.89	0.994811
6271	3R_DroMel_CAF1	16,376,429 – 16,376,520	- - - - - - - - -	10227	16,376,429 – 16,376,520	-	6	99	83.46	-1.75	0.69	0.524498
6272	3R_DroMel_CAF1	16,377,580 – 16,377,682	- - - - - - - - -	10228	16,377,580 – 16,377,682	-	5	103	89.16	-1.38	0.81	0.538090
6273	3R_DroMel_CAF1	16,379,939 – 16,380,154	- - - "knownCDS=Parent=FBtr0090034;Name=att-ORFB-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33488-RA" - - - - -	10229	16,379,939 – 16,380,038	+	3	99	95.29	-2.65	0.95	0.972549
				10230	16,379,968 – 16,380,078	+	3	110	95.76	-1.66	0.99	0.786691
				10231	16,379,998 – 16,380,118	+	3	120	96.11	-2.81	0.89	0.931661
				10232	16,380,038 – 16,380,154	-	3	116	95.40	-2.47	0.92	0.931553
6274	3R_DroMel_CAF1	16,383,451 – 16,383,551	- - - - - - - - -	10233	16,383,451 – 16,383,551	-	4	120	68.03	-1.47	0.53	0.579540
6275	3R_DroMel_CAF1	16,385,678 – 16,385,781	- - - "knownCDS=Parent=FBtr0083951;Name=CG15922-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15922-RA" - - - - -	10234	16,385,678 – 16,385,781	+	6	112	76.96	-1.43	0.59	0.538643
6276	3R_DroMel_CAF1	16,385,863 – 16,385,973	- - - - - - - - -	10235	16,385,863 – 16,385,973	+	5	110	88.08	-2.25	0.75	0.908259
6277	3R_DroMel_CAF1	16,386,013 – 16,386,110	- - - - - - - - -	10236	16,386,013 – 16,386,110	-	5	97	90.52	-2.89	0.80	0.995829
6278	3R_DroMel_CAF1	16,388,353 – 16,388,473	- - - "knownCDS=Parent=FBtr0083950;Name=CG10877-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10877-RA" - - - - -	10237	16,388,353 – 16,388,473	+	4	120	88.61	-1.70	0.67	0.524198
6278	3R_DroMel_CAF1	16,388,353 – 16,388,473		10238	16,388,353 – 16,388,473	-	4	120	88.61	-2.02	0.79	0.875040
6279	3R_DroMel_CAF1	16,389,703 – 16,389,823	- - - - - - - - -	10239	16,389,703 – 16,389,823	+	3	120	95.28	-2.03	0.97	0.911180
6279	3R_DroMel_CAF1	16,389,703 – 16,389,823	- - - - - - - - -	10240	16,389,703 – 16,389,823	-	3	120	95.28	-1.82	0.95	0.779957
6280	3R_DroMel_CAF1	16,389,903 – 16,390,023	- - - - - - - - -	10241	16,389,903 – 16,390,023	+	3	120	79.26	-1.74	0.65	0.694349
6280	3R_DroMel_CAF1	16,389,903 – 16,390,023	- - - - - - - - -	10242	16,389,903 – 16,390,023	-	3	120	79.26	-1.80	0.60	0.500000
6281	3R_DroMel_CAF1	16,391,769 – 16,392,008	- - - - - - - - -	10243	16,391,769 – 16,391,889	-	3	120	96.67	-2.22	0.88	0.748718
				10244	16,391,809 – 16,391,929	-	3	120	97.78	-2.29	0.96	0.930477
				10245	16,391,849 – 16,391,969	-	3	120	98.33	-2.02	1.01	0.927051
				10246	16,391,889 – 16,392,008	-	3	120	93.04	-1.66	0.94	0.677172
6282	3R_DroMel_CAF1	16,393,147 – 16,393,251	- - - - - - - - -	10247	16,393,147 – 16,393,251	-	3	116	82.70	-1.74	0.75	0.650698
6283	3R_DroMel_CAF1	16,395,215 – 16,395,317	- - - - - - - - -	10248	16,395,215 – 16,395,317	+	3	106	82.32	-2.71	0.64	0.923881
6284	3R_DroMel_CAF1	16,398,795 – 16,398,986	- - - - - - - - -	10249	16,398,795 – 16,398,908	-	5	113	83.92	-2.61	0.70	0.960841
6284	3R_DroMel_CAF1	16,398,795 – 16,398,986	- - - - - - - - -	10250	16,398,873 – 16,398,986	-	5	113	97.96	-1.94	0.98	0.997383
6285	3R_DroMel_CAF1	16,399,404 – 16,399,507	- - - - - - - - -	10251	16,399,404 – 16,399,507	-	5	111	91.33	-1.60	0.86	0.915791
6286	3R_DroMel_CAF1	16,400,618 – 16,400,806	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002579;Name=psi18s-301;Dbxref=FB:FBgn0083039 ,GB:AJ809590" - - - - - - - -	10252	16,400,618 – 16,400,731	+	6	119	82.31	-1.28	0.77	0.516929
6286	3R_DroMel_CAF1	16,400,618 – 16,400,806		10253	16,400,692 – 16,400,806	+	6	120	73.38	-3.13	0.51	0.998512
6287	3R_DroMel_CAF1	16,405,534 – 16,405,672	- - - - - - - - -	10254	16,405,534 – 16,405,637	-	5	103	92.52	-1.75	0.84	0.942337
6287	3R_DroMel_CAF1	16,405,534 – 16,405,672	- - - - - - - - -	10255	16,405,559 – 16,405,672	+	5	113	88.94	-1.69	0.71	0.511116
6288	3R_DroMel_CAF1	16,406,954 – 16,407,053	- - - "knownCDS=Parent=FBtr0100063;Name=CG34008-cds, ;Dbxref=FlyBase+Annotation+IDs:CG34008-RA" - - - - -	10256	16,406,954 – 16,407,053	-	6	108	70.52	-1.96	0.44	0.886540
6289	3R_DroMel_CAF1	16,408,580 – 16,408,676	- - - - - - - - -	10257	16,408,580 – 16,408,676	-	6	98	79.71	-1.70	0.72	0.848923
6290	3R_DroMel_CAF1	16,409,745 – 16,409,886	- - - "knownCDS=Parent=FBtr0083946;Name=CG16953-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16953-RA" - - - - -	10258	16,409,745 – 16,409,859	+	6	114	82.57	-2.08	0.72	0.762271
				10259	16,409,745 – 16,409,859	-	6	114	82.57	-2.34	0.74	0.835765
				10260	16,409,785 – 16,409,886	+	6	102	79.14	-2.40	0.54	0.897062
				10261	16,409,785 – 16,409,886	-	6	102	79.14	-2.01	0.67	0.912634
6291	3R_DroMel_CAF1	16,414,539 – 16,414,658	- - - "knownCDS=Parent=FBtr0083911;Name=CG5434-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5434-RA" - - - - -	10262	16,414,539 – 16,414,658	+	6	120	77.26	-1.75	0.63	0.871166
6292	3R_DroMel_CAF1	16,424,514 – 16,424,630	- - - - - - - - -	10263	16,424,514 – 16,424,630	+	5	120	81.48	-1.70	0.64	0.555238
6292	3R_DroMel_CAF1	16,424,514 – 16,424,630	- - - - - - - - -	10264	16,424,514 – 16,424,630	-	5	120	81.48	-1.81	0.65	0.671828
6293	3R_DroMel_CAF1	16,430,429 – 16,430,585	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000247;Name=Dmel_Leu_TAA_14000247;TFAMID=DmelLTAA-16430554" "tRNAscan=type:Leu:anticodon:TAA f:16430470_t:16430594_strand=-_cove=70.06" - - "Rfam=AE003746.3/81114-81197_RF00005;tRNA;\|2e-39" - - - "Flybase=FBgn0051506:CR31506:cytosolic_tRNA_gene\|1e-43"	10265	16,430,429 – 16,430,548	+	5	120	93.04	-1.35	0.95	0.929906
				10266	16,430,429 – 16,430,548	-	5	120	93.04	-1.70	0.90	0.979133
				10267	16,430,468 – 16,430,585	+	5	117	97.43	-1.93	0.97	0.997192
				10268	16,430,468 – 16,430,585	-	5	117	97.43	-2.96	0.98	0.999954
6294	3R_DroMel_CAF1	16,433,876 – 16,434,030	- - - "knownCDS=Parent=FBtr0083912;Name=bon-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5206-RA" - - - - -	10269	16,433,876 – 16,433,993	+	6	117	81.42	-1.59	0.62	0.507486
6294	3R_DroMel_CAF1	16,433,876 – 16,434,030		10270	16,433,916 – 16,434,030	-	6	114	78.95	-1.91	0.51	0.537198
6295	3R_DroMel_CAF1	16,434,697 – 16,434,788	- - - "knownCDS=Parent=FBtr0083912;Name=bon-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5206-RA" - - - - -	10271	16,434,697 – 16,434,788	+	6	94	90.07	-2.23	0.87	0.946287
6296	3R_DroMel_CAF1	16,440,004 – 16,440,124	- - - "knownCDS=Parent=FBtr0083942;Name=CG15923-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15923-RA" - - - - -	10272	16,440,004 – 16,440,124	+	6	120	80.06	-1.61	0.64	0.661295
6297	3R_DroMel_CAF1	16,440,490 – 16,440,648	- - - "knownCDS=Parent=FBtr0083942;Name=CG15923-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15923-RA" - - - - -	10273	16,440,490 – 16,440,609	+	6	119	81.83	-1.73	0.77	0.764858
6297	3R_DroMel_CAF1	16,440,490 – 16,440,648		10274	16,440,529 – 16,440,648	+	6	120	75.42	-1.93	0.46	0.662955
6298	3R_DroMel_CAF1	16,445,070 – 16,445,181	- - - "knownCDS=Parent=FBtr0083913;Name=CG5466-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5466-RA" - - - - -	10275	16,445,070 – 16,445,181	+	6	120	77.43	-2.49	0.58	0.973971
6299	3R_DroMel_CAF1	16,447,535 – 16,447,720	- - - - - - - - -	10276	16,447,535 – 16,447,648	+	5	120	79.10	-1.91	0.57	0.711336
				10277	16,447,569 – 16,447,686	-	5	118	89.49	-1.37	0.80	0.520549
				10278	16,447,608 – 16,447,720	-	5	112	96.25	-1.59	0.87	0.899022
6300	3R_DroMel_CAF1	16,448,830 – 16,448,925	- - - "knownCDS=Parent=FBtr0083917;Name=H-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5460-RC" - - - - -	10279	16,448,830 – 16,448,925	-	6	108	79.13	-1.39	0.62	0.512733
6301	3R_DroMel_CAF1	16,450,043 – 16,450,146	- - - "knownCDS=Parent=FBtr0083916;Name=H-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5460-RD" - - - - -	10280	16,450,043 – 16,450,146	+	6	106	80.64	-2.16	0.58	0.749730
6302	3R_DroMel_CAF1	16,450,208 – 16,450,310	- - - "knownCDS=Parent=FBtr0083916;Name=H-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5460-RD" - - - - -	10281	16,450,208 – 16,450,310	+	6	105	76.05	-3.05	0.52	0.995476
6302	3R_DroMel_CAF1	16,450,208 – 16,450,310		10282	16,450,208 – 16,450,310	-	6	105	76.05	-2.00	0.43	0.563476
6303	3R_DroMel_CAF1	16,451,912 – 16,452,023	- - - "knownCDS=Parent=FBtr0083916;Name=H-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5460-RD" - - - - -	10283	16,451,912 – 16,452,023	+	6	114	67.62	-3.11	0.38	0.998171
6303	3R_DroMel_CAF1	16,451,912 – 16,452,023		10284	16,451,912 – 16,452,023	-	6	114	67.62	-2.94	0.40	0.997704
6304	3R_DroMel_CAF1	16,456,681 – 16,456,801	- - - "knownCDS=Parent=FBtr0083940, FBtr0083941;Name=Pi3K92E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4141-RA, FlyBase+Annotation+IDs:CG4141-RB" - - - - -	10285	16,456,681 – 16,456,801	-	6	120	76.06	-2.43	0.40	0.873491
6305	3R_DroMel_CAF1	16,460,689 – 16,460,780	- - - - - - - - -	10286	16,460,689 – 16,460,780	-	5	94	68.86	-2.25	0.52	0.991194
6306	3R_DroMel_CAF1	16,465,521 – 16,465,637	- - - "knownCDS=Parent=FBtr0083918;Name=CG5483-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5483-RA" - - - - -	10287	16,465,521 – 16,465,637	-	6	120	76.88	-1.73	0.51	0.500000
6307	3R_DroMel_CAF1	16,479,238 – 16,479,336	- - - - - - - - -	10288	16,479,238 – 16,479,336	+	6	116	65.80	-1.78	0.50	0.923522
6307	3R_DroMel_CAF1	16,479,238 – 16,479,336	- - - - - - - - -	10289	16,479,238 – 16,479,336	-	6	116	65.80	-1.25	0.59	0.691384
6308	3R_DroMel_CAF1	16,483,275 – 16,483,366	- - - - - - - - -	10290	16,483,275 – 16,483,366	-	5	99	85.66	-1.76	0.82	0.799182
6309	3R_DroMel_CAF1	16,485,086 – 16,485,222	- - - - - - - - -	10291	16,485,086 – 16,485,200	+	5	115	67.11	-2.39	0.27	0.935474
				10292	16,485,086 – 16,485,200	-	5	115	67.11	-2.09	0.19	0.564422
				10293	16,485,121 – 16,485,222	+	5	102	67.86	-2.89	0.40	0.998835
				10294	16,485,121 – 16,485,222	-	5	102	67.86	-2.45	0.36	0.988464
6310	3R_DroMel_CAF1	16,486,920 – 16,487,015	- - - - - - - - -	10295	16,486,920 – 16,487,015	-	6	118	73.36	-0.69	0.73	0.520778
6311	3R_DroMel_CAF1	16,493,478 – 16,493,573	- - - - - - - - -	10296	16,493,478 – 16,493,573	+	5	110	83.32	-1.94	0.76	0.843464
6311	3R_DroMel_CAF1	16,493,478 – 16,493,573	- - - - - - - - -	10297	16,493,478 – 16,493,573	-	5	110	83.32	-2.68	0.67	0.962138
6312	3R_DroMel_CAF1	16,496,125 – 16,496,221	- - - - - - - - -	10298	16,496,125 – 16,496,221	+	6	103	90.92	-2.25	0.89	0.985501
6313	3R_DroMel_CAF1	16,498,229 – 16,498,323	- - - - - - - - -	10299	16,498,229 – 16,498,323	-	6	99	74.01	-1.69	0.55	0.789176
6314	3R_DroMel_CAF1	16,499,157 – 16,499,258	- - - - - - - - -	10300	16,499,157 – 16,499,258	-	4	108	87.60	-2.09	0.84	0.932706
6315	3R_DroMel_CAF1	16,499,460 – 16,499,553	- - - - - - - - -	10301	16,499,460 – 16,499,553	+	4	93	89.43	-1.44	0.77	0.530786
6315	3R_DroMel_CAF1	16,499,460 – 16,499,553	- - - - - - - - -	10302	16,499,460 – 16,499,553	-	4	93	89.43	-1.57	0.87	0.740503
6316	3R_DroMel_CAF1	16,500,287 – 16,500,393	- - - - - - - - -	10303	16,500,287 – 16,500,393	-	6	109	73.37	-1.84	0.43	0.606540
6317	3R_DroMel_CAF1	16,501,076 – 16,501,216	- - - - - - - - -	10304	16,501,076 – 16,501,195	+	4	120	94.00	-1.91	0.84	0.783781
6317	3R_DroMel_CAF1	16,501,076 – 16,501,216	- - - - - - - - -	10305	16,501,115 – 16,501,216	+	4	101	94.55	-1.92	0.89	0.869119
6318	3R_DroMel_CAF1	16,502,692 – 16,502,862	- - - "knownCDS=Parent=FBtr0083935;Name=CG4000-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4000-RA" - - - - -	10306	16,502,692 – 16,502,788	+	6	96	79.72	-2.03	0.69	0.904800
				10307	16,502,692 – 16,502,788	-	6	96	79.72	-1.59	0.76	0.837169
				10308	16,502,748 – 16,502,862	+	6	120	73.30	-2.06	0.41	0.800249
6319	3R_DroMel_CAF1	16,506,743 – 16,506,844	- - - - - - - - -	10309	16,506,743 – 16,506,844	+	4	115	73.37	-1.84	0.55	0.709552
6320	3R_DroMel_CAF1	16,515,580 – 16,515,689	- - - - - - - - -	10310	16,515,580 – 16,515,689	+	6	115	76.93	-1.84	0.59	0.855761
6320	3R_DroMel_CAF1	16,515,580 – 16,515,689	- - - - - - - - -	10311	16,515,580 – 16,515,689	-	6	115	76.93	-2.37	0.60	0.974632
6321	3R_DroMel_CAF1	16,515,831 – 16,515,939	- - - - - - - - -	10312	16,515,831 – 16,515,939	-	6	120	82.17	-1.50	0.72	0.593949
6322	3R_DroMel_CAF1	16,517,533 – 16,517,653	- - - - - - - - -	10313	16,517,533 – 16,517,653	+	5	120	88.38	-1.97	0.69	0.583948
6323	3R_DroMel_CAF1	16,521,234 – 16,521,363	- - - - - - - - -	10314	16,521,234 – 16,521,334	+	5	100	92.59	-1.74	0.90	0.984728
6323	3R_DroMel_CAF1	16,521,234 – 16,521,363	- - - - - - - - -	10315	16,521,256 – 16,521,363	+	6	107	84.80	-2.26	0.81	0.822787
6324	3R_DroMel_CAF1	16,522,006 – 16,522,101	- - - - - - - - -	10316	16,522,006 – 16,522,101	-	6	114	71.63	-1.53	0.50	0.500000
6325	3R_DroMel_CAF1	16,530,439 – 16,530,541	- - - - - - - - -	10317	16,530,439 – 16,530,541	+	6	103	81.50	-1.83	0.61	0.591889
6326	3R_DroMel_CAF1	16,530,848 – 16,530,949	- - - - - - - - -	10318	16,530,848 – 16,530,949	-	5	107	90.14	-2.00	0.80	0.931555
6327	3R_DroMel_CAF1	16,543,190 – 16,543,280	- - - - - - - - -	10319	16,543,190 – 16,543,280	+	4	91	94.14	-1.68	0.86	0.680045
6328	3R_DroMel_CAF1	16,552,153 – 16,552,243	- - - - - - - - -	10320	16,552,153 – 16,552,243	-	6	107	82.87	-1.43	0.84	0.602470
6329	3R_DroMel_CAF1	16,553,278 – 16,553,377	- - - - - - - - -	10321	16,553,278 – 16,553,377	+	6	104	77.96	-2.58	0.54	0.964114
6330	3R_DroMel_CAF1	16,569,495 – 16,569,592	- - - - - - - - -	10322	16,569,495 – 16,569,592	+	5	100	86.36	-1.79	0.74	0.701124
6331	3R_DroMel_CAF1	16,573,069 – 16,573,164	- - - "knownCDS=Parent=FBtr0083923, FBtr0083924, FBtr0083925, FBtr0083926;Name=CG31203-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31203-RA, FlyBase+Annotation+IDs:CG31203-RD, FlyBase+Annotation+IDs:CG31203-RE, FlyBase+Annotation+IDs:CG31203-RB" - - - - -	10323	16,573,069 – 16,573,164	+	6	102	77.39	-1.40	0.76	0.880860
6331	3R_DroMel_CAF1	16,573,069 – 16,573,164		10324	16,573,069 – 16,573,164	-	6	102	77.39	-1.07	0.68	0.539682
6332	3R_DroMel_CAF1	16,573,968 – 16,574,112	- - - "knownCDS=Parent=FBtr0083928;Name=Pros28.1A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17268-RA" - - - - -	10325	16,573,968 – 16,574,072	-	5	120	75.09	-2.05	0.55	0.934823
6332	3R_DroMel_CAF1	16,573,968 – 16,574,112		10326	16,573,998 – 16,574,112	-	5	120	87.25	-1.92	0.74	0.762313
6333	3R_DroMel_CAF1	16,574,552 – 16,574,712	- - - "knownCDS=Parent=FBtr0083928;Name=Pros28.1A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17268-RA" - - - - -	10327	16,574,552 – 16,574,672	-	5	120	92.75	-1.31	0.84	0.622266
				10328	16,574,592 – 16,574,712	+	5	120	96.33	-2.78	0.92	0.999816
				10329	16,574,592 – 16,574,712	-	5	120	96.33	-2.55	0.96	0.999891
6334	3R_DroMel_CAF1	16,575,033 – 16,575,131	- - - - - - - - -	10330	16,575,033 – 16,575,131	+	6	98	78.58	-1.49	0.88	0.880307
6335	3R_DroMel_CAF1	16,578,793 – 16,578,910	- - - - - - - - -	10331	16,578,793 – 16,578,910	+	5	120	92.05	-3.79	0.85	0.999775
6335	3R_DroMel_CAF1	16,578,793 – 16,578,910	- - - - - - - - -	10332	16,578,793 – 16,578,910	-	5	120	92.05	-3.27	0.91	0.999964
6336	3R_DroMel_CAF1	16,579,678 – 16,579,770	- - - - - - - - -	10333	16,579,678 – 16,579,770	+	6	120	78.69	-1.97	0.63	0.892712
6337	3R_DroMel_CAF1	16,585,083 – 16,585,179	- - - "knownCDS=Parent=FBtr0083997;Name=CG31195-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31195-RA" - - - - -	10334	16,585,083 – 16,585,179	+	6	120	78.68	-1.38	0.64	0.614367
6338	3R_DroMel_CAF1	16,587,779 – 16,587,881	- - - "knownCDS=Parent=FBtr0083997;Name=CG31195-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31195-RA" - - - - -	10335	16,587,779 – 16,587,881	+	6	114	79.32	-2.01	0.58	0.790599
6338	3R_DroMel_CAF1	16,587,779 – 16,587,881		10336	16,587,779 – 16,587,881	-	6	114	79.32	-1.67	0.71	0.850149
6339	3R_DroMel_CAF1	16,592,357 – 16,592,507	- - - - - - - - -	10337	16,592,357 – 16,592,447	+	6	90	78.96	-1.68	0.59	0.636023
				10338	16,592,357 – 16,592,447	-	6	90	78.96	-1.23	0.75	0.719562
				10339	16,592,415 – 16,592,507	+	6	94	79.75	-2.73	0.54	0.933096
				10340	16,592,415 – 16,592,507	-	6	94	79.75	-2.17	0.59	0.846596
6340	3R_DroMel_CAF1	16,592,816 – 16,592,963	- - - - - - - - -	10341	16,592,816 – 16,592,925	-	6	114	79.53	-1.77	0.62	0.762066
				10342	16,592,855 – 16,592,963	+	5	110	76.66	-1.45	0.66	0.569726
				10343	16,592,855 – 16,592,963	-	5	110	76.66	-2.29	0.65	0.986140
6341	3R_DroMel_CAF1	16,593,804 – 16,593,900	- - - - - - - - -	10344	16,593,804 – 16,593,900	+	6	108	79.59	-2.80	0.73	0.966635
6341	3R_DroMel_CAF1	16,593,804 – 16,593,900	- - - - - - - - -	10345	16,593,804 – 16,593,900	-	6	108	79.59	-2.57	0.68	0.956511
6342	3R_DroMel_CAF1	16,598,494 – 16,598,588	- - - "knownCDS=Parent=FBtr0083958;Name=CG17838-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17838-RA" - - - - -	10346	16,598,494 – 16,598,588	-	6	97	84.37	-2.12	0.68	0.500000
6343	3R_DroMel_CAF1	16,600,082 – 16,600,213	- - - - - - - - -	10347	16,600,082 – 16,600,173	+	5	97	88.32	-1.60	0.81	0.737969
6343	3R_DroMel_CAF1	16,600,082 – 16,600,213	- - - - - - - - -	10348	16,600,110 – 16,600,213	+	6	106	88.27	-2.76	0.76	0.579498
6344	3R_DroMel_CAF1	16,604,658 – 16,604,750	- - - - - - - - -	10349	16,604,658 – 16,604,750	+	6	112	77.23	-0.89	0.82	0.669857
6345	3R_DroMel_CAF1	16,607,870 – 16,607,960	- - - - - - - - -	10350	16,607,870 – 16,607,960	+	5	94	84.54	-2.35	0.61	0.723019
6346	3R_DroMel_CAF1	16,608,732 – 16,608,869	- - - - - - - - -	10351	16,608,732 – 16,608,832	-	3	103	90.20	-2.12	0.89	0.842540
6346	3R_DroMel_CAF1	16,608,732 – 16,608,869	- - - - - - - - -	10352	16,608,766 – 16,608,869	-	3	103	94.82	-2.40	0.96	0.962266
6347	3R_DroMel_CAF1	16,614,672 – 16,614,764	- - - - - - - - -	10353	16,614,672 – 16,614,764	-	6	100	78.93	-2.57	0.60	0.957833
6348	3R_DroMel_CAF1	16,617,200 – 16,617,299	- - - - - - - - -	10354	16,617,200 – 16,617,299	+	6	106	74.31	-2.58	0.44	0.983848
6349	3R_DroMel_CAF1	16,619,664 – 16,619,754	- - - - - - - - -	10355	16,619,664 – 16,619,754	+	6	91	76.90	-2.07	0.58	0.927361
6350	3R_DroMel_CAF1	16,624,198 – 16,624,297	- - - - - - - - -	10356	16,624,198 – 16,624,297	+	6	104	69.96	-1.56	0.57	0.858457
6350	3R_DroMel_CAF1	16,624,198 – 16,624,297	- - - - - - - - -	10357	16,624,198 – 16,624,297	-	6	104	69.96	-2.39	0.83	0.989008
6351	3R_DroMel_CAF1	16,640,881 – 16,640,981	- - - - - - - - -	10358	16,640,881 – 16,640,981	-	6	110	71.33	-1.59	0.59	0.874372
6352	3R_DroMel_CAF1	16,646,713 – 16,646,830	- - - - - - - - -	10359	16,646,713 – 16,646,830	-	5	120	78.87	-1.32	0.77	0.574206
6353	3R_DroMel_CAF1	16,647,803 – 16,647,895	- - - - - - - - -	10360	16,647,803 – 16,647,895	-	5	107	77.95	-1.43	0.69	0.553081
6354	3R_DroMel_CAF1	16,648,311 – 16,648,476	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002580;Name=psi18s-1295;Dbxref=FB:FBgn0083055 ,GB:AJ809580" - "RNAmicro=f:16648378_t:16648477_strand:+_p:0.926552" - - - - - -	10361	16,648,311 – 16,648,416	+	6	113	79.31	-1.15	0.73	0.619457
				10362	16,648,341 – 16,648,448	+	6	111	75.81	-1.43	0.87	0.943595
				10363	16,648,378 – 16,648,476	+	6	100	80.85	-4.39	0.87	0.969637
				10364	16,648,378 – 16,648,476	-	6	100	80.85	-3.09	0.87	0.972765
6355	3R_DroMel_CAF1	16,648,557 – 16,648,732	- - - - - - - - -	10365	16,648,557 – 16,648,662	+	6	111	77.27	-1.63	0.69	0.902803
6355	3R_DroMel_CAF1	16,648,557 – 16,648,732	- - - - - - - - -	10366	16,648,631 – 16,648,732	+	6	108	74.28	-2.40	0.77	0.990636
6356	3R_DroMel_CAF1	16,654,325 – 16,654,443	- - - - - - - - -	10367	16,654,325 – 16,654,443	-	6	118	74.56	-2.36	0.45	0.958362
6357	3R_DroMel_CAF1	16,660,613 – 16,660,722	- - - - - - - - -	10368	16,660,613 – 16,660,722	-	5	110	90.85	-1.58	0.83	0.825556
6358	3R_DroMel_CAF1	16,661,185 – 16,661,303	- - - - - - - - -	10369	16,661,185 – 16,661,303	+	5	119	84.21	-2.29	0.71	0.903560
6359	3R_DroMel_CAF1	16,663,090 – 16,663,183	- - - - - - - - -	10370	16,663,090 – 16,663,183	+	5	93	91.29	-2.00	0.73	0.650791
6360	3R_DroMel_CAF1	16,664,081 – 16,664,182	- - - "knownCDS=Parent=FBtr0083966;Name=Synd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33094-RB" - - - - -	10371	16,664,081 – 16,664,182	+	6	105	79.55	-2.38	0.76	0.953016
6360	3R_DroMel_CAF1	16,664,081 – 16,664,182		10372	16,664,081 – 16,664,182	-	6	105	79.55	-1.73	0.70	0.850439
6361	3R_DroMel_CAF1	16,673,250 – 16,673,358	- - - "knownCDS=Parent=FBtr0083968;Name=CG15696-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15696-RA" - - - - -	10373	16,673,250 – 16,673,358	-	6	120	81.37	-1.78	0.65	0.677525
6362	3R_DroMel_CAF1	16,677,306 – 16,677,411	- - - - - - - - -	10374	16,677,306 – 16,677,411	+	3	105	90.13	-1.54	0.89	0.500000
6363	3R_DroMel_CAF1	16,679,005 – 16,679,105	- - - - - - - - -	10375	16,679,005 – 16,679,105	-	6	111	80.87	-1.74	0.62	0.621429
6364	3R_DroMel_CAF1	16,679,585 – 16,679,680	- - - "knownCDS=Parent=FBtr0083989;Name=CG17274-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17274-RA" - - - - -	10376	16,679,585 – 16,679,680	+	6	113	76.71	-1.97	0.49	0.704190
6365	3R_DroMel_CAF1	16,694,726 – 16,694,822	- - - - - - - - -	10377	16,694,726 – 16,694,822	-	3	96	95.83	-2.14	0.99	0.943160
6366	3R_DroMel_CAF1	16,695,215 – 16,695,323	- - - - - - - - -	10378	16,695,215 – 16,695,323	-	6	120	82.68	-2.01	0.69	0.696122
6367	3R_DroMel_CAF1	16,697,068 – 16,697,188	- - - "knownCDS=Parent=FBtr0083971;Name=TotA-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31509-RA" - - - - -	10379	16,697,068 – 16,697,188	+	5	120	88.00	-1.76	0.71	0.579143
6368	3R_DroMel_CAF1	16,701,507 – 16,701,605	- - - - - - - - -	10380	16,701,507 – 16,701,605	+	6	108	77.14	-3.02	0.46	0.987518
6368	3R_DroMel_CAF1	16,701,507 – 16,701,605	- - - - - - - - -	10381	16,701,507 – 16,701,605	-	6	108	77.14	-2.04	0.47	0.668054
6369	3R_DroMel_CAF1	16,711,920 – 16,712,017	- - - - - - - - -	10382	16,711,920 – 16,712,017	+	5	120	72.51	-1.98	0.51	0.929058
6370	3R_DroMel_CAF1	16,714,163 – 16,714,261	- - - - - - - - -	10383	16,714,163 – 16,714,261	+	5	120	69.96	-2.17	0.25	0.944480
6371	3R_DroMel_CAF1	16,715,728 – 16,715,921	- - - - - - - - -	10384	16,715,728 – 16,715,827	-	5	120	77.50	-2.29	0.42	0.933995
				10385	16,715,827 – 16,715,921	+	5	120	78.69	-2.75	0.65	0.995517
				10386	16,715,827 – 16,715,921	-	5	120	78.69	-2.91	0.88	0.997673
6372	3R_DroMel_CAF1	16,716,842 – 16,716,957	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000249;Name=Dmel_Thr_CGT_14000249;TFAMID=DmelTCGT-16716844" "tRNAscan=type:Thr:anticodon:CGT f:16716843_t:16716915_strand=+_cove=77.47" - - "Rfam=AC007772.5/175928-175999_RF00005;tRNA;\|9e-35" - - - "Flybase=FBgn0051333:CR31333:cytosolic_tRNA_gene\|1e-36"	10387	16,716,842 – 16,716,957	+	3	120	80.62	-0.95	0.90	0.771965
6372	3R_DroMel_CAF1	16,716,842 – 16,716,957		10388	16,716,842 – 16,716,957	-	3	120	80.62	-1.65	0.95	0.991628
6373	3R_DroMel_CAF1	16,720,189 – 16,720,297	- - - - - - - - -	10389	16,720,189 – 16,720,297	-	5	120	76.47	-1.89	0.27	0.767524
6374	3R_DroMel_CAF1	16,721,177 – 16,721,280	- - - - - - - - -	10390	16,721,177 – 16,721,280	+	4	112	60.64	-3.34	0.31	0.619164
6375	3R_DroMel_CAF1	16,723,476 – 16,723,567	- - - - - - - - -	10391	16,723,476 – 16,723,567	+	6	102	88.38	-2.13	0.81	0.679823
6376	3R_DroMel_CAF1	16,731,853 – 16,731,948	- - - "knownCDS=Parent=FBtr0083978;Name=CG5621-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5621-RA" - - - - -	10392	16,731,853 – 16,731,948	-	6	96	74.21	-1.55	0.56	0.644467
6377	3R_DroMel_CAF1	16,732,068 – 16,732,168	- - - "knownCDS=Parent=FBtr0083978;Name=CG5621-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5621-RA" - - - - -	10393	16,732,068 – 16,732,168	+	6	110	76.85	-1.60	0.57	0.611633
6378	3R_DroMel_CAF1	16,734,935 – 16,735,026	- - - - - - - - -	10394	16,734,935 – 16,735,026	-	6	91	86.39	-2.23	0.78	0.608772
6379	3R_DroMel_CAF1	16,743,693 – 16,743,783	- - - - - - - - -	10395	16,743,693 – 16,743,783	+	5	97	77.81	-2.37	0.45	0.952211
6380	3R_DroMel_CAF1	16,744,639 – 16,744,734	- - - - - - - - -	10396	16,744,639 – 16,744,734	-	6	108	83.36	-1.99	0.78	0.758443
6381	3R_DroMel_CAF1	16,752,495 – 16,752,586	- - - "knownCDS=Parent=FBtr0083979;Name=CG5630-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5630-RA" - - - - -	10397	16,752,495 – 16,752,586	-	6	98	74.07	-2.12	0.40	0.799266
6382	3R_DroMel_CAF1	16,753,484 – 16,753,620	- - - - - - - - -	10398	16,753,484 – 16,753,592	+	3	115	91.81	-1.82	0.93	0.780065
6382	3R_DroMel_CAF1	16,753,484 – 16,753,620	- - - - - - - - -	10399	16,753,524 – 16,753,620	+	3	103	91.50	-2.33	0.81	0.703472
6383	3R_DroMel_CAF1	16,756,528 – 16,756,722	- - - - - - - - -	10400	16,756,528 – 16,756,648	+	6	120	98.72	-1.00	0.95	0.800096
				10401	16,756,568 – 16,756,685	+	6	117	94.64	-2.17	0.95	0.999444
				10402	16,756,568 – 16,756,685	-	6	117	94.64	-0.94	0.93	0.573615
				10403	16,756,608 – 16,756,722	-	5	117	82.17	-2.18	0.72	0.920613
6384	3R_DroMel_CAF1	16,762,511 – 16,762,603	- - - - - - - - -	10404	16,762,511 – 16,762,603	-	5	103	86.16	-1.98	0.80	0.893667
6385	3R_DroMel_CAF1	16,762,920 – 16,763,024	- - - - - - - - -	10405	16,762,920 – 16,763,024	+	6	119	71.50	-1.89	0.40	0.711070
6386	3R_DroMel_CAF1	16,764,334 – 16,764,434	- - - - - - - - -	10406	16,764,334 – 16,764,434	+	4	103	80.40	-2.30	0.57	0.825339
6387	3R_DroMel_CAF1	16,765,567 – 16,765,683	- - - - - - - - -	10407	16,765,567 – 16,765,683	+	4	116	87.93	-2.11	0.75	0.859318
6388	3R_DroMel_CAF1	16,766,190 – 16,766,282	- - - - - - - - -	10408	16,766,190 – 16,766,282	-	4	100	84.50	-2.57	0.77	0.976943
6389	3R_DroMel_CAF1	16,767,439 – 16,767,531	- - - - - - - - -	10409	16,767,439 – 16,767,531	+	5	94	86.04	-1.86	0.75	0.771727
6389	3R_DroMel_CAF1	16,767,439 – 16,767,531	- - - - - - - - -	10410	16,767,439 – 16,767,531	-	5	94	86.04	-2.35	0.86	0.989347
6390	3R_DroMel_CAF1	16,767,656 – 16,767,773	- - - - - - - - -	10411	16,767,656 – 16,767,773	-	6	119	71.53	-2.10	0.37	0.841061
6391	3R_DroMel_CAF1	16,768,248 – 16,768,482	- - - - - - - - -	10412	16,768,248 – 16,768,362	+	3	120	85.84	-1.61	0.91	0.829040
				10413	16,768,248 – 16,768,362	-	3	120	85.84	-1.51	0.88	0.642176
				10414	16,768,322 – 16,768,442	+	3	120	97.77	-2.25	0.90	0.803001
				10415	16,768,322 – 16,768,442	-	3	120	97.77	-3.65	0.96	0.986995
				10416	16,768,362 – 16,768,482	-	3	120	98.89	-2.17	0.99	0.931187
6392	3R_DroMel_CAF1	16,769,702 – 16,769,810	- - - - - - - - -	10417	16,769,702 – 16,769,810	+	3	120	90.28	-2.40	0.82	0.788441
6393	3R_DroMel_CAF1	16,770,142 – 16,770,542	- - - - - - - - -	10418	16,770,142 – 16,770,262	-	3	120	96.66	-2.82	0.80	0.668661
				10419	16,770,182 – 16,770,302	+	3	120	93.87	-1.96	0.90	0.743232
				10420	16,770,262 – 16,770,382	-	3	120	90.11	-2.27	0.84	0.794228
				10421	16,770,302 – 16,770,422	-	3	120	92.37	-3.86	0.85	0.954673
				10422	16,770,422 – 16,770,542	+	3	120	96.67	-2.13	0.95	0.889037
6394	3R_DroMel_CAF1	16,771,218 – 16,771,338	- - - - - - - - -	10423	16,771,218 – 16,771,338	+	3	120	100.00	-1.40	1.00	0.590436
6395	3R_DroMel_CAF1	16,771,910 – 16,772,008	- - - - - - - - -	10424	16,771,910 – 16,772,008	+	4	120	82.33	-2.50	0.74	0.980777
6396	3R_DroMel_CAF1	16,772,356 – 16,772,636	- - - - - - - - -	10425	16,772,356 – 16,772,476	+	4	120	93.67	-1.41	0.98	0.712433
				10426	16,772,476 – 16,772,596	+	4	120	85.10	-1.96	0.78	0.866184
				10427	16,772,476 – 16,772,596	-	4	120	85.10	-1.41	0.74	0.509245
				10428	16,772,516 – 16,772,636	-	4	120	94.03	-1.48	0.86	0.531515
6397	3R_DroMel_CAF1	16,772,913 – 16,773,026	- - - - - - - - -	10429	16,772,913 – 16,773,026	+	4	120	89.13	-1.80	0.83	0.822490
6397	3R_DroMel_CAF1	16,772,913 – 16,773,026	- - - - - - - - -	10430	16,772,913 – 16,773,026	-	4	120	89.13	-1.98	0.87	0.927081
6398	3R_DroMel_CAF1	16,775,319 – 16,775,437	- - - - - - - - -	10431	16,775,319 – 16,775,437	-	4	118	96.47	-1.57	0.92	0.581429
6399	3R_DroMel_CAF1	16,777,075 – 16,777,270	- - - - - - - - -	10432	16,777,075 – 16,777,170	+	4	95	98.77	-2.36	0.98	0.907682
				10433	16,777,075 – 16,777,170	-	4	95	98.77	-2.52	0.96	0.909495
				10434	16,777,170 – 16,777,270	-	4	104	93.14	-1.53	0.84	0.568652
6400	3R_DroMel_CAF1	16,777,411 – 16,777,603	- - - - - - - - -	10435	16,777,411 – 16,777,523	-	4	112	90.03	-1.53	0.76	0.556909
6400	3R_DroMel_CAF1	16,777,411 – 16,777,603	- - - - - - - - -	10436	16,777,483 – 16,777,603	+	4	120	93.47	-1.58	0.83	0.569518
6401	3R_DroMel_CAF1	16,778,012 – 16,778,146	- - - - - - - - -	10437	16,778,012 – 16,778,114	+	5	120	73.13	-2.74	0.50	0.998960
				10438	16,778,012 – 16,778,114	-	5	120	73.13	-1.72	0.33	0.580185
				10439	16,778,052 – 16,778,146	+	4	102	92.79	-2.09	0.92	0.963282
				10440	16,778,052 – 16,778,146	-	4	102	92.79	-1.81	0.81	0.695240
6402	3R_DroMel_CAF1	16,778,396 – 16,778,486	- - - - - - - - -	10441	16,778,396 – 16,778,486	+	4	93	92.35	-1.73	0.78	0.598733
6402	3R_DroMel_CAF1	16,778,396 – 16,778,486	- - - - - - - - -	10442	16,778,396 – 16,778,486	-	4	93	92.35	-1.57	0.84	0.627479
6403	3R_DroMel_CAF1	16,780,000 – 16,780,099	- - - - - - - - -	10443	16,780,000 – 16,780,099	+	4	99	100.00	-2.39	1.00	0.836933
6404	3R_DroMel_CAF1	16,780,349 – 16,780,469	- - - - - - - - -	10444	16,780,349 – 16,780,469	+	4	120	92.36	-3.99	0.85	0.974542
6405	3R_DroMel_CAF1	16,780,992 – 16,781,111	- - - - - - - - -	10445	16,780,992 – 16,781,111	+	4	119	96.08	-1.55	0.97	0.690516
6406	3R_DroMel_CAF1	16,783,784 – 16,783,880	- - - - - - - - -	10446	16,783,784 – 16,783,880	+	3	96	100.00	-3.02	1.00	0.987623
6407	3R_DroMel_CAF1	16,784,522 – 16,784,614	- - - - - - - - -	10447	16,784,522 – 16,784,614	+	3	92	97.10	-2.29	0.95	0.930625
6408	3R_DroMel_CAF1	16,784,692 – 16,784,823	- - - - - - - - -	10448	16,784,692 – 16,784,794	+	5	120	70.46	-2.18	0.53	0.986276
				10449	16,784,724 – 16,784,823	+	4	99	97.98	-2.48	0.96	0.943032
				10450	16,784,724 – 16,784,823	-	4	99	97.98	-2.76	0.91	0.920215
6409	3R_DroMel_CAF1	16,785,324 – 16,785,444	- - - - - - - - -	10451	16,785,324 – 16,785,444	+	4	120	95.83	-1.62	0.87	0.529032
6410	3R_DroMel_CAF1	16,785,484 – 16,785,602	- - - - - - - - -	10452	16,785,484 – 16,785,602	+	4	120	90.21	-1.85	0.88	0.895875
6411	3R_DroMel_CAF1	16,785,784 – 16,785,874	- - - - - - - - -	10453	16,785,784 – 16,785,874	+	4	102	91.15	-1.31	0.91	0.543843
6412	3R_DroMel_CAF1	16,786,828 – 16,786,933	- - - - - - - - -	10454	16,786,828 – 16,786,933	-	5	105	97.89	-1.36	0.92	0.751038
6413	3R_DroMel_CAF1	16,787,913 – 16,788,023	- - - "knownCDS=Parent=FBtr0089510;Name=Atpalpha-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5670-RA" - - - - -	10455	16,787,913 – 16,788,023	-	6	113	80.28	-1.33	0.77	0.704801
6414	3R_DroMel_CAF1	16,789,475 – 16,789,586	- - - "knownCDS=Parent=FBtr0089509, FBtr0089511, FBtr0089513, FBtr0089514, FBtr0089515, FBtr0089516;Name=Atpalpha-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5670-RC, FlyBase+Annotation+IDs:CG5670-RB, FlyBase+Annotation+IDs:CG5670-RE, FlyBase+Annotation+IDs:CG5670-RF, FlyBase+Annotation+IDs:CG5670-RG, FlyBase+Annotation+IDs:CG5670-RH" - - - - -	10456	16,789,475 – 16,789,586	-	6	120	87.89	-1.64	0.86	0.670775
6415	3R_DroMel_CAF1	16,790,710 – 16,790,830	- - - "knownCDS=Parent=FBtr0089509, FBtr0089511, FBtr0089513, FBtr0089514, FBtr0089515, FBtr0089516;Name=Atpalpha-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5670-RC, FlyBase+Annotation+IDs:CG5670-RB, FlyBase+Annotation+IDs:CG5670-RE, FlyBase+Annotation+IDs:CG5670-RF, FlyBase+Annotation+IDs:CG5670-RG, FlyBase+Annotation+IDs:CG5670-RH" - - - - -	10457	16,790,710 – 16,790,830	-	6	120	94.67	-1.84	0.93	0.994521
6416	3R_DroMel_CAF1	16,794,075 – 16,794,165	- - - - - - - - -	10458	16,794,075 – 16,794,165	+	6	117	73.01	-0.85	0.79	0.846520
6417	3R_DroMel_CAF1	16,795,423 – 16,795,515	- - - - - - - - -	10459	16,795,423 – 16,795,515	+	5	92	79.67	-1.43	0.76	0.600455
6418	3R_DroMel_CAF1	16,795,539 – 16,795,629	- - - - - - - - -	10460	16,795,539 – 16,795,629	-	5	90	94.22	-1.55	0.87	0.906340
6419	3R_DroMel_CAF1	16,799,491 – 16,799,591	- - - - - - - - -	10461	16,799,491 – 16,799,591	+	6	114	76.09	-1.41	0.95	0.928155
6420	3R_DroMel_CAF1	16,800,842 – 16,800,949	- - - - - - - - -	10462	16,800,842 – 16,800,949	-	5	113	87.57	-1.70	0.85	0.852833
6421	3R_DroMel_CAF1	16,809,603 – 16,809,739	- - - - - - - - -	10463	16,809,603 – 16,809,716	+	5	118	90.16	-2.03	0.76	0.837694
6421	3R_DroMel_CAF1	16,809,603 – 16,809,739	- - - - - - - - -	10464	16,809,639 – 16,809,739	+	5	101	91.56	-1.72	0.74	0.528320
6422	3R_DroMel_CAF1	16,813,229 – 16,813,332	- - - - - - - - -	10465	16,813,229 – 16,813,332	-	3	103	89.97	-1.46	0.96	0.758544
6423	3R_DroMel_CAF1	16,813,675 – 16,813,795	- - - - - - - - -	10466	16,813,675 – 16,813,795	+	3	120	85.83	-1.58	0.85	0.581882
6424	3R_DroMel_CAF1	16,817,130 – 16,817,228	- - - - - - - - -	10467	16,817,130 – 16,817,228	+	4	98	92.35	-1.46	0.85	0.576335
6425	3R_DroMel_CAF1	16,821,565 – 16,821,707	- - - - - - - - -	10468	16,821,565 – 16,821,667	-	5	120	70.90	-1.94	0.24	0.863023
				10469	16,821,588 – 16,821,707	+	3	119	89.20	-3.46	0.62	0.584010
				10470	16,821,588 – 16,821,707	-	3	119	89.20	-2.43	0.77	0.717797
6426	3R_DroMel_CAF1	16,822,385 – 16,822,477	- - - - - - - - -	10471	16,822,385 – 16,822,477	+	5	92	92.26	-2.98	0.97	0.999990
6426	3R_DroMel_CAF1	16,822,385 – 16,822,477	- - - - - - - - -	10472	16,822,385 – 16,822,477	-	5	92	92.26	-1.76	0.83	0.917169
6427	3R_DroMel_CAF1	16,825,001 – 16,825,104	- - - - - - - - -	10473	16,825,001 – 16,825,104	-	5	103	93.78	-1.15	0.92	0.662450
6428	3R_DroMel_CAF1	16,829,493 – 16,829,594	- - - - - - - - -	10474	16,829,493 – 16,829,594	+	4	120	77.73	-2.17	0.54	0.786308
6429	3R_DroMel_CAF1	16,844,295 – 16,844,415	- - - "knownCDS=Parent=FBtr0084002;Name=Rlip-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11622-RA" - - - - -	10475	16,844,295 – 16,844,415	-	6	120	82.56	-2.57	0.69	0.827116
6430	3R_DroMel_CAF1	16,848,717 – 16,848,857	- - - - - - - - -	10476	16,848,717 – 16,848,817	+	3	106	79.48	-2.26	0.55	0.573988
				10477	16,848,738 – 16,848,857	+	5	119	79.21	-2.17	0.54	0.867159
				10478	16,848,738 – 16,848,857	-	5	119	79.21	-1.97	0.58	0.780854
6431	3R_DroMel_CAF1	16,853,784 – 16,853,880	- - - - - - - - -	10479	16,853,784 – 16,853,880	+	6	103	80.45	-1.94	0.59	0.691922
6431	3R_DroMel_CAF1	16,853,784 – 16,853,880	- - - - - - - - -	10480	16,853,784 – 16,853,880	-	6	103	80.45	-1.14	0.73	0.548607
6432	3R_DroMel_CAF1	16,855,391 – 16,855,721	- - - "knownCDS=Parent=FBtr0084046;Name=Dhc93AB-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3723-RA" - - - - -	10481	16,855,391 – 16,855,511	-	6	120	87.78	-1.77	0.81	0.513622
				10482	16,855,471 – 16,855,564	-	6	100	77.18	-1.41	0.69	0.826645
				10483	16,855,564 – 16,855,681	-	6	120	80.27	-1.76	0.67	0.794411
				10484	16,855,601 – 16,855,721	-	6	120	82.50	-1.47	0.72	0.551224
6433	3R_DroMel_CAF1	16,856,110 – 16,856,230	- - - "knownCDS=Parent=FBtr0084046;Name=Dhc93AB-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3723-RA" - - - - -	10485	16,856,110 – 16,856,230	-	6	120	80.56	-2.02	0.57	0.656786
6434	3R_DroMel_CAF1	16,856,830 – 16,856,950	- - - "knownCDS=Parent=FBtr0084046;Name=Dhc93AB-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3723-RA" - - - - -	10486	16,856,830 – 16,856,950	-	6	120	94.78	-1.63	0.98	0.997375
6435	3R_DroMel_CAF1	16,857,558 – 16,857,718	- - - "knownCDS=Parent=FBtr0084046;Name=Dhc93AB-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3723-RA" - - - - -	10487	16,857,558 – 16,857,678	-	6	120	97.78	-1.38	0.92	0.924363
				10488	16,857,598 – 16,857,718	+	6	120	96.33	-2.62	0.85	0.979394
				10489	16,857,598 – 16,857,718	-	6	120	96.33	-2.83	0.89	0.998416
6436	3R_DroMel_CAF1	16,858,910 – 16,859,030	- - "RNAmicro=f:16858910_t:16859029_strand:+_p:0.923020" "knownCDS=Parent=FBtr0084046;Name=Dhc93AB-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3723-RA" - - - - -	10490	16,858,910 – 16,859,030	-	6	120	90.44	-2.45	0.90	0.994587
6437	3R_DroMel_CAF1	16,861,207 – 16,861,327	- - - - - - - - -	10491	16,861,207 – 16,861,327	-	5	120	95.92	-1.26	0.88	0.605017
6438	3R_DroMel_CAF1	16,861,795 – 16,861,915	- - - "knownCDS=Parent=FBtr0084046;Name=Dhc93AB-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3723-RA" - - - - -	10492	16,861,795 – 16,861,915	-	6	120	86.33	-1.71	0.80	0.500000
6439	3R_DroMel_CAF1	16,869,419 – 16,869,554	- - - - - - - - -	10493	16,869,419 – 16,869,519	+	6	102	82.45	-2.38	0.67	0.773078
				10494	16,869,456 – 16,869,554	+	6	101	80.66	-2.49	0.60	0.883793
				10495	16,869,456 – 16,869,554	-	6	101	80.66	-1.62	0.63	0.611812
6440	3R_DroMel_CAF1	16,871,190 – 16,871,283	- - - "knownCDS=Parent=FBtr0084045;Name=CG31189-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31189-RA" - - - - -	10496	16,871,190 – 16,871,283	-	6	93	80.93	-1.37	0.65	0.500000
6441	3R_DroMel_CAF1	16,875,387 – 16,875,501	- - - - - - - - -	10497	16,875,387 – 16,875,501	+	3	114	92.38	-2.35	0.78	0.604395
6442	3R_DroMel_CAF1	16,875,552 – 16,875,660	- - - - - - - - -	10498	16,875,552 – 16,875,660	+	3	110	79.68	-1.58	0.79	0.782599
6443	3R_DroMel_CAF1	16,877,638 – 16,877,736	- - "RNAmicro=f:16877638_t:16877736_strand:-_p:0.996893" - - - - - -	10499	16,877,638 – 16,877,736	+	6	99	72.62	-2.55	0.65	0.995354
6443	3R_DroMel_CAF1	16,877,638 – 16,877,736		10500	16,877,638 – 16,877,736	-	6	99	72.62	-2.36	0.72	0.993348
6444	3R_DroMel_CAF1	16,879,808 – 16,879,910	- - - - - - - - -	10501	16,879,808 – 16,879,910	-	6	105	81.60	-3.52	0.37	0.714769
6445	3R_DroMel_CAF1	16,886,349 – 16,886,491	- - - - - - - - -	10502	16,886,349 – 16,886,468	+	5	120	90.95	-1.82	0.80	0.874261
6445	3R_DroMel_CAF1	16,886,349 – 16,886,491	- - - - - - - - -	10503	16,886,389 – 16,886,491	+	5	103	93.36	-1.25	0.89	0.685785
6446	3R_DroMel_CAF1	16,887,261 – 16,887,358	- - - - - - - - -	10504	16,887,261 – 16,887,358	-	3	97	75.37	-2.05	0.61	0.959906
6447	3R_DroMel_CAF1	16,888,792 – 16,888,912	- - - "knownCDS=Parent=FBtr0084039;Name=Cortactin-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3637-RA" - - - - -	10505	16,888,792 – 16,888,912	+	6	120	80.94	-2.00	0.62	0.746418
6448	3R_DroMel_CAF1	16,895,611 – 16,895,712	- - - - - - - - -	10506	16,895,611 – 16,895,712	-	4	106	74.40	-1.79	0.54	0.507433
6449	3R_DroMel_CAF1	16,896,281 – 16,896,371	- - - - - - - - -	10507	16,896,281 – 16,896,371	-	4	90	94.63	-1.37	1.04	0.698354
6450	3R_DroMel_CAF1	16,899,398 – 16,899,490	- - - - - - - - -	10508	16,899,398 – 16,899,490	+	6	100	70.19	-2.36	0.46	0.988844
6451	3R_DroMel_CAF1	16,902,199 – 16,902,360	- - - - - - - - -	10509	16,902,199 – 16,902,289	+	3	90	95.19	-2.15	0.97	0.932522
6451	3R_DroMel_CAF1	16,902,199 – 16,902,360	- - - - - - - - -	10510	16,902,249 – 16,902,360	+	4	111	85.44	-1.45	0.69	0.513695
6452	3R_DroMel_CAF1	16,902,848 – 16,902,968	- - - "knownCDS=Parent=FBtr0084037;Name=CG7056-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7056-RA" - - - - -	10511	16,902,848 – 16,902,968	-	6	120	83.44	-2.26	0.61	0.500000
6453	3R_DroMel_CAF1	16,903,048 – 16,903,142	- - - "knownCDS=Parent=FBtr0084037;Name=CG7056-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7056-RA" - - - - -	10512	16,903,048 – 16,903,142	+	6	96	78.29	-1.54	0.65	0.772956
6453	3R_DroMel_CAF1	16,903,048 – 16,903,142		10513	16,903,048 – 16,903,142	-	6	96	78.29	-2.31	0.78	0.968970
6454	3R_DroMel_CAF1	16,905,905 – 16,906,022	- - - "knownCDS=Parent=FBtr0084037;Name=CG7056-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7056-RA" - - - - -	10514	16,905,905 – 16,906,022	+	6	120	75.97	-1.90	0.50	0.712895
6454	3R_DroMel_CAF1	16,905,905 – 16,906,022		10515	16,905,905 – 16,906,022	-	6	120	75.97	-1.70	0.54	0.667370
6455	3R_DroMel_CAF1	16,906,190 – 16,906,307	- - - - - - - - -	10516	16,906,190 – 16,906,307	-	6	119	66.28	-1.75	0.38	0.687286
6456	3R_DroMel_CAF1	16,911,624 – 16,911,738	- - "RNAmicro=f:16911624_t:16911738_strand:+_p:0.970256" "knownCDS=Parent=FBtr0084036;Name=RhoGAP93B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3421-RA" - - - - -	10517	16,911,624 – 16,911,738	+	6	115	72.55	-1.50	0.63	0.889609
6457	3R_DroMel_CAF1	16,918,463 – 16,918,563	- - - - - - - - -	10518	16,918,463 – 16,918,563	-	6	100	80.59	-2.01	0.56	0.620038
6458	3R_DroMel_CAF1	16,923,520 – 16,923,634	- - - - - - - - -	10519	16,923,520 – 16,923,634	+	5	119	80.62	-1.63	0.65	0.541482
6459	3R_DroMel_CAF1	16,949,772 – 16,949,867	- - - - - - - - -	10520	16,949,772 – 16,949,867	+	6	99	83.55	-3.18	0.65	0.803791
6459	3R_DroMel_CAF1	16,949,772 – 16,949,867	- - - - - - - - -	10521	16,949,772 – 16,949,867	-	6	99	83.55	-2.51	0.68	0.691526
6460	3R_DroMel_CAF1	16,966,590 – 16,966,698	- - - - - - - - -	10522	16,966,590 – 16,966,698	+	5	108	88.56	-1.69	0.72	0.534102
6461	3R_DroMel_CAF1	16,976,115 – 16,976,220	- - - - - - - - -	10523	16,976,115 – 16,976,220	-	3	105	91.11	-1.81	0.88	0.615220
6462	3R_DroMel_CAF1	16,978,293 – 16,978,413	- - - - - - - - -	10524	16,978,293 – 16,978,413	+	3	120	96.11	-2.07	1.00	0.947220
6462	3R_DroMel_CAF1	16,978,293 – 16,978,413	- - - - - - - - -	10525	16,978,293 – 16,978,413	-	3	120	96.11	-1.64	0.99	0.763427
6463	3R_DroMel_CAF1	16,979,848 – 16,979,938	- - - - - - - - -	10526	16,979,848 – 16,979,938	+	6	113	82.73	-1.42	0.74	0.532184
6464	3R_DroMel_CAF1	16,997,228 – 16,997,339	- - - - - - - - -	10527	16,997,228 – 16,997,339	+	5	115	88.42	-1.60	0.78	0.670719
6464	3R_DroMel_CAF1	16,997,228 – 16,997,339	- - - - - - - - -	10528	16,997,228 – 16,997,339	-	5	115	88.42	-1.92	0.75	0.781320
6465	3R_DroMel_CAF1	17,004,765 – 17,004,879	- - - "knownCDS=Parent=FBtr0084020;Name=SNF4Agamma-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17299-RF" - - - - -	10529	17,004,765 – 17,004,879	+	6	117	80.02	-1.18	0.73	0.598903
6465	3R_DroMel_CAF1	17,004,765 – 17,004,879		10530	17,004,765 – 17,004,879	-	6	117	80.02	-1.63	0.70	0.795201
6466	3R_DroMel_CAF1	17,011,242 – 17,011,336	- - - "knownCDS=Parent=FBtr0084018, FBtr0084019;Name=SNF4Agamma-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17299-RA, FlyBase+Annotation+IDs:CG17299-RB" - - - - -	10531	17,011,242 – 17,011,336	+	6	109	83.30	-1.62	0.76	0.587657
6467	3R_DroMel_CAF1	17,017,287 – 17,017,392	- - - - - - - - -	10532	17,017,287 – 17,017,392	+	3	119	80.76	-2.03	0.61	0.633714
6468	3R_DroMel_CAF1	17,018,280 – 17,018,382	- - - - - - - - -	10533	17,018,280 – 17,018,382	+	6	106	85.99	-2.11	0.79	0.645077
6469	3R_DroMel_CAF1	17,020,130 – 17,020,221	- - - - - - - - -	10534	17,020,130 – 17,020,221	+	5	111	69.78	-2.16	0.13	0.890046
6470	3R_DroMel_CAF1	17,021,912 – 17,022,016	- - - - - - - - -	10535	17,021,912 – 17,022,016	+	3	106	74.83	-2.20	0.56	0.933580
6471	3R_DroMel_CAF1	17,027,400 – 17,027,493	- - - "knownCDS=Parent=FBtr0084021;Name=SNF4Agamma-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17299-RC" - - - - -	10536	17,027,400 – 17,027,493	-	6	93	82.95	-2.26	0.72	0.762171
6472	3R_DroMel_CAF1	17,031,296 – 17,031,410	- - - "knownCDS=Parent=FBtr0084023;Name=SNF4Agamma-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17299-RH" - - - - -	10537	17,031,296 – 17,031,410	+	6	118	82.22	-2.30	0.69	0.805381
6473	3R_DroMel_CAF1	17,032,933 – 17,033,026	- - - - - - - - -	10538	17,032,933 – 17,033,026	+	5	105	78.69	-2.29	0.62	0.963257
6474	3R_DroMel_CAF1	17,036,486 – 17,036,601	- - - "knownCDS=Parent=FBtr0084018, FBtr0084019, FBtr0084021;Name=SNF4Agamma-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17299-RA, FlyBase+Annotation+IDs:CG17299-RB, FlyBase+Annotation+IDs:CG17299-RC" - - - - -	10539	17,036,486 – 17,036,601	-	6	119	82.67	-1.41	0.78	0.566884
6475	3R_DroMel_CAF1	17,036,721 – 17,036,827	- - - "knownCDS=Parent=FBtr0084025;Name=SNF4Agamma-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17299-RD" - - - - -	10540	17,036,721 – 17,036,827	-	6	114	78.16	-1.59	0.72	0.884194
6476	3R_DroMel_CAF1	17,037,453 – 17,037,560	- - - "knownCDS=Parent=FBtr0084018, FBtr0084019;Name=SNF4Agamma-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17299-RA, FlyBase+Annotation+IDs:CG17299-RB" - - - - -	10541	17,037,453 – 17,037,560	-	6	118	81.45	-1.51	0.72	0.664120
6477	3R_DroMel_CAF1	17,038,143 – 17,038,250	- - "RNAmicro=f:17038143_t:17038262_strand:+_p:0.798989" "knownCDS=Parent=FBtr0084020, FBtr0084022, FBtr0084023, FBtr0084024;Name=SNF4Agamma-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17299-RF, FlyBase+Annotation+IDs:CG17299-RE, FlyBase+Annotation+IDs:CG17299-RH, FlyBase+Annotation+IDs:CG17299-RG" - - - - -	10542	17,038,143 – 17,038,250	+	6	120	79.29	-1.82	0.64	0.827330
6478	3R_DroMel_CAF1	17,039,309 – 17,039,429	- - - - - - - - -	10543	17,039,309 – 17,039,429	+	3	120	82.51	-1.95	0.73	0.772365
6479	3R_DroMel_CAF1	17,044,428 – 17,044,542	- - - - - - - - -	10544	17,044,428 – 17,044,542	-	3	118	86.86	-2.60	0.84	0.927883
6480	3R_DroMel_CAF1	17,044,729 – 17,044,846	- - - - - - - - -	10545	17,044,729 – 17,044,846	+	3	119	75.84	-3.01	0.65	0.999755
6480	3R_DroMel_CAF1	17,044,729 – 17,044,846	- - - - - - - - -	10546	17,044,729 – 17,044,846	-	3	119	75.84	-3.04	0.58	0.998460
6481	3R_DroMel_CAF1	17,051,968 – 17,052,083	- - - "knownCDS=Parent=FBtr0084051;Name=CG5874-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5874-RA" - - - - -	10547	17,051,968 – 17,052,083	-	6	120	76.84	-2.34	0.44	0.845074
6482	3R_DroMel_CAF1	17,053,753 – 17,053,861	- - - "knownCDS=Parent=FBtr0084051;Name=CG5874-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5874-RA" - - - - -	10548	17,053,753 – 17,053,861	+	5	108	96.39	-1.86	0.96	0.997150
6482	3R_DroMel_CAF1	17,053,753 – 17,053,861		10549	17,053,753 – 17,053,861	-	5	108	96.39	-1.65	0.96	0.990503
6483	3R_DroMel_CAF1	17,060,556 – 17,060,646	- - - - - - - - -	10550	17,060,556 – 17,060,646	+	5	105	74.56	-4.06	0.16	0.999506
6483	3R_DroMel_CAF1	17,060,556 – 17,060,646	- - - - - - - - -	10551	17,060,556 – 17,060,646	-	5	105	74.56	-4.46	0.23	0.999716
6484	3R_DroMel_CAF1	17,060,700 – 17,060,795	- - - - - - - - -	10552	17,060,700 – 17,060,795	+	6	95	91.99	-2.75	0.93	0.999564
6484	3R_DroMel_CAF1	17,060,700 – 17,060,795	- - - - - - - - -	10553	17,060,700 – 17,060,795	-	6	95	91.99	-3.59	0.90	0.999721
6485	3R_DroMel_CAF1	17,064,008 – 17,064,107	- - - - - - - - -	10554	17,064,008 – 17,064,107	+	5	99	96.57	-1.64	0.84	0.768880
6486	3R_DroMel_CAF1	17,075,739 – 17,075,847	- - - - - - - - -	10555	17,075,739 – 17,075,847	+	5	118	83.29	-2.45	0.46	0.513895
6487	3R_DroMel_CAF1	17,081,830 – 17,081,934	- - - - - - - - -	10556	17,081,830 – 17,081,934	-	6	114	79.61	-1.38	0.71	0.720175
6488	3R_DroMel_CAF1	17,083,026 – 17,083,160	- - - - - - - - -	10557	17,083,026 – 17,083,121	+	6	110	80.47	-2.01	0.61	0.763817
6488	3R_DroMel_CAF1	17,083,026 – 17,083,160	- - - - - - - - -	10558	17,083,061 – 17,083,160	+	5	114	90.48	-1.50	0.92	0.926808
6489	3R_DroMel_CAF1	17,083,698 – 17,083,789	- - - - - - - - -	10559	17,083,698 – 17,083,789	+	5	91	90.52	-1.57	0.83	0.818343
6490	3R_DroMel_CAF1	17,088,159 – 17,088,276	- - - "knownCDS=Parent=FBtr0084054;Name=ETHR-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5911-RA" - - - - -	10560	17,088,159 – 17,088,276	-	6	117	80.85	-1.77	0.64	0.702579
6491	3R_DroMel_CAF1	17,088,414 – 17,088,512	- - - "knownCDS=Parent=FBtr0084054;Name=ETHR-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5911-RA" - - - - -	10561	17,088,414 – 17,088,512	-	5	98	87.76	-1.95	0.71	0.700817
6492	3R_DroMel_CAF1	17,097,247 – 17,097,428	- - - - - - - - -	10562	17,097,247 – 17,097,338	-	6	114	71.47	-3.23	0.60	0.998210
6492	3R_DroMel_CAF1	17,097,247 – 17,097,428	- - - - - - - - -	10563	17,097,338 – 17,097,428	+	6	96	82.86	-1.88	0.67	0.600833
6493	3R_DroMel_CAF1	17,098,331 – 17,098,451	- - - "knownCDS=Parent=FBtr0084102;Name=CG3308-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3308-RA" - - - - -	10564	17,098,331 – 17,098,451	+	6	120	83.89	-2.37	0.68	0.629655
6494	3R_DroMel_CAF1	17,104,644 – 17,104,739	- - - - - - - - -	10565	17,104,644 – 17,104,739	+	5	95	78.85	-2.94	0.61	0.996854
6495	3R_DroMel_CAF1	17,108,053 – 17,108,153	- - - - - - - - -	10566	17,108,053 – 17,108,153	+	6	117	78.08	-1.95	0.54	0.747974
6496	3R_DroMel_CAF1	17,109,212 – 17,109,302	- - - - - - - - -	10567	17,109,212 – 17,109,302	+	5	90	94.44	-1.42	0.85	0.745918
6497	3R_DroMel_CAF1	17,111,894 – 17,111,999	- - - - - - - - -	10568	17,111,894 – 17,111,999	+	4	105	80.79	-3.00	0.44	0.612862
6498	3R_DroMel_CAF1	17,115,476 – 17,115,606	- - - - - - - - -	10569	17,115,476 – 17,115,584	-	3	108	89.10	-3.03	0.84	0.946998
				10570	17,115,511 – 17,115,606	+	4	97	82.89	-1.66	0.67	0.606756
				10571	17,115,511 – 17,115,606	-	4	97	82.89	-1.79	0.75	0.777359
6499	3R_DroMel_CAF1	17,117,219 – 17,117,336	- - - "knownCDS=Parent=FBtr0084098;Name=CG10823-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10823-RA" - - - - -	10572	17,117,219 – 17,117,336	+	6	120	78.64	-1.99	0.62	0.888909
6500	3R_DroMel_CAF1	17,117,749 – 17,117,851	- - - - - - - - -	10573	17,117,749 – 17,117,851	-	6	104	92.05	-3.06	0.90	0.999257
6501	3R_DroMel_CAF1	17,119,438 – 17,119,528	- - - - - - - - -	10574	17,119,438 – 17,119,528	+	3	90	82.16	-2.02	0.71	0.800301
6501	3R_DroMel_CAF1	17,119,438 – 17,119,528	- - - - - - - - -	10575	17,119,438 – 17,119,528	-	3	90	82.16	-2.22	0.85	0.958966
6502	3R_DroMel_CAF1	17,122,510 – 17,122,614	- - - - - - - "ncRNAdb=DmelaNR_002069_Hsr_omega,\|4e-53" -	10576	17,122,510 – 17,122,614	+	6	106	73.36	-2.06	0.41	0.798863
6503	3R_DroMel_CAF1	17,123,627 – 17,123,729	- - - - - - - "ncRNAdb=DmelaNR_002069_Hsr_omega,\|5e-52" -	10577	17,123,627 – 17,123,729	+	6	104	74.32	-2.58	0.58	0.993860
6504	3R_DroMel_CAF1	17,142,922 – 17,143,038	- - - - - - - - -	10578	17,142,922 – 17,143,038	+	3	116	93.10	-2.65	0.92	0.956888
6505	3R_DroMel_CAF1	17,149,165 – 17,149,278	- - - "knownCDS=Parent=FBtr0084095;Name=CG16791-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16791-RA" - - - - -	10579	17,149,165 – 17,149,278	-	6	120	78.90	-1.00	0.73	0.541070
6506	3R_DroMel_CAF1	17,160,208 – 17,160,349	- - - "knownCDS=Parent=FBtr0084095;Name=CG16791-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16791-RA" - - - - -	10580	17,160,208 – 17,160,312	+	6	111	86.58	-3.63	0.92	0.998175
				10581	17,160,208 – 17,160,312	-	6	111	86.58	-1.20	0.94	0.588197
				10582	17,160,232 – 17,160,349	+	6	120	98.08	-3.39	1.00	0.999993
				10583	17,160,232 – 17,160,349	-	6	120	98.08	-1.17	0.99	0.976623
6507	3R_DroMel_CAF1	17,160,956 – 17,161,059	- - - - - - - - -	10584	17,160,956 – 17,161,059	+	6	113	69.64	-2.70	0.47	0.997100
6507	3R_DroMel_CAF1	17,160,956 – 17,161,059	- - - - - - - - -	10585	17,160,956 – 17,161,059	-	6	113	69.64	-2.55	0.49	0.995594
6508	3R_DroMel_CAF1	17,161,402 – 17,161,530	- - "RNAmicro=f:17161402_t:17161515_strand:-_p:0.902739" - - - - - -	10586	17,161,402 – 17,161,510	+	5	114	91.41	-1.83	0.89	0.987398
				10587	17,161,402 – 17,161,510	-	5	114	91.41	-3.08	0.88	0.999879
				10588	17,161,435 – 17,161,530	+	5	96	93.18	-4.29	0.88	0.999874
				10589	17,161,435 – 17,161,530	-	5	96	93.18	-4.57	0.93	0.999953
6509	3R_DroMel_CAF1	17,161,809 – 17,161,907	- - - - - - - - -	10590	17,161,809 – 17,161,907	-	6	105	80.09	-1.43	0.62	0.500000
6510	3R_DroMel_CAF1	17,163,309 – 17,163,407	- - - - - - - - -	10591	17,163,309 – 17,163,407	+	5	115	72.84	-1.72	0.65	0.929177
6511	3R_DroMel_CAF1	17,164,565 – 17,164,656	- - - - - - - - -	10592	17,164,565 – 17,164,656	-	4	106	83.42	-1.73	0.74	0.730874
6512	3R_DroMel_CAF1	17,165,271 – 17,165,391	- - - - - - - - -	10593	17,165,271 – 17,165,364	+	6	103	78.56	-1.05	0.73	0.595274
				10594	17,165,271 – 17,165,364	-	6	103	78.56	-1.71	0.86	0.923648
				10595	17,165,301 – 17,165,391	+	4	96	82.92	-3.37	0.71	0.996982
				10596	17,165,301 – 17,165,391	-	4	96	82.92	-2.73	0.70	0.983100
6513	3R_DroMel_CAF1	17,165,516 – 17,165,606	- - - - - - - - -	10597	17,165,516 – 17,165,606	+	6	100	75.79	-2.13	0.61	0.969315
6514	3R_DroMel_CAF1	17,170,776 – 17,170,888	- - - - - - - - -	10598	17,170,776 – 17,170,888	+	5	114	92.23	-1.55	0.77	0.532877
6515	3R_DroMel_CAF1	17,177,461 – 17,177,581	- - - "knownCDS=Parent=FBtr0084077;Name=mod(mdg4)-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32491-RR" - - - - -	10599	17,177,461 – 17,177,581	-	3	120	96.39	-1.68	0.93	0.585614
6516	3R_DroMel_CAF1	17,184,078 – 17,184,180	- - - "knownCDS=Parent=FBtr0084071;Name=mod(mdg4)-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32491-RL" - - - - -	10600	17,184,078 – 17,184,180	+	6	105	80.14	-1.75	0.67	0.798055
6517	3R_DroMel_CAF1	17,184,921 – 17,185,078	- - - - - - - - -	10601	17,184,921 – 17,185,038	+	5	117	85.30	-2.15	0.66	0.715836
6517	3R_DroMel_CAF1	17,184,921 – 17,185,078	- - - - - - - - -	10602	17,184,958 – 17,185,078	+	5	120	82.49	-2.24	0.77	0.948493
6518	3R_DroMel_CAF1	17,189,741 – 17,189,835	- - - - - - - - -	10603	17,189,741 – 17,189,835	+	6	100	81.32	-2.35	0.52	0.596630
6518	3R_DroMel_CAF1	17,189,741 – 17,189,835	- - - - - - - - -	10604	17,189,741 – 17,189,835	-	6	100	81.32	-1.98	0.66	0.765013
6519	3R_DroMel_CAF1	17,194,429 – 17,194,528	- - - - - - - - -	10605	17,194,429 – 17,194,528	-	6	106	76.61	-2.20	0.45	0.808190
6520	3R_DroMel_CAF1	17,195,603 – 17,195,693	- - - "knownCDS=Parent=FBtr0084080;Name=mod(mdg4)-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32491-RU" - - - - -	10606	17,195,603 – 17,195,693	+	3	120	69.53	-1.00	0.74	0.771493
6521	3R_DroMel_CAF1	17,199,253 – 17,199,394	- - - - - - - - -	10607	17,199,253 – 17,199,355	+	6	113	75.30	-1.80	0.51	0.713183
				10608	17,199,253 – 17,199,355	-	6	113	75.30	-2.26	0.69	0.987284
				10609	17,199,286 – 17,199,394	+	6	119	70.87	-2.14	0.53	0.980706
				10610	17,199,286 – 17,199,394	-	6	119	70.87	-1.98	0.57	0.974701
6522	3R_DroMel_CAF1	17,200,008 – 17,200,098	- - - - - - - - -	10611	17,200,008 – 17,200,098	+	6	95	80.58	-4.30	0.57	0.985155
6522	3R_DroMel_CAF1	17,200,008 – 17,200,098	- - - - - - - - -	10612	17,200,008 – 17,200,098	-	6	95	80.58	-5.16	0.72	0.973506
6523	3R_DroMel_CAF1	17,200,439 – 17,200,530	- - - - - - - - -	10613	17,200,439 – 17,200,530	+	6	110	79.52	-2.90	0.50	0.940057
6523	3R_DroMel_CAF1	17,200,439 – 17,200,530	- - - - - - - - -	10614	17,200,439 – 17,200,530	-	6	110	79.52	-4.15	0.62	0.988065
6524	3R_DroMel_CAF1	17,202,643 – 17,202,762	- - - "knownCDS=Parent=FBtr0084075;Name=mod(mdg4)-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32491-RP" - - - - -	10615	17,202,643 – 17,202,762	-	6	120	86.44	-2.10	0.83	0.768663
6525	3R_DroMel_CAF1	17,216,962 – 17,217,070	- - - - - - - - -	10616	17,216,962 – 17,217,070	-	4	109	88.00	-1.78	0.89	0.878837
6526	3R_DroMel_CAF1	17,220,009 – 17,220,115	- - - - - - - - -	10617	17,220,009 – 17,220,115	+	6	112	81.32	-1.84	0.62	0.630650
6527	3R_DroMel_CAF1	17,227,448 – 17,227,562	- - - - - - - - -	10618	17,227,448 – 17,227,562	-	4	114	89.25	-1.37	0.82	0.517993
6528	3R_DroMel_CAF1	17,230,179 – 17,230,339	- - - "knownCDS=Parent=FBtr0084088;Name=CG7907-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7907-RA" - - - - -	10619	17,230,179 – 17,230,299	-	5	120	85.42	-1.64	0.70	0.531576
				10620	17,230,219 – 17,230,339	+	5	120	83.58	-2.42	0.70	0.936954
				10621	17,230,219 – 17,230,339	-	5	120	83.58	-1.51	0.74	0.500000
6529	3R_DroMel_CAF1	17,232,598 – 17,232,717	- - - - - - - - -	10622	17,232,598 – 17,232,717	+	5	120	72.50	-1.82	0.40	0.731743
6530	3R_DroMel_CAF1	17,234,201 – 17,234,379	- - - - - - - - -	10623	17,234,201 – 17,234,299	+	5	120	76.35	-2.03	0.74	0.981156
				10624	17,234,201 – 17,234,299	-	5	120	76.35	-1.28	0.70	0.545259
				10625	17,234,219 – 17,234,339	+	5	120	79.36	-3.64	0.71	0.999440
				10626	17,234,219 – 17,234,339	-	5	120	79.36	-2.47	0.69	0.985852
				10627	17,234,259 – 17,234,379	+	3	120	78.27	-2.33	0.64	0.969696
				10628	17,234,259 – 17,234,379	-	3	120	78.27	-2.33	0.57	0.860319
6531	3R_DroMel_CAF1	17,238,585 – 17,238,702	- - - - - - - - -	10629	17,238,585 – 17,238,702	-	6	120	77.91	-1.90	0.54	0.728355
6532	3R_DroMel_CAF1	17,238,983 – 17,239,076	- - - - - - - - -	10630	17,238,983 – 17,239,076	+	6	120	74.77	-1.24	0.64	0.635917
6533	3R_DroMel_CAF1	17,240,847 – 17,240,939	- - - - - - - - -	10631	17,240,847 – 17,240,939	+	5	107	81.36	-1.60	0.83	0.725916
6533	3R_DroMel_CAF1	17,240,847 – 17,240,939	- - - - - - - - -	10632	17,240,847 – 17,240,939	-	5	107	81.36	-1.95	0.74	0.870251
6534	3R_DroMel_CAF1	17,242,600 – 17,242,702	- - - - - - - - -	10633	17,242,600 – 17,242,702	+	5	111	88.83	-1.57	0.86	0.833248
6534	3R_DroMel_CAF1	17,242,600 – 17,242,702	- - - - - - - - -	10634	17,242,600 – 17,242,702	-	5	111	88.83	-1.86	0.87	0.961854
6535	3R_DroMel_CAF1	17,243,739 – 17,243,873	- - - - - - - - -	10635	17,243,739 – 17,243,833	+	4	94	75.68	-1.83	0.58	0.697029
				10636	17,243,765 – 17,243,873	+	5	120	74.03	-1.83	0.43	0.700705
				10637	17,243,765 – 17,243,873	-	5	120	74.03	-1.92	0.40	0.812687
6536	3R_DroMel_CAF1	17,244,207 – 17,244,367	- - - - - - - - -	10638	17,244,207 – 17,244,327	+	6	120	97.44	-1.36	0.95	0.969854
				10639	17,244,247 – 17,244,367	+	6	120	96.89	-1.85	0.97	0.998926
				10640	17,244,247 – 17,244,367	-	6	120	96.89	-1.33	0.94	0.954572
6537	3R_DroMel_CAF1	17,244,488 – 17,244,585	- - - - - - - - -	10641	17,244,488 – 17,244,585	+	5	102	94.96	-2.50	0.73	0.632417
6538	3R_DroMel_CAF1	17,245,272 – 17,245,391	- - - - - - - - -	10642	17,245,272 – 17,245,391	-	6	120	95.98	-1.19	0.92	0.784635
6539	3R_DroMel_CAF1	17,246,554 – 17,246,674	- - - - - - - - -	10643	17,246,554 – 17,246,674	-	6	120	92.79	-1.36	0.86	0.500000
6540	3R_DroMel_CAF1	17,246,750 – 17,246,974	- - - - - - - - -	10644	17,246,750 – 17,246,863	+	3	113	88.20	-2.09	0.81	0.686980
6540	3R_DroMel_CAF1	17,246,750 – 17,246,974	- - - - - - - - -	10645	17,246,863 – 17,246,974	-	5	116	75.49	-1.61	0.07	0.792461
6541	3R_DroMel_CAF1	17,247,211 – 17,247,311	- - - - - - - - -	10646	17,247,211 – 17,247,311	+	6	120	90.00	-2.19	0.95	0.997976
6542	3R_DroMel_CAF1	17,247,784 – 17,247,876	- - - - - - - - -	10647	17,247,784 – 17,247,876	+	5	98	76.99	-2.36	0.57	0.981133
6542	3R_DroMel_CAF1	17,247,784 – 17,247,876	- - - - - - - - -	10648	17,247,784 – 17,247,876	-	5	98	76.99	-1.81	0.65	0.865378
6543	3R_DroMel_CAF1	17,248,105 – 17,248,265	- - "RNAmicro=f:17248165_t:17248284_strand:+_p:0.983364" - - - - - -	10649	17,248,105 – 17,248,205	-	5	115	87.17	-1.95	0.79	0.886846
6543	3R_DroMel_CAF1	17,248,105 – 17,248,265		10650	17,248,165 – 17,248,265	-	6	120	84.93	-2.39	0.80	0.827795
6544	3R_DroMel_CAF1	17,249,458 – 17,249,725	- - - - - - - - -	10651	17,249,458 – 17,249,576	-	5	120	90.60	-1.44	0.82	0.659229
				10652	17,249,498 – 17,249,614	+	3	118	85.55	-3.28	0.85	0.981944
				10653	17,249,498 – 17,249,614	-	3	118	85.55	-2.09	0.88	0.910102
				10654	17,249,538 – 17,249,654	+	3	118	86.71	-1.68	0.84	0.589601
				10655	17,249,538 – 17,249,654	-	3	118	86.71	-1.66	0.87	0.659374
				10656	17,249,576 – 17,249,694	-	5	120	87.42	-2.08	0.92	0.992290
				10657	17,249,614 – 17,249,725	-	5	120	91.26	-1.88	0.88	0.984682
6545	3R_DroMel_CAF1	17,251,354 – 17,251,470	- - - - - - - - -	10658	17,251,354 – 17,251,470	-	5	117	92.97	-1.72	0.90	0.984027
6546	3R_DroMel_CAF1	17,252,430 – 17,252,543	- - - - - - - - -	10659	17,252,430 – 17,252,543	+	6	120	82.33	-1.71	0.72	0.661578
6547	3R_DroMel_CAF1	17,252,708 – 17,252,818	- - - - - - - - -	10660	17,252,708 – 17,252,818	+	5	116	88.18	-1.82	0.79	0.829999
6548	3R_DroMel_CAF1	17,253,295 – 17,253,393	- - - - - - - - -	10661	17,253,295 – 17,253,393	-	6	120	76.14	-1.36	0.60	0.538466
6549	3R_DroMel_CAF1	17,254,052 – 17,254,160	- - - - - - - - -	10662	17,254,052 – 17,254,160	+	5	111	92.85	-2.24	0.80	0.961786
6549	3R_DroMel_CAF1	17,254,052 – 17,254,160	- - - - - - - - -	10663	17,254,052 – 17,254,160	-	5	111	92.85	-2.55	0.77	0.961840
6550	3R_DroMel_CAF1	17,254,957 – 17,255,152	- - - - - - - - -	10664	17,254,957 – 17,255,073	-	6	120	91.76	-1.22	0.89	0.563874
6550	3R_DroMel_CAF1	17,254,957 – 17,255,152	- - - - - - - - -	10665	17,255,033 – 17,255,152	+	5	120	76.30	-2.19	0.52	0.947219
6551	3R_DroMel_CAF1	17,259,007 – 17,259,126	- - - "knownCDS=Parent=FBtr0084092;Name=lbl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6570-RA" - - - - -	10666	17,259,007 – 17,259,126	-	6	120	79.16	-2.63	0.52	0.923989
6552	3R_DroMel_CAF1	17,259,265 – 17,259,379	- - - "knownCDS=Parent=FBtr0084092;Name=lbl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6570-RA" - - - - -	10667	17,259,265 – 17,259,379	-	6	120	89.08	-2.20	0.79	0.553787
6553	3R_DroMel_CAF1	17,259,998 – 17,260,118	- - - - - - - - -	10668	17,259,998 – 17,260,118	-	4	120	92.77	-1.53	0.81	0.510067
6554	3R_DroMel_CAF1	17,262,951 – 17,263,143	- - "RNAmicro=f:17262951_t:17263069_strand:+_p:0.988224" - - - - - -	10669	17,262,951 – 17,263,063	+	6	119	93.47	-2.98	0.86	0.993601
				10670	17,262,951 – 17,263,063	-	6	119	93.47	-2.94	0.88	0.998169
				10671	17,262,991 – 17,263,103	-	6	119	94.05	-1.53	0.87	0.705011
				10672	17,263,023 – 17,263,143	-	6	120	98.22	-0.72	0.97	0.547006
6555	3R_DroMel_CAF1	17,263,203 – 17,263,308	- - - - - - - - -	10673	17,263,203 – 17,263,308	-	6	120	85.47	-1.54	0.85	0.591585
6556	3R_DroMel_CAF1	17,264,569 – 17,264,678	- - - - - - - - -	10674	17,264,569 – 17,264,678	+	6	120	92.37	-1.59	0.85	0.603801
6557	3R_DroMel_CAF1	17,266,311 – 17,266,429	- - - - - - - - -	10675	17,266,311 – 17,266,429	-	5	120	92.26	-1.69	0.76	0.627918
6558	3R_DroMel_CAF1	17,267,472 – 17,267,570	- - - - - - - - -	10676	17,267,472 – 17,267,570	+	6	103	79.13	-2.08	0.63	0.896499
6558	3R_DroMel_CAF1	17,267,472 – 17,267,570	- - - - - - - - -	10677	17,267,472 – 17,267,570	-	6	103	79.13	-1.44	0.70	0.763520
6559	3R_DroMel_CAF1	17,270,833 – 17,270,950	- - - "knownCDS=Parent=FBtr0084091;Name=lbe-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6545-RA" - - - - -	10678	17,270,833 – 17,270,950	+	5	117	92.22	-2.14	0.82	0.975650
6559	3R_DroMel_CAF1	17,270,833 – 17,270,950		10679	17,270,833 – 17,270,950	-	5	117	92.22	-2.28	0.89	0.998703
6560	3R_DroMel_CAF1	17,279,091 – 17,279,205	- - - - - - - - -	10680	17,279,091 – 17,279,205	-	3	114	83.59	-2.49	0.58	0.536286
6561	3R_DroMel_CAF1	17,281,366 – 17,281,463	- - - - - - - - -	10681	17,281,366 – 17,281,463	+	5	103	71.91	-2.14	0.28	0.962388
6561	3R_DroMel_CAF1	17,281,366 – 17,281,463	- - - - - - - - -	10682	17,281,366 – 17,281,463	-	5	103	71.91	-2.09	0.31	0.947019
6562	3R_DroMel_CAF1	17,290,999 – 17,291,091	- - - - - - - - -	10683	17,290,999 – 17,291,091	+	3	94	88.65	-3.03	0.76	0.878045
6563	3R_DroMel_CAF1	17,291,588 – 17,291,679	- - - - - - - - -	10684	17,291,588 – 17,291,679	+	6	100	80.88	-1.54	0.65	0.599711
6564	3R_DroMel_CAF1	17,292,808 – 17,292,900	- - - - - - - - -	10685	17,292,808 – 17,292,900	+	3	92	94.07	-1.88	0.85	0.500000
6565	3R_DroMel_CAF1	17,293,995 – 17,294,098	- - - - - - - - -	10686	17,293,995 – 17,294,098	-	6	108	81.45	-1.94	0.66	0.743574
6566	3R_DroMel_CAF1	17,297,699 – 17,297,809	- - - - - - - - -	10687	17,297,699 – 17,297,809	+	6	113	74.38	-0.89	0.75	0.753012
6567	3R_DroMel_CAF1	17,298,493 – 17,298,585	- - - - - - - - -	10688	17,298,493 – 17,298,585	-	6	109	78.87	-1.66	0.78	0.899858
6568	3R_DroMel_CAF1	17,299,830 – 17,299,945	- - - - - - - - -	10689	17,299,830 – 17,299,945	-	5	120	74.47	-1.81	0.29	0.744278
6569	3R_DroMel_CAF1	17,300,673 – 17,300,768	- - - - - - - - -	10690	17,300,673 – 17,300,768	+	6	99	72.14	-1.97	0.43	0.826297
6570	3R_DroMel_CAF1	17,304,665 – 17,304,768	- - - - - - - - -	10691	17,304,665 – 17,304,768	-	5	104	79.94	-1.50	0.72	0.579825
6571	3R_DroMel_CAF1	17,306,491 – 17,306,583	- - - - - - - - -	10692	17,306,491 – 17,306,583	+	6	101	80.49	-2.05	0.72	0.888552
6572	3R_DroMel_CAF1	17,307,679 – 17,307,793	- - - - - - - - -	10693	17,307,679 – 17,307,793	+	5	117	76.07	-1.84	0.56	0.762310
6573	3R_DroMel_CAF1	17,311,667 – 17,311,784	- - - "knownCDS=Parent=FBtr0084109;Name=CG7922-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7922-RA" - - - - -	10694	17,311,667 – 17,311,784	+	6	120	80.62	-2.01	0.57	0.646794
6574	3R_DroMel_CAF1	17,311,889 – 17,312,028	- - - "knownCDS=Parent=FBtr0084109;Name=CG7922-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7922-RA" - - - - -	10695	17,311,889 – 17,311,997	-	6	108	85.06	-3.15	0.65	0.596228
6574	3R_DroMel_CAF1	17,311,889 – 17,312,028		10696	17,311,929 – 17,312,028	-	6	102	82.27	-2.61	0.66	0.832789
6575	3R_DroMel_CAF1	17,313,471 – 17,313,589	- - - - - - - - -	10697	17,313,471 – 17,313,589	+	5	120	74.12	-3.00	0.37	0.999520
6575	3R_DroMel_CAF1	17,313,471 – 17,313,589	- - - - - - - - -	10698	17,313,471 – 17,313,589	-	5	120	74.12	-3.25	0.36	0.999791
6576	3R_DroMel_CAF1	17,313,663 – 17,313,778	- - - - - - - - -	10699	17,313,663 – 17,313,778	-	3	120	86.32	-1.98	0.87	0.837414
6577	3R_DroMel_CAF1	17,319,086 – 17,319,304	- - - - - - - - -	10700	17,319,086 – 17,319,202	+	5	120	95.64	-2.46	0.83	0.989586
				10701	17,319,086 – 17,319,202	-	5	120	95.64	-2.28	0.91	0.999149
				10702	17,319,126 – 17,319,240	-	6	118	96.08	-1.76	0.90	0.961867
				10703	17,319,202 – 17,319,304	+	4	102	82.49	-1.62	0.70	0.609528
				10704	17,319,202 – 17,319,304	-	4	102	82.49	-1.71	0.69	0.665190
6578	3R_DroMel_CAF1	17,322,743 – 17,322,835	- - - - - - - - -	10705	17,322,743 – 17,322,835	-	5	92	80.74	-1.95	0.52	0.535967
6579	3R_DroMel_CAF1	17,323,660 – 17,323,758	- - - - - - - - -	10706	17,323,660 – 17,323,758	+	5	105	83.77	-3.24	0.57	0.957889
6579	3R_DroMel_CAF1	17,323,660 – 17,323,758	- - - - - - - - -	10707	17,323,660 – 17,323,758	-	5	105	83.77	-2.68	0.62	0.917869
6580	3R_DroMel_CAF1	17,325,284 – 17,325,379	- - - "knownCDS=Parent=FBtr0084110;Name=CG31179-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31179-RA" - - - - -	10708	17,325,284 – 17,325,379	+	6	118	82.37	-1.76	0.63	0.516782
6581	3R_DroMel_CAF1	17,329,344 – 17,329,513	- - - - - - - - -	10709	17,329,344 – 17,329,442	+	5	104	90.24	-1.45	0.78	0.526931
6581	3R_DroMel_CAF1	17,329,344 – 17,329,513	- - - - - - - - -	10710	17,329,423 – 17,329,513	-	5	108	71.21	-2.08	0.34	0.943235
6582	3R_DroMel_CAF1	17,330,555 – 17,330,656	- - - - - - - - -	10711	17,330,555 – 17,330,656	+	6	120	78.62	-1.49	0.64	0.697577
6583	3R_DroMel_CAF1	17,333,527 – 17,333,815	- - - - - - - - -	10712	17,333,527 – 17,333,634	+	6	120	77.96	-2.12	0.55	0.880669
				10713	17,333,527 – 17,333,634	-	6	120	77.96	-1.69	0.77	0.928551
				10714	17,333,554 – 17,333,672	+	5	120	74.87	-2.20	0.51	0.968094
				10715	17,333,554 – 17,333,672	-	5	120	74.87	-2.96	0.52	0.999395
				10716	17,333,594 – 17,333,699	-	6	108	88.39	-2.91	0.79	0.848520
				10717	17,333,699 – 17,333,815	-	6	120	78.43	-1.88	0.58	0.783005
6584	3R_DroMel_CAF1	17,334,329 – 17,334,563	- - - - - - - - -	10718	17,334,329 – 17,334,429	+	6	113	73.23	-2.60	0.39	0.982732
				10719	17,334,366 – 17,334,469	-	4	110	82.34	-2.27	0.73	0.951705
				10720	17,334,469 – 17,334,563	+	6	113	73.65	-2.30	0.55	0.985386
				10721	17,334,469 – 17,334,563	-	6	113	73.65	-2.41	0.56	0.990777
6585	3R_DroMel_CAF1	17,334,603 – 17,334,706	- - - - - - - - -	10722	17,334,603 – 17,334,706	+	6	120	76.46	-1.76	0.56	0.762713
6586	3R_DroMel_CAF1	17,334,778 – 17,334,872	- - - - - - - - -	10723	17,334,778 – 17,334,872	-	6	120	78.41	-1.71	0.58	0.658170
6587	3R_DroMel_CAF1	17,335,032 – 17,335,133	- - - - - - - - -	10724	17,335,032 – 17,335,133	+	5	101	83.32	-1.98	0.72	0.816339
6588	3R_DroMel_CAF1	17,340,069 – 17,340,169	- - - - - - - - -	10725	17,340,069 – 17,340,169	+	6	100	96.47	-1.18	0.91	0.762586
6588	3R_DroMel_CAF1	17,340,069 – 17,340,169	- - - - - - - - -	10726	17,340,069 – 17,340,169	-	6	100	96.47	-1.57	0.85	0.607164
6589	3R_DroMel_CAF1	17,341,025 – 17,341,139	- - - - - - - - -	10727	17,341,025 – 17,341,139	+	6	116	82.55	-2.54	0.79	0.904079
6590	3R_DroMel_CAF1	17,344,332 – 17,344,429	- - - - - - - - -	10728	17,344,332 – 17,344,429	-	3	120	75.67	-2.00	0.59	0.891373
6591	3R_DroMel_CAF1	17,345,320 – 17,345,475	- - - - - - - - -	10729	17,345,320 – 17,345,435	+	3	120	92.13	-2.11	0.87	0.737834
6591	3R_DroMel_CAF1	17,345,320 – 17,345,475	- - - - - - - - -	10730	17,345,355 – 17,345,475	+	3	120	92.22	-2.17	0.85	0.715015
6592	3R_DroMel_CAF1	17,346,036 – 17,346,143	- - - - - - - - -	10731	17,346,036 – 17,346,143	+	3	120	80.69	-3.47	0.67	0.996743
6592	3R_DroMel_CAF1	17,346,036 – 17,346,143	- - - - - - - - -	10732	17,346,036 – 17,346,143	-	3	120	80.69	-2.73	0.80	0.992697
6593	3R_DroMel_CAF1	17,347,730 – 17,347,966	- - - - - - - - -	10733	17,347,730 – 17,347,825	-	3	96	81.88	-1.76	0.71	0.665915
				10734	17,347,825 – 17,347,926	+	3	101	89.44	-2.77	0.90	0.966737
				10735	17,347,825 – 17,347,926	-	3	101	89.44	-2.46	0.84	0.854578
				10736	17,347,846 – 17,347,966	+	3	120	90.83	-2.15	0.92	0.910404
6594	3R_DroMel_CAF1	17,355,061 – 17,355,180	- - - - - - - - -	10737	17,355,061 – 17,355,180	-	6	120	97.11	-1.30	0.94	0.951316
6595	3R_DroMel_CAF1	17,356,891 – 17,356,983	- - - - - - - - -	10738	17,356,891 – 17,356,983	+	6	104	79.18	-2.02	0.57	0.792277
6595	3R_DroMel_CAF1	17,356,891 – 17,356,983	- - - - - - - - -	10739	17,356,891 – 17,356,983	-	6	104	79.18	-1.44	0.77	0.823213
6596	3R_DroMel_CAF1	17,359,905 – 17,360,001	- - - - - - - - -	10740	17,359,905 – 17,360,001	+	6	102	79.33	-1.98	0.64	0.873945
6597	3R_DroMel_CAF1	17,361,723 – 17,361,817	- - - - - - - - -	10741	17,361,723 – 17,361,817	+	6	111	84.60	-1.92	0.85	0.797974
6597	3R_DroMel_CAF1	17,361,723 – 17,361,817	- - - - - - - - -	10742	17,361,723 – 17,361,817	-	6	111	84.60	-1.76	0.89	0.827562
6598	3R_DroMel_CAF1	17,363,997 – 17,364,133	- - - - - - - - -	10743	17,363,997 – 17,364,110	-	5	116	86.14	-2.28	0.68	0.806315
6598	3R_DroMel_CAF1	17,363,997 – 17,364,133	- - - - - - - - -	10744	17,364,033 – 17,364,133	-	5	103	83.19	-2.48	0.68	0.942799
6599	3R_DroMel_CAF1	17,364,756 – 17,364,855	- - - - - - - - -	10745	17,364,756 – 17,364,855	-	6	100	79.78	-1.54	0.70	0.778068
6600	3R_DroMel_CAF1	17,366,225 – 17,366,319	- - - - - - - - -	10746	17,366,225 – 17,366,319	-	6	110	75.53	-1.91	0.47	0.666369
6601	3R_DroMel_CAF1	17,367,115 – 17,367,211	- - - - - - - - -	10747	17,367,115 – 17,367,211	+	6	99	82.53	-1.78	0.92	0.883542
6602	3R_DroMel_CAF1	17,369,932 – 17,370,035	- - - - - - - - -	10748	17,369,932 – 17,370,035	+	6	120	81.94	-1.48	0.73	0.616326
6603	3R_DroMel_CAF1	17,370,089 – 17,370,215	- - - - - - - - -	10749	17,370,089 – 17,370,190	-	6	109	76.92	-2.04	0.45	0.628724
6603	3R_DroMel_CAF1	17,370,089 – 17,370,215	- - - - - - - - -	10750	17,370,119 – 17,370,215	-	6	112	80.54	-1.44	0.67	0.619786
6604	3R_DroMel_CAF1	17,373,994 – 17,374,084	- - - - - - - - -	10751	17,373,994 – 17,374,084	-	5	90	97.07	-1.12	0.96	0.583422
6605	3R_DroMel_CAF1	17,378,362 – 17,378,464	- - - - - - - - -	10752	17,378,362 – 17,378,464	+	4	106	85.10	-2.28	0.77	0.942170
6605	3R_DroMel_CAF1	17,378,362 – 17,378,464	- - - - - - - - -	10753	17,378,362 – 17,378,464	-	4	106	85.10	-2.12	0.73	0.888442
6606	3R_DroMel_CAF1	17,381,387 – 17,381,507	- - - "knownCDS=Parent=FBtr0084123;Name=slou-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6534-RA" - - - - -	10754	17,381,387 – 17,381,507	-	6	120	82.39	-2.04	0.63	0.616879
6607	3R_DroMel_CAF1	17,382,022 – 17,382,140	- - - "knownCDS=Parent=FBtr0084123;Name=slou-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6534-RA" - - - - -	10755	17,382,022 – 17,382,140	+	6	120	78.82	-1.92	0.62	0.861818
6608	3R_DroMel_CAF1	17,386,489 – 17,386,580	- - - - - - - - -	10756	17,386,489 – 17,386,580	-	6	103	79.26	-1.71	0.62	0.744432
6609	3R_DroMel_CAF1	17,386,788 – 17,386,899	- - - - - - - - -	10757	17,386,788 – 17,386,879	+	6	120	83.33	-1.83	0.69	0.566609
				10758	17,386,788 – 17,386,879	-	6	120	83.33	-1.34	0.83	0.500000
				10759	17,386,799 – 17,386,899	+	6	120	79.67	-1.96	0.62	0.822134
				10760	17,386,799 – 17,386,899	-	6	120	79.67	-1.44	0.64	0.603917
6610	3R_DroMel_CAF1	17,392,770 – 17,392,864	- - - - - - - - -	10761	17,392,770 – 17,392,864	+	5	97	74.95	-1.75	0.44	0.516226
6611	3R_DroMel_CAF1	17,396,188 – 17,396,308	- - - - - - - - -	10762	17,396,188 – 17,396,308	+	4	120	98.61	-2.17	0.99	0.880123
6612	3R_DroMel_CAF1	17,399,116 – 17,399,213	- - - "knownCDS=Parent=FBtr0084121;Name=InR-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18402-RA" - - - - -	10763	17,399,116 – 17,399,213	+	6	99	87.17	-1.69	0.82	0.531968
6613	3R_DroMel_CAF1	17,408,380 – 17,408,575	- - - - - - - - -	10764	17,408,380 – 17,408,500	+	5	120	90.66	-1.26	0.87	0.587408
				10765	17,408,420 – 17,408,540	+	5	120	94.19	-1.65	0.80	0.710779
				10766	17,408,460 – 17,408,575	+	5	115	95.67	-2.26	0.90	0.998632
6614	3R_DroMel_CAF1	17,410,201 – 17,410,306	- - - - - - - - -	10767	17,410,201 – 17,410,306	+	6	110	78.10	-2.05	0.49	0.661782
6615	3R_DroMel_CAF1	17,411,115 – 17,411,305	- - - - - - - - -	10768	17,411,115 – 17,411,205	-	6	116	75.69	-1.33	0.62	0.630985
6615	3R_DroMel_CAF1	17,411,115 – 17,411,305	- - - - - - - - -	10769	17,411,205 – 17,411,305	+	6	120	70.33	-1.33	0.62	0.800931
6616	3R_DroMel_CAF1	17,417,206 – 17,417,297	- - - - - - - - -	10770	17,417,206 – 17,417,297	+	6	116	79.33	-2.38	0.62	0.935969
6616	3R_DroMel_CAF1	17,417,206 – 17,417,297	- - - - - - - - -	10771	17,417,206 – 17,417,297	-	6	116	79.33	-1.49	0.78	0.837637
6617	3R_DroMel_CAF1	17,418,671 – 17,418,767	- - - - - - - - -	10772	17,418,671 – 17,418,767	-	4	99	84.27	-2.37	0.66	0.895435
6618	3R_DroMel_CAF1	17,421,566 – 17,421,679	- - - - - - - - -	10773	17,421,566 – 17,421,679	+	5	113	96.55	-2.19	0.95	0.999335
6618	3R_DroMel_CAF1	17,421,566 – 17,421,679	- - - - - - - - -	10774	17,421,566 – 17,421,679	-	5	113	96.55	-2.34	0.94	0.999571
6619	3R_DroMel_CAF1	17,421,759 – 17,421,850	- - - - - - - - -	10775	17,421,759 – 17,421,850	+	5	91	93.63	-2.44	0.98	0.999952
6619	3R_DroMel_CAF1	17,421,759 – 17,421,850	- - - - - - - - -	10776	17,421,759 – 17,421,850	-	5	91	93.63	-1.63	0.92	0.981324
6620	3R_DroMel_CAF1	17,422,350 – 17,422,454	- - - - - - - - -	10777	17,422,350 – 17,422,454	+	5	104	87.38	-3.04	0.97	0.999936
6620	3R_DroMel_CAF1	17,422,350 – 17,422,454	- - - - - - - - -	10778	17,422,350 – 17,422,454	-	5	104	87.38	-2.60	0.94	0.999511
6621	3R_DroMel_CAF1	17,422,508 – 17,422,604	- - - - - - - - -	10779	17,422,508 – 17,422,604	+	5	96	93.02	-1.99	0.81	0.944933
6621	3R_DroMel_CAF1	17,422,508 – 17,422,604	- - - - - - - - -	10780	17,422,508 – 17,422,604	-	5	96	93.02	-1.65	0.93	0.987466
6622	3R_DroMel_CAF1	17,423,365 – 17,423,482	- - - - - - - - -	10781	17,423,365 – 17,423,462	+	5	107	93.21	-1.95	0.95	0.998736
6622	3R_DroMel_CAF1	17,423,365 – 17,423,482	- - - - - - - - -	10782	17,423,389 – 17,423,482	+	5	101	92.72	-2.01	0.92	0.998362
6623	3R_DroMel_CAF1	17,424,773 – 17,424,874	- - - - - - - - -	10783	17,424,773 – 17,424,874	-	3	103	92.51	-2.06	0.85	0.660932
6624	3R_DroMel_CAF1	17,424,904 – 17,425,005	- - - - - - - - -	10784	17,424,904 – 17,425,005	+	3	101	88.45	-1.90	0.83	0.613331
6625	3R_DroMel_CAF1	17,425,365 – 17,425,463	- - - - - - - - -	10785	17,425,365 – 17,425,463	-	5	98	94.90	-1.19	0.94	0.770051
6626	3R_DroMel_CAF1	17,426,763 – 17,426,881	- - - - - - - - -	10786	17,426,763 – 17,426,881	+	5	120	87.23	-2.99	0.76	0.989284
6626	3R_DroMel_CAF1	17,426,763 – 17,426,881	- - - - - - - - -	10787	17,426,763 – 17,426,881	-	5	120	87.23	-1.72	0.74	0.643079
6627	3R_DroMel_CAF1	17,427,921 – 17,428,030	- - - - - - - - -	10788	17,427,921 – 17,428,030	-	3	110	88.15	-2.20	0.70	0.530292
6628	3R_DroMel_CAF1	17,430,306 – 17,430,502	- - - - - - - - -	10789	17,430,306 – 17,430,404	+	3	98	98.64	-1.48	0.99	0.623647
				10790	17,430,338 – 17,430,441	-	5	105	94.73	-2.76	0.82	0.995396
				10791	17,430,404 – 17,430,502	-	5	108	87.02	-1.65	0.79	0.692523
6629	3R_DroMel_CAF1	17,432,053 – 17,432,161	- - - - - - - - -	10792	17,432,053 – 17,432,161	-	5	120	79.60	-1.95	0.46	0.518184
6630	3R_DroMel_CAF1	17,432,843 – 17,432,989	- - - - - - - - -	10793	17,432,843 – 17,432,949	-	5	107	96.62	-1.87	0.96	0.997143
6630	3R_DroMel_CAF1	17,432,843 – 17,432,989	- - - - - - - - -	10794	17,432,876 – 17,432,989	-	5	114	93.30	-1.61	0.85	0.902811
6631	3R_DroMel_CAF1	17,433,832 – 17,433,951	- - - - - - - - -	10795	17,433,832 – 17,433,951	+	5	120	90.03	-2.52	0.79	0.981533
6631	3R_DroMel_CAF1	17,433,832 – 17,433,951	- - - - - - - - -	10796	17,433,832 – 17,433,951	-	5	120	90.03	-1.66	0.75	0.605223
6632	3R_DroMel_CAF1	17,439,398 – 17,439,504	- - - - - - - - -	10797	17,439,398 – 17,439,504	-	5	106	94.06	-1.87	0.84	0.961809
6633	3R_DroMel_CAF1	17,440,967 – 17,441,114	- - - - - - - - -	10798	17,440,967 – 17,441,086	-	5	119	95.11	-1.34	0.95	0.926081
				10799	17,441,006 – 17,441,114	+	5	108	95.35	-1.90	0.87	0.981924
				10800	17,441,006 – 17,441,114	-	5	108	95.35	-2.67	0.79	0.969336
6634	3R_DroMel_CAF1	17,441,953 – 17,442,056	- - - - - - - - -	10801	17,441,953 – 17,442,056	+	5	104	88.31	-2.17	0.68	0.651179
6634	3R_DroMel_CAF1	17,441,953 – 17,442,056	- - - - - - - - -	10802	17,441,953 – 17,442,056	-	5	104	88.31	-2.13	0.88	0.990023
6635	3R_DroMel_CAF1	17,442,221 – 17,442,311	- - - - - - - - -	10803	17,442,221 – 17,442,311	-	6	100	81.64	-1.66	0.69	0.663134
6636	3R_DroMel_CAF1	17,443,459 – 17,443,594	- - - - - - - - -	10804	17,443,459 – 17,443,563	+	5	120	80.03	-1.88	0.53	0.536855
				10805	17,443,498 – 17,443,594	+	5	120	74.98	-2.45	0.52	0.992710
				10806	17,443,498 – 17,443,594	-	5	120	74.98	-2.08	0.50	0.930424
6637	3R_DroMel_CAF1	17,444,613 – 17,444,708	- - - - - - - - -	10807	17,444,613 – 17,444,708	+	6	99	80.15	-2.18	0.59	0.827588
6638	3R_DroMel_CAF1	17,444,988 – 17,445,102	- - - - - - - - -	10808	17,444,988 – 17,445,102	-	5	120	91.46	-1.56	0.83	0.811147
6639	3R_DroMel_CAF1	17,446,192 – 17,446,306	- - - - - - - - -	10809	17,446,192 – 17,446,306	-	5	114	89.89	-1.98	0.76	0.842902
6640	3R_DroMel_CAF1	17,446,880 – 17,446,991	- - - - - - - - -	10810	17,446,880 – 17,446,991	+	5	111	95.14	-1.61	0.87	0.924092
6641	3R_DroMel_CAF1	17,448,183 – 17,448,283	"known=stem_loop ID=Dmel\CG_RFAM_MIR_48002342;Name=dme-mir-11" - - - - - "miRBase=dme-mir-11\|4e-32" - -	10811	17,448,183 – 17,448,283	-	6	106	79.92	-1.65	0.71	0.811626
6642	3R_DroMel_CAF1	17,449,290 – 17,449,386	- - - "knownCDS=Parent=FBtr0084117, FBtr0084118, FBtr0084119;Name=E2f-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6376-RB, FlyBase+Annotation+IDs:CG6376-RC, FlyBase+Annotation+IDs:CG6376-RA" - - - - -	10812	17,449,290 – 17,449,386	-	6	120	70.92	-1.09	0.65	0.654675
6643	3R_DroMel_CAF1	17,452,741 – 17,452,838	- - - - - - - - -	10813	17,452,741 – 17,452,838	+	5	97	87.53	-2.24	0.70	0.791790
6644	3R_DroMel_CAF1	17,453,166 – 17,453,260	- - - - - - - - -	10814	17,453,166 – 17,453,260	+	5	99	81.71	-1.92	0.62	0.679059
6645	3R_DroMel_CAF1	17,459,364 – 17,459,465	- - - - - - - - -	10815	17,459,364 – 17,459,465	+	5	101	95.64	-1.43	0.95	0.955760
6646	3R_DroMel_CAF1	17,459,562 – 17,459,699	- - - - - - - - -	10816	17,459,562 – 17,459,659	+	5	99	95.71	-1.70	0.88	0.953319
6646	3R_DroMel_CAF1	17,459,562 – 17,459,699	- - - - - - - - -	10817	17,459,595 – 17,459,699	+	5	106	94.85	-2.25	0.85	0.993768
6647	3R_DroMel_CAF1	17,460,517 – 17,460,734	- - - - - - - - -	10818	17,460,517 – 17,460,614	-	4	110	83.00	-2.21	0.63	0.831958
6647	3R_DroMel_CAF1	17,460,517 – 17,460,734	- - - - - - - - -	10819	17,460,614 – 17,460,734	-	5	120	93.42	-1.46	0.85	0.813398
6648	3R_DroMel_CAF1	17,468,785 – 17,468,941	- - - - - - - - -	10820	17,468,785 – 17,468,882	+	5	97	86.49	-1.60	0.72	0.518954
				10821	17,468,849 – 17,468,941	+	6	95	73.65	-1.62	0.60	0.858997
				10822	17,468,849 – 17,468,941	-	6	95	73.65	-1.95	0.50	0.883557
6649	3R_DroMel_CAF1	17,470,255 – 17,470,345	- - - - - - - - -	10823	17,470,255 – 17,470,345	-	6	104	83.00	-2.28	0.72	0.773936
6650	3R_DroMel_CAF1	17,470,889 – 17,470,987	- - - - - - - - -	10824	17,470,889 – 17,470,987	-	5	98	90.51	-1.34	0.81	0.507064
6651	3R_DroMel_CAF1	17,471,836 – 17,471,927	- - - - - - - - -	10825	17,471,836 – 17,471,927	+	5	91	98.46	-1.26	0.92	0.529410
6652	3R_DroMel_CAF1	17,478,590 – 17,478,682	- - - - - - - - -	10826	17,478,590 – 17,478,682	+	6	109	80.62	-1.30	0.80	0.667596
6653	3R_DroMel_CAF1	17,479,149 – 17,479,252	- - - - - - - - -	10827	17,479,149 – 17,479,252	-	6	117	72.13	-1.93	0.35	0.545460
6654	3R_DroMel_CAF1	17,480,443 – 17,480,559	- - - - - - - - -	10828	17,480,443 – 17,480,559	+	5	116	98.10	-1.73	0.98	0.988937
6654	3R_DroMel_CAF1	17,480,443 – 17,480,559	- - - - - - - - -	10829	17,480,443 – 17,480,559	-	5	116	98.10	-1.62	0.97	0.972869
6655	3R_DroMel_CAF1	17,482,489 – 17,482,594	- - - - - - - - -	10830	17,482,489 – 17,482,594	-	6	118	79.94	-2.38	0.51	0.759912
6656	3R_DroMel_CAF1	17,484,685 – 17,484,779	- - - - - - - - -	10831	17,484,685 – 17,484,779	+	6	98	76.92	-2.18	0.49	0.848253
6657	3R_DroMel_CAF1	17,485,685 – 17,485,783	- - - - - - - - -	10832	17,485,685 – 17,485,783	+	6	109	77.42	-1.30	0.67	0.712228
6658	3R_DroMel_CAF1	17,486,588 – 17,486,715	- - - - - - - - -	10833	17,486,588 – 17,486,687	+	5	99	88.63	-2.18	0.68	0.606457
6658	3R_DroMel_CAF1	17,486,588 – 17,486,715	- - - - - - - - -	10834	17,486,612 – 17,486,715	+	5	103	90.05	-2.06	0.79	0.931597
6659	3R_DroMel_CAF1	17,508,341 – 17,508,454	- - - - - - - - -	10835	17,508,341 – 17,508,454	+	5	114	87.14	-1.63	0.75	0.607664
6660	3R_DroMel_CAF1	17,509,528 – 17,509,618	- - - - - - - - -	10836	17,509,528 – 17,509,618	+	5	105	77.71	-1.75	-0.00	0.812347
6661	3R_DroMel_CAF1	17,510,246 – 17,510,337	- - - - - - - - -	10837	17,510,246 – 17,510,337	-	6	92	76.06	-1.40	0.59	0.521825
6662	3R_DroMel_CAF1	17,517,221 – 17,517,322	- - - - - - - - -	10838	17,517,221 – 17,517,322	-	5	115	69.76	-2.15	0.27	0.938918
6663	3R_DroMel_CAF1	17,526,591 – 17,526,709	- - - - - - - - -	10839	17,526,591 – 17,526,709	+	6	118	77.53	-1.28	0.90	0.856577
6664	3R_DroMel_CAF1	17,526,786 – 17,526,902	- - - - - - - - -	10840	17,526,786 – 17,526,902	+	4	116	82.76	-1.50	0.76	0.554064
6665	3R_DroMel_CAF1	17,529,355 – 17,529,456	- - - - - - - - -	10841	17,529,355 – 17,529,456	+	5	101	79.24	-2.44	0.77	0.989172
6666	3R_DroMel_CAF1	17,533,033 – 17,533,125	- - - - - - - - -	10842	17,533,033 – 17,533,125	+	6	92	96.88	-1.43	0.89	0.782082
6667	3R_DroMel_CAF1	17,536,697 – 17,536,797	- - - - - - - - -	10843	17,536,697 – 17,536,797	+	6	115	80.70	-1.54	0.68	0.685138
6668	3R_DroMel_CAF1	17,536,883 – 17,536,977	- - - - - - - - -	10844	17,536,883 – 17,536,977	+	6	107	64.37	-2.42	0.18	0.570510
6669	3R_DroMel_CAF1	17,544,877 – 17,545,031	- - - "knownCDS=Parent=FBtr0084114;Name=CG31176-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31176-RA" - - - - -	10845	17,544,877 – 17,544,991	-	5	114	97.72	-2.59	0.92	0.999253
6669	3R_DroMel_CAF1	17,544,877 – 17,545,031		10846	17,544,914 – 17,545,031	-	6	120	81.95	-1.58	0.69	0.611063
6670	3R_DroMel_CAF1	17,547,081 – 17,547,172	- - - - - - - - -	10847	17,547,081 – 17,547,172	-	5	91	89.23	-1.48	0.76	0.508501
6671	3R_DroMel_CAF1	17,548,737 – 17,548,851	- - - - - - - - -	10848	17,548,737 – 17,548,851	-	6	120	85.35	-2.92	0.66	0.521473
6672	3R_DroMel_CAF1	17,551,035 – 17,551,141	- - - - - - - - -	10849	17,551,035 – 17,551,141	-	5	120	79.33	-1.81	0.56	0.568117
6673	3R_DroMel_CAF1	17,554,580 – 17,554,700	- - - - - - - - -	10850	17,554,580 – 17,554,700	+	4	120	86.88	-2.29	0.79	0.938985
6674	3R_DroMel_CAF1	17,555,595 – 17,555,738	- - - - - - - - -	10851	17,555,595 – 17,555,705	+	3	120	92.00	-2.07	0.89	0.783879
				10852	17,555,595 – 17,555,705	-	3	120	92.00	-1.68	0.89	0.554061
				10853	17,555,635 – 17,555,738	+	3	120	84.26	-0.87	0.96	0.856223
6675	3R_DroMel_CAF1	17,556,865 – 17,556,984	- - - - - - - - -	10854	17,556,865 – 17,556,984	+	3	120	87.22	-2.67	0.62	0.522575
6676	3R_DroMel_CAF1	17,557,013 – 17,557,131	- - - - - - - - -	10855	17,557,013 – 17,557,131	-	3	119	93.82	-2.11	0.84	0.612310
6677	3R_DroMel_CAF1	17,560,919 – 17,561,062	- - - - - - - - -	10856	17,560,919 – 17,561,024	-	5	120	89.55	-1.64	0.74	0.578042
				10857	17,560,944 – 17,561,062	+	5	120	94.47	-1.43	0.88	0.860930
				10858	17,560,944 – 17,561,062	-	5	120	94.47	-2.95	0.96	0.999986
6678	3R_DroMel_CAF1	17,563,008 – 17,563,128	- - - - - - - - -	10859	17,563,008 – 17,563,128	+	5	120	87.42	-1.51	0.74	0.500000
6679	3R_DroMel_CAF1	17,563,287 – 17,563,398	- - - "knownCDS=texon3909;Parent=CG_NCBI_GNO_32471516, CG_BATZ_CON_47010467" - - - - -	10860	17,563,287 – 17,563,398	+	5	120	92.25	-1.46	0.91	0.923477
6679	3R_DroMel_CAF1	17,563,287 – 17,563,398		10861	17,563,287 – 17,563,398	-	5	120	92.25	-2.35	0.83	0.992574
6680	3R_DroMel_CAF1	17,570,991 – 17,571,101	- - - - - - - - -	10862	17,570,991 – 17,571,101	+	6	110	83.93	-1.80	0.70	0.500000
6681	3R_DroMel_CAF1	17,572,177 – 17,572,289	- - - "knownCDS=Parent=FBtr0084126;Name=CG31343-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31343-RA" - - - - -	10863	17,572,177 – 17,572,289	-	6	112	75.98	-1.50	0.58	0.617276
6682	3R_DroMel_CAF1	17,572,985 – 17,573,081	- - - - - - - - -	10864	17,572,985 – 17,573,081	+	3	96	76.56	-1.28	0.78	0.728749
6682	3R_DroMel_CAF1	17,572,985 – 17,573,081	- - - - - - - - -	10865	17,572,985 – 17,573,081	-	3	96	76.56	-1.38	0.74	0.726600
6683	3R_DroMel_CAF1	17,574,477 – 17,574,591	- - - "knownCDS=Parent=FBtr0084126;Name=CG31343-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31343-RA" - - - - -	10866	17,574,477 – 17,574,591	+	6	120	82.07	-1.86	0.66	0.650152
6684	3R_DroMel_CAF1	17,576,478 – 17,576,605	- - - - - - - - -	10867	17,576,478 – 17,576,574	+	5	97	82.57	-4.03	0.70	0.998725
				10868	17,576,478 – 17,576,574	-	5	97	82.57	-2.60	0.55	0.873168
				10869	17,576,509 – 17,576,605	+	5	97	81.74	-2.19	0.62	0.852338
6685	3R_DroMel_CAF1	17,577,128 – 17,577,231	- - - "knownCDS=Parent=FBtr0084127;Name=CG31233-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31233-RA" - - - - -	10870	17,577,128 – 17,577,231	+	6	118	75.55	-1.72	0.64	0.925309
6685	3R_DroMel_CAF1	17,577,128 – 17,577,231		10871	17,577,128 – 17,577,231	-	6	118	75.55	-1.72	0.61	0.880063
6686	3R_DroMel_CAF1	17,583,050 – 17,583,150	- - - "knownCDS=Parent=FBtr0084128;Name=CG31198-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31198-RA" - - - - -	10872	17,583,050 – 17,583,150	+	6	110	68.95	-1.56	0.52	0.777814
6687	3R_DroMel_CAF1	17,584,748 – 17,584,850	- - - "knownCDS=Parent=FBtr0084129;Name=CG31177-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31177-RA" - - - - -	10873	17,584,748 – 17,584,850	-	6	102	83.01	-1.80	0.72	0.631375
6688	3R_DroMel_CAF1	17,598,325 – 17,598,472	- - - - - - - - -	10874	17,598,325 – 17,598,432	+	6	114	85.55	-1.73	0.84	0.652765
6688	3R_DroMel_CAF1	17,598,325 – 17,598,472	- - - - - - - - -	10875	17,598,352 – 17,598,472	+	6	120	98.44	-4.96	0.95	0.999936
6689	3R_DroMel_CAF1	17,598,552 – 17,598,656	- - - - - - - - -	10876	17,598,552 – 17,598,656	+	6	110	77.51	-0.92	0.72	0.529397
6690	3R_DroMel_CAF1	17,599,148 – 17,599,247	- - - "knownCDS=Parent=FBtr0084167, FBtr0084168;Name=GABA-B-R2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6706-RA, FlyBase+Annotation+IDs:CG6706-RB" - - - - -	10877	17,599,148 – 17,599,247	-	6	115	77.00	-1.54	0.60	0.688865
6691	3R_DroMel_CAF1	17,601,276 – 17,601,379	- - - - - - - - -	10878	17,601,276 – 17,601,379	+	6	103	82.18	-2.21	0.62	0.678906
6692	3R_DroMel_CAF1	17,603,353 – 17,603,460	- - - "knownCDS=Parent=FBtr0084166;Name=RpI12-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13418-RA" - - - - -	10879	17,603,353 – 17,603,460	-	6	114	78.49	-1.53	0.61	0.648176
6693	3R_DroMel_CAF1	17,613,239 – 17,613,344	- - - - - - - - -	10880	17,613,239 – 17,613,344	-	5	120	72.45	-1.78	0.21	0.790846
6694	3R_DroMel_CAF1	17,613,487 – 17,613,589	- - "RNAmicro=f:17613487_t:17613592_strand:+_p:0.729950" "knownCDS=Parent=FBtr0084161, FBtr0084162, FBtr0084163;Name=Caki-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6703-RB, FlyBase+Annotation+IDs:CG6703-RA, FlyBase+Annotation+IDs:CG6703-RC" - - - - -	10881	17,613,487 – 17,613,589	+	6	106	80.38	-2.91	0.80	0.961608
6694	3R_DroMel_CAF1	17,613,487 – 17,613,589		10882	17,613,487 – 17,613,589	-	6	106	80.38	-1.90	0.62	0.751617
6695	3R_DroMel_CAF1	17,613,683 – 17,613,782	- - - "knownCDS=Parent=FBtr0084161, FBtr0084162, FBtr0084163;Name=Caki-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6703-RB, FlyBase+Annotation+IDs:CG6703-RA, FlyBase+Annotation+IDs:CG6703-RC" - - - - -	10883	17,613,683 – 17,613,782	-	6	101	78.19	-0.96	0.74	0.575787
6696	3R_DroMel_CAF1	17,615,659 – 17,615,753	- - - - - - - - -	10884	17,615,659 – 17,615,753	+	6	100	82.26	-2.81	0.51	0.639311
6697	3R_DroMel_CAF1	17,623,947 – 17,624,075	- - "RNAmicro=f:17623947_t:17624066_strand:+_p:0.999951" - - - - - -	10885	17,623,947 – 17,624,046	-	6	120	81.70	-3.84	0.89	0.980503
6697	3R_DroMel_CAF1	17,623,947 – 17,624,075		10886	17,623,966 – 17,624,075	-	6	118	78.90	-2.55	0.77	0.968994
6698	3R_DroMel_CAF1	17,629,716 – 17,629,812	- - - "knownCDS=Parent=FBtr0084162;Name=Caki-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6703-RA" - - - - -	10887	17,629,716 – 17,629,812	-	6	96	80.00	-1.55	0.74	0.802321
6699	3R_DroMel_CAF1	17,630,056 – 17,630,156	- - - - - - - - -	10888	17,630,056 – 17,630,156	-	4	111	87.99	-1.88	0.66	0.569016
6700	3R_DroMel_CAF1	17,631,617 – 17,631,742	- - - - - - - - -	10889	17,631,617 – 17,631,710	+	6	107	82.51	-2.84	0.71	0.883693
6700	3R_DroMel_CAF1	17,631,617 – 17,631,742	- - - - - - - - -	10890	17,631,645 – 17,631,742	+	6	101	81.21	-3.74	0.74	0.962486
6701	3R_DroMel_CAF1	17,632,896 – 17,633,003	- - - - - - - - -	10891	17,632,896 – 17,633,003	-	5	107	89.44	-1.67	0.88	0.931791
6702	3R_DroMel_CAF1	17,635,394 – 17,635,552	- - - - - - - - -	10892	17,635,394 – 17,635,512	+	5	120	96.70	-1.81	0.95	0.995226
6702	3R_DroMel_CAF1	17,635,394 – 17,635,552	- - - - - - - - -	10893	17,635,434 – 17,635,552	-	5	120	95.69	-1.99	0.80	0.846861
6703	3R_DroMel_CAF1	17,635,726 – 17,635,843	- - - - - - - - -	10894	17,635,726 – 17,635,843	+	4	117	96.15	-1.67	0.89	0.607334
6704	3R_DroMel_CAF1	17,637,185 – 17,637,311	- - - - - - - - -	10895	17,637,185 – 17,637,275	+	6	110	80.87	-1.95	0.64	0.769664
6704	3R_DroMel_CAF1	17,637,185 – 17,637,311	- - - - - - - - -	10896	17,637,219 – 17,637,311	+	6	112	82.97	-1.63	0.68	0.510838
6705	3R_DroMel_CAF1	17,638,512 – 17,638,639	- - - - - - - - -	10897	17,638,512 – 17,638,602	-	6	102	75.81	-2.00	0.49	0.814759
6705	3R_DroMel_CAF1	17,638,512 – 17,638,639	- - - - - - - - -	10898	17,638,534 – 17,638,639	-	5	110	78.91	-2.90	0.62	0.996511
6706	3R_DroMel_CAF1	17,640,016 – 17,640,107	- - - - - - - - -	10899	17,640,016 – 17,640,107	+	5	102	77.88	-1.80	0.71	0.891338
6707	3R_DroMel_CAF1	17,640,223 – 17,640,374	- - - - - - - - -	10900	17,640,223 – 17,640,334	-	3	111	90.33	-2.13	0.80	0.602843
6707	3R_DroMel_CAF1	17,640,223 – 17,640,374	- - - - - - - - -	10901	17,640,254 – 17,640,374	+	3	120	95.53	-1.94	0.87	0.572177
6708	3R_DroMel_CAF1	17,641,914 – 17,642,008	- - - - - - - - -	10902	17,641,914 – 17,642,008	-	6	113	86.13	-1.56	0.91	0.800275
6709	3R_DroMel_CAF1	17,642,236 – 17,642,349	- - - - - - - - -	10903	17,642,236 – 17,642,349	-	4	113	82.56	-1.53	0.69	0.521084
6710	3R_DroMel_CAF1	17,644,765 – 17,644,912	- - - "knownCDS=Parent=FBtr0084161;Name=Caki-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6703-RB" - - - - -	10904	17,644,765 – 17,644,879	+	6	120	77.48	-1.28	0.63	0.530908
6710	3R_DroMel_CAF1	17,644,765 – 17,644,912		10905	17,644,805 – 17,644,912	+	6	117	76.87	-2.82	0.51	0.987754
6711	3R_DroMel_CAF1	17,648,394 – 17,648,488	- - - - - - - - -	10906	17,648,394 – 17,648,488	+	5	95	89.72	-1.69	0.75	0.650453
6712	3R_DroMel_CAF1	17,653,362 – 17,653,462	- - - - - - - - -	10907	17,653,362 – 17,653,462	-	5	100	77.07	-2.02	0.53	0.857362
6713	3R_DroMel_CAF1	17,654,543 – 17,654,651	- - - - - - - - -	10908	17,654,543 – 17,654,651	+	6	110	81.29	-1.52	0.76	0.715281
6714	3R_DroMel_CAF1	17,655,022 – 17,655,112	- - - - - - - - -	10909	17,655,022 – 17,655,112	-	3	90	91.85	-1.60	0.92	0.612175
6715	3R_DroMel_CAF1	17,659,876 – 17,659,968	- - - - - - - - -	10910	17,659,876 – 17,659,968	+	6	97	91.25	-2.13	0.81	0.582505
6716	3R_DroMel_CAF1	17,661,778 – 17,661,873	- - - - - - - - -	10911	17,661,778 – 17,661,873	-	3	96	80.35	-2.02	0.65	0.807298
6717	3R_DroMel_CAF1	17,663,346 – 17,663,446	- - - - - - - - -	10912	17,663,346 – 17,663,446	-	6	106	82.44	-1.91	0.63	0.577970
6718	3R_DroMel_CAF1	17,672,469 – 17,672,581	- - - - - - - - -	10913	17,672,469 – 17,672,581	+	3	115	85.09	-2.22	0.64	0.553031
6719	3R_DroMel_CAF1	17,677,230 – 17,677,327	- - - - - - - - -	10914	17,677,230 – 17,677,327	+	6	98	82.47	-1.73	0.69	0.616609
6719	3R_DroMel_CAF1	17,677,230 – 17,677,327	- - - - - - - - -	10915	17,677,230 – 17,677,327	-	6	98	82.47	-1.58	0.66	0.515610
6720	3R_DroMel_CAF1	17,682,260 – 17,682,363	- - - - - - - - -	10916	17,682,260 – 17,682,363	+	3	106	85.62	-1.72	0.82	0.589665
6721	3R_DroMel_CAF1	17,693,274 – 17,693,376	- - - "knownCDS=Parent=FBtr0084155;Name=CG6569-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6569-RA" - - - - -	10917	17,693,274 – 17,693,376	+	6	102	81.24	-1.31	0.67	0.500000
6722	3R_DroMel_CAF1	17,701,578 – 17,701,683	- - - - - - - - -	10918	17,701,578 – 17,701,683	+	3	108	73.04	-2.31	0.51	0.892815
6723	3R_DroMel_CAF1	17,707,367 – 17,707,477	- - - "knownCDS=Parent=FBtr0084147;Name=CG31465-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31465-RA" - - - - -	10919	17,707,367 – 17,707,477	-	5	110	83.09	-2.46	0.64	0.907491
6724	3R_DroMel_CAF1	17,713,310 – 17,713,409	- - - - - - - - -	10920	17,713,310 – 17,713,409	-	5	99	88.79	-2.43	0.73	0.894931
6725	3R_DroMel_CAF1	17,717,447 – 17,717,541	- - - - - - - - -	10921	17,717,447 – 17,717,541	+	4	97	84.82	-1.62	0.75	0.657537
6726	3R_DroMel_CAF1	17,718,023 – 17,718,134	- - - - - - - - -	10922	17,718,023 – 17,718,134	+	5	119	86.56	-2.28	0.91	0.995236
6727	3R_DroMel_CAF1	17,720,714 – 17,720,815	- - - - - - - - -	10923	17,720,714 – 17,720,815	-	6	108	78.23	-1.73	0.54	0.552566
6728	3R_DroMel_CAF1	17,720,999 – 17,721,098	- - - - - - - - -	10924	17,720,999 – 17,721,098	+	6	104	84.57	-3.52	0.63	0.753084
6728	3R_DroMel_CAF1	17,720,999 – 17,721,098	- - - - - - - - -	10925	17,720,999 – 17,721,098	-	6	104	84.57	-2.82	0.70	0.685653
6729	3R_DroMel_CAF1	17,728,657 – 17,728,778	- - - - - - - - -	10926	17,728,657 – 17,728,752	+	6	105	71.01	-2.13	0.30	0.740211
				10927	17,728,686 – 17,728,778	+	5	93	84.56	-1.93	0.66	0.646250
				10928	17,728,686 – 17,728,778	-	5	93	84.56	-1.97	0.69	0.728088
6730	3R_DroMel_CAF1	17,729,435 – 17,729,533	- - - - - - - - -	10929	17,729,435 – 17,729,533	+	5	99	87.80	-1.56	0.74	0.534050
6731	3R_DroMel_CAF1	17,731,626 – 17,731,735	- - - "knownCDS=Parent=FBtr0084148;Name=CG6678-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6678-RA" - - - - -	10930	17,731,626 – 17,731,735	+	5	113	90.23	-1.34	0.98	0.895551
6732	3R_DroMel_CAF1	17,738,253 – 17,738,439	- - - "knownCDS=Parent=FBtr0084149;Name=CG6690-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6690-RA" - - - - -	10931	17,738,253 – 17,738,369	-	6	116	74.66	-1.90	0.48	0.751439
				10932	17,738,293 – 17,738,401	+	6	111	74.52	-1.74	0.52	0.707335
				10933	17,738,293 – 17,738,401	-	6	111	74.52	-2.56	0.55	0.992343
				10934	17,738,329 – 17,738,439	-	6	120	71.30	-1.99	0.41	0.840797
6733	3R_DroMel_CAF1	17,741,527 – 17,741,618	- - - - - - - - -	10935	17,741,527 – 17,741,618	-	6	108	77.81	-1.61	0.64	0.814105
6734	3R_DroMel_CAF1	17,743,603 – 17,743,711	- - - - - - - - -	10936	17,743,603 – 17,743,711	-	6	117	78.65	-1.92	0.60	0.842811
6735	3R_DroMel_CAF1	17,745,394 – 17,745,489	- - - - - - - - -	10937	17,745,394 – 17,745,489	+	6	96	79.58	-2.18	0.53	0.749296
6735	3R_DroMel_CAF1	17,745,394 – 17,745,489	- - - - - - - - -	10938	17,745,394 – 17,745,489	-	6	96	79.58	-2.39	0.62	0.927232
6736	3R_DroMel_CAF1	17,750,161 – 17,750,259	- - - - - - - - -	10939	17,750,161 – 17,750,259	-	5	99	92.78	-2.08	0.74	0.678096
6737	3R_DroMel_CAF1	17,754,177 – 17,754,308	- - - - - - - - -	10940	17,754,177 – 17,754,278	-	6	104	81.74	-2.14	0.60	0.665116
				10941	17,754,210 – 17,754,308	+	6	111	71.82	-1.53	0.50	0.519983
				10942	17,754,210 – 17,754,308	-	6	111	71.82	-1.96	0.52	0.943850
6738	3R_DroMel_CAF1	17,758,448 – 17,758,540	- - - - - - - - -	10943	17,758,448 – 17,758,540	-	5	111	82.90	-3.08	0.84	0.998072
6739	3R_DroMel_CAF1	17,758,656 – 17,758,747	- - - - - - - - -	10944	17,758,656 – 17,758,747	+	5	109	87.61	-1.59	0.74	0.564695
6740	3R_DroMel_CAF1	17,760,790 – 17,760,911	- - - - - - - - -	10945	17,760,790 – 17,760,885	+	5	95	91.58	-1.72	0.79	0.801800
				10946	17,760,790 – 17,760,885	-	5	95	91.58	-1.45	0.78	0.537427
				10947	17,760,809 – 17,760,911	+	5	102	94.79	-1.54	0.92	0.968871
				10948	17,760,809 – 17,760,911	-	5	102	94.79	-1.08	0.93	0.555202
6741	3R_DroMel_CAF1	17,763,550 – 17,763,656	- - - - - - - - -	10949	17,763,550 – 17,763,656	+	6	117	83.22	-1.93	0.67	0.557584
6742	3R_DroMel_CAF1	17,764,836 – 17,764,941	- - - - - - - - -	10950	17,764,836 – 17,764,941	+	6	118	83.39	-1.46	0.79	0.539878
6742	3R_DroMel_CAF1	17,764,836 – 17,764,941	- - - - - - - - -	10951	17,764,836 – 17,764,941	-	6	118	83.39	-1.66	0.74	0.576881
6743	3R_DroMel_CAF1	17,765,128 – 17,765,231	- - - - - - - - -	10952	17,765,128 – 17,765,231	+	6	116	81.94	-1.90	0.64	0.642248
6744	3R_DroMel_CAF1	17,765,515 – 17,765,613	- - - - - - - - -	10953	17,765,515 – 17,765,613	-	5	106	85.74	-1.63	0.82	0.693795
6745	3R_DroMel_CAF1	17,768,434 – 17,768,592	- - - - - - - - -	10954	17,768,434 – 17,768,524	+	5	90	88.07	-2.28	0.98	0.999313
6745	3R_DroMel_CAF1	17,768,434 – 17,768,592	- - - - - - - - -	10955	17,768,486 – 17,768,592	-	6	108	77.78	-1.35	0.65	0.655210
6746	3R_DroMel_CAF1	17,768,942 – 17,769,035	- - - - - - - - -	10956	17,768,942 – 17,769,035	+	6	94	78.96	-2.09	0.57	0.839161
6746	3R_DroMel_CAF1	17,768,942 – 17,769,035	- - - - - - - - -	10957	17,768,942 – 17,769,035	-	6	94	78.96	-1.55	0.60	0.599176
6747	3R_DroMel_CAF1	17,770,884 – 17,770,977	- - - - - - - - -	10958	17,770,884 – 17,770,977	-	4	108	82.09	-1.98	0.76	0.889346
6748	3R_DroMel_CAF1	17,781,534 – 17,781,651	- - - - - - - - -	10959	17,781,534 – 17,781,625	+	6	99	73.82	-2.07	0.60	0.975635
				10960	17,781,534 – 17,781,625	-	6	99	73.82	-2.25	0.53	0.976678
				10961	17,781,551 – 17,781,651	-	5	118	74.63	-1.77	0.48	0.615397
6749	3R_DroMel_CAF1	17,784,921 – 17,785,020	- - - - - - - - -	10962	17,784,921 – 17,785,020	+	6	108	76.99	-1.31	0.77	0.873390
6749	3R_DroMel_CAF1	17,784,921 – 17,785,020	- - - - - - - - -	10963	17,784,921 – 17,785,020	-	6	108	76.99	-1.34	0.70	0.820580
6750	3R_DroMel_CAF1	17,789,075 – 17,789,226	- - - - - - - - -	10964	17,789,075 – 17,789,190	-	5	115	94.79	-2.41	0.85	0.996812
				10965	17,789,114 – 17,789,226	+	5	112	97.64	-2.22	0.94	0.998776
				10966	17,789,114 – 17,789,226	-	5	112	97.64	-2.11	0.99	0.999174
6751	3R_DroMel_CAF1	17,792,220 – 17,792,321	- - - - - - - - -	10967	17,792,220 – 17,792,321	-	5	108	79.38	-1.71	0.60	0.565530
6752	3R_DroMel_CAF1	17,792,588 – 17,792,680	- - - - - - - - -	10968	17,792,588 – 17,792,680	-	4	93	81.33	-2.10	0.57	0.652693
6753	3R_DroMel_CAF1	17,794,031 – 17,794,121	- - - - - - - - -	10969	17,794,031 – 17,794,121	+	5	96	76.84	-2.27	0.70	0.988312
6753	3R_DroMel_CAF1	17,794,031 – 17,794,121	- - - - - - - - -	10970	17,794,031 – 17,794,121	-	5	96	76.84	-1.74	0.53	0.535755
6754	3R_DroMel_CAF1	17,807,061 – 17,807,165	- - - - - - - - -	10971	17,807,061 – 17,807,165	+	6	111	75.95	-3.21	0.51	0.996793
6754	3R_DroMel_CAF1	17,807,061 – 17,807,165	- - - - - - - - -	10972	17,807,061 – 17,807,165	-	6	111	75.95	-2.19	0.41	0.749592
6755	3R_DroMel_CAF1	17,814,330 – 17,814,436	- - - - - - - - -	10973	17,814,330 – 17,814,436	-	5	114	81.23	-2.03	0.70	0.882992
6756	3R_DroMel_CAF1	17,815,628 – 17,815,722	- - - - - - - - -	10974	17,815,628 – 17,815,722	-	6	110	86.37	-1.45	0.87	0.563201
6757	3R_DroMel_CAF1	17,819,133 – 17,819,228	- - - - - - - - -	10975	17,819,133 – 17,819,228	+	6	108	93.22	-1.48	0.89	0.840791
6758	3R_DroMel_CAF1	17,822,140 – 17,822,243	- - - "knownCDS=Parent=FBtr0084169;Name=Eip93F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18389-RA" - - - - -	10976	17,822,140 – 17,822,243	+	5	118	83.67	-1.82	0.66	0.612788
6759	3R_DroMel_CAF1	17,823,757 – 17,823,849	- - - - - - - - -	10977	17,823,757 – 17,823,849	+	6	109	79.95	-2.04	0.71	0.904661
6759	3R_DroMel_CAF1	17,823,757 – 17,823,849	- - - - - - - - -	10978	17,823,757 – 17,823,849	-	6	109	79.95	-2.01	0.60	0.795013
6760	3R_DroMel_CAF1	17,833,708 – 17,833,800	- - - - - - - - -	10979	17,833,708 – 17,833,800	+	3	93	88.56	-2.55	0.78	0.805829
6761	3R_DroMel_CAF1	17,842,811 – 17,842,931	- - - "knownCDS=Parent=FBtr0084190;Name=CG6439-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6439-RA" - - - - -	10980	17,842,811 – 17,842,931	-	6	120	80.11	-1.67	0.59	0.550769
6762	3R_DroMel_CAF1	17,843,919 – 17,844,010	- - - - - - - - -	10981	17,843,919 – 17,844,010	-	4	106	83.68	-1.41	0.83	0.515058
6763	3R_DroMel_CAF1	17,846,559 – 17,846,679	- - - "knownCDS=Parent=FBtr0084188;Name=CG6455-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6455-RA" - - - - -	10982	17,846,559 – 17,846,679	-	6	120	79.17	-2.07	0.56	0.799655
6764	3R_DroMel_CAF1	17,848,782 – 17,848,876	- - - "knownCDS=Parent=FBtr0084188;Name=CG6455-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6455-RA" - - - - -	10983	17,848,782 – 17,848,876	-	5	95	94.92	-1.26	0.87	0.593315
6765	3R_DroMel_CAF1	17,849,395 – 17,849,503	- - - "knownCDS=Parent=FBtr0084171;Name=mRpL35-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13410-RA" - - - - -	10984	17,849,395 – 17,849,503	-	6	118	71.73	-2.18	0.38	0.902804
6766	3R_DroMel_CAF1	17,849,530 – 17,849,641	- - - "knownCDS=Parent=FBtr0084171;Name=mRpL35-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13410-RA" - - - - -	10985	17,849,530 – 17,849,641	+	6	111	76.87	-1.88	0.49	0.609310
6767	3R_DroMel_CAF1	17,851,237 – 17,851,327	- - - - - - - - -	10986	17,851,237 – 17,851,327	+	4	102	74.70	-2.27	0.64	0.991995
6767	3R_DroMel_CAF1	17,851,237 – 17,851,327	- - - - - - - - -	10987	17,851,237 – 17,851,327	-	4	102	74.70	-1.41	0.78	0.805997
6768	3R_DroMel_CAF1	17,852,625 – 17,852,736	- - - "knownCDS=Parent=FBtr0084185;Name=CG6022-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6022-RA" - - - - -	10988	17,852,625 – 17,852,736	+	6	114	77.96	-1.92	0.56	0.801548
6768	3R_DroMel_CAF1	17,852,625 – 17,852,736		10989	17,852,625 – 17,852,736	-	6	114	77.96	-2.05	0.55	0.845178
6769	3R_DroMel_CAF1	17,853,750 – 17,853,854	- - - "knownCDS=Parent=FBtr0084173;Name=ND42-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6343-RB" - - - - -	10990	17,853,750 – 17,853,854	-	6	111	79.90	-1.33	0.65	0.536968
6770	3R_DroMel_CAF1	17,857,608 – 17,857,742	- - - - - - - - -	10991	17,857,608 – 17,857,706	+	5	99	94.31	-2.14	0.86	0.993626
				10992	17,857,608 – 17,857,706	-	5	99	94.31	-2.20	0.74	0.623927
				10993	17,857,644 – 17,857,742	-	5	99	93.50	-1.21	0.93	0.776464
6771	3R_DroMel_CAF1	17,862,055 – 17,862,190	- - - - - - - - -	10994	17,862,055 – 17,862,155	+	6	103	78.91	-1.89	0.75	0.928695
				10995	17,862,055 – 17,862,155	-	6	103	78.91	-2.42	0.54	0.913091
				10996	17,862,080 – 17,862,190	+	6	112	83.31	-1.43	0.80	0.542476
6772	3R_DroMel_CAF1	17,862,604 – 17,862,724	- - - "knownCDS=Parent=FBtr0084174, FBtr0084175;Name=pit-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6375-RB, FlyBase+Annotation+IDs:CG6375-RA" - - - - -	10997	17,862,604 – 17,862,724	+	6	120	82.33	-1.95	0.60	0.505885
6773	3R_DroMel_CAF1	17,867,331 – 17,867,427	- - - - - - - - -	10998	17,867,331 – 17,867,427	+	6	104	76.49	-2.04	0.49	0.779701
6773	3R_DroMel_CAF1	17,867,331 – 17,867,427	- - - - - - - - -	10999	17,867,331 – 17,867,427	-	6	104	76.49	-2.56	0.43	0.942159
6774	3R_DroMel_CAF1	17,867,558 – 17,867,648	- - - - - - - - -	11000	17,867,558 – 17,867,648	+	6	93	74.25	-3.02	0.51	0.997621
6774	3R_DroMel_CAF1	17,867,558 – 17,867,648	- - - - - - - - -	11001	17,867,558 – 17,867,648	-	6	93	74.25	-1.92	0.46	0.726943
6775	3R_DroMel_CAF1	17,872,662 – 17,872,758	- - - - - - - - -	11002	17,872,662 – 17,872,758	+	6	109	80.76	-1.51	0.75	0.739723
6776	3R_DroMel_CAF1	17,877,032 – 17,877,124	- - - - - - - - -	11003	17,877,032 – 17,877,124	-	5	95	78.05	-2.73	0.48	0.991460
6777	3R_DroMel_CAF1	17,877,224 – 17,877,321	- - - - - - - - -	11004	17,877,224 – 17,877,321	-	5	98	89.56	-2.03	0.95	0.997776
6778	3R_DroMel_CAF1	17,883,442 – 17,883,556	- - - - - - - - -	11005	17,883,442 – 17,883,556	-	4	114	94.59	-1.93	0.86	0.818188
6779	3R_DroMel_CAF1	17,886,834 – 17,886,924	- - - - - - - - -	11006	17,886,834 – 17,886,924	+	6	115	72.39	-1.97	0.41	0.772248
6780	3R_DroMel_CAF1	17,889,797 – 17,889,888	- - - - - - - - -	11007	17,889,797 – 17,889,888	-	5	94	94.36	-2.46	0.89	0.999437
6781	3R_DroMel_CAF1	17,893,514 – 17,893,606	- - - - - - - - -	11008	17,893,514 – 17,893,606	+	6	103	80.76	-3.60	0.62	0.970646
6781	3R_DroMel_CAF1	17,893,514 – 17,893,606	- - - - - - - - -	11009	17,893,514 – 17,893,606	-	6	103	80.76	-2.26	0.71	0.902662
6782	3R_DroMel_CAF1	17,907,033 – 17,907,135	- - - - - - - - -	11010	17,907,033 – 17,907,135	+	5	102	75.86	-2.19	0.48	0.947295
6783	3R_DroMel_CAF1	17,909,670 – 17,909,790	- - - - - - - - -	11011	17,909,670 – 17,909,790	+	5	120	92.42	-1.23	0.86	0.573163
6784	3R_DroMel_CAF1	17,909,977 – 17,910,080	- - - - - - - - -	11012	17,909,977 – 17,910,080	+	4	113	81.12	-1.90	0.65	0.753995
6785	3R_DroMel_CAF1	17,911,827 – 17,911,944	- - - - - - - - -	11013	17,911,827 – 17,911,944	-	3	120	75.91	-2.41	0.62	0.992962
6786	3R_DroMel_CAF1	17,914,456 – 17,914,575	- - - - - - - - -	11014	17,914,456 – 17,914,575	-	5	120	84.06	-2.03	0.61	0.590209
6787	3R_DroMel_CAF1	17,920,812 – 17,920,913	- - - - - - - - -	11015	17,920,812 – 17,920,913	+	5	113	78.88	-2.48	0.55	0.972392
6787	3R_DroMel_CAF1	17,920,812 – 17,920,913	- - - - - - - - -	11016	17,920,812 – 17,920,913	-	5	113	78.88	-2.03	0.42	0.649555
6788	3R_DroMel_CAF1	17,922,241 – 17,922,342	- - - - - - - - -	11017	17,922,241 – 17,922,342	-	3	102	86.80	-3.19	0.69	0.889338
6789	3R_DroMel_CAF1	17,935,202 – 17,935,323	- - - - - - - - -	11018	17,935,202 – 17,935,293	+	6	120	81.94	-2.10	0.58	0.565008
6789	3R_DroMel_CAF1	17,935,202 – 17,935,323	- - - - - - - - -	11019	17,935,226 – 17,935,323	+	6	108	77.71	-1.37	0.64	0.633905
6790	3R_DroMel_CAF1	17,936,590 – 17,936,683	- - - - - - - - -	11020	17,936,590 – 17,936,683	+	6	120	78.67	-2.66	0.45	0.889213
6791	3R_DroMel_CAF1	17,938,473 – 17,938,647	- - - - - - - - -	11021	17,938,473 – 17,938,577	+	6	105	90.56	-3.83	0.80	0.980161
				11022	17,938,473 – 17,938,577	-	6	105	90.56	-4.29	0.75	0.962180
				11023	17,938,497 – 17,938,607	+	6	120	87.88	-3.73	0.72	0.779865
				11024	17,938,497 – 17,938,607	-	6	120	87.88	-3.48	0.74	0.799582
				11025	17,938,537 – 17,938,647	-	6	120	79.61	-3.14	0.56	0.973807
6792	3R_DroMel_CAF1	17,942,814 – 17,942,934	- - - - - - - - -	11026	17,942,814 – 17,942,934	-	3	120	88.89	-2.34	0.82	0.805692
6793	3R_DroMel_CAF1	17,944,056 – 17,944,176	- - - "knownCDS=Parent=FBtr0084248;Name=CG31423-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31423-RA" - - - - -	11027	17,944,056 – 17,944,176	+	4	120	88.19	-1.74	0.77	0.732816
6793	3R_DroMel_CAF1	17,944,056 – 17,944,176		11028	17,944,056 – 17,944,176	-	4	120	88.19	-1.65	0.77	0.689058
6794	3R_DroMel_CAF1	17,944,402 – 17,944,522	- - - "knownCDS=Parent=FBtr0084248;Name=CG31423-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31423-RA" - - - - -	11029	17,944,402 – 17,944,522	+	5	120	89.17	-1.73	0.78	0.757286
6795	3R_DroMel_CAF1	17,946,210 – 17,946,301	- - - - - - - - -	11030	17,946,210 – 17,946,301	+	3	91	72.89	-1.59	0.62	0.854375
6796	3R_DroMel_CAF1	17,947,242 – 17,947,346	- - - - - - - - -	11031	17,947,242 – 17,947,346	-	6	114	78.22	-1.73	0.53	0.510248
6797	3R_DroMel_CAF1	17,950,396 – 17,950,494	- - - "knownCDS=Parent=FBtr0084194;Name=CG33334-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33334-RA" - - - - -	11032	17,950,396 – 17,950,494	+	4	106	81.29	-1.76	0.76	0.779245
6798	3R_DroMel_CAF1	17,955,866 – 17,955,985	- - - "knownCDS=Parent=FBtr0084196;Name=CG5740-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5740-RB" - - - - -	11033	17,955,866 – 17,955,985	+	6	119	82.24	-2.56	0.72	0.873165
6798	3R_DroMel_CAF1	17,955,866 – 17,955,985		11034	17,955,866 – 17,955,985	-	6	119	82.24	-2.11	0.63	0.671042
6799	3R_DroMel_CAF1	17,961,615 – 17,961,740	- - - - - - - - -	11035	17,961,615 – 17,961,713	+	6	109	83.60	-2.06	0.66	0.533878
				11036	17,961,615 – 17,961,713	-	6	109	83.60	-2.71	0.65	0.682296
				11037	17,961,644 – 17,961,740	+	6	104	80.18	-1.84	0.68	0.829745
				11038	17,961,644 – 17,961,740	-	6	104	80.18	-1.21	0.68	0.521185
6800	3R_DroMel_CAF1	17,963,477 – 17,963,618	- - - - - - - - -	11039	17,963,477 – 17,963,583	+	5	111	72.76	-1.52	0.64	0.786773
				11040	17,963,477 – 17,963,583	-	5	111	72.76	-1.90	0.60	0.942879
				11041	17,963,517 – 17,963,618	-	4	111	76.70	-2.63	0.53	0.974276
6801	3R_DroMel_CAF1	17,967,500 – 17,967,593	- - - - - - - - -	11042	17,967,500 – 17,967,593	+	4	96	78.16	-2.06	0.74	0.963487
6802	3R_DroMel_CAF1	17,974,687 – 17,974,794	- - - - - - - - -	11043	17,974,687 – 17,974,794	-	6	120	71.79	-1.83	0.46	0.769563
6803	3R_DroMel_CAF1	17,976,548 – 17,976,639	- - - - - - - - -	11044	17,976,548 – 17,976,639	+	6	94	94.02	-1.15	0.89	0.556829
6804	3R_DroMel_CAF1	17,976,848 – 17,976,940	- - - - - - - - -	11045	17,976,848 – 17,976,940	+	4	92	92.93	-2.37	0.79	0.827815
6804	3R_DroMel_CAF1	17,976,848 – 17,976,940	- - - - - - - - -	11046	17,976,848 – 17,976,940	-	4	92	92.93	-2.03	0.79	0.741033
6805	3R_DroMel_CAF1	17,977,387 – 17,977,489	- - - - - - - - -	11047	17,977,387 – 17,977,489	+	3	102	85.03	-1.70	0.82	0.608897
6805	3R_DroMel_CAF1	17,977,387 – 17,977,489	- - - - - - - - -	11048	17,977,387 – 17,977,489	-	3	102	85.03	-1.74	0.73	0.500000
6806	3R_DroMel_CAF1	17,978,209 – 17,978,302	- - - - - - - - -	11049	17,978,209 – 17,978,302	+	6	110	80.41	-1.77	0.59	0.602594
6806	3R_DroMel_CAF1	17,978,209 – 17,978,302	- - - - - - - - -	11050	17,978,209 – 17,978,302	-	6	110	80.41	-2.15	0.61	0.824342
6807	3R_DroMel_CAF1	18,000,115 – 18,000,235	- - - "knownCDS=Parent=FBtr0084199;Name=CG31163-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31163-RC" - - - - -	11051	18,000,115 – 18,000,235	-	6	120	83.89	-1.71	0.72	0.511349
6808	3R_DroMel_CAF1	18,005,888 – 18,006,020	- - - - - - - - -	11052	18,005,888 – 18,005,982	+	4	104	65.30	-3.19	0.45	0.998143
				11053	18,005,888 – 18,005,982	-	4	104	65.30	-1.96	0.52	0.973608
				11054	18,005,912 – 18,006,020	+	4	118	65.22	-2.21	0.52	0.992807
				11055	18,005,912 – 18,006,020	-	4	118	65.22	-1.44	0.62	0.938953
6809	3R_DroMel_CAF1	18,009,234 – 18,009,336	- - - - - - - - -	11056	18,009,234 – 18,009,336	-	4	109	83.77	-1.42	0.76	0.500000
6810	3R_DroMel_CAF1	18,021,517 – 18,021,610	- - - - - - - - -	11057	18,021,517 – 18,021,610	+	6	115	57.64	-1.19	0.41	0.559818
6810	3R_DroMel_CAF1	18,021,517 – 18,021,610	- - - - - - - - -	11058	18,021,517 – 18,021,610	-	6	115	57.64	-1.99	0.33	0.818037
6811	3R_DroMel_CAF1	18,024,972 – 18,025,089	- - - - - - - - -	11059	18,024,972 – 18,025,075	+	6	113	82.64	-1.72	0.74	0.668945
6811	3R_DroMel_CAF1	18,024,972 – 18,025,089	- - - - - - - - -	11060	18,024,995 – 18,025,089	+	6	102	81.38	-1.86	0.67	0.734804
6812	3R_DroMel_CAF1	18,025,461 – 18,025,561	- - - - - - - - -	11061	18,025,461 – 18,025,561	-	6	104	81.89	-3.12	0.68	0.923144
6813	3R_DroMel_CAF1	18,027,055 – 18,027,157	- - - - - - - - -	11062	18,027,055 – 18,027,157	+	5	104	87.04	-1.88	0.97	0.986064
6814	3R_DroMel_CAF1	18,027,970 – 18,028,067	- - - - - - - - -	11063	18,027,970 – 18,028,067	+	6	100	92.53	-1.39	0.91	0.844755
6815	3R_DroMel_CAF1	18,028,102 – 18,028,200	- - - - - - - - -	11064	18,028,102 – 18,028,200	-	4	104	91.25	-2.32	0.93	0.988729
6816	3R_DroMel_CAF1	18,029,527 – 18,029,646	- - - - - - - - -	11065	18,029,527 – 18,029,646	-	5	120	83.88	-2.43	0.65	0.883171
6817	3R_DroMel_CAF1	18,030,453 – 18,030,560	- - - - - - - - -	11066	18,030,453 – 18,030,560	-	5	109	81.29	-2.23	0.59	0.859793
6818	3R_DroMel_CAF1	18,031,149 – 18,031,287	- - - - - - - - -	11067	18,031,149 – 18,031,247	+	5	110	91.63	-1.54	0.85	0.867167
				11068	18,031,149 – 18,031,247	-	5	110	91.63	-1.99	0.78	0.892178
				11069	18,031,176 – 18,031,287	-	6	115	76.98	-2.48	0.34	0.669110
6819	3R_DroMel_CAF1	18,031,711 – 18,031,809	- - - - - - - - -	11070	18,031,711 – 18,031,809	+	6	106	81.89	-2.18	0.60	0.666041
6820	3R_DroMel_CAF1	18,032,455 – 18,032,607	- - - - - - - - -	11071	18,032,455 – 18,032,551	+	5	96	92.92	-1.45	0.83	0.726250
				11072	18,032,517 – 18,032,607	+	6	97	82.18	-1.68	0.69	0.622697
				11073	18,032,517 – 18,032,607	-	6	97	82.18	-2.06	0.68	0.742090
6821	3R_DroMel_CAF1	18,032,971 – 18,033,073	- - - - - - - - -	11074	18,032,971 – 18,033,073	+	6	120	82.57	-2.59	0.78	0.901202
6822	3R_DroMel_CAF1	18,037,766 – 18,037,929	- - - - - - - - -	11075	18,037,766 – 18,037,865	-	5	100	87.22	-2.04	0.66	0.578149
6822	3R_DroMel_CAF1	18,037,766 – 18,037,929	- - - - - - - - -	11076	18,037,831 – 18,037,929	+	6	99	80.94	-2.28	0.55	0.712406
6823	3R_DroMel_CAF1	18,039,946 – 18,040,060	- - "RNAmicro=f:18039946_t:18040059_strand:-_p:0.891857" "knownCDS=Parent=FBtr0084200;Name=CG5732-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5732-RA" - - - - -	11077	18,039,946 – 18,040,060	+	6	114	93.86	-2.89	0.96	0.999958
6823	3R_DroMel_CAF1	18,039,946 – 18,040,060		11078	18,039,946 – 18,040,060	-	6	114	93.86	-1.46	0.92	0.944074
6824	3R_DroMel_CAF1	18,040,793 – 18,040,891	- - - - - - - - -	11079	18,040,793 – 18,040,891	-	5	118	74.62	-2.04	0.49	0.915104
6825	3R_DroMel_CAF1	18,041,618 – 18,041,738	- - - "knownCDS=Parent=FBtr0084200;Name=CG5732-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5732-RA" - - - - -	11080	18,041,618 – 18,041,738	-	6	120	77.61	-2.20	0.44	0.667033
6826	3R_DroMel_CAF1	18,047,121 – 18,047,238	- - - - - - - - -	11081	18,047,121 – 18,047,238	-	5	117	96.07	-1.35	0.90	0.812447
6827	3R_DroMel_CAF1	18,047,642 – 18,047,739	- - - - - - - - -	11082	18,047,642 – 18,047,739	-	5	98	93.74	-1.63	0.82	0.807744
6828	3R_DroMel_CAF1	18,050,154 – 18,050,252	- - - - - - - - -	11083	18,050,154 – 18,050,252	+	5	110	78.90	-2.82	0.54	0.992963
6829	3R_DroMel_CAF1	18,057,214 – 18,057,357	- - - - - - - - -	11084	18,057,214 – 18,057,319	-	6	119	71.31	-2.72	0.33	0.986874
6829	3R_DroMel_CAF1	18,057,214 – 18,057,357	- - - - - - - - -	11085	18,057,245 – 18,057,357	-	6	119	77.72	-2.34	0.50	0.904200
6830	3R_DroMel_CAF1	18,058,034 – 18,058,133	- - - - - - - - -	11086	18,058,034 – 18,058,133	-	5	100	88.67	-1.84	0.70	0.557061
6831	3R_DroMel_CAF1	18,059,662 – 18,059,766	- - - - - - - - -	11087	18,059,662 – 18,059,766	+	6	120	81.36	-1.73	0.69	0.721810
6831	3R_DroMel_CAF1	18,059,662 – 18,059,766	- - - - - - - - -	11088	18,059,662 – 18,059,766	-	6	120	81.36	-1.68	0.78	0.785776
6832	3R_DroMel_CAF1	18,062,484 – 18,062,592	- - - - - - - - -	11089	18,062,484 – 18,062,592	+	5	113	84.92	-4.03	0.50	0.935681
6832	3R_DroMel_CAF1	18,062,484 – 18,062,592	- - - - - - - - -	11090	18,062,484 – 18,062,592	-	5	113	84.92	-2.96	0.67	0.961538
6833	3R_DroMel_CAF1	18,064,207 – 18,064,317	- - - - - - - - -	11091	18,064,207 – 18,064,317	+	6	120	84.04	-2.38	0.64	0.516468
6834	3R_DroMel_CAF1	18,082,317 – 18,082,408	- - - - - - - - -	11092	18,082,317 – 18,082,408	+	6	94	80.82	-1.58	0.61	0.528950
6835	3R_DroMel_CAF1	18,085,299 – 18,085,452	- - - - - - - - -	11093	18,085,299 – 18,085,393	+	6	113	77.98	-1.90	0.51	0.584807
6835	3R_DroMel_CAF1	18,085,299 – 18,085,452	- - - - - - - - -	11094	18,085,353 – 18,085,452	-	6	118	79.72	-2.55	0.49	0.829794
6836	3R_DroMel_CAF1	18,100,703 – 18,100,794	- - - - - - - - -	11095	18,100,703 – 18,100,794	-	6	116	78.37	-1.68	0.55	0.500000
6837	3R_DroMel_CAF1	18,105,487 – 18,105,581	- - - - - - - - -	11096	18,105,487 – 18,105,581	+	5	114	81.79	-1.70	0.82	0.775904
6837	3R_DroMel_CAF1	18,105,487 – 18,105,581	- - - - - - - - -	11097	18,105,487 – 18,105,581	-	5	114	81.79	-2.74	0.69	0.984967
6838	3R_DroMel_CAF1	18,106,013 – 18,106,118	- - - - - - - - -	11098	18,106,013 – 18,106,118	-	6	118	80.05	-1.62	0.61	0.607470
6839	3R_DroMel_CAF1	18,106,778 – 18,106,879	- - - - - - - - -	11099	18,106,778 – 18,106,879	+	5	101	88.55	-1.83	0.75	0.727146
6840	3R_DroMel_CAF1	18,107,039 – 18,107,131	- - - - - - - - -	11100	18,107,039 – 18,107,131	+	6	101	82.54	-1.57	0.69	0.552666
6840	3R_DroMel_CAF1	18,107,039 – 18,107,131	- - - - - - - - -	11101	18,107,039 – 18,107,131	-	6	101	82.54	-2.27	0.64	0.689447
6841	3R_DroMel_CAF1	18,109,089 – 18,109,180	- - - - - - - - -	11102	18,109,089 – 18,109,180	+	5	91	91.05	-1.43	0.84	0.726273
6841	3R_DroMel_CAF1	18,109,089 – 18,109,180	- - - - - - - - -	11103	18,109,089 – 18,109,180	-	5	91	91.05	-1.79	0.87	0.973934
6842	3R_DroMel_CAF1	18,109,845 – 18,109,947	- - - - - - - - -	11104	18,109,845 – 18,109,947	+	6	120	77.92	-1.95	0.56	0.805699
6843	3R_DroMel_CAF1	18,110,519 – 18,110,635	- - - - - - - - -	11105	18,110,519 – 18,110,635	+	6	118	74.37	-0.68	0.75	0.530044
6844	3R_DroMel_CAF1	18,110,748 – 18,110,885	- - - - - - - - -	11106	18,110,748 – 18,110,847	-	4	99	89.74	-2.35	0.71	0.773515
				11107	18,110,785 – 18,110,885	+	4	100	91.37	-2.15	0.80	0.866680
				11108	18,110,785 – 18,110,885	-	4	100	91.37	-2.17	0.80	0.882866
6845	3R_DroMel_CAF1	18,112,212 – 18,112,347	- - - - - - - - -	11109	18,112,212 – 18,112,314	-	6	107	82.58	-1.81	0.64	0.542002
6845	3R_DroMel_CAF1	18,112,212 – 18,112,347	- - - - - - - - -	11110	18,112,245 – 18,112,347	-	6	104	84.58	-2.56	0.82	0.896877
6846	3R_DroMel_CAF1	18,116,915 – 18,117,035	- - - "knownCDS=Parent=FBtr0084199;Name=CG31163-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31163-RC" - - - - -	11111	18,116,915 – 18,117,035	-	6	120	94.94	-1.33	0.90	0.783860
6847	3R_DroMel_CAF1	18,117,887 – 18,117,977	- - - - - - - - -	11112	18,117,887 – 18,117,977	+	6	103	77.65	-3.33	0.46	0.991550
6847	3R_DroMel_CAF1	18,117,887 – 18,117,977	- - - - - - - - -	11113	18,117,887 – 18,117,977	-	6	103	77.65	-2.54	0.47	0.929593
6848	3R_DroMel_CAF1	18,119,673 – 18,119,767	- - - - - - - - -	11114	18,119,673 – 18,119,767	-	6	118	74.90	-1.63	0.55	0.680350
6849	3R_DroMel_CAF1	18,119,833 – 18,119,941	- - - - - - - - -	11115	18,119,833 – 18,119,941	+	6	120	74.59	-2.45	0.51	0.984175
6850	3R_DroMel_CAF1	18,125,865 – 18,125,955	- - - - - - - - -	11116	18,125,865 – 18,125,955	-	5	90	86.12	-1.85	0.70	0.653580
6851	3R_DroMel_CAF1	18,131,650 – 18,131,782	- - - - - - - - -	11117	18,131,650 – 18,131,753	-	6	114	75.48	-2.12	0.67	0.980414
6851	3R_DroMel_CAF1	18,131,650 – 18,131,782	- - - - - - - - -	11118	18,131,681 – 18,131,782	-	6	111	83.69	-2.13	0.74	0.704129
6852	3R_DroMel_CAF1	18,135,949 – 18,136,077	- - - - - - - - -	11119	18,135,949 – 18,136,046	-	6	97	95.46	-2.75	0.96	0.999951
6852	3R_DroMel_CAF1	18,135,949 – 18,136,077	- - - - - - - - -	11120	18,135,980 – 18,136,077	-	6	97	91.40	-2.86	0.83	0.945754
6853	3R_DroMel_CAF1	18,136,220 – 18,136,329	- - - - - - - - -	11121	18,136,220 – 18,136,329	+	5	110	77.10	-1.91	0.53	0.751498
6854	3R_DroMel_CAF1	18,137,579 – 18,137,717	- - - - - - - - -	11122	18,137,579 – 18,137,679	+	6	100	81.28	-2.61	0.46	0.557953
				11123	18,137,579 – 18,137,679	-	6	100	81.28	-2.52	0.50	0.647054
				11124	18,137,610 – 18,137,717	+	6	120	73.27	-2.27	0.68	0.991920
6855	3R_DroMel_CAF1	18,139,009 – 18,139,109	- - - - - - - - -	11125	18,139,009 – 18,139,109	-	4	116	69.97	-1.90	0.56	0.947915
6856	3R_DroMel_CAF1	18,139,767 – 18,139,863	- - - - - - - - -	11126	18,139,767 – 18,139,863	-	6	116	83.64	-1.74	0.77	0.630532
6857	3R_DroMel_CAF1	18,141,233 – 18,141,333	- - - - - - - - -	11127	18,141,233 – 18,141,333	+	6	103	78.47	-1.40	0.66	0.690668
6858	3R_DroMel_CAF1	18,142,122 – 18,142,268	- - - - - - - - -	11128	18,142,122 – 18,142,233	+	5	116	87.34	-2.59	0.79	0.987130
				11129	18,142,122 – 18,142,233	-	5	116	87.34	-1.81	0.74	0.693323
				11130	18,142,162 – 18,142,268	+	5	112	72.79	-3.38	0.62	0.999867
6859	3R_DroMel_CAF1	18,144,607 – 18,144,737	- - - - - - - - -	11131	18,144,607 – 18,144,704	+	6	105	81.14	-3.14	0.75	0.951322
				11132	18,144,607 – 18,144,704	-	6	105	81.14	-2.88	0.69	0.935330
				11133	18,144,639 – 18,144,737	+	6	105	81.51	-2.52	0.77	0.919246
				11134	18,144,639 – 18,144,737	-	6	105	81.51	-2.72	0.75	0.928535
6860	3R_DroMel_CAF1	18,148,712 – 18,148,814	- - - - - - - - -	11135	18,148,712 – 18,148,814	+	6	102	69.67	-2.04	0.53	0.973028
6861	3R_DroMel_CAF1	18,152,343 – 18,152,435	- - - - - - - - -	11136	18,152,343 – 18,152,435	+	6	110	80.22	-1.81	0.56	0.521797
6862	3R_DroMel_CAF1	18,153,444 – 18,153,553	- - - - - - - - -	11137	18,153,444 – 18,153,553	-	5	111	94.19	-1.22	0.93	0.793244
6863	3R_DroMel_CAF1	18,158,365 – 18,158,485	- - - - - - - - -	11138	18,158,365 – 18,158,485	-	4	120	83.12	-2.26	0.65	0.890598
6864	3R_DroMel_CAF1	18,164,989 – 18,165,093	- - - - - - - - -	11139	18,164,989 – 18,165,093	+	5	104	95.38	-1.72	0.88	0.964732
6865	3R_DroMel_CAF1	18,168,114 – 18,168,334	- - - - - - - - -	11140	18,168,114 – 18,168,221	+	6	107	95.51	-0.85	0.95	0.642799
6865	3R_DroMel_CAF1	18,168,114 – 18,168,334	- - - - - - - - -	11141	18,168,221 – 18,168,334	+	4	116	86.32	-1.72	0.66	0.583343
6866	3R_DroMel_CAF1	18,169,888 – 18,170,082	- - - - - - - - -	11142	18,169,888 – 18,169,988	+	5	108	93.18	-1.62	1.00	0.995273
				11143	18,169,888 – 18,169,988	-	5	108	93.18	-1.12	0.90	0.513005
				11144	18,169,924 – 18,170,019	+	6	108	78.98	-2.52	0.60	0.953334
				11145	18,169,924 – 18,170,019	-	6	108	78.98	-1.62	0.64	0.741447
				11146	18,169,988 – 18,170,082	-	5	95	97.46	-1.79	0.98	0.994857
6867	3R_DroMel_CAF1	18,170,195 – 18,170,314	- - - - - - - - -	11147	18,170,195 – 18,170,288	+	6	107	85.67	-3.01	0.80	0.901919
6867	3R_DroMel_CAF1	18,170,195 – 18,170,314	- - - - - - - - -	11148	18,170,221 – 18,170,314	+	6	98	94.35	-2.68	0.91	0.999250
6868	3R_DroMel_CAF1	18,172,142 – 18,172,259	- - - - - - - - -	11149	18,172,142 – 18,172,259	+	5	119	92.70	-1.39	0.80	0.518260
6869	3R_DroMel_CAF1	18,172,388 – 18,172,486	- - - - - - - - -	11150	18,172,388 – 18,172,486	-	6	115	75.52	-2.02	0.52	0.887784
6870	3R_DroMel_CAF1	18,172,521 – 18,172,667	- - - - - - - - -	11151	18,172,521 – 18,172,612	+	6	120	80.63	-2.86	0.61	0.937089
				11152	18,172,549 – 18,172,649	+	6	120	86.16	-3.08	0.80	0.919770
				11153	18,172,549 – 18,172,649	-	6	120	86.16	-2.75	0.77	0.777668
				11154	18,172,572 – 18,172,667	+	6	102	91.37	-2.94	0.82	0.952162
6871	3R_DroMel_CAF1	18,173,820 – 18,173,913	- - - - - - - - -	11155	18,173,820 – 18,173,913	+	6	93	92.97	-1.42	0.88	0.677374
6871	3R_DroMel_CAF1	18,173,820 – 18,173,913	- - - - - - - - -	11156	18,173,820 – 18,173,913	-	6	93	92.97	-1.76	0.87	0.872830
6872	3R_DroMel_CAF1	18,175,864 – 18,175,962	- - - - - - - - -	11157	18,175,864 – 18,175,962	-	5	103	87.28	-2.00	0.67	0.559638
6873	3R_DroMel_CAF1	18,176,366 – 18,176,456	- - - - - - - - -	11158	18,176,366 – 18,176,456	+	6	90	95.56	-2.01	0.87	0.947174
6873	3R_DroMel_CAF1	18,176,366 – 18,176,456	- - - - - - - - -	11159	18,176,366 – 18,176,456	-	6	90	95.56	-2.06	0.89	0.984363
6874	3R_DroMel_CAF1	18,180,046 – 18,180,158	- - - - - - - - -	11160	18,180,046 – 18,180,158	+	5	120	92.10	-1.52	0.79	0.623127
6874	3R_DroMel_CAF1	18,180,046 – 18,180,158	- - - - - - - - -	11161	18,180,046 – 18,180,158	-	5	120	92.10	-1.66	0.81	0.824210
6875	3R_DroMel_CAF1	18,182,316 – 18,182,416	- - - - - - - - -	11162	18,182,316 – 18,182,416	-	5	101	79.64	-1.54	0.72	0.631744
6876	3R_DroMel_CAF1	18,182,538 – 18,182,638	- - - - - - - - -	11163	18,182,538 – 18,182,638	-	5	103	83.40	-2.07	0.60	0.633965
6877	3R_DroMel_CAF1	18,184,113 – 18,184,256	- - - "knownCDS=Parent=FBtr0084207;Name=sar1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7073-RB" - - - - -	11164	18,184,113 – 18,184,225	-	6	120	84.79	-1.92	0.73	0.509044
6877	3R_DroMel_CAF1	18,184,113 – 18,184,256		11165	18,184,153 – 18,184,256	-	6	110	78.84	-1.76	0.66	0.858460
6878	3R_DroMel_CAF1	18,185,199 – 18,185,299	- - - - - - - - -	11166	18,185,199 – 18,185,299	+	6	120	71.56	-0.96	0.77	0.894298
6879	3R_DroMel_CAF1	18,187,321 – 18,187,481	- - - "knownCDS=Parent=FBtr0084239;Name=PSR-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5383-RA" - - - - -	11167	18,187,321 – 18,187,441	-	6	120	81.56	-1.44	0.74	0.636488
6879	3R_DroMel_CAF1	18,187,321 – 18,187,481		11168	18,187,361 – 18,187,481	-	6	120	82.33	-1.86	0.70	0.696254
6880	3R_DroMel_CAF1	18,190,353 – 18,190,443	- - - - - - - - -	11169	18,190,353 – 18,190,443	+	6	108	81.81	-1.50	0.78	0.672554
6881	3R_DroMel_CAF1	18,191,297 – 18,191,388	- - - "knownCDS=Parent=FBtr0084237;Name=CG5382-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5382-RB" - - - - -	11170	18,191,297 – 18,191,388	+	6	106	80.69	-2.30	0.93	0.966587
6881	3R_DroMel_CAF1	18,191,297 – 18,191,388		11171	18,191,297 – 18,191,388	-	6	106	80.69	-1.23	0.83	0.623262
6882	3R_DroMel_CAF1	18,193,425 – 18,193,542	- - - - - - - - -	11172	18,193,425 – 18,193,542	+	5	120	93.06	-1.73	0.82	0.889592
6883	3R_DroMel_CAF1	18,194,101 – 18,194,250	- - - - - - - - -	11173	18,194,101 – 18,194,210	-	5	109	95.78	-1.42	0.93	0.931382
6883	3R_DroMel_CAF1	18,194,101 – 18,194,250	- - - - - - - - -	11174	18,194,130 – 18,194,250	+	5	120	95.33	-1.21	0.99	0.876146
6884	3R_DroMel_CAF1	18,194,314 – 18,194,408	- - - - - - - - -	11175	18,194,314 – 18,194,408	-	5	94	90.99	-1.34	0.84	0.637249
6885	3R_DroMel_CAF1	18,194,882 – 18,195,034	- - - - - - - - -	11176	18,194,882 – 18,194,994	+	5	118	92.32	-2.02	0.73	0.640281
				11177	18,194,919 – 18,195,034	+	5	118	95.05	-1.27	0.92	0.803577
				11178	18,194,919 – 18,195,034	-	5	118	95.05	-1.86	0.85	0.955069
6886	3R_DroMel_CAF1	18,195,434 – 18,195,554	- - - - - - - - -	11179	18,195,434 – 18,195,554	+	4	120	89.75	-1.63	0.85	0.749751
6886	3R_DroMel_CAF1	18,195,434 – 18,195,554	- - - - - - - - -	11180	18,195,434 – 18,195,554	-	4	120	89.75	-1.59	0.77	0.616441
6887	3R_DroMel_CAF1	18,196,391 – 18,196,502	- - - - - - - - -	11181	18,196,391 – 18,196,502	+	4	119	71.04	-1.88	0.47	0.506099
6888	3R_DroMel_CAF1	18,196,662 – 18,196,793	- - - "knownCDS=Parent=FBtr0084213;Name=PyK-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7070-RB" - - - - -	11182	18,196,662 – 18,196,753	-	5	91	96.70	-2.15	0.97	0.999464
6888	3R_DroMel_CAF1	18,196,662 – 18,196,793		11183	18,196,702 – 18,196,793	+	5	91	97.80	-1.24	1.00	0.814419
6889	3R_DroMel_CAF1	18,197,153 – 18,197,313	- - - "knownCDS=Parent=FBtr0084213;Name=PyK-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7070-RB" - - - - -	11184	18,197,153 – 18,197,273	+	5	120	98.00	-1.64	0.96	0.973489
6889	3R_DroMel_CAF1	18,197,153 – 18,197,313		11185	18,197,193 – 18,197,313	+	5	120	97.67	-1.17	0.98	0.690846
6890	3R_DroMel_CAF1	18,197,666 – 18,197,810	- - - "knownCDS=Parent=FBtr0084213;Name=PyK-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7070-RB" - - - - -	11186	18,197,666 – 18,197,770	+	5	104	98.08	-2.54	0.96	0.999648
				11187	18,197,666 – 18,197,770	-	5	104	98.08	-1.10	0.99	0.523866
				11188	18,197,690 – 18,197,810	+	5	120	98.67	-1.22	0.98	0.656632
6891	3R_DroMel_CAF1	18,201,757 – 18,201,863	- - - "knownCDS=Parent=FBtr0084216;Name=CG18596-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18596-RA" - - - - -	11189	18,201,757 – 18,201,863	+	6	120	74.73	-1.59	0.56	0.690858
6892	3R_DroMel_CAF1	18,202,735 – 18,202,845	- - - "knownCDS=Parent=FBtr0084216;Name=CG18596-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18596-RA" - - - - -	11190	18,202,735 – 18,202,845	-	6	110	83.64	-2.34	0.62	0.513738
6893	3R_DroMel_CAF1	18,211,134 – 18,211,289	- - - "knownCDS=Parent=FBtr0084217, FBtr0084218;Name=CG31169-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31169-RA, FlyBase+Annotation+IDs:CG31169-RB" - - - - -	11191	18,211,134 – 18,211,250	-	5	116	92.67	-1.42	0.85	0.780816
6893	3R_DroMel_CAF1	18,211,134 – 18,211,289		11192	18,211,170 – 18,211,289	-	6	119	71.44	-1.76	0.56	0.920212
6894	3R_DroMel_CAF1	18,221,364 – 18,221,461	- - - - - - - - -	11193	18,221,364 – 18,221,461	+	3	97	94.50	-1.67	0.91	0.532438
6894	3R_DroMel_CAF1	18,221,364 – 18,221,461	- - - - - - - - -	11194	18,221,364 – 18,221,461	-	3	97	94.50	-2.40	0.92	0.919044
6895	3R_DroMel_CAF1	18,222,244 – 18,222,351	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000251;Name=Dmel_Ser_GCT_14000251;TFAMID=DmelSGCT-18222250" "tRNAscan=type:Ser:anticodon:GCT f:18222249_t:18222335_strand=+_cove=82.84" - - "Rfam=AC106019.4/24546-24627_RF00005;tRNA;\|1e-33" - - "ncRNAdb=MmuscAK082357_unclassifiable\|2e-33" "Flybase=FBgn0011970:transfer_RNA:ser2b:86A:cytosolic_tRNA_gene\|1e-42"	11195	18,222,244 – 18,222,351	+	6	107	86.38	-1.51	0.93	0.825718
6895	3R_DroMel_CAF1	18,222,244 – 18,222,351		11196	18,222,244 – 18,222,351	-	6	107	86.38	-1.27	0.95	0.701636
6896	3R_DroMel_CAF1	18,222,500 – 18,222,603	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000252;Name=Dmel_Ser_GCT_14000252;TFAMID=DmelSGCT-18222602" "tRNAscan=type:Ser:anticodon:GCT f:18222520_t:18222621_strand=-_cove=82.84" - - "Rfam=AC106019.4/24546-24627_RF00005;tRNA;\|1e-33" - - "ncRNAdb=MmuscAK082357_unclassifiable\|4e-34" "Flybase=FBgn0011970:transfer_RNA:ser2b:86A:cytosolic_tRNA_gene\|1e-42"	11197	18,222,500 – 18,222,603	+	6	119	84.26	-1.49	0.95	0.815882
6896	3R_DroMel_CAF1	18,222,500 – 18,222,603		11198	18,222,500 – 18,222,603	-	6	119	84.26	-1.73	0.82	0.666061
6897	3R_DroMel_CAF1	18,222,862 – 18,222,977	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000253;Name=Dmel_Ser_GCT_14000253;TFAMID=DmelSGCT-18222983" - - - "Rfam=AC106019.4/24546-24627_RF00005;tRNA;\|2e-32" - - "ncRNAdb=MmuscAK082357_unclassifiable\|1e-31" "Flybase=FBgn0051167:CR31167:cytosolic_tRNA_gene\|5e-39"	11199	18,222,862 – 18,222,977	+	6	118	81.03	-1.12	0.94	0.534585
6898	3R_DroMel_CAF1	18,223,308 – 18,223,403	"known=exon_Parent=Dmel\CR_TRNA_ATT_14000254" - - - "Rfam=AC106019.4/24546-24627_RF00005;tRNA;\|2e-26" - - "ncRNAdb=MmuscAK082357_unclassifiable\|9e-26" "Flybase=FBgn0011970:transfer_RNA:ser2b:86A:cytosolic_tRNA_gene\|9e-34"	11200	18,223,308 – 18,223,403	-	6	114	75.59	-0.74	0.82	0.685419
6899	3R_DroMel_CAF1	18,225,804 – 18,225,896	- - - - - - - - -	11201	18,225,804 – 18,225,896	+	6	92	80.95	-1.32	0.71	0.602945
6900	3R_DroMel_CAF1	18,227,637 – 18,227,757	- - - - - - - - -	11202	18,227,637 – 18,227,757	+	4	120	95.28	-1.87	0.80	0.500000
6900	3R_DroMel_CAF1	18,227,637 – 18,227,757	- - - - - - - - -	11203	18,227,637 – 18,227,757	-	4	120	95.28	-1.55	0.88	0.556305
6901	3R_DroMel_CAF1	18,228,771 – 18,228,877	- - - - - - - - -	11204	18,228,771 – 18,228,877	+	5	113	91.77	-1.25	0.85	0.541226
6902	3R_DroMel_CAF1	18,234,162 – 18,234,254	- - - "knownCDS=Parent=FBtr0084225;Name=CG13855-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13855-RA" - - - - -	11205	18,234,162 – 18,234,254	+	6	100	80.72	-1.46	0.69	0.658758
6903	3R_DroMel_CAF1	18,234,619 – 18,234,712	- - - "knownCDS=Parent=FBtr0084231;Name=CG13850-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13850-RA" - - - - -	11206	18,234,619 – 18,234,712	+	6	100	78.67	-1.93	0.58	0.805020
6904	3R_DroMel_CAF1	18,236,626 – 18,236,787	- - - - - - - - -	11207	18,236,626 – 18,236,725	-	5	104	87.75	-2.02	0.77	0.885442
				11208	18,236,661 – 18,236,751	-	5	109	75.56	-2.21	0.67	0.987634
				11209	18,236,685 – 18,236,787	-	5	120	73.67	-2.33	0.60	0.993739
6905	3R_DroMel_CAF1	18,240,080 – 18,240,170	- - - - - - - - -	11210	18,240,080 – 18,240,170	+	6	94	79.83	-1.35	0.69	0.651704
6906	3R_DroMel_CAF1	18,241,264 – 18,241,384	- - - "knownCDS=Parent=FBtr0084228;Name=CG31285-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31285-RA" - - - - -	11211	18,241,264 – 18,241,384	-	6	120	73.17	-2.01	0.43	0.816463
6907	3R_DroMel_CAF1	18,243,975 – 18,244,095	- - - "knownCDS=Parent=FBtr0084227;Name=epsin-like-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31170-RB" - - - - -	11212	18,243,975 – 18,244,095	-	6	120	78.61	-1.44	0.64	0.639693
6908	3R_DroMel_CAF1	18,244,117 – 18,244,207	- - - "knownCDS=Parent=FBtr0084227;Name=epsin-like-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31170-RB" - - - - -	11213	18,244,117 – 18,244,207	+	6	93	81.39	-1.81	0.66	0.695176
6909	3R_DroMel_CAF1	18,245,700 – 18,245,820	- - - "knownCDS=Parent=FBtr0084230;Name=Nop56-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13849-RA" - - - - -	11214	18,245,700 – 18,245,820	-	6	120	80.17	-1.57	0.60	0.511609
6910	3R_DroMel_CAF1	18,249,210 – 18,249,304	- - - - - - - - -	11215	18,249,210 – 18,249,304	+	6	95	78.01	-2.04	0.57	0.867668
6910	3R_DroMel_CAF1	18,249,210 – 18,249,304	- - - - - - - - -	11216	18,249,210 – 18,249,304	-	6	95	78.01	-2.52	0.64	0.976205
6911	3R_DroMel_CAF1	18,251,090 – 18,251,180	- - - - - - - - -	11217	18,251,090 – 18,251,180	+	6	117	79.91	-2.00	0.56	0.686594
6912	3R_DroMel_CAF1	18,252,682 – 18,252,780	- - - "knownCDS=Parent=FBtr0084296;Name=CG13847-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13847-RA" - - - - -	11218	18,252,682 – 18,252,780	-	6	98	84.67	-2.26	0.75	0.657738
6913	3R_DroMel_CAF1	18,253,603 – 18,253,713	- - "RNAmicro=f:18253603_t:18253718_strand:+_p:0.992933" "knownCDS=Parent=FBtr0084296;Name=CG13847-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13847-RA" - - - - -	11219	18,253,603 – 18,253,713	-	6	116	82.92	-2.88	0.69	0.846761
6914	3R_DroMel_CAF1	18,255,626 – 18,255,721	- - - - - - - - -	11220	18,255,626 – 18,255,721	-	6	100	82.87	-1.46	0.74	0.536103
6915	3R_DroMel_CAF1	18,258,278 – 18,258,384	- - - - - - - - -	11221	18,258,278 – 18,258,384	+	6	120	80.00	-1.57	0.64	0.646370
6916	3R_DroMel_CAF1	18,260,479 – 18,260,640	- - - - - - - - -	11222	18,260,479 – 18,260,569	+	6	119	72.30	-2.03	0.47	0.921133
6916	3R_DroMel_CAF1	18,260,479 – 18,260,640	- - - - - - - - -	11223	18,260,536 – 18,260,640	-	6	120	86.25	-1.50	0.86	0.576543
6917	3R_DroMel_CAF1	18,263,360 – 18,263,466	- - - - - - - - -	11224	18,263,360 – 18,263,466	-	5	116	69.05	-1.89	0.17	0.629438
6918	3R_DroMel_CAF1	18,264,003 – 18,264,148	- - - - - - - - -	11225	18,264,003 – 18,264,122	+	6	119	90.64	-2.42	0.84	0.909692
6918	3R_DroMel_CAF1	18,264,003 – 18,264,148	- - - - - - - - -	11226	18,264,042 – 18,264,148	+	6	120	80.65	-1.82	0.70	0.813533
6919	3R_DroMel_CAF1	18,264,212 – 18,264,311	- - - - - - - - -	11227	18,264,212 – 18,264,311	-	4	104	88.61	-1.45	0.93	0.738706
6920	3R_DroMel_CAF1	18,264,500 – 18,264,610	- - - - - - - - -	11228	18,264,500 – 18,264,610	-	6	111	78.46	-2.29	0.64	0.953325
6921	3R_DroMel_CAF1	18,265,476 – 18,265,572	- - - - - - - - -	11229	18,265,476 – 18,265,572	+	6	102	78.27	-2.18	0.57	0.904058
6921	3R_DroMel_CAF1	18,265,476 – 18,265,572	- - - - - - - - -	11230	18,265,476 – 18,265,572	-	6	102	78.27	-2.39	0.49	0.874579
6922	3R_DroMel_CAF1	18,267,116 – 18,267,236	- - "RNAmicro=f:18267116_t:18267235_strand:+_p:0.980131" "knownCDS=Parent=FBtr0084295;Name=CG12499-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12499-RA" - - - - -	11231	18,267,116 – 18,267,236	-	4	120	92.22	-1.86	0.93	0.939131
6923	3R_DroMel_CAF1	18,267,782 – 18,267,902	- - - "knownCDS=Parent=FBtr0084295;Name=CG12499-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12499-RA" - - - - -	11232	18,267,782 – 18,267,902	+	4	120	93.89	-1.70	0.84	0.637891
6924	3R_DroMel_CAF1	18,268,501 – 18,268,621	- - - "knownCDS=Parent=FBtr0084295;Name=CG12499-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12499-RA" - - - - -	11233	18,268,501 – 18,268,621	+	4	120	95.83	-1.46	0.93	0.540961
6925	3R_DroMel_CAF1	18,269,061 – 18,269,169	- - - "knownCDS=Parent=FBtr0084295;Name=CG12499-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12499-RA" - - - - -	11234	18,269,061 – 18,269,169	-	4	108	93.06	-2.17	0.89	0.956132
6926	3R_DroMel_CAF1	18,269,708 – 18,269,828	- - - "knownCDS=Parent=FBtr0084295;Name=CG12499-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12499-RA" - - - - -	11235	18,269,708 – 18,269,828	+	4	120	96.25	-2.14	0.92	0.914287
6927	3R_DroMel_CAF1	18,270,724 – 18,271,004	- - - "knownCDS=Parent=FBtr0084295;Name=CG12499-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12499-RA" - - - - -	11236	18,270,724 – 18,270,844	+	4	120	90.69	-2.27	0.75	0.818361
				11237	18,270,764 – 18,270,884	+	4	120	94.58	-2.73	0.90	0.980631
				11238	18,270,764 – 18,270,884	-	4	120	94.58	-2.63	0.81	0.865529
				11239	18,270,884 – 18,271,004	+	4	120	95.42	-1.62	0.91	0.694408
6928	3R_DroMel_CAF1	18,271,084 – 18,271,204	- - - "knownCDS=Parent=FBtr0084295;Name=CG12499-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12499-RA" - - - - -	11240	18,271,084 – 18,271,204	+	4	120	94.58	-2.12	0.89	0.922010
6929	3R_DroMel_CAF1	18,272,716 – 18,272,824	- - - - - - - - -	11241	18,272,716 – 18,272,824	-	6	111	82.75	-1.70	0.71	0.614917
6930	3R_DroMel_CAF1	18,279,076 – 18,279,167	- - - - - - - - -	11242	18,279,076 – 18,279,167	-	4	91	86.08	-2.76	0.75	0.973826
6931	3R_DroMel_CAF1	18,279,932 – 18,280,064	- - - - - - - - -	11243	18,279,932 – 18,280,035	-	6	106	73.78	-2.19	0.63	0.987003
6931	3R_DroMel_CAF1	18,279,932 – 18,280,064	- - - - - - - - -	11244	18,279,965 – 18,280,064	-	5	106	76.92	-1.83	0.60	0.800214
6932	3R_DroMel_CAF1	18,281,198 – 18,281,289	- - - - - - - - -	11245	18,281,198 – 18,281,289	-	6	102	88.80	-2.67	0.80	0.818308
6933	3R_DroMel_CAF1	18,282,082 – 18,282,219	- - - - - - - - -	11246	18,282,082 – 18,282,193	+	5	111	83.41	-2.59	0.62	0.916674
				11247	18,282,082 – 18,282,193	-	5	111	83.41	-2.00	0.62	0.646564
				11248	18,282,113 – 18,282,219	+	4	119	69.80	-2.90	0.63	0.999941
				11249	18,282,113 – 18,282,219	-	4	119	69.80	-1.93	0.51	0.881865
6934	3R_DroMel_CAF1	18,284,036 – 18,284,143	- - - "knownCDS=Parent=FBtr0084250;Name=CG31160-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31160-RA" - - - - -	11250	18,284,036 – 18,284,143	-	6	120	80.64	-1.67	0.61	0.570028
6935	3R_DroMel_CAF1	18,284,436 – 18,284,534	- - - "knownCDS=Parent=FBtr0084250;Name=CG31160-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31160-RA" - - - - -	11251	18,284,436 – 18,284,534	+	4	98	75.68	-1.95	0.57	0.779521
6936	3R_DroMel_CAF1	18,288,136 – 18,288,226	- - - - - - - - -	11252	18,288,136 – 18,288,226	+	5	92	89.93	-1.49	0.78	0.588981
6937	3R_DroMel_CAF1	18,291,038 – 18,291,179	- - - "knownCDS=Parent=FBtr0084254;Name=CG7054-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7054-RA" - - - - -	11253	18,291,038 – 18,291,149	-	6	111	82.82	-2.44	0.60	0.621021
6937	3R_DroMel_CAF1	18,291,038 – 18,291,179		11254	18,291,078 – 18,291,179	-	6	113	74.88	-2.47	0.48	0.977857
6938	3R_DroMel_CAF1	18,294,653 – 18,294,744	- - - - - - - - -	11255	18,294,653 – 18,294,744	+	4	93	95.11	-2.21	0.85	0.866557
6938	3R_DroMel_CAF1	18,294,653 – 18,294,744	- - - - - - - - -	11256	18,294,653 – 18,294,744	-	4	93	95.11	-2.44	0.81	0.783059
6939	3R_DroMel_CAF1	18,294,785 – 18,294,880	- - - - - - - - -	11257	18,294,785 – 18,294,880	+	6	105	76.60	-2.83	0.47	0.986004
6940	3R_DroMel_CAF1	18,299,104 – 18,299,217	- - - - - - - - -	11258	18,299,104 – 18,299,217	+	5	113	94.69	-1.56	0.93	0.976037
6941	3R_DroMel_CAF1	18,299,444 – 18,299,550	- - - - - - - - -	11259	18,299,444 – 18,299,550	+	6	117	86.24	-1.28	0.90	0.509019
6942	3R_DroMel_CAF1	18,308,851 – 18,309,092	- - - "knownCDS=Parent=FBtr0084256;Name=Nrx-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7050-RA" - - - - -	11260	18,308,851 – 18,308,950	-	6	99	81.08	-1.49	0.71	0.669868
				11261	18,308,950 – 18,309,061	-	6	117	75.82	-1.69	0.64	0.901004
				11262	18,308,987 – 18,309,092	-	6	117	77.43	-3.52	0.57	0.995437
6943	3R_DroMel_CAF1	18,310,718 – 18,310,815	- - - - - - - - -	11263	18,310,718 – 18,310,815	+	6	116	77.79	-1.30	0.70	0.762232
6944	3R_DroMel_CAF1	18,315,604 – 18,315,705	- - - - - - - - -	11264	18,315,604 – 18,315,705	-	6	111	77.34	-1.58	0.56	0.541700
6945	3R_DroMel_CAF1	18,316,465 – 18,316,570	- - - - - - - - -	11265	18,316,465 – 18,316,570	-	6	105	79.40	-1.53	0.73	0.819343
6946	3R_DroMel_CAF1	18,319,613 – 18,319,720	- - - - - - - - -	11266	18,319,613 – 18,319,720	-	5	113	90.65	-1.60	0.76	0.575922
6947	3R_DroMel_CAF1	18,320,674 – 18,320,777	- - - - - - - - -	11267	18,320,674 – 18,320,777	-	6	109	72.83	-1.90	0.56	0.940066
6948	3R_DroMel_CAF1	18,321,552 – 18,321,654	- - - - - - - - -	11268	18,321,552 – 18,321,654	+	4	120	68.02	-1.97	0.62	0.994590
6949	3R_DroMel_CAF1	18,322,373 – 18,322,519	- - - - - - - - -	11269	18,322,373 – 18,322,479	-	6	118	84.55	-3.16	0.81	0.945601
6949	3R_DroMel_CAF1	18,322,373 – 18,322,519	- - - - - - - - -	11270	18,322,413 – 18,322,519	+	5	118	87.18	-1.63	0.74	0.579326
6950	3R_DroMel_CAF1	18,323,529 – 18,323,638	- - - - - - - - -	11271	18,323,529 – 18,323,638	+	5	113	82.21	-1.83	0.63	0.607971
6951	3R_DroMel_CAF1	18,325,335 – 18,325,444	- - - - - - - - -	11272	18,325,335 – 18,325,444	+	6	115	82.18	-2.63	0.53	0.646218
6951	3R_DroMel_CAF1	18,325,335 – 18,325,444	- - - - - - - - -	11273	18,325,335 – 18,325,444	-	6	115	82.18	-2.32	0.68	0.800800
6952	3R_DroMel_CAF1	18,325,940 – 18,326,093	- - - - - - - - -	11274	18,325,940 – 18,326,053	+	6	120	79.48	-2.31	0.69	0.942808
6952	3R_DroMel_CAF1	18,325,940 – 18,326,093	- - - - - - - - -	11275	18,325,980 – 18,326,093	+	5	113	88.05	-1.39	0.87	0.606240
6953	3R_DroMel_CAF1	18,326,793 – 18,326,920	- - - - - - - - -	11276	18,326,793 – 18,326,889	-	5	116	81.35	-1.73	0.67	0.643829
6953	3R_DroMel_CAF1	18,326,793 – 18,326,920	- - - - - - - - -	11277	18,326,828 – 18,326,920	-	4	95	96.08	-4.77	0.85	0.685096
6954	3R_DroMel_CAF1	18,326,968 – 18,327,068	- - - - - - - - -	11278	18,326,968 – 18,327,068	-	6	102	93.77	-1.48	0.86	0.629065
6955	3R_DroMel_CAF1	18,328,943 – 18,329,041	- - - - - - - - -	11279	18,328,943 – 18,329,041	-	6	120	77.16	-0.93	0.75	0.627247
6956	3R_DroMel_CAF1	18,330,460 – 18,330,595	- - - - - - - - -	11280	18,330,460 – 18,330,556	+	5	113	86.13	-2.46	0.74	0.945157
6956	3R_DroMel_CAF1	18,330,460 – 18,330,595	- - - - - - - - -	11281	18,330,481 – 18,330,595	+	5	117	88.25	-2.13	0.68	0.601439
6957	3R_DroMel_CAF1	18,330,659 – 18,330,766	- - - - - - - - -	11282	18,330,659 – 18,330,766	-	5	113	93.41	-1.44	0.94	0.959722
6958	3R_DroMel_CAF1	18,330,903 – 18,331,015	- - - - - - - - -	11283	18,330,903 – 18,331,015	-	6	120	88.93	-1.66	0.84	0.547909
6959	3R_DroMel_CAF1	18,332,163 – 18,332,282	- - - - - - - - -	11284	18,332,163 – 18,332,282	+	5	120	74.20	-1.98	0.47	0.881903
6960	3R_DroMel_CAF1	18,332,322 – 18,332,418	- - - - - - - - -	11285	18,332,322 – 18,332,418	-	5	111	70.11	-1.71	0.27	0.519370
6961	3R_DroMel_CAF1	18,332,697 – 18,332,789	- - - - - - - - -	11286	18,332,697 – 18,332,789	+	5	92	95.11	-1.26	0.86	0.550617
6961	3R_DroMel_CAF1	18,332,697 – 18,332,789	- - - - - - - - -	11287	18,332,697 – 18,332,789	-	5	92	95.11	-2.42	0.84	0.993243
6962	3R_DroMel_CAF1	18,334,454 – 18,334,564	- - - - - - - - -	11288	18,334,454 – 18,334,564	-	5	118	88.69	-1.66	0.80	0.764819
6963	3R_DroMel_CAF1	18,334,796 – 18,334,928	- - - - - - - - -	11289	18,334,796 – 18,334,915	+	5	120	96.66	-2.61	0.90	0.999339
				11290	18,334,796 – 18,334,915	-	5	120	96.66	-1.54	0.95	0.970167
				11291	18,334,835 – 18,334,928	+	5	98	93.89	-2.19	0.88	0.997714
				11292	18,334,835 – 18,334,928	-	5	98	93.89	-1.21	0.91	0.717487
6964	3R_DroMel_CAF1	18,342,733 – 18,342,824	- - - - - - - - -	11293	18,342,733 – 18,342,824	-	4	91	94.14	-1.65	0.85	0.630836
6965	3R_DroMel_CAF1	18,359,394 – 18,359,491	- - - "knownCDS=Parent=FBtr0084285, FBtr0084286;Name=CG5326-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5326-RA, FlyBase+Annotation+IDs:CG5326-RB" - - - - -	11294	18,359,394 – 18,359,491	+	6	120	75.67	-1.74	0.67	0.938662
6966	3R_DroMel_CAF1	18,372,643 – 18,372,788	- - - "knownCDS=Parent=FBtr0084283;Name=CG5315-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5315-RC" - - - - -	11295	18,372,643 – 18,372,748	+	6	105	79.73	-1.85	0.58	0.672545
				11296	18,372,643 – 18,372,748	-	6	105	79.73	-1.61	0.70	0.797019
				11297	18,372,677 – 18,372,788	+	6	111	77.75	-1.11	0.69	0.582741
6967	3R_DroMel_CAF1	18,374,217 – 18,374,399	- - - - - - - - -	11298	18,374,217 – 18,374,319	-	5	102	93.92	-2.78	0.76	0.930510
				11299	18,374,239 – 18,374,359	+	5	120	94.33	-1.95	0.77	0.714925
				11300	18,374,239 – 18,374,359	-	5	120	94.33	-2.40	0.79	0.958151
				11301	18,374,279 – 18,374,399	-	5	120	94.17	-1.73	0.77	0.546435
6968	3R_DroMel_CAF1	18,374,851 – 18,374,956	- - - - - - - - -	11302	18,374,851 – 18,374,956	-	5	108	80.54	-2.14	0.60	0.857558
6969	3R_DroMel_CAF1	18,376,895 – 18,376,998	- - - - - - - - -	11303	18,376,895 – 18,376,998	+	6	117	78.80	-2.39	0.61	0.947356
6970	3R_DroMel_CAF1	18,378,808 – 18,378,902	- - - - - - - - -	11304	18,378,808 – 18,378,902	+	4	98	92.36	-2.90	0.76	0.865543
6971	3R_DroMel_CAF1	18,379,052 – 18,379,153	- - - - - - - - -	11305	18,379,052 – 18,379,153	+	4	106	77.49	-2.28	0.51	0.774921
6972	3R_DroMel_CAF1	18,384,817 – 18,384,928	- - - "knownCDS=Parent=FBtr0084281;Name=CG5278-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5278-RA" - - - - -	11306	18,384,817 – 18,384,928	-	6	120	83.62	-2.40	0.64	0.580041
6973	3R_DroMel_CAF1	18,385,827 – 18,385,918	- - - "knownCDS=Parent=FBtr0084281;Name=CG5278-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5278-RA" - - - - -	11307	18,385,827 – 18,385,918	-	6	98	80.59	-1.09	0.88	0.524047
6974	3R_DroMel_CAF1	18,388,974 – 18,389,080	- - - - - - - - -	11308	18,388,974 – 18,389,080	+	4	108	82.55	-1.52	0.68	0.500000
6974	3R_DroMel_CAF1	18,388,974 – 18,389,080	- - - - - - - - -	11309	18,388,974 – 18,389,080	-	4	108	82.55	-2.02	0.81	0.919810
6975	3R_DroMel_CAF1	18,400,465 – 18,400,562	- - - "knownCDS=Parent=FBtr0084264;Name=CG33110-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33110-RA" - - - - -	11310	18,400,465 – 18,400,562	+	6	106	78.90	-0.93	0.78	0.544079
6976	3R_DroMel_CAF1	18,403,611 – 18,403,725	- - - - - - - - -	11311	18,403,611 – 18,403,725	+	5	114	80.20	-1.77	0.60	0.582942
6977	3R_DroMel_CAF1	18,403,797 – 18,403,946	- - - - - - - - -	11312	18,403,797 – 18,403,913	+	5	118	88.76	-2.20	0.69	0.659970
6977	3R_DroMel_CAF1	18,403,797 – 18,403,946	- - - - - - - - -	11313	18,403,836 – 18,403,946	+	5	112	91.79	-2.63	0.71	0.786562
6978	3R_DroMel_CAF1	18,408,038 – 18,408,158	- - - "knownCDS=Parent=FBtr0084280;Name=Dph5-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31289-RA" - - - - -	11314	18,408,038 – 18,408,158	-	6	120	76.56	-1.36	0.67	0.780116
6979	3R_DroMel_CAF1	18,409,577 – 18,409,681	- - - "knownCDS=Parent=FBtr0084279;Name=CG33107-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33107-RA" - - - - -	11315	18,409,577 – 18,409,681	-	6	112	79.56	-1.93	0.71	0.902901
6980	3R_DroMel_CAF1	18,411,653 – 18,411,801	- - - "knownCDS=Parent=FBtr0084266;Name=CG6937-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6937-RA" - - - - -	11316	18,411,653 – 18,411,748	-	6	99	78.34	-2.63	0.53	0.958638
				11317	18,411,677 – 18,411,785	-	3	116	67.35	-1.78	0.66	0.998644
				11318	18,411,708 – 18,411,801	+	6	98	76.78	-2.04	0.45	0.635737
6981	3R_DroMel_CAF1	18,418,254 – 18,418,392	- - - - - - - - -	11319	18,418,254 – 18,418,368	-	5	120	82.66	-2.58	0.51	0.805816
6981	3R_DroMel_CAF1	18,418,254 – 18,418,392	- - - - - - - - -	11320	18,418,289 – 18,418,392	+	5	120	73.96	-1.88	0.41	0.770733
6982	3R_DroMel_CAF1	18,418,429 – 18,418,525	- - - - - - - - -	11321	18,418,429 – 18,418,525	-	5	111	70.33	-1.55	0.65	0.892951
6983	3R_DroMel_CAF1	18,418,908 – 18,419,017	- - - - - - - - -	11322	18,418,908 – 18,419,017	+	6	120	77.76	-2.26	0.60	0.952820
6984	3R_DroMel_CAF1	18,419,362 – 18,419,500	- - - - - - - - -	11323	18,419,362 – 18,419,472	+	5	120	72.33	-1.58	0.55	0.534922
6984	3R_DroMel_CAF1	18,419,362 – 18,419,500	- - - - - - - - -	11324	18,419,400 – 18,419,500	+	5	120	77.11	-1.67	0.72	0.869084
6985	3R_DroMel_CAF1	18,420,777 – 18,420,870	- - - - - - - - -	11325	18,420,777 – 18,420,870	+	5	93	70.31	-2.65	0.66	0.999165
6985	3R_DroMel_CAF1	18,420,777 – 18,420,870	- - - - - - - - -	11326	18,420,777 – 18,420,870	-	5	93	70.31	-2.26	0.49	0.989886
6986	3R_DroMel_CAF1	18,425,862 – 18,425,966	- - - "knownCDS=Parent=FBtr0084267;Name=CG31158-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31158-RA" - - - - -	11327	18,425,862 – 18,425,966	-	6	117	75.43	-2.42	0.49	0.971160
6987	3R_DroMel_CAF1	18,430,263 – 18,430,356	- - - - - - - - -	11328	18,430,263 – 18,430,356	-	6	98	82.21	-1.58	0.81	0.704612
6988	3R_DroMel_CAF1	18,430,514 – 18,430,605	- - - "knownCDS=Parent=FBtr0084268;Name=CG31158-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31158-RB" - - - - -	11329	18,430,514 – 18,430,605	+	6	100	79.30	-2.41	0.86	0.964134
6988	3R_DroMel_CAF1	18,430,514 – 18,430,605		11330	18,430,514 – 18,430,605	-	6	100	79.30	-1.80	0.71	0.889050
6989	3R_DroMel_CAF1	18,430,725 – 18,430,825	- - - "knownCDS=Parent=FBtr0084267;Name=CG31158-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31158-RA" - - - - -	11331	18,430,725 – 18,430,825	+	6	107	80.74	-1.77	0.70	0.796190
6990	3R_DroMel_CAF1	18,431,067 – 18,431,167	- - - "knownCDS=Parent=FBtr0084268;Name=CG31158-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31158-RB" - - - - -	11332	18,431,067 – 18,431,167	-	6	105	77.15	-1.65	0.56	0.613745
6991	3R_DroMel_CAF1	18,431,517 – 18,431,624	- - - - - - - - -	11333	18,431,517 – 18,431,624	-	5	107	83.08	-2.03	0.76	0.888345
6992	3R_DroMel_CAF1	18,445,425 – 18,445,519	- - - - - - - - -	11334	18,445,425 – 18,445,519	+	6	107	72.88	-1.64	0.58	0.871321
6993	3R_DroMel_CAF1	18,446,429 – 18,446,549	- - "RNAmicro=f:18446429_t:18446548_strand:+_p:0.692189" "knownCDS=Parent=FBtr0084275, FBtr0084276;Name=loco-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5248-RB, FlyBase+Annotation+IDs:CG5248-RC" - - - - -	11335	18,446,429 – 18,446,549	+	6	120	81.83	-2.22	0.64	0.767756
6993	3R_DroMel_CAF1	18,446,429 – 18,446,549		11336	18,446,429 – 18,446,549	-	6	120	81.83	-2.52	0.52	0.616986
6994	3R_DroMel_CAF1	18,446,997 – 18,447,130	- - - "knownCDS=Parent=FBtr0084275, FBtr0084276;Name=loco-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5248-RB, FlyBase+Annotation+IDs:CG5248-RC" - - - - -	11337	18,446,997 – 18,447,090	+	6	102	81.25	-2.16	0.60	0.742678
				11338	18,446,997 – 18,447,090	-	6	102	81.25	-2.63	0.58	0.851306
				11339	18,447,019 – 18,447,130	+	6	120	76.26	-1.90	0.53	0.792024
				11340	18,447,019 – 18,447,130	-	6	120	76.26	-1.89	0.54	0.807547
6995	3R_DroMel_CAF1	18,449,295 – 18,449,391	- - - - - - - - -	11341	18,449,295 – 18,449,391	-	6	101	92.63	-1.41	0.96	0.978633
6996	3R_DroMel_CAF1	18,457,169 – 18,457,259	- - - - - - - - -	11342	18,457,169 – 18,457,259	-	5	93	78.98	-1.73	0.57	0.521812
6997	3R_DroMel_CAF1	18,460,823 – 18,460,998	- - - - - - - - -	11343	18,460,823 – 18,460,925	+	3	115	80.67	-1.54	0.72	0.576009
6997	3R_DroMel_CAF1	18,460,823 – 18,460,998	- - - - - - - - -	11344	18,460,887 – 18,460,998	+	5	114	89.09	-2.32	0.76	0.940165
6998	3R_DroMel_CAF1	18,465,764 – 18,465,924	- - - - - - - - -	11345	18,465,764 – 18,465,884	-	5	120	93.33	-1.13	0.93	0.643414
6998	3R_DroMel_CAF1	18,465,764 – 18,465,924	- - - - - - - - -	11346	18,465,804 – 18,465,924	-	5	120	97.33	-1.25	0.96	0.787268
6999	3R_DroMel_CAF1	18,466,140 – 18,466,243	- - - - - - - - -	11347	18,466,140 – 18,466,243	+	5	120	82.40	-2.43	0.83	0.984350
7000	3R_DroMel_CAF1	18,466,296 – 18,466,416	- - - - - - - - -	11348	18,466,296 – 18,466,416	+	5	120	89.87	-1.88	0.78	0.860799
7001	3R_DroMel_CAF1	18,467,963 – 18,468,070	- - - - - - - - -	11349	18,467,963 – 18,468,070	+	5	120	91.27	-2.06	0.71	0.582567
7002	3R_DroMel_CAF1	18,468,374 – 18,468,510	- - - - - - - - -	11350	18,468,374 – 18,468,470	+	5	120	78.43	-2.17	0.64	0.951086
7002	3R_DroMel_CAF1	18,468,374 – 18,468,510	- - - - - - - - -	11351	18,468,395 – 18,468,510	+	5	120	88.28	-1.81	0.69	0.528518
7003	3R_DroMel_CAF1	18,471,467 – 18,471,660	- - - - - - - - -	11352	18,471,467 – 18,471,580	-	5	120	88.49	-1.65	0.73	0.549459
7003	3R_DroMel_CAF1	18,471,467 – 18,471,660	- - - - - - - - -	11353	18,471,540 – 18,471,660	-	5	120	97.17	-1.30	0.87	0.512291
7004	3R_DroMel_CAF1	18,472,195 – 18,472,309	- - - - - - - - -	11354	18,472,195 – 18,472,309	-	3	114	79.19	-1.23	0.78	0.512830
7005	3R_DroMel_CAF1	18,472,920 – 18,473,040	- - - - - - - - -	11355	18,472,920 – 18,473,040	+	3	120	91.85	-2.36	0.92	0.938546
7006	3R_DroMel_CAF1	18,473,075 – 18,473,235	- - - - - - - - -	11356	18,473,075 – 18,473,195	+	5	120	92.47	-1.52	0.83	0.775455
7006	3R_DroMel_CAF1	18,473,075 – 18,473,235	- - - - - - - - -	11357	18,473,115 – 18,473,235	+	5	120	93.47	-1.65	0.82	0.851283
7007	3R_DroMel_CAF1	18,473,852 – 18,474,031	- - - - - - - - -	11358	18,473,852 – 18,473,961	+	5	118	77.50	-2.11	0.49	0.865085
7007	3R_DroMel_CAF1	18,473,852 – 18,474,031	- - - - - - - - -	11359	18,473,921 – 18,474,031	-	4	110	90.00	-1.66	0.72	0.552111
7008	3R_DroMel_CAF1	18,474,242 – 18,474,343	- - - - - - - - -	11360	18,474,242 – 18,474,343	+	5	109	78.18	-2.03	0.64	0.916830
7009	3R_DroMel_CAF1	18,474,970 – 18,475,090	- - - - - - - - -	11361	18,474,970 – 18,475,090	+	5	120	97.25	-3.27	0.93	0.999892
7009	3R_DroMel_CAF1	18,474,970 – 18,475,090	- - - - - - - - -	11362	18,474,970 – 18,475,090	-	5	120	97.25	-2.13	0.93	0.997884
7010	3R_DroMel_CAF1	18,475,130 – 18,475,226	- - - - - - - - -	11363	18,475,130 – 18,475,226	-	5	120	73.62	-1.93	0.22	0.907492
7011	3R_DroMel_CAF1	18,475,665 – 18,475,785	- - - - - - - - -	11364	18,475,665 – 18,475,785	+	5	120	97.83	-2.37	0.92	0.998512
7012	3R_DroMel_CAF1	18,476,989 – 18,477,087	- - - - - - - - -	11365	18,476,989 – 18,477,087	-	5	120	78.80	-1.79	0.56	0.555132
7013	3R_DroMel_CAF1	18,477,193 – 18,477,294	- - - - - - - - -	11366	18,477,193 – 18,477,294	-	5	120	89.84	-2.01	0.71	0.619738
7014	3R_DroMel_CAF1	18,477,627 – 18,477,764	- - - - - - - - -	11367	18,477,627 – 18,477,724	+	4	107	78.53	-1.75	0.61	0.556327
7014	3R_DroMel_CAF1	18,477,627 – 18,477,764	- - - - - - - - -	11368	18,477,667 – 18,477,764	-	5	120	75.31	-1.70	0.69	0.915417
7015	3R_DroMel_CAF1	18,478,822 – 18,478,939	- - - - - - - - -	11369	18,478,822 – 18,478,939	-	3	120	78.12	-2.37	0.52	0.545347
7016	3R_DroMel_CAF1	18,482,538 – 18,482,632	- - - - - - - - -	11370	18,482,538 – 18,482,632	-	6	100	73.65	-1.95	0.50	0.877254
7017	3R_DroMel_CAF1	18,483,236 – 18,483,326	- - - - - - - - -	11371	18,483,236 – 18,483,326	+	5	94	93.56	-3.19	0.77	0.980106
7017	3R_DroMel_CAF1	18,483,236 – 18,483,326	- - - - - - - - -	11372	18,483,236 – 18,483,326	-	5	94	93.56	-2.23	0.79	0.933734
7018	3R_DroMel_CAF1	18,490,722 – 18,490,821	- - - "knownCDS=Parent=FBtr0084299;Name=CG17623-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17623-RA" - - - - -	11373	18,490,722 – 18,490,821	+	6	102	80.75	-1.57	0.62	0.531435
7019	3R_DroMel_CAF1	18,491,646 – 18,491,746	- - - - - - - - -	11374	18,491,646 – 18,491,746	+	4	101	93.83	-1.48	0.88	0.581408
7020	3R_DroMel_CAF1	18,493,561 – 18,493,652	- - - - - - - - -	11375	18,493,561 – 18,493,652	-	5	91	91.43	-1.46	0.85	0.780042
7021	3R_DroMel_CAF1	18,503,102 – 18,503,209	- - - "knownCDS=Parent=FBtr0084300;Name=CG6954-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6954-RA" - - - - -	11376	18,503,102 – 18,503,209	+	6	117	76.52	-1.93	0.65	0.951630
7021	3R_DroMel_CAF1	18,503,102 – 18,503,209		11377	18,503,102 – 18,503,209	-	6	117	76.52	-1.26	0.65	0.651098
7022	3R_DroMel_CAF1	18,503,428 – 18,503,539	- - - "knownCDS=Parent=FBtr0084300;Name=CG6954-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6954-RA" - - - - -	11378	18,503,428 – 18,503,539	+	6	114	78.77	-0.99	0.73	0.538400
7023	3R_DroMel_CAF1	18,513,731 – 18,513,851	- - - "knownCDS=Parent=FBtr0084334;Name=wfs1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4917-RA" - - - - -	11379	18,513,731 – 18,513,851	+	6	120	77.06	-1.92	0.54	0.791855
7024	3R_DroMel_CAF1	18,527,345 – 18,527,505	- - - - - - - - -	11380	18,527,345 – 18,527,465	-	5	120	99.42	-1.77	0.99	0.978106
7024	3R_DroMel_CAF1	18,527,345 – 18,527,505	- - - - - - - - -	11381	18,527,385 – 18,527,505	-	5	120	99.00	-1.61	0.93	0.910554
7025	3R_DroMel_CAF1	18,528,211 – 18,528,312	- - - - - - - - -	11382	18,528,211 – 18,528,312	+	4	102	92.87	-2.72	0.83	0.950641
7026	3R_DroMel_CAF1	18,529,619 – 18,529,711	- - - "knownCDS=Parent=FBtr0084305;Name=CG6972-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6972-RA" - - - - -	11383	18,529,619 – 18,529,711	+	6	109	76.73	-1.12	0.66	0.527388
7027	3R_DroMel_CAF1	18,530,113 – 18,530,223	- - - "knownCDS=Parent=FBtr0084331;Name=CG13842-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13842-RA" - - - - -	11384	18,530,113 – 18,530,223	+	6	117	79.45	-1.83	0.62	0.786645
7027	3R_DroMel_CAF1	18,530,113 – 18,530,223		11385	18,530,113 – 18,530,223	-	6	117	79.45	-2.23	0.55	0.821282
7028	3R_DroMel_CAF1	18,535,178 – 18,535,298	- - - "knownCDS=Parent=FBtr0084330;Name=CG4907-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4907-RA" - - - - -	11386	18,535,178 – 18,535,298	+	6	120	77.61	-2.11	0.46	0.648534
7029	3R_DroMel_CAF1	18,536,179 – 18,536,299	- - - "knownCDS=Parent=FBtr0084330;Name=CG4907-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4907-RA" - - - - -	11387	18,536,179 – 18,536,299	-	6	120	81.17	-1.55	0.64	0.572716
7030	3R_DroMel_CAF1	18,537,860 – 18,537,962	- - - "knownCDS=Parent=FBtr0084328;Name=CG31151-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31151-RA" - - - - -	11388	18,537,860 – 18,537,962	-	6	102	80.36	-1.19	0.69	0.516063
7031	3R_DroMel_CAF1	18,537,985 – 18,538,180	- - - "knownCDS=Parent=FBtr0084329;Name=CG31151-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31151-RB" - - - - -	11389	18,537,985 – 18,538,100	-	6	120	76.85	-2.13	0.47	0.785128
7031	3R_DroMel_CAF1	18,537,985 – 18,538,180		11390	18,538,060 – 18,538,180	-	6	120	84.39	-2.93	0.70	0.744652
7032	3R_DroMel_CAF1	18,542,710 – 18,542,806	- - - - - - - - -	11391	18,542,710 – 18,542,806	+	6	119	78.69	-0.92	0.87	0.555559
7032	3R_DroMel_CAF1	18,542,710 – 18,542,806	- - - - - - - - -	11392	18,542,710 – 18,542,806	-	6	119	78.69	-1.56	0.72	0.850658
7033	3R_DroMel_CAF1	18,543,757 – 18,543,849	- - - - - - - - -	11393	18,543,757 – 18,543,849	+	5	115	70.63	-2.67	0.23	0.995859
7033	3R_DroMel_CAF1	18,543,757 – 18,543,849	- - - - - - - - -	11394	18,543,757 – 18,543,849	-	5	115	70.63	-1.99	0.21	0.881462
7034	3R_DroMel_CAF1	18,549,466 – 18,549,558	- - - "knownCDS=Parent=FBtr0084327;Name=Irp-1A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4900-RA" - - - - -	11395	18,549,466 – 18,549,558	-	6	92	83.91	-1.79	0.76	0.598527
7035	3R_DroMel_CAF1	18,550,587 – 18,550,681	- - - - - - - - -	11396	18,550,587 – 18,550,681	+	3	97	92.01	-2.77	0.85	0.904863
7036	3R_DroMel_CAF1	18,560,163 – 18,560,266	- - - "knownCDS=Parent=FBtr0084324;Name=Dcr-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4792-RA" - - - - -	11397	18,560,163 – 18,560,266	-	6	106	77.60	-1.33	0.75	0.845609
7037	3R_DroMel_CAF1	18,563,964 – 18,564,076	- - - "knownCDS=Parent=FBtr0084324;Name=Dcr-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4792-RA" - - - - -	11398	18,563,964 – 18,564,076	+	6	116	78.54	-1.77	0.54	0.576620
7038	3R_DroMel_CAF1	18,570,216 – 18,570,327	- - - "knownCDS=Parent=FBtr0084323;Name=CG4771-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4771-RA" - - - - -	11399	18,570,216 – 18,570,327	-	6	111	84.02	-2.31	0.71	0.649824
7039	3R_DroMel_CAF1	18,571,408 – 18,571,506	- - - - - - - - -	11400	18,571,408 – 18,571,506	+	6	104	80.99	-1.51	0.68	0.635438
7040	3R_DroMel_CAF1	18,576,402 – 18,576,615	- - - - - - - - -	11401	18,576,402 – 18,576,502	-	4	102	78.62	-2.24	0.78	0.985045
				11402	18,576,502 – 18,576,615	+	6	115	74.13	-2.49	0.54	0.991045
				11403	18,576,502 – 18,576,615	-	6	115	74.13	-2.49	0.52	0.989820
7041	3R_DroMel_CAF1	18,581,275 – 18,581,372	- - - - - - - - -	11404	18,581,275 – 18,581,372	-	4	107	83.49	-2.02	0.59	0.561063
7042	3R_DroMel_CAF1	18,583,809 – 18,583,912	- - - - - - - - -	11405	18,583,809 – 18,583,912	-	3	103	92.11	-2.38	0.84	0.797076
7043	3R_DroMel_CAF1	18,593,760 – 18,593,851	- - - - - - - - -	11406	18,593,760 – 18,593,851	-	5	93	82.39	-1.82	0.65	0.645275
7044	3R_DroMel_CAF1	18,594,749 – 18,594,959	- - - - - - - - -	11407	18,594,749 – 18,594,847	-	5	110	78.77	-1.97	0.57	0.783265
				11408	18,594,825 – 18,594,919	+	5	103	80.46	-2.38	0.43	0.812785
				11409	18,594,825 – 18,594,919	-	5	103	80.46	-2.16	0.59	0.858244
				11410	18,594,847 – 18,594,959	+	5	112	87.95	-2.06	0.75	0.863145
7045	3R_DroMel_CAF1	18,602,311 – 18,602,406	- - - - - - - - -	11411	18,602,311 – 18,602,406	+	5	107	88.90	-1.48	0.77	0.542176
7046	3R_DroMel_CAF1	18,604,807 – 18,604,920	- - - - - - - - -	11412	18,604,807 – 18,604,920	+	5	117	74.25	-1.44	0.11	0.593072
7047	3R_DroMel_CAF1	18,609,435 – 18,609,534	- - - - - - - - -	11413	18,609,435 – 18,609,534	+	6	116	68.93	-1.72	0.50	0.855931
7048	3R_DroMel_CAF1	18,621,133 – 18,621,228	- - - - - - - - -	11414	18,621,133 – 18,621,228	+	5	96	81.73	-3.25	0.64	0.995152
7048	3R_DroMel_CAF1	18,621,133 – 18,621,228	- - - - - - - - -	11415	18,621,133 – 18,621,228	-	5	96	81.73	-2.55	0.59	0.935543
7049	3R_DroMel_CAF1	18,621,306 – 18,621,403	- - - - - - - - -	11416	18,621,306 – 18,621,403	+	6	100	79.81	-2.66	0.74	0.959267
7049	3R_DroMel_CAF1	18,621,306 – 18,621,403	- - - - - - - - -	11417	18,621,306 – 18,621,403	-	6	100	79.81	-1.91	0.58	0.707378
7050	3R_DroMel_CAF1	18,624,754 – 18,624,853	- - - - - - - - -	11418	18,624,754 – 18,624,853	+	5	111	92.58	-1.28	0.89	0.745956
7051	3R_DroMel_CAF1	18,625,645 – 18,625,754	- - - - - - - - -	11419	18,625,645 – 18,625,754	+	6	110	97.26	-1.78	0.98	0.999033
7051	3R_DroMel_CAF1	18,625,645 – 18,625,754	- - - - - - - - -	11420	18,625,645 – 18,625,754	-	6	110	97.26	-1.08	0.93	0.792587
7052	3R_DroMel_CAF1	18,626,076 – 18,626,166	- - - - - - - - -	11421	18,626,076 – 18,626,166	+	4	102	88.43	-3.26	0.77	0.978908
7053	3R_DroMel_CAF1	18,634,900 – 18,634,994	- - - - - - - - -	11422	18,634,900 – 18,634,994	-	4	111	67.81	-1.71	0.48	0.645406
7054	3R_DroMel_CAF1	18,635,043 – 18,635,145	- - - - - - - - -	11423	18,635,043 – 18,635,145	+	5	113	77.34	-1.55	0.64	0.564433
7055	3R_DroMel_CAF1	18,636,792 – 18,636,882	- - - - - - - - -	11424	18,636,792 – 18,636,882	+	3	94	66.79	-1.80	0.59	0.993497
7055	3R_DroMel_CAF1	18,636,792 – 18,636,882	- - - - - - - - -	11425	18,636,792 – 18,636,882	-	3	94	66.79	-2.38	0.55	0.999474
7056	3R_DroMel_CAF1	18,637,476 – 18,637,577	- - - - - - - - -	11426	18,637,476 – 18,637,577	+	5	109	79.08	-1.97	0.47	0.605697
7057	3R_DroMel_CAF1	18,643,952 – 18,644,067	- - - - - - - - -	11427	18,643,952 – 18,644,055	+	6	117	79.25	-1.97	0.54	0.670744
7057	3R_DroMel_CAF1	18,643,952 – 18,644,067	- - - - - - - - -	11428	18,643,976 – 18,644,067	-	6	120	76.58	-1.30	0.65	0.664316
7058	3R_DroMel_CAF1	18,645,462 – 18,645,559	- - - - - - - - -	11429	18,645,462 – 18,645,559	+	6	99	78.59	-1.96	0.51	0.587749
7059	3R_DroMel_CAF1	18,647,293 – 18,647,384	- - - - - - - - -	11430	18,647,293 – 18,647,384	-	6	93	81.30	-1.18	0.93	0.567796
7060	3R_DroMel_CAF1	18,651,172 – 18,651,288	- - - - - - - - -	11431	18,651,172 – 18,651,288	-	5	116	93.53	-1.30	0.85	0.622471
7061	3R_DroMel_CAF1	18,654,049 – 18,654,161	- - - - - - - - -	11432	18,654,049 – 18,654,161	+	5	117	87.81	-1.45	0.84	0.621827
7062	3R_DroMel_CAF1	18,655,717 – 18,655,829	- - - - - - - - -	11433	18,655,717 – 18,655,829	+	6	114	73.79	-2.43	0.58	0.991909
7063	3R_DroMel_CAF1	18,655,891 – 18,656,020	- - - - - - - - -	11434	18,655,891 – 18,656,001	-	6	117	84.21	-2.13	0.71	0.573974
7063	3R_DroMel_CAF1	18,655,891 – 18,656,020	- - - - - - - - -	11435	18,655,925 – 18,656,020	-	6	98	77.10	-2.10	0.66	0.963990
7064	3R_DroMel_CAF1	18,661,700 – 18,661,791	- - - - - - - - -	11436	18,661,700 – 18,661,791	-	6	99	83.82	-1.66	0.73	0.525143
7065	3R_DroMel_CAF1	18,662,633 – 18,662,747	- - - - - - - - -	11437	18,662,633 – 18,662,747	+	4	114	74.69	-1.14	0.80	0.600731
7066	3R_DroMel_CAF1	18,667,800 – 18,667,921	- - - - - - - - -	11438	18,667,800 – 18,667,902	-	6	115	81.56	-1.50	0.65	0.535641
7066	3R_DroMel_CAF1	18,667,800 – 18,667,921	- - - - - - - - -	11439	18,667,825 – 18,667,921	-	6	117	81.02	-1.38	0.68	0.579488
7067	3R_DroMel_CAF1	18,671,993 – 18,672,103	- - - - - - - - -	11440	18,671,993 – 18,672,103	+	3	113	90.48	-2.53	0.79	0.764390
7068	3R_DroMel_CAF1	18,672,989 – 18,673,079	- - - - - - - - -	11441	18,672,989 – 18,673,079	+	6	111	78.20	-1.78	0.61	0.811693
7069	3R_DroMel_CAF1	18,674,961 – 18,675,057	- - - - - - - - -	11442	18,674,961 – 18,675,057	+	6	100	85.89	-1.99	0.85	0.813995
7069	3R_DroMel_CAF1	18,674,961 – 18,675,057	- - - - - - - - -	11443	18,674,961 – 18,675,057	-	6	100	85.89	-1.60	0.83	0.553672
7070	3R_DroMel_CAF1	18,676,025 – 18,676,129	- - - - - - - - -	11444	18,676,025 – 18,676,129	-	4	104	95.51	-2.70	0.95	0.987710
7071	3R_DroMel_CAF1	18,676,321 – 18,676,419	- - - - - - - - -	11445	18,676,321 – 18,676,419	-	6	108	89.01	-3.18	0.78	0.871211
7072	3R_DroMel_CAF1	18,676,511 – 18,676,608	- - - - - - - - -	11446	18,676,511 – 18,676,608	-	3	105	71.24	-2.10	0.51	0.829839
7073	3R_DroMel_CAF1	18,676,810 – 18,676,915	- - - - - - - - -	11447	18,676,810 – 18,676,915	-	5	118	74.21	-1.77	0.11	0.871388
7074	3R_DroMel_CAF1	18,678,174 – 18,678,277	- - - - - - - - -	11448	18,678,174 – 18,678,277	-	3	103	89.00	-2.24	0.83	0.768964
7075	3R_DroMel_CAF1	18,678,533 – 18,678,627	- - - - - - - - -	11449	18,678,533 – 18,678,627	+	6	98	75.95	-2.07	0.51	0.885423
7075	3R_DroMel_CAF1	18,678,533 – 18,678,627	- - - - - - - - -	11450	18,678,533 – 18,678,627	-	6	98	75.95	-1.94	0.49	0.733266
7076	3R_DroMel_CAF1	18,680,833 – 18,680,929	- - - - - - - - -	11451	18,680,833 – 18,680,929	-	5	96	93.11	-1.84	0.81	0.908026
7077	3R_DroMel_CAF1	18,681,446 – 18,681,537	- - - - - - - - -	11452	18,681,446 – 18,681,537	+	5	97	79.23	-2.19	0.55	0.888823
7078	3R_DroMel_CAF1	18,682,785 – 18,682,878	- - - - - - - - -	11453	18,682,785 – 18,682,878	-	6	93	94.62	-1.59	0.87	0.780018
7079	3R_DroMel_CAF1	18,683,244 – 18,683,345	- - - - - - - - -	11454	18,683,244 – 18,683,345	+	6	120	76.33	-1.67	0.62	0.847790
7080	3R_DroMel_CAF1	18,686,924 – 18,687,022	- - - - - - - - -	11455	18,686,924 – 18,687,022	-	5	98	97.14	-1.12	0.95	0.573044
7081	3R_DroMel_CAF1	18,687,257 – 18,687,359	- - - - - - - - -	11456	18,687,257 – 18,687,359	+	6	110	77.47	-1.85	0.55	0.746111
7082	3R_DroMel_CAF1	18,688,144 – 18,688,275	- - - - - - - - -	11457	18,688,144 – 18,688,246	-	4	102	86.67	-1.64	0.86	0.764816
7082	3R_DroMel_CAF1	18,688,144 – 18,688,275	- - - - - - - - -	11458	18,688,184 – 18,688,275	-	6	115	80.43	-2.12	0.56	0.720995
7083	3R_DroMel_CAF1	18,688,800 – 18,688,900	- - - - - - - - -	11459	18,688,800 – 18,688,900	+	5	102	90.93	-2.42	0.82	0.992637
7083	3R_DroMel_CAF1	18,688,800 – 18,688,900	- - - - - - - - -	11460	18,688,800 – 18,688,900	-	5	102	90.93	-2.90	0.91	0.999926
7084	3R_DroMel_CAF1	18,691,018 – 18,691,115	- - - - - - - - -	11461	18,691,018 – 18,691,115	+	6	110	70.24	-3.12	0.28	0.994553
7085	3R_DroMel_CAF1	18,692,048 – 18,692,164	- - - - - - - - -	11462	18,692,048 – 18,692,164	-	4	117	89.30	-1.40	0.78	0.518667
7086	3R_DroMel_CAF1	18,696,785 – 18,696,903	- - - - - - - - -	11463	18,696,785 – 18,696,903	+	5	118	94.06	-1.61	0.83	0.844260
7087	3R_DroMel_CAF1	18,697,659 – 18,697,756	- - - - - - - - -	11464	18,697,659 – 18,697,756	-	6	103	76.48	-2.08	0.59	0.944452
7088	3R_DroMel_CAF1	18,699,270 – 18,699,373	- - - - - - - - -	11465	18,699,270 – 18,699,373	+	5	106	91.13	-1.62	0.75	0.570433
7089	3R_DroMel_CAF1	18,700,382 – 18,700,492	- - - - - - - - -	11466	18,700,382 – 18,700,492	+	3	119	78.45	-1.79	0.65	0.787689
7089	3R_DroMel_CAF1	18,700,382 – 18,700,492	- - - - - - - - -	11467	18,700,382 – 18,700,492	-	3	119	78.45	-2.43	0.58	0.909182
7090	3R_DroMel_CAF1	18,700,589 – 18,700,690	- - - - - - - - -	11468	18,700,589 – 18,700,690	-	6	101	97.36	-1.68	0.95	0.994289
7091	3R_DroMel_CAF1	18,704,656 – 18,704,754	- - - - - - - - -	11469	18,704,656 – 18,704,754	-	4	103	80.53	-2.30	0.67	0.956793
7092	3R_DroMel_CAF1	18,710,910 – 18,711,007	- - - - - - - - -	11470	18,710,910 – 18,711,007	+	6	97	93.54	-1.84	0.82	0.539444
7093	3R_DroMel_CAF1	18,711,616 – 18,711,784	- - - - - - - - -	11471	18,711,616 – 18,711,726	+	6	118	68.90	-1.17	0.62	0.680112
				11472	18,711,656 – 18,711,762	+	6	114	84.43	-1.96	0.79	0.690401
				11473	18,711,656 – 18,711,762	-	6	114	84.43	-2.24	0.69	0.529000
				11474	18,711,688 – 18,711,784	+	6	96	90.49	-1.62	0.92	0.942624
7094	3R_DroMel_CAF1	18,712,519 – 18,712,620	- - - - - - - - -	11475	18,712,519 – 18,712,620	+	6	111	74.74	-1.30	0.60	0.529466
7095	3R_DroMel_CAF1	18,713,593 – 18,713,684	- - - - - - - - -	11476	18,713,593 – 18,713,684	+	6	104	79.55	-1.72	0.69	0.836470
7096	3R_DroMel_CAF1	18,715,593 – 18,715,695	- - - - - - - - -	11477	18,715,593 – 18,715,695	-	5	115	78.36	-1.92	0.64	0.861938
7097	3R_DroMel_CAF1	18,721,695 – 18,721,790	- - - - - - - - -	11478	18,721,695 – 18,721,790	+	6	113	76.77	-2.55	0.64	0.986658
7098	3R_DroMel_CAF1	18,722,231 – 18,722,324	- - - - - - - - -	11479	18,722,231 – 18,722,324	+	5	94	94.00	-1.36	0.86	0.744073
7098	3R_DroMel_CAF1	18,722,231 – 18,722,324	- - - - - - - - -	11480	18,722,231 – 18,722,324	-	5	94	94.00	-3.09	0.82	0.997957
7099	3R_DroMel_CAF1	18,724,757 – 18,724,887	- - - - - - - - -	11481	18,724,757 – 18,724,856	+	5	106	85.31	-1.58	0.72	0.521704
				11482	18,724,794 – 18,724,887	+	6	106	77.28	-2.65	0.60	0.984934
				11483	18,724,794 – 18,724,887	-	6	106	77.28	-2.30	0.59	0.961982
7100	3R_DroMel_CAF1	18,727,342 – 18,727,435	- - - - - - - - -	11484	18,727,342 – 18,727,435	-	6	93	99.07	-2.78	0.94	0.999741
7101	3R_DroMel_CAF1	18,730,021 – 18,730,120	- - - - - - - - -	11485	18,730,021 – 18,730,120	+	5	103	90.91	-1.48	0.82	0.713851
7102	3R_DroMel_CAF1	18,730,726 – 18,730,824	- - - - - - - - -	11486	18,730,726 – 18,730,824	-	4	100	93.75	-1.71	0.80	0.530997
7103	3R_DroMel_CAF1	18,731,723 – 18,731,872	- - - - - - - - -	11487	18,731,723 – 18,731,813	-	5	114	78.63	-1.78	0.63	0.736804
				11488	18,731,779 – 18,731,872	+	4	107	87.17	-1.81	0.79	0.802253
				11489	18,731,779 – 18,731,872	-	4	107	87.17	-2.63	0.79	0.972541
7104	3R_DroMel_CAF1	18,735,489 – 18,735,584	- - - - - - - - -	11490	18,735,489 – 18,735,584	-	6	110	82.63	-2.76	0.58	0.729766
7105	3R_DroMel_CAF1	18,737,648 – 18,737,742	- - - - - - - - -	11491	18,737,648 – 18,737,742	+	6	94	92.41	-2.03	0.85	0.860393
7106	3R_DroMel_CAF1	18,738,163 – 18,738,259	- - - - - - - - -	11492	18,738,163 – 18,738,259	-	6	104	82.21	-1.89	0.60	0.500000
7107	3R_DroMel_CAF1	18,741,706 – 18,741,797	- - - - - - - - -	11493	18,741,706 – 18,741,797	-	6	101	70.05	-1.73	0.51	0.850767
7108	3R_DroMel_CAF1	18,743,874 – 18,743,984	- - - - - - - - -	11494	18,743,874 – 18,743,984	+	6	120	76.68	-2.42	0.43	0.895307
7108	3R_DroMel_CAF1	18,743,874 – 18,743,984	- - - - - - - - -	11495	18,743,874 – 18,743,984	-	6	120	76.68	-2.69	0.40	0.939977
7109	3R_DroMel_CAF1	18,745,403 – 18,745,503	- - - - - - - - -	11496	18,745,403 – 18,745,503	+	4	109	90.83	-1.45	0.80	0.522523
7109	3R_DroMel_CAF1	18,745,403 – 18,745,503	- - - - - - - - -	11497	18,745,403 – 18,745,503	-	4	109	90.83	-1.66	0.78	0.626812
7110	3R_DroMel_CAF1	18,746,636 – 18,746,832	- - - - - - - - -	11498	18,746,636 – 18,746,752	-	4	119	83.68	-2.21	0.67	0.883944
7110	3R_DroMel_CAF1	18,746,636 – 18,746,832	- - - - - - - - -	11499	18,746,713 – 18,746,832	+	4	120	89.54	-1.57	0.75	0.589176
7111	3R_DroMel_CAF1	18,747,183 – 18,747,388	- - - - - - - - -	11500	18,747,183 – 18,747,296	-	4	120	94.85	-2.00	0.91	0.916129
				11501	18,747,223 – 18,747,336	+	4	120	85.55	-3.44	0.79	0.995717
				11502	18,747,223 – 18,747,336	-	4	120	85.55	-2.32	0.71	0.909676
				11503	18,747,263 – 18,747,376	+	4	113	88.44	-2.16	0.72	0.805779
				11504	18,747,263 – 18,747,376	-	4	113	88.44	-2.47	0.85	0.976996
				11505	18,747,296 – 18,747,388	-	4	92	85.71	-3.66	0.64	0.960069
7112	3R_DroMel_CAF1	18,747,956 – 18,748,063	- - - - - - - - -	11506	18,747,956 – 18,748,063	-	5	120	88.50	-1.43	0.80	0.552762
7113	3R_DroMel_CAF1	18,748,440 – 18,748,620	- - - - - - - - -	11507	18,748,440 – 18,748,553	+	5	115	98.24	-2.33	0.98	0.999437
				11508	18,748,440 – 18,748,553	-	5	115	98.24	-2.42	0.94	0.999080
				11509	18,748,475 – 18,748,587	+	4	118	90.54	-2.63	0.92	0.994117
				11510	18,748,475 – 18,748,587	-	4	118	90.54	-2.23	0.85	0.951100
				11511	18,748,513 – 18,748,620	-	4	119	82.63	-1.89	0.74	0.831827
7114	3R_DroMel_CAF1	18,750,469 – 18,750,559	- - - - - - - - -	11512	18,750,469 – 18,750,559	-	6	104	83.52	-1.58	0.75	0.546900
7115	3R_DroMel_CAF1	18,751,902 – 18,752,002	- - - - - - - - -	11513	18,751,902 – 18,752,002	+	4	100	87.67	-1.40	0.73	0.510509
7116	3R_DroMel_CAF1	18,753,280 – 18,753,394	- - - - - - - - -	11514	18,753,280 – 18,753,394	+	5	114	94.59	-1.08	0.94	0.598753
7117	3R_DroMel_CAF1	18,754,724 – 18,754,824	- - - - - - - - -	11515	18,754,724 – 18,754,824	+	5	120	72.54	-1.92	0.15	0.906750
7117	3R_DroMel_CAF1	18,754,724 – 18,754,824	- - - - - - - - -	11516	18,754,724 – 18,754,824	-	5	120	72.54	-2.06	0.22	0.948646
7118	3R_DroMel_CAF1	18,756,057 – 18,756,147	- - - - - - - - -	11517	18,756,057 – 18,756,147	-	6	107	84.12	-1.89	0.71	0.517667
7119	3R_DroMel_CAF1	18,759,891 – 18,759,983	- - - - - - - - -	11518	18,759,891 – 18,759,983	-	5	101	78.12	-1.95	0.48	0.660480
7120	3R_DroMel_CAF1	18,764,854 – 18,764,954	- - - - - - - - -	11519	18,764,854 – 18,764,954	+	5	107	81.37	-1.58	0.71	0.583932
7120	3R_DroMel_CAF1	18,764,854 – 18,764,954	- - - - - - - - -	11520	18,764,854 – 18,764,954	-	5	107	81.37	-1.91	0.71	0.833511
7121	3R_DroMel_CAF1	18,765,100 – 18,765,191	- - - - - - - - -	11521	18,765,100 – 18,765,191	-	6	118	74.53	-1.53	0.65	0.897296
7122	3R_DroMel_CAF1	18,765,775 – 18,765,887	- - - - - - - - -	11522	18,765,775 – 18,765,887	+	5	119	78.07	-1.89	0.56	0.740365
7123	3R_DroMel_CAF1	18,766,469 – 18,766,571	- - - - - - - - -	11523	18,766,469 – 18,766,571	+	3	108	78.16	-2.08	0.60	0.814281
7123	3R_DroMel_CAF1	18,766,469 – 18,766,571	- - - - - - - - -	11524	18,766,469 – 18,766,571	-	3	108	78.16	-1.72	0.66	0.757364
7124	3R_DroMel_CAF1	18,768,622 – 18,768,721	- - - - - - - - -	11525	18,768,622 – 18,768,721	-	6	116	90.11	-1.82	0.83	0.605683
7125	3R_DroMel_CAF1	18,769,281 – 18,769,372	- - - - - - - - -	11526	18,769,281 – 18,769,372	-	6	101	84.69	-2.63	0.69	0.609739
7126	3R_DroMel_CAF1	18,770,103 – 18,770,193	- - - - - - - - -	11527	18,770,103 – 18,770,193	+	5	113	81.90	-2.63	0.50	0.880409
7126	3R_DroMel_CAF1	18,770,103 – 18,770,193	- - - - - - - - -	11528	18,770,103 – 18,770,193	-	5	113	81.90	-2.46	0.45	0.731210
7127	3R_DroMel_CAF1	18,770,334 – 18,770,435	- - - - - - - - -	11529	18,770,334 – 18,770,435	-	5	114	82.02	-2.38	0.69	0.950210
7128	3R_DroMel_CAF1	18,770,719 – 18,770,829	- - - - - - - - -	11530	18,770,719 – 18,770,829	-	5	116	83.00	-1.82	0.62	0.539402
7129	3R_DroMel_CAF1	18,770,872 – 18,770,980	- - - - - - - - -	11531	18,770,872 – 18,770,980	-	5	110	81.69	-2.21	0.44	0.523979
7130	3R_DroMel_CAF1	18,776,843 – 18,776,945	- - - - - - - - -	11532	18,776,843 – 18,776,945	+	5	109	74.67	-2.35	0.38	0.984402
7130	3R_DroMel_CAF1	18,776,843 – 18,776,945	- - - - - - - - -	11533	18,776,843 – 18,776,945	-	5	109	74.67	-1.84	0.35	0.718321
7131	3R_DroMel_CAF1	18,777,593 – 18,777,701	- - - - - - - - -	11534	18,777,593 – 18,777,701	+	6	108	92.65	-2.27	0.89	0.991114
7132	3R_DroMel_CAF1	18,778,996 – 18,779,130	- - - - - - - - -	11535	18,778,996 – 18,779,091	+	5	95	75.64	-0.45	0.97	0.952959
7132	3R_DroMel_CAF1	18,778,996 – 18,779,130	- - - - - - - - -	11536	18,779,022 – 18,779,130	-	6	109	73.84	-1.89	0.53	0.891877
7133	3R_DroMel_CAF1	18,781,283 – 18,781,418	- - - - - - - - -	11537	18,781,283 – 18,781,381	+	6	108	90.95	-3.58	0.89	0.999136
				11538	18,781,283 – 18,781,381	-	6	108	90.95	-4.77	0.90	0.999766
				11539	18,781,307 – 18,781,418	+	6	113	95.28	-2.76	0.86	0.989891
				11540	18,781,307 – 18,781,418	-	6	113	95.28	-4.45	0.83	0.998931
7134	3R_DroMel_CAF1	18,791,563 – 18,791,687	- - - - - - - - -	11541	18,791,563 – 18,791,653	-	6	94	82.22	-1.47	0.67	0.500000
7134	3R_DroMel_CAF1	18,791,563 – 18,791,687	- - - - - - - - -	11542	18,791,592 – 18,791,687	+	6	109	79.33	-1.68	0.57	0.549731
7135	3R_DroMel_CAF1	18,803,389 – 18,803,527	- - - "knownCDS=Parent=FBtr0084340;Name=CG17244-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17244-RA" - - - - -	11543	18,803,389 – 18,803,500	-	6	116	80.07	-1.39	0.65	0.563353
				11544	18,803,423 – 18,803,527	+	6	114	79.91	-2.09	0.62	0.851936
				11545	18,803,423 – 18,803,527	-	6	114	79.91	-1.76	0.72	0.853377
7136	3R_DroMel_CAF1	18,805,794 – 18,805,902	- - - - - - - - -	11546	18,805,794 – 18,805,902	+	6	119	81.25	-2.59	0.63	0.882481
7137	3R_DroMel_CAF1	18,806,480 – 18,806,583	- - - - - - - - -	11547	18,806,480 – 18,806,572	+	6	98	79.53	-2.30	0.63	0.923069
				11548	18,806,480 – 18,806,572	-	6	98	79.53	-1.85	0.62	0.786521
				11549	18,806,493 – 18,806,583	+	6	90	83.05	-2.50	0.78	0.870576
				11550	18,806,493 – 18,806,583	-	6	90	83.05	-1.63	0.74	0.600765
7138	3R_DroMel_CAF1	18,811,055 – 18,811,148	- - - - - - - - -	11551	18,811,055 – 18,811,148	-	6	104	79.25	-1.73	0.59	0.659299
7139	3R_DroMel_CAF1	18,812,988 – 18,813,088	- - - "knownCDS=Parent=FBtr0084341;Name=Or94a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17241-RA" - - - - -	11552	18,812,988 – 18,813,088	+	6	106	81.28	-1.67	0.69	0.699165
7140	3R_DroMel_CAF1	18,814,802 – 18,814,937	- - - - - - - - -	11553	18,814,802 – 18,814,898	-	6	104	71.14	-1.50	0.61	0.876787
7140	3R_DroMel_CAF1	18,814,802 – 18,814,937	- - - - - - - - -	11554	18,814,826 – 18,814,937	-	6	115	70.98	-1.53	0.50	0.560455
7141	3R_DroMel_CAF1	18,820,532 – 18,820,635	- - - - - - - - -	11555	18,820,532 – 18,820,635	+	5	109	75.49	-1.99	0.42	0.836757
7141	3R_DroMel_CAF1	18,820,532 – 18,820,635	- - - - - - - - -	11556	18,820,532 – 18,820,635	-	5	109	75.49	-2.15	0.38	0.936897
7142	3R_DroMel_CAF1	18,822,962 – 18,823,104	- - - - - - - - -	11557	18,822,962 – 18,823,052	+	5	105	91.10	-2.18	0.73	0.732063
				11558	18,822,962 – 18,823,052	-	5	105	91.10	-1.94	0.79	0.905840
				11559	18,823,013 – 18,823,104	-	6	114	78.11	-2.10	0.46	0.608712
7143	3R_DroMel_CAF1	18,830,034 – 18,830,131	- - - - - - - - -	11560	18,830,034 – 18,830,131	+	5	97	87.73	-2.29	0.70	0.797392
7144	3R_DroMel_CAF1	18,830,484 – 18,830,578	- - - - - - - - -	11561	18,830,484 – 18,830,578	+	6	110	82.33	-1.91	0.69	0.700865
7145	3R_DroMel_CAF1	18,832,879 – 18,832,970	- - - - - - - - -	11562	18,832,879 – 18,832,970	+	6	91	89.38	-1.95	0.86	0.867102
7146	3R_DroMel_CAF1	18,836,975 – 18,837,075	- - - - - - - - -	11563	18,836,975 – 18,837,075	-	6	109	82.16	-3.34	0.54	0.878928
7147	3R_DroMel_CAF1	18,837,273 – 18,837,386	- - - - - - - - -	11564	18,837,273 – 18,837,386	-	5	113	87.39	-1.72	0.90	0.924917
7148	3R_DroMel_CAF1	18,838,609 – 18,838,706	- - - - - - - - -	11565	18,838,609 – 18,838,706	+	3	114	84.62	-2.41	0.65	0.710244
7149	3R_DroMel_CAF1	18,841,055 – 18,841,148	- - - - - - - - -	11566	18,841,055 – 18,841,148	-	6	98	79.86	-2.02	0.53	0.609795
7150	3R_DroMel_CAF1	18,842,243 – 18,842,374	- - - - - - - - -	11567	18,842,243 – 18,842,340	+	4	98	84.02	-1.96	0.87	0.923376
7150	3R_DroMel_CAF1	18,842,243 – 18,842,374	- - - - - - - - -	11568	18,842,270 – 18,842,374	+	5	105	81.96	-1.89	0.85	0.897658
7151	3R_DroMel_CAF1	18,843,905 – 18,844,060	- - - - - - - - -	11569	18,843,905 – 18,843,995	-	6	109	82.15	-1.72	0.68	0.638059
7151	3R_DroMel_CAF1	18,843,905 – 18,844,060	- - - - - - - - -	11570	18,843,957 – 18,844,060	-	6	103	89.13	-2.09	0.80	0.557696
7152	3R_DroMel_CAF1	18,847,743 – 18,847,836	- - - - - - - - -	11571	18,847,743 – 18,847,836	+	6	106	84.04	-1.48	0.84	0.570962
7152	3R_DroMel_CAF1	18,847,743 – 18,847,836	- - - - - - - - -	11572	18,847,743 – 18,847,836	-	6	106	84.04	-1.66	0.86	0.722757
7153	3R_DroMel_CAF1	18,848,999 – 18,849,101	- - - - - - - - -	11573	18,848,999 – 18,849,101	+	4	107	83.89	-1.66	0.70	0.646648
7154	3R_DroMel_CAF1	18,849,563 – 18,849,669	- - - "knownCDS=Parent=FBtr0084363, FBtr0084364;Name=lmd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4677-RA, FlyBase+Annotation+IDs:CG4677-RB" - - - - -	11574	18,849,563 – 18,849,669	-	6	115	82.10	-1.32	0.72	0.522960
7155	3R_DroMel_CAF1	18,857,556 – 18,857,674	- - - - - - - - -	11575	18,857,556 – 18,857,674	-	6	118	83.16	-1.73	0.71	0.588064
7156	3R_DroMel_CAF1	18,865,177 – 18,865,268	- - - - - - - - -	11576	18,865,177 – 18,865,268	+	4	104	80.92	-1.90	0.67	0.789497
7157	3R_DroMel_CAF1	18,867,026 – 18,867,201	- - - - - - - - -	11577	18,867,026 – 18,867,134	+	5	112	82.11	-2.15	0.55	0.671737
7157	3R_DroMel_CAF1	18,867,026 – 18,867,201	- - - - - - - - -	11578	18,867,099 – 18,867,201	+	4	107	82.70	-1.84	0.65	0.683621
7158	3R_DroMel_CAF1	18,871,660 – 18,871,751	- - - - - - - - -	11579	18,871,660 – 18,871,751	+	6	98	79.72	-1.88	0.55	0.594453
7159	3R_DroMel_CAF1	18,872,689 – 18,872,808	- - - - - - - - -	11580	18,872,689 – 18,872,808	-	3	120	92.20	-2.14	0.86	0.735609
7160	3R_DroMel_CAF1	18,873,315 – 18,873,456	- - - - - - - - -	11581	18,873,315 – 18,873,417	+	3	120	73.98	-1.23	0.86	0.969662
				11582	18,873,315 – 18,873,417	-	3	120	73.98	-2.52	0.90	0.999934
				11583	18,873,337 – 18,873,456	-	3	120	92.20	-2.93	0.86	0.932362
7161	3R_DroMel_CAF1	18,874,139 – 18,874,241	- - - - - - - - -	11584	18,874,139 – 18,874,241	-	5	108	79.37	-1.60	0.76	0.768607
7162	3R_DroMel_CAF1	18,878,336 – 18,878,455	- - - "knownCDS=Parent=FBtr0084346;Name=Gr94a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31280-RA" - - - - -	11585	18,878,336 – 18,878,455	-	6	120	80.67	-1.68	0.63	0.650368
7163	3R_DroMel_CAF1	18,879,959 – 18,880,070	- - - - - - - - -	11586	18,879,959 – 18,880,070	-	5	120	77.29	-1.92	0.42	0.641500
7164	3R_DroMel_CAF1	18,880,981 – 18,881,087	- - - - - - - - -	11587	18,880,981 – 18,881,087	-	3	111	81.82	-2.69	0.70	0.970655
7165	3R_DroMel_CAF1	18,883,889 – 18,883,991	- - - - - - - - -	11588	18,883,889 – 18,883,991	+	5	120	72.71	-1.53	0.68	0.882073
7166	3R_DroMel_CAF1	18,886,186 – 18,886,306	- - - "knownCDS=Parent=FBtr0084356;Name=sav-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33193-RA" - - - - -	11589	18,886,186 – 18,886,306	+	5	120	93.33	-1.73	0.86	0.954051
7167	3R_DroMel_CAF1	18,886,622 – 18,886,939	- - - "knownCDS=Parent=FBtr0084356;Name=sav-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33193-RA" - - - - -	11590	18,886,622 – 18,886,742	+	5	120	94.42	-1.36	0.93	0.917636
				11591	18,886,702 – 18,886,819	+	5	120	94.08	-1.22	0.87	0.595362
				11592	18,886,742 – 18,886,859	+	5	120	96.08	-3.52	1.00	0.999992
				11593	18,886,779 – 18,886,899	+	5	120	99.67	-2.80	1.00	0.999585
				11594	18,886,819 – 18,886,939	+	5	120	99.33	-1.38	0.98	0.779722
7168	3R_DroMel_CAF1	18,890,841 – 18,890,941	- - - - - - - - -	11595	18,890,841 – 18,890,941	-	6	110	72.87	-2.63	0.46	0.993169
7169	3R_DroMel_CAF1	18,898,893 – 18,898,984	- - - "knownCDS=Parent=FBtr0084354;Name=CG13830-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13830-RA" - - - - -	11596	18,898,893 – 18,898,984	+	5	91	87.42	-2.69	0.67	0.833942
7170	3R_DroMel_CAF1	18,901,294 – 18,901,406	- - - - - - - - -	11597	18,901,294 – 18,901,406	-	4	112	83.99	-1.45	0.77	0.531784
7171	3R_DroMel_CAF1	18,905,160 – 18,905,253	- - - - - - - - -	11598	18,905,160 – 18,905,253	+	5	101	81.90	-2.44	0.53	0.830439
7172	3R_DroMel_CAF1	18,906,543 – 18,906,638	- - - - - - - - -	11599	18,906,543 – 18,906,638	+	6	110	79.02	-1.45	0.79	0.842068
7173	3R_DroMel_CAF1	18,910,052 – 18,910,142	- - - - - - - - -	11600	18,910,052 – 18,910,142	-	6	111	80.31	-2.71	0.67	0.944829
7174	3R_DroMel_CAF1	18,910,319 – 18,910,418	- - - - - - - - -	11601	18,910,319 – 18,910,418	+	6	118	77.19	-1.59	0.57	0.586059
7174	3R_DroMel_CAF1	18,910,319 – 18,910,418	- - - - - - - - -	11602	18,910,319 – 18,910,418	-	6	118	77.19	-1.73	0.60	0.819467
7175	3R_DroMel_CAF1	18,912,899 – 18,912,997	- - - - - - - - -	11603	18,912,899 – 18,912,997	+	6	98	81.83	-2.06	0.59	0.600818
7176	3R_DroMel_CAF1	18,914,286 – 18,914,377	- - - - - - - - -	11604	18,914,286 – 18,914,377	+	6	101	76.58	-3.22	0.38	0.986270
7176	3R_DroMel_CAF1	18,914,286 – 18,914,377	- - - - - - - - -	11605	18,914,286 – 18,914,377	-	6	101	76.58	-2.15	0.39	0.544128
7177	3R_DroMel_CAF1	18,915,153 – 18,915,251	- - - - - - - - -	11606	18,915,153 – 18,915,251	-	6	104	82.85	-1.38	0.76	0.520894
7178	3R_DroMel_CAF1	18,922,933 – 18,923,081	- - - - - - - - -	11607	18,922,933 – 18,923,041	-	6	118	72.70	-1.82	0.40	0.511712
				11608	18,922,965 – 18,923,081	+	6	119	75.33	-2.15	0.38	0.628913
				11609	18,922,965 – 18,923,081	-	6	119	75.33	-2.13	0.45	0.831144
7179	3R_DroMel_CAF1	18,925,108 – 18,925,243	- - - - - - - - -	11610	18,925,108 – 18,925,225	+	4	117	86.32	-2.61	0.66	0.886304
				11611	18,925,108 – 18,925,225	-	4	117	86.32	-2.00	0.71	0.803801
				11612	18,925,148 – 18,925,243	-	4	95	88.95	-2.08	0.77	0.859436
7180	3R_DroMel_CAF1	18,928,876 – 18,929,007	- - - - - - - - -	11613	18,928,876 – 18,928,990	+	5	114	84.64	-2.90	0.64	0.943297
				11614	18,928,876 – 18,928,990	-	5	114	84.64	-1.85	0.65	0.584927
				11615	18,928,911 – 18,929,007	+	6	97	79.75	-2.17	0.68	0.918272
7181	3R_DroMel_CAF1	18,929,720 – 18,929,832	- - - - - - - - -	11616	18,929,720 – 18,929,832	+	5	112	84.82	-1.94	0.62	0.525615
7182	3R_DroMel_CAF1	18,943,938 – 18,944,041	- - - - - - - - -	11617	18,943,938 – 18,944,041	+	5	103	68.22	-1.80	0.34	0.588629
7183	3R_DroMel_CAF1	18,951,450 – 18,951,570	- - - "knownCDS=Parent=FBtr0084406;Name=CG31365-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31365-RA" - - - - -	11618	18,951,450 – 18,951,570	+	5	120	92.42	-1.37	0.85	0.729534
7184	3R_DroMel_CAF1	18,954,596 – 18,954,716	- - - "knownCDS=Parent=FBtr0100506;Name=hh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4637-RB" - - - - -	11619	18,954,596 – 18,954,716	-	5	120	94.25	-1.17	0.88	0.541412
7185	3R_DroMel_CAF1	18,955,327 – 18,955,471	- - - - - - - - -	11620	18,955,327 – 18,955,440	+	6	120	94.34	-1.25	0.91	0.796534
7185	3R_DroMel_CAF1	18,955,327 – 18,955,471	- - - - - - - - -	11621	18,955,366 – 18,955,471	+	6	120	92.67	-1.84	0.87	0.894263
7186	3R_DroMel_CAF1	18,955,764 – 18,956,005	- - - - - - - - -	11622	18,955,764 – 18,955,867	-	5	104	98.64	-1.50	0.96	0.904781
				11623	18,955,803 – 18,955,906	-	5	105	98.06	-1.54	1.02	0.975560
				11624	18,955,906 – 18,956,005	+	6	120	77.58	-2.06	0.46	0.612589
7187	3R_DroMel_CAF1	18,957,325 – 18,957,472	- - - - - - - - -	11625	18,957,325 – 18,957,432	+	5	107	98.88	-2.65	0.94	0.999213
				11626	18,957,325 – 18,957,432	-	5	107	98.88	-1.90	0.97	0.991313
				11627	18,957,365 – 18,957,472	-	5	107	99.63	-1.44	0.98	0.822788
7188	3R_DroMel_CAF1	18,957,610 – 18,957,787	- - - - - - - - -	11628	18,957,610 – 18,957,728	+	3	118	91.20	-1.23	0.99	0.644399
				11629	18,957,610 – 18,957,728	-	3	118	91.20	-1.28	0.99	0.661365
				11630	18,957,648 – 18,957,757	+	5	120	86.42	-2.11	0.70	0.776931
				11631	18,957,648 – 18,957,757	-	5	120	86.42	-2.06	0.65	0.578192
				11632	18,957,688 – 18,957,787	+	5	99	99.19	-1.70	0.96	0.958496
				11633	18,957,688 – 18,957,787	-	5	99	99.19	-1.63	0.95	0.931444
7189	3R_DroMel_CAF1	18,958,352 – 18,958,456	- - - - - - - - -	11634	18,958,352 – 18,958,456	+	6	120	93.54	-1.34	1.00	0.992110
7190	3R_DroMel_CAF1	18,959,397 – 18,959,525	- - - - - - - - -	11635	18,959,397 – 18,959,494	-	5	97	98.56	-2.25	1.00	0.999289
7190	3R_DroMel_CAF1	18,959,397 – 18,959,525	- - - - - - - - -	11636	18,959,435 – 18,959,525	-	5	99	90.13	-1.37	0.96	0.889636
7191	3R_DroMel_CAF1	18,960,168 – 18,960,261	- - - - - - - - -	11637	18,960,168 – 18,960,261	+	5	93	98.71	-1.57	0.93	0.890613
7192	3R_DroMel_CAF1	18,960,364 – 18,960,532	- - - - - - - - -	11638	18,960,364 – 18,960,470	+	5	119	87.13	-1.87	0.74	0.731840
				11639	18,960,404 – 18,960,510	+	5	119	82.77	-2.87	0.58	0.952735
				11640	18,960,441 – 18,960,532	+	3	98	89.47	-4.15	0.77	0.925041
				11641	18,960,441 – 18,960,532	-	3	98	89.47	-2.26	0.77	0.626752
7193	3R_DroMel_CAF1	18,960,555 – 18,960,675	- - - - - - - - -	11642	18,960,555 – 18,960,675	-	6	120	97.83	-1.94	0.98	0.999561
7194	3R_DroMel_CAF1	18,962,633 – 18,962,723	- - - - - - - - -	11643	18,962,633 – 18,962,723	+	4	118	78.85	-3.01	0.68	0.998970
7194	3R_DroMel_CAF1	18,962,633 – 18,962,723	- - - - - - - - -	11644	18,962,633 – 18,962,723	-	4	118	78.85	-1.72	0.72	0.767507
7195	3R_DroMel_CAF1	18,963,645 – 18,963,761	- - - - - - - - -	11645	18,963,645 – 18,963,761	+	6	120	98.30	-1.01	0.92	0.588859
7196	3R_DroMel_CAF1	18,963,772 – 18,963,864	- - - - - - - - -	11646	18,963,772 – 18,963,864	-	4	92	92.05	-1.42	0.85	0.545699
7197	3R_DroMel_CAF1	18,964,824 – 18,964,926	- - - - - - - - -	11647	18,964,824 – 18,964,926	-	6	120	81.47	-2.00	0.56	0.523836
7198	3R_DroMel_CAF1	18,965,198 – 18,965,318	- - - - - - - - -	11648	18,965,198 – 18,965,318	+	6	120	78.70	-1.46	0.67	0.750127
7199	3R_DroMel_CAF1	18,965,456 – 18,965,557	- - - - - - - - -	11649	18,965,456 – 18,965,557	+	6	120	69.40	-1.60	0.46	0.607025
7200	3R_DroMel_CAF1	18,966,026 – 18,966,159	- - - - - - - - -	11650	18,966,026 – 18,966,120	+	5	103	85.36	-2.61	0.66	0.890281
7200	3R_DroMel_CAF1	18,966,026 – 18,966,159	- - - - - - - - -	11651	18,966,062 – 18,966,159	+	5	102	91.67	-1.45	0.82	0.704697
7201	3R_DroMel_CAF1	18,967,014 – 18,967,129	- - - "knownCDS=Parent=FBtr0100506;Name=hh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4637-RB" - - - - -	11652	18,967,014 – 18,967,129	-	6	120	84.38	-2.50	0.67	0.567370
7202	3R_DroMel_CAF1	18,967,915 – 18,968,008	- - - - - - - - -	11653	18,967,915 – 18,968,008	-	5	107	83.33	-2.11	0.57	0.590490
7203	3R_DroMel_CAF1	18,968,626 – 18,968,737	- - - - - - - - -	11654	18,968,626 – 18,968,737	-	5	113	90.61	-1.94	0.82	0.951647
7204	3R_DroMel_CAF1	18,969,555 – 18,969,656	- - - - - - - - -	11655	18,969,555 – 18,969,656	+	3	114	87.84	-2.20	0.82	0.775337
7204	3R_DroMel_CAF1	18,969,555 – 18,969,656	- - - - - - - - -	11656	18,969,555 – 18,969,656	-	3	114	87.84	-2.28	0.84	0.838207
7205	3R_DroMel_CAF1	18,970,094 – 18,970,210	- - - - - - - - -	11657	18,970,094 – 18,970,210	+	6	120	95.03	-2.95	0.94	0.999928
7205	3R_DroMel_CAF1	18,970,094 – 18,970,210	- - - - - - - - -	11658	18,970,094 – 18,970,210	-	6	120	95.03	-2.22	0.86	0.962164
7206	3R_DroMel_CAF1	18,970,749 – 18,970,904	- - - - - - - - -	11659	18,970,749 – 18,970,864	+	6	120	81.49	-1.86	0.62	0.624718
				11660	18,970,784 – 18,970,904	+	6	120	94.27	-2.28	0.84	0.878552
				11661	18,970,784 – 18,970,904	-	6	120	94.27	-3.16	0.83	0.981512
7207	3R_DroMel_CAF1	18,972,570 – 18,972,669	- - - - - - - - -	11662	18,972,570 – 18,972,669	+	6	120	90.50	-3.07	0.79	0.881882
7208	3R_DroMel_CAF1	18,973,068 – 18,973,166	- - - - - - - - -	11663	18,973,068 – 18,973,166	-	5	99	95.24	-1.49	0.83	0.654011
7209	3R_DroMel_CAF1	18,974,152 – 18,974,375	- - - - - - - - -	11664	18,974,152 – 18,974,264	+	6	120	90.47	-1.38	0.90	0.730224
				11665	18,974,232 – 18,974,337	+	5	110	88.85	-3.13	0.71	0.949769
				11666	18,974,264 – 18,974,375	+	5	117	88.42	-2.11	0.73	0.812159
7210	3R_DroMel_CAF1	18,974,529 – 18,974,743	- - - - - - - - -	11667	18,974,529 – 18,974,643	-	5	115	87.73	-1.44	0.78	0.509529
				11668	18,974,607 – 18,974,723	-	6	120	96.02	-1.03	0.93	0.689018
				11669	18,974,643 – 18,974,743	-	4	101	99.50	-2.23	1.00	0.837362
7211	3R_DroMel_CAF1	18,974,982 – 18,975,093	- - - - - - - - -	11670	18,974,982 – 18,975,093	+	6	120	79.09	-1.82	0.64	0.831350
7212	3R_DroMel_CAF1	18,976,035 – 18,976,162	- - - - - - - - -	11671	18,976,035 – 18,976,128	-	5	95	91.47	-2.98	0.82	0.998524
7212	3R_DroMel_CAF1	18,976,035 – 18,976,162	- - - - - - - - -	11672	18,976,054 – 18,976,162	-	5	112	90.51	-2.05	0.84	0.979605
7213	3R_DroMel_CAF1	18,976,764 – 18,976,884	- - - - - - - - -	11673	18,976,764 – 18,976,884	+	5	120	97.33	-1.22	0.95	0.726130
7214	3R_DroMel_CAF1	18,979,541 – 18,979,664	- - - - - - - - -	11674	18,979,541 – 18,979,657	+	6	120	83.61	-2.07	0.82	0.817083
7214	3R_DroMel_CAF1	18,979,541 – 18,979,664	- - - - - - - - -	11675	18,979,548 – 18,979,664	+	6	120	81.57	-2.50	0.80	0.928180
7215	3R_DroMel_CAF1	18,988,169 – 18,988,278	- - - - - - - - -	11676	18,988,169 – 18,988,278	-	6	118	75.49	-1.54	0.57	0.643740
7216	3R_DroMel_CAF1	18,993,276 – 18,993,409	- - - - - - - - -	11677	18,993,276 – 18,993,369	+	5	104	86.15	-2.21	0.85	0.978732
				11678	18,993,276 – 18,993,369	-	5	104	86.15	-3.01	0.81	0.997377
				11679	18,993,302 – 18,993,409	+	5	110	79.67	-2.19	0.74	0.965838
				11680	18,993,302 – 18,993,409	-	5	110	79.67	-2.43	0.66	0.977406
7217	3R_DroMel_CAF1	18,993,995 – 18,994,103	- - - - - - - - -	11681	18,993,995 – 18,994,103	+	5	109	78.39	-2.05	0.56	0.847249
7218	3R_DroMel_CAF1	18,996,944 – 18,997,052	- - - - - - - - -	11682	18,996,944 – 18,997,052	+	6	116	78.37	-1.86	0.52	0.585818
7219	3R_DroMel_CAF1	19,001,458 – 19,001,566	- - - - - - - - -	11683	19,001,458 – 19,001,566	+	6	111	85.57	-2.31	0.83	0.854859
7220	3R_DroMel_CAF1	19,020,301 – 19,020,407	- - - - - - - - -	11684	19,020,301 – 19,020,407	-	6	106	93.21	-2.13	0.87	0.963924
7221	3R_DroMel_CAF1	19,020,811 – 19,020,902	- - - - - - - - -	11685	19,020,811 – 19,020,902	+	6	96	87.28	-2.49	0.97	0.998603
7222	3R_DroMel_CAF1	19,023,989 – 19,024,087	- - - - - - - - -	11686	19,023,989 – 19,024,087	+	6	109	71.78	-2.40	0.26	0.813792
7223	3R_DroMel_CAF1	19,026,099 – 19,026,295	- - - - - - - - -	11687	19,026,099 – 19,026,189	+	6	90	92.59	-2.63	0.79	0.633224
				11688	19,026,099 – 19,026,189	-	6	90	92.59	-1.57	0.88	0.789551
				11689	19,026,189 – 19,026,295	-	6	115	81.66	-1.95	0.57	0.500000
7224	3R_DroMel_CAF1	19,031,565 – 19,031,664	- - - - - - - - -	11690	19,031,565 – 19,031,664	-	5	106	92.93	-1.94	0.77	0.804156
7225	3R_DroMel_CAF1	19,033,976 – 19,034,069	- - - - - - - - -	11691	19,033,976 – 19,034,069	+	6	108	76.19	-2.64	0.45	0.971285
7225	3R_DroMel_CAF1	19,033,976 – 19,034,069	- - - - - - - - -	11692	19,033,976 – 19,034,069	-	6	108	76.19	-2.36	0.42	0.878162
7226	3R_DroMel_CAF1	19,040,909 – 19,041,033	- - - - - - - - -	11693	19,040,909 – 19,041,008	-	5	104	89.17	-1.63	0.91	0.938598
7226	3R_DroMel_CAF1	19,040,909 – 19,041,033	- - - - - - - - -	11694	19,040,934 – 19,041,033	+	5	118	78.12	-2.02	0.45	0.718740
7227	3R_DroMel_CAF1	19,041,203 – 19,041,299	- - - - - - - - -	11695	19,041,203 – 19,041,299	-	6	117	80.90	-2.63	0.45	0.597708
7228	3R_DroMel_CAF1	19,041,444 – 19,041,610	- - - - - - - - -	11696	19,041,444 – 19,041,548	+	5	120	82.58	-2.08	0.64	0.780167
				11697	19,041,444 – 19,041,548	-	5	120	82.58	-1.62	0.74	0.616878
				11698	19,041,470 – 19,041,577	+	5	115	84.40	-3.19	0.69	0.987070
				11699	19,041,470 – 19,041,577	-	5	115	84.40	-4.34	0.67	0.996840
				11700	19,041,508 – 19,041,610	+	5	115	79.42	-2.61	0.50	0.971638
				11701	19,041,508 – 19,041,610	-	5	115	79.42	-2.85	0.52	0.990453
7229	3R_DroMel_CAF1	19,044,175 – 19,044,307	- - - "knownCDS=Parent=FBtr0084392;Name=cnc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17894-RC" - - - - -	11702	19,044,175 – 19,044,267	+	6	105	66.55	-1.47	0.55	0.809469
				11703	19,044,175 – 19,044,267	-	6	105	66.55	-1.53	0.44	0.583477
				11704	19,044,201 – 19,044,307	+	6	115	75.09	-1.80	0.59	0.901611
7230	3R_DroMel_CAF1	19,047,259 – 19,047,360	- - - - - - - - -	11705	19,047,259 – 19,047,360	+	6	105	79.99	-1.15	0.69	0.500000
7231	3R_DroMel_CAF1	19,048,002 – 19,048,141	- - - - - - - - -	11706	19,048,002 – 19,048,103	+	5	114	74.37	-1.69	0.51	0.533890
				11707	19,048,002 – 19,048,103	-	5	114	74.37	-2.01	0.36	0.890260
				11708	19,048,023 – 19,048,141	+	4	120	82.77	-1.98	0.67	0.811765
				11709	19,048,023 – 19,048,141	-	4	120	82.77	-3.52	0.50	0.867499
7232	3R_DroMel_CAF1	19,049,712 – 19,049,804	- - - - - - - - -	11710	19,049,712 – 19,049,804	+	5	92	76.34	-1.15	-0.00	0.520922
7233	3R_DroMel_CAF1	19,056,451 – 19,056,571	- - - "knownCDS=Parent=FBtr0084390;Name=CG4467-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4467-RA" - - - - -	11711	19,056,451 – 19,056,571	-	6	120	85.78	-2.23	0.75	0.569160
7234	3R_DroMel_CAF1	19,068,454 – 19,068,545	- - - - - - - - -	11712	19,068,454 – 19,068,545	+	6	103	76.72	-3.24	0.64	0.994314
7234	3R_DroMel_CAF1	19,068,454 – 19,068,545	- - - - - - - - -	11713	19,068,454 – 19,068,545	-	6	103	76.72	-3.01	0.49	0.991922
7235	3R_DroMel_CAF1	19,071,996 – 19,072,098	- - - - - - - - -	11714	19,071,996 – 19,072,098	-	6	102	82.57	-2.31	0.76	0.846900
7236	3R_DroMel_CAF1	19,072,211 – 19,072,314	- - - - - - - - -	11715	19,072,211 – 19,072,314	-	5	103	81.36	-1.74	0.84	0.828518
7237	3R_DroMel_CAF1	19,074,683 – 19,074,782	- - - - - - - - -	11716	19,074,683 – 19,074,782	-	6	101	83.16	-2.36	0.69	0.732480
7238	3R_DroMel_CAF1	19,076,766 – 19,076,862	- - - - - - - - -	11717	19,076,766 – 19,076,862	+	6	101	72.38	-1.41	0.59	0.716216
7239	3R_DroMel_CAF1	19,077,222 – 19,077,313	- - - - - - - - -	11718	19,077,222 – 19,077,313	+	5	92	94.22	-1.59	0.85	0.885076
7239	3R_DroMel_CAF1	19,077,222 – 19,077,313	- - - - - - - - -	11719	19,077,222 – 19,077,313	-	5	92	94.22	-1.77	0.83	0.924314
7240	3R_DroMel_CAF1	19,081,917 – 19,082,037	- - - "knownCDS=Parent=FBtr0084387;Name=CG4448-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4448-RA" - - - - -	11720	19,081,917 – 19,082,037	-	6	120	79.78	-1.80	0.58	0.648761
7241	3R_DroMel_CAF1	19,087,335 – 19,087,453	- - - - - - - - -	11721	19,087,335 – 19,087,453	-	5	119	90.03	-2.98	0.66	0.684192
7242	3R_DroMel_CAF1	19,090,940 – 19,091,033	- - - - - - - - -	11722	19,090,940 – 19,091,033	-	6	117	76.11	-1.76	0.66	0.933657
7243	3R_DroMel_CAF1	19,091,592 – 19,091,685	- - - "knownCDS=Parent=FBtr0100227, FBtr0100228;Name=orb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10868-RD, FlyBase+Annotation+IDs:CG10868-RE" - - - - -	11723	19,091,592 – 19,091,685	+	6	93	70.97	-1.46	0.73	0.966381
7243	3R_DroMel_CAF1	19,091,592 – 19,091,685		11724	19,091,592 – 19,091,685	-	6	93	70.97	-1.24	0.61	0.628470
7244	3R_DroMel_CAF1	19,091,871 – 19,091,976	- - - "knownCDS=Parent=FBtr0100227, FBtr0100228;Name=orb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10868-RD, FlyBase+Annotation+IDs:CG10868-RE" - - - - -	11725	19,091,871 – 19,091,976	+	6	110	78.30	-1.81	0.56	0.685621
7244	3R_DroMel_CAF1	19,091,871 – 19,091,976		11726	19,091,871 – 19,091,976	-	6	110	78.30	-1.98	0.68	0.936820
7245	3R_DroMel_CAF1	19,096,858 – 19,096,972	- - - - - - - - -	11727	19,096,858 – 19,096,972	+	6	120	95.69	-2.08	0.88	0.977836
7246	3R_DroMel_CAF1	19,097,841 – 19,097,933	- - - - - - - - -	11728	19,097,841 – 19,097,933	+	6	110	75.66	-2.08	0.61	0.965726
7247	3R_DroMel_CAF1	19,099,421 – 19,099,515	- - - - - - - - -	11729	19,099,421 – 19,099,515	-	6	96	97.54	-0.85	0.99	0.846852
7248	3R_DroMel_CAF1	19,101,638 – 19,101,731	- - - - - - - - -	11730	19,101,638 – 19,101,731	-	6	106	80.54	-1.94	0.54	0.514390
7249	3R_DroMel_CAF1	19,101,755 – 19,101,863	- - - - - - - - -	11731	19,101,755 – 19,101,863	-	5	113	92.09	-1.54	0.79	0.646018
7250	3R_DroMel_CAF1	19,102,730 – 19,102,837	- - - - - - - - -	11732	19,102,730 – 19,102,837	+	3	109	76.09	-1.49	0.64	0.596262
7251	3R_DroMel_CAF1	19,106,883 – 19,106,974	- - - - - - - - -	11733	19,106,883 – 19,106,974	-	6	99	76.35	-1.81	0.54	0.759815
7252	3R_DroMel_CAF1	19,117,510 – 19,117,630	- - - "knownCDS=Parent=FBtr0089715, FBtr0089716, FBtr0089717;Name=pnt-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17077-RC, FlyBase+Annotation+IDs:CG17077-RD, FlyBase+Annotation+IDs:CG17077-RB" - - - - -	11734	19,117,510 – 19,117,630	-	6	120	80.28	-1.63	0.70	0.772733
7253	3R_DroMel_CAF1	19,122,480 – 19,122,580	- - - - - - - - -	11735	19,122,480 – 19,122,580	+	5	100	94.47	-2.15	0.89	0.997696
7254	3R_DroMel_CAF1	19,125,684 – 19,125,786	- - - - - - - - -	11736	19,125,684 – 19,125,786	+	4	102	90.62	-2.10	0.75	0.762699
7254	3R_DroMel_CAF1	19,125,684 – 19,125,786	- - - - - - - - -	11737	19,125,684 – 19,125,786	-	4	102	90.62	-2.77	0.73	0.841158
7255	3R_DroMel_CAF1	19,137,187 – 19,137,309	- - - - - - - - -	11738	19,137,187 – 19,137,295	+	5	117	82.09	-2.13	0.62	0.804110
7255	3R_DroMel_CAF1	19,137,187 – 19,137,309	- - - - - - - - -	11739	19,137,218 – 19,137,309	+	5	94	85.67	-1.61	0.75	0.592708
7256	3R_DroMel_CAF1	19,138,129 – 19,138,259	- - - - - - - - -	11740	19,138,129 – 19,138,221	-	4	117	72.73	-2.45	0.57	0.996214
7256	3R_DroMel_CAF1	19,138,129 – 19,138,259	- - - - - - - - -	11741	19,138,154 – 19,138,259	+	5	120	69.10	-1.78	0.25	0.528616
7257	3R_DroMel_CAF1	19,139,148 – 19,139,266	- - - "knownCDS=Parent=FBtr0089716, FBtr0089717;Name=pnt-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17077-RD, FlyBase+Annotation+IDs:CG17077-RB" - - - - -	11742	19,139,148 – 19,139,266	-	6	119	82.25	-2.13	0.65	0.706220
7258	3R_DroMel_CAF1	19,154,206 – 19,154,306	- - - - - - - - -	11743	19,154,206 – 19,154,306	+	5	120	74.48	-1.79	0.63	0.898859
7259	3R_DroMel_CAF1	19,165,925 – 19,166,015	- - - "knownCDS=Parent=FBtr0089717;Name=pnt-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17077-RB" - - - - -	11744	19,165,925 – 19,166,015	+	5	90	96.00	-2.25	0.98	0.999819
7260	3R_DroMel_CAF1	19,190,176 – 19,190,474	- - - - - - - - -	11745	19,190,176 – 19,190,283	-	5	107	79.15	-1.39	0.72	0.536105
				11746	19,190,216 – 19,190,323	-	5	107	93.08	-1.17	0.90	0.600284
				11747	19,190,283 – 19,190,402	-	6	120	98.15	-2.39	0.89	0.995008
				11748	19,190,323 – 19,190,442	-	5	120	98.65	-2.16	0.92	0.993773
				11749	19,190,362 – 19,190,474	-	5	114	94.82	-1.71	0.91	0.985408
7261	3R_DroMel_CAF1	19,190,648 – 19,190,762	- - - - - - - - -	11750	19,190,648 – 19,190,762	+	6	114	97.54	-2.16	0.86	0.940729
7261	3R_DroMel_CAF1	19,190,648 – 19,190,762	- - - - - - - - -	11751	19,190,648 – 19,190,762	-	6	114	97.54	-3.16	0.92	0.999834
7262	3R_DroMel_CAF1	19,190,992 – 19,191,101	- - - - - - - - -	11752	19,190,992 – 19,191,101	+	4	110	91.93	-1.33	0.92	0.578567
7263	3R_DroMel_CAF1	19,191,668 – 19,191,774	- - - - - - - - -	11753	19,191,668 – 19,191,774	-	5	115	85.20	-1.57	0.90	0.731394
7264	3R_DroMel_CAF1	19,192,543 – 19,192,750	- - - - - - - - -	11754	19,192,543 – 19,192,639	-	3	104	80.86	-1.59	0.73	0.622601
				11755	19,192,572 – 19,192,670	-	5	107	89.41	-1.80	0.87	0.957075
				11756	19,192,603 – 19,192,710	-	6	120	93.82	-1.93	0.86	0.873142
				11757	19,192,639 – 19,192,750	-	6	120	95.03	-2.32	0.85	0.942532
7265	3R_DroMel_CAF1	19,192,895 – 19,193,000	- - - - - - - - -	11758	19,192,895 – 19,193,000	+	6	120	77.83	-1.92	0.58	0.838059
7265	3R_DroMel_CAF1	19,192,895 – 19,193,000	- - - - - - - - -	11759	19,192,895 – 19,193,000	-	6	120	77.83	-1.62	0.56	0.560350
7266	3R_DroMel_CAF1	19,193,803 – 19,193,918	- - - - - - - - -	11760	19,193,803 – 19,193,918	+	6	120	92.58	-3.10	0.84	0.985881
7266	3R_DroMel_CAF1	19,193,803 – 19,193,918	- - - - - - - - -	11761	19,193,803 – 19,193,918	-	6	120	92.58	-2.19	0.80	0.550127
7267	3R_DroMel_CAF1	19,194,641 – 19,194,761	- - - - - - - - -	11762	19,194,641 – 19,194,761	+	6	120	97.39	-1.89	0.92	0.991025
7268	3R_DroMel_CAF1	19,195,111 – 19,195,203	- - - - - - - - -	11763	19,195,111 – 19,195,203	-	5	114	82.35	-2.39	0.55	0.808025
7269	3R_DroMel_CAF1	19,196,842 – 19,196,945	- - - - - - - - -	11764	19,196,842 – 19,196,945	-	5	120	82.88	-1.68	0.65	0.520729
7270	3R_DroMel_CAF1	19,198,004 – 19,198,097	- - - - - - - - -	11765	19,198,004 – 19,198,097	-	5	96	87.86	-1.55	0.73	0.500000
7271	3R_DroMel_CAF1	19,199,447 – 19,199,545	- - - - - - - - -	11766	19,199,447 – 19,199,545	+	5	98	81.55	-2.00	0.57	0.636949
7271	3R_DroMel_CAF1	19,199,447 – 19,199,545	- - - - - - - - -	11767	19,199,447 – 19,199,545	-	5	98	81.55	-2.37	0.63	0.927064
7272	3R_DroMel_CAF1	19,199,620 – 19,199,740	- - - "knownCDS=Parent=FBtr0084411;Name=CG6784-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6784-RA" - - - - -	11768	19,199,620 – 19,199,740	+	6	120	78.50	-2.38	0.53	0.904333
7273	3R_DroMel_CAF1	19,205,587 – 19,205,707	- - - "knownCDS=Parent=FBtr0084430;Name=CG4393-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4393-RA" - - - - -	11769	19,205,587 – 19,205,707	+	6	120	80.17	-1.79	0.60	0.671133
7274	3R_DroMel_CAF1	19,212,533 – 19,212,639	- - - - - - - - -	11770	19,212,533 – 19,212,639	-	6	114	78.62	-1.33	0.74	0.780761
7275	3R_DroMel_CAF1	19,215,035 – 19,215,148	- - - - - - - - -	11771	19,215,035 – 19,215,148	+	5	116	70.00	-1.71	0.37	0.542409
7276	3R_DroMel_CAF1	19,215,363 – 19,215,454	- - - - - - - - -	11772	19,215,363 – 19,215,454	+	6	115	64.95	-2.13	0.46	0.972819
7277	3R_DroMel_CAF1	19,218,004 – 19,218,107	- - - - - - - - -	11773	19,218,004 – 19,218,107	+	6	114	81.70	-1.93	0.71	0.776536
7277	3R_DroMel_CAF1	19,218,004 – 19,218,107	- - - - - - - - -	11774	19,218,004 – 19,218,107	-	6	114	81.70	-1.45	0.73	0.626328
7278	3R_DroMel_CAF1	19,220,638 – 19,220,735	- - - - - - - - -	11775	19,220,638 – 19,220,735	+	6	99	77.48	-2.08	0.78	0.968983
7278	3R_DroMel_CAF1	19,220,638 – 19,220,735	- - - - - - - - -	11776	19,220,638 – 19,220,735	-	6	99	77.48	-2.49	0.81	0.978278
7279	3R_DroMel_CAF1	19,221,950 – 19,222,053	- - - - - - - - -	11777	19,221,950 – 19,222,053	-	5	114	76.71	-1.85	0.56	0.751955
7280	3R_DroMel_CAF1	19,224,196 – 19,224,290	- - - - - - - - -	11778	19,224,196 – 19,224,290	+	6	103	80.96	-1.60	0.63	0.570147
7280	3R_DroMel_CAF1	19,224,196 – 19,224,290	- - - - - - - - -	11779	19,224,196 – 19,224,290	-	6	103	80.96	-2.10	0.69	0.854064
7281	3R_DroMel_CAF1	19,224,516 – 19,224,615	- - - - - - - - -	11780	19,224,516 – 19,224,615	-	6	100	74.49	-2.18	0.33	0.580664
7282	3R_DroMel_CAF1	19,225,650 – 19,225,743	- - - - - - - - -	11781	19,225,650 – 19,225,743	+	5	93	85.38	-1.82	0.76	0.752763
7283	3R_DroMel_CAF1	19,226,196 – 19,226,292	- - - - - - - - -	11782	19,226,196 – 19,226,292	-	6	111	81.00	-2.35	0.55	0.739415
7284	3R_DroMel_CAF1	19,229,782 – 19,229,887	- - - "knownCDS=Parent=FBtr0084413;Name=CG17379-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17379-RA" - - - - -	11783	19,229,782 – 19,229,887	+	6	105	79.43	-1.92	0.56	0.699991
7285	3R_DroMel_CAF1	19,229,960 – 19,230,080	- - - "knownCDS=Parent=FBtr0084413;Name=CG17379-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17379-RA" - - - - -	11784	19,229,960 – 19,230,080	+	6	120	81.00	-1.82	0.60	0.605866
7286	3R_DroMel_CAF1	19,232,179 – 19,232,299	- - - "knownCDS=Parent=FBtr0084413;Name=CG17379-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17379-RA" - - - - -	11785	19,232,179 – 19,232,299	+	6	120	86.00	-1.97	0.81	0.684898
7287	3R_DroMel_CAF1	19,233,241 – 19,233,343	- - - - - - - - -	11786	19,233,241 – 19,233,343	+	6	113	82.08	-2.40	0.62	0.758639
7288	3R_DroMel_CAF1	19,236,433 – 19,236,576	- - - "knownCDS=Parent=FBtr0084427;Name=CG4374-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4374-RA" - - - - -	11787	19,236,433 – 19,236,536	-	6	120	78.32	-1.64	0.66	0.831719
7288	3R_DroMel_CAF1	19,236,433 – 19,236,576		11788	19,236,459 – 19,236,576	-	6	120	84.06	-2.32	0.64	0.500000
7289	3R_DroMel_CAF1	19,237,616 – 19,237,747	- - - "knownCDS=Parent=FBtr0084427;Name=CG4374-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4374-RA" - - - - -	11789	19,237,616 – 19,237,709	-	6	96	88.30	-2.54	0.80	0.756795
7289	3R_DroMel_CAF1	19,237,616 – 19,237,747		11790	19,237,636 – 19,237,747	-	6	120	81.59	-1.54	0.77	0.707436
7290	3R_DroMel_CAF1	19,239,219 – 19,239,317	- - - - - - - - -	11791	19,239,219 – 19,239,317	+	5	104	87.14	-1.51	0.82	0.626548
7291	3R_DroMel_CAF1	19,245,207 – 19,245,317	- - - - - - - - -	11792	19,245,207 – 19,245,317	-	6	112	86.38	-2.75	0.73	0.587552
7292	3R_DroMel_CAF1	19,247,932 – 19,248,025	- - - - - - - - -	11793	19,247,932 – 19,248,025	-	6	108	81.40	-1.64	0.65	0.608375
7293	3R_DroMel_CAF1	19,252,904 – 19,253,002	- - - - - - - - -	11794	19,252,904 – 19,253,002	+	6	98	82.24	-1.94	0.63	0.593292
7294	3R_DroMel_CAF1	19,255,928 – 19,256,030	- - - - - - - - -	11795	19,255,928 – 19,256,030	-	6	111	78.42	-2.03	0.50	0.650456
7295	3R_DroMel_CAF1	19,259,822 – 19,259,924	- - - - - - - - -	11796	19,259,822 – 19,259,924	-	5	111	90.57	-1.64	0.76	0.640223
7296	3R_DroMel_CAF1	19,265,212 – 19,265,335	- - - - - - - - -	11797	19,265,212 – 19,265,305	+	6	102	81.05	-1.89	0.69	0.793235
7296	3R_DroMel_CAF1	19,265,212 – 19,265,335	- - - - - - - - -	11798	19,265,233 – 19,265,335	+	6	107	82.41	-2.24	0.70	0.784013
7297	3R_DroMel_CAF1	19,265,581 – 19,265,685	- - "RNAmicro=f:19265581_t:19265686_strand:+_p:0.688681" - - - - - -	11799	19,265,581 – 19,265,685	-	6	106	86.35	-2.94	0.73	0.646508
7298	3R_DroMel_CAF1	19,269,729 – 19,269,825	- - - - - - - - -	11800	19,269,729 – 19,269,825	-	6	97	79.50	-2.31	0.57	0.886050
7299	3R_DroMel_CAF1	19,273,676 – 19,273,766	- - - - - - - - -	11801	19,273,676 – 19,273,766	+	6	112	80.73	-1.51	0.77	0.755328
7300	3R_DroMel_CAF1	19,274,244 – 19,274,342	- - - - - - - - -	11802	19,274,244 – 19,274,342	+	4	103	86.67	-3.29	0.83	0.995148
7300	3R_DroMel_CAF1	19,274,244 – 19,274,342	- - - - - - - - -	11803	19,274,244 – 19,274,342	-	4	103	86.67	-2.06	0.81	0.910413
7301	3R_DroMel_CAF1	19,276,170 – 19,276,260	- - - - - - - - -	11804	19,276,170 – 19,276,260	+	5	97	92.31	-2.60	0.81	0.991629
7302	3R_DroMel_CAF1	19,279,267 – 19,279,388	- - - - - - - - -	11805	19,279,267 – 19,279,371	+	6	119	76.02	-2.99	0.44	0.991357
				11806	19,279,267 – 19,279,371	-	6	119	76.02	-2.05	0.46	0.741420
				11807	19,279,295 – 19,279,388	+	6	98	70.13	-2.02	0.29	0.579793
				11808	19,279,295 – 19,279,388	-	6	98	70.13	-2.40	0.32	0.946614
7303	3R_DroMel_CAF1	19,281,554 – 19,281,650	- - - - - - - - -	11809	19,281,554 – 19,281,650	-	5	103	74.70	-1.86	0.34	0.749323
7304	3R_DroMel_CAF1	19,282,901 – 19,283,032	- - - - - - - - -	11810	19,282,901 – 19,283,008	-	6	120	81.07	-2.76	0.56	0.874922
7304	3R_DroMel_CAF1	19,282,901 – 19,283,032	- - - - - - - - -	11811	19,282,931 – 19,283,032	-	6	114	79.12	-2.26	0.54	0.850270
7305	3R_DroMel_CAF1	19,283,257 – 19,283,385	- - - - - - - - -	11812	19,283,257 – 19,283,348	+	6	109	79.80	-1.65	0.60	0.600675
				11813	19,283,257 – 19,283,348	-	6	109	79.80	-1.76	0.60	0.677744
				11814	19,283,292 – 19,283,385	+	6	112	76.61	-3.11	0.60	0.994747
				11815	19,283,292 – 19,283,385	-	6	112	76.61	-1.89	0.49	0.635299
7306	3R_DroMel_CAF1	19,286,281 – 19,286,371	- - - - - - - - -	11816	19,286,281 – 19,286,371	-	5	101	80.78	-2.26	0.79	0.970055
7307	3R_DroMel_CAF1	19,287,753 – 19,287,861	- - - - - - - - -	11817	19,287,753 – 19,287,861	+	6	109	92.86	-1.98	0.88	0.944410
7307	3R_DroMel_CAF1	19,287,753 – 19,287,861	- - - - - - - - -	11818	19,287,753 – 19,287,861	-	6	109	92.86	-2.22	0.80	0.592400
7308	3R_DroMel_CAF1	19,291,538 – 19,291,663	- - - - - - - - -	11819	19,291,538 – 19,291,636	+	6	106	72.56	-2.17	0.28	0.559275
7308	3R_DroMel_CAF1	19,291,538 – 19,291,663	- - - - - - - - -	11820	19,291,563 – 19,291,663	+	6	102	75.23	-1.87	0.49	0.717965
7309	3R_DroMel_CAF1	19,293,623 – 19,293,715	- - - - - - - - -	11821	19,293,623 – 19,293,715	+	6	98	88.09	-3.94	0.83	0.991041
7310	3R_DroMel_CAF1	19,299,877 – 19,299,986	- - - - - - - - -	11822	19,299,877 – 19,299,986	-	6	120	72.10	-1.79	0.43	0.600456
7311	3R_DroMel_CAF1	19,303,575 – 19,303,691	- - - - - - - - -	11823	19,303,575 – 19,303,691	-	5	116	93.50	-2.11	0.79	0.921694
7312	3R_DroMel_CAF1	19,306,160 – 19,306,250	- - - - - - - - -	11824	19,306,160 – 19,306,250	-	6	101	87.11	-1.92	0.83	0.686315
7313	3R_DroMel_CAF1	19,307,742 – 19,307,897	- - - "knownCDS=Parent=FBtr0084414;Name=CG31225-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31225-RA" - - - - -	11825	19,307,742 – 19,307,858	+	6	116	77.01	-1.86	0.55	0.777397
				11826	19,307,742 – 19,307,858	-	6	116	77.01	-1.78	0.50	0.513098
				11827	19,307,780 – 19,307,897	+	6	118	77.95	-1.92	0.52	0.671756
				11828	19,307,780 – 19,307,897	-	6	118	77.95	-2.24	0.60	0.943099
7314	3R_DroMel_CAF1	19,320,845 – 19,320,953	- - - - - - - - -	11829	19,320,845 – 19,320,939	+	6	120	78.90	-3.37	0.84	0.971873
				11830	19,320,845 – 19,320,939	-	6	120	78.90	-2.61	0.90	0.972765
				11831	19,320,859 – 19,320,953	+	6	120	86.56	-3.55	0.82	0.970101
				11832	19,320,859 – 19,320,953	-	6	120	86.56	-3.39	0.89	0.994610
7315	3R_DroMel_CAF1	19,322,134 – 19,322,275	- - "RNAmicro=f:19322134_t:19322238_strand:-_p:0.660406" - - - - - -	11833	19,322,134 – 19,322,236	+	5	105	77.56	-5.82	0.66	0.997602
				11834	19,322,134 – 19,322,236	-	5	105	77.56	-3.36	0.61	0.999543
				11835	19,322,171 – 19,322,275	+	5	108	77.18	-2.30	0.47	0.949356
7316	3R_DroMel_CAF1	19,326,930 – 19,327,026	- - - - - - - - -	11836	19,326,930 – 19,327,026	+	6	116	70.16	-1.74	0.44	0.716834
7317	3R_DroMel_CAF1	19,329,025 – 19,329,160	- - - - - - - - -	11837	19,329,025 – 19,329,133	-	6	119	77.61	-1.91	0.59	0.862288
7317	3R_DroMel_CAF1	19,329,025 – 19,329,160	- - - - - - - - -	11838	19,329,055 – 19,329,160	-	6	114	79.99	-1.37	0.71	0.685657
7318	3R_DroMel_CAF1	19,332,832 – 19,332,930	- - - "knownCDS=texon3976;Parent=CG_NCBI_GNO_32521820, CG_BATZ_CON_47010702" - - - - -	11839	19,332,832 – 19,332,930	-	6	99	78.44	-0.96	0.75	0.570609
7319	3R_DroMel_CAF1	19,338,504 – 19,338,638	- - - - - - - - -	11840	19,338,504 – 19,338,600	+	6	104	83.12	-1.69	0.88	0.795973
7319	3R_DroMel_CAF1	19,338,504 – 19,338,638	- - - - - - - - -	11841	19,338,533 – 19,338,638	+	6	107	80.59	-1.21	0.72	0.561435
7320	3R_DroMel_CAF1	19,342,922 – 19,343,012	- - - - - - - - -	11842	19,342,922 – 19,343,012	+	6	103	81.13	-1.60	0.74	0.742981
7321	3R_DroMel_CAF1	19,358,699 – 19,358,838	- - - - - - - - -	11843	19,358,699 – 19,358,802	+	4	103	76.02	-2.14	0.62	0.957065
7321	3R_DroMel_CAF1	19,358,699 – 19,358,838	- - - - - - - - -	11844	19,358,722 – 19,358,838	+	5	116	72.37	-1.84	0.37	0.755258
7322	3R_DroMel_CAF1	19,360,001 – 19,360,105	- - - "knownCDS=Parent=FBtr0084420;Name=CG10170-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10170-RA" - - - - -	11845	19,360,001 – 19,360,105	-	6	104	77.18	-2.06	0.64	0.951412
7323	3R_DroMel_CAF1	19,364,802 – 19,364,898	- - - - - - - - -	11846	19,364,802 – 19,364,898	+	5	97	77.05	-1.69	0.22	0.588137
7323	3R_DroMel_CAF1	19,364,802 – 19,364,898	- - - - - - - - -	11847	19,364,802 – 19,364,898	-	5	97	77.05	-1.98	0.22	0.856816
7324	3R_DroMel_CAF1	19,371,061 – 19,371,156	- - - - - - - - -	11848	19,371,061 – 19,371,156	-	5	95	95.58	-1.77	0.87	0.965656
7325	3R_DroMel_CAF1	19,373,423 – 19,373,514	- - - - - - - - -	11849	19,373,423 – 19,373,514	-	6	103	89.89	-2.40	0.79	0.621193
7326	3R_DroMel_CAF1	19,377,281 – 19,377,398	- - - - - - - - -	11850	19,377,281 – 19,377,398	-	5	120	78.28	-1.72	0.56	0.500000
7327	3R_DroMel_CAF1	19,377,565 – 19,377,669	- - - - - - - - -	11851	19,377,565 – 19,377,669	-	6	114	77.44	-2.12	0.52	0.857351
7328	3R_DroMel_CAF1	19,377,854 – 19,377,945	- - - - - - - - -	11852	19,377,854 – 19,377,945	-	6	111	80.79	-2.35	0.54	0.722313
7329	3R_DroMel_CAF1	19,379,586 – 19,379,680	- - - - - - - - -	11853	19,379,586 – 19,379,680	+	6	103	79.78	-1.42	0.67	0.653481
7330	3R_DroMel_CAF1	19,380,974 – 19,381,076	- - - "knownCDS=Parent=FBtr0084417;Name=CG10164-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10164-RA" - - - - -	11854	19,380,974 – 19,381,076	+	5	102	85.78	-1.94	0.70	0.707659
7331	3R_DroMel_CAF1	19,383,742 – 19,383,876	- - - - - - - - -	11855	19,383,742 – 19,383,851	+	6	120	67.12	-3.52	0.29	0.997190
				11856	19,383,742 – 19,383,851	-	6	120	67.12	-2.27	0.18	0.507513
				11857	19,383,772 – 19,383,876	+	5	104	75.15	-2.59	0.25	0.995438
				11858	19,383,772 – 19,383,876	-	5	104	75.15	-2.16	0.18	0.967433
7332	3R_DroMel_CAF1	19,383,991 – 19,384,086	- - - - - - - - -	11859	19,383,991 – 19,384,086	-	5	110	73.11	-1.83	0.10	0.883043
7333	3R_DroMel_CAF1	19,393,783 – 19,393,874	- - - - - - - - -	11860	19,393,783 – 19,393,874	-	6	120	82.11	-1.26	0.86	0.541170
7334	3R_DroMel_CAF1	19,393,965 – 19,394,074	- - - - - - - - -	11861	19,393,965 – 19,394,074	+	6	111	75.21	-2.13	0.63	0.978055
7335	3R_DroMel_CAF1	19,394,237 – 19,394,329	- - - - - - - - -	11862	19,394,237 – 19,394,329	-	6	92	81.59	-1.90	0.61	0.615515
7336	3R_DroMel_CAF1	19,396,453 – 19,396,545	- - - - - - - - -	11863	19,396,453 – 19,396,545	-	6	98	91.35	-2.73	0.89	0.996879
7337	3R_DroMel_CAF1	19,397,067 – 19,397,218	- - - - - - - - -	11864	19,397,067 – 19,397,182	+	5	120	83.93	-1.74	0.64	0.500000
				11865	19,397,067 – 19,397,182	-	5	120	83.93	-2.20	0.73	0.902797
				11866	19,397,107 – 19,397,218	-	5	120	83.07	-2.51	0.52	0.734099
7338	3R_DroMel_CAF1	19,409,219 – 19,409,311	- - - - - - - - -	11867	19,409,219 – 19,409,311	+	5	93	96.97	-2.14	0.87	0.986893
7338	3R_DroMel_CAF1	19,409,219 – 19,409,311	- - - - - - - - -	11868	19,409,219 – 19,409,311	-	5	93	96.97	-1.42	0.90	0.828167
7339	3R_DroMel_CAF1	19,414,992 – 19,415,101	- - - "knownCDS=Parent=FBtr0084486;Name=CG10182-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10182-RA" - - - - -	11869	19,414,992 – 19,415,101	+	6	111	77.57	-1.84	0.72	0.943469
7340	3R_DroMel_CAF1	19,419,940 – 19,420,060	- - - "knownCDS=Parent=FBtr0084484;Name=CG16723-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16723-RA" - - - - -	11870	19,419,940 – 19,420,060	-	6	120	77.94	-1.39	0.70	0.800877
7341	3R_DroMel_CAF1	19,420,168 – 19,420,326	- - - "knownCDS=Parent=FBtr0084484;Name=CG16723-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16723-RA" - - - - -	11871	19,420,168 – 19,420,286	-	6	120	80.21	-2.72	0.72	0.952981
7341	3R_DroMel_CAF1	19,420,168 – 19,420,326		11872	19,420,206 – 19,420,326	-	6	120	81.11	-2.14	0.72	0.874698
7342	3R_DroMel_CAF1	19,423,057 – 19,423,177	- - - "knownCDS=Parent=FBtr0084483;Name=CG10183-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10183-RA" - - - - -	11873	19,423,057 – 19,423,177	-	6	120	77.33	-1.82	0.71	0.942394
7343	3R_DroMel_CAF1	19,425,855 – 19,425,960	- - - - - - - - -	11874	19,425,855 – 19,425,960	-	4	106	82.68	-1.93	0.58	0.509722
7344	3R_DroMel_CAF1	19,427,059 – 19,427,170	"known=exon_Parent=Dmel\CR_TRNA_ATT_14000255" - - - "Rfam=BX649616.5/107237-107318_RF00005;tRNA;\|4e-09" - - - "Flybase=FBgn0051143:CR31143:cytosolic_tRNA_gene\|6e-60"	11875	19,427,059 – 19,427,170	-	6	120	88.08	-1.53	0.96	0.936095
7345	3R_DroMel_CAF1	19,436,405 – 19,436,497	- - - - - - - - -	11876	19,436,405 – 19,436,497	+	6	108	69.08	-2.32	0.20	0.634610
7346	3R_DroMel_CAF1	19,442,005 – 19,442,110	- - - - - - - - -	11877	19,442,005 – 19,442,110	+	5	119	91.86	-1.21	0.91	0.659623
7346	3R_DroMel_CAF1	19,442,005 – 19,442,110	- - - - - - - - -	11878	19,442,005 – 19,442,110	-	5	119	91.86	-1.37	0.87	0.779799
7347	3R_DroMel_CAF1	19,444,361 – 19,444,452	- - - - - - - - -	11879	19,444,361 – 19,444,452	+	6	93	93.09	-3.19	0.82	0.968931
7347	3R_DroMel_CAF1	19,444,361 – 19,444,452	- - - - - - - - -	11880	19,444,361 – 19,444,452	-	6	93	93.09	-2.66	0.79	0.724210
7348	3R_DroMel_CAF1	19,451,346 – 19,451,438	- - - - - - - - -	11881	19,451,346 – 19,451,438	+	6	112	84.83	-1.79	0.86	0.765496
7348	3R_DroMel_CAF1	19,451,346 – 19,451,438	- - - - - - - - -	11882	19,451,346 – 19,451,438	-	6	112	84.83	-4.03	0.91	0.995810
7349	3R_DroMel_CAF1	19,451,610 – 19,451,705	- - - - - - - - -	11883	19,451,610 – 19,451,705	-	6	103	80.55	-1.67	0.68	0.743953
7350	3R_DroMel_CAF1	19,452,496 – 19,452,602	- - - - - - - - -	11884	19,452,496 – 19,452,602	-	6	111	80.60	-1.13	0.72	0.513433
7351	3R_DroMel_CAF1	19,453,098 – 19,453,203	- - - - - - - - -	11885	19,453,098 – 19,453,203	+	6	111	66.44	-2.10	0.25	0.645535
7352	3R_DroMel_CAF1	19,455,094 – 19,455,186	- - - - - - - - -	11886	19,455,094 – 19,455,186	+	5	106	70.31	-1.67	0.16	0.528092
7353	3R_DroMel_CAF1	19,463,358 – 19,463,487	- - - - - - - - -	11887	19,463,358 – 19,463,451	+	5	117	78.87	-2.34	0.74	0.984787
				11888	19,463,388 – 19,463,487	+	6	113	77.40	-1.72	0.56	0.678656
				11889	19,463,388 – 19,463,487	-	6	113	77.40	-2.27	0.51	0.902215
7354	3R_DroMel_CAF1	19,465,951 – 19,466,071	- - - - - - - - -	11890	19,465,951 – 19,466,071	+	5	120	93.00	-2.40	0.77	0.939761
7355	3R_DroMel_CAF1	19,474,554 – 19,474,654	- - "RNAmicro=f:19474554_t:19474661_strand:+_p:0.590276" - - - - - -	11891	19,474,554 – 19,474,654	-	6	108	70.87	-3.44	0.63	0.997175
7356	3R_DroMel_CAF1	19,485,328 – 19,485,432	- - - - - - - - -	11892	19,485,328 – 19,485,432	+	5	105	93.10	-1.50	0.78	0.541026
7357	3R_DroMel_CAF1	19,485,732 – 19,485,850	- - - - - - - - -	11893	19,485,732 – 19,485,850	-	5	118	89.73	-2.02	0.75	0.831947
7358	3R_DroMel_CAF1	19,489,552 – 19,489,643	- - - - - - - - -	11894	19,489,552 – 19,489,643	+	5	92	96.06	-2.74	0.92	0.999821
7359	3R_DroMel_CAF1	19,489,918 – 19,490,014	- - - - - - - - -	11895	19,489,918 – 19,490,014	-	5	96	89.57	-1.54	0.78	0.625882
7360	3R_DroMel_CAF1	19,490,138 – 19,490,257	- - - - - - - - -	11896	19,490,138 – 19,490,257	+	5	119	74.98	-1.87	0.04	0.910152
7360	3R_DroMel_CAF1	19,490,138 – 19,490,257	- - - - - - - - -	11897	19,490,138 – 19,490,257	-	5	119	74.98	-1.69	0.21	0.709978
7361	3R_DroMel_CAF1	19,512,752 – 19,512,862	- - - - - - - - -	11898	19,512,752 – 19,512,862	-	6	110	78.99	-1.72	0.66	0.835712
7362	3R_DroMel_CAF1	19,522,305 – 19,522,447	- - - - - - - - -	11899	19,522,305 – 19,522,419	+	6	114	79.53	-1.86	0.66	0.851548
				11900	19,522,345 – 19,522,447	+	6	108	78.28	-1.99	0.75	0.950007
				11901	19,522,345 – 19,522,447	-	6	108	78.28	-1.82	0.52	0.543440
7363	3R_DroMel_CAF1	19,522,765 – 19,522,901	- - - "knownCDS=Parent=FBtr0084474;Name=CG10251-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10251-RA" - - - - -	11902	19,522,765 – 19,522,884	+	6	120	81.49	-1.56	0.65	0.561844
				11903	19,522,805 – 19,522,901	+	6	100	82.31	-2.50	0.65	0.791550
				11904	19,522,805 – 19,522,901	-	6	100	82.31	-2.62	0.70	0.861108
7364	3R_DroMel_CAF1	19,523,061 – 19,523,221	- - - - - - - - -	11905	19,523,061 – 19,523,181	+	6	120	82.61	-1.94	0.62	0.534288
				11906	19,523,101 – 19,523,221	+	6	120	82.00	-2.35	0.58	0.662307
				11907	19,523,101 – 19,523,221	-	6	120	82.00	-2.31	0.59	0.683578
7365	3R_DroMel_CAF1	19,525,498 – 19,525,590	- - - - - - - - -	11908	19,525,498 – 19,525,590	+	4	115	80.72	-2.05	0.69	0.896651
7366	3R_DroMel_CAF1	19,538,108 – 19,538,216	- - - "knownCDS=Parent=FBtr0084445;Name=CG10300-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10300-RA" - - - - -	11909	19,538,108 – 19,538,216	-	6	108	77.77	-1.45	0.67	0.793798
7367	3R_DroMel_CAF1	19,538,927 – 19,539,035	- - - "knownCDS=Parent=FBtr0084472;Name=nau-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10250-RA" - - - - -	11910	19,538,927 – 19,539,035	+	6	114	82.10	-1.49	0.75	0.631755
7368	3R_DroMel_CAF1	19,541,201 – 19,541,300	- - - - - - - - -	11911	19,541,201 – 19,541,300	-	5	112	80.42	-2.63	0.71	0.989643
7369	3R_DroMel_CAF1	19,542,043 – 19,542,141	- - - "knownCDS=Parent=FBtr0084472;Name=nau-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10250-RA" - - - - -	11912	19,542,043 – 19,542,141	-	6	109	81.51	-1.53	0.65	0.547683
7370	3R_DroMel_CAF1	19,549,978 – 19,550,084	- - - - - - - - -	11913	19,549,978 – 19,550,084	+	5	107	77.02	-1.75	0.10	0.807050
7371	3R_DroMel_CAF1	19,555,819 – 19,555,911	- - - - - - - - -	11914	19,555,819 – 19,555,911	-	6	101	81.56	-2.38	0.63	0.821976
7372	3R_DroMel_CAF1	19,556,023 – 19,556,129	- - - - - - - - -	11915	19,556,023 – 19,556,129	+	6	120	79.99	-1.27	0.76	0.685753
7373	3R_DroMel_CAF1	19,560,579 – 19,560,671	- - - - - - - - -	11916	19,560,579 – 19,560,671	+	5	104	90.53	-2.63	0.83	0.997447
7373	3R_DroMel_CAF1	19,560,579 – 19,560,671	- - - - - - - - -	11917	19,560,579 – 19,560,671	-	5	104	90.53	-2.83	0.85	0.999278
7374	3R_DroMel_CAF1	19,565,081 – 19,565,362	- - - - - - - - -	11918	19,565,081 – 19,565,174	+	5	100	77.63	-1.91	0.55	0.758109
				11919	19,565,081 – 19,565,174	-	5	100	77.63	-2.54	0.38	0.979714
				11920	19,565,105 – 19,565,198	+	4	108	83.58	-1.82	0.63	0.622844
				11921	19,565,105 – 19,565,198	-	4	108	83.58	-2.25	0.71	0.923943
				11922	19,565,198 – 19,565,292	+	5	100	74.95	-2.57	0.47	0.995570
				11923	19,565,198 – 19,565,292	-	5	100	74.95	-1.78	0.37	0.597327
				11924	19,565,256 – 19,565,362	+	6	110	80.17	-1.11	0.70	0.500000
7375	3R_DroMel_CAF1	19,565,422 – 19,565,518	- - - - - - - - -	11925	19,565,422 – 19,565,518	+	6	97	87.47	-2.11	0.89	0.944491
7375	3R_DroMel_CAF1	19,565,422 – 19,565,518	- - - - - - - - -	11926	19,565,422 – 19,565,518	-	6	97	87.47	-1.41	0.90	0.651500
7376	3R_DroMel_CAF1	19,566,248 – 19,566,355	- - - - - - - - -	11927	19,566,248 – 19,566,355	-	5	115	82.07	-1.70	0.75	0.710550
7377	3R_DroMel_CAF1	19,569,227 – 19,569,320	- - - - - - - - -	11928	19,569,227 – 19,569,320	+	5	98	73.46	-2.00	0.47	0.908286
7378	3R_DroMel_CAF1	19,570,688 – 19,570,783	- - - - - - - - -	11929	19,570,688 – 19,570,783	-	5	103	78.94	-2.20	0.33	0.807621
7379	3R_DroMel_CAF1	19,571,884 – 19,571,987	- - - - - - - - -	11930	19,571,884 – 19,571,987	+	6	110	79.82	-2.70	0.62	0.950364
7379	3R_DroMel_CAF1	19,571,884 – 19,571,987	- - - - - - - - -	11931	19,571,884 – 19,571,987	-	6	110	79.82	-2.40	0.50	0.765138
7380	3R_DroMel_CAF1	19,573,074 – 19,573,174	- - - "knownCDS=Parent=FBtr0084450, FBtr0084451;Name=Hmgcr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10367-RA, FlyBase+Annotation+IDs:CG10367-RB" - - - - -	11932	19,573,074 – 19,573,174	+	6	106	79.05	-1.88	0.55	0.664341
7380	3R_DroMel_CAF1	19,573,074 – 19,573,174		11933	19,573,074 – 19,573,174	-	6	106	79.05	-1.90	0.57	0.730738
7381	3R_DroMel_CAF1	19,577,637 – 19,577,757	- - - "knownCDS=Parent=FBtr0084468;Name=CG10225-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10225-RA" - - - - -	11934	19,577,637 – 19,577,757	+	6	120	81.22	-2.15	0.59	0.708047
7382	3R_DroMel_CAF1	19,581,652 – 19,581,771	- - - "knownCDS=Parent=FBtr0084467;Name=CG10221-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10221-RA" - - - - -	11935	19,581,652 – 19,581,771	-	6	120	81.17	-1.33	0.68	0.542778
7383	3R_DroMel_CAF1	19,609,550 – 19,609,644	- - - - - - - - -	11936	19,609,550 – 19,609,644	+	5	107	91.71	-1.68	0.84	0.912653
7383	3R_DroMel_CAF1	19,609,550 – 19,609,644	- - - - - - - - -	11937	19,609,550 – 19,609,644	-	5	107	91.71	-2.22	0.82	0.984153
7384	3R_DroMel_CAF1	19,611,046 – 19,611,171	- - - - - - - - -	11938	19,611,046 – 19,611,143	-	6	102	71.27	-2.31	0.37	0.951396
7384	3R_DroMel_CAF1	19,611,046 – 19,611,171	- - - - - - - - -	11939	19,611,080 – 19,611,171	-	6	97	82.22	-2.21	0.62	0.678815
7385	3R_DroMel_CAF1	19,612,316 – 19,612,420	- - - - - - - - -	11940	19,612,316 – 19,612,420	-	5	113	78.15	-1.53	0.80	0.845711
7386	3R_DroMel_CAF1	19,612,874 – 19,612,986	- - - - - - - - -	11941	19,612,874 – 19,612,986	-	5	116	93.34	-1.24	0.91	0.743764
7387	3R_DroMel_CAF1	19,615,324 – 19,615,440	- - - - - - - - -	11942	19,615,324 – 19,615,440	-	5	117	84.36	-1.75	0.73	0.668995
7388	3R_DroMel_CAF1	19,618,447 – 19,618,601	- - - - - - - - -	11943	19,618,447 – 19,618,561	-	4	120	69.03	-2.34	0.48	0.977656
7388	3R_DroMel_CAF1	19,618,447 – 19,618,601	- - - - - - - - -	11944	19,618,487 – 19,618,601	-	5	120	70.41	-2.11	0.33	0.946938
7389	3R_DroMel_CAF1	19,624,985 – 19,625,076	- - - "knownCDS=Parent=FBtr0084459;Name=mbc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10379-RA" - - - - -	11945	19,624,985 – 19,625,076	+	6	115	75.08	-1.85	0.64	0.950893
7390	3R_DroMel_CAF1	19,630,483 – 19,630,582	- - - - - - - - -	11946	19,630,483 – 19,630,582	+	3	104	95.51	-2.45	0.89	0.871111
7391	3R_DroMel_CAF1	19,632,203 – 19,632,296	- - - - - - - - -	11947	19,632,203 – 19,632,296	-	6	100	76.27	-0.89	0.82	0.741984
7392	3R_DroMel_CAF1	19,632,625 – 19,632,740	- - - "knownCDS=Parent=FBtr0084530, FBtr0084529, FBtr0100312;Name=CG33111-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33111-RB, FlyBase+Annotation+IDs:CG33111-RA, FlyBase+Annotation+IDs:CG33111-RC" - - - - -	11948	19,632,625 – 19,632,740	+	6	116	79.28	-1.85	0.53	0.531445
7393	3R_DroMel_CAF1	19,633,118 – 19,633,214	- - - "knownCDS=Parent=FBtr0084530, FBtr0084529, FBtr0100312;Name=CG33111-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33111-RB, FlyBase+Annotation+IDs:CG33111-RA, FlyBase+Annotation+IDs:CG33111-RC" - - - - -	11949	19,633,118 – 19,633,214	-	6	100	83.63	-1.87	0.75	0.640426
7394	3R_DroMel_CAF1	19,636,428 – 19,636,547	- - - "knownCDS=Parent=FBtr0089623;Name=CG10192-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10192-RA" - - - - -	11950	19,636,428 – 19,636,547	+	6	119	80.34	-2.39	0.59	0.873224
7395	3R_DroMel_CAF1	19,642,113 – 19,642,203	- - - "knownCDS=Parent=FBtr0089623;Name=CG10192-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10192-RA" - - - - -	11951	19,642,113 – 19,642,203	+	6	102	74.75	-2.45	0.37	0.907007
7396	3R_DroMel_CAF1	19,642,278 – 19,642,375	- - - "knownCDS=Parent=FBtr0089623;Name=CG10192-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10192-RA" - - - - -	11952	19,642,278 – 19,642,375	+	6	110	76.32	-1.67	0.69	0.933985
7396	3R_DroMel_CAF1	19,642,278 – 19,642,375		11953	19,642,278 – 19,642,375	-	6	110	76.32	-3.15	0.73	0.989729
7397	3R_DroMel_CAF1	19,646,561 – 19,646,654	- - - - - - - - -	11954	19,646,561 – 19,646,654	+	6	97	80.00	-2.19	0.64	0.890613
7398	3R_DroMel_CAF1	19,651,951 – 19,652,173	"known=U1_snRNA ID=Dmel\CG_RFAM_INF_49002381;Rfam ID=U1;Rfam_accession=RF00003;" - - - "Rfam=AY187768.1/1130-1295_RF00003;U1;\|6e-53" "Noncode=n364,u344,AE003588,U1,Drosophila_melanogaster_(fruit_fly)\|1e-65" - - "Flybase=FBgn0003916:small_nuclear_RNA_U1_at_21D:nuclear_snRNA_gene\|9e-67"	11955	19,651,951 – 19,652,063	+	6	113	78.16	-1.95	0.49	0.574155
				11956	19,651,951 – 19,652,063	-	6	113	78.16	-1.80	0.56	0.706536
				11957	19,652,063 – 19,652,173	+	6	112	96.04	-1.26	0.93	0.888335
7399	3R_DroMel_CAF1	19,653,244 – 19,653,352	- - - - - - - - -	11958	19,653,244 – 19,653,352	+	6	120	90.30	-2.29	0.79	0.533874
7400	3R_DroMel_CAF1	19,653,590 – 19,653,782	"known=U1_snRNA ID=Dmel\CG_RFAM_INF_49002382;Rfam ID=U1;Rfam_accession=RF00003;" - - - "Rfam=AY187768.1/1130-1295_RF00003;U1;\|4e-81" "Noncode=n364,u344,AE003588,U1,Drosophila_melanogaster_(fruit_fly)\|7e-91" - - "Flybase=FBgn0003916:small_nuclear_RNA_U1_at_21D:nuclear_snRNA_gene\|6e-92"	11959	19,653,590 – 19,653,708	+	6	120	94.63	-1.31	0.88	0.615553
				11960	19,653,668 – 19,653,782	+	6	116	87.88	-1.94	0.82	0.608647
				11961	19,653,668 – 19,653,782	-	6	116	87.88	-1.54	0.87	0.655925
7401	3R_DroMel_CAF1	19,655,737 – 19,655,842	- - - - - - - - -	11962	19,655,737 – 19,655,842	+	5	110	83.53	-1.89	0.70	0.739913
7402	3R_DroMel_CAF1	19,660,928 – 19,661,039	- - - - - - - - -	11963	19,660,928 – 19,661,039	+	5	120	75.42	-3.31	0.43	0.999763
7402	3R_DroMel_CAF1	19,660,928 – 19,661,039	- - - - - - - - -	11964	19,660,928 – 19,661,039	-	5	120	75.42	-3.41	0.50	0.999832
7403	3R_DroMel_CAF1	19,685,178 – 19,685,320	"known=U1_snRNA ID=Dmel\CG_RFAM_INF_49002383;Rfam ID=U1;Rfam_accession=RF00003;" - - - "Rfam=AY187768.1/1130-1295_RF00003;U1;\|4e-62" "Noncode=n5572,u344,X53544,U1,Drosophila_melanogaster_(fruit_fly)\|2e-71" - - "Flybase=FBgn0003916:small_nuclear_RNA_U1_at_21D:nuclear_snRNA_gene\|2e-72"	11965	19,685,178 – 19,685,281	+	6	120	92.70	-1.44	0.97	0.985697
				11966	19,685,178 – 19,685,281	-	6	120	92.70	-1.03	1.00	0.925304
				11967	19,685,202 – 19,685,320	+	6	120	98.04	-1.51	0.88	0.794634
7404	3R_DroMel_CAF1	19,687,755 – 19,687,869	- - - "knownCDS=Parent=FBtr0084527;Name=Pli-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5212-RA" - - - - -	11968	19,687,755 – 19,687,869	-	6	114	81.70	-1.42	0.72	0.600025
7405	3R_DroMel_CAF1	19,689,302 – 19,689,402	- - - - - - - - -	11969	19,689,302 – 19,689,402	+	5	104	75.47	-2.08	0.52	0.927679
7406	3R_DroMel_CAF1	19,696,041 – 19,696,133	- - - - - - - - -	11970	19,696,041 – 19,696,133	+	6	104	89.65	-3.52	0.77	0.903430
7406	3R_DroMel_CAF1	19,696,041 – 19,696,133	- - - - - - - - -	11971	19,696,041 – 19,696,133	-	6	104	89.65	-3.82	0.70	0.642621
7407	3R_DroMel_CAF1	19,700,310 – 19,700,401	- - - - - - - - -	11972	19,700,310 – 19,700,401	-	6	98	89.41	-1.58	0.86	0.622811
7408	3R_DroMel_CAF1	19,711,949 – 19,712,041	- - - - - - - - -	11973	19,711,949 – 19,712,041	+	6	99	68.82	-2.35	0.20	0.688807
7409	3R_DroMel_CAF1	19,713,496 – 19,713,615	- - - - - - - - -	11974	19,713,496 – 19,713,615	-	5	120	95.39	-2.05	0.85	0.979049
7410	3R_DroMel_CAF1	19,715,620 – 19,715,842	- - - - - - - - -	11975	19,715,620 – 19,715,723	+	5	104	92.53	-2.03	0.82	0.963874
				11976	19,715,620 – 19,715,723	-	5	104	92.53	-1.21	0.86	0.527375
				11977	19,715,654 – 19,715,763	+	5	109	94.94	-1.65	0.92	0.983766
				11978	19,715,723 – 19,715,842	+	5	120	91.65	-1.35	0.81	0.544325
7411	3R_DroMel_CAF1	19,720,056 – 19,720,231	- - - - - - - - -	11979	19,720,056 – 19,720,176	+	5	120	98.00	-1.80	0.99	0.994255
				11980	19,720,056 – 19,720,176	-	5	120	98.00	-1.57	0.89	0.843146
				11981	19,720,096 – 19,720,212	+	5	120	89.90	-1.47	0.81	0.641645
				11982	19,720,136 – 19,720,231	-	4	99	94.41	-1.88	0.87	0.823018
7412	3R_DroMel_CAF1	19,720,531 – 19,720,679	- - - - - - - - -	11983	19,720,531 – 19,720,644	+	4	120	91.56	-1.59	0.81	0.615548
7412	3R_DroMel_CAF1	19,720,531 – 19,720,679	- - - - - - - - -	11984	19,720,571 – 19,720,679	+	4	120	87.43	-1.93	0.84	0.894047
7413	3R_DroMel_CAF1	19,721,131 – 19,721,225	- - - "knownCDS=Parent=FBtr0084524;Name=sba-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13598-RB" - - - - -	11985	19,721,131 – 19,721,225	+	6	120	81.79	-1.49	0.80	0.686272
7414	3R_DroMel_CAF1	19,725,164 – 19,725,270	- - - "knownCDS=Parent=FBtr0084523;Name=sba-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13598-RA" - - - - -	11986	19,725,164 – 19,725,270	+	6	115	67.96	-2.51	0.41	0.992293
7415	3R_DroMel_CAF1	19,729,353 – 19,729,453	- - - - - - - - -	11987	19,729,353 – 19,729,453	-	4	113	71.99	-1.67	0.55	0.578650
7416	3R_DroMel_CAF1	19,737,807 – 19,737,965	- - - - - - - - -	11988	19,737,807 – 19,737,926	-	5	120	94.24	-1.99	0.84	0.975805
				11989	19,737,847 – 19,737,965	+	5	120	94.39	-2.75	0.82	0.994135
				11990	19,737,847 – 19,737,965	-	5	120	94.39	-2.24	0.92	0.999519
7417	3R_DroMel_CAF1	19,738,264 – 19,738,359	- - - - - - - - -	11991	19,738,264 – 19,738,359	+	3	104	76.82	-2.08	0.61	0.919964
7418	3R_DroMel_CAF1	19,743,792 – 19,743,886	- - - - - - - - -	11992	19,743,792 – 19,743,886	-	6	100	80.48	-1.36	0.68	0.596825
7419	3R_DroMel_CAF1	19,745,903 – 19,746,033	- - - - - - - - -	11993	19,745,903 – 19,745,993	-	6	102	81.79	-2.41	0.63	0.805336
				11994	19,745,935 – 19,746,033	+	6	102	68.36	-1.61	0.44	0.594432
				11995	19,745,935 – 19,746,033	-	6	102	68.36	-2.76	0.39	0.996010
7420	3R_DroMel_CAF1	19,749,342 – 19,749,499	- - - "knownCDS=Parent=FBtr0084490;Name=CG31141-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31141-RA" - - - - -	11996	19,749,342 – 19,749,459	-	5	120	90.55	-2.49	0.78	0.977845
7420	3R_DroMel_CAF1	19,749,342 – 19,749,499		11997	19,749,379 – 19,749,499	-	5	120	97.17	-1.94	0.94	0.996290
7421	3R_DroMel_CAF1	19,749,779 – 19,749,899	- - - "knownCDS=Parent=FBtr0084490;Name=CG31141-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31141-RA" - - - - -	11998	19,749,779 – 19,749,899	-	5	120	93.25	-1.41	0.83	0.670094
7422	3R_DroMel_CAF1	19,752,305 – 19,752,413	- - - - - - - - -	11999	19,752,305 – 19,752,413	+	6	108	82.16	-1.48	0.66	0.500000
7423	3R_DroMel_CAF1	19,760,362 – 19,760,479	- - - "knownCDS=Parent=FBtr0084494, FBtr0084495;Name=CG5854-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5854-RA, FlyBase+Annotation+IDs:CG5854-RB" - - - - -	12000	19,760,362 – 19,760,479	+	6	120	80.68	-1.19	0.69	0.500000
7424	3R_DroMel_CAF1	19,767,170 – 19,767,269	- - - - - - - - -	12001	19,767,170 – 19,767,269	+	6	109	80.24	-1.71	0.58	0.530738
7424	3R_DroMel_CAF1	19,767,170 – 19,767,269	- - - - - - - - -	12002	19,767,170 – 19,767,269	-	6	109	80.24	-1.53	0.70	0.742332
7425	3R_DroMel_CAF1	19,768,638 – 19,768,740	- - - "knownCDS=Parent=FBtr0089498;Name=Gdh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5320-RA" - - - - -	12003	19,768,638 – 19,768,740	+	6	114	77.61	-1.51	0.60	0.642753
7426	3R_DroMel_CAF1	19,768,843 – 19,768,939	- - - - - - - - -	12004	19,768,843 – 19,768,939	+	5	117	80.15	-2.06	0.42	0.539563
7426	3R_DroMel_CAF1	19,768,843 – 19,768,939	- - - - - - - - -	12005	19,768,843 – 19,768,939	-	5	117	80.15	-2.60	0.48	0.947013
7427	3R_DroMel_CAF1	19,769,838 – 19,769,937	- - - - - - - - -	12006	19,769,838 – 19,769,937	+	6	102	79.64	-2.18	0.69	0.926621
7428	3R_DroMel_CAF1	19,774,932 – 19,775,025	- - - - - - - - -	12007	19,774,932 – 19,775,025	-	5	94	96.69	-1.67	0.96	0.989204
7429	3R_DroMel_CAF1	19,792,071 – 19,792,188	- - - - - - - - -	12008	19,792,071 – 19,792,163	+	3	101	91.84	-2.16	0.91	0.877544
				12009	19,792,071 – 19,792,163	-	3	101	91.84	-3.34	0.91	0.984336
				12010	19,792,098 – 19,792,188	+	3	104	88.59	-1.91	0.82	0.599084
				12011	19,792,098 – 19,792,188	-	3	104	88.59	-2.72	0.88	0.956306
7430	3R_DroMel_CAF1	19,794,996 – 19,795,097	- - - - - - - - -	12012	19,794,996 – 19,795,097	-	6	116	79.62	-1.43	0.63	0.572419
7431	3R_DroMel_CAF1	19,796,184 – 19,796,276	- - - - - - - - -	12013	19,796,184 – 19,796,276	+	6	102	81.55	-2.75	0.70	0.912372
7432	3R_DroMel_CAF1	19,797,176 – 19,797,279	- - - - - - - - -	12014	19,797,176 – 19,797,279	-	6	103	80.84	-2.31	0.50	0.561709
7433	3R_DroMel_CAF1	19,798,160 – 19,798,262	- - - "knownCDS=Parent=FBtr0084497, FBtr0084498, FBtr0084499;Name=CG31140-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31140-RA, FlyBase+Annotation+IDs:CG31140-RB, FlyBase+Annotation+IDs:CG31140-RC" - - - - -	12015	19,798,160 – 19,798,262	-	6	107	84.71	-1.89	0.77	0.582250
7434	3R_DroMel_CAF1	19,799,887 – 19,800,094	- - - "knownCDS=Parent=FBtr0084497;Name=CG31140-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31140-RA" - - - - -	12016	19,799,887 – 19,799,981	+	6	97	82.25	-3.61	0.75	0.948133
				12017	19,799,887 – 19,799,981	-	6	97	82.25	-2.56	0.64	0.806106
				12018	19,799,918 – 19,800,021	+	6	117	77.34	-2.37	0.40	0.733441
				12019	19,799,918 – 19,800,021	-	6	117	77.34	-2.02	0.52	0.790284
				12020	19,799,981 – 19,800,094	-	6	120	78.23	-1.63	0.57	0.584397
7435	3R_DroMel_CAF1	19,801,675 – 19,801,782	- - - - - - - - -	12021	19,801,675 – 19,801,782	+	4	120	50.97	-2.92	0.56	0.994648
7435	3R_DroMel_CAF1	19,801,675 – 19,801,782	- - - - - - - - -	12022	19,801,675 – 19,801,782	-	4	120	50.97	-1.94	0.45	0.980422
7436	3R_DroMel_CAF1	19,802,201 – 19,802,308	- - - "knownCDS=Parent=FBtr0084497, FBtr0084498, FBtr0084499;Name=CG31140-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31140-RA, FlyBase+Annotation+IDs:CG31140-RB, FlyBase+Annotation+IDs:CG31140-RC" - - - - -	12023	19,802,201 – 19,802,308	+	6	120	73.99	-0.78	0.78	0.745012
7437	3R_DroMel_CAF1	19,802,877 – 19,802,997	- - - "knownCDS=Parent=FBtr0084497, FBtr0084498, FBtr0084499;Name=CG31140-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31140-RA, FlyBase+Annotation+IDs:CG31140-RB, FlyBase+Annotation+IDs:CG31140-RC" - - - - -	12024	19,802,877 – 19,802,997	-	6	120	85.67	-2.19	0.78	0.645477
7438	3R_DroMel_CAF1	19,803,242 – 19,803,351	- - - "knownCDS=Parent=FBtr0084497, FBtr0084498;Name=CG31140-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31140-RA, FlyBase+Annotation+IDs:CG31140-RB" - - - - -	12025	19,803,242 – 19,803,351	+	6	109	77.81	-1.37	0.62	0.561762
7439	3R_DroMel_CAF1	19,805,208 – 19,805,307	- - - "knownCDS=Parent=FBtr0084497, FBtr0084498, FBtr0084499;Name=CG31140-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31140-RA, FlyBase+Annotation+IDs:CG31140-RB, FlyBase+Annotation+IDs:CG31140-RC" - - - - -	12026	19,805,208 – 19,805,307	+	6	112	81.87	-1.56	0.75	0.672319
7439	3R_DroMel_CAF1	19,805,208 – 19,805,307		12027	19,805,208 – 19,805,307	-	6	112	81.87	-1.69	0.76	0.742529
7440	3R_DroMel_CAF1	19,809,200 – 19,809,405	- - - - - - - - -	12028	19,809,200 – 19,809,293	+	6	103	85.61	-3.26	0.92	0.996732
				12029	19,809,200 – 19,809,293	-	6	103	85.61	-2.98	0.84	0.963004
				12030	19,809,293 – 19,809,405	+	6	119	80.30	-1.66	0.66	0.725520
				12031	19,809,293 – 19,809,405	-	6	119	80.30	-1.07	0.72	0.500000
7441	3R_DroMel_CAF1	19,809,521 – 19,809,627	- - "RNAmicro=f:19809521_t:19809631_strand:+_p:0.999995" - - - - - -	12032	19,809,521 – 19,809,627	+	5	111	75.14	-4.67	0.76	0.999420
7442	3R_DroMel_CAF1	19,825,497 – 19,825,617	- - - "knownCDS=Parent=FBtr0084506, FBtr0084507, FBtr0084508;Name=KrT95D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5405-RB, FlyBase+Annotation+IDs:CG5405-RA, FlyBase+Annotation+IDs:CG5405-RC" - - - - -	12033	19,825,497 – 19,825,617	+	6	120	80.78	-1.69	0.64	0.661456
7443	3R_DroMel_CAF1	19,825,874 – 19,825,976	- - - "knownCDS=Parent=FBtr0084506, FBtr0084507, FBtr0084508;Name=KrT95D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5405-RB, FlyBase+Annotation+IDs:CG5405-RA, FlyBase+Annotation+IDs:CG5405-RC" - - - - -	12034	19,825,874 – 19,825,976	-	6	115	81.13	-1.41	0.80	0.692940
7444	3R_DroMel_CAF1	19,830,838 – 19,830,954	- - - - - - - - -	12035	19,830,838 – 19,830,954	+	5	120	86.09	-2.71	0.62	0.776094
7444	3R_DroMel_CAF1	19,830,838 – 19,830,954	- - - - - - - - -	12036	19,830,838 – 19,830,954	-	5	120	86.09	-2.00	0.63	0.512054
7445	3R_DroMel_CAF1	19,832,356 – 19,832,450	- - - - - - - - -	12037	19,832,356 – 19,832,450	-	5	101	87.95	-1.60	0.72	0.513001
7446	3R_DroMel_CAF1	19,836,118 – 19,836,250	- - - - - - - - -	12038	19,836,118 – 19,836,231	+	4	119	86.06	-2.34	0.91	0.985149
				12039	19,836,118 – 19,836,231	-	4	119	86.06	-2.44	0.84	0.977126
				12040	19,836,158 – 19,836,250	-	4	104	78.14	-2.05	0.59	0.811350
7447	3R_DroMel_CAF1	19,836,664 – 19,836,760	- - - - - - - - -	12041	19,836,664 – 19,836,760	+	3	105	88.18	-2.60	0.68	0.633947
7448	3R_DroMel_CAF1	19,837,125 – 19,837,247	- - - - - - - - -	12042	19,837,125 – 19,837,215	-	5	101	84.33	-2.15	0.74	0.898279
				12043	19,837,151 – 19,837,247	+	6	110	76.54	-2.35	0.43	0.861465
				12044	19,837,151 – 19,837,247	-	6	110	76.54	-2.53	0.54	0.978865
7449	3R_DroMel_CAF1	19,849,620 – 19,849,810	- - - - - - - - -	12045	19,849,620 – 19,849,737	-	5	120	90.82	-2.04	0.76	0.865063
7449	3R_DroMel_CAF1	19,849,620 – 19,849,810	- - - - - - - - -	12046	19,849,700 – 19,849,810	+	5	114	90.60	-2.68	0.76	0.965515
7450	3R_DroMel_CAF1	19,851,864 – 19,851,961	- - - - - - - - -	12047	19,851,864 – 19,851,961	+	6	107	76.74	-2.02	0.49	0.747136
7451	3R_DroMel_CAF1	19,857,488 – 19,857,580	- - - - - - - - -	12048	19,857,488 – 19,857,580	+	5	92	95.00	-1.06	0.96	0.592683
7452	3R_DroMel_CAF1	19,869,499 – 19,869,688	- - - - - - - - -	12049	19,869,499 – 19,869,619	+	3	120	97.22	-1.69	0.94	0.641315
				12050	19,869,539 – 19,869,659	+	3	120	97.78	-1.91	0.97	0.827849
				12051	19,869,579 – 19,869,688	+	3	120	92.78	-2.00	0.98	0.940702
7453	3R_DroMel_CAF1	19,869,749 – 19,869,862	- - - "knownCDS=Parent=FBtr0084591;Name=Rox8-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5422-RD" - - - - -	12052	19,869,749 – 19,869,862	+	6	120	75.17	-2.14	0.47	0.888529
7453	3R_DroMel_CAF1	19,869,749 – 19,869,862		12053	19,869,749 – 19,869,862	-	6	120	75.17	-1.64	0.55	0.698782
7454	3R_DroMel_CAF1	19,870,943 – 19,871,056	- - - - - - - - -	12054	19,870,943 – 19,871,056	-	6	115	80.18	-1.25	0.70	0.587400
7455	3R_DroMel_CAF1	19,871,149 – 19,871,258	- - - "knownCDS=Parent=FBtr0084593;Name=Rox8-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5422-RF" - - - - -	12055	19,871,149 – 19,871,258	+	6	111	82.06	-1.47	0.69	0.562352
7456	3R_DroMel_CAF1	19,880,040 – 19,880,145	- - - - - - - - -	12056	19,880,040 – 19,880,145	-	5	105	79.19	-1.63	0.77	0.812106
7457	3R_DroMel_CAF1	19,887,375 – 19,887,482	- - - - - - - - -	12057	19,887,375 – 19,887,482	-	6	110	80.61	-1.22	0.69	0.519952
7458	3R_DroMel_CAF1	19,904,212 – 19,904,359	- - - - - - - - -	12058	19,904,212 – 19,904,322	+	6	117	79.73	-1.48	0.65	0.639674
7458	3R_DroMel_CAF1	19,904,212 – 19,904,359	- - - - - - - - -	12059	19,904,245 – 19,904,359	+	6	117	77.80	-1.26	0.74	0.790847
7459	3R_DroMel_CAF1	19,907,023 – 19,907,115	- - - - - - - - -	12060	19,907,023 – 19,907,115	+	5	101	73.28	-1.80	0.28	0.757748
7459	3R_DroMel_CAF1	19,907,023 – 19,907,115	- - - - - - - - -	12061	19,907,023 – 19,907,115	-	5	101	73.28	-1.82	0.36	0.726935
7460	3R_DroMel_CAF1	19,909,112 – 19,909,202	- - - - - - - - -	12062	19,909,112 – 19,909,202	+	6	109	80.11	-1.40	0.67	0.617273
7461	3R_DroMel_CAF1	19,912,242 – 19,912,354	- - - - - - - - -	12063	19,912,242 – 19,912,354	-	4	117	86.72	-1.50	0.70	0.551630
7462	3R_DroMel_CAF1	19,917,985 – 19,918,095	- - - - - - - - -	12064	19,917,985 – 19,918,095	+	6	120	78.00	-2.40	0.50	0.908552
7463	3R_DroMel_CAF1	19,919,710 – 19,919,806	- - - - - - - - -	12065	19,919,710 – 19,919,806	+	6	109	69.72	-1.87	0.37	0.671461
7464	3R_DroMel_CAF1	19,934,714 – 19,934,841	- - - - - - - - -	12066	19,934,714 – 19,934,820	-	5	113	78.41	-1.65	0.73	0.819177
7464	3R_DroMel_CAF1	19,934,714 – 19,934,841	- - - - - - - - -	12067	19,934,748 – 19,934,841	-	4	98	70.64	-1.50	0.68	0.900429
7465	3R_DroMel_CAF1	19,937,381 – 19,937,475	- - - "knownCDS=Parent=FBtr0084586;Name=CG13605-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13605-RA" - - - - -	12068	19,937,381 – 19,937,475	-	6	96	84.01	-1.90	0.75	0.623254
7466	3R_DroMel_CAF1	19,938,666 – 19,938,801	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000256;Name=Dmel_Leu_TAA_14000256;TFAMID=DmelLTAA-19938686" "tRNAscan=type:Leu:anticodon:TAA f:19938685_t:19938787_strand=+_cove=69.13" - - "Rfam=AE003746.3/81114-81197_RF00005;tRNA;\|7e-42" - - - "Flybase=FBgn0053536:CR33536:cytosolic_tRNA_gene\|1e-43"	12069	19,938,666 – 19,938,762	+	5	96	95.42	-1.29	0.90	0.773210
				12070	19,938,666 – 19,938,762	-	5	96	95.42	-1.56	0.93	0.972371
				12071	19,938,682 – 19,938,801	+	4	119	90.30	-2.74	0.96	0.997509
				12072	19,938,682 – 19,938,801	-	4	119	90.30	-2.32	0.97	0.993251
7467	3R_DroMel_CAF1	19,940,942 – 19,941,045	- - - "knownCDS=Parent=FBtr0084585;Name=CG13607-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13607-RA" - - - - -	12073	19,940,942 – 19,941,045	-	6	103	79.09	-1.39	0.63	0.559207
7468	3R_DroMel_CAF1	19,947,768 – 19,948,008	- - - "knownCDS=Parent=FBtr0084544;Name=CG6129-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6129-RB" - - - - -	12074	19,947,768 – 19,947,888	-	6	120	82.94	-1.95	0.73	0.702730
				12075	19,947,848 – 19,947,968	-	6	120	83.89	-2.73	0.77	0.862180
				12076	19,947,888 – 19,948,008	-	6	120	79.72	-1.95	0.60	0.783409
7469	3R_DroMel_CAF1	19,948,883 – 19,949,003	- - - "knownCDS=Parent=FBtr0084544;Name=CG6129-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6129-RB" - - - - -	12077	19,948,883 – 19,949,003	-	6	120	80.50	-1.34	0.66	0.531038
7470	3R_DroMel_CAF1	19,951,507 – 19,951,627	- - - "knownCDS=Parent=FBtr0084544;Name=CG6129-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6129-RB" - - - - -	12078	19,951,507 – 19,951,627	+	6	120	81.89	-2.83	0.54	0.778216
7471	3R_DroMel_CAF1	19,952,410 – 19,952,518	- - - "knownCDS=Parent=FBtr0084544;Name=CG6129-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6129-RB" - - - - -	12079	19,952,410 – 19,952,518	-	6	112	76.80	-1.60	0.67	0.888427
7472	3R_DroMel_CAF1	19,952,519 – 19,952,628	- - - - - - - - -	12080	19,952,519 – 19,952,628	+	3	118	68.66	-1.60	0.66	0.990967
7472	3R_DroMel_CAF1	19,952,519 – 19,952,628	- - - - - - - - -	12081	19,952,519 – 19,952,628	-	3	118	68.66	-1.71	0.61	0.983010
7473	3R_DroMel_CAF1	19,953,097 – 19,953,195	- - - - - - - - -	12082	19,953,097 – 19,953,195	+	6	107	82.49	-1.56	0.72	0.595437
7473	3R_DroMel_CAF1	19,953,097 – 19,953,195	- - - - - - - - -	12083	19,953,097 – 19,953,195	-	6	107	82.49	-1.46	0.76	0.593517
7474	3R_DroMel_CAF1	19,954,060 – 19,954,169	- - - "knownCDS=Parent=FBtr0084584;Name=CG5463-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5463-RA" - - - - -	12084	19,954,060 – 19,954,169	+	6	109	75.63	-2.24	0.38	0.705575
7475	3R_DroMel_CAF1	19,955,913 – 19,956,003	- - - - - - - - -	12085	19,955,913 – 19,956,003	+	5	90	95.22	-1.52	0.97	0.983480
7476	3R_DroMel_CAF1	19,964,104 – 19,964,219	- - - - - - - - -	12086	19,964,104 – 19,964,219	-	3	115	79.23	-2.76	0.62	0.984673
7477	3R_DroMel_CAF1	19,965,450 – 19,965,542	- - - - - - - - -	12087	19,965,450 – 19,965,542	+	6	104	69.91	-1.54	0.69	0.964881
7478	3R_DroMel_CAF1	19,979,531 – 19,979,623	- - - "knownCDS=Parent=FBtr0084550;Name=CG6178-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6178-RA" - - - - -	12088	19,979,531 – 19,979,623	+	6	107	77.48	-1.54	0.57	0.520840
7479	3R_DroMel_CAF1	19,981,420 – 19,981,510	- - - - - - - - -	12089	19,981,420 – 19,981,510	-	6	103	90.01	-1.87	0.93	0.982926
7480	3R_DroMel_CAF1	19,982,951 – 19,983,068	- - - "knownCDS=Parent=FBtr0100516;Name=Myo95E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5501-RE" - - - - -	12090	19,982,951 – 19,983,043	-	6	120	75.30	-1.85	0.86	0.977087
7480	3R_DroMel_CAF1	19,982,951 – 19,983,068		12091	19,982,972 – 19,983,068	-	6	110	85.56	-2.12	0.84	0.837364
7481	3R_DroMel_CAF1	19,983,288 – 19,983,408	- - - "knownCDS=Parent=FBtr0084578, FBtr0084579;Name=Myo95E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5501-RB, FlyBase+Annotation+IDs:CG5501-RD" - - - - -	12092	19,983,288 – 19,983,408	-	6	120	81.39	-2.31	0.58	0.730060
7482	3R_DroMel_CAF1	19,985,641 – 19,985,755	- - - "knownCDS=Parent=FBtr0084578, FBtr0084579;Name=Myo95E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5501-RB, FlyBase+Annotation+IDs:CG5501-RD" - - - - -	12093	19,985,641 – 19,985,755	-	6	120	76.89	-1.65	0.55	0.609952
7483	3R_DroMel_CAF1	19,985,777 – 19,985,867	- - - "knownCDS=Parent=FBtr0084578, FBtr0084579;Name=Myo95E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5501-RB, FlyBase+Annotation+IDs:CG5501-RD" - - - - -	12094	19,985,777 – 19,985,867	-	6	99	72.19	-2.21	0.47	0.969935
7484	3R_DroMel_CAF1	19,986,612 – 19,986,712	- - - - - - - - -	12095	19,986,612 – 19,986,712	-	6	106	79.52	-1.97	0.62	0.842678
7485	3R_DroMel_CAF1	19,987,177 – 19,987,267	- - - - - - - - -	12096	19,987,177 – 19,987,267	-	6	91	79.49	-1.62	0.69	0.807936
7486	3R_DroMel_CAF1	19,991,461 – 19,991,557	- - - "knownCDS=Parent=FBtr0084552;Name=Apc2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6193-RA" - - - - -	12097	19,991,461 – 19,991,557	-	6	102	79.89	-1.76	0.58	0.603509
7487	3R_DroMel_CAF1	19,995,575 – 19,995,669	- - - - - - - - -	12098	19,995,575 – 19,995,669	-	6	117	74.48	-2.44	0.40	0.946386
7488	3R_DroMel_CAF1	19,996,975 – 19,997,086	- - - - - - - - -	12099	19,996,975 – 19,997,086	+	4	111	75.47	-1.87	0.56	0.681071
7489	3R_DroMel_CAF1	19,999,326 – 19,999,435	- - - - - - - - -	12100	19,999,326 – 19,999,435	-	5	120	73.40	-1.92	0.17	0.914464
7490	3R_DroMel_CAF1	20,005,173 – 20,005,293	- - - - - - - - -	12101	20,005,173 – 20,005,293	+	3	120	93.16	-2.00	0.93	0.858260
7491	3R_DroMel_CAF1	20,007,211 – 20,007,315	- - - - - - - - -	12102	20,007,211 – 20,007,315	-	5	117	91.80	-2.64	0.75	0.936610
7492	3R_DroMel_CAF1	20,008,300 – 20,008,390	- - - - - - - - -	12103	20,008,300 – 20,008,390	-	6	97	83.25	-3.17	0.55	0.705116
7493	3R_DroMel_CAF1	20,009,991 – 20,010,122	- - - - - - - - -	12104	20,009,991 – 20,010,107	+	3	119	74.93	-1.94	0.58	0.868679
7493	3R_DroMel_CAF1	20,009,991 – 20,010,122	- - - - - - - - -	12105	20,010,031 – 20,010,122	+	5	97	66.00	-1.90	0.55	0.954330
7494	3R_DroMel_CAF1	20,012,926 – 20,013,080	- - - "knownCDS=Parent=FBtr0084554;Name=CHORD-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6198-RA" - - - - -	12106	20,012,926 – 20,013,040	-	6	120	77.72	-1.77	0.70	0.924820
				12107	20,012,960 – 20,013,080	+	6	120	77.89	-1.47	0.59	0.520519
				12108	20,012,960 – 20,013,080	-	6	120	77.89	-2.55	0.52	0.953828
7495	3R_DroMel_CAF1	20,025,905 – 20,025,998	- - - - - - - - -	12109	20,025,905 – 20,025,998	-	4	94	92.18	-1.67	0.84	0.718826
7496	3R_DroMel_CAF1	20,028,573 – 20,028,669	- - - - - - - - -	12110	20,028,573 – 20,028,669	+	5	100	96.31	-1.35	0.95	0.912824
7497	3R_DroMel_CAF1	20,040,642 – 20,040,732	- - - - - - - - -	12111	20,040,642 – 20,040,732	-	5	90	97.78	-1.76	0.91	0.968159
7498	3R_DroMel_CAF1	20,043,922 – 20,044,048	- - "RNAmicro=f:20043956_t:20044054_strand:+_p:0.629211" "knownCDS=Parent=FBtr0084572;Name=CG17786-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17786-RA" - - - - -	12112	20,043,922 – 20,044,016	+	6	98	85.80	-1.78	0.80	0.566835
				12113	20,043,956 – 20,044,048	+	6	99	80.42	-2.87	0.67	0.950991
				12114	20,043,956 – 20,044,048	-	6	99	80.42	-1.91	0.66	0.817411
7499	3R_DroMel_CAF1	20,045,628 – 20,045,733	- - - - - - - - -	12115	20,045,628 – 20,045,733	-	6	113	71.29	-1.52	0.57	0.788791
7500	3R_DroMel_CAF1	20,051,789 – 20,051,893	- - - "knownCDS=Parent=FBtr0084565;Name=CG5669-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5669-RA" - - - - -	12116	20,051,789 – 20,051,893	-	4	104	99.04	-1.83	0.99	0.667635
7501	3R_DroMel_CAF1	20,051,959 – 20,052,070	- - - "knownCDS=Parent=FBtr0084565;Name=CG5669-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5669-RA" - - - - -	12117	20,051,959 – 20,052,070	-	6	111	81.08	-1.77	0.59	0.543431
7502	3R_DroMel_CAF1	20,053,085 – 20,053,205	- - - "knownCDS=Parent=FBtr0084560;Name=CG13609-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13609-RA" - - - - -	12118	20,053,085 – 20,053,205	+	5	120	89.42	-2.15	0.75	0.885347
7503	3R_DroMel_CAF1	20,055,278 – 20,055,398	- - - "knownCDS=Parent=FBtr0084564;Name=CG5677-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5677-RA" - - - - -	12119	20,055,278 – 20,055,398	-	5	120	91.08	-1.52	0.88	0.903697
7504	3R_DroMel_CAF1	20,056,141 – 20,056,261	- - - - - - - - -	12120	20,056,141 – 20,056,261	+	4	120	89.44	-1.45	0.77	0.533827
7505	3R_DroMel_CAF1	20,056,869 – 20,056,989	- - - - - - - - -	12121	20,056,869 – 20,056,989	-	4	120	92.17	-1.44	0.85	0.550220
7506	3R_DroMel_CAF1	20,057,200 – 20,057,305	- - - - - - - - -	12122	20,057,200 – 20,057,305	+	4	105	91.27	-2.26	0.85	0.953020
7506	3R_DroMel_CAF1	20,057,200 – 20,057,305	- - - - - - - - -	12123	20,057,200 – 20,057,305	-	4	105	91.27	-3.65	0.85	0.987175
7507	3R_DroMel_CAF1	20,058,261 – 20,058,418	- - - "knownCDS=Parent=FBtr0084563;Name=mask-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33106-RB" - - - - -	12124	20,058,261 – 20,058,381	-	6	120	76.62	-1.89	0.64	0.938404
7507	3R_DroMel_CAF1	20,058,261 – 20,058,418		12125	20,058,301 – 20,058,418	-	6	117	82.12	-2.17	0.86	0.919032
7508	3R_DroMel_CAF1	20,066,006 – 20,066,148	- - - "knownCDS=Parent=FBtr0084563;Name=mask-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33106-RB" - - - - -	12126	20,066,006 – 20,066,117	+	6	111	76.40	-2.21	0.52	0.929054
				12127	20,066,037 – 20,066,148	+	6	114	74.06	-1.60	0.59	0.825968
				12128	20,066,037 – 20,066,148	-	6	114	74.06	-2.30	0.47	0.963371
7509	3R_DroMel_CAF1	20,066,592 – 20,066,712	- - - "knownCDS=Parent=FBtr0084563;Name=mask-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33106-RB" - - - - -	12129	20,066,592 – 20,066,712	-	6	120	74.39	-1.68	0.52	0.655272
7510	3R_DroMel_CAF1	20,067,800 – 20,067,903	- - - "knownCDS=Parent=FBtr0084563;Name=mask-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33106-RB" - - - - -	12130	20,067,800 – 20,067,903	-	6	117	79.11	-1.34	0.63	0.525331
7511	3R_DroMel_CAF1	20,068,402 – 20,068,494	- - - "knownCDS=Parent=FBtr0084563;Name=mask-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33106-RB" - - - - -	12131	20,068,402 – 20,068,494	-	6	92	78.04	-1.24	0.65	0.566028
7512	3R_DroMel_CAF1	20,070,428 – 20,070,528	- - - "knownCDS=Parent=FBtr0084563;Name=mask-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33106-RB" - - - - -	12132	20,070,428 – 20,070,528	-	6	111	79.29	-1.46	0.61	0.510046
7513	3R_DroMel_CAF1	20,072,547 – 20,072,690	- - - "knownCDS=Parent=FBtr0084563;Name=mask-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33106-RB" - - - - -	12133	20,072,547 – 20,072,651	+	6	108	76.08	-1.31	0.64	0.658111
				12134	20,072,584 – 20,072,690	+	6	111	75.60	-2.86	0.56	0.994833
				12135	20,072,584 – 20,072,690	-	6	111	75.60	-2.85	0.54	0.994657
7514	3R_DroMel_CAF1	20,091,023 – 20,091,117	- - - - "Rfam=AE003746.3/81114-81197_RF00005;tRNA;\|3e-12" - - - "Flybase=FBgn0051130:CR31130:cytosolic_tRNA_gene\|3e-18"	12136	20,091,023 – 20,091,117	+	6	98	75.37	-2.79	0.74	0.991041
7514	3R_DroMel_CAF1	20,091,023 – 20,091,117		12137	20,091,023 – 20,091,117	-	6	98	75.37	-1.40	0.73	0.921138
7515	3R_DroMel_CAF1	20,096,913 – 20,097,029	- - - - - - - - -	12138	20,096,913 – 20,097,029	-	4	119	87.23	-1.48	0.72	0.555135
7516	3R_DroMel_CAF1	20,100,534 – 20,100,654	- - - "knownCDS=Parent=FBtr0084598;Name=Orct2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13610-RA" - - - - -	12139	20,100,534 – 20,100,654	+	6	120	78.11	-1.69	0.54	0.514007
7517	3R_DroMel_CAF1	20,115,978 – 20,116,089	- - - "knownCDS=Parent=FBtr0084602;Name=CG6364-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6364-RA" - - - - -	12140	20,115,978 – 20,116,089	+	6	111	76.57	-0.88	0.71	0.500000
7518	3R_DroMel_CAF1	20,120,665 – 20,120,759	- - "RNAmicro=f:20120665_t:20120770_strand:-_p:0.665564" - - - - - -	12141	20,120,665 – 20,120,759	+	5	106	75.20	-2.53	0.69	0.997642
7518	3R_DroMel_CAF1	20,120,665 – 20,120,759		12142	20,120,665 – 20,120,759	-	5	106	75.20	-2.27	0.51	0.976154
7519	3R_DroMel_CAF1	20,122,508 – 20,122,628	- - - - - - - - -	12143	20,122,508 – 20,122,628	+	5	120	97.33	-1.13	0.95	0.548603
7519	3R_DroMel_CAF1	20,122,508 – 20,122,628	- - - - - - - - -	12144	20,122,508 – 20,122,628	-	5	120	97.33	-1.42	0.90	0.793047
7520	3R_DroMel_CAF1	20,127,305 – 20,127,416	- - - - - - - - -	12145	20,127,305 – 20,127,416	+	5	118	81.72	-3.25	0.42	0.968707
7521	3R_DroMel_CAF1	20,127,647 – 20,127,754	- - - - - - - - -	12146	20,127,647 – 20,127,754	+	5	115	94.92	-1.84	0.82	0.904040
7521	3R_DroMel_CAF1	20,127,647 – 20,127,754	- - - - - - - - -	12147	20,127,647 – 20,127,754	-	5	115	94.92	-1.51	0.83	0.720461
7522	3R_DroMel_CAF1	20,129,410 – 20,129,543	- - - - - - - - -	12148	20,129,410 – 20,129,515	+	5	112	90.88	-1.65	0.97	0.989333
7522	3R_DroMel_CAF1	20,129,410 – 20,129,543	- - - - - - - - -	12149	20,129,439 – 20,129,543	-	5	104	93.94	-1.79	0.90	0.988935
7523	3R_DroMel_CAF1	20,130,435 – 20,130,534	- - - - - - - - -	12150	20,130,435 – 20,130,534	+	6	120	80.78	-1.50	0.67	0.627264
7524	3R_DroMel_CAF1	20,131,595 – 20,131,709	- - - "knownCDS=Parent=FBtr0084603;Name=crb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6383-RA" - - - - -	12151	20,131,595 – 20,131,709	+	6	118	80.14	-2.04	0.64	0.847111
7525	3R_DroMel_CAF1	20,132,180 – 20,132,300	- - "RNAmicro=f:20132180_t:20132299_strand:+_p:0.827679" "knownCDS=Parent=FBtr0084603;Name=crb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6383-RA" - - - - -	12152	20,132,180 – 20,132,300	-	6	120	82.39	-1.85	0.71	0.695776
7526	3R_DroMel_CAF1	20,133,321 – 20,133,414	- - - - - - - - -	12153	20,133,321 – 20,133,414	-	6	113	81.69	-1.22	0.76	0.524790
7527	3R_DroMel_CAF1	20,133,930 – 20,134,041	- - - "knownCDS=Parent=FBtr0084603;Name=crb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6383-RA" - - - - -	12154	20,133,930 – 20,134,041	-	6	114	82.02	-1.73	0.67	0.639934
7528	3R_DroMel_CAF1	20,135,399 – 20,135,505	- - - - - - - - -	12155	20,135,399 – 20,135,505	-	6	108	79.88	-2.00	0.51	0.508715
7529	3R_DroMel_CAF1	20,141,066 – 20,141,186	- - - "knownCDS=Parent=FBtr0084633;Name=CG5720-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5720-RA" - - - - -	12156	20,141,066 – 20,141,186	-	6	120	83.72	-1.74	0.88	0.816797
7530	3R_DroMel_CAF1	20,144,249 – 20,144,339	- - - - - - - - -	12157	20,144,249 – 20,144,339	-	4	93	72.68	-1.90	0.50	0.637995
7531	3R_DroMel_CAF1	20,148,409 – 20,148,507	- - - "knownCDS=Parent=FBtr0084604;Name=BRWD3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31132-RA" - - - - -	12158	20,148,409 – 20,148,507	+	6	106	80.07	-1.39	0.63	0.506137
7532	3R_DroMel_CAF1	20,148,713 – 20,148,812	- - - "knownCDS=Parent=FBtr0084604;Name=BRWD3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31132-RA" - - - - -	12159	20,148,713 – 20,148,812	+	6	102	78.46	-1.80	0.52	0.506469
7533	3R_DroMel_CAF1	20,149,059 – 20,149,164	- - - "knownCDS=Parent=FBtr0084604;Name=BRWD3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31132-RA" - - - - -	12160	20,149,059 – 20,149,164	-	6	105	89.33	-1.25	0.89	0.516082
7534	3R_DroMel_CAF1	20,158,726 – 20,158,820	- - - "knownCDS=Parent=FBtr0084632;Name=CG5728-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5728-RA" - - - - -	12161	20,158,726 – 20,158,820	+	6	101	79.45	-2.03	0.54	0.701541
7535	3R_DroMel_CAF1	20,163,684 – 20,163,804	- - - "knownCDS=Parent=FBtr0084606;Name=CG6432-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6432-RA" - - - - -	12162	20,163,684 – 20,163,804	+	6	120	82.94	-1.60	0.70	0.541815
7536	3R_DroMel_CAF1	20,167,189 – 20,167,318	- - - - - - - - -	12163	20,167,189 – 20,167,289	+	6	100	74.28	-1.58	0.55	0.671430
7536	3R_DroMel_CAF1	20,167,189 – 20,167,318	- - - - - - - - -	12164	20,167,209 – 20,167,318	+	6	110	75.37	-1.32	0.62	0.612402
7537	3R_DroMel_CAF1	20,182,455 – 20,182,572	- - - "knownCDS=Parent=FBtr0084629;Name=Golgin84-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17785-RA" - - - - -	12165	20,182,455 – 20,182,572	+	6	117	77.32	-1.26	0.65	0.592680
7538	3R_DroMel_CAF1	20,183,497 – 20,183,653	- - - - - - - - -	12166	20,183,497 – 20,183,613	+	6	120	78.77	-1.73	0.80	0.917887
				12167	20,183,497 – 20,183,613	-	6	120	78.77	-1.72	0.76	0.908069
				12168	20,183,535 – 20,183,653	-	6	120	79.14	-1.50	0.69	0.777400
7539	3R_DroMel_CAF1	20,188,179 – 20,188,273	- - - - - - - - -	12169	20,188,179 – 20,188,273	-	5	94	79.79	-2.01	0.68	0.899848
7540	3R_DroMel_CAF1	20,194,597 – 20,194,688	- - - "knownCDS=Parent=FBtr0084613;Name=CG33341-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33341-RA" - - - - -	12170	20,194,597 – 20,194,688	+	6	108	78.21	-1.70	0.57	0.654696
7541	3R_DroMel_CAF1	20,196,455 – 20,196,567	- - - - - - - - -	12171	20,196,455 – 20,196,567	-	6	113	80.06	-1.28	0.67	0.555357
7542	3R_DroMel_CAF1	20,200,871 – 20,200,977	- - - - - - - - -	12172	20,200,871 – 20,200,977	-	5	106	79.11	-2.19	0.66	0.952997
7543	3R_DroMel_CAF1	20,205,390 – 20,205,492	- - - - - - - - -	12173	20,205,390 – 20,205,492	+	5	105	94.15	-3.33	0.77	0.978051
7543	3R_DroMel_CAF1	20,205,390 – 20,205,492	- - - - - - - - -	12174	20,205,390 – 20,205,492	-	5	105	94.15	-2.38	0.74	0.694265
7544	3R_DroMel_CAF1	20,208,206 – 20,208,358	- - - - - - - - -	12175	20,208,206 – 20,208,303	-	6	105	81.79	-2.56	0.74	0.903939
7544	3R_DroMel_CAF1	20,208,206 – 20,208,358	- - - - - - - - -	12176	20,208,268 – 20,208,358	+	5	90	86.33	-2.92	0.74	0.984117
7545	3R_DroMel_CAF1	20,214,572 – 20,214,679	- - - - - - - - -	12177	20,214,572 – 20,214,679	-	6	120	86.01	-1.89	0.84	0.744766
7546	3R_DroMel_CAF1	20,215,868 – 20,215,960	- - - "knownCDS=Parent=FBtr0084620;Name=CG5768-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5768-RA" - - - - -	12178	20,215,868 – 20,215,960	+	5	98	91.60	-2.04	0.73	0.640151
7547	3R_DroMel_CAF1	20,221,880 – 20,222,024	- - - - - - - - -	12179	20,221,880 – 20,221,996	+	6	120	95.52	-1.88	0.85	0.765149
7547	3R_DroMel_CAF1	20,221,880 – 20,222,024	- - - - - - - - -	12180	20,221,918 – 20,222,024	+	6	117	78.09	-1.18	0.84	0.792687
7548	3R_DroMel_CAF1	20,223,207 – 20,223,313	- - - - - - - - -	12181	20,223,207 – 20,223,313	+	5	109	90.67	-1.97	0.79	0.916598
7549	3R_DroMel_CAF1	20,223,512 – 20,223,606	- - - - - - - - -	12182	20,223,512 – 20,223,606	-	3	96	89.58	-3.11	0.78	0.898340
7550	3R_DroMel_CAF1	20,225,481 – 20,225,596	- - - - - - - - -	12183	20,225,481 – 20,225,596	-	6	117	80.63	-3.02	0.57	0.940387
7551	3R_DroMel_CAF1	20,227,344 – 20,227,501	- - - - - - - - -	12184	20,227,344 – 20,227,461	+	6	120	91.07	-2.15	0.81	0.658451
				12185	20,227,344 – 20,227,461	-	6	120	91.07	-3.92	0.88	0.999290
				12186	20,227,381 – 20,227,501	+	6	120	91.11	-2.03	0.85	0.828339
				12187	20,227,381 – 20,227,501	-	6	120	91.11	-4.34	0.88	0.999585
7552	3R_DroMel_CAF1	20,233,985 – 20,234,081	- - - - - - - - -	12188	20,233,985 – 20,234,081	+	3	104	73.68	-1.87	0.75	0.995368
7552	3R_DroMel_CAF1	20,233,985 – 20,234,081	- - - - - - - - -	12189	20,233,985 – 20,234,081	-	3	104	73.68	-2.24	0.57	0.978679
7553	3R_DroMel_CAF1	20,234,620 – 20,234,723	- - - - - - - - -	12190	20,234,620 – 20,234,723	+	6	103	96.57	-0.93	0.95	0.717839
7554	3R_DroMel_CAF1	20,236,268 – 20,236,358	- - - - - - - - -	12191	20,236,268 – 20,236,358	+	6	108	70.33	-2.07	0.29	0.656486
7554	3R_DroMel_CAF1	20,236,268 – 20,236,358	- - - - - - - - -	12192	20,236,268 – 20,236,358	-	6	108	70.33	-1.76	0.54	0.914098
7555	3R_DroMel_CAF1	20,238,959 – 20,239,109	- - - - - - - - -	12193	20,238,959 – 20,239,053	-	5	96	94.71	-1.15	1.00	0.834121
				12194	20,238,987 – 20,239,093	+	5	106	97.74	-1.13	0.96	0.553692
				12195	20,238,987 – 20,239,093	-	5	106	97.74	-2.28	0.99	0.999606
				12196	20,239,019 – 20,239,109	+	5	90	97.33	-1.87	0.94	0.994221
				12197	20,239,019 – 20,239,109	-	5	90	97.33	-3.10	0.99	0.999968
7556	3R_DroMel_CAF1	20,245,596 – 20,245,715	- - - - - - - - -	12198	20,245,596 – 20,245,715	+	6	119	83.71	-1.71	0.75	0.584849
7557	3R_DroMel_CAF1	20,250,544 – 20,250,638	- - - - - - - - -	12199	20,250,544 – 20,250,638	-	5	94	96.49	-2.04	0.88	0.988019
7558	3R_DroMel_CAF1	20,255,136 – 20,255,227	- - - - - - - - -	12200	20,255,136 – 20,255,227	-	6	115	77.81	-1.84	0.55	0.703869
7559	3R_DroMel_CAF1	20,257,752 – 20,257,842	- - - - - - - - -	12201	20,257,752 – 20,257,842	-	6	108	74.81	-3.06	0.41	0.994791
7560	3R_DroMel_CAF1	20,259,568 – 20,259,663	- - - - - - - - -	12202	20,259,568 – 20,259,663	+	5	111	88.85	-3.09	0.90	0.999874
7560	3R_DroMel_CAF1	20,259,568 – 20,259,663	- - - - - - - - -	12203	20,259,568 – 20,259,663	-	5	111	88.85	-1.53	0.74	0.508905
7561	3R_DroMel_CAF1	20,262,325 – 20,262,429	- - - - - - - - -	12204	20,262,325 – 20,262,429	-	6	113	77.09	-2.03	0.64	0.948412
7562	3R_DroMel_CAF1	20,267,410 – 20,267,545	- - - - - - - - -	12205	20,267,410 – 20,267,521	+	6	114	78.77	-1.52	0.82	0.878969
7562	3R_DroMel_CAF1	20,267,410 – 20,267,545	- - - - - - - - -	12206	20,267,447 – 20,267,545	+	6	120	79.28	-2.48	0.62	0.944793
7563	3R_DroMel_CAF1	20,277,894 – 20,278,061	- - - - - - - - -	12207	20,277,894 – 20,278,008	+	6	120	88.27	-3.84	0.85	0.994134
				12208	20,277,894 – 20,278,008	-	6	120	88.27	-2.40	0.80	0.730506
				12209	20,277,928 – 20,278,047	+	6	119	87.88	-2.80	0.80	0.871150
				12210	20,277,928 – 20,278,047	-	6	119	87.88	-2.92	0.83	0.953942
				12211	20,277,968 – 20,278,061	+	6	112	76.13	-1.95	0.84	0.975258
				12212	20,277,968 – 20,278,061	-	6	112	76.13	-1.79	0.79	0.968760
7564	3R_DroMel_CAF1	20,279,475 – 20,279,573	- - - - - - - - -	12213	20,279,475 – 20,279,573	+	5	111	82.03	-3.05	0.51	0.965643
7564	3R_DroMel_CAF1	20,279,475 – 20,279,573	- - - - - - - - -	12214	20,279,475 – 20,279,573	-	5	111	82.03	-2.16	0.48	0.525635
7565	3R_DroMel_CAF1	20,283,068 – 20,283,170	- - - - - - - - -	12215	20,283,068 – 20,283,170	+	5	103	80.62	-2.55	0.46	0.907554
7566	3R_DroMel_CAF1	20,284,296 – 20,284,392	- - - - - - - - -	12216	20,284,296 – 20,284,392	+	6	102	77.19	-2.70	0.36	0.860601
7567	3R_DroMel_CAF1	20,289,678 – 20,289,789	- - - - - - - - -	12217	20,289,678 – 20,289,789	+	5	114	91.67	-1.35	0.80	0.500000
7567	3R_DroMel_CAF1	20,289,678 – 20,289,789	- - - - - - - - -	12218	20,289,678 – 20,289,789	-	5	114	91.67	-1.51	0.87	0.873901
7568	3R_DroMel_CAF1	20,290,492 – 20,290,593	- - - - - - - - -	12219	20,290,492 – 20,290,593	+	6	109	82.67	-1.68	0.65	0.500000
7569	3R_DroMel_CAF1	20,296,846 – 20,296,949	- - - - - - - - -	12220	20,296,846 – 20,296,949	+	6	107	81.07	-1.17	0.72	0.514963
7570	3R_DroMel_CAF1	20,298,172 – 20,298,263	- - - - - - - - -	12221	20,298,172 – 20,298,263	+	6	105	79.21	-1.11	0.74	0.611890
7570	3R_DroMel_CAF1	20,298,172 – 20,298,263	- - - - - - - - -	12222	20,298,172 – 20,298,263	-	6	105	79.21	-1.03	0.80	0.606800
7571	3R_DroMel_CAF1	20,298,486 – 20,298,578	- - - - - - - - -	12223	20,298,486 – 20,298,578	+	6	98	77.79	-2.08	0.76	0.964920
7571	3R_DroMel_CAF1	20,298,486 – 20,298,578	- - - - - - - - -	12224	20,298,486 – 20,298,578	-	6	98	77.79	-1.52	0.69	0.855449
7572	3R_DroMel_CAF1	20,302,829 – 20,302,932	- - - - - - - - -	12225	20,302,829 – 20,302,932	+	4	108	82.79	-2.29	0.75	0.957955
7572	3R_DroMel_CAF1	20,302,829 – 20,302,932	- - - - - - - - -	12226	20,302,829 – 20,302,932	-	4	108	82.79	-2.16	0.71	0.916630
7573	3R_DroMel_CAF1	20,304,408 – 20,304,506	- - - - - - - - -	12227	20,304,408 – 20,304,506	+	6	99	76.12	-1.99	0.47	0.712053
7573	3R_DroMel_CAF1	20,304,408 – 20,304,506	- - - - - - - - -	12228	20,304,408 – 20,304,506	-	6	99	76.12	-2.04	0.44	0.647751
7574	3R_DroMel_CAF1	20,306,069 – 20,306,166	- - - - - - - - -	12229	20,306,069 – 20,306,166	-	6	97	94.00	-1.59	0.95	0.991397
7575	3R_DroMel_CAF1	20,306,283 – 20,306,376	- - - - - - - - -	12230	20,306,283 – 20,306,376	+	6	105	74.21	-2.01	0.68	0.983151
7576	3R_DroMel_CAF1	20,311,552 – 20,311,644	- - - - - - - - -	12231	20,311,552 – 20,311,644	+	6	103	82.44	-2.22	0.68	0.757303
7577	3R_DroMel_CAF1	20,312,759 – 20,312,849	- - - - - - - - -	12232	20,312,759 – 20,312,849	-	4	91	75.64	-1.96	0.56	0.762690
7578	3R_DroMel_CAF1	20,313,387 – 20,313,483	- - - - - - - - -	12233	20,313,387 – 20,313,483	+	6	104	76.95	-1.02	0.73	0.658230
7579	3R_DroMel_CAF1	20,314,303 – 20,314,404	- - - - - - - - -	12234	20,314,303 – 20,314,404	+	6	113	79.46	-1.77	0.74	0.889347
7580	3R_DroMel_CAF1	20,316,485 – 20,316,593	- - - - - - - - -	12235	20,316,485 – 20,316,593	+	6	115	70.77	-0.78	0.75	0.756826
7581	3R_DroMel_CAF1	20,317,649 – 20,317,744	- - - - - - - - -	12236	20,317,649 – 20,317,744	+	5	99	78.09	-2.26	0.46	0.912516
7581	3R_DroMel_CAF1	20,317,649 – 20,317,744	- - - - - - - - -	12237	20,317,649 – 20,317,744	-	5	99	78.09	-1.88	0.54	0.677832
7582	3R_DroMel_CAF1	20,319,576 – 20,319,669	- - - - - - - - -	12238	20,319,576 – 20,319,669	-	3	101	84.44	-1.92	0.68	0.551527
7583	3R_DroMel_CAF1	20,320,060 – 20,320,168	- - - - - - - - -	12239	20,320,060 – 20,320,168	+	4	109	63.55	-3.02	0.48	0.998667
7584	3R_DroMel_CAF1	20,329,393 – 20,329,495	- - - - - - - - -	12240	20,329,393 – 20,329,495	-	6	111	77.43	-2.42	0.45	0.880120
7585	3R_DroMel_CAF1	20,334,656 – 20,334,767	- - - - - - - - -	12241	20,334,656 – 20,334,767	+	6	114	78.61	-1.66	0.60	0.683127
7586	3R_DroMel_CAF1	20,338,670 – 20,338,776	- - - - - - - - -	12242	20,338,670 – 20,338,776	+	6	117	74.79	-4.96	0.62	0.992588
7586	3R_DroMel_CAF1	20,338,670 – 20,338,776	- - - - - - - - -	12243	20,338,670 – 20,338,776	-	6	117	74.79	-5.47	0.65	0.979344
7587	3R_DroMel_CAF1	20,339,463 – 20,339,564	- - - "knownCDS=Parent=FBtr0084681;Name=nAcRbeta-96A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6798-RA" - - - - -	12244	20,339,463 – 20,339,564	-	6	104	84.77	-1.53	0.83	0.542091
7588	3R_DroMel_CAF1	20,340,191 – 20,340,290	- - - "knownCDS=Parent=FBtr0084681, FBtr0084682;Name=nAcRbeta-96A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6798-RA, FlyBase+Annotation+IDs:CG6798-RB" - - - - -	12245	20,340,191 – 20,340,290	+	6	111	75.91	-1.79	0.50	0.588189
7589	3R_DroMel_CAF1	20,345,351 – 20,345,471	- - - "knownCDS=Parent=FBtr0084642;Name=Pp1alpha-96A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6593-RA" - - - - -	12246	20,345,351 – 20,345,471	+	6	120	83.33	-1.73	0.70	0.554636
7590	3R_DroMel_CAF1	20,348,807 – 20,348,977	- - "RNAmicro=f:20348872_t:20348976_strand:+_p:0.855061" "knownCDS=Parent=FBtr0084680;Name=CG13622-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13622-RA" - - - - -	12247	20,348,807 – 20,348,897	-	6	90	89.93	-2.62	0.84	0.940155
7590	3R_DroMel_CAF1	20,348,807 – 20,348,977		12248	20,348,872 – 20,348,977	+	6	105	86.16	-2.50	0.76	0.666120
7591	3R_DroMel_CAF1	20,349,435 – 20,349,560	- - - - - - - - -	12249	20,349,435 – 20,349,530	+	6	108	76.78	-2.33	0.48	0.914182
				12250	20,349,435 – 20,349,530	-	6	108	76.78	-2.85	0.55	0.991005
				12251	20,349,457 – 20,349,560	+	6	110	81.20	-2.05	0.59	0.677794
7592	3R_DroMel_CAF1	20,351,869 – 20,351,969	- - - - - - - - -	12252	20,351,869 – 20,351,969	-	5	102	87.02	-1.58	0.77	0.602327
7593	3R_DroMel_CAF1	20,352,119 – 20,352,210	- - - - - - - - -	12253	20,352,119 – 20,352,210	-	6	95	75.78	-1.80	0.52	0.723741
7594	3R_DroMel_CAF1	20,360,553 – 20,360,673	- - - "knownCDS=Parent=FBtr0084646;Name=CG6631-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6631-RB" - - - - -	12254	20,360,553 – 20,360,673	+	6	120	77.56	-1.78	0.60	0.823077
7595	3R_DroMel_CAF1	20,361,729 – 20,361,819	- - - "knownCDS=Parent=FBtr0084646;Name=CG6631-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6631-RB" - - - - -	12255	20,361,729 – 20,361,819	+	6	91	77.34	-1.67	0.60	0.779678
7596	3R_DroMel_CAF1	20,364,583 – 20,364,673	- - - "knownCDS=Parent=FBtr0089906;Name=CG5789-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5789-RA" - - - - -	12256	20,364,583 – 20,364,673	+	6	97	80.04	-1.40	0.63	0.500000
7597	3R_DroMel_CAF1	20,366,655 – 20,366,801	- - - "knownCDS=Parent=FBtr0089906;Name=CG5789-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5789-RA" - - - - -	12257	20,366,655 – 20,366,764	-	6	111	78.78	-1.72	0.56	0.579378
7597	3R_DroMel_CAF1	20,366,655 – 20,366,801		12258	20,366,695 – 20,366,801	-	6	109	80.30	-1.30	0.67	0.537938
7598	3R_DroMel_CAF1	20,367,201 – 20,367,296	- - - - - - - - -	12259	20,367,201 – 20,367,296	+	6	106	87.64	-2.81	0.76	0.671025
7599	3R_DroMel_CAF1	20,371,125 – 20,371,233	- - - - - - - - -	12260	20,371,125 – 20,371,233	-	6	108	79.66	-1.80	0.69	0.852207
7600	3R_DroMel_CAF1	20,374,043 – 20,374,158	- - - - - - - - -	12261	20,374,043 – 20,374,158	-	4	120	87.94	-1.74	0.66	0.544512
7601	3R_DroMel_CAF1	20,378,284 – 20,378,404	- - - "knownCDS=Parent=FBtr0084648;Name=CG6643-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6643-RB" - - - - -	12262	20,378,284 – 20,378,404	-	6	120	79.22	-1.24	0.77	0.729918
7602	3R_DroMel_CAF1	20,381,006 – 20,381,118	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000258;Name=Dmel_Asp_GTC_14000258;TFAMID=DmelDGTC-20381024" "tRNAscan=type:Asp:anticodon:GTC f:20381023_t:20381111_strand=+_cove=75.34" - - "Rfam=AE003622.4/14248-14177_RF00005;tRNA;\|8e-35" - - - "Flybase=FBgn0011844:transfer_RNA:asp2:69F:cytosolic_tRNA_gene\|1e-36"	12263	20,381,006 – 20,381,118	-	5	114	92.54	-1.41	0.91	0.908943
7603	3R_DroMel_CAF1	20,386,246 – 20,386,385	- - - "knownCDS=Parent=FBtr0084673;Name=CG13624-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13624-RD" - - - - -	12264	20,386,246 – 20,386,345	-	6	104	81.43	-2.34	0.70	0.876596
7603	3R_DroMel_CAF1	20,386,246 – 20,386,385		12265	20,386,274 – 20,386,385	+	6	120	79.70	-1.79	0.65	0.802921
7604	3R_DroMel_CAF1	20,391,886 – 20,391,983	- - - - - - - - -	12266	20,391,886 – 20,391,983	-	3	103	77.40	-2.94	0.56	0.984659
7605	3R_DroMel_CAF1	20,392,704 – 20,392,859	- - - - - - - - -	12267	20,392,704 – 20,392,819	+	5	118	79.90	-1.61	0.65	0.561613
7605	3R_DroMel_CAF1	20,392,704 – 20,392,859	- - - - - - - - -	12268	20,392,740 – 20,392,859	+	5	120	73.22	-1.93	0.48	0.868969
7606	3R_DroMel_CAF1	20,400,534 – 20,400,630	- - - - - - - - -	12269	20,400,534 – 20,400,630	-	6	100	81.83	-1.61	0.63	0.506126
7607	3R_DroMel_CAF1	20,402,570 – 20,402,694	- - - - - - - - -	12270	20,402,570 – 20,402,661	+	6	107	76.12	-2.23	0.43	0.813746
				12271	20,402,599 – 20,402,694	+	6	108	71.40	-2.73	0.27	0.967923
				12272	20,402,599 – 20,402,694	-	6	108	71.40	-3.29	0.17	0.954951
7608	3R_DroMel_CAF1	20,404,208 – 20,404,391	- - - - - - - - -	12273	20,404,208 – 20,404,316	-	5	109	95.02	-1.93	0.83	0.942675
				12274	20,404,243 – 20,404,354	+	5	111	94.23	-2.02	0.87	0.992496
				12275	20,404,243 – 20,404,354	-	5	111	94.23	-2.47	0.94	0.999889
				12276	20,404,276 – 20,404,391	-	5	116	95.15	-1.32	0.90	0.818020
7609	3R_DroMel_CAF1	20,404,785 – 20,404,896	- - - - - - - - -	12277	20,404,785 – 20,404,896	-	6	115	80.06	-1.78	0.57	0.582661
7610	3R_DroMel_CAF1	20,407,860 – 20,407,984	- - - - - - - - -	12278	20,407,860 – 20,407,957	+	5	97	95.03	-3.56	1.00	0.999995
				12279	20,407,860 – 20,407,957	-	5	97	95.03	-1.89	0.94	0.997668
				12280	20,407,880 – 20,407,984	+	5	104	94.40	-1.93	0.96	0.998998
7611	3R_DroMel_CAF1	20,410,132 – 20,410,272	- - - "knownCDS=Parent=FBtr0084671;Name=CG13625-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13625-RA" - - - - -	12281	20,410,132 – 20,410,249	+	6	117	76.41	-1.91	0.52	0.783799
7611	3R_DroMel_CAF1	20,410,132 – 20,410,272		12282	20,410,172 – 20,410,272	-	6	117	73.88	-1.92	0.41	0.595492
7612	3R_DroMel_CAF1	20,414,362 – 20,414,480	- - - - - - - - -	12283	20,414,362 – 20,414,480	+	5	120	94.17	-1.96	0.95	0.998969
7613	3R_DroMel_CAF1	20,415,435 – 20,415,672	- - - - - - - - -	12284	20,415,435 – 20,415,539	+	5	104	95.00	-1.26	0.92	0.799432
				12285	20,415,539 – 20,415,647	+	5	118	89.17	-1.51	0.77	0.574449
				12286	20,415,573 – 20,415,672	+	5	120	83.52	-1.61	0.81	0.653988
7614	3R_DroMel_CAF1	20,417,441 – 20,417,561	- - - - - - - - -	12287	20,417,441 – 20,417,561	-	5	120	91.09	-1.90	0.75	0.728510
7615	3R_DroMel_CAF1	20,418,108 – 20,418,207	- - - - - - - - -	12288	20,418,108 – 20,418,207	+	5	107	85.63	-1.66	0.74	0.606997
7616	3R_DroMel_CAF1	20,418,950 – 20,419,097	- - - - - - - - -	12289	20,418,950 – 20,419,057	+	4	107	80.41	-1.36	0.88	0.650245
				12290	20,418,950 – 20,419,057	-	4	107	80.41	-2.17	0.78	0.964577
				12291	20,418,977 – 20,419,097	-	5	120	80.50	-1.38	0.78	0.532003
7617	3R_DroMel_CAF1	20,420,825 – 20,420,916	- - - - - - - - -	12292	20,420,825 – 20,420,916	+	6	110	73.19	-1.27	0.60	0.541002
7618	3R_DroMel_CAF1	20,423,438 – 20,423,528	- - - - - - - - -	12293	20,423,438 – 20,423,528	+	4	91	85.63	-1.51	0.67	0.525996
7619	3R_DroMel_CAF1	20,423,945 – 20,424,054	- - - - - - - - -	12294	20,423,945 – 20,424,054	+	5	120	86.28	-1.27	0.99	0.572519
7620	3R_DroMel_CAF1	20,424,868 – 20,425,004	- - - - - - - - -	12295	20,424,868 – 20,424,964	+	5	120	83.87	-2.20	0.61	0.715931
				12296	20,424,905 – 20,425,004	+	3	99	89.47	-1.98	0.89	0.805022
				12297	20,424,905 – 20,425,004	-	3	99	89.47	-1.92	0.84	0.628963
7621	3R_DroMel_CAF1	20,425,879 – 20,426,014	- - - - - - - - -	12298	20,425,879 – 20,425,980	+	4	114	74.19	-1.78	0.61	0.821188
7621	3R_DroMel_CAF1	20,425,879 – 20,426,014	- - - - - - - - -	12299	20,425,911 – 20,426,014	+	5	120	74.96	-3.92	0.57	0.999926
7622	3R_DroMel_CAF1	20,426,429 – 20,426,565	- - - - - - - - -	12300	20,426,429 – 20,426,525	+	5	103	89.21	-2.53	0.93	0.999674
				12301	20,426,429 – 20,426,525	-	5	103	89.21	-2.00	1.00	0.998678
				12302	20,426,462 – 20,426,565	+	5	103	93.91	-2.95	0.97	0.999990
				12303	20,426,462 – 20,426,565	-	5	103	93.91	-1.85	0.82	0.931451
7623	3R_DroMel_CAF1	20,426,992 – 20,427,089	- - - - - - - - -	12304	20,426,992 – 20,427,089	-	5	101	92.70	-1.98	0.78	0.880307
7624	3R_DroMel_CAF1	20,427,950 – 20,428,052	- - - - - - - - -	12305	20,427,950 – 20,428,052	-	5	120	86.03	-1.70	0.68	0.500000
7625	3R_DroMel_CAF1	20,434,234 – 20,434,368	- - - - - - - - -	12306	20,434,234 – 20,434,347	+	5	116	93.60	-1.51	0.86	0.869565
				12307	20,434,273 – 20,434,368	+	6	118	75.53	-1.97	0.61	0.952286
				12308	20,434,273 – 20,434,368	-	6	118	75.53	-1.75	0.53	0.705769
7626	3R_DroMel_CAF1	20,435,096 – 20,435,198	- - - - - - - - -	12309	20,435,096 – 20,435,198	+	5	112	73.83	-2.18	0.35	0.964580
7627	3R_DroMel_CAF1	20,435,901 – 20,436,032	- - - - - - - - -	12310	20,435,901 – 20,436,008	+	4	111	84.10	-2.03	0.85	0.927618
				12311	20,435,901 – 20,436,008	-	4	111	84.10	-2.12	0.61	0.701507
				12312	20,435,941 – 20,436,032	+	4	98	80.04	-2.41	0.75	0.987662
				12313	20,435,941 – 20,436,032	-	4	98	80.04	-2.24	0.63	0.926802
7628	3R_DroMel_CAF1	20,437,424 – 20,437,517	- - - - - - - - -	12314	20,437,424 – 20,437,517	+	4	94	85.84	-1.69	0.79	0.736159
7628	3R_DroMel_CAF1	20,437,424 – 20,437,517	- - - - - - - - -	12315	20,437,424 – 20,437,517	-	4	94	85.84	-1.96	0.68	0.758243
7629	3R_DroMel_CAF1	20,439,700 – 20,439,832	- - - - - - - - -	12316	20,439,700 – 20,439,806	-	5	119	74.39	-1.81	0.46	0.661056
7629	3R_DroMel_CAF1	20,439,700 – 20,439,832	- - - - - - - - -	12317	20,439,730 – 20,439,832	-	5	105	82.66	-1.95	0.68	0.776265
7630	3R_DroMel_CAF1	20,439,846 – 20,439,946	- - - - - - - - -	12318	20,439,846 – 20,439,946	-	6	105	77.22	-1.49	0.62	0.704415
7631	3R_DroMel_CAF1	20,443,318 – 20,443,432	- - - "knownCDS=Parent=FBtr0084655;Name=CG13620-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13620-RA" - - - - -	12319	20,443,318 – 20,443,416	+	6	104	81.82	-3.59	0.81	0.963493
				12320	20,443,318 – 20,443,416	-	6	104	81.82	-2.31	0.64	0.790145
				12321	20,443,336 – 20,443,432	+	6	104	85.95	-4.67	0.87	0.995166
				12322	20,443,336 – 20,443,432	-	6	104	85.95	-2.86	0.74	0.710968
7632	3R_DroMel_CAF1	20,445,395 – 20,445,486	- - - "knownCDS=Parent=FBtr0084655;Name=CG13620-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13620-RA" - - - - -	12323	20,445,395 – 20,445,486	-	6	108	70.04	-1.95	0.46	0.920739
7633	3R_DroMel_CAF1	20,446,337 – 20,446,466	- - - "knownCDS=Parent=FBtr0084655;Name=CG13620-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13620-RA" - - - - -	12324	20,446,337 – 20,446,431	+	6	100	82.43	-1.87	0.65	0.605801
7633	3R_DroMel_CAF1	20,446,337 – 20,446,466		12325	20,446,365 – 20,446,466	-	5	101	91.09	-1.38	0.80	0.551854
7634	3R_DroMel_CAF1	20,447,515 – 20,447,617	- - - - - - - - -	12326	20,447,515 – 20,447,617	-	5	114	91.62	-1.43	0.97	0.957837
7635	3R_DroMel_CAF1	20,451,860 – 20,451,978	- - - - - - - - -	12327	20,451,860 – 20,451,978	+	5	118	98.81	-1.30	0.95	0.663052
7636	3R_DroMel_CAF1	20,452,306 – 20,452,412	- - - - - - - - -	12328	20,452,306 – 20,452,412	+	5	106	97.55	-1.91	0.92	0.989806
7637	3R_DroMel_CAF1	20,452,602 – 20,452,722	- - - - - - - - -	12329	20,452,602 – 20,452,722	-	5	120	86.10	-1.92	0.64	0.512258
7638	3R_DroMel_CAF1	20,453,251 – 20,453,371	- - - "knownCDS=Parent=FBtr0084669;Name=Wsck-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31127-RA" - - - - -	12330	20,453,251 – 20,453,371	+	6	120	77.44	-1.79	0.52	0.564793
7639	3R_DroMel_CAF1	20,463,673 – 20,463,867	- - - "knownCDS=Parent=FBtr0084666;Name=CG5794-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5794-RB" - - - - -	12331	20,463,673 – 20,463,787	+	6	120	78.62	-1.64	0.60	0.661264
				12332	20,463,747 – 20,463,867	+	6	120	82.83	-1.81	0.74	0.680156
				12333	20,463,747 – 20,463,867	-	6	120	82.83	-1.80	0.68	0.586199
7640	3R_DroMel_CAF1	20,465,348 – 20,465,498	- - - "knownCDS=Parent=FBtr0084668;Name=CG5794-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5794-RD" - - - - -	12334	20,465,348 – 20,465,440	+	6	95	76.29	-0.83	0.77	0.628077
				12335	20,465,400 – 20,465,498	+	6	103	82.11	-1.27	0.72	0.500000
				12336	20,465,400 – 20,465,498	-	6	103	82.11	-1.48	0.73	0.606329
7641	3R_DroMel_CAF1	20,467,169 – 20,467,298	- - - "knownCDS=Parent=FBtr0084668;Name=CG5794-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5794-RD" - - - - -	12337	20,467,169 – 20,467,274	+	6	120	76.75	-1.16	0.72	0.760276
				12338	20,467,169 – 20,467,274	-	6	120	76.75	-2.25	0.78	0.980187
				12339	20,467,194 – 20,467,298	-	6	120	76.07	-2.03	0.65	0.967811
7642	3R_DroMel_CAF1	20,469,409 – 20,469,556	- - - "knownCDS=Parent=FBtr0084666, FBtr0084667;Name=CG5794-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5794-RB, FlyBase+Annotation+IDs:CG5794-RE" - - - - -	12340	20,469,409 – 20,469,527	+	6	118	80.17	-1.71	0.67	0.774207
7642	3R_DroMel_CAF1	20,469,409 – 20,469,556		12341	20,469,449 – 20,469,556	-	6	107	80.75	-1.47	0.63	0.531256
7643	3R_DroMel_CAF1	20,472,599 – 20,472,701	- - - "knownCDS=Parent=FBtr0084666, FBtr0084667;Name=CG5794-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5794-RB, FlyBase+Annotation+IDs:CG5794-RE" - - - - -	12342	20,472,599 – 20,472,701	-	6	108	81.69	-3.66	0.70	0.953866
7644	3R_DroMel_CAF1	20,472,827 – 20,472,933	- - - "knownCDS=Parent=FBtr0084666, FBtr0084667;Name=CG5794-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5794-RB, FlyBase+Annotation+IDs:CG5794-RE" - - - - -	12343	20,472,827 – 20,472,933	+	6	116	80.17	-1.72	0.59	0.597626
7645	3R_DroMel_CAF1	20,481,121 – 20,481,231	- - - "knownCDS=Parent=FBtr0089915, FBtr0089916;Name=CG6695-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6695-RB, FlyBase+Annotation+IDs:CG6695-RA" - - - - -	12344	20,481,121 – 20,481,231	-	6	120	71.80	-2.02	0.39	0.805343
7646	3R_DroMel_CAF1	20,482,879 – 20,482,969	- - - "knownCDS=Parent=FBtr0089915, FBtr0089916;Name=CG6695-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6695-RB, FlyBase+Annotation+IDs:CG6695-RA" - - - - -	12345	20,482,879 – 20,482,969	-	6	102	78.87	-1.78	0.59	0.730435
7647	3R_DroMel_CAF1	20,484,308 – 20,484,413	- - - - - - - - -	12346	20,484,308 – 20,484,413	+	6	114	78.89	-1.96	0.57	0.775479
7648	3R_DroMel_CAF1	20,491,572 – 20,491,666	- - - - - - - - -	12347	20,491,572 – 20,491,666	+	5	101	85.96	-2.12	0.79	0.928065
7649	3R_DroMel_CAF1	20,492,904 – 20,493,013	- - - - - - - - -	12348	20,492,904 – 20,493,013	-	6	109	78.96	-1.72	0.62	0.756212
7650	3R_DroMel_CAF1	20,495,430 – 20,495,550	- - - "knownCDS=Parent=FBtr0084683;Name=slo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10693-RB" - - - - -	12349	20,495,430 – 20,495,550	-	6	120	92.67	-1.87	0.84	0.721344
7651	3R_DroMel_CAF1	20,500,926 – 20,501,046	- - - "knownCDS=Parent=FBtr0100631;Name=slo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10693-RJ" - - - - -	12350	20,500,926 – 20,501,046	-	6	120	98.39	-0.95	0.94	0.668732
7652	3R_DroMel_CAF1	20,501,300 – 20,501,518	- - - "knownCDS=Parent=FBtr0100629;Name=slo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10693-RI" - - - - -	12351	20,501,300 – 20,501,398	+	6	120	75.03	-1.77	0.71	0.967206
				12352	20,501,300 – 20,501,398	-	6	120	75.03	-2.15	0.64	0.981914
				12353	20,501,358 – 20,501,478	+	6	120	99.11	-0.74	0.97	0.590284
				12354	20,501,398 – 20,501,518	+	6	120	97.28	-1.71	0.99	0.999087
7653	3R_DroMel_CAF1	20,512,931 – 20,513,046	- - - "knownCDS=Parent=FBtr0100631;Name=slo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10693-RJ" - - - - -	12355	20,512,931 – 20,513,046	-	6	120	78.92	-1.15	0.67	0.515467
7654	3R_DroMel_CAF1	20,513,515 – 20,513,634	- - - "knownCDS=Parent=FBtr0100624;Name=slo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10693-RF" - - - - -	12356	20,513,515 – 20,513,634	+	6	119	95.52	-2.17	0.93	0.998474
7655	3R_DroMel_CAF1	20,517,470 – 20,517,590	- - - "knownCDS=Parent=FBtr0100629;Name=slo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10693-RI" - - - - -	12357	20,517,470 – 20,517,590	+	6	120	78.75	-1.47	0.70	0.804334
7656	3R_DroMel_CAF1	20,518,228 – 20,518,328	- - "RNAmicro=f:20518228_t:20518344_strand:-_p:0.987055" - - - - - -	12358	20,518,228 – 20,518,328	+	6	117	72.79	-5.56	0.53	0.990798
7656	3R_DroMel_CAF1	20,518,228 – 20,518,328		12359	20,518,228 – 20,518,328	-	6	117	72.79	-4.50	0.59	0.996789
7657	3R_DroMel_CAF1	20,519,484 – 20,519,604	- - - "knownCDS=Parent=FBtr0100627;Name=slo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10693-RH" - - - - -	12360	20,519,484 – 20,519,604	-	6	120	99.56	-0.74	0.97	0.584288
7658	3R_DroMel_CAF1	20,524,922 – 20,525,016	- - - - - - - - -	12361	20,524,922 – 20,525,016	+	6	98	80.49	-2.95	0.41	0.725949
7659	3R_DroMel_CAF1	20,526,802 – 20,526,893	- - - - - - - - -	12362	20,526,802 – 20,526,893	+	6	111	76.38	-1.75	0.50	0.523234
7659	3R_DroMel_CAF1	20,526,802 – 20,526,893	- - - - - - - - -	12363	20,526,802 – 20,526,893	-	6	111	76.38	-2.41	0.61	0.983396
7660	3R_DroMel_CAF1	20,527,797 – 20,527,908	- - - "knownCDS=Parent=FBtr0100629;Name=slo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10693-RI" - - - - -	12364	20,527,797 – 20,527,908	+	6	120	86.20	-1.34	0.95	0.769218
7660	3R_DroMel_CAF1	20,527,797 – 20,527,908		12365	20,527,797 – 20,527,908	-	6	120	86.20	-1.32	0.89	0.500000
7661	3R_DroMel_CAF1	20,532,889 – 20,532,985	- - - - - - - - -	12366	20,532,889 – 20,532,985	-	6	103	75.45	-1.42	0.70	0.892626
7662	3R_DroMel_CAF1	20,536,580 – 20,536,679	- - - - - - - - -	12367	20,536,580 – 20,536,679	+	6	109	89.73	-1.46	1.00	0.983886
7663	3R_DroMel_CAF1	20,538,598 – 20,538,698	- - - - - - - - -	12368	20,538,598 – 20,538,698	+	6	120	80.60	-1.63	0.68	0.730337
7664	3R_DroMel_CAF1	20,541,564 – 20,541,656	- - - "knownCDS=Parent=FBtr0084686, FBtr0084687;Name=CG13627-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13627-RA, FlyBase+Annotation+IDs:CG13627-RB" - - - - -	12369	20,541,564 – 20,541,656	-	6	93	84.86	-1.57	0.81	0.522968
7665	3R_DroMel_CAF1	20,548,254 – 20,548,344	- - - - - - - - -	12370	20,548,254 – 20,548,344	-	6	100	78.84	-1.76	0.56	0.606041
7666	3R_DroMel_CAF1	20,548,431 – 20,548,527	- - - - - - - - -	12371	20,548,431 – 20,548,527	+	5	115	70.32	-1.71	0.23	0.556659
7667	3R_DroMel_CAF1	20,549,990 – 20,550,106	- - - - - - - - -	12372	20,549,990 – 20,550,106	+	4	118	81.05	-1.62	0.66	0.539934
7668	3R_DroMel_CAF1	20,551,400 – 20,551,491	- - - - - - - - -	12373	20,551,400 – 20,551,491	-	6	94	76.01	-2.24	0.53	0.946991
7669	3R_DroMel_CAF1	20,552,629 – 20,552,724	- - - - - - - - -	12374	20,552,629 – 20,552,724	+	6	112	83.64	-1.73	0.71	0.537060
7670	3R_DroMel_CAF1	20,554,468 – 20,554,569	- - - - - - - - -	12375	20,554,468 – 20,554,569	+	3	101	89.08	-1.93	0.87	0.729628
7671	3R_DroMel_CAF1	20,558,802 – 20,558,898	- - - - - - - - -	12376	20,558,802 – 20,558,898	+	3	101	84.23	-2.56	0.75	0.919476
7672	3R_DroMel_CAF1	20,559,612 – 20,559,722	- - - - - - - - -	12377	20,559,612 – 20,559,722	-	5	116	74.22	-1.48	0.09	0.678645
7673	3R_DroMel_CAF1	20,560,820 – 20,560,916	- - - - - - - - -	12378	20,560,820 – 20,560,916	+	6	112	81.62	-2.98	0.63	0.909226
7673	3R_DroMel_CAF1	20,560,820 – 20,560,916	- - - - - - - - -	12379	20,560,820 – 20,560,916	-	6	112	81.62	-2.67	0.63	0.864751
7674	3R_DroMel_CAF1	20,567,439 – 20,567,544	- - - - - - - - -	12380	20,567,439 – 20,567,544	+	6	120	76.09	-2.21	0.39	0.650547
7675	3R_DroMel_CAF1	20,568,444 – 20,568,535	- - - "knownCDS=Parent=FBtr0084689;Name=tok-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6863-RB" - - - - -	12381	20,568,444 – 20,568,535	-	6	110	73.01	-1.15	0.64	0.617028
7676	3R_DroMel_CAF1	20,582,875 – 20,582,995	- - - "knownCDS=Parent=FBtr0084692;Name=asp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6875-RA" - - - - -	12382	20,582,875 – 20,582,995	+	6	120	85.44	-2.20	0.76	0.620289
7676	3R_DroMel_CAF1	20,582,875 – 20,582,995		12383	20,582,875 – 20,582,995	-	6	120	85.44	-1.65	0.83	0.593615
7677	3R_DroMel_CAF1	20,584,134 – 20,584,253	- - - "knownCDS=Parent=FBtr0084692;Name=asp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6875-RA" - - - - -	12384	20,584,134 – 20,584,253	+	6	119	81.68	-1.79	0.67	0.680831
7678	3R_DroMel_CAF1	20,584,728 – 20,584,848	- - - "knownCDS=Parent=FBtr0084692;Name=asp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6875-RA" - - - - -	12385	20,584,728 – 20,584,848	+	6	120	73.00	-1.52	0.55	0.629154
7679	3R_DroMel_CAF1	20,594,761 – 20,594,892	- - - - - - - - -	12386	20,594,761 – 20,594,854	+	3	103	85.15	-1.90	0.72	0.570866
				12387	20,594,761 – 20,594,854	-	3	103	85.15	-2.23	0.70	0.713029
				12388	20,594,798 – 20,594,892	+	4	117	76.12	-2.02	0.58	0.855134
7680	3R_DroMel_CAF1	20,596,151 – 20,596,245	- - - - - - - - -	12389	20,596,151 – 20,596,245	+	6	115	73.85	-3.12	0.62	0.997359
7680	3R_DroMel_CAF1	20,596,151 – 20,596,245	- - - - - - - - -	12390	20,596,151 – 20,596,245	-	6	115	73.85	-2.53	0.63	0.994231
7681	3R_DroMel_CAF1	20,597,596 – 20,597,699	- - - - - - - - -	12391	20,597,596 – 20,597,699	+	6	111	79.83	-3.35	0.72	0.972787
7681	3R_DroMel_CAF1	20,597,596 – 20,597,699	- - - - - - - - -	12392	20,597,596 – 20,597,699	-	6	111	79.83	-2.55	0.70	0.951804
7682	3R_DroMel_CAF1	20,601,557 – 20,601,663	- - - "knownCDS=Parent=FBtr0084694;Name=CG13632-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13632-RA" - - - - -	12393	20,601,557 – 20,601,663	-	6	106	75.91	-1.73	0.68	0.942470
7683	3R_DroMel_CAF1	20,605,549 – 20,605,648	- - - - - - - - -	12394	20,605,549 – 20,605,648	+	6	106	80.50	-1.10	0.75	0.535126
7684	3R_DroMel_CAF1	20,607,635 – 20,607,739	- - - "knownCDS=Parent=FBtr0084695;Name=CG6879-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6879-RA" - - - - -	12395	20,607,635 – 20,607,739	+	6	107	80.76	-1.88	0.70	0.824668
7685	3R_DroMel_CAF1	20,613,689 – 20,613,782	- - - - - - - - -	12396	20,613,689 – 20,613,782	-	6	95	79.50	-1.69	0.58	0.570056
7686	3R_DroMel_CAF1	20,616,865 – 20,617,009	- - - - - - - - -	12397	20,616,865 – 20,616,969	+	6	108	84.52	-1.86	0.80	0.670495
7686	3R_DroMel_CAF1	20,616,865 – 20,617,009	- - - - - - - - -	12398	20,616,902 – 20,617,009	-	6	111	78.31	-1.49	0.66	0.764646
7687	3R_DroMel_CAF1	20,617,571 – 20,617,707	- - - - - - - - -	12399	20,617,571 – 20,617,673	+	4	103	81.71	-1.70	0.73	0.706987
				12400	20,617,571 – 20,617,673	-	4	103	81.71	-2.14	0.72	0.932465
				12401	20,617,594 – 20,617,707	-	4	116	76.28	-2.83	0.57	0.997043
7688	3R_DroMel_CAF1	20,619,222 – 20,619,312	- - - - - - - - -	12402	20,619,222 – 20,619,312	-	6	90	81.58	-1.32	0.73	0.570575
7689	3R_DroMel_CAF1	20,640,456 – 20,640,571	- - - - - - - - -	12403	20,640,456 – 20,640,571	+	6	115	77.57	-1.53	0.57	0.500000
7690	3R_DroMel_CAF1	20,641,180 – 20,641,390	- - - "knownCDS=Parent=FBtr0084738;Name=CG5808-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5808-RA" - - - - -	12404	20,641,180 – 20,641,270	-	5	93	91.18	-2.28	0.91	0.999068
				12405	20,641,214 – 20,641,310	+	4	99	69.70	-2.00	0.44	0.611641
				12406	20,641,214 – 20,641,310	-	4	99	69.70	-1.71	0.65	0.966118
				12407	20,641,243 – 20,641,350	-	5	110	90.55	-2.07	0.81	0.959980
				12408	20,641,270 – 20,641,390	-	5	120	89.56	-1.59	0.74	0.515135
7691	3R_DroMel_CAF1	20,643,637 – 20,643,751	- - - "knownCDS=Parent=FBtr0084700;Name=CG6995-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6995-RB" - - - - -	12409	20,643,637 – 20,643,751	-	6	114	81.64	-1.40	0.69	0.551130
7692	3R_DroMel_CAF1	20,655,935 – 20,656,037	- - - - - - - - -	12410	20,655,935 – 20,656,037	-	5	120	79.51	-2.13	0.71	0.947684
7693	3R_DroMel_CAF1	20,656,897 – 20,657,108	- - - - - - - - -	12411	20,656,897 – 20,656,988	+	5	117	83.93	-1.77	0.79	0.762446
				12412	20,656,908 – 20,657,028	+	5	120	94.58	-1.42	0.82	0.550799
				12413	20,656,948 – 20,657,068	-	5	120	97.17	-1.32	0.90	0.706883
				12414	20,656,988 – 20,657,108	-	5	120	93.99	-1.48	0.79	0.524466
7694	3R_DroMel_CAF1	20,658,311 – 20,658,430	- - - - - - - - -	12415	20,658,311 – 20,658,430	+	5	120	94.64	-1.49	0.84	0.769345
7695	3R_DroMel_CAF1	20,658,669 – 20,658,784	- - - - - - - - -	12416	20,658,669 – 20,658,784	-	4	115	83.70	-1.64	0.69	0.616386
7696	3R_DroMel_CAF1	20,660,419 – 20,660,537	- - - - - - - - -	12417	20,660,419 – 20,660,537	-	5	118	87.37	-1.51	0.82	0.634391
7697	3R_DroMel_CAF1	20,671,674 – 20,671,791	- - - - - - - - -	12418	20,671,674 – 20,671,791	+	5	117	74.42	-1.65	0.59	0.670859
7698	3R_DroMel_CAF1	20,673,978 – 20,674,098	- - - "knownCDS=Parent=FBtr0084703;Name=Esp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7005-RA" - - - - -	12419	20,673,978 – 20,674,098	-	6	120	80.61	-1.76	0.67	0.769108
7699	3R_DroMel_CAF1	20,677,314 – 20,677,428	- - - "knownCDS=Parent=FBtr0084705;Name=nct-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7012-RA" - - - - -	12420	20,677,314 – 20,677,428	+	3	114	94.74	-1.67	0.96	0.735235
7700	3R_DroMel_CAF1	20,679,198 – 20,679,298	- - - - - - - - -	12421	20,679,198 – 20,679,298	+	6	106	79.41	-1.31	0.66	0.592387
7701	3R_DroMel_CAF1	20,681,401 – 20,681,521	- - - "knownCDS=Parent=FBtr0084734;Name=CG31119-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31119-RA" - - - - -	12422	20,681,401 – 20,681,521	-	6	120	74.50	-1.08	0.74	0.836627
7702	3R_DroMel_CAF1	20,682,313 – 20,682,411	- - - "knownCDS=Parent=FBtr0084732;Name=CG10899-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10899-RA" - - - - -	12423	20,682,313 – 20,682,411	+	6	99	78.78	-1.97	0.57	0.795159
7703	3R_DroMel_CAF1	20,682,483 – 20,682,619	- - - "knownCDS=Parent=FBtr0084732;Name=CG10899-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10899-RA" - - - - -	12424	20,682,483 – 20,682,583	-	6	102	79.74	-1.26	0.66	0.511954
7703	3R_DroMel_CAF1	20,682,483 – 20,682,619		12425	20,682,521 – 20,682,619	-	6	100	81.08	-2.24	0.54	0.639253
7704	3R_DroMel_CAF1	20,698,239 – 20,698,355	- - - - - - - - -	12426	20,698,239 – 20,698,355	+	3	120	77.38	-1.95	0.60	0.788083
7704	3R_DroMel_CAF1	20,698,239 – 20,698,355	- - - - - - - - -	12427	20,698,239 – 20,698,355	-	3	120	77.38	-1.77	0.59	0.567416
7705	3R_DroMel_CAF1	20,701,137 – 20,701,294	- - - "knownCDS=Parent=FBtr0084726;Name=CG3744-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3744-RB" - - - - -	12428	20,701,137 – 20,701,254	+	6	117	79.37	-2.29	0.65	0.934744
				12429	20,701,137 – 20,701,254	-	6	117	79.37	-2.92	0.61	0.972098
				12430	20,701,174 – 20,701,294	+	6	120	80.83	-1.85	0.59	0.610033
				12431	20,701,174 – 20,701,294	-	6	120	80.83	-2.85	0.65	0.936915
7706	3R_DroMel_CAF1	20,706,681 – 20,706,780	- - - - - - - - -	12432	20,706,681 – 20,706,780	+	6	104	76.28	-0.76	0.75	0.523641
7707	3R_DroMel_CAF1	20,707,387 – 20,707,507	- - - "knownCDS=Parent=FBtr0084723;Name=CG31121-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31121-RA" - - - - -	12433	20,707,387 – 20,707,507	-	6	120	79.72	-2.04	0.52	0.604051
7708	3R_DroMel_CAF1	20,707,685 – 20,707,805	- - - "knownCDS=Parent=FBtr0084723;Name=CG31121-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31121-RA" - - - - -	12434	20,707,685 – 20,707,805	-	6	120	78.22	-1.32	0.65	0.594975
7709	3R_DroMel_CAF1	20,707,955 – 20,708,071	- - - "knownCDS=Parent=FBtr0084724;Name=CG31121-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31121-RB" - - - - -	12435	20,707,955 – 20,708,071	-	6	120	78.47	-1.38	0.61	0.500000
7710	3R_DroMel_CAF1	20,710,626 – 20,710,717	- - - - - - - - -	12436	20,710,626 – 20,710,717	+	5	97	82.15	-2.09	0.63	0.790940
7711	3R_DroMel_CAF1	20,712,295 – 20,712,460	- - - - - - - - -	12437	20,712,295 – 20,712,391	+	3	97	85.17	-2.40	0.68	0.755883
				12438	20,712,330 – 20,712,427	+	3	98	76.84	-2.42	0.60	0.976624
				12439	20,712,351 – 20,712,460	+	3	109	74.68	-2.89	0.47	0.834336
7712	3R_DroMel_CAF1	20,713,496 – 20,713,685	- - - - - - - - -	12440	20,713,496 – 20,713,587	+	6	93	80.81	-1.37	0.71	0.625406
				12441	20,713,559 – 20,713,652	+	6	105	83.64	-2.57	0.64	0.628187
				12442	20,713,559 – 20,713,652	-	6	105	83.64	-2.56	0.70	0.741022
				12443	20,713,587 – 20,713,685	-	6	105	81.46	-3.25	0.55	0.918855
7713	3R_DroMel_CAF1	20,715,388 – 20,715,499	- - - - - - - - -	12444	20,715,388 – 20,715,499	-	6	112	90.17	-2.62	0.77	0.512544
7714	3R_DroMel_CAF1	20,718,022 – 20,718,129	- - - - - - - - -	12445	20,718,022 – 20,718,129	+	6	113	74.58	-1.67	0.51	0.577132
7715	3R_DroMel_CAF1	20,718,750 – 20,718,845	- - - - - - - - -	12446	20,718,750 – 20,718,845	+	5	97	74.78	-2.05	0.44	0.903673
7716	3R_DroMel_CAF1	20,719,286 – 20,719,410	- - - - - - - - -	12447	20,719,286 – 20,719,393	-	5	109	88.29	-2.83	0.80	0.994472
7716	3R_DroMel_CAF1	20,719,286 – 20,719,410	- - - - - - - - -	12448	20,719,318 – 20,719,410	-	5	93	90.30	-2.47	0.81	0.989245
7717	3R_DroMel_CAF1	20,725,238 – 20,725,340	- - - "knownCDS=Parent=FBtr0084722;Name=CG13643-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13643-RA" - - - - -	12449	20,725,238 – 20,725,340	+	6	102	84.74	-2.27	0.69	0.500000
7718	3R_DroMel_CAF1	20,725,792 – 20,725,902	- - - "knownCDS=Parent=FBtr0084722;Name=CG13643-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13643-RA" - - - - -	12450	20,725,792 – 20,725,902	-	6	117	84.99	-2.34	0.70	0.500000
7719	3R_DroMel_CAF1	20,726,150 – 20,726,269	- - - - - - - - -	12451	20,726,150 – 20,726,269	+	6	120	81.59	-1.50	0.74	0.668991
7720	3R_DroMel_CAF1	20,727,381 – 20,727,481	- - - "knownCDS=Parent=FBtr0084713;Name=CG10845-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10845-RA" - - - - -	12452	20,727,381 – 20,727,481	-	6	105	84.26	-2.18	0.68	0.529738
7721	3R_DroMel_CAF1	20,729,970 – 20,730,062	- - - - - - - - -	12453	20,729,970 – 20,730,062	-	6	96	91.29	-2.16	0.81	0.643069
7722	3R_DroMel_CAF1	20,731,427 – 20,731,517	- - - - - - - - -	12454	20,731,427 – 20,731,517	+	6	112	78.59	-1.41	0.71	0.789404
7723	3R_DroMel_CAF1	20,732,192 – 20,732,292	- - - - - - - - -	12455	20,732,192 – 20,732,292	-	6	106	82.17	-2.05	0.67	0.726074
7724	3R_DroMel_CAF1	20,732,971 – 20,733,079	- - - - - - - - -	12456	20,732,971 – 20,733,079	+	6	119	62.78	-2.52	0.31	0.948032
7725	3R_DroMel_CAF1	20,734,934 – 20,735,026	- - - - - - - - -	12457	20,734,934 – 20,735,026	+	6	92	96.59	-1.22	0.89	0.644022
7725	3R_DroMel_CAF1	20,734,934 – 20,735,026	- - - - - - - - -	12458	20,734,934 – 20,735,026	-	6	92	96.59	-0.90	0.93	0.510398
7726	3R_DroMel_CAF1	20,735,099 – 20,735,189	- - - - - - - - -	12459	20,735,099 – 20,735,189	+	5	90	87.67	-2.52	0.63	0.600025
7727	3R_DroMel_CAF1	20,737,998 – 20,738,115	- - - - - - - - -	12460	20,737,998 – 20,738,095	-	6	100	81.18	-1.34	0.79	0.646331
7727	3R_DroMel_CAF1	20,737,998 – 20,738,115	- - - - - - - - -	12461	20,738,019 – 20,738,115	-	6	100	79.62	-1.54	0.71	0.786838
7728	3R_DroMel_CAF1	20,740,564 – 20,740,683	"known=exon_Parent=Dmel\CR_TRNA_ATT_14000259" - - - "Rfam=AE003622.4/14248-14177_RF00005;tRNA;\|2e-29" - - - "Flybase=FBgn0011844:transfer_RNA:asp2:69F:cytosolic_tRNA_gene\|3e-31"	12462	20,740,564 – 20,740,683	+	4	120	77.18	-2.31	0.76	0.993713
7728	3R_DroMel_CAF1	20,740,564 – 20,740,683		12463	20,740,564 – 20,740,683	-	4	120	77.18	-2.24	0.61	0.954115
7729	3R_DroMel_CAF1	20,749,323 – 20,749,420	- - - "knownCDS=Parent=FBtr0084717;Name=CG11120-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11120-RB" - - - - -	12464	20,749,323 – 20,749,420	-	5	103	83.89	-1.77	0.75	0.718736
7730	3R_DroMel_CAF1	20,749,858 – 20,749,963	- - - "knownCDS=Parent=FBtr0084717;Name=CG11120-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11120-RB" - - - - -	12465	20,749,858 – 20,749,963	-	6	118	79.70	-1.72	0.60	0.641180
7731	3R_DroMel_CAF1	20,757,646 – 20,757,745	- - - - - - - - -	12466	20,757,646 – 20,757,745	-	4	108	53.23	-1.32	0.41	0.617573
7732	3R_DroMel_CAF1	20,761,944 – 20,762,038	- - - - - - - - -	12467	20,761,944 – 20,762,038	+	6	94	81.28	-1.28	0.79	0.606270
7733	3R_DroMel_CAF1	20,762,626 – 20,762,801	- - - "knownCDS=Parent=FBtr0084801;Name=Osbp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6708-RA" - - - - -	12468	20,762,626 – 20,762,727	-	6	101	83.23	-2.02	0.72	0.669230
7733	3R_DroMel_CAF1	20,762,626 – 20,762,801		12469	20,762,697 – 20,762,801	-	6	104	83.72	-1.81	0.72	0.568307
7734	3R_DroMel_CAF1	20,768,049 – 20,768,144	- - - "knownCDS=Parent=FBtr0084799, FBtr0084800;Name=ssh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6238-RA, FlyBase+Annotation+IDs:CG6238-RB" - - - - -	12470	20,768,049 – 20,768,144	-	6	95	88.63	-2.08	0.92	0.980781
7735	3R_DroMel_CAF1	20,773,895 – 20,774,014	- - - "knownCDS=Parent=FBtr0084751;Name=CG13646-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13646-RA" - - - - -	12471	20,773,895 – 20,774,014	+	6	120	80.86	-1.35	0.70	0.603987
7736	3R_DroMel_CAF1	20,777,512 – 20,777,606	- - - - - - - - -	12472	20,777,512 – 20,777,606	+	6	113	74.31	-1.72	0.60	0.902851
7736	3R_DroMel_CAF1	20,777,512 – 20,777,606	- - - - - - - - -	12473	20,777,512 – 20,777,606	-	6	113	74.31	-1.93	0.50	0.848727
7737	3R_DroMel_CAF1	20,777,759 – 20,777,862	- - - - - - - - -	12474	20,777,759 – 20,777,862	-	5	112	74.86	-1.86	0.20	0.866740
7738	3R_DroMel_CAF1	20,778,669 – 20,778,774	- - - - - - - - -	12475	20,778,669 – 20,778,774	-	5	115	77.65	-1.41	0.70	0.572830
7739	3R_DroMel_CAF1	20,781,469 – 20,781,579	- - - - - - - - -	12476	20,781,469 – 20,781,579	+	4	116	73.56	-2.96	0.66	0.999906
7740	3R_DroMel_CAF1	20,781,978 – 20,782,075	- - - - - - - - -	12477	20,781,978 – 20,782,075	-	4	111	90.25	-2.09	0.91	0.968994
7741	3R_DroMel_CAF1	20,784,037 – 20,784,135	- - - - - - - - -	12478	20,784,037 – 20,784,135	-	6	104	87.10	-2.11	0.85	0.837829
7742	3R_DroMel_CAF1	20,784,244 – 20,784,423	- - - - - - - - -	12479	20,784,244 – 20,784,343	+	3	120	86.67	-1.47	0.88	0.591071
				12480	20,784,263 – 20,784,383	+	3	120	100.00	-1.53	1.00	0.686597
				12481	20,784,303 – 20,784,423	+	3	120	98.32	-1.51	0.98	0.591809
7743	3R_DroMel_CAF1	20,784,657 – 20,784,932	- - - - - - - - -	12482	20,784,657 – 20,784,772	+	3	120	95.00	-2.49	1.00	0.984664
				12483	20,784,772 – 20,784,892	-	3	120	98.33	-1.87	0.96	0.782064
				12484	20,784,812 – 20,784,932	+	3	120	97.21	-2.74	0.86	0.844425
				12485	20,784,812 – 20,784,932	-	3	120	97.21	-2.41	0.98	0.968055
7744	3R_DroMel_CAF1	20,785,473 – 20,785,830	- - - - - - - - -	12486	20,785,473 – 20,785,590	-	3	120	94.38	-2.48	0.96	0.969285
				12487	20,785,550 – 20,785,670	-	3	120	96.67	-1.77	0.94	0.676766
				12488	20,785,590 – 20,785,710	+	3	120	96.11	-1.51	0.95	0.544939
				12489	20,785,590 – 20,785,710	-	3	120	96.11	-2.42	0.93	0.929780
				12490	20,785,710 – 20,785,830	-	3	120	99.44	-1.68	1.00	0.772747
7745	3R_DroMel_CAF1	20,786,146 – 20,786,306	- - - - - - - - -	12491	20,786,146 – 20,786,266	-	3	120	97.22	-1.68	0.99	0.769687
7745	3R_DroMel_CAF1	20,786,146 – 20,786,306	- - - - - - - - -	12492	20,786,186 – 20,786,306	-	3	120	96.10	-3.33	1.00	0.995747
7746	3R_DroMel_CAF1	20,787,018 – 20,787,258	- - - - - - - - -	12493	20,787,018 – 20,787,138	+	3	120	100.00	-1.32	1.00	0.532284
7746	3R_DroMel_CAF1	20,787,018 – 20,787,258	- - - - - - - - -	12494	20,787,138 – 20,787,258	-	3	120	99.44	-2.45	0.97	0.951239
7747	3R_DroMel_CAF1	20,787,617 – 20,787,731	- - - - - - - - -	12495	20,787,617 – 20,787,731	+	4	120	95.97	-1.53	0.93	0.611817
7748	3R_DroMel_CAF1	20,788,075 – 20,788,190	- - - - - - - - -	12496	20,788,075 – 20,788,190	-	4	120	91.60	-1.60	0.81	0.630578
7749	3R_DroMel_CAF1	20,788,230 – 20,788,444	- - - - - - - - -	12497	20,788,230 – 20,788,326	+	4	120	85.65	-1.91	0.61	0.541135
				12498	20,788,230 – 20,788,326	-	4	120	85.65	-1.83	0.79	0.813063
				12499	20,788,270 – 20,788,364	+	3	94	96.45	-3.05	0.93	0.976675
				12500	20,788,270 – 20,788,364	-	3	94	96.45	-2.56	0.98	0.980176
				12501	20,788,326 – 20,788,444	+	3	118	93.22	-2.27	0.78	0.512517
7750	3R_DroMel_CAF1	20,788,724 – 20,789,032	- - - - - - - - -	12502	20,788,724 – 20,788,844	-	4	120	95.06	-1.41	0.92	0.538770
				12503	20,788,804 – 20,788,924	-	4	120	97.50	-2.10	0.91	0.819869
				12504	20,788,884 – 20,788,992	+	4	120	91.52	-2.56	0.90	0.988546
				12505	20,788,884 – 20,788,992	-	4	120	91.52	-2.58	0.83	0.962733
				12506	20,788,924 – 20,789,032	+	4	120	90.50	-1.86	0.77	0.740088
				12507	20,788,924 – 20,789,032	-	4	120	90.50	-3.29	0.82	0.983451
7751	3R_DroMel_CAF1	20,789,585 – 20,789,687	- - - - - - - - -	12508	20,789,585 – 20,789,687	+	4	102	96.24	-2.73	0.95	0.984262
7751	3R_DroMel_CAF1	20,789,585 – 20,789,687	- - - - - - - - -	12509	20,789,585 – 20,789,687	-	4	102	96.24	-3.21	0.96	0.989851
7752	3R_DroMel_CAF1	20,792,279 – 20,792,388	- - - - - - - - -	12510	20,792,279 – 20,792,388	+	5	113	77.01	-1.89	0.43	0.621872
7753	3R_DroMel_CAF1	20,796,678 – 20,796,816	- - - - - - - - -	12511	20,796,678 – 20,796,790	+	6	117	87.27	-1.93	0.79	0.519116
7753	3R_DroMel_CAF1	20,796,678 – 20,796,816	- - - - - - - - -	12512	20,796,713 – 20,796,816	+	6	104	94.90	-2.00	0.92	0.995809
7754	3R_DroMel_CAF1	20,796,821 – 20,796,954	- - - - - - - - -	12513	20,796,821 – 20,796,924	-	6	120	83.12	-1.40	0.80	0.537417
7754	3R_DroMel_CAF1	20,796,821 – 20,796,954	- - - - - - - - -	12514	20,796,847 – 20,796,954	+	6	120	82.76	-1.60	0.83	0.700782
7755	3R_DroMel_CAF1	20,799,783 – 20,799,886	- - - - - - - - -	12515	20,799,783 – 20,799,886	+	6	117	85.08	-1.79	0.77	0.533836
7756	3R_DroMel_CAF1	20,800,561 – 20,800,654	- - - - - - - - -	12516	20,800,561 – 20,800,654	+	5	93	75.18	-1.79	0.66	0.915367
7757	3R_DroMel_CAF1	20,800,694 – 20,800,800	- - - - - - - - -	12517	20,800,694 – 20,800,800	-	3	117	82.00	-2.12	0.91	0.985305
7758	3R_DroMel_CAF1	20,800,986 – 20,801,080	- - - - - - - - -	12518	20,800,986 – 20,801,080	+	6	104	79.08	-2.31	0.47	0.722867
7759	3R_DroMel_CAF1	20,801,505 – 20,801,599	- - - - - - - - -	12519	20,801,505 – 20,801,599	-	6	99	82.53	-1.77	0.63	0.500000
7760	3R_DroMel_CAF1	20,802,070 – 20,802,190	- - - - - - - - -	12520	20,802,070 – 20,802,190	-	5	120	92.17	-2.17	0.83	0.983544
7761	3R_DroMel_CAF1	20,802,325 – 20,802,419	- - - - - - - - -	12521	20,802,325 – 20,802,419	-	6	104	81.68	-1.27	0.74	0.545500
7762	3R_DroMel_CAF1	20,804,911 – 20,805,004	- - - - - - - - -	12522	20,804,911 – 20,805,004	-	6	101	79.45	-1.56	0.73	0.828727
7763	3R_DroMel_CAF1	20,805,347 – 20,805,444	- - - - - - - - -	12523	20,805,347 – 20,805,444	+	6	110	85.20	-2.27	0.76	0.647285
7764	3R_DroMel_CAF1	20,807,188 – 20,807,290	- - - - - - - - -	12524	20,807,188 – 20,807,290	+	6	120	80.86	-1.69	0.65	0.683722
7765	3R_DroMel_CAF1	20,807,454 – 20,807,585	- - - - - - - - -	12525	20,807,454 – 20,807,546	-	6	101	81.54	-1.61	0.74	0.721354
7765	3R_DroMel_CAF1	20,807,454 – 20,807,585	- - - - - - - - -	12526	20,807,483 – 20,807,585	-	5	109	94.75	-2.42	0.92	0.999736
7766	3R_DroMel_CAF1	20,810,356 – 20,810,447	- - - - - - - - -	12527	20,810,356 – 20,810,447	+	6	93	80.15	-2.80	0.48	0.871184
7766	3R_DroMel_CAF1	20,810,356 – 20,810,447	- - - - - - - - -	12528	20,810,356 – 20,810,447	-	6	93	80.15	-2.33	0.53	0.773043
7767	3R_DroMel_CAF1	20,811,196 – 20,811,293	- - - - - - - - -	12529	20,811,196 – 20,811,293	+	5	100	90.70	-1.57	0.85	0.853797
7768	3R_DroMel_CAF1	20,812,407 – 20,812,514	- - - - - - - - -	12530	20,812,407 – 20,812,514	-	6	109	79.90	-1.99	0.66	0.862790
7769	3R_DroMel_CAF1	20,812,677 – 20,812,772	- - - - - - - - -	12531	20,812,677 – 20,812,772	+	6	108	83.15	-2.61	0.62	0.664393
7769	3R_DroMel_CAF1	20,812,677 – 20,812,772	- - - - - - - - -	12532	20,812,677 – 20,812,772	-	6	108	83.15	-3.51	0.64	0.880646
7770	3R_DroMel_CAF1	20,813,686 – 20,813,790	- - - - - - - - -	12533	20,813,686 – 20,813,790	-	5	108	77.87	-2.18	0.34	0.873746
7771	3R_DroMel_CAF1	20,815,712 – 20,815,827	- - - - - - - - -	12534	20,815,712 – 20,815,827	-	5	115	90.87	-1.68	0.83	0.888571
7772	3R_DroMel_CAF1	20,817,129 – 20,817,221	- - - - - - - - -	12535	20,817,129 – 20,817,221	+	5	99	91.06	-1.73	0.79	0.791913
7772	3R_DroMel_CAF1	20,817,129 – 20,817,221	- - - - - - - - -	12536	20,817,129 – 20,817,221	-	5	99	91.06	-1.59	0.75	0.536037
7773	3R_DroMel_CAF1	20,817,540 – 20,817,632	- - - - - - - - -	12537	20,817,540 – 20,817,632	+	4	96	84.41	-2.26	0.57	0.571509
7774	3R_DroMel_CAF1	20,817,826 – 20,817,933	- - - - - - - - -	12538	20,817,826 – 20,817,933	+	6	116	80.33	-1.96	0.58	0.677661
7775	3R_DroMel_CAF1	20,818,753 – 20,818,857	- - - - - - - - -	12539	20,818,753 – 20,818,857	-	4	112	77.73	-2.22	0.59	0.923228
7776	3R_DroMel_CAF1	20,822,028 – 20,822,188	- - - - - - - - -	12540	20,822,028 – 20,822,123	+	5	102	78.32	-2.58	0.55	0.986943
				12541	20,822,056 – 20,822,148	+	5	92	78.37	-3.07	0.53	0.997869
				12542	20,822,089 – 20,822,188	+	6	105	74.43	-2.13	0.37	0.671554
7777	3R_DroMel_CAF1	20,830,165 – 20,830,259	- - - - - - - - -	12543	20,830,165 – 20,830,259	+	5	110	83.27	-1.79	0.67	0.626445
7778	3R_DroMel_CAF1	20,830,400 – 20,830,503	- - - - - - - - -	12544	20,830,400 – 20,830,503	+	4	105	72.17	-1.57	0.66	0.836914
7779	3R_DroMel_CAF1	20,835,037 – 20,835,140	- - - - - - - - -	12545	20,835,037 – 20,835,140	+	4	105	81.16	-2.81	0.61	0.979444
7779	3R_DroMel_CAF1	20,835,037 – 20,835,140	- - - - - - - - -	12546	20,835,037 – 20,835,140	-	4	105	81.16	-1.96	0.73	0.881549
7780	3R_DroMel_CAF1	20,837,459 – 20,837,549	- - - "knownCDS=Parent=FBtr0084754;Name=tnc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13648-RA" - - - - -	12547	20,837,459 – 20,837,549	+	6	91	75.87	-2.62	0.43	0.966946
7781	3R_DroMel_CAF1	20,842,292 – 20,842,426	- - - "knownCDS=Parent=FBtr0084754;Name=tnc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13648-RA" - - - - -	12548	20,842,292 – 20,842,386	-	4	94	89.36	-3.22	0.82	0.987646
7781	3R_DroMel_CAF1	20,842,292 – 20,842,426		12549	20,842,323 – 20,842,426	-	4	103	84.14	-2.38	0.75	0.956341
7782	3R_DroMel_CAF1	20,843,320 – 20,843,436	- - - "knownCDS=Parent=FBtr0084754;Name=tnc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13648-RA" - - - - -	12550	20,843,320 – 20,843,436	+	4	116	86.93	-1.74	0.67	0.589795
7783	3R_DroMel_CAF1	20,845,317 – 20,845,437	- - - "knownCDS=Parent=FBtr0084754;Name=tnc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13648-RA" - - - - -	12551	20,845,317 – 20,845,437	-	5	120	86.25	-2.00	0.69	0.687079
7784	3R_DroMel_CAF1	20,845,517 – 20,845,615	- - - "knownCDS=Parent=FBtr0084754;Name=tnc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13648-RA" - - - - -	12552	20,845,517 – 20,845,615	-	4	101	91.62	-2.50	0.70	0.587236
7785	3R_DroMel_CAF1	20,846,569 – 20,846,689	- - - "knownCDS=Parent=FBtr0084754;Name=tnc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13648-RA" - - - - -	12553	20,846,569 – 20,846,689	-	6	120	87.89	-1.62	0.83	0.505158
7786	3R_DroMel_CAF1	20,848,188 – 20,848,287	- - - - - - - - -	12554	20,848,188 – 20,848,287	+	6	103	79.45	-2.03	0.50	0.533833
7787	3R_DroMel_CAF1	20,850,689 – 20,850,802	- - - - - - - - -	12555	20,850,689 – 20,850,802	-	5	114	82.49	-2.03	0.64	0.764978
7788	3R_DroMel_CAF1	20,857,070 – 20,857,181	- - - "knownCDS=Parent=FBtr0084796;Name=Smg6-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6369-RA" - - - - -	12556	20,857,070 – 20,857,181	+	6	111	85.11	-2.73	0.68	0.559735
7789	3R_DroMel_CAF1	20,861,616 – 20,861,710	- - "RNAmicro=f:20861616_t:20861712_strand:+_p:0.998805" "knownCDS=Parent=FBtr0084795;Name=CG6422-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6422-RB" - - - - -	12557	20,861,616 – 20,861,710	+	6	97	84.84	-3.45	0.77	0.920129
7790	3R_DroMel_CAF1	20,870,494 – 20,870,619	- - - - - - - - -	12558	20,870,494 – 20,870,598	+	5	104	94.80	-1.38	0.89	0.832756
				12559	20,870,529 – 20,870,619	+	5	90	96.00	-2.58	0.89	0.999244
				12560	20,870,529 – 20,870,619	-	5	90	96.00	-2.16	0.96	0.999522
7791	3R_DroMel_CAF1	20,872,418 – 20,872,615	- - - "knownCDS=Parent=FBtr0084759;Name=CG11786-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11786-RA" - - - - -	12561	20,872,418 – 20,872,535	+	6	120	78.00	-1.36	0.70	0.779152
				12562	20,872,418 – 20,872,535	-	6	120	78.00	-1.48	0.67	0.798081
				12563	20,872,495 – 20,872,615	-	5	120	96.42	-2.02	0.93	0.997885
7792	3R_DroMel_CAF1	20,873,298 – 20,873,625	- - - "knownCDS=Parent=FBtr0084760;Name=CG11790-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11790-RA" - - - - -	12564	20,873,298 – 20,873,404	+	5	120	80.00	-1.86	0.66	0.793060
				12565	20,873,298 – 20,873,404	-	5	120	80.00	-1.86	0.69	0.830390
				12566	20,873,364 – 20,873,484	+	5	120	89.25	-1.99	0.69	0.546112
				12567	20,873,364 – 20,873,484	-	5	120	89.25	-2.32	0.71	0.774832
				12568	20,873,484 – 20,873,585	+	6	101	79.74	-1.94	0.64	0.836983
				12569	20,873,521 – 20,873,625	-	6	104	87.50	-2.93	0.73	0.552249
7793	3R_DroMel_CAF1	20,875,400 – 20,875,553	- - - - - - - - -	12570	20,875,400 – 20,875,516	+	3	116	97.70	-2.29	0.95	0.925600
				12571	20,875,400 – 20,875,516	-	3	116	97.70	-1.61	0.95	0.594642
				12572	20,875,440 – 20,875,553	+	3	113	98.23	-1.85	0.99	0.853911
7794	3R_DroMel_CAF1	20,876,713 – 20,876,814	- - - - - - - - -	12573	20,876,713 – 20,876,814	+	3	116	81.33	-2.01	0.73	0.858039
7795	3R_DroMel_CAF1	20,891,221 – 20,891,337	- - - - - - - - -	12574	20,891,221 – 20,891,337	-	5	117	90.98	-1.70	0.80	0.820382
7796	3R_DroMel_CAF1	20,891,979 – 20,892,099	- - - "knownCDS=Parent=FBtr0084765;Name=CG11820-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11820-RA" - - - - -	12575	20,891,979 – 20,892,099	-	6	120	89.39	-1.82	0.87	0.848003
7797	3R_DroMel_CAF1	20,892,607 – 20,892,715	- - - - - - - - -	12576	20,892,607 – 20,892,715	+	5	111	90.93	-1.86	0.71	0.516253
7798	3R_DroMel_CAF1	20,896,172 – 20,896,292	- - - "knownCDS=Parent=FBtr0084766;Name=CG11839-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11839-RA" - - - - -	12577	20,896,172 – 20,896,292	-	4	120	90.00	-1.93	0.83	0.878026
7799	3R_DroMel_CAF1	20,898,090 – 20,898,250	- - - "knownCDS=Parent=FBtr0084767, FBtr0084768;Name=CG11836-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11836-RB, FlyBase+Annotation+IDs:CG11836-RA" - - - - -	12578	20,898,090 – 20,898,210	+	5	120	84.42	-1.82	0.65	0.555427
7799	3R_DroMel_CAF1	20,898,090 – 20,898,250		12579	20,898,130 – 20,898,250	+	5	120	87.67	-1.77	0.77	0.751166
7800	3R_DroMel_CAF1	20,899,547 – 20,899,659	- - - "knownCDS=Parent=FBtr0084785;Name=CG9996-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9996-RA" - - - - -	12580	20,899,547 – 20,899,659	-	6	119	77.73	-1.79	0.56	0.725179
7801	3R_DroMel_CAF1	20,911,986 – 20,912,106	- - - - - - - - -	12581	20,911,986 – 20,912,106	-	4	120	70.10	-1.85	0.59	0.957750
7802	3R_DroMel_CAF1	20,915,802 – 20,915,906	- - - - - - - - -	12582	20,915,802 – 20,915,906	+	4	114	93.73	-1.98	0.94	0.950697
7803	3R_DroMel_CAF1	20,918,131 – 20,918,247	- - - - - - - - -	12583	20,918,131 – 20,918,247	-	5	120	96.94	-1.34	0.87	0.601927
7804	3R_DroMel_CAF1	20,918,360 – 20,918,456	- - - - - - - - -	12584	20,918,360 – 20,918,456	+	4	100	89.77	-1.54	0.76	0.579203
7804	3R_DroMel_CAF1	20,918,360 – 20,918,456	- - - - - - - - -	12585	20,918,360 – 20,918,456	-	4	100	89.77	-2.00	0.75	0.771240
7805	3R_DroMel_CAF1	20,918,826 – 20,918,984	- - - - - - - - -	12586	20,918,826 – 20,918,944	+	5	120	89.98	-1.79	0.77	0.778291
7805	3R_DroMel_CAF1	20,918,826 – 20,918,984	- - - - - - - - -	12587	20,918,866 – 20,918,984	+	5	120	93.54	-1.65	0.87	0.954093
7806	3R_DroMel_CAF1	20,919,968 – 20,920,080	- - - - - - - - -	12588	20,919,968 – 20,920,080	-	5	112	96.07	-1.26	0.93	0.794628
7807	3R_DroMel_CAF1	20,920,199 – 20,920,303	- - - - - - - - -	12589	20,920,199 – 20,920,303	+	5	118	84.80	-2.90	0.48	0.576388
7807	3R_DroMel_CAF1	20,920,199 – 20,920,303	- - - - - - - - -	12590	20,920,199 – 20,920,303	-	5	118	84.80	-3.01	0.60	0.914181
7808	3R_DroMel_CAF1	20,923,313 – 20,923,433	- - - - - - - - -	12591	20,923,313 – 20,923,433	+	6	120	81.22	-1.58	0.63	0.541126
7809	3R_DroMel_CAF1	20,924,370 – 20,924,461	- - - "knownCDS=Parent=FBtr0089834;Name=CG33096-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33096-RB" - - - - -	12592	20,924,370 – 20,924,461	+	6	102	77.16	-0.89	0.76	0.616880
7810	3R_DroMel_CAF1	20,925,682 – 20,925,827	- - - - - - - - -	12593	20,925,682 – 20,925,793	-	6	114	76.13	-2.80	0.49	0.988855
				12594	20,925,722 – 20,925,827	+	6	105	81.78	-1.84	0.76	0.795255
				12595	20,925,722 – 20,925,827	-	6	105	81.78	-1.95	0.61	0.620681
7811	3R_DroMel_CAF1	20,930,244 – 20,930,341	- - - "knownCDS=texon4039;Parent=CG_NCBI_GNO_32577364, CG_RGUI_GID_mRNA_40009412, CG_DGIL_SNO_28367305, CG_BATZ_CON_47010981" - - - - -	12596	20,930,244 – 20,930,341	-	6	120	78.22	-1.46	0.72	0.838032
7812	3R_DroMel_CAF1	20,931,357 – 20,931,470	- - - "knownCDS=Parent=FBtr0100082;Name=CG34027-cds, ;Dbxref=FlyBase+Annotation+IDs:CG34027-RA" - - - - -	12597	20,931,357 – 20,931,470	+	6	120	78.38	-2.51	0.53	0.940272
7812	3R_DroMel_CAF1	20,931,357 – 20,931,470		12598	20,931,357 – 20,931,470	-	6	120	78.38	-2.17	0.47	0.682380
7813	3R_DroMel_CAF1	20,938,313 – 20,938,459	- - - - - - - - -	12599	20,938,313 – 20,938,419	-	5	106	88.11	-1.80	0.74	0.690632
				12600	20,938,339 – 20,938,459	+	5	120	83.42	-2.42	0.69	0.932426
				12601	20,938,339 – 20,938,459	-	5	120	83.42	-2.50	0.68	0.939211
7814	3R_DroMel_CAF1	20,939,958 – 20,940,078	- - - "knownCDS=Parent=FBtr0084802;Name=CG31108-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31108-RA" - - - - -	12602	20,939,958 – 20,940,078	-	6	120	83.28	-2.34	0.61	0.551084
7815	3R_DroMel_CAF1	20,941,556 – 20,941,667	- - - "knownCDS=Parent=FBtr0084802;Name=CG31108-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31108-RA" - - - - -	12603	20,941,556 – 20,941,667	-	5	114	90.91	-1.62	0.79	0.728864
7816	3R_DroMel_CAF1	20,942,815 – 20,942,933	- - - - - - - - -	12604	20,942,815 – 20,942,933	+	5	120	90.18	-3.44	0.78	0.996022
7816	3R_DroMel_CAF1	20,942,815 – 20,942,933	- - - - - - - - -	12605	20,942,815 – 20,942,933	-	5	120	90.18	-2.98	0.78	0.993594
7817	3R_DroMel_CAF1	20,945,839 – 20,945,956	- - - "knownCDS=Parent=FBtr0084783;Name=CG31510-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31510-RA" - - - - -	12606	20,945,839 – 20,945,956	-	5	117	84.87	-2.24	0.64	0.744844
7818	3R_DroMel_CAF1	20,947,733 – 20,947,884	- - - - - - - - -	12607	20,947,733 – 20,947,845	-	6	120	82.24	-1.33	0.74	0.531768
7818	3R_DroMel_CAF1	20,947,733 – 20,947,884	- - - - - - - - -	12608	20,947,773 – 20,947,884	-	6	120	81.09	-2.03	0.73	0.856488
7819	3R_DroMel_CAF1	20,948,810 – 20,948,905	- - - - - - - - -	12609	20,948,810 – 20,948,905	+	3	99	83.28	-2.19	0.72	0.830334
7820	3R_DroMel_CAF1	20,949,894 – 20,949,991	- - - - - - - - -	12610	20,949,894 – 20,949,991	+	5	103	82.32	-1.90	0.62	0.640120
7821	3R_DroMel_CAF1	20,950,374 – 20,950,491	- - - "knownCDS=Parent=FBtr0084775, FBtr0084776;Name=CG11844-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11844-RB, FlyBase+Annotation+IDs:CG11844-RC" - - - - -	12611	20,950,374 – 20,950,491	+	6	117	88.89	-1.98	0.81	0.603199
7822	3R_DroMel_CAF1	20,958,332 – 20,958,449	- - - "knownCDS=Parent=FBtr0084779;Name=CG11848-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11848-RA" - - - - -	12612	20,958,332 – 20,958,449	+	6	120	81.63	-2.21	0.54	0.548896
7823	3R_DroMel_CAF1	20,960,902 – 20,961,000	- - - - - - - - -	12613	20,960,902 – 20,961,000	+	6	99	79.85	-1.40	0.63	0.533562
7824	3R_DroMel_CAF1	20,961,934 – 20,962,051	- - - - - - - - -	12614	20,961,934 – 20,962,051	+	6	117	97.55	-1.57	0.86	0.629295
7825	3R_DroMel_CAF1	20,964,234 – 20,964,354	- - - "knownCDS=Parent=FBtr0084780;Name=danr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13651-RA" - - - - -	12615	20,964,234 – 20,964,354	+	6	120	89.50	-2.63	0.80	0.768400
7826	3R_DroMel_CAF1	20,966,928 – 20,967,042	- - - - - - - - -	12616	20,966,928 – 20,967,042	-	5	118	85.30	-1.71	0.78	0.705024
7827	3R_DroMel_CAF1	20,973,624 – 20,973,715	- - - - - - - - -	12617	20,973,624 – 20,973,715	+	4	91	93.63	-3.72	0.90	0.989725
7827	3R_DroMel_CAF1	20,973,624 – 20,973,715	- - - - - - - - -	12618	20,973,624 – 20,973,715	-	4	91	93.63	-2.65	0.77	0.787549
7828	3R_DroMel_CAF1	20,975,658 – 20,975,753	- - - - - - - - -	12619	20,975,658 – 20,975,753	+	6	119	71.65	-3.18	0.54	0.998784
7828	3R_DroMel_CAF1	20,975,658 – 20,975,753	- - - - - - - - -	12620	20,975,658 – 20,975,753	-	6	119	71.65	-1.81	0.38	0.505793
7829	3R_DroMel_CAF1	20,978,845 – 20,978,940	- - - - - - - - -	12621	20,978,845 – 20,978,940	-	5	97	78.15	-1.68	0.59	0.524071
7830	3R_DroMel_CAF1	20,981,131 – 20,981,242	- - - - - - - - -	12622	20,981,131 – 20,981,242	+	6	116	69.23	-1.73	0.45	0.762278
7830	3R_DroMel_CAF1	20,981,131 – 20,981,242	- - - - - - - - -	12623	20,981,131 – 20,981,242	-	6	116	69.23	-1.96	0.40	0.874937
7831	3R_DroMel_CAF1	20,981,386 – 20,981,484	- - - - - - - - -	12624	20,981,386 – 20,981,484	-	6	105	79.93	-2.47	0.52	0.839787
7832	3R_DroMel_CAF1	20,983,999 – 20,984,115	- - - - - - - - -	12625	20,983,999 – 20,984,115	+	4	120	86.33	-1.96	0.73	0.817083
7833	3R_DroMel_CAF1	20,984,738 – 20,984,832	- - - - - - - - -	12626	20,984,738 – 20,984,832	+	6	120	77.63	-2.10	0.43	0.527205
7834	3R_DroMel_CAF1	20,985,136 – 20,985,333	- - - - - - - - -	12627	20,985,136 – 20,985,234	-	3	106	84.08	-1.88	0.66	0.508425
7834	3R_DroMel_CAF1	20,985,136 – 20,985,333	- - - - - - - - -	12628	20,985,234 – 20,985,333	+	5	100	94.27	-2.07	0.92	0.998867
7835	3R_DroMel_CAF1	20,985,967 – 20,986,058	- - - - - - - - -	12629	20,985,967 – 20,986,058	+	6	120	77.67	-1.82	0.66	0.915241
7836	3R_DroMel_CAF1	20,986,808 – 20,986,913	- - - "knownCDS=Parent=FBtr0084781;Name=CG13652-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13652-RA" - - - - -	12630	20,986,808 – 20,986,913	+	4	118	91.85	-1.57	0.84	0.651878
7837	3R_DroMel_CAF1	20,989,367 – 20,989,502	- - - - - - - - -	12631	20,989,367 – 20,989,476	-	5	116	74.60	-2.57	0.57	0.997242
				12632	20,989,406 – 20,989,502	+	3	102	90.79	-1.87	0.85	0.566176
				12633	20,989,406 – 20,989,502	-	3	102	90.79	-3.14	0.78	0.866060
7838	3R_DroMel_CAF1	20,991,006 – 20,991,207	- - - - - - - - -	12634	20,991,006 – 20,991,113	+	5	110	91.02	-1.39	0.79	0.517207
				12635	20,991,006 – 20,991,113	-	5	110	91.02	-2.13	0.85	0.990253
				12636	20,991,113 – 20,991,207	-	5	105	93.90	-1.87	0.90	0.993110
7839	3R_DroMel_CAF1	20,991,674 – 20,991,766	- - - - - - - - -	12637	20,991,674 – 20,991,766	+	6	120	81.32	-1.31	0.67	0.500000
7839	3R_DroMel_CAF1	20,991,674 – 20,991,766	- - - - - - - - -	12638	20,991,674 – 20,991,766	-	6	120	81.32	-2.00	0.69	0.809139
7840	3R_DroMel_CAF1	20,992,664 – 20,992,784	- - - - - - - - -	12639	20,992,664 – 20,992,784	+	6	120	98.61	-1.00	0.96	0.823055
7841	3R_DroMel_CAF1	20,993,685 – 20,993,803	- - - - - - - - -	12640	20,993,685 – 20,993,803	-	6	120	95.62	-2.03	0.90	0.986652
7842	3R_DroMel_CAF1	20,993,984 – 20,994,098	- - - - - - - - -	12641	20,993,984 – 20,994,098	+	6	119	76.93	-1.79	0.56	0.768678
7843	3R_DroMel_CAF1	20,994,269 – 20,994,389	- - - - - - - - -	12642	20,994,269 – 20,994,389	-	6	120	97.39	-1.82	0.94	0.994654
7844	3R_DroMel_CAF1	20,994,546 – 20,994,650	- - - - - - - - -	12643	20,994,546 – 20,994,650	-	6	110	84.61	-2.21	0.70	0.528227
7845	3R_DroMel_CAF1	20,995,749 – 20,995,859	- - - "knownCDS=Parent=FBtr0084876;Name=CG13661-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13661-RA" - - - - -	12644	20,995,749 – 20,995,859	+	6	111	80.66	-1.91	0.70	0.839596
7846	3R_DroMel_CAF1	20,999,116 – 20,999,211	- - - - - - - - -	12645	20,999,116 – 20,999,211	+	5	95	80.94	-1.67	0.66	0.586307
7847	3R_DroMel_CAF1	21,003,827 – 21,003,981	- - - - - - - - -	12646	21,003,827 – 21,003,944	-	5	120	85.61	-2.21	0.75	0.913870
7847	3R_DroMel_CAF1	21,003,827 – 21,003,981	- - - - - - - - -	12647	21,003,867 – 21,003,981	-	5	120	80.20	-1.73	0.61	0.563062
7848	3R_DroMel_CAF1	21,008,143 – 21,008,250	- - - - - - - - -	12648	21,008,143 – 21,008,250	+	6	110	94.94	-1.50	0.88	0.779070
7849	3R_DroMel_CAF1	21,008,776 – 21,008,885	- - - - - - - - -	12649	21,008,776 – 21,008,885	+	5	109	74.77	-1.54	0.15	0.646074
7850	3R_DroMel_CAF1	21,012,915 – 21,013,007	- - - - - - - - -	12650	21,012,915 – 21,013,007	+	5	97	86.66	-1.97	0.74	0.789143
7851	3R_DroMel_CAF1	21,013,911 – 21,014,041	- - - - - - - - -	12651	21,013,911 – 21,014,022	+	5	120	78.08	-2.42	0.55	0.973581
7851	3R_DroMel_CAF1	21,013,911 – 21,014,041	- - - - - - - - -	12652	21,013,951 – 21,014,041	+	5	112	77.63	-1.90	0.52	0.692160
7852	3R_DroMel_CAF1	21,014,869 – 21,014,970	- - - - - - - - -	12653	21,014,869 – 21,014,970	-	5	109	79.87	-1.40	0.75	0.549603
7853	3R_DroMel_CAF1	21,016,859 – 21,016,950	- - - "knownCDS=Parent=FBtr0084803;Name=dan-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11849-RA" - - - - -	12654	21,016,859 – 21,016,950	+	6	91	77.80	-2.01	0.53	0.794998
7854	3R_DroMel_CAF1	21,017,045 – 21,017,143	- - - "knownCDS=Parent=FBtr0084803;Name=dan-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11849-RA" - - - - -	12655	21,017,045 – 21,017,143	+	6	98	83.74	-1.83	0.75	0.622004
7855	3R_DroMel_CAF1	21,020,850 – 21,020,942	- - - - - - - - -	12656	21,020,850 – 21,020,942	+	5	98	90.47	-2.30	0.68	0.536784
7856	3R_DroMel_CAF1	21,022,644 – 21,022,751	- - - - - - - - -	12657	21,022,644 – 21,022,751	-	5	119	85.65	-1.83	0.66	0.548173
7857	3R_DroMel_CAF1	21,028,579 – 21,028,677	- - - - - - - - -	12658	21,028,579 – 21,028,677	+	5	118	71.95	-1.95	0.40	0.881315
7858	3R_DroMel_CAF1	21,030,938 – 21,031,035	- - - - - - - - -	12659	21,030,938 – 21,031,035	+	5	97	94.23	-1.40	0.92	0.918009
7859	3R_DroMel_CAF1	21,031,422 – 21,031,517	- - - - - - - - -	12660	21,031,422 – 21,031,517	+	6	120	73.84	-3.29	0.55	0.998529
7860	3R_DroMel_CAF1	21,034,641 – 21,034,731	- - - - - - - - -	12661	21,034,641 – 21,034,731	+	5	107	83.17	-2.09	0.67	0.812818
7860	3R_DroMel_CAF1	21,034,641 – 21,034,731	- - - - - - - - -	12662	21,034,641 – 21,034,731	-	5	107	83.17	-1.90	0.79	0.848042
7861	3R_DroMel_CAF1	21,038,002 – 21,038,137	- - - "knownCDS=Parent=FBtr0084805;Name=CG13654-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13654-RA" - - - - -	12663	21,038,002 – 21,038,097	+	6	107	72.93	-1.81	0.75	0.984842
				12664	21,038,002 – 21,038,097	-	6	107	72.93	-1.70	0.60	0.910650
				12665	21,038,026 – 21,038,137	+	6	111	71.59	-1.96	0.41	0.804106
7862	3R_DroMel_CAF1	21,039,356 – 21,039,456	- - - - - - - - -	12666	21,039,356 – 21,039,456	+	6	100	91.40	-1.91	0.82	0.527859
7863	3R_DroMel_CAF1	21,039,545 – 21,039,637	- - - - - - - - -	12667	21,039,545 – 21,039,637	-	5	93	95.56	-1.72	0.92	0.985800
7864	3R_DroMel_CAF1	21,045,171 – 21,045,283	- - - - - - - - -	12668	21,045,171 – 21,045,283	+	6	115	75.18	-1.93	0.60	0.941552
7865	3R_DroMel_CAF1	21,046,865 – 21,047,011	- - - - - - - - -	12669	21,046,865 – 21,046,985	-	6	120	77.61	-1.54	0.67	0.836228
7865	3R_DroMel_CAF1	21,046,865 – 21,047,011	- - - - - - - - -	12670	21,046,905 – 21,047,011	-	6	106	76.48	-1.60	0.66	0.878430
7866	3R_DroMel_CAF1	21,049,561 – 21,049,660	- - - - - - - - -	12671	21,049,561 – 21,049,660	+	5	100	89.20	-2.39	0.72	0.858247
7866	3R_DroMel_CAF1	21,049,561 – 21,049,660	- - - - - - - - -	12672	21,049,561 – 21,049,660	-	5	100	89.20	-1.72	0.77	0.746129
7867	3R_DroMel_CAF1	21,057,172 – 21,057,308	- - - - - - - - -	12673	21,057,172 – 21,057,282	+	4	114	88.54	-3.22	0.81	0.989265
				12674	21,057,172 – 21,057,282	-	4	114	88.54	-2.29	0.74	0.871750
				12675	21,057,209 – 21,057,308	+	5	106	78.29	-2.37	0.51	0.953498
7868	3R_DroMel_CAF1	21,064,104 – 21,064,197	- - - - - - - - -	12676	21,064,104 – 21,064,197	+	6	113	77.61	-2.19	0.64	0.959269
7868	3R_DroMel_CAF1	21,064,104 – 21,064,197	- - - - - - - - -	12677	21,064,104 – 21,064,197	-	6	113	77.61	-1.73	0.67	0.897813
7869	3R_DroMel_CAF1	21,064,777 – 21,064,874	- - - - - - - - -	12678	21,064,777 – 21,064,874	+	4	110	70.90	-1.99	0.61	0.983619
7870	3R_DroMel_CAF1	21,072,215 – 21,072,410	- - - "knownCDS=Parent=FBtr0084868;Name=RpS27-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10423-RA" - - - - -	12679	21,072,215 – 21,072,335	-	6	120	97.94	-1.32	0.98	0.985414
				12680	21,072,255 – 21,072,375	+	6	120	98.83	-1.73	0.99	0.998624
				12681	21,072,295 – 21,072,410	+	6	120	90.52	-2.62	0.91	0.997608
7871	3R_DroMel_CAF1	21,073,235 – 21,073,330	- - - - - - - - -	12682	21,073,235 – 21,073,330	+	5	96	85.68	-2.49	0.77	0.973041
7871	3R_DroMel_CAF1	21,073,235 – 21,073,330	- - - - - - - - -	12683	21,073,235 – 21,073,330	-	5	96	85.68	-1.93	0.65	0.575203
7872	3R_DroMel_CAF1	21,075,366 – 21,075,462	- - - "knownCDS=Parent=FBtr0084813;Name=Nup358-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11856-RA" - - - - -	12684	21,075,366 – 21,075,462	+	6	97	68.17	-2.10	0.42	0.953476
7873	3R_DroMel_CAF1	21,077,102 – 21,077,202	- - - "knownCDS=Parent=FBtr0084813;Name=Nup358-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11856-RA" - - - - -	12685	21,077,102 – 21,077,202	-	6	102	79.27	-1.36	0.63	0.523193
7874	3R_DroMel_CAF1	21,078,827 – 21,078,934	- - "RNAmicro=f:21078827_t:21078934_strand:+_p:0.890300" "knownCDS=Parent=FBtr0084813;Name=Nup358-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11856-RA" - - - - -	12686	21,078,827 – 21,078,934	-	6	108	88.88	-1.56	0.84	0.500000
7875	3R_DroMel_CAF1	21,081,194 – 21,081,292	- - - "knownCDS=Parent=FBtr0084813;Name=Nup358-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11856-RA" - - - - -	12687	21,081,194 – 21,081,292	+	6	98	86.39	-2.03	0.81	0.663406
7875	3R_DroMel_CAF1	21,081,194 – 21,081,292		12688	21,081,194 – 21,081,292	-	6	98	86.39	-2.35	0.76	0.567802
7876	3R_DroMel_CAF1	21,094,977 – 21,095,097	- - - "knownCDS=Parent=FBtr0084817;Name=CG13656-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13656-RA" - - - - -	12689	21,094,977 – 21,095,097	-	5	120	89.92	-1.29	0.89	0.619054
7877	3R_DroMel_CAF1	21,095,217 – 21,095,377	- - - "knownCDS=Parent=FBtr0084817;Name=CG13656-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13656-RA" - - - - -	12690	21,095,217 – 21,095,337	+	5	120	96.00	-1.39	0.84	0.593489
7877	3R_DroMel_CAF1	21,095,217 – 21,095,377		12691	21,095,257 – 21,095,377	+	5	120	92.33	-1.67	0.82	0.874024
7878	3R_DroMel_CAF1	21,096,262 – 21,096,382	- - - "knownCDS=Parent=FBtr0100614;Name=CG11889-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11889-RA" - - - - -	12692	21,096,262 – 21,096,382	+	6	120	87.17	-2.09	0.82	0.708419
7879	3R_DroMel_CAF1	21,102,230 – 21,102,350	- - "RNAmicro=f:21102230_t:21102349_strand:-_p:0.902679" "knownCDS=Parent=FBtr0084865;Name=CG10513-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10513-RA" - - - - -	12693	21,102,230 – 21,102,350	+	6	120	80.50	-1.84	0.67	0.800576
7879	3R_DroMel_CAF1	21,102,230 – 21,102,350		12694	21,102,230 – 21,102,350	-	6	120	80.50	-1.64	0.68	0.740195
7880	3R_DroMel_CAF1	21,105,588 – 21,105,693	- - - - - - - - -	12695	21,105,588 – 21,105,693	-	5	120	78.30	-1.24	0.81	0.658879
7881	3R_DroMel_CAF1	21,106,875 – 21,106,980	- - - - - - - - -	12696	21,106,875 – 21,106,980	-	6	109	81.57	-1.51	0.64	0.509442
7882	3R_DroMel_CAF1	21,109,885 – 21,110,000	- - - "knownCDS=Parent=FBtr0084824;Name=CG31300-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31300-RA" - - - - -	12697	21,109,885 – 21,110,000	+	6	118	78.44	-1.32	0.66	0.631509
7883	3R_DroMel_CAF1	21,115,959 – 21,116,079	- - - "knownCDS=Parent=FBtr0084827;Name=CG11893-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11893-RA" - - - - -	12698	21,115,959 – 21,116,079	-	6	120	82.22	-1.54	0.65	0.500000
7884	3R_DroMel_CAF1	21,118,503 – 21,118,616	- - - "knownCDS=Parent=FBtr0084863;Name=CG31098-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31098-RA" - - - - -	12699	21,118,503 – 21,118,616	+	6	120	81.73	-2.49	0.57	0.735053
7885	3R_DroMel_CAF1	21,128,047 – 21,128,139	- - - - - - - - -	12700	21,128,047 – 21,128,139	+	5	104	78.94	-2.37	0.50	0.936973
7885	3R_DroMel_CAF1	21,128,047 – 21,128,139	- - - - - - - - -	12701	21,128,047 – 21,128,139	-	5	104	78.94	-2.56	0.47	0.968628
7886	3R_DroMel_CAF1	21,128,476 – 21,128,596	- - - "knownCDS=Parent=FBtr0084829;Name=CG31370-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31370-RA" - - - - -	12702	21,128,476 – 21,128,596	-	4	120	87.36	-1.56	0.75	0.625524
7887	3R_DroMel_CAF1	21,128,866 – 21,128,986	- - - "knownCDS=Parent=FBtr0084829;Name=CG31370-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31370-RA" - - - - -	12703	21,128,866 – 21,128,986	+	5	120	90.17	-1.69	0.80	0.808004
7888	3R_DroMel_CAF1	21,129,747 – 21,129,850	- - - - - - - - -	12704	21,129,747 – 21,129,850	+	5	120	73.40	-2.11	0.32	0.952728
7889	3R_DroMel_CAF1	21,136,201 – 21,136,320	- - - "knownCDS=Parent=FBtr0084856;Name=CG31099-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31099-RA" - - - - -	12705	21,136,201 – 21,136,320	-	6	119	84.09	-1.68	0.75	0.538659
7890	3R_DroMel_CAF1	21,138,807 – 21,138,923	- - - - - - - - -	12706	21,138,807 – 21,138,923	+	5	120	79.61	-2.47	0.60	0.969951
7890	3R_DroMel_CAF1	21,138,807 – 21,138,923	- - - - - - - - -	12707	21,138,807 – 21,138,923	-	5	120	79.61	-2.18	0.62	0.920979
7891	3R_DroMel_CAF1	21,142,315 – 21,142,451	- - - "knownCDS=Parent=FBtr0084853;Name=CG10553-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10553-RA" - - - - -	12708	21,142,315 – 21,142,411	-	5	120	78.68	-2.57	0.78	0.994528
7891	3R_DroMel_CAF1	21,142,315 – 21,142,451		12709	21,142,336 – 21,142,451	-	6	120	80.61	-1.53	0.64	0.577971
7892	3R_DroMel_CAF1	21,144,332 – 21,144,452	- - - "knownCDS=Parent=FBtr0084852;Name=CG10560-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10560-RA" - - - - -	12710	21,144,332 – 21,144,452	+	5	120	86.17	-1.67	0.71	0.554136
7893	3R_DroMel_CAF1	21,146,375 – 21,146,486	- - - - - - - - -	12711	21,146,375 – 21,146,486	-	5	120	79.83	-2.09	0.48	0.684777
7894	3R_DroMel_CAF1	21,158,380 – 21,158,500	- - - "knownCDS=Parent=FBtr0084848;Name=CG10669-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10669-RA" - - - - -	12712	21,158,380 – 21,158,500	+	6	120	72.61	-2.02	0.36	0.683136
7895	3R_DroMel_CAF1	21,161,086 – 21,161,199	- - - - - - - - -	12713	21,161,086 – 21,161,199	+	6	113	80.24	-1.93	0.70	0.865550
7895	3R_DroMel_CAF1	21,161,086 – 21,161,199	- - - - - - - - -	12714	21,161,086 – 21,161,199	-	6	113	80.24	-2.06	0.76	0.910824
7896	3R_DroMel_CAF1	21,162,721 – 21,162,836	- - - - - - - - -	12715	21,162,721 – 21,162,836	+	6	115	80.64	-2.68	0.69	0.939369
7897	3R_DroMel_CAF1	21,168,600 – 21,168,692	- - - "knownCDS=Parent=FBtr0084832;Name=rha-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11908-RA" - - - - -	12716	21,168,600 – 21,168,692	-	5	101	72.71	-1.64	0.15	0.716742
7898	3R_DroMel_CAF1	21,168,785 – 21,168,903	- - - "knownCDS=Parent=FBtr0084832;Name=rha-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11908-RA" - - - - -	12717	21,168,785 – 21,168,903	+	5	118	84.41	-2.45	0.60	0.772797
7899	3R_DroMel_CAF1	21,177,036 – 21,177,131	- - - - - - - - -	12718	21,177,036 – 21,177,131	+	5	98	90.60	-2.35	0.77	0.955527
7899	3R_DroMel_CAF1	21,177,036 – 21,177,131	- - - - - - - - -	12719	21,177,036 – 21,177,131	-	5	98	90.60	-2.24	0.71	0.683285
7900	3R_DroMel_CAF1	21,180,218 – 21,180,343	- - - - - - - - -	12720	21,180,218 – 21,180,317	-	5	103	83.92	-1.54	0.74	0.522684
7900	3R_DroMel_CAF1	21,180,218 – 21,180,343	- - - - - - - - -	12721	21,180,248 – 21,180,343	+	6	98	77.18	-1.08	0.68	0.556841
7901	3R_DroMel_CAF1	21,181,683 – 21,181,816	- - - "knownCDS=Parent=FBtr0089983;Name=Fur1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10772-RB" - - - - -	12722	21,181,683 – 21,181,780	+	6	106	76.33	-1.35	0.69	0.827224
				12723	21,181,701 – 21,181,816	+	6	117	76.90	-1.42	0.76	0.903874
				12724	21,181,701 – 21,181,816	-	6	117	76.90	-1.61	0.65	0.859097
7902	3R_DroMel_CAF1	21,186,608 – 21,186,702	- - - - - - - - -	12725	21,186,608 – 21,186,702	+	5	95	89.02	-1.87	0.86	0.962585
7902	3R_DroMel_CAF1	21,186,608 – 21,186,702	- - - - - - - - -	12726	21,186,608 – 21,186,702	-	5	95	89.02	-1.52	0.75	0.516539
7903	3R_DroMel_CAF1	21,210,073 – 21,210,200	- - - "knownCDS=Parent=FBtr0084834;Name=CG31437-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31437-RA" - - - - -	12727	21,210,073 – 21,210,166	+	6	111	63.84	-2.25	0.40	0.970162
				12728	21,210,096 – 21,210,200	+	6	113	72.77	-2.26	0.51	0.979551
				12729	21,210,096 – 21,210,200	-	6	113	72.77	-2.20	0.55	0.982061
7904	3R_DroMel_CAF1	21,213,105 – 21,213,204	- - - - - - - - -	12730	21,213,105 – 21,213,204	+	6	103	83.19	-1.93	0.64	0.514999
7905	3R_DroMel_CAF1	21,214,165 – 21,214,305	- - - - - - - - -	12731	21,214,165 – 21,214,279	+	6	116	79.15	-2.77	0.57	0.962425
				12732	21,214,165 – 21,214,279	-	6	116	79.15	-2.14	0.55	0.815555
				12733	21,214,201 – 21,214,305	+	6	114	72.74	-1.63	0.58	0.853679
				12734	21,214,201 – 21,214,305	-	6	114	72.74	-1.66	0.52	0.730432
7906	3R_DroMel_CAF1	21,216,850 – 21,216,947	- - - - - - - - -	12735	21,216,850 – 21,216,947	-	5	98	96.08	-2.26	0.76	0.623507
7907	3R_DroMel_CAF1	21,221,690 – 21,221,790	- - - - - - - - -	12736	21,221,690 – 21,221,790	-	5	100	83.50	-2.73	0.58	0.898625
7908	3R_DroMel_CAF1	21,221,802 – 21,221,909	- - - - - - - - -	12737	21,221,802 – 21,221,909	-	6	119	80.46	-2.14	0.50	0.522404
7909	3R_DroMel_CAF1	21,226,141 – 21,226,301	- - - "knownCDS=Parent=FBtr0084845;Name=CG31439-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31439-RA" - - - - -	12738	21,226,141 – 21,226,261	+	3	120	97.50	-2.63	0.94	0.949618
7909	3R_DroMel_CAF1	21,226,141 – 21,226,301		12739	21,226,181 – 21,226,301	+	3	120	93.87	-2.59	0.85	0.837906
7910	3R_DroMel_CAF1	21,227,430 – 21,227,523	- - - - - - - - -	12740	21,227,430 – 21,227,523	+	5	93	95.27	-2.72	0.86	0.999018
7910	3R_DroMel_CAF1	21,227,430 – 21,227,523	- - - - - - - - -	12741	21,227,430 – 21,227,523	-	5	93	95.27	-1.57	0.95	0.983205
7911	3R_DroMel_CAF1	21,228,235 – 21,228,354	- - - - - - - - -	12742	21,228,235 – 21,228,354	-	5	119	82.77	-2.53	0.50	0.739169
7912	3R_DroMel_CAF1	21,229,692 – 21,229,805	- - - - - - - - -	12743	21,229,692 – 21,229,805	+	5	116	72.93	-2.04	0.41	0.923451
7912	3R_DroMel_CAF1	21,229,692 – 21,229,805	- - - - - - - - -	12744	21,229,692 – 21,229,805	-	5	116	72.93	-2.81	0.38	0.999144
7913	3R_DroMel_CAF1	21,229,919 – 21,230,030	- - - - - - - - -	12745	21,229,919 – 21,230,030	-	5	119	69.16	-1.83	0.10	0.531619
7914	3R_DroMel_CAF1	21,230,075 – 21,230,179	- - - - - - - - -	12746	21,230,075 – 21,230,179	-	5	104	97.69	-1.42	0.90	0.754343
7915	3R_DroMel_CAF1	21,237,336 – 21,237,436	- - - - - - - - -	12747	21,237,336 – 21,237,436	+	5	100	96.10	-1.74	0.87	0.953779
7916	3R_DroMel_CAF1	21,237,584 – 21,237,688	- - - - - - - - -	12748	21,237,584 – 21,237,688	+	4	119	80.72	-2.94	0.70	0.997062
7917	3R_DroMel_CAF1	21,237,780 – 21,237,873	- - - - - - - - -	12749	21,237,780 – 21,237,873	-	6	93	96.06	-2.07	0.81	0.505866
7918	3R_DroMel_CAF1	21,238,485 – 21,238,641	- - - - - - - - -	12750	21,238,485 – 21,238,601	+	3	116	92.08	-2.22	1.00	0.981939
7918	3R_DroMel_CAF1	21,238,485 – 21,238,641	- - - - - - - - -	12751	21,238,524 – 21,238,641	+	4	119	82.54	-1.51	0.69	0.514378
7919	3R_DroMel_CAF1	21,244,273 – 21,244,365	- - - - - - - - -	12752	21,244,273 – 21,244,365	+	4	100	83.25	-1.87	0.66	0.711708
7919	3R_DroMel_CAF1	21,244,273 – 21,244,365	- - - - - - - - -	12753	21,244,273 – 21,244,365	-	4	100	83.25	-1.73	0.69	0.681372
7920	3R_DroMel_CAF1	21,244,392 – 21,244,532	- - - - - - - - -	12754	21,244,392 – 21,244,500	+	6	120	81.40	-1.89	0.69	0.771816
				12755	21,244,392 – 21,244,500	-	6	120	81.40	-1.89	0.60	0.609720
				12756	21,244,422 – 21,244,532	+	6	120	79.81	-1.85	0.56	0.580941
				12757	21,244,422 – 21,244,532	-	6	120	79.81	-2.67	0.62	0.948179
7921	3R_DroMel_CAF1	21,246,669 – 21,246,761	- - - - - - - - -	12758	21,246,669 – 21,246,761	+	6	101	82.80	-1.71	0.81	0.722040
7922	3R_DroMel_CAF1	21,248,650 – 21,248,750	- - - - - - - - -	12759	21,248,650 – 21,248,750	+	5	106	77.42	-2.18	0.34	0.891250
7923	3R_DroMel_CAF1	21,249,252 – 21,249,348	- - - - - - - - -	12760	21,249,252 – 21,249,348	+	5	105	84.07	-2.47	0.72	0.952862
7924	3R_DroMel_CAF1	21,251,464 – 21,251,580	- - - - - - - - -	12761	21,251,464 – 21,251,580	+	6	116	94.54	-2.51	0.85	0.966827
7925	3R_DroMel_CAF1	21,252,665 – 21,252,781	- - - - - - - - -	12762	21,252,665 – 21,252,781	+	4	120	89.73	-1.99	0.72	0.705283
7926	3R_DroMel_CAF1	21,252,975 – 21,253,298	- - - - - - - - -	12763	21,252,975 – 21,253,085	+	5	112	92.96	-1.78	0.76	0.640793
				12764	21,253,014 – 21,253,111	+	5	98	92.61	-2.62	0.84	0.998011
				12765	21,253,050 – 21,253,145	+	5	102	86.91	-3.05	0.73	0.980839
				12766	21,253,111 – 21,253,219	+	5	114	88.68	-1.41	0.84	0.625604
				12767	21,253,179 – 21,253,298	+	4	120	96.65	-1.91	0.88	0.706700
				12768	21,253,179 – 21,253,298	-	4	120	96.65	-2.47	0.87	0.888232
7927	3R_DroMel_CAF1	21,254,116 – 21,254,210	- - - - - - - - -	12769	21,254,116 – 21,254,210	-	4	94	97.87	-2.93	0.90	0.906794
7928	3R_DroMel_CAF1	21,255,083 – 21,255,178	- - - - - - - - -	12770	21,255,083 – 21,255,178	-	5	95	90.29	-1.28	0.85	0.548244
7929	3R_DroMel_CAF1	21,256,797 – 21,256,933	- - - - - - - - -	12771	21,256,797 – 21,256,895	+	5	98	83.06	-3.12	0.68	0.990413
				12772	21,256,797 – 21,256,895	-	5	98	83.06	-2.58	0.62	0.919157
				12773	21,256,827 – 21,256,933	+	5	108	79.96	-2.20	0.58	0.885475
7930	3R_DroMel_CAF1	21,257,453 – 21,257,616	- - - - - - - - -	12774	21,257,453 – 21,257,558	+	5	120	72.23	-2.14	0.45	0.967067
				12775	21,257,453 – 21,257,558	-	5	120	72.23	-1.91	0.36	0.843091
				12776	21,257,488 – 21,257,581	-	5	97	89.96	-2.62	0.67	0.622514
				12777	21,257,518 – 21,257,616	-	5	98	84.18	-3.50	0.82	0.999119
7931	3R_DroMel_CAF1	21,259,177 – 21,259,268	- - - - - - - - -	12778	21,259,177 – 21,259,268	+	6	120	71.99	-1.88	0.54	0.932413
7932	3R_DroMel_CAF1	21,259,586 – 21,259,843	- - - - - - - - -	12779	21,259,586 – 21,259,692	-	4	120	73.11	-1.62	0.58	0.566798
				12780	21,259,692 – 21,259,804	-	4	114	95.72	-1.70	0.87	0.599929
				12781	21,259,731 – 21,259,843	-	5	120	76.20	-2.23	0.32	0.952423
7933	3R_DroMel_CAF1	21,264,360 – 21,264,452	- - - - - - - - -	12782	21,264,360 – 21,264,452	+	4	94	91.03	-2.25	0.88	0.970786
7933	3R_DroMel_CAF1	21,264,360 – 21,264,452	- - - - - - - - -	12783	21,264,360 – 21,264,452	-	4	94	91.03	-1.79	0.75	0.631849
7934	3R_DroMel_CAF1	21,267,815 – 21,267,935	- - - - - - - - -	12784	21,267,815 – 21,267,935	-	3	120	88.33	-1.73	0.84	0.549534
7935	3R_DroMel_CAF1	21,270,677 – 21,270,795	- - - - - - - - -	12785	21,270,677 – 21,270,795	-	5	120	87.04	-2.52	0.67	0.825338
7936	3R_DroMel_CAF1	21,270,898 – 21,271,009	- - - - - - - - -	12786	21,270,898 – 21,271,009	-	4	111	98.20	-1.85	1.01	0.796858
7937	3R_DroMel_CAF1	21,287,910 – 21,288,022	- - - - - - - - -	12787	21,287,910 – 21,288,022	+	3	120	68.73	-1.98	0.54	0.971247
7938	3R_DroMel_CAF1	21,303,225 – 21,303,400	- - - "knownCDS=Parent=FBtr0084836;Name=MED28-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5121-RA" - - - - -	12788	21,303,225 – 21,303,324	+	6	108	75.03	-1.97	0.47	0.766760
				12789	21,303,225 – 21,303,324	-	6	108	75.03	-1.99	0.47	0.790481
				12790	21,303,253 – 21,303,361	-	6	111	79.40	-2.49	0.59	0.933984
				12791	21,303,290 – 21,303,400	-	6	114	77.31	-1.88	0.57	0.821673
7939	3R_DroMel_CAF1	21,307,746 – 21,307,838	- - - "knownCDS=Parent=FBtr0084838;Name=XNP-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4548-RB" - - - - -	12792	21,307,746 – 21,307,838	+	3	92	96.38	-2.08	0.92	0.813913
7940	3R_DroMel_CAF1	21,307,968 – 21,308,088	- - - "knownCDS=Parent=FBtr0084838;Name=XNP-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4548-RB" - - - - -	12793	21,307,968 – 21,308,088	+	3	120	97.22	-1.94	0.98	0.880926
7941	3R_DroMel_CAF1	21,312,522 – 21,312,642	- - - "knownCDS=Parent=FBtr0084897;Name=Dhap-at-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4625-RA" - - - - -	12794	21,312,522 – 21,312,642	-	6	120	75.33	-2.13	0.42	0.760603
7942	3R_DroMel_CAF1	21,314,509 – 21,314,628	- - - "knownCDS=Parent=FBtr0084897;Name=Dhap-at-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4625-RA" - - - - -	12795	21,314,509 – 21,314,628	+	6	120	73.80	-1.92	0.46	0.768715
7943	3R_DroMel_CAF1	21,316,457 – 21,316,567	- - - - - - - - -	12796	21,316,457 – 21,316,567	-	4	118	77.91	1.51	0.95	0.642539
7944	3R_DroMel_CAF1	21,324,338 – 21,324,436	- - - - - - - - -	12797	21,324,338 – 21,324,436	-	5	112	87.79	-1.41	0.80	0.506560
7945	3R_DroMel_CAF1	21,324,602 – 21,324,706	- - - - - - - - -	12798	21,324,602 – 21,324,706	+	6	117	75.11	-2.25	0.60	0.981702
7946	3R_DroMel_CAF1	21,326,163 – 21,326,265	- - - - - - - - -	12799	21,326,163 – 21,326,265	-	6	120	74.09	-1.16	0.65	0.615455
7947	3R_DroMel_CAF1	21,326,575 – 21,326,728	- - - - - - - - -	12800	21,326,575 – 21,326,673	-	5	110	77.69	-1.60	0.62	0.555540
				12801	21,326,633 – 21,326,728	+	6	111	74.98	-3.33	0.39	0.996777
				12802	21,326,633 – 21,326,728	-	6	111	74.98	-3.16	0.46	0.997272
7948	3R_DroMel_CAF1	21,329,118 – 21,329,210	- - - - - - - - -	12803	21,329,118 – 21,329,210	-	5	92	96.09	-1.63	0.88	0.938017
7949	3R_DroMel_CAF1	21,329,284 – 21,329,378	- - - - - - - - -	12804	21,329,284 – 21,329,378	-	6	105	70.65	-2.09	0.31	0.741508
7950	3R_DroMel_CAF1	21,335,345 – 21,335,435	- - - - - - - - -	12805	21,335,345 – 21,335,435	+	6	94	79.43	-2.87	0.46	0.915430
7950	3R_DroMel_CAF1	21,335,345 – 21,335,435	- - - - - - - - -	12806	21,335,345 – 21,335,435	-	6	94	79.43	-3.19	0.37	0.869012
7951	3R_DroMel_CAF1	21,336,294 – 21,336,387	- - - - - - - - -	12807	21,336,294 – 21,336,387	-	6	99	85.47	-2.60	0.78	0.780714
7952	3R_DroMel_CAF1	21,341,961 – 21,342,051	- - - - - - - - -	12808	21,341,961 – 21,342,051	-	5	92	94.75	-1.77	0.89	0.980355
7953	3R_DroMel_CAF1	21,343,961 – 21,344,055	- - - - - - - - -	12809	21,343,961 – 21,344,055	+	6	103	75.81	-2.70	0.39	0.957021
7954	3R_DroMel_CAF1	21,345,370 – 21,345,481	- - - "knownCDS=Parent=FBtr0084881;Name=msi-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5099-RB" - - - - -	12810	21,345,370 – 21,345,481	+	6	120	74.08	-1.56	0.73	0.962964
7954	3R_DroMel_CAF1	21,345,370 – 21,345,481		12811	21,345,370 – 21,345,481	-	6	120	74.08	-1.49	0.68	0.923595
7955	3R_DroMel_CAF1	21,347,452 – 21,347,552	- - - - - - - - -	12812	21,347,452 – 21,347,552	-	6	120	83.29	-2.09	0.71	0.667151
7956	3R_DroMel_CAF1	21,348,390 – 21,348,503	- - - - - - - - -	12813	21,348,390 – 21,348,503	+	4	113	87.80	-1.54	0.72	0.581741
7957	3R_DroMel_CAF1	21,350,440 – 21,350,539	- - - - - - - - -	12814	21,350,440 – 21,350,539	+	6	120	83.09	-2.28	0.68	0.699776
7958	3R_DroMel_CAF1	21,350,670 – 21,350,772	- - - - - - - - -	12815	21,350,670 – 21,350,772	+	4	102	88.87	-2.15	0.78	0.894910
7959	3R_DroMel_CAF1	21,351,756 – 21,351,849	- - - - - - - - -	12816	21,351,756 – 21,351,849	+	6	112	72.55	-2.20	0.31	0.732338
7959	3R_DroMel_CAF1	21,351,756 – 21,351,849	- - - - - - - - -	12817	21,351,756 – 21,351,849	-	6	112	72.55	-2.17	0.32	0.730640
7960	3R_DroMel_CAF1	21,352,944 – 21,353,087	- - "RNAmicro=f:21352944_t:21353054_strand:+_p:0.779315" - - - - - -	12818	21,352,944 – 21,353,055	+	5	111	93.77	-2.10	0.91	0.998651
7960	3R_DroMel_CAF1	21,352,944 – 21,353,087		12819	21,352,979 – 21,353,087	-	5	108	93.60	-1.24	0.96	0.862275
7961	3R_DroMel_CAF1	21,355,191 – 21,355,299	- - - - - - - - -	12820	21,355,191 – 21,355,299	+	4	114	83.46	-1.58	0.87	0.726725
7962	3R_DroMel_CAF1	21,355,422 – 21,355,518	- - - - - - - - -	12821	21,355,422 – 21,355,518	+	5	97	94.92	-2.32	0.90	0.999047
7963	3R_DroMel_CAF1	21,356,712 – 21,356,824	- - - - - - - - -	12822	21,356,712 – 21,356,824	-	3	117	79.14	-0.94	0.86	0.600039
7964	3R_DroMel_CAF1	21,358,886 – 21,358,991	- - - - - - - - -	12823	21,358,886 – 21,358,991	-	5	107	87.54	-2.03	0.86	0.973824
7965	3R_DroMel_CAF1	21,359,477 – 21,359,569	- - - - - - - - -	12824	21,359,477 – 21,359,569	+	4	93	92.78	-1.68	0.98	0.917445
7966	3R_DroMel_CAF1	21,360,506 – 21,360,597	- - - - - - - - -	12825	21,360,506 – 21,360,597	+	6	101	81.53	-2.38	0.57	0.727417
7967	3R_DroMel_CAF1	21,362,571 – 21,362,711	- - - - - - - - -	12826	21,362,571 – 21,362,671	+	6	111	78.93	-2.58	0.66	0.967003
				12827	21,362,571 – 21,362,671	-	6	111	78.93	-2.36	0.79	0.962948
				12828	21,362,596 – 21,362,711	-	5	120	82.94	-1.49	0.82	0.546297
7968	3R_DroMel_CAF1	21,366,412 – 21,366,507	- - - - - - - - -	12829	21,366,412 – 21,366,507	-	5	99	88.99	-1.52	0.85	0.785434
7969	3R_DroMel_CAF1	21,366,663 – 21,366,768	- - - - - - - - -	12830	21,366,663 – 21,366,768	-	5	105	92.52	-2.23	0.72	0.628779
7970	3R_DroMel_CAF1	21,370,666 – 21,370,768	- - - - - - - - -	12831	21,370,666 – 21,370,768	-	6	116	81.08	-1.75	0.60	0.566950
7971	3R_DroMel_CAF1	21,374,493 – 21,374,626	- - - - - - - - -	12832	21,374,493 – 21,374,605	-	5	120	78.27	-2.82	0.52	0.994829
7971	3R_DroMel_CAF1	21,374,493 – 21,374,626	- - - - - - - - -	12833	21,374,530 – 21,374,626	-	5	103	86.12	-2.53	0.75	0.960897
7972	3R_DroMel_CAF1	21,375,833 – 21,375,961	- - - - - - - - -	12834	21,375,833 – 21,375,936	+	5	103	93.07	-2.46	0.75	0.890660
7972	3R_DroMel_CAF1	21,375,833 – 21,375,961	- - - - - - - - -	12835	21,375,867 – 21,375,961	-	6	113	77.25	-2.06	0.44	0.552052
7973	3R_DroMel_CAF1	21,376,338 – 21,376,433	- - - - - - - - -	12836	21,376,338 – 21,376,433	+	5	95	98.32	-1.70	0.98	0.983709
7973	3R_DroMel_CAF1	21,376,338 – 21,376,433	- - - - - - - - -	12837	21,376,338 – 21,376,433	-	5	95	98.32	-2.29	1.00	0.999497
7974	3R_DroMel_CAF1	21,378,207 – 21,378,309	- - - - - - - - -	12838	21,378,207 – 21,378,309	-	5	104	93.21	-1.70	0.80	0.783105
7975	3R_DroMel_CAF1	21,379,129 – 21,379,229	- - - - - - - - -	12839	21,379,129 – 21,379,229	+	6	120	79.03	-2.87	0.52	0.960860
7976	3R_DroMel_CAF1	21,379,302 – 21,379,408	- - - - - - - - -	12840	21,379,302 – 21,379,408	+	6	120	79.40	-2.38	0.71	0.952136
7976	3R_DroMel_CAF1	21,379,302 – 21,379,408	- - - - - - - - -	12841	21,379,302 – 21,379,408	-	6	120	79.40	-1.58	0.72	0.832911
7977	3R_DroMel_CAF1	21,381,453 – 21,381,547	- - - - - - - - -	12842	21,381,453 – 21,381,547	-	5	95	97.46	-1.60	0.95	0.973876
7978	3R_DroMel_CAF1	21,384,055 – 21,384,175	- - - - - - - - -	12843	21,384,055 – 21,384,175	+	5	120	96.67	-1.94	0.79	0.630640
7979	3R_DroMel_CAF1	21,387,915 – 21,388,023	- - - - - - - - -	12844	21,387,915 – 21,388,023	+	6	120	72.15	-2.92	0.40	0.997012
7979	3R_DroMel_CAF1	21,387,915 – 21,388,023	- - - - - - - - -	12845	21,387,915 – 21,388,023	-	6	120	72.15	-2.49	0.42	0.986125
7980	3R_DroMel_CAF1	21,392,550 – 21,392,671	- - - - - - - - -	12846	21,392,550 – 21,392,640	+	5	96	68.86	-2.33	0.54	0.994646
				12847	21,392,550 – 21,392,640	-	5	96	68.86	-1.73	0.43	0.639638
				12848	21,392,574 – 21,392,671	-	5	112	69.37	-1.79	0.31	0.616834
7981	3R_DroMel_CAF1	21,402,293 – 21,402,387	- - - - - - - - -	12849	21,402,293 – 21,402,387	+	5	113	77.05	-1.91	0.69	0.937355
7981	3R_DroMel_CAF1	21,402,293 – 21,402,387	- - - - - - - - -	12850	21,402,293 – 21,402,387	-	5	113	77.05	-1.54	0.81	0.911673
7982	3R_DroMel_CAF1	21,403,313 – 21,403,460	- - - - - - - - -	12851	21,403,313 – 21,403,431	+	3	118	87.01	-2.23	0.72	0.632160
				12852	21,403,313 – 21,403,431	-	3	118	87.01	-2.19	0.75	0.678069
				12853	21,403,353 – 21,403,460	+	3	107	94.39	-2.97	0.84	0.893263
				12854	21,403,353 – 21,403,460	-	3	107	94.39	-3.06	0.98	0.993105
7983	3R_DroMel_CAF1	21,406,338 – 21,406,433	- - - - - - - - -	12855	21,406,338 – 21,406,433	-	5	112	64.05	-1.93	0.35	0.527437
7984	3R_DroMel_CAF1	21,406,984 – 21,407,080	- - - - - - - - -	12856	21,406,984 – 21,407,080	-	6	116	76.67	-1.36	0.66	0.752965
7985	3R_DroMel_CAF1	21,407,401 – 21,407,511	- - - "knownCDS=Parent=FBtr0084896;Name=CG4582-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4582-RA" - - - - -	12857	21,407,401 – 21,407,511	-	6	110	77.35	-1.59	0.59	0.684975
7986	3R_DroMel_CAF1	21,411,187 – 21,411,297	- - - - - - - - -	12858	21,411,187 – 21,411,297	-	5	110	85.73	-1.74	0.71	0.613362
7987	3R_DroMel_CAF1	21,411,651 – 21,411,744	- - - - - - - - -	12859	21,411,651 – 21,411,744	+	6	108	79.85	-2.06	0.75	0.920799
7988	3R_DroMel_CAF1	21,414,579 – 21,414,689	- - "RNAmicro=f:21414579_t:21414698_strand:+_p:1.000000" - - - - - -	12860	21,414,579 – 21,414,689	+	6	120	76.76	-0.87	0.78	0.653343
7988	3R_DroMel_CAF1	21,414,579 – 21,414,689		12861	21,414,579 – 21,414,689	-	6	120	76.76	-4.29	0.88	0.941243
7989	3R_DroMel_CAF1	21,417,356 – 21,417,476	- - - - - - - - -	12862	21,417,356 – 21,417,466	+	5	110	87.98	-1.99	0.67	0.519050
7989	3R_DroMel_CAF1	21,417,356 – 21,417,476	- - - - - - - - -	12863	21,417,386 – 21,417,476	-	5	90	85.41	-1.82	0.66	0.558219
7990	3R_DroMel_CAF1	21,418,436 – 21,418,546	- - - "knownCDS=Parent=FBtr0084894;Name=CG12250-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12250-RA" - - - - -	12864	21,418,436 – 21,418,546	-	6	110	80.18	-1.55	0.61	0.536070
7991	3R_DroMel_CAF1	21,420,770 – 21,420,980	- - - "knownCDS=Parent=FBtr0084881;Name=msi-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5099-RB" - - - - -	12865	21,420,770 – 21,420,878	-	6	117	78.29	-1.59	0.63	0.737489
				12866	21,420,878 – 21,420,980	+	6	117	70.85	-1.88	0.45	0.846295
				12867	21,420,878 – 21,420,980	-	6	117	70.85	-2.29	0.39	0.960285
7992	3R_DroMel_CAF1	21,421,780 – 21,421,883	- - - - - - - - -	12868	21,421,780 – 21,421,883	+	4	114	74.19	-2.93	0.50	0.996009
7993	3R_DroMel_CAF1	21,439,959 – 21,440,049	- - - "knownCDS=Parent=FBtr0084883;Name=CG5079-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5079-RA" - - - - -	12869	21,439,959 – 21,440,049	+	6	96	80.03	-2.55	0.49	0.792370
7994	3R_DroMel_CAF1	21,442,688 – 21,442,785	- - - - - - - - -	12870	21,442,688 – 21,442,785	-	5	99	71.56	-1.69	0.20	0.657027
7995	3R_DroMel_CAF1	21,446,834 – 21,446,943	- - - - - - - - -	12871	21,446,834 – 21,446,943	-	5	109	94.12	-1.97	0.81	0.922612
7996	3R_DroMel_CAF1	21,449,389 – 21,449,482	- - - - - - - - -	12872	21,449,389 – 21,449,482	-	6	103	74.78	-1.77	0.61	0.921551
7997	3R_DroMel_CAF1	21,451,477 – 21,451,597	- - - "knownCDS=Parent=FBtr0100569;Name=CG4685-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4685-RB" - - - - -	12873	21,451,477 – 21,451,597	-	6	120	78.83	-1.53	0.59	0.548069
7998	3R_DroMel_CAF1	21,454,837 – 21,454,944	- - - - - - - - -	12874	21,454,837 – 21,454,944	+	6	109	71.47	-1.57	0.49	0.531546
7998	3R_DroMel_CAF1	21,454,837 – 21,454,944	- - - - - - - - -	12875	21,454,837 – 21,454,944	-	6	109	71.47	-1.68	0.59	0.919321
7999	3R_DroMel_CAF1	21,455,559 – 21,455,670	- - - - - - - - -	12876	21,455,559 – 21,455,670	-	5	114	87.00	-1.92	0.91	0.970801
8000	3R_DroMel_CAF1	21,460,023 – 21,460,121	- - - - - - - - -	12877	21,460,023 – 21,460,121	+	6	118	82.58	-2.05	0.69	0.708719
8001	3R_DroMel_CAF1	21,463,557 – 21,463,655	- - - - - - - - -	12878	21,463,557 – 21,463,655	+	6	104	82.03	-1.52	0.70	0.597859
8002	3R_DroMel_CAF1	21,466,567 – 21,466,662	- - - - - - - - -	12879	21,466,567 – 21,466,662	+	6	113	90.76	-1.94	0.98	0.998458
8002	3R_DroMel_CAF1	21,466,567 – 21,466,662	- - - - - - - - -	12880	21,466,567 – 21,466,662	-	6	113	90.76	-1.54	0.92	0.926526
8003	3R_DroMel_CAF1	21,467,964 – 21,468,075	- - - - - - - - -	12881	21,467,964 – 21,468,075	+	5	120	75.00	-1.74	0.23	0.731114
8003	3R_DroMel_CAF1	21,467,964 – 21,468,075	- - - - - - - - -	12882	21,467,964 – 21,468,075	-	5	120	75.00	-2.58	0.39	0.995486
8004	3R_DroMel_CAF1	21,469,475 – 21,469,584	- - - - - - - - -	12883	21,469,475 – 21,469,584	+	4	120	88.61	-4.08	0.74	0.961856
8004	3R_DroMel_CAF1	21,469,475 – 21,469,584	- - - - - - - - -	12884	21,469,475 – 21,469,584	-	4	120	88.61	-3.62	0.87	0.996328
8005	3R_DroMel_CAF1	21,469,749 – 21,469,839	- - - - - - - - -	12885	21,469,749 – 21,469,839	+	4	92	87.55	-1.76	0.85	0.827967
8005	3R_DroMel_CAF1	21,469,749 – 21,469,839	- - - - - - - - -	12886	21,469,749 – 21,469,839	-	4	92	87.55	-2.02	0.83	0.907506
8006	3R_DroMel_CAF1	21,470,376 – 21,470,472	- - - - - - - - -	12887	21,470,376 – 21,470,472	-	6	98	94.97	-1.87	0.88	0.947243
8007	3R_DroMel_CAF1	21,472,200 – 21,472,333	"known=stem_loop ID=Dmel\CG_RFAM_MIR_48002344;Name=dme-mir-92a" - "RNAmicro=f:21472228_t:21472347_strand:-_p:0.932148" - - - "miRBase=dme-mir-92a\|6e-50" - "Flybase=FBgn0067682:mir-92a:microRNA_encoding_gene\|9e-07"	12888	21,472,200 – 21,472,307	+	6	112	83.18	-2.83	0.87	0.968302
				12889	21,472,200 – 21,472,307	-	6	112	83.18	-2.70	0.91	0.979319
				12890	21,472,228 – 21,472,333	+	6	120	76.60	-4.01	0.85	0.956368
				12891	21,472,228 – 21,472,333	-	6	120	76.60	-2.99	0.76	0.987156
8008	3R_DroMel_CAF1	21,472,788 – 21,472,906	- - - - - - - - -	12892	21,472,788 – 21,472,906	-	5	118	89.07	-1.50	0.75	0.506017
8009	3R_DroMel_CAF1	21,477,120 – 21,477,230	"known=miRNA ID=Dmel\CG_RFAM_MIR_48002347;Parent=Dmel\CG_RFAM_MIR_48002346;Name=dme-miR-92b" - "RNAmicro=f:21477120_t:21477239_strand:+_p:0.999146" - - - "miRBase=dme-mir-92b\|2e-52" - "Flybase=FBgn0067681:mir-92b:microRNA_encoding_gene\|8e-07"	12893	21,477,120 – 21,477,230	+	6	120	80.62	-2.55	0.95	0.980806
8010	3R_DroMel_CAF1	21,479,789 – 21,479,900	- - - - - - - - -	12894	21,479,789 – 21,479,900	+	6	120	73.80	-1.47	0.60	0.746427
8011	3R_DroMel_CAF1	21,486,280 – 21,486,370	- - - - - - - - -	12895	21,486,280 – 21,486,370	-	5	106	77.40	-2.14	0.52	0.905765
8012	3R_DroMel_CAF1	21,488,987 – 21,489,116	- - - "knownCDS=Parent=FBtr0084898;Name=CG5053-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5053-RA" - - - - -	12896	21,488,987 – 21,489,083	+	6	96	89.38	-3.09	0.74	0.530615
8012	3R_DroMel_CAF1	21,488,987 – 21,489,116		12897	21,489,018 – 21,489,116	-	6	101	80.54	-2.12	0.52	0.574876
8013	3R_DroMel_CAF1	21,489,876 – 21,489,969	- - - "knownCDS=Parent=FBtr0084898;Name=CG5053-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5053-RA" - - - - -	12898	21,489,876 – 21,489,969	+	6	93	81.92	-1.82	0.63	0.583524
8014	3R_DroMel_CAF1	21,499,911 – 21,500,001	- - - - - - - - -	12899	21,499,911 – 21,500,001	+	6	100	79.02	-1.45	0.60	0.509764
8015	3R_DroMel_CAF1	21,501,199 – 21,501,293	- - - "knownCDS=Parent=FBtr0084899;Name=Lgr3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31096-RA" - - - - -	12900	21,501,199 – 21,501,293	-	6	111	79.39	-1.66	0.70	0.840939
8016	3R_DroMel_CAF1	21,507,814 – 21,507,927	- - - "knownCDS=Parent=FBtr0084901;Name=CG5028-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5028-RA" - - - - -	12901	21,507,814 – 21,507,927	-	6	119	82.61	-1.85	0.69	0.643597
8017	3R_DroMel_CAF1	21,508,439 – 21,508,564	- - - - - - - - -	12902	21,508,439 – 21,508,547	+	5	114	86.29	-3.87	0.79	0.998948
				12903	21,508,439 – 21,508,547	-	5	114	86.29	-2.25	0.71	0.859930
				12904	21,508,473 – 21,508,564	+	5	93	90.20	-3.47	0.81	0.999082
				12905	21,508,473 – 21,508,564	-	5	93	90.20	-1.61	0.87	0.912204
8018	3R_DroMel_CAF1	21,510,095 – 21,510,242	- - - "knownCDS=Parent=FBtr0084932;Name=RpL27-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4759-RA" - - - - -	12906	21,510,095 – 21,510,215	-	6	120	88.28	-3.55	0.73	0.739830
8018	3R_DroMel_CAF1	21,510,095 – 21,510,242		12907	21,510,135 – 21,510,242	-	6	120	82.33	-1.37	0.82	0.586704
8019	3R_DroMel_CAF1	21,517,999 – 21,518,110	- - - - - - - - -	12908	21,517,999 – 21,518,110	+	5	120	82.71	-1.86	0.73	0.786037
8020	3R_DroMel_CAF1	21,531,652 – 21,531,744	- - - "knownCDS=texon11643;Parent=CG_NCBI_GNO_32403527, CG_NCBI_GNO_32403789, CG_BATZ_CON_47011084" - - - - -	12909	21,531,652 – 21,531,744	+	6	92	85.14	-1.66	0.79	0.500000
8021	3R_DroMel_CAF1	21,535,786 – 21,535,892	- - - "knownCDS=Parent=FBtr0084927;Name=LpR2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31092-RA" - - - - -	12910	21,535,786 – 21,535,892	-	6	109	79.19	-1.16	0.75	0.665923
8022	3R_DroMel_CAF1	21,546,570 – 21,546,700	- - - - - - - - -	12911	21,546,570 – 21,546,676	-	5	107	86.56	-1.75	0.69	0.538412
				12912	21,546,605 – 21,546,700	+	5	98	89.67	-1.67	0.72	0.500000
				12913	21,546,605 – 21,546,700	-	5	98	89.67	-1.92	0.77	0.845767
8023	3R_DroMel_CAF1	21,547,382 – 21,547,472	- - "RNAmicro=f:21547382_t:21547490_strand:+_p:0.800036" - - - - - -	12914	21,547,382 – 21,547,472	-	6	109	73.06	-2.52	0.56	0.994406
8024	3R_DroMel_CAF1	21,548,486 – 21,548,577	- - - - - - - - -	12915	21,548,486 – 21,548,577	-	6	97	79.44	-1.10	0.73	0.586080
8025	3R_DroMel_CAF1	21,548,614 – 21,548,747	- - - - - - - - -	12916	21,548,614 – 21,548,713	-	6	104	79.17	-1.97	0.60	0.827702
8025	3R_DroMel_CAF1	21,548,614 – 21,548,747	- - - - - - - - -	12917	21,548,648 – 21,548,747	-	6	109	81.17	-2.05	0.54	0.526956
8026	3R_DroMel_CAF1	21,550,971 – 21,551,113	- - - - - - - - -	12918	21,550,971 – 21,551,077	+	6	108	82.34	-1.25	0.78	0.500000
8026	3R_DroMel_CAF1	21,550,971 – 21,551,113	- - - - - - - - -	12919	21,551,003 – 21,551,113	+	6	112	80.93	-1.70	0.65	0.676491
8027	3R_DroMel_CAF1	21,563,262 – 21,563,359	- - - - - - - - -	12920	21,563,262 – 21,563,359	-	3	97	79.93	-1.01	1.02	0.998536
8028	3R_DroMel_CAF1	21,567,612 – 21,567,716	- - - - - - - - -	12921	21,567,612 – 21,567,716	+	6	106	90.91	-1.75	0.90	0.923639
8029	3R_DroMel_CAF1	21,568,151 – 21,568,264	- - - "knownCDS=Parent=FBtr0084925, FBtr0084926;Name=LpR1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31094-RA, FlyBase+Annotation+IDs:CG31094-RB" - - - - -	12922	21,568,151 – 21,568,264	-	6	118	79.90	-1.40	0.73	0.731121
8030	3R_DroMel_CAF1	21,568,773 – 21,568,905	- - - - - - - - -	12923	21,568,773 – 21,568,884	+	6	120	82.64	-1.77	0.67	0.579045
				12924	21,568,773 – 21,568,884	-	6	120	82.64	-2.62	0.64	0.778379
				12925	21,568,810 – 21,568,905	+	6	116	76.01	-2.03	0.53	0.895271
				12926	21,568,810 – 21,568,905	-	6	116	76.01	-2.59	0.61	0.990244
8031	3R_DroMel_CAF1	21,572,325 – 21,572,423	- - - - - - - - -	12927	21,572,325 – 21,572,423	+	5	100	91.50	-2.34	0.69	0.508398
8032	3R_DroMel_CAF1	21,572,503 – 21,572,600	- - - - - - - - -	12928	21,572,503 – 21,572,600	-	6	120	72.90	-1.64	0.56	0.828696
8033	3R_DroMel_CAF1	21,575,671 – 21,575,805	- - - - - - - - -	12929	21,575,671 – 21,575,770	+	5	104	74.19	-2.92	0.58	0.999466
				12930	21,575,671 – 21,575,770	-	5	104	74.19	-3.80	0.59	0.999923
				12931	21,575,702 – 21,575,805	+	6	110	79.56	-2.31	0.48	0.687969
				12932	21,575,702 – 21,575,805	-	6	110	79.56	-2.58	0.46	0.803750
8034	3R_DroMel_CAF1	21,586,687 – 21,586,825	- - - - - - - - -	12933	21,586,687 – 21,586,799	+	5	114	83.56	-2.73	0.49	0.722025
				12934	21,586,720 – 21,586,825	+	5	118	78.12	-2.70	0.55	0.992917
				12935	21,586,720 – 21,586,825	-	5	118	78.12	-1.79	0.55	0.588077
8035	3R_DroMel_CAF1	21,587,374 – 21,587,465	- - - - - - - - -	12936	21,587,374 – 21,587,465	-	5	93	92.77	-2.29	0.83	0.991405
8036	3R_DroMel_CAF1	21,595,736 – 21,595,836	- - - - - - - - -	12937	21,595,736 – 21,595,836	+	6	114	78.86	-1.20	0.68	0.579969
8037	3R_DroMel_CAF1	21,599,630 – 21,599,748	- - - "knownCDS=Parent=FBtr0084924;Name=CG17198-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17198-RA" - - - - -	12938	21,599,630 – 21,599,748	+	5	120	86.45	-1.69	0.68	0.500000
8037	3R_DroMel_CAF1	21,599,630 – 21,599,748		12939	21,599,630 – 21,599,748	-	5	120	86.45	-1.58	0.76	0.573782
8038	3R_DroMel_CAF1	21,602,041 – 21,602,161	- - - "knownCDS=Parent=FBtr0084921;Name=CG17195-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17195-RA" - - - - -	12940	21,602,041 – 21,602,161	+	6	120	75.44	-1.80	0.46	0.500000
8039	3R_DroMel_CAF1	21,607,162 – 21,607,272	- - - - - - - - -	12941	21,607,162 – 21,607,272	+	5	112	95.64	-2.55	0.95	0.999910
8039	3R_DroMel_CAF1	21,607,162 – 21,607,272	- - - - - - - - -	12942	21,607,162 – 21,607,272	-	5	112	95.64	-2.27	0.83	0.977734
8040	3R_DroMel_CAF1	21,613,670 – 21,613,761	- - - - - - - - -	12943	21,613,670 – 21,613,761	+	5	92	94.22	-1.60	0.95	0.988411
8041	3R_DroMel_CAF1	21,615,166 – 21,615,265	- - - - - - - - -	12944	21,615,166 – 21,615,265	-	5	99	85.13	-2.24	0.74	0.911549
8042	3R_DroMel_CAF1	21,615,305 – 21,615,414	- - - - - - - - -	12945	21,615,305 – 21,615,414	-	5	120	76.30	-2.39	0.37	0.978052
8043	3R_DroMel_CAF1	21,617,634 – 21,617,725	- - - - - - - - -	12946	21,617,634 – 21,617,725	-	4	105	87.07	-1.37	0.82	0.509899
8044	3R_DroMel_CAF1	21,618,762 – 21,618,880	- - - - - - - - -	12947	21,618,762 – 21,618,880	-	6	120	84.57	-2.97	0.71	0.750547
8045	3R_DroMel_CAF1	21,621,985 – 21,622,097	- - - - - - - - -	12948	21,621,985 – 21,622,097	+	6	113	79.51	-2.20	0.48	0.580892
8046	3R_DroMel_CAF1	21,622,478 – 21,622,586	- - - - - - - - -	12949	21,622,478 – 21,622,586	-	6	120	81.94	-1.54	0.69	0.590065
8047	3R_DroMel_CAF1	21,623,927 – 21,624,017	- - - - - - - - -	12950	21,623,927 – 21,624,017	+	6	109	81.52	-1.64	0.77	0.753617
8048	3R_DroMel_CAF1	21,624,072 – 21,624,165	- - - - - - - - -	12951	21,624,072 – 21,624,165	-	6	95	83.76	-2.65	0.62	0.583952
8049	3R_DroMel_CAF1	21,627,237 – 21,627,462	- - - - - - - - -	12952	21,627,237 – 21,627,345	-	5	119	84.75	-1.88	0.70	0.697059
				12953	21,627,277 – 21,627,382	-	5	119	77.68	-2.68	0.52	0.993066
				12954	21,627,317 – 21,627,422	+	3	106	68.63	-1.73	0.63	0.991606
				12955	21,627,317 – 21,627,422	-	3	106	68.63	-1.49	0.66	0.977261
				12956	21,627,345 – 21,627,462	-	5	120	83.06	-2.26	0.68	0.893563
8050	3R_DroMel_CAF1	21,627,607 – 21,627,717	- - - - - - - - -	12957	21,627,607 – 21,627,717	-	6	120	83.47	-2.64	0.80	0.901968
8051	3R_DroMel_CAF1	21,628,342 – 21,628,444	- - - - - - - - -	12958	21,628,342 – 21,628,444	+	4	106	93.24	-1.92	0.93	0.941286
8052	3R_DroMel_CAF1	21,631,046 – 21,631,188	- - - - - - - - -	12959	21,631,046 – 21,631,151	+	5	105	92.53	-1.89	0.78	0.845517
				12960	21,631,046 – 21,631,151	-	5	105	92.53	-1.55	0.77	0.551527
				12961	21,631,086 – 21,631,188	-	5	105	91.62	-2.01	0.74	0.686377
8053	3R_DroMel_CAF1	21,632,963 – 21,633,119	- - - - - - - - -	12962	21,632,963 – 21,633,079	+	6	120	96.31	-2.11	0.89	0.986305
				12963	21,632,963 – 21,633,079	-	6	120	96.31	-2.11	0.90	0.992366
				12964	21,633,003 – 21,633,119	+	5	116	98.62	-1.97	0.96	0.994311
8054	3R_DroMel_CAF1	21,633,752 – 21,633,868	- - - - - - - - -	12965	21,633,752 – 21,633,868	-	5	120	81.72	-2.31	0.63	0.907383
8055	3R_DroMel_CAF1	21,635,747 – 21,635,963	- - - - - - - - -	12966	21,635,747 – 21,635,867	+	5	120	97.17	-1.51	0.98	0.974309
				12967	21,635,747 – 21,635,867	-	5	120	97.17	-1.97	0.95	0.997400
				12968	21,635,867 – 21,635,963	+	5	111	73.46	-1.60	0.14	0.713345
8056	3R_DroMel_CAF1	21,640,221 – 21,640,330	- - - - - - - - -	12969	21,640,221 – 21,640,330	+	6	120	77.78	-1.96	0.70	0.948426
8056	3R_DroMel_CAF1	21,640,221 – 21,640,330	- - - - - - - - -	12970	21,640,221 – 21,640,330	-	6	120	77.78	-1.90	0.52	0.650726
8057	3R_DroMel_CAF1	21,640,433 – 21,640,535	- - - - - - - - -	12971	21,640,433 – 21,640,535	+	5	103	96.48	-1.63	0.86	0.869346
8058	3R_DroMel_CAF1	21,640,642 – 21,640,738	- - - - - - - - -	12972	21,640,642 – 21,640,738	-	6	120	82.76	-2.28	0.62	0.620276
8059	3R_DroMel_CAF1	21,640,846 – 21,640,938	- - - - - - - - -	12973	21,640,846 – 21,640,938	+	6	109	82.58	-2.71	0.60	0.752449
8059	3R_DroMel_CAF1	21,640,846 – 21,640,938	- - - - - - - - -	12974	21,640,846 – 21,640,938	-	6	109	82.58	-3.71	0.59	0.919680
8060	3R_DroMel_CAF1	21,641,498 – 21,641,658	- - - "knownCDS=Parent=FBtr0084905;Name=CG14354-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14354-RA" - - - - -	12975	21,641,498 – 21,641,618	+	6	120	88.00	-1.76	0.83	0.611662
				12976	21,641,538 – 21,641,658	+	6	120	79.39	-1.91	0.62	0.822133
				12977	21,641,538 – 21,641,658	-	6	120	79.39	-1.60	0.68	0.794716
8061	3R_DroMel_CAF1	21,643,511 – 21,643,607	- - - - - - - - -	12978	21,643,511 – 21,643,607	+	6	120	88.78	-1.61	0.89	0.790110
8062	3R_DroMel_CAF1	21,643,681 – 21,643,803	- - - - - - - - -	12979	21,643,681 – 21,643,780	-	6	120	75.85	-2.88	0.53	0.994214
				12980	21,643,709 – 21,643,803	+	6	120	79.35	-1.79	0.62	0.774722
				12981	21,643,709 – 21,643,803	-	6	120	79.35	-3.15	0.61	0.979936
8063	3R_DroMel_CAF1	21,650,658 – 21,650,765	- - - - - - - - -	12982	21,650,658 – 21,650,765	-	5	117	93.33	-1.91	0.88	0.989660
8064	3R_DroMel_CAF1	21,652,819 – 21,652,912	- - - - - - - - -	12983	21,652,819 – 21,652,912	+	6	118	82.09	-2.61	0.56	0.720688
8065	3R_DroMel_CAF1	21,653,456 – 21,653,562	- - - - - - - - -	12984	21,653,456 – 21,653,562	-	5	116	78.94	-1.64	0.62	0.549934
8066	3R_DroMel_CAF1	21,653,905 – 21,654,024	- - - - - - - - -	12985	21,653,905 – 21,654,024	-	4	119	78.43	-1.94	0.60	0.737318
8067	3R_DroMel_CAF1	21,654,655 – 21,654,790	- - - - - - - - -	12986	21,654,655 – 21,654,754	+	6	120	82.14	-3.42	0.82	0.965184
8067	3R_DroMel_CAF1	21,654,655 – 21,654,790	- - - - - - - - -	12987	21,654,686 – 21,654,790	+	6	120	78.54	-1.45	0.70	0.791401
8068	3R_DroMel_CAF1	21,654,959 – 21,655,067	- - - - - - - - -	12988	21,654,959 – 21,655,067	+	5	116	82.60	-2.53	0.54	0.841886
8068	3R_DroMel_CAF1	21,654,959 – 21,655,067	- - - - - - - - -	12989	21,654,959 – 21,655,067	-	5	116	82.60	-2.72	0.56	0.915928
8069	3R_DroMel_CAF1	21,658,070 – 21,658,163	- - - - - - - - -	12990	21,658,070 – 21,658,163	-	3	108	82.72	-2.27	0.58	0.500000
8070	3R_DroMel_CAF1	21,673,792 – 21,673,966	- - - - - - - - -	12991	21,673,792 – 21,673,903	+	5	113	86.67	-1.55	0.73	0.513992
8070	3R_DroMel_CAF1	21,673,792 – 21,673,966	- - - - - - - - -	12992	21,673,868 – 21,673,966	+	5	102	78.19	-2.35	0.61	0.975923
8071	3R_DroMel_CAF1	21,674,681 – 21,674,772	- - - - - - - - -	12993	21,674,681 – 21,674,772	+	4	94	86.48	-1.69	0.83	0.766644
8072	3R_DroMel_CAF1	21,674,949 – 21,675,047	- - - - - - - - -	12994	21,674,949 – 21,675,047	+	6	99	95.86	-1.35	0.89	0.711509
8073	3R_DroMel_CAF1	21,675,206 – 21,675,344	- - - - - - - - -	12995	21,675,206 – 21,675,311	+	5	105	94.86	-2.34	0.87	0.998032
				12996	21,675,206 – 21,675,311	-	5	105	94.86	-2.83	0.89	0.999740
				12997	21,675,236 – 21,675,344	+	5	108	95.00	-2.31	0.83	0.989116
				12998	21,675,236 – 21,675,344	-	5	108	95.00	-3.23	0.85	0.999436
8074	3R_DroMel_CAF1	21,681,215 – 21,681,306	- - - - - - - - -	12999	21,681,215 – 21,681,306	+	6	100	76.42	-2.14	0.59	0.956090
8075	3R_DroMel_CAF1	21,685,250 – 21,685,340	- - - - - - - - -	13000	21,685,250 – 21,685,340	+	6	94	73.26	-2.18	0.29	0.554467
8075	3R_DroMel_CAF1	21,685,250 – 21,685,340	- - - - - - - - -	13001	21,685,250 – 21,685,340	-	6	94	73.26	-2.23	0.31	0.711214
8076	3R_DroMel_CAF1	21,686,981 – 21,687,117	- - - - - - - - -	13002	21,686,981 – 21,687,090	+	6	109	88.15	-3.17	0.79	0.903132
				13003	21,686,981 – 21,687,090	-	6	109	88.15	-3.94	0.83	0.990963
				13004	21,687,020 – 21,687,117	+	6	98	89.78	-2.92	0.75	0.548696
8077	3R_DroMel_CAF1	21,689,966 – 21,690,067	- - - - - - - - -	13005	21,689,966 – 21,690,067	+	6	102	77.96	-2.02	0.60	0.903782
8077	3R_DroMel_CAF1	21,689,966 – 21,690,067	- - - - - - - - -	13006	21,689,966 – 21,690,067	-	6	102	77.96	-2.16	0.59	0.925995
8078	3R_DroMel_CAF1	21,692,519 – 21,692,633	- - - - - - - - -	13007	21,692,519 – 21,692,633	-	3	114	92.98	-2.50	0.85	0.847748
8079	3R_DroMel_CAF1	21,696,966 – 21,697,061	- - - - - - - - -	13008	21,696,966 – 21,697,061	+	5	95	93.05	-3.19	0.88	0.999883
8079	3R_DroMel_CAF1	21,696,966 – 21,697,061	- - - - - - - - -	13009	21,696,966 – 21,697,061	-	5	95	93.05	-2.41	0.92	0.999770
8080	3R_DroMel_CAF1	21,703,928 – 21,704,046	- - - - - - - - -	13010	21,703,928 – 21,704,046	+	4	118	81.12	-1.96	0.58	0.559108
8081	3R_DroMel_CAF1	21,704,291 – 21,704,389	- - - - - - - - -	13011	21,704,291 – 21,704,389	+	5	116	83.52	-2.96	0.69	0.984683
8082	3R_DroMel_CAF1	21,706,812 – 21,706,902	- - - - - - - - -	13012	21,706,812 – 21,706,902	-	6	109	77.44	-1.58	0.56	0.520030
8083	3R_DroMel_CAF1	21,707,213 – 21,707,332	- - - - - - - - -	13013	21,707,213 – 21,707,332	-	4	119	74.16	-1.58	0.64	0.665137
8084	3R_DroMel_CAF1	21,709,103 – 21,709,216	- - - - - - - - -	13014	21,709,103 – 21,709,216	+	5	120	87.94	-2.04	0.69	0.649527
8084	3R_DroMel_CAF1	21,709,103 – 21,709,216	- - - - - - - - -	13015	21,709,103 – 21,709,216	-	5	120	87.94	-1.87	0.74	0.739050
8085	3R_DroMel_CAF1	21,709,643 – 21,709,745	- - - - - - - - -	13016	21,709,643 – 21,709,745	+	5	102	99.02	-1.28	0.95	0.615309
8086	3R_DroMel_CAF1	21,710,952 – 21,711,057	- - - - - - - - -	13017	21,710,952 – 21,711,057	+	5	112	88.69	-1.59	0.77	0.636894
8087	3R_DroMel_CAF1	21,712,012 – 21,712,106	- - - "knownCDS=Parent=FBtr0084909, FBtr0084910;Name=CG17370-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17370-RA, FlyBase+Annotation+IDs:CG17370-RB" - - - - -	13018	21,712,012 – 21,712,106	-	6	95	81.27	-1.70	0.60	0.516082
8088	3R_DroMel_CAF1	21,716,087 – 21,716,207	- - - - - - - - -	13019	21,716,087 – 21,716,207	-	4	120	90.48	-1.41	0.82	0.528673
8089	3R_DroMel_CAF1	21,720,165 – 21,720,285	- - - "knownCDS=Parent=FBtr0084938;Name=CG5913-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5913-RA" - - - - -	13020	21,720,165 – 21,720,285	-	6	120	80.72	-1.41	0.66	0.575503
8090	3R_DroMel_CAF1	21,731,095 – 21,731,186	- - - - - - - - -	13021	21,731,095 – 21,731,186	+	5	92	82.58	-1.68	0.66	0.555292
8090	3R_DroMel_CAF1	21,731,095 – 21,731,186	- - - - - - - - -	13022	21,731,095 – 21,731,186	-	5	92	82.58	-2.51	0.61	0.917897
8091	3R_DroMel_CAF1	21,731,698 – 21,731,795	- - - - - - - - -	13023	21,731,698 – 21,731,795	+	4	112	86.05	-2.88	0.61	0.832603
8092	3R_DroMel_CAF1	21,731,828 – 21,731,923	- - - - - - - - -	13024	21,731,828 – 21,731,923	+	6	104	79.69	-1.98	0.59	0.774688
8093	3R_DroMel_CAF1	21,733,365 – 21,733,497	- - - "knownCDS=Parent=FBtr0084943;Name=CG31090-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31090-RA" - - - - -	13025	21,733,365 – 21,733,461	+	6	96	71.89	-1.99	0.47	0.914610
				13026	21,733,365 – 21,733,461	-	6	96	71.89	-1.78	0.62	0.959513
				13027	21,733,404 – 21,733,497	+	6	96	78.11	-1.51	0.60	0.615223
				13028	21,733,404 – 21,733,497	-	6	96	78.11	-2.24	0.58	0.930850
8094	3R_DroMel_CAF1	21,733,699 – 21,733,804	- - - "knownCDS=Parent=FBtr0084943;Name=CG31090-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31090-RA" - - - - -	13029	21,733,699 – 21,733,804	+	6	120	76.47	-2.06	0.60	0.943992
8094	3R_DroMel_CAF1	21,733,699 – 21,733,804		13030	21,733,699 – 21,733,804	-	6	120	76.47	-2.24	0.43	0.792440
8095	3R_DroMel_CAF1	21,737,398 – 21,737,511	- - - - - - - - -	13031	21,737,398 – 21,737,511	+	3	114	66.56	-1.36	0.59	0.789278
8095	3R_DroMel_CAF1	21,737,398 – 21,737,511	- - - - - - - - -	13032	21,737,398 – 21,737,511	-	3	114	66.56	-1.77	0.52	0.866582
8096	3R_DroMel_CAF1	21,739,153 – 21,739,275	- - - - - - - - -	13033	21,739,153 – 21,739,258	+	5	112	86.75	-2.47	0.81	0.985661
8096	3R_DroMel_CAF1	21,739,153 – 21,739,275	- - - - - - - - -	13034	21,739,185 – 21,739,275	+	5	97	79.87	-2.05	0.68	0.911025
8097	3R_DroMel_CAF1	21,744,373 – 21,744,478	- - - - - - - - -	13035	21,744,373 – 21,744,478	+	6	111	82.55	-1.99	0.72	0.735161
8098	3R_DroMel_CAF1	21,744,558 – 21,744,654	- - - - - - - - -	13036	21,744,558 – 21,744,654	+	6	96	81.11	-2.26	0.56	0.692976
8099	3R_DroMel_CAF1	21,746,847 – 21,746,943	- - - - - - - - -	13037	21,746,847 – 21,746,943	-	6	102	75.51	-2.39	0.66	0.988798
8100	3R_DroMel_CAF1	21,746,988 – 21,747,086	- - - "knownCDS=Parent=FBtr0084984;Name=CG14546-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14546-RA" - - - - -	13038	21,746,988 – 21,747,086	+	6	106	76.09	-1.86	0.52	0.752805
8101	3R_DroMel_CAF1	21,747,362 – 21,747,471	- - - "knownCDS=Parent=FBtr0084984;Name=CG14546-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14546-RA" - - - - -	13039	21,747,362 – 21,747,471	+	5	109	92.39	-1.79	0.84	0.948677
8102	3R_DroMel_CAF1	21,750,033 – 21,750,153	- - - - - - - - -	13040	21,750,033 – 21,750,153	-	6	120	82.00	-1.75	0.64	0.586703
8103	3R_DroMel_CAF1	21,756,845 – 21,756,936	- - - - - - - - -	13041	21,756,845 – 21,756,936	-	6	118	76.87	-1.96	0.51	0.748008
8104	3R_DroMel_CAF1	21,760,102 – 21,760,205	- - - - - - - - -	13042	21,760,102 – 21,760,205	-	6	105	73.78	-1.60	0.65	0.925223
8105	3R_DroMel_CAF1	21,760,695 – 21,760,792	- - - - - - - - -	13043	21,760,695 – 21,760,792	-	6	111	82.51	-1.92	0.74	0.744848
8106	3R_DroMel_CAF1	21,766,316 – 21,766,423	- - - - - - - - -	13044	21,766,316 – 21,766,423	-	5	120	90.61	-1.35	0.94	0.862809
8107	3R_DroMel_CAF1	21,768,412 – 21,768,527	- - - - - - - - -	13045	21,768,412 – 21,768,527	+	6	120	80.00	-1.51	0.61	0.514928
8108	3R_DroMel_CAF1	21,780,251 – 21,780,344	- - - - - - - - -	13046	21,780,251 – 21,780,344	-	3	93	94.98	-2.29	0.93	0.917082
8109	3R_DroMel_CAF1	21,780,373 – 21,780,478	- - - - - - - - -	13047	21,780,373 – 21,780,478	-	5	114	72.10	-1.70	0.10	0.768389
8110	3R_DroMel_CAF1	21,785,424 – 21,785,525	- - - "knownCDS=Parent=FBtr0084948;Name=CG14540-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14540-RA" - - - - -	13048	21,785,424 – 21,785,525	-	6	105	85.93	-1.65	0.81	0.500000
8111	3R_DroMel_CAF1	21,789,474 – 21,789,570	- - - - - - - - -	13049	21,789,474 – 21,789,570	-	5	115	79.91	-1.84	0.68	0.803312
8112	3R_DroMel_CAF1	21,791,317 – 21,791,437	- - "RNAmicro=f:21791317_t:21791436_strand:+_p:0.999442" "knownCDS=Parent=FBtr0084949;Name=boss-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8285-RA" - - - - -	13050	21,791,317 – 21,791,437	+	6	120	86.11	-2.89	0.78	0.821157
8113	3R_DroMel_CAF1	21,804,152 – 21,804,269	- - - "knownCDS=Parent=FBtr0084951;Name=CG8968-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8968-RA" - - - - -	13051	21,804,152 – 21,804,269	-	6	117	75.95	-1.66	0.52	0.543251
8114	3R_DroMel_CAF1	21,806,764 – 21,806,860	- - - "knownCDS=Parent=FBtr0084951;Name=CG8968-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8968-RA" - - - - -	13052	21,806,764 – 21,806,860	+	6	96	76.71	-1.52	0.73	0.914363
8114	3R_DroMel_CAF1	21,806,764 – 21,806,860		13053	21,806,764 – 21,806,860	-	6	96	76.71	-1.48	0.63	0.740595
8115	3R_DroMel_CAF1	21,809,147 – 21,809,238	- - - - - - - - -	13054	21,809,147 – 21,809,238	-	5	91	94.18	-1.85	0.92	0.995432
8116	3R_DroMel_CAF1	21,810,956 – 21,811,076	- - - "knownCDS=Parent=FBtr0084952, FBtr0084953, FBtr0100113;Name=Nf1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8318-RB, FlyBase+Annotation+IDs:CG8318-RC, FlyBase+Annotation+IDs:CG8318-RD" - - - - -	13055	21,810,956 – 21,811,076	-	6	120	79.17	-1.77	0.61	0.762751
8117	3R_DroMel_CAF1	21,811,685 – 21,811,816	- - - "knownCDS=Parent=FBtr0084952, FBtr0084953, FBtr0100113;Name=Nf1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8318-RB, FlyBase+Annotation+IDs:CG8318-RC, FlyBase+Annotation+IDs:CG8318-RD" - - - - -	13056	21,811,685 – 21,811,798	+	6	118	81.21	-1.79	0.68	0.739173
				13057	21,811,685 – 21,811,798	-	6	118	81.21	-2.04	0.62	0.743609
				13058	21,811,725 – 21,811,816	+	6	104	77.11	-1.56	0.69	0.889559
8118	3R_DroMel_CAF1	21,817,112 – 21,817,213	- - - - - - - - -	13059	21,817,112 – 21,817,213	-	6	103	80.03	-1.42	0.71	0.705540
8119	3R_DroMel_CAF1	21,818,103 – 21,818,205	- - - "knownCDS=Parent=FBtr0084952, FBtr0100113;Name=Nf1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8318-RB, FlyBase+Annotation+IDs:CG8318-RD" - - - - -	13060	21,818,103 – 21,818,205	+	6	120	78.40	-1.91	0.66	0.907973
8120	3R_DroMel_CAF1	21,821,962 – 21,822,060	- - - - - - - - -	13061	21,821,962 – 21,822,060	-	5	114	90.41	-1.85	0.76	0.752359
8121	3R_DroMel_CAF1	21,822,376 – 21,822,486	- - - - - - - - -	13062	21,822,376 – 21,822,486	+	4	120	77.30	-3.32	0.52	0.996537
8122	3R_DroMel_CAF1	21,823,073 – 21,823,201	- - - - - - - - -	13063	21,823,073 – 21,823,187	-	5	116	87.07	-2.04	0.90	0.983618
8122	3R_DroMel_CAF1	21,823,073 – 21,823,201	- - - - - - - - -	13064	21,823,108 – 21,823,201	-	5	93	97.96	-1.24	0.95	0.683148
8123	3R_DroMel_CAF1	21,826,116 – 21,826,218	- - - "knownCDS=Parent=FBtr0084955;Name=HLHmgamma-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8333-RA" - - - - -	13065	21,826,116 – 21,826,218	-	6	118	78.49	-1.47	0.62	0.632903
8124	3R_DroMel_CAF1	21,828,275 – 21,828,407	- - - - - - - - -	13066	21,828,275 – 21,828,374	-	6	115	72.36	-0.72	0.79	0.792155
8124	3R_DroMel_CAF1	21,828,275 – 21,828,407	- - - - - - - - -	13067	21,828,303 – 21,828,407	-	6	116	82.43	-2.45	0.86	0.942451
8125	3R_DroMel_CAF1	21,828,894 – 21,828,998	- - - - - - - - -	13068	21,828,894 – 21,828,998	+	6	108	88.58	-1.84	0.86	0.779397
8126	3R_DroMel_CAF1	21,831,541 – 21,831,650	- - - - - - - - -	13069	21,831,541 – 21,831,650	-	6	113	75.56	-2.06	0.71	0.981362
8127	3R_DroMel_CAF1	21,834,160 – 21,834,273	- - - - - - - - -	13070	21,834,160 – 21,834,251	+	6	104	79.55	-1.60	0.71	0.819499
8127	3R_DroMel_CAF1	21,834,160 – 21,834,273	- - - - - - - - -	13071	21,834,181 – 21,834,273	-	6	95	86.98	-1.29	1.00	0.887273
8128	3R_DroMel_CAF1	21,835,629 – 21,835,734	- - - - - - - - -	13072	21,835,629 – 21,835,734	-	6	105	90.41	-1.86	0.82	0.540844
8129	3R_DroMel_CAF1	21,838,481 – 21,838,573	- - - - - - - - -	13073	21,838,481 – 21,838,573	-	6	94	77.13	-0.96	0.77	0.687879
8130	3R_DroMel_CAF1	21,843,143 – 21,843,243	- - - - - - - - -	13074	21,843,143 – 21,843,243	-	6	120	83.72	-2.18	0.68	0.591815
8131	3R_DroMel_CAF1	21,846,225 – 21,846,317	- - - - - - - - -	13075	21,846,225 – 21,846,317	+	6	118	74.50	-1.34	0.84	0.954552
8132	3R_DroMel_CAF1	21,846,411 – 21,846,573	- - - - - - - - -	13076	21,846,411 – 21,846,510	+	6	108	96.41	-3.12	0.98	0.999990
				13077	21,846,411 – 21,846,510	-	6	108	96.41	-2.08	0.99	0.999861
				13078	21,846,430 – 21,846,539	+	6	118	90.39	-2.44	0.97	0.999569
				13079	21,846,430 – 21,846,539	-	6	118	90.39	-1.77	0.85	0.711585
				13080	21,846,470 – 21,846,573	+	5	114	77.45	-2.82	0.62	0.997699
				13081	21,846,470 – 21,846,573	-	5	114	77.45	-2.06	0.54	0.869947
8133	3R_DroMel_CAF1	21,847,705 – 21,847,795	- - - - - - - - -	13082	21,847,705 – 21,847,795	+	6	110	76.10	-1.54	0.77	0.943849
8134	3R_DroMel_CAF1	21,849,583 – 21,849,673	- - - - - - - - -	13083	21,849,583 – 21,849,673	-	6	96	74.45	-1.94	0.73	0.983246
8135	3R_DroMel_CAF1	21,850,728 – 21,850,819	- - - - - - - - -	13084	21,850,728 – 21,850,819	-	6	92	95.47	-2.10	0.96	0.999550
8136	3R_DroMel_CAF1	21,854,694 – 21,854,826	- - - - - - - - -	13085	21,854,694 – 21,854,811	-	6	118	79.63	-1.90	0.53	0.540321
				13086	21,854,732 – 21,854,826	+	5	94	96.81	-1.68	0.97	0.991547
				13087	21,854,732 – 21,854,826	-	5	94	96.81	-3.97	0.95	0.999948
8137	3R_DroMel_CAF1	21,855,576 – 21,855,673	- - - - - - - - -	13088	21,855,576 – 21,855,673	-	5	97	95.35	-2.34	0.78	0.871732
8138	3R_DroMel_CAF1	21,856,293 – 21,856,397	- - - - - - - - -	13089	21,856,293 – 21,856,397	+	6	120	85.90	-1.64	0.83	0.569012
8139	3R_DroMel_CAF1	21,859,026 – 21,859,158	- - - - - - - - -	13090	21,859,026 – 21,859,128	+	3	103	82.01	-2.62	0.90	0.993231
				13091	21,859,026 – 21,859,128	-	3	103	82.01	-1.46	0.81	0.603295
				13092	21,859,066 – 21,859,158	+	5	120	68.28	-1.98	0.33	0.813663
8140	3R_DroMel_CAF1	21,862,066 – 21,862,159	- - - - - - - - -	13093	21,862,066 – 21,862,159	+	6	120	82.11	-1.40	0.76	0.591649
8140	3R_DroMel_CAF1	21,862,066 – 21,862,159	- - - - - - - - -	13094	21,862,066 – 21,862,159	-	6	120	82.11	-1.79	0.68	0.658363
8141	3R_DroMel_CAF1	21,862,856 – 21,862,965	- - - "knownCDS=Parent=FBtr0084960;Name=HLHm7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8361-RA" - - - - -	13095	21,862,856 – 21,862,965	+	6	119	78.05	-1.49	0.74	0.876354
8142	3R_DroMel_CAF1	21,882,407 – 21,882,524	- - - "knownCDS=Parent=FBtr0084968;Name=CG14543-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14543-RA" - - - - -	13096	21,882,407 – 21,882,524	+	6	120	79.59	-2.16	0.53	0.744179
8143	3R_DroMel_CAF1	21,886,458 – 21,886,563	- - - - - - - - -	13097	21,886,458 – 21,886,563	+	5	107	88.55	-2.08	0.84	0.974102
8144	3R_DroMel_CAF1	21,893,006 – 21,893,108	- - - - - - - - -	13098	21,893,006 – 21,893,108	+	6	114	75.96	-1.66	0.65	0.909142
8144	3R_DroMel_CAF1	21,893,006 – 21,893,108	- - - - - - - - -	13099	21,893,006 – 21,893,108	-	6	114	75.96	-1.46	0.61	0.692903
8145	3R_DroMel_CAF1	21,897,399 – 21,897,489	- - - - - - - - -	13100	21,897,399 – 21,897,489	-	5	90	92.00	-2.38	0.84	0.996216
8146	3R_DroMel_CAF1	21,898,920 – 21,899,015	- - - - - - - - -	13101	21,898,920 – 21,899,015	-	6	111	80.48	-2.06	0.64	0.831732
8147	3R_DroMel_CAF1	21,903,164 – 21,903,255	- - - "knownCDS=Parent=FBtr0084970;Name=dys-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32474-RA" - - - - -	13102	21,903,164 – 21,903,255	+	6	120	73.82	-1.22	0.69	0.837171
8148	3R_DroMel_CAF1	21,905,867 – 21,905,969	- - - - - - - - -	13103	21,905,867 – 21,905,969	+	5	107	81.67	-2.16	0.81	0.953550
8148	3R_DroMel_CAF1	21,905,867 – 21,905,969	- - - - - - - - -	13104	21,905,867 – 21,905,969	-	5	107	81.67	-1.77	0.66	0.642381
8149	3R_DroMel_CAF1	21,908,166 – 21,908,265	- - - - - - - - -	13105	21,908,166 – 21,908,265	-	5	106	76.27	-1.57	0.60	0.513839
8150	3R_DroMel_CAF1	21,913,752 – 21,913,842	- - - - - - - - -	13106	21,913,752 – 21,913,842	+	6	106	82.69	-1.69	0.78	0.699785
8151	3R_DroMel_CAF1	21,915,149 – 21,915,243	- - - - - - - - -	13107	21,915,149 – 21,915,243	+	6	119	81.20	-1.38	0.71	0.600605
8152	3R_DroMel_CAF1	21,915,899 – 21,915,989	- - - - - - - - -	13108	21,915,899 – 21,915,989	+	6	95	74.65	-2.78	0.38	0.982411
8153	3R_DroMel_CAF1	21,917,425 – 21,917,561	- - - - - - - - -	13109	21,917,425 – 21,917,531	+	6	115	80.64	-2.32	0.67	0.896098
8153	3R_DroMel_CAF1	21,917,425 – 21,917,561	- - - - - - - - -	13110	21,917,465 – 21,917,561	+	6	107	70.65	-1.46	0.69	0.950368
8154	3R_DroMel_CAF1	21,918,869 – 21,918,969	- - - - - - - - -	13111	21,918,869 – 21,918,969	-	6	113	76.34	-1.25	0.62	0.500000
8155	3R_DroMel_CAF1	21,920,189 – 21,920,279	- - - - - - - - -	13112	21,920,189 – 21,920,279	+	6	120	78.89	-1.51	0.65	0.722823
8156	3R_DroMel_CAF1	21,920,957 – 21,921,061	- - - - - - - - -	13113	21,920,957 – 21,921,061	-	6	112	82.79	-2.06	0.65	0.626605
8157	3R_DroMel_CAF1	21,930,738 – 21,930,893	- - - - - - - - -	13114	21,930,738 – 21,930,855	+	3	119	91.60	-3.92	0.84	0.947876
				13115	21,930,738 – 21,930,855	-	3	119	91.60	-3.06	0.81	0.887400
				13116	21,930,777 – 21,930,893	+	3	118	90.37	-3.27	0.75	0.850604
				13117	21,930,777 – 21,930,893	-	3	118	90.37	-3.06	0.88	0.966438
8158	3R_DroMel_CAF1	21,931,631 – 21,931,728	- - - - - - - - -	13118	21,931,631 – 21,931,728	-	5	102	86.97	-1.76	0.71	0.599651
8159	3R_DroMel_CAF1	21,933,099 – 21,933,271	- - - - - - - - -	13119	21,933,099 – 21,933,207	+	5	109	88.96	-2.60	0.82	0.994868
8159	3R_DroMel_CAF1	21,933,099 – 21,933,271	- - - - - - - - -	13120	21,933,167 – 21,933,271	-	5	104	87.20	-1.58	0.74	0.537942
8160	3R_DroMel_CAF1	21,952,511 – 21,952,627	- - - "knownCDS=Parent=FBtr0084986;Name=CG14556-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14556-RA" - - - - -	13121	21,952,511 – 21,952,627	-	6	116	79.91	-2.36	0.59	0.884773
8161	3R_DroMel_CAF1	21,955,473 – 21,955,574	- - - - - - - - -	13122	21,955,473 – 21,955,574	+	5	104	81.41	-3.04	0.45	0.965875
8161	3R_DroMel_CAF1	21,955,473 – 21,955,574	- - - - - - - - -	13123	21,955,473 – 21,955,574	-	5	104	81.41	-2.19	0.49	0.641496
8162	3R_DroMel_CAF1	21,956,509 – 21,956,604	- - - - - - - - -	13124	21,956,509 – 21,956,604	+	6	112	76.82	-2.16	0.64	0.966604
8163	3R_DroMel_CAF1	21,957,329 – 21,957,424	- - - - - - - - -	13125	21,957,329 – 21,957,424	-	5	98	87.56	-1.99	0.69	0.651525
8164	3R_DroMel_CAF1	21,958,441 – 21,958,607	- - - - - - - - -	13126	21,958,441 – 21,958,538	-	4	97	90.55	-1.37	0.96	0.718946
				13127	21,958,498 – 21,958,607	+	6	114	78.37	-1.72	0.63	0.811108
				13128	21,958,498 – 21,958,607	-	6	114	78.37	-1.92	0.62	0.878378
8165	3R_DroMel_CAF1	21,959,763 – 21,959,861	- - - - - - - - -	13129	21,959,763 – 21,959,861	+	5	98	95.31	-1.75	0.81	0.796403
8166	3R_DroMel_CAF1	21,961,863 – 21,961,954	- - - - - - - - -	13130	21,961,863 – 21,961,954	+	6	92	79.52	-2.05	0.70	0.917707
8166	3R_DroMel_CAF1	21,961,863 – 21,961,954	- - - - - - - - -	13131	21,961,863 – 21,961,954	-	6	92	79.52	-1.81	0.59	0.687313
8167	3R_DroMel_CAF1	21,965,097 – 21,965,189	- - - - - - - - -	13132	21,965,097 – 21,965,189	+	6	95	81.77	-3.54	0.58	0.939555
8167	3R_DroMel_CAF1	21,965,097 – 21,965,189	- - - - - - - - -	13133	21,965,097 – 21,965,189	-	6	95	81.77	-3.30	0.60	0.924962
8168	3R_DroMel_CAF1	21,965,780 – 21,965,896	- - - - - - - - -	13134	21,965,780 – 21,965,896	+	6	118	94.08	-1.83	0.89	0.946956
8169	3R_DroMel_CAF1	21,967,711 – 21,967,814	- - - - - - - - -	13135	21,967,711 – 21,967,814	-	6	120	76.77	-1.15	0.67	0.607123
8170	3R_DroMel_CAF1	21,970,947 – 21,971,057	- - - - - - - - -	13136	21,970,947 – 21,971,057	-	6	115	76.13	-1.68	0.51	0.500000
8171	3R_DroMel_CAF1	21,976,270 – 21,976,410	- - - - - - - - -	13137	21,976,270 – 21,976,388	+	5	118	91.86	-1.69	0.76	0.631774
				13138	21,976,270 – 21,976,388	-	5	118	91.86	-1.94	0.85	0.976877
				13139	21,976,310 – 21,976,410	+	5	100	90.80	-3.17	0.82	0.998788
				13140	21,976,310 – 21,976,410	-	5	100	90.80	-3.47	0.85	0.999779
8172	3R_DroMel_CAF1	21,978,340 – 21,978,444	- - - - - - - - -	13141	21,978,340 – 21,978,444	-	4	104	87.12	-1.87	0.81	0.845114
8173	3R_DroMel_CAF1	21,979,277 – 21,979,422	- - - - - - - - -	13142	21,979,277 – 21,979,395	-	6	120	79.89	-1.28	0.65	0.514358
8173	3R_DroMel_CAF1	21,979,277 – 21,979,422	- - - - - - - - -	13143	21,979,317 – 21,979,422	+	5	112	89.64	-2.11	0.81	0.958577
8174	3R_DroMel_CAF1	21,980,556 – 21,980,658	- - - - - - - - -	13144	21,980,556 – 21,980,658	+	5	103	87.60	-2.99	0.64	0.791564
8175	3R_DroMel_CAF1	21,981,745 – 21,981,865	- - - - - - - - -	13145	21,981,745 – 21,981,865	-	3	120	93.89	-2.35	0.86	0.800824
8176	3R_DroMel_CAF1	21,983,192 – 21,983,402	- - - - - - - - -	13146	21,983,192 – 21,983,289	+	4	120	74.43	-2.69	0.42	0.839953
8176	3R_DroMel_CAF1	21,983,192 – 21,983,402	- - - - - - - - -	13147	21,983,289 – 21,983,402	-	3	113	96.46	-2.09	0.92	0.811010
8177	3R_DroMel_CAF1	21,984,211 – 21,984,320	- - - - - - - - -	13148	21,984,211 – 21,984,320	+	3	118	90.40	-1.86	0.84	0.555860
8177	3R_DroMel_CAF1	21,984,211 – 21,984,320	- - - - - - - - -	13149	21,984,211 – 21,984,320	-	3	118	90.40	-2.05	0.82	0.609712
8178	3R_DroMel_CAF1	21,991,592 – 21,991,711	- - - - - - - - -	13150	21,991,592 – 21,991,711	-	5	120	76.85	-1.99	0.44	0.771052
8179	3R_DroMel_CAF1	21,993,433 – 21,993,579	- - - - - - - - -	13151	21,993,433 – 21,993,552	-	5	119	82.18	-2.02	0.76	0.896099
8179	3R_DroMel_CAF1	21,993,433 – 21,993,579	- - - - - - - - -	13152	21,993,473 – 21,993,579	-	5	119	83.81	-3.27	0.84	0.998816
8180	3R_DroMel_CAF1	21,994,019 – 21,994,211	- - - - - - - - -	13153	21,994,019 – 21,994,131	+	4	120	87.79	-1.48	0.71	0.529688
8180	3R_DroMel_CAF1	21,994,019 – 21,994,211	- - - - - - - - -	13154	21,994,091 – 21,994,211	+	4	120	96.67	-2.48	0.86	0.847642
8181	3R_DroMel_CAF1	21,994,929 – 21,995,136	- - - - - - - - -	13155	21,994,929 – 21,995,033	+	5	117	75.25	-2.47	0.36	0.990827
				13156	21,994,929 – 21,995,033	-	5	117	75.25	-2.90	0.25	0.998616
				13157	21,994,959 – 21,995,073	+	5	117	78.60	-2.50	0.50	0.970336
				13158	21,994,959 – 21,995,073	-	5	117	78.60	-2.60	0.47	0.978267
				13159	21,995,033 – 21,995,136	+	5	120	79.91	-1.81	0.55	0.516636
				13160	21,995,033 – 21,995,136	-	5	120	79.91	-1.81	0.55	0.515392
8182	3R_DroMel_CAF1	21,995,169 – 21,995,327	- - - - - - - - -	13161	21,995,169 – 21,995,287	-	5	120	81.98	-1.66	0.75	0.683162
8182	3R_DroMel_CAF1	21,995,169 – 21,995,327	- - - - - - - - -	13162	21,995,209 – 21,995,327	+	4	118	99.01	-2.87	1.01	0.956736
8183	3R_DroMel_CAF1	21,997,592 – 21,997,707	- - - - - - - - -	13163	21,997,592 – 21,997,707	+	5	120	88.66	-2.00	0.73	0.749611
8184	3R_DroMel_CAF1	21,997,995 – 21,998,460	- - - - - - - - -	13164	21,997,995 – 21,998,115	+	4	120	87.71	-1.79	0.76	0.752266
				13165	21,998,035 – 21,998,155	+	5	120	89.42	-1.66	0.78	0.708985
				13166	21,998,035 – 21,998,155	-	5	120	89.42	-1.89	0.77	0.832321
				13167	21,998,115 – 21,998,234	-	5	120	90.87	-2.33	0.85	0.996133
				13168	21,998,195 – 21,998,312	-	5	120	87.31	-1.71	0.77	0.702612
				13169	21,998,272 – 21,998,391	-	5	120	96.65	-1.93	0.91	0.993641
				13170	21,998,312 – 21,998,430	+	5	120	95.62	-1.46	0.90	0.899933
				13171	21,998,352 – 21,998,460	+	5	120	86.67	-2.23	0.74	0.899631
				13172	21,998,352 – 21,998,460	-	5	120	86.67	-1.55	0.75	0.535598
8185	3R_DroMel_CAF1	22,000,777 – 22,000,933	- - - - - - - - -	13173	22,000,777 – 22,000,893	-	4	120	91.66	-1.90	0.79	0.757671
8185	3R_DroMel_CAF1	22,000,777 – 22,000,933	- - - - - - - - -	13174	22,000,817 – 22,000,933	-	4	120	90.13	-2.37	0.80	0.935957
8186	3R_DroMel_CAF1	22,001,033 – 22,001,141	- - - - - - - - -	13175	22,001,033 – 22,001,141	+	3	120	83.61	-2.09	0.73	0.773597
8187	3R_DroMel_CAF1	22,003,833 – 22,003,982	- - - - - - - - -	13176	22,003,833 – 22,003,945	+	3	120	68.45	-1.98	0.49	0.830821
8187	3R_DroMel_CAF1	22,003,833 – 22,003,982	- - - - - - - - -	13177	22,003,867 – 22,003,982	+	3	120	62.50	-2.62	0.58	0.999986
8188	3R_DroMel_CAF1	22,004,224 – 22,004,316	- - - - - - - - -	13178	22,004,224 – 22,004,316	-	4	95	81.64	-1.51	0.75	0.557373
8189	3R_DroMel_CAF1	22,007,507 – 22,007,627	- - - - - - - - -	13179	22,007,507 – 22,007,627	+	4	120	94.44	-2.29	0.82	0.829969
8190	3R_DroMel_CAF1	22,008,948 – 22,009,039	- - - - - - - - -	13180	22,008,948 – 22,009,039	-	4	102	85.84	-1.89	0.70	0.754686
8191	3R_DroMel_CAF1	22,016,771 – 22,016,891	- - - "knownCDS=Parent=FBtr0085002;Name=CG6069-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6069-RA" - - - - -	13181	22,016,771 – 22,016,891	+	5	120	88.83	-1.40	0.79	0.514195
8191	3R_DroMel_CAF1	22,016,771 – 22,016,891		13182	22,016,771 – 22,016,891	-	5	120	88.83	-2.17	0.73	0.822639
8192	3R_DroMel_CAF1	22,018,093 – 22,018,206	- - - - - - - - -	13183	22,018,093 – 22,018,206	+	5	120	74.94	-1.83	0.05	0.900623
8193	3R_DroMel_CAF1	22,018,721 – 22,018,831	- - - - - - - - -	13184	22,018,721 – 22,018,831	-	5	110	97.82	-1.49	0.89	0.802689
8194	3R_DroMel_CAF1	22,019,727 – 22,019,821	- - - - - - - - -	13185	22,019,727 – 22,019,821	-	5	97	93.70	-1.71	0.92	0.989764
8195	3R_DroMel_CAF1	22,021,353 – 22,021,457	- - - - - - - - -	13186	22,021,353 – 22,021,457	+	5	105	87.64	-2.57	0.85	0.996390
8196	3R_DroMel_CAF1	22,022,430 – 22,022,520	- - - - - - - - -	13187	22,022,430 – 22,022,520	+	5	97	91.10	-3.07	0.88	0.999867
8196	3R_DroMel_CAF1	22,022,430 – 22,022,520	- - - - - - - - -	13188	22,022,430 – 22,022,520	-	5	97	91.10	-3.40	0.84	0.999674
8197	3R_DroMel_CAF1	22,023,844 – 22,024,015	- - - - - - - - -	13189	22,023,844 – 22,023,935	+	5	97	93.58	-1.49	0.82	0.687053
8197	3R_DroMel_CAF1	22,023,844 – 22,024,015	- - - - - - - - -	13190	22,023,905 – 22,024,015	+	5	116	95.91	-1.98	0.82	0.914247
8198	3R_DroMel_CAF1	22,024,504 – 22,024,658	- - - - - - - - -	13191	22,024,504 – 22,024,618	+	5	114	96.49	-1.28	0.88	0.609161
				13192	22,024,504 – 22,024,618	-	5	114	96.49	-1.35	0.97	0.924380
				13193	22,024,539 – 22,024,658	+	5	119	96.30	-1.40	0.84	0.550398
8199	3R_DroMel_CAF1	22,025,762 – 22,025,867	- - - - - - - - -	13194	22,025,762 – 22,025,867	-	5	119	84.08	-2.12	0.60	0.621071
8200	3R_DroMel_CAF1	22,025,943 – 22,026,055	- - - - - - - - -	13195	22,025,943 – 22,026,055	+	5	113	93.33	-1.55	0.89	0.945309
8201	3R_DroMel_CAF1	22,029,302 – 22,029,410	- - - - - - - - -	13196	22,029,302 – 22,029,410	-	5	116	84.62	-2.05	0.72	0.822158
8202	3R_DroMel_CAF1	22,030,320 – 22,030,424	- - - - - - - - -	13197	22,030,320 – 22,030,424	+	5	109	90.19	-1.41	0.81	0.606433
8203	3R_DroMel_CAF1	22,030,564 – 22,030,705	- - - - - - - - -	13198	22,030,564 – 22,030,679	-	5	118	89.23	-1.59	0.77	0.643602
8203	3R_DroMel_CAF1	22,030,564 – 22,030,705	- - - - - - - - -	13199	22,030,601 – 22,030,705	+	5	104	91.72	-1.58	0.77	0.571509
8204	3R_DroMel_CAF1	22,031,468 – 22,031,579	- - - - - - - - -	13200	22,031,468 – 22,031,579	+	5	112	92.19	-1.50	0.84	0.796464
8205	3R_DroMel_CAF1	22,031,648 – 22,031,743	- - - - - - - - -	13201	22,031,648 – 22,031,743	-	5	95	94.53	-1.83	0.89	0.987742
8206	3R_DroMel_CAF1	22,033,184 – 22,033,376	- - - - - - - - -	13202	22,033,184 – 22,033,278	+	5	97	94.94	-3.08	0.94	0.999978
				13203	22,033,184 – 22,033,278	-	5	97	94.94	-3.46	0.97	0.999992
				13204	22,033,278 – 22,033,376	+	6	120	81.38	-1.50	0.74	0.683721
				13205	22,033,278 – 22,033,376	-	6	120	81.38	-1.53	0.68	0.627510
8207	3R_DroMel_CAF1	22,033,873 – 22,034,007	- - - - - - - - -	13206	22,033,873 – 22,033,971	+	5	98	93.67	-2.11	0.94	0.999464
8207	3R_DroMel_CAF1	22,033,873 – 22,034,007	- - - - - - - - -	13207	22,033,896 – 22,034,007	+	5	111	94.41	-2.32	0.96	0.999879
8208	3R_DroMel_CAF1	22,035,901 – 22,036,025	- - - - - - - - -	13208	22,035,901 – 22,035,998	+	5	97	96.29	-1.97	0.89	0.990686
				13209	22,035,922 – 22,036,025	+	5	103	97.09	-3.18	0.85	0.997497
				13210	22,035,922 – 22,036,025	-	5	103	97.09	-1.41	0.92	0.849929
8209	3R_DroMel_CAF1	22,036,675 – 22,036,824	- - - - - - - - -	13211	22,036,675 – 22,036,792	+	5	117	94.79	-1.49	0.90	0.935229
				13212	22,036,675 – 22,036,792	-	5	117	94.79	-2.21	0.84	0.990053
				13213	22,036,715 – 22,036,824	+	5	110	93.24	-1.70	0.81	0.836791
				13214	22,036,715 – 22,036,824	-	5	110	93.24	-2.09	0.83	0.976892
8210	3R_DroMel_CAF1	22,037,630 – 22,037,799	- - - - - - - - -	13215	22,037,630 – 22,037,720	+	5	101	90.68	-1.41	0.86	0.757661
				13216	22,037,630 – 22,037,720	-	5	101	90.68	-1.25	0.95	0.775075
				13217	22,037,665 – 22,037,760	+	5	101	94.46	-3.00	0.94	0.999976
				13218	22,037,665 – 22,037,760	-	5	101	94.46	-2.12	0.99	0.999813
				13219	22,037,696 – 22,037,799	+	6	119	78.48	-2.00	0.49	0.596381
8211	3R_DroMel_CAF1	22,038,879 – 22,038,978	- - - - - - - - -	13220	22,038,879 – 22,038,978	+	6	120	81.26	-2.29	0.72	0.886501
8211	3R_DroMel_CAF1	22,038,879 – 22,038,978	- - - - - - - - -	13221	22,038,879 – 22,038,978	-	6	120	81.26	-1.57	0.65	0.599469
8212	3R_DroMel_CAF1	22,041,096 – 22,041,241	- - - - - - - - -	13222	22,041,096 – 22,041,209	+	5	114	93.57	-1.81	0.77	0.666598
8212	3R_DroMel_CAF1	22,041,096 – 22,041,241	- - - - - - - - -	13223	22,041,136 – 22,041,241	+	5	114	89.57	-1.92	0.70	0.548583
8213	3R_DroMel_CAF1	22,041,403 – 22,041,507	- - - - - - - - -	13224	22,041,403 – 22,041,507	+	5	104	95.58	-1.50	1.02	0.989407
8214	3R_DroMel_CAF1	22,047,837 – 22,047,932	- - - - - - - - -	13225	22,047,837 – 22,047,932	+	5	96	95.82	-1.52	0.98	0.983491
8215	3R_DroMel_CAF1	22,049,333 – 22,049,427	- - - - - - - - -	13226	22,049,333 – 22,049,427	-	5	95	85.97	-2.47	0.62	0.679646
8216	3R_DroMel_CAF1	22,052,222 – 22,052,366	- - - - - - - - -	13227	22,052,222 – 22,052,329	-	4	117	83.93	-3.43	0.59	0.961614
8216	3R_DroMel_CAF1	22,052,222 – 22,052,366	- - - - - - - - -	13228	22,052,262 – 22,052,366	-	4	117	85.71	-2.29	0.62	0.725905
8217	3R_DroMel_CAF1	22,053,707 – 22,053,814	- - - - - - - - -	13229	22,053,707 – 22,053,814	+	5	107	88.71	-1.73	0.85	0.907380
8218	3R_DroMel_CAF1	22,053,844 – 22,053,956	- - - - - - - - -	13230	22,053,844 – 22,053,956	-	6	120	87.36	-2.23	0.83	0.817922
8219	3R_DroMel_CAF1	22,054,029 – 22,054,125	- - - - - - - - -	13231	22,054,029 – 22,054,125	+	5	100	94.26	-1.84	0.88	0.986345
8220	3R_DroMel_CAF1	22,055,043 – 22,055,142	- - - - - - - - -	13232	22,055,043 – 22,055,142	+	6	104	71.54	-2.03	0.44	0.912101
8221	3R_DroMel_CAF1	22,055,442 – 22,055,534	- - - - - - - - -	13233	22,055,442 – 22,055,534	+	5	92	93.80	-1.26	0.91	0.799965
8222	3R_DroMel_CAF1	22,057,546 – 22,057,746	- - - "knownCDS=Parent=FBtr0084990;Name=CG12290-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12290-RA" - - - - -	13234	22,057,546 – 22,057,666	+	5	120	94.83	-1.51	0.88	0.901427
				13235	22,057,546 – 22,057,666	-	5	120	94.83	-1.64	0.90	0.970678
				13236	22,057,586 – 22,057,706	-	5	120	94.83	-1.46	0.84	0.713538
				13237	22,057,626 – 22,057,746	+	5	120	95.25	-2.38	0.90	0.999240
				13238	22,057,626 – 22,057,746	-	5	120	95.25	-2.91	0.86	0.999060
8223	3R_DroMel_CAF1	22,058,263 – 22,058,780	- - - "knownCDS=Parent=FBtr0084990;Name=CG12290-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12290-RA" - - - - -	13239	22,058,263 – 22,058,383	+	4	120	96.67	-1.71	0.92	0.689345
				13240	22,058,343 – 22,058,463	+	4	120	96.67	-3.06	0.99	0.991714
				13241	22,058,343 – 22,058,463	-	4	120	96.67	-2.91	0.96	0.985215
				13242	22,058,383 – 22,058,500	+	4	117	94.02	-1.47	0.90	0.613106
				13243	22,058,383 – 22,058,500	-	4	117	94.02	-1.94	0.91	0.919337
				13244	22,058,500 – 22,058,620	+	5	120	95.42	-1.56	0.95	0.982205
				13245	22,058,540 – 22,058,660	-	5	120	92.90	-1.74	0.81	0.845910
				13246	22,058,660 – 22,058,780	+	5	120	97.17	-1.32	0.87	0.517337
8224	3R_DroMel_CAF1	22,059,518 – 22,059,655	- - - - - - - - -	13247	22,059,518 – 22,059,627	+	5	120	90.96	-3.88	0.86	0.999862
				13248	22,059,518 – 22,059,627	-	5	120	90.96	-4.30	0.85	0.999779
				13249	22,059,553 – 22,059,655	+	5	120	87.96	-1.82	0.74	0.708725
				13250	22,059,553 – 22,059,655	-	5	120	87.96	-1.82	0.80	0.848712
8225	3R_DroMel_CAF1	22,059,767 – 22,060,036	- - - - - - - - -	13251	22,059,767 – 22,059,880	+	5	120	92.06	-1.69	0.84	0.921474
				13252	22,059,801 – 22,059,917	+	5	120	93.54	-1.46	0.88	0.895632
				13253	22,059,801 – 22,059,917	-	5	120	93.54	-1.13	0.92	0.621960
				13254	22,059,917 – 22,060,036	+	5	120	94.87	-1.77	0.77	0.513897
8226	3R_DroMel_CAF1	22,061,267 – 22,061,376	- - - - - - - - -	13255	22,061,267 – 22,061,376	+	5	120	89.97	-1.46	0.79	0.594990
8226	3R_DroMel_CAF1	22,061,267 – 22,061,376	- - - - - - - - -	13256	22,061,267 – 22,061,376	-	5	120	89.97	-1.99	0.79	0.914109
8227	3R_DroMel_CAF1	22,062,228 – 22,062,374	- - - - - - - - -	13257	22,062,228 – 22,062,340	+	5	120	93.49	-1.91	0.88	0.991215
8227	3R_DroMel_CAF1	22,062,228 – 22,062,374	- - - - - - - - -	13258	22,062,268 – 22,062,374	+	5	120	93.21	-2.12	0.74	0.663604
8228	3R_DroMel_CAF1	22,062,956 – 22,063,104	- - - - - - - - -	13259	22,062,956 – 22,063,064	+	5	120	93.79	-1.81	0.87	0.978027
8228	3R_DroMel_CAF1	22,062,956 – 22,063,104	- - - - - - - - -	13260	22,062,996 – 22,063,104	+	5	120	93.44	-2.52	0.82	0.994074
8229	3R_DroMel_CAF1	22,063,492 – 22,063,692	- - - - - - - - -	13261	22,063,492 – 22,063,612	+	5	120	99.00	-1.55	0.99	0.941235
				13262	22,063,492 – 22,063,612	-	5	120	99.00	-2.38	0.98	0.999068
				13263	22,063,532 – 22,063,652	+	5	120	98.33	-1.74	0.96	0.982548
				13264	22,063,572 – 22,063,692	+	5	120	98.33	-1.41	1.00	0.916985
8230	3R_DroMel_CAF1	22,063,898 – 22,064,014	- - - - - - - - -	13265	22,063,898 – 22,064,014	+	5	120	93.71	-1.62	0.86	0.927728
8230	3R_DroMel_CAF1	22,063,898 – 22,064,014	- - - - - - - - -	13266	22,063,898 – 22,064,014	-	5	120	93.71	-1.52	0.91	0.949854
8231	3R_DroMel_CAF1	22,064,468 – 22,064,576	- - - - - - - - -	13267	22,064,468 – 22,064,576	-	5	120	93.79	-1.44	0.89	0.890583
8232	3R_DroMel_CAF1	22,064,656 – 22,064,769	- - - - - - - - -	13268	22,064,656 – 22,064,769	-	5	120	88.72	-1.77	0.82	0.871765
8233	3R_DroMel_CAF1	22,064,847 – 22,064,967	- - - - - - - - -	13269	22,064,847 – 22,064,967	+	5	120	90.17	-2.46	0.74	0.921332
8233	3R_DroMel_CAF1	22,064,847 – 22,064,967	- - - - - - - - -	13270	22,064,847 – 22,064,967	-	5	120	90.17	-2.34	0.74	0.879318
8234	3R_DroMel_CAF1	22,064,997 – 22,065,113	- - - - - - - - -	13271	22,064,997 – 22,065,113	-	5	119	86.59	-2.70	0.68	0.903746
8235	3R_DroMel_CAF1	22,065,714 – 22,065,907	- - - - - - - - -	13272	22,065,714 – 22,065,834	+	5	120	94.25	-2.26	0.83	0.986143
				13273	22,065,754 – 22,065,874	+	5	120	86.32	-2.62	0.72	0.943772
				13274	22,065,794 – 22,065,907	+	5	120	76.57	-1.69	0.58	0.591868
				13275	22,065,794 – 22,065,907	-	5	120	76.57	-1.59	0.60	0.506149
8236	3R_DroMel_CAF1	22,066,019 – 22,066,495	- - - - - - - - -	13276	22,066,019 – 22,066,137	-	5	120	94.28	-1.42	0.83	0.657756
				13277	22,066,057 – 22,066,177	-	5	120	97.83	-2.63	0.93	0.999482
				13278	22,066,177 – 22,066,284	-	5	120	87.69	-2.10	0.77	0.911439
				13279	22,066,284 – 22,066,389	-	5	120	89.01	-1.96	0.90	0.987428
				13280	22,066,309 – 22,066,420	-	3	111	97.60	-1.31	1.02	0.548363
				13281	22,066,389 – 22,066,495	-	3	106	97.48	-1.70	0.95	0.661914
8237	3R_DroMel_CAF1	22,067,441 – 22,067,557	- - - - - - - - -	13282	22,067,441 – 22,067,557	+	5	120	85.50	-1.84	0.68	0.612866
8238	3R_DroMel_CAF1	22,067,791 – 22,067,894	- - - - - - - - -	13283	22,067,791 – 22,067,894	-	5	120	91.08	-2.18	0.75	0.865905
8239	3R_DroMel_CAF1	22,069,256 – 22,069,376	- - - - - - - - -	13284	22,069,256 – 22,069,376	+	5	120	95.41	-1.28	0.92	0.822642
8240	3R_DroMel_CAF1	22,070,456 – 22,070,569	- - - - - - - - -	13285	22,070,456 – 22,070,569	+	5	120	95.26	-1.78	0.91	0.989564
8240	3R_DroMel_CAF1	22,070,456 – 22,070,569	- - - - - - - - -	13286	22,070,456 – 22,070,569	-	5	120	95.26	-2.19	0.86	0.993867
8241	3R_DroMel_CAF1	22,070,757 – 22,070,871	- - - - - - - - -	13287	22,070,757 – 22,070,871	-	5	120	94.27	-1.56	0.81	0.712330
8242	3R_DroMel_CAF1	22,071,197 – 22,071,317	- - - - - - - - -	13288	22,071,197 – 22,071,317	+	5	120	96.83	-1.15	0.92	0.527054
8243	3R_DroMel_CAF1	22,071,515 – 22,071,632	- - - - - - - - -	13289	22,071,515 – 22,071,632	+	5	119	83.66	-1.66	0.67	0.516171
8244	3R_DroMel_CAF1	22,072,151 – 22,072,271	- - - - - - - - -	13290	22,072,151 – 22,072,271	+	5	120	91.58	-2.04	0.78	0.890336
8245	3R_DroMel_CAF1	22,073,228 – 22,073,379	- - - - - - - - -	13291	22,073,228 – 22,073,345	+	5	120	90.78	-1.80	0.77	0.788018
8245	3R_DroMel_CAF1	22,073,228 – 22,073,379	- - - - - - - - -	13292	22,073,268 – 22,073,379	+	5	120	87.94	-2.18	0.77	0.924303
8246	3R_DroMel_CAF1	22,073,751 – 22,073,901	- - - - - - - - -	13293	22,073,751 – 22,073,861	+	5	113	95.02	-1.49	0.96	0.975091
8246	3R_DroMel_CAF1	22,073,751 – 22,073,901	- - - - - - - - -	13294	22,073,791 – 22,073,901	+	5	113	96.09	-2.32	0.99	0.999883
8247	3R_DroMel_CAF1	22,074,167 – 22,074,287	- - - - - - - - -	13295	22,074,167 – 22,074,287	-	5	120	93.08	-2.09	0.81	0.956386
8248	3R_DroMel_CAF1	22,074,833 – 22,074,953	- - - - - - - - -	13296	22,074,833 – 22,074,953	+	5	120	97.33	-1.32	0.91	0.726694
8249	3R_DroMel_CAF1	22,074,987 – 22,075,146	- - - - - - - - -	13297	22,074,987 – 22,075,106	+	5	120	95.41	-1.40	0.88	0.822413
				13298	22,074,987 – 22,075,106	-	5	120	95.41	-1.41	0.84	0.632064
				13299	22,075,027 – 22,075,146	+	5	120	97.41	-1.72	0.93	0.979877
8250	3R_DroMel_CAF1	22,075,724 – 22,075,933	- - - - - - - - -	13300	22,075,724 – 22,075,833	+	5	119	89.20	-1.43	0.91	0.812708
				13301	22,075,724 – 22,075,833	-	5	119	89.20	-1.50	0.88	0.827626
				13302	22,075,763 – 22,075,873	+	5	120	87.43	-1.74	0.82	0.835997
				13303	22,075,803 – 22,075,913	-	5	120	87.61	-1.69	0.87	0.881515
				13304	22,075,833 – 22,075,933	-	5	100	95.95	-2.15	0.81	0.932614
8251	3R_DroMel_CAF1	22,078,822 – 22,078,913	- - - - - - - - -	13305	22,078,822 – 22,078,913	-	6	120	79.19	-1.39	0.81	0.813123
8252	3R_DroMel_CAF1	22,084,872 – 22,085,030	- - - - - - - - -	13306	22,084,872 – 22,084,963	+	6	95	85.85	-2.48	0.82	0.869930
				13307	22,084,872 – 22,084,963	-	6	95	85.85	-2.12	0.75	0.513599
				13308	22,084,930 – 22,085,030	+	6	104	92.57	-2.65	0.83	0.938242
				13309	22,084,930 – 22,085,030	-	6	104	92.57	-1.65	0.87	0.794174
8253	3R_DroMel_CAF1	22,093,545 – 22,093,714	- - - - - - - - -	13310	22,093,545 – 22,093,657	+	6	116	88.71	-1.71	0.87	0.759845
				13311	22,093,580 – 22,093,688	+	6	119	78.28	-1.89	0.66	0.913133
				13312	22,093,618 – 22,093,714	+	5	113	72.35	-2.89	0.50	0.999538
				13313	22,093,618 – 22,093,714	-	5	113	72.35	-2.11	0.28	0.956482
8254	3R_DroMel_CAF1	22,095,314 – 22,095,410	- - - - - - - - -	13314	22,095,314 – 22,095,410	+	6	112	84.75	-1.57	0.87	0.658200
8255	3R_DroMel_CAF1	22,095,853 – 22,095,950	- - - "knownCDS=Parent=FBtr0084991;Name=CG6154-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6154-RA" - - - - -	13315	22,095,853 – 22,095,950	+	6	110	79.43	-1.79	0.69	0.864150
8256	3R_DroMel_CAF1	22,096,398 – 22,096,491	- - - - - - - - -	13316	22,096,398 – 22,096,491	-	6	117	80.88	-1.55	0.62	0.534418
8257	3R_DroMel_CAF1	22,099,889 – 22,099,989	- - - - - - - - -	13317	22,099,889 – 22,099,989	-	5	107	73.55	-2.94	0.24	0.999150
8258	3R_DroMel_CAF1	22,103,498 – 22,103,589	- - - - - - - - -	13318	22,103,498 – 22,103,589	+	6	99	91.37	-1.87	0.82	0.550256
8258	3R_DroMel_CAF1	22,103,498 – 22,103,589	- - - - - - - - -	13319	22,103,498 – 22,103,589	-	6	99	91.37	-2.03	0.82	0.620072
8259	3R_DroMel_CAF1	22,111,764 – 22,111,855	- - - - - - - - -	13320	22,111,764 – 22,111,855	-	6	120	74.92	-0.95	0.71	0.643984
8260	3R_DroMel_CAF1	22,112,912 – 22,113,004	- - - - - - - - -	13321	22,112,912 – 22,113,004	-	6	103	76.08	-2.04	0.43	0.609731
8261	3R_DroMel_CAF1	22,114,804 – 22,114,899	- - - - - - - - -	13322	22,114,804 – 22,114,899	-	3	95	90.88	-2.33	0.94	0.955627
8262	3R_DroMel_CAF1	22,116,048 – 22,116,145	- - - - - - - - -	13323	22,116,048 – 22,116,145	+	6	107	80.76	-1.34	0.78	0.678470
8263	3R_DroMel_CAF1	22,117,534 – 22,117,627	- - - - - - - - -	13324	22,117,534 – 22,117,627	+	6	95	78.25	-2.08	0.46	0.569648
8263	3R_DroMel_CAF1	22,117,534 – 22,117,627	- - - - - - - - -	13325	22,117,534 – 22,117,627	-	6	95	78.25	-2.40	0.47	0.842315
8264	3R_DroMel_CAF1	22,120,083 – 22,120,183	- - - - - - - - -	13326	22,120,083 – 22,120,183	+	3	100	94.67	-2.50	0.97	0.977572
8265	3R_DroMel_CAF1	22,123,142 – 22,123,266	- - - - - - - - -	13327	22,123,142 – 22,123,234	-	3	92	99.28	-1.52	1.00	0.677452
				13328	22,123,174 – 22,123,266	+	4	112	87.75	-1.62	0.73	0.627503
				13329	22,123,174 – 22,123,266	-	4	112	87.75	-2.80	0.72	0.936876
8266	3R_DroMel_CAF1	22,123,516 – 22,123,607	- - - - - - - - -	13330	22,123,516 – 22,123,607	-	6	97	82.87	-1.54	0.71	0.536191
8267	3R_DroMel_CAF1	22,128,599 – 22,128,698	- - - - - - - - -	13331	22,128,599 – 22,128,698	+	6	120	81.85	-2.01	0.75	0.823550
8267	3R_DroMel_CAF1	22,128,599 – 22,128,698	- - - - - - - - -	13332	22,128,599 – 22,128,698	-	6	120	81.85	-2.22	0.72	0.841290
8268	3R_DroMel_CAF1	22,130,584 – 22,130,702	- - - - - - - - -	13333	22,130,584 – 22,130,702	-	5	120	90.69	-1.97	0.72	0.645823
8269	3R_DroMel_CAF1	22,132,152 – 22,132,256	- - - - - - - - -	13334	22,132,152 – 22,132,256	+	5	116	91.17	-1.20	0.89	0.561411
8270	3R_DroMel_CAF1	22,133,159 – 22,133,249	- - - - - - - - -	13335	22,133,159 – 22,133,249	+	6	110	75.39	-2.14	0.54	0.947903
8270	3R_DroMel_CAF1	22,133,159 – 22,133,249	- - - - - - - - -	13336	22,133,159 – 22,133,249	-	6	110	75.39	-1.94	0.53	0.859176
8271	3R_DroMel_CAF1	22,136,928 – 22,137,044	- - - - - - - - -	13337	22,136,928 – 22,137,044	-	6	120	77.19	-2.41	0.42	0.829941
8272	3R_DroMel_CAF1	22,138,613 – 22,138,873	- - - - - - - - -	13338	22,138,613 – 22,138,716	+	5	120	89.98	-3.47	0.86	0.999845
				13339	22,138,613 – 22,138,716	-	5	120	89.98	-3.16	0.97	0.999987
				13340	22,138,645 – 22,138,756	+	5	120	95.81	-1.59	0.94	0.981341
				13341	22,138,676 – 22,138,793	-	5	120	98.98	-1.44	0.89	0.560841
				13342	22,138,756 – 22,138,873	-	5	120	96.45	-1.15	0.98	0.740967
8273	3R_DroMel_CAF1	22,140,062 – 22,140,182	- - - - - - - - -	13343	22,140,062 – 22,140,182	+	5	120	96.42	-1.57	0.94	0.971030
8274	3R_DroMel_CAF1	22,140,296 – 22,140,416	- - - - - - - - -	13344	22,140,296 – 22,140,416	-	5	120	97.75	-1.39	0.99	0.923481
8275	3R_DroMel_CAF1	22,141,115 – 22,141,205	- - - - - - - - -	13345	22,141,115 – 22,141,205	+	5	108	82.40	-2.89	0.44	0.873207
8276	3R_DroMel_CAF1	22,141,397 – 22,141,517	- - - - - - - - -	13346	22,141,397 – 22,141,517	-	5	120	93.92	-1.59	0.94	0.986474
8277	3R_DroMel_CAF1	22,141,852 – 22,142,012	- - - - - - - - -	13347	22,141,852 – 22,141,972	-	5	120	97.17	-2.16	0.92	0.997566
8277	3R_DroMel_CAF1	22,141,852 – 22,142,012	- - - - - - - - -	13348	22,141,892 – 22,142,012	-	5	120	96.16	-1.82	0.86	0.956217
8278	3R_DroMel_CAF1	22,142,169 – 22,142,369	- - - - - - - - -	13349	22,142,169 – 22,142,289	+	5	120	97.00	-2.41	0.94	0.999543
				13350	22,142,169 – 22,142,289	-	5	120	97.00	-1.39	0.90	0.807017
				13351	22,142,209 – 22,142,329	+	5	120	97.67	-2.07	0.96	0.998206
				13352	22,142,249 – 22,142,369	-	5	120	95.33	-1.36	0.86	0.697427
8279	3R_DroMel_CAF1	22,143,356 – 22,143,472	- - - - - - - - -	13353	22,143,356 – 22,143,472	+	5	120	95.07	-1.48	0.81	0.579494
8280	3R_DroMel_CAF1	22,144,105 – 22,144,225	- - - - - - - - -	13354	22,144,105 – 22,144,225	+	5	120	95.42	-2.51	0.86	0.998107
8281	3R_DroMel_CAF1	22,144,418 – 22,144,559	- - - - - - - - -	13355	22,144,418 – 22,144,520	+	5	120	93.04	-1.93	0.99	0.999351
8281	3R_DroMel_CAF1	22,144,418 – 22,144,559	- - - - - - - - -	13356	22,144,440 – 22,144,559	+	5	120	98.66	-1.41	0.99	0.895849
8282	3R_DroMel_CAF1	22,144,667 – 22,144,786	- - - - - - - - -	13357	22,144,667 – 22,144,786	+	5	120	89.87	-1.87	0.75	0.761164
8283	3R_DroMel_CAF1	22,144,825 – 22,145,052	- - - - - - - - -	13358	22,144,825 – 22,144,939	+	4	120	95.16	-2.03	0.98	0.961945
8283	3R_DroMel_CAF1	22,144,825 – 22,145,052	- - - - - - - - -	13359	22,144,939 – 22,145,052	-	4	120	91.85	-2.04	0.74	0.620869
8284	3R_DroMel_CAF1	22,146,293 – 22,146,408	- - - - - - - - -	13360	22,146,293 – 22,146,408	+	4	120	94.61	-1.87	0.84	0.703532
8285	3R_DroMel_CAF1	22,146,528 – 22,146,646	- - - - - - - - -	13361	22,146,528 – 22,146,646	+	4	120	92.35	-1.72	0.88	0.830440
8286	3R_DroMel_CAF1	22,147,672 – 22,147,789	- - - - - - - - -	13362	22,147,672 – 22,147,789	+	4	120	94.37	-2.23	0.93	0.970506
8286	3R_DroMel_CAF1	22,147,672 – 22,147,789	- - - - - - - - -	13363	22,147,672 – 22,147,789	-	4	120	94.37	-2.06	0.99	0.976129
8287	3R_DroMel_CAF1	22,147,867 – 22,147,985	- - - - - - - - -	13364	22,147,867 – 22,147,985	-	4	120	93.98	-1.99	0.94	0.951765
8288	3R_DroMel_CAF1	22,148,215 – 22,148,330	- - - - - - - - -	13365	22,148,215 – 22,148,330	+	4	115	94.20	-1.30	0.95	0.500000
8289	3R_DroMel_CAF1	22,148,561 – 22,148,681	- - - - - - - - -	13366	22,148,561 – 22,148,681	+	4	120	94.72	-1.60	0.84	0.500000
8290	3R_DroMel_CAF1	22,149,141 – 22,149,261	- - - - - - - - -	13367	22,149,141 – 22,149,261	+	4	120	96.25	-1.64	0.88	0.567032
8291	3R_DroMel_CAF1	22,149,301 – 22,149,541	- - - - - - - - -	13368	22,149,301 – 22,149,421	-	4	120	95.42	-1.90	0.89	0.817094
				13369	22,149,381 – 22,149,501	+	4	120	94.58	-2.25	0.95	0.976303
				13370	22,149,381 – 22,149,501	-	4	120	94.58	-2.28	0.83	0.842699
				13371	22,149,421 – 22,149,541	+	4	120	97.08	-2.78	0.96	0.977558
8292	3R_DroMel_CAF1	22,149,614 – 22,149,726	- - - - - - - - -	13372	22,149,614 – 22,149,726	+	4	120	89.35	-1.87	0.75	0.748059
8293	3R_DroMel_CAF1	22,149,766 – 22,149,925	- - - - - - - - -	13373	22,149,766 – 22,149,885	+	4	120	91.39	-1.60	0.88	0.770049
				13374	22,149,766 – 22,149,885	-	4	120	91.39	-1.73	0.74	0.544967
				13375	22,149,805 – 22,149,925	+	4	120	95.00	-3.23	0.97	0.995425
				13376	22,149,805 – 22,149,925	-	4	120	95.00	-2.10	0.89	0.902963
8294	3R_DroMel_CAF1	22,150,510 – 22,150,630	- - - - - - - - -	13377	22,150,510 – 22,150,630	-	3	120	98.89	-1.74	0.96	0.717091
8295	3R_DroMel_CAF1	22,150,710 – 22,150,830	- - - - - - - - -	13378	22,150,710 – 22,150,830	-	3	120	98.89	-1.32	1.00	0.500000
8296	3R_DroMel_CAF1	22,151,656 – 22,151,854	- - - - - - - - -	13379	22,151,656 – 22,151,774	-	3	120	96.11	-2.51	0.89	0.884721
				13380	22,151,694 – 22,151,814	-	3	120	97.78	-1.95	1.01	0.919488
				13381	22,151,734 – 22,151,854	-	3	120	98.33	-1.50	0.97	0.574637
8297	3R_DroMel_CAF1	22,152,942 – 22,153,062	- - - - - - - - -	13382	22,152,942 – 22,153,062	+	3	120	96.66	-1.67	0.91	0.532692
8298	3R_DroMel_CAF1	22,153,609 – 22,153,729	- - - - - - - - -	13383	22,153,609 – 22,153,729	+	3	120	90.83	-2.84	0.70	0.620267
8299	3R_DroMel_CAF1	22,154,619 – 22,154,779	- - - - - - - - -	13384	22,154,619 – 22,154,739	-	3	120	98.33	-2.54	0.97	0.967480
8299	3R_DroMel_CAF1	22,154,619 – 22,154,779	- - - - - - - - -	13385	22,154,659 – 22,154,779	-	3	120	98.33	-1.45	0.97	0.532033
8300	3R_DroMel_CAF1	22,155,337 – 22,155,457	- - - - - - - - -	13386	22,155,337 – 22,155,457	-	3	120	99.44	-1.73	1.00	0.812686
8301	3R_DroMel_CAF1	22,160,431 – 22,160,528	- - - - - - - - -	13387	22,160,431 – 22,160,528	-	6	99	82.59	-1.87	0.65	0.577922
8302	3R_DroMel_CAF1	22,161,180 – 22,161,282	- - - - - - - - -	13388	22,161,180 – 22,161,282	-	6	120	81.81	-1.61	0.63	0.511306
8303	3R_DroMel_CAF1	22,173,856 – 22,173,950	- - - - - - - - -	13389	22,173,856 – 22,173,950	+	5	105	88.94	-1.54	0.76	0.559810
8304	3R_DroMel_CAF1	22,179,478 – 22,179,572	- - - - - - - - -	13390	22,179,478 – 22,179,572	+	6	120	85.57	-2.05	0.87	0.880593
8305	3R_DroMel_CAF1	22,179,855 – 22,179,988	- - - - - - - - -	13391	22,179,855 – 22,179,948	-	6	120	83.14	-2.36	0.60	0.563415
				13392	22,179,893 – 22,179,988	+	5	95	89.86	-2.33	0.81	0.985251
				13393	22,179,893 – 22,179,988	-	5	95	89.86	-1.30	0.83	0.521393
8306	3R_DroMel_CAF1	22,181,655 – 22,181,769	- - - "knownCDS=Parent=FBtr0100013;Name=CG33970-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33970-RB" - - - - -	13394	22,181,655 – 22,181,769	+	6	120	78.07	-1.77	0.62	0.829801
8307	3R_DroMel_CAF1	22,181,790 – 22,181,880	- - - - - - - - -	13395	22,181,790 – 22,181,880	-	3	106	73.27	-1.41	0.62	0.555987
8308	3R_DroMel_CAF1	22,185,106 – 22,185,231	- - - - - - - - -	13396	22,185,106 – 22,185,205	-	6	115	79.36	-1.75	0.60	0.696592
				13397	22,185,126 – 22,185,231	+	6	106	83.80	-1.83	0.71	0.551781
				13398	22,185,126 – 22,185,231	-	6	106	83.80	-1.74	0.71	0.517409
8309	3R_DroMel_CAF1	22,191,928 – 22,192,024	- - - - - - - - -	13399	22,191,928 – 22,192,024	-	6	107	79.99	-1.49	0.72	0.762701
8310	3R_DroMel_CAF1	22,193,148 – 22,193,254	- - - - - - - - -	13400	22,193,148 – 22,193,254	-	6	106	79.14	-1.42	0.62	0.552415
8311	3R_DroMel_CAF1	22,193,390 – 22,193,483	- - - - - - - - -	13401	22,193,390 – 22,193,483	-	6	104	77.25	-1.35	0.75	0.863678
8312	3R_DroMel_CAF1	22,193,883 – 22,193,988	- - - - - - - - -	13402	22,193,883 – 22,193,988	-	6	110	78.02	-1.78	0.72	0.929074
8313	3R_DroMel_CAF1	22,194,871 – 22,194,965	- - - - - - - - -	13403	22,194,871 – 22,194,965	+	6	95	95.19	-1.81	0.89	0.962596
8314	3R_DroMel_CAF1	22,195,783 – 22,195,927	- - - - - - - - -	13404	22,195,783 – 22,195,897	-	6	120	80.05	-2.04	0.57	0.740977
8314	3R_DroMel_CAF1	22,195,783 – 22,195,927	- - - - - - - - -	13405	22,195,818 – 22,195,927	-	6	118	82.54	-2.27	0.69	0.766321
8315	3R_DroMel_CAF1	22,201,457 – 22,201,549	- - - - - - - - -	13406	22,201,457 – 22,201,549	+	4	96	84.89	-1.84	0.81	0.832678
8316	3R_DroMel_CAF1	22,201,637 – 22,201,739	- - - - - - - - -	13407	22,201,637 – 22,201,739	+	6	110	74.20	-2.77	0.44	0.992670
8317	3R_DroMel_CAF1	22,212,134 – 22,212,229	- - - - - - - - -	13408	22,212,134 – 22,212,229	+	6	105	77.78	-2.44	0.43	0.826496
8317	3R_DroMel_CAF1	22,212,134 – 22,212,229	- - - - - - - - -	13409	22,212,134 – 22,212,229	-	6	105	77.78	-2.55	0.50	0.944826
8318	3R_DroMel_CAF1	22,216,712 – 22,216,815	- - - - - - - - -	13410	22,216,712 – 22,216,815	-	6	113	81.11	-2.04	0.59	0.686121
8319	3R_DroMel_CAF1	22,217,262 – 22,217,362	- - - - - - - - -	13411	22,217,262 – 22,217,362	-	6	107	81.96	-1.81	0.61	0.542007
8320	3R_DroMel_CAF1	22,220,401 – 22,220,536	- - - - - - - - -	13412	22,220,401 – 22,220,501	-	6	110	79.06	-1.97	0.57	0.780436
				13413	22,220,434 – 22,220,536	+	6	112	79.84	-1.54	0.67	0.726013
				13414	22,220,434 – 22,220,536	-	6	112	79.84	-2.31	0.74	0.940599
8321	3R_DroMel_CAF1	22,221,909 – 22,222,029	- - - - - - - - -	13415	22,221,909 – 22,222,000	+	6	106	82.82	-2.63	0.55	0.585738
8321	3R_DroMel_CAF1	22,221,909 – 22,222,029	- - - - - - - - -	13416	22,221,926 – 22,222,029	+	6	115	77.40	-2.05	0.53	0.829594
8322	3R_DroMel_CAF1	22,223,961 – 22,224,060	- - - - - - - - -	13417	22,223,961 – 22,224,060	-	3	99	99.33	-1.49	0.95	0.525599
8323	3R_DroMel_CAF1	22,224,288 – 22,224,382	- - - - - - - - -	13418	22,224,288 – 22,224,382	+	4	97	88.42	-3.52	0.82	0.991398
8324	3R_DroMel_CAF1	22,225,362 – 22,225,544	- - - - - - - - -	13419	22,225,362 – 22,225,475	-	4	114	88.66	-2.70	0.90	0.993676
				13420	22,225,401 – 22,225,515	+	4	114	95.18	-2.61	0.85	0.928491
				13421	22,225,401 – 22,225,515	-	4	114	95.18	-2.19	0.87	0.892040
				13422	22,225,435 – 22,225,544	+	4	120	89.37	-1.65	0.72	0.571860
8325	3R_DroMel_CAF1	22,227,047 – 22,227,196	- - - - - - - - -	13423	22,227,047 – 22,227,162	+	3	117	75.07	-3.06	0.60	0.999661
				13424	22,227,083 – 22,227,196	+	3	114	82.79	-2.38	0.58	0.559942
				13425	22,227,083 – 22,227,196	-	3	114	82.79	-3.40	0.67	0.983899
8326	3R_DroMel_CAF1	22,230,085 – 22,230,175	- - - - - - - - -	13426	22,230,085 – 22,230,175	-	4	90	88.89	-1.83	0.70	0.627612
8327	3R_DroMel_CAF1	22,230,638 – 22,230,734	- - - - - - - - -	13427	22,230,638 – 22,230,734	-	5	96	90.38	-1.49	0.78	0.591261
8328	3R_DroMel_CAF1	22,234,475 – 22,234,570	- - - - - - - - -	13428	22,234,475 – 22,234,570	-	5	95	95.37	-1.15	0.97	0.775670
8329	3R_DroMel_CAF1	22,235,397 – 22,235,498	- - - - - - - - -	13429	22,235,397 – 22,235,498	+	4	101	97.52	-3.51	0.90	0.919196
8329	3R_DroMel_CAF1	22,235,397 – 22,235,498	- - - - - - - - -	13430	22,235,397 – 22,235,498	-	4	101	97.52	-2.10	0.91	0.823670
8330	3R_DroMel_CAF1	22,240,522 – 22,240,642	- - - "knownCDS=Parent=FBtr0085006;Name=CG5432-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5432-RA" - - - - -	13431	22,240,522 – 22,240,642	-	6	120	85.67	-2.20	0.79	0.698218
8331	3R_DroMel_CAF1	22,242,338 – 22,242,437	- - - - - - - - -	13432	22,242,338 – 22,242,437	-	6	110	77.70	-1.88	0.64	0.912239
8332	3R_DroMel_CAF1	22,245,506 – 22,245,666	- - - - - - - - -	13433	22,245,506 – 22,245,616	+	6	116	81.75	-2.15	0.65	0.771733
8332	3R_DroMel_CAF1	22,245,506 – 22,245,666	- - - - - - - - -	13434	22,245,576 – 22,245,666	+	6	99	82.30	-1.86	0.63	0.576691
8333	3R_DroMel_CAF1	22,246,426 – 22,246,527	- - - - - - - - -	13435	22,246,426 – 22,246,527	-	6	115	77.75	-2.18	0.50	0.815478
8334	3R_DroMel_CAF1	22,247,027 – 22,247,121	- - - - - - - - -	13436	22,247,027 – 22,247,121	-	5	94	70.27	-2.15	0.33	0.956798
8335	3R_DroMel_CAF1	22,247,436 – 22,247,597	- - - - - - - - -	13437	22,247,436 – 22,247,527	+	6	106	82.85	-1.60	0.68	0.516081
8335	3R_DroMel_CAF1	22,247,436 – 22,247,597	- - - - - - - - -	13438	22,247,489 – 22,247,597	+	6	111	91.74	-1.34	0.90	0.744644
8336	3R_DroMel_CAF1	22,252,491 – 22,252,621	- - - - - - - - -	13439	22,252,491 – 22,252,594	-	5	106	77.58	-2.13	0.39	0.848870
8336	3R_DroMel_CAF1	22,252,491 – 22,252,621	- - - - - - - - -	13440	22,252,531 – 22,252,621	-	4	94	88.52	-2.39	0.84	0.969222
8337	3R_DroMel_CAF1	22,253,630 – 22,253,743	- - - - - - - - -	13441	22,253,630 – 22,253,743	-	5	115	91.47	-1.89	0.72	0.536156
8338	3R_DroMel_CAF1	22,254,204 – 22,254,306	- - - - - - - - -	13442	22,254,204 – 22,254,306	-	6	119	87.75	-2.90	0.76	0.695718
8339	3R_DroMel_CAF1	22,254,687 – 22,254,784	- - - - - - - - -	13443	22,254,687 – 22,254,784	-	6	106	90.00	-1.47	0.87	0.581529
8340	3R_DroMel_CAF1	22,255,096 – 22,255,196	- - - - - - - - -	13444	22,255,096 – 22,255,196	+	6	120	74.35	-1.85	0.54	0.862594
8341	3R_DroMel_CAF1	22,256,227 – 22,256,334	- - - - - - - - -	13445	22,256,227 – 22,256,334	+	6	119	80.70	-1.12	0.73	0.517927
8342	3R_DroMel_CAF1	22,257,768 – 22,257,868	- - - - - - - - -	13446	22,257,768 – 22,257,868	+	6	120	79.07	-0.91	0.84	0.521936
8343	3R_DroMel_CAF1	22,258,899 – 22,259,000	- - - - - - - - -	13447	22,258,899 – 22,259,000	+	3	117	68.86	-0.60	0.80	0.521193
8344	3R_DroMel_CAF1	22,261,859 – 22,261,950	- - - - - - - - -	13448	22,261,859 – 22,261,950	-	6	108	80.41	-2.25	0.84	0.939993
8345	3R_DroMel_CAF1	22,267,757 – 22,267,870	- - - - - - - - -	13449	22,267,757 – 22,267,870	+	5	117	91.75	-2.41	0.70	0.574548
8346	3R_DroMel_CAF1	22,268,875 – 22,268,966	- - - - - - - - -	13450	22,268,875 – 22,268,966	+	3	98	80.63	-1.51	0.95	0.988622
8347	3R_DroMel_CAF1	22,270,458 – 22,270,556	- - - - - - - - -	13451	22,270,458 – 22,270,556	-	6	105	84.85	-2.39	0.74	0.670425
8348	3R_DroMel_CAF1	22,271,318 – 22,271,408	- - - - - - - - -	13452	22,271,318 – 22,271,408	+	5	90	71.69	-1.81	0.45	0.747506
8349	3R_DroMel_CAF1	22,278,921 – 22,279,018	- - - - - - - - -	13453	22,278,921 – 22,279,018	+	5	120	86.42	-2.64	0.82	0.993710
8350	3R_DroMel_CAF1	22,280,951 – 22,281,090	- - - - - - - - -	13454	22,280,951 – 22,281,050	-	3	99	92.59	-1.75	0.92	0.690502
8350	3R_DroMel_CAF1	22,280,951 – 22,281,090	- - - - - - - - -	13455	22,280,970 – 22,281,090	+	5	120	70.76	-1.65	0.04	0.604119
8351	3R_DroMel_CAF1	22,284,776 – 22,284,874	- - - "knownCDS=Parent=FBtr0085014;Name=CG14238-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14238-RA" - - - - -	13456	22,284,776 – 22,284,874	-	6	112	78.04	-1.51	0.61	0.636615
8352	3R_DroMel_CAF1	22,284,953 – 22,285,053	- - - "knownCDS=Parent=FBtr0085014;Name=CG14238-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14238-RA" - - - - -	13457	22,284,953 – 22,285,053	+	6	103	84.29	-3.61	0.66	0.836113
8352	3R_DroMel_CAF1	22,284,953 – 22,285,053		13458	22,284,953 – 22,285,053	-	6	103	84.29	-2.73	0.67	0.647902
8353	3R_DroMel_CAF1	22,286,243 – 22,286,334	- - - "knownCDS=Parent=FBtr0085014;Name=CG14238-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14238-RA" - - - - -	13459	22,286,243 – 22,286,334	-	6	101	84.16	-2.35	0.70	0.613694
8354	3R_DroMel_CAF1	22,289,996 – 22,290,122	- - - - - - - - -	13460	22,289,996 – 22,290,093	+	6	105	81.61	-2.09	0.58	0.620221
8354	3R_DroMel_CAF1	22,289,996 – 22,290,122	- - - - - - - - -	13461	22,290,021 – 22,290,122	+	6	101	89.64	-3.17	0.74	0.610333
8355	3R_DroMel_CAF1	22,292,978 – 22,293,085	- - - "knownCDS=Parent=FBtr0085015, FBtr0085016, FBtr0085017;Name=CG5455-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5455-RA, FlyBase+Annotation+IDs:CG5455-RB, FlyBase+Annotation+IDs:CG5455-RC" - - - - -	13462	22,292,978 – 22,293,085	+	6	117	76.61	-2.67	0.50	0.981374
8356	3R_DroMel_CAF1	22,299,174 – 22,299,281	- - - "knownCDS=Parent=FBtr0085023;Name=CG6490-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6490-RA" - - - - -	13463	22,299,174 – 22,299,281	-	6	116	79.52	-1.65	0.59	0.594229
8357	3R_DroMel_CAF1	22,304,469 – 22,304,568	- - - - - - - - -	13464	22,304,469 – 22,304,568	+	5	111	72.13	-0.79	0.74	0.626159
8358	3R_DroMel_CAF1	22,304,862 – 22,304,952	- - - - - - - - -	13465	22,304,862 – 22,304,952	-	6	120	83.07	-2.04	0.64	0.558452
8359	3R_DroMel_CAF1	22,306,067 – 22,306,164	- - "RNAmicro=f:22306067_t:22306171_strand:-_p:0.938492" - - - - - -	13466	22,306,067 – 22,306,164	+	5	105	92.42	-3.76	0.83	0.999475
8359	3R_DroMel_CAF1	22,306,067 – 22,306,164		13467	22,306,067 – 22,306,164	-	5	105	92.42	-2.31	0.81	0.984664
8360	3R_DroMel_CAF1	22,306,831 – 22,306,924	- - - - - - - - -	13468	22,306,831 – 22,306,924	+	6	93	92.91	-1.49	0.91	0.911289
8361	3R_DroMel_CAF1	22,307,577 – 22,307,705	- - - - - - - - -	13469	22,307,577 – 22,307,674	-	6	108	80.33	-2.48	0.44	0.543390
				13470	22,307,614 – 22,307,705	+	6	102	78.03	-2.56	0.34	0.574681
				13471	22,307,614 – 22,307,705	-	6	102	78.03	-2.47	0.40	0.739783
8362	3R_DroMel_CAF1	22,309,212 – 22,309,306	- - - - - - - - -	13472	22,309,212 – 22,309,306	+	6	95	87.70	-2.59	0.78	0.664830
8362	3R_DroMel_CAF1	22,309,212 – 22,309,306	- - - - - - - - -	13473	22,309,212 – 22,309,306	-	6	95	87.70	-2.55	0.79	0.729048
8363	3R_DroMel_CAF1	22,312,080 – 22,312,173	- - - - - - - - -	13474	22,312,080 – 22,312,173	+	6	96	81.70	-2.96	0.64	0.907137
8363	3R_DroMel_CAF1	22,312,080 – 22,312,173	- - - - - - - - -	13475	22,312,080 – 22,312,173	-	6	96	81.70	-1.64	0.62	0.507859
8364	3R_DroMel_CAF1	22,317,023 – 22,317,128	- - - - - - - - -	13476	22,317,023 – 22,317,128	+	6	116	79.63	-3.21	0.61	0.977868
8365	3R_DroMel_CAF1	22,318,989 – 22,319,127	- - - - - - - - -	13477	22,318,989 – 22,319,097	+	5	115	92.33	-1.38	0.90	0.857285
				13478	22,318,989 – 22,319,097	-	5	115	92.33	-1.71	0.81	0.839832
				13479	22,319,020 – 22,319,127	-	4	114	93.06	-1.56	0.90	0.728356
8366	3R_DroMel_CAF1	22,319,254 – 22,319,346	- - - - - - - - -	13480	22,319,254 – 22,319,346	+	4	94	96.77	-2.05	0.87	0.741555
8367	3R_DroMel_CAF1	22,321,063 – 22,321,163	- - - - - - - - -	13481	22,321,063 – 22,321,163	+	6	101	92.71	-1.43	0.87	0.594781
8367	3R_DroMel_CAF1	22,321,063 – 22,321,163	- - - - - - - - -	13482	22,321,063 – 22,321,163	-	6	101	92.71	-2.08	0.85	0.890537
8368	3R_DroMel_CAF1	22,322,732 – 22,322,826	- - - - - - - - -	13483	22,322,732 – 22,322,826	+	6	95	75.28	-1.41	0.58	0.518694
8369	3R_DroMel_CAF1	22,325,174 – 22,325,275	- - - - - - - - -	13484	22,325,174 – 22,325,275	+	6	116	82.94	-1.84	0.76	0.702957
8369	3R_DroMel_CAF1	22,325,174 – 22,325,275	- - - - - - - - -	13485	22,325,174 – 22,325,275	-	6	116	82.94	-1.97	0.82	0.828191
8370	3R_DroMel_CAF1	22,326,438 – 22,326,541	- - - - - - - - -	13486	22,326,438 – 22,326,541	-	6	116	74.51	-1.71	0.52	0.687820
8371	3R_DroMel_CAF1	22,330,482 – 22,330,584	- - - - - - - - -	13487	22,330,482 – 22,330,584	-	5	114	86.89	-2.02	0.73	0.806371
8372	3R_DroMel_CAF1	22,332,504 – 22,332,613	- - - - - - - - -	13488	22,332,504 – 22,332,613	+	6	112	88.61	-3.27	0.78	0.881300
8372	3R_DroMel_CAF1	22,332,504 – 22,332,613	- - - - - - - - -	13489	22,332,504 – 22,332,613	-	6	112	88.61	-2.60	0.76	0.519362
8373	3R_DroMel_CAF1	22,332,788 – 22,332,882	- - - - - - - - -	13490	22,332,788 – 22,332,882	+	5	99	85.89	-1.56	0.75	0.550371
8374	3R_DroMel_CAF1	22,335,392 – 22,335,557	- - - - - - - - -	13491	22,335,392 – 22,335,491	+	5	99	94.55	-1.40	0.85	0.730931
8374	3R_DroMel_CAF1	22,335,392 – 22,335,557	- - - - - - - - -	13492	22,335,464 – 22,335,557	+	5	102	85.67	-2.11	0.63	0.580507
8375	3R_DroMel_CAF1	22,345,926 – 22,346,019	- - - - - - - - -	13493	22,345,926 – 22,346,019	+	6	120	80.48	-1.91	0.63	0.758744
8376	3R_DroMel_CAF1	22,348,420 – 22,348,520	- - - - - - - - -	13494	22,348,420 – 22,348,520	-	5	100	96.80	-1.60	0.85	0.775653
8377	3R_DroMel_CAF1	22,348,715 – 22,348,893	- - - - - - - - -	13495	22,348,715 – 22,348,818	-	5	114	84.29	-1.84	0.76	0.775221
8377	3R_DroMel_CAF1	22,348,715 – 22,348,893	- - - - - - - - -	13496	22,348,789 – 22,348,893	+	5	120	81.84	-1.81	0.65	0.658226
8378	3R_DroMel_CAF1	22,349,918 – 22,350,010	- - - - - - - - -	13497	22,349,918 – 22,350,010	+	6	92	96.45	-1.81	0.88	0.920425
8379	3R_DroMel_CAF1	22,350,434 – 22,350,542	- - - - - - - - -	13498	22,350,434 – 22,350,542	+	5	120	76.21	-1.78	0.35	0.528293
8380	3R_DroMel_CAF1	22,352,568 – 22,352,658	- - - - - - - - -	13499	22,352,568 – 22,352,658	+	5	96	92.66	-1.36	0.85	0.699036
8381	3R_DroMel_CAF1	22,352,736 – 22,352,852	- - - - - - - - -	13500	22,352,736 – 22,352,852	-	5	120	92.06	-2.07	0.88	0.995076
8382	3R_DroMel_CAF1	22,354,129 – 22,354,236	- - - - - - - - -	13501	22,354,129 – 22,354,236	+	5	107	92.71	-1.39	0.82	0.634029
8383	3R_DroMel_CAF1	22,355,433 – 22,355,569	- - - - - - - - -	13502	22,355,433 – 22,355,539	+	5	111	89.53	-1.80	0.80	0.862602
				13503	22,355,433 – 22,355,539	-	5	111	89.53	-2.42	0.84	0.994873
				13504	22,355,465 – 22,355,569	+	5	104	97.31	-2.02	0.94	0.997205
				13505	22,355,465 – 22,355,569	-	5	104	97.31	-2.39	0.99	0.999819
8384	3R_DroMel_CAF1	22,356,404 – 22,356,531	- - - - - - - - -	13506	22,356,404 – 22,356,494	+	5	90	96.11	-1.40	0.84	0.591404
8384	3R_DroMel_CAF1	22,356,404 – 22,356,531	- - - - - - - - -	13507	22,356,414 – 22,356,531	+	5	118	95.34	-1.96	0.90	0.994914
8385	3R_DroMel_CAF1	22,357,416 – 22,357,521	- - - - - - - - -	13508	22,357,416 – 22,357,521	-	5	110	95.70	-2.04	0.90	0.996555
8386	3R_DroMel_CAF1	22,357,724 – 22,357,821	- - - - - - - - -	13509	22,357,724 – 22,357,821	+	5	120	76.74	-1.68	0.58	0.575778
8386	3R_DroMel_CAF1	22,357,724 – 22,357,821	- - - - - - - - -	13510	22,357,724 – 22,357,821	-	5	120	76.74	-1.13	0.82	0.791875
8387	3R_DroMel_CAF1	22,358,255 – 22,358,348	- - - - - - - - -	13511	22,358,255 – 22,358,348	-	6	120	84.64	-1.70	0.76	0.510772
8388	3R_DroMel_CAF1	22,358,360 – 22,358,463	- - - - - - - - -	13512	22,358,360 – 22,358,463	+	5	110	89.59	-2.20	0.73	0.828518
8389	3R_DroMel_CAF1	22,358,962 – 22,359,062	- - - - - - - - -	13513	22,358,962 – 22,359,062	+	5	120	80.19	-2.10	0.69	0.922372
8390	3R_DroMel_CAF1	22,359,156 – 22,359,254	- - - - - - - - -	13514	22,359,156 – 22,359,254	+	5	120	80.47	-2.93	0.67	0.995051
8390	3R_DroMel_CAF1	22,359,156 – 22,359,254	- - - - - - - - -	13515	22,359,156 – 22,359,254	-	5	120	80.47	-2.60	0.60	0.974669
8391	3R_DroMel_CAF1	22,360,225 – 22,360,344	- - - - - - - - -	13516	22,360,225 – 22,360,344	-	4	120	85.96	-1.42	0.82	0.545647
8392	3R_DroMel_CAF1	22,360,671 – 22,360,764	- - - - - - - - -	13517	22,360,671 – 22,360,764	+	4	93	97.85	-1.85	0.93	0.698945
8392	3R_DroMel_CAF1	22,360,671 – 22,360,764	- - - - - - - - -	13518	22,360,671 – 22,360,764	-	4	93	97.85	-2.95	0.93	0.949895
8393	3R_DroMel_CAF1	22,360,827 – 22,360,931	- - - - - - - - -	13519	22,360,827 – 22,360,931	+	4	120	88.13	-1.45	0.73	0.529499
8394	3R_DroMel_CAF1	22,362,305 – 22,362,425	- - - - - - - - -	13520	22,362,305 – 22,362,425	+	4	120	94.58	-1.41	0.92	0.560329
8394	3R_DroMel_CAF1	22,362,305 – 22,362,425	- - - - - - - - -	13521	22,362,305 – 22,362,425	-	4	120	94.58	-1.69	0.95	0.854333
8395	3R_DroMel_CAF1	22,362,693 – 22,362,883	- - - - - - - - -	13522	22,362,693 – 22,362,803	+	4	120	84.91	-2.53	0.67	0.922181
				13523	22,362,763 – 22,362,883	+	4	120	99.17	-2.42	1.00	0.908001
				13524	22,362,763 – 22,362,883	-	4	120	99.17	-2.22	1.00	0.864870
8396	3R_DroMel_CAF1	22,362,941 – 22,363,056	- - - - - - - - -	13525	22,362,941 – 22,363,056	+	4	118	87.79	-2.69	0.72	0.930286
8397	3R_DroMel_CAF1	22,364,424 – 22,364,553	- - - - - - - - -	13526	22,364,424 – 22,364,522	+	6	98	93.59	-1.46	0.88	0.756092
8397	3R_DroMel_CAF1	22,364,424 – 22,364,553	- - - - - - - - -	13527	22,364,450 – 22,364,553	+	5	112	76.15	-1.39	0.73	0.757380
8398	3R_DroMel_CAF1	22,365,199 – 22,365,294	- - - - - - - - -	13528	22,365,199 – 22,365,294	-	6	97	80.43	-2.43	0.60	0.879559
8399	3R_DroMel_CAF1	22,366,186 – 22,366,284	- - - - - - - - -	13529	22,366,186 – 22,366,284	+	6	98	76.35	-0.85	0.74	0.578921
8400	3R_DroMel_CAF1	22,366,549 – 22,366,649	- - - - - - - - -	13530	22,366,549 – 22,366,649	+	5	104	93.48	-1.40	0.87	0.823827
8401	3R_DroMel_CAF1	22,373,044 – 22,373,146	- - - - - - - - -	13531	22,373,044 – 22,373,146	-	6	115	82.70	-2.99	0.48	0.576682
8402	3R_DroMel_CAF1	22,374,286 – 22,374,376	- - - - - - - - -	13532	22,374,286 – 22,374,376	-	6	101	70.56	-3.38	0.30	0.997468
8403	3R_DroMel_CAF1	22,375,109 – 22,375,200	- - - - - - - - -	13533	22,375,109 – 22,375,200	+	5	91	85.01	-1.71	0.66	0.500000
8404	3R_DroMel_CAF1	22,375,225 – 22,375,315	- - - - - - - - -	13534	22,375,225 – 22,375,315	-	6	100	71.74	-1.80	0.43	0.649789
8405	3R_DroMel_CAF1	22,378,912 – 22,379,004	- - - - - - - - -	13535	22,378,912 – 22,379,004	+	5	108	83.24	-1.79	0.71	0.697186
8406	3R_DroMel_CAF1	22,379,060 – 22,379,161	- - - - - - - - -	13536	22,379,060 – 22,379,161	+	5	101	89.24	-3.19	0.83	0.999076
8406	3R_DroMel_CAF1	22,379,060 – 22,379,161	- - - - - - - - -	13537	22,379,060 – 22,379,161	-	5	101	89.24	-1.45	0.81	0.616778
8407	3R_DroMel_CAF1	22,392,711 – 22,392,805	- - - "knownCDS=Parent=FBtr0085020, FBtr0085021, FBtr0085019;Name=scrib-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5462-RC, FlyBase+Annotation+IDs:CG5462-RD, FlyBase+Annotation+IDs:CG5462-RB" - - - - -	13538	22,392,711 – 22,392,805	+	6	94	76.88	-2.19	0.49	0.857913
8408	3R_DroMel_CAF1	22,398,152 – 22,398,248	- - - - - - - - -	13539	22,398,152 – 22,398,248	-	6	100	88.22	-3.06	0.76	0.707070
8409	3R_DroMel_CAF1	22,401,851 – 22,401,942	- - - - - - - - -	13540	22,401,851 – 22,401,942	-	5	96	95.81	-2.79	0.93	0.999914
8410	3R_DroMel_CAF1	22,406,084 – 22,406,224	- - - "knownCDS=Parent=FBtr0085021, FBtr0085019;Name=scrib-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5462-RD, FlyBase+Annotation+IDs:CG5462-RB" - - - - -	13541	22,406,084 – 22,406,184	-	6	106	65.40	-1.29	0.54	0.631587
				13542	22,406,113 – 22,406,224	+	6	111	71.10	-1.56	0.71	0.971445
				13543	22,406,113 – 22,406,224	-	6	111	71.10	-1.33	0.67	0.890796
8411	3R_DroMel_CAF1	22,412,374 – 22,412,470	- - - "knownCDS=Parent=FBtr0085022;Name=CG31082-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31082-RA" - - - - -	13544	22,412,374 – 22,412,470	+	6	102	82.93	-2.27	0.75	0.805506
8412	3R_DroMel_CAF1	22,412,880 – 22,412,986	- - - - - - - - -	13545	22,412,880 – 22,412,986	-	5	109	83.63	-1.80	0.77	0.761734
8413	3R_DroMel_CAF1	22,422,229 – 22,422,327	- - - - - - - - -	13546	22,422,229 – 22,422,327	+	6	112	77.56	-2.38	0.61	0.968540
8414	3R_DroMel_CAF1	22,424,868 – 22,425,027	- - - "knownCDS=Parent=FBtr0085028;Name=CG5467-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5467-RA" - - - - -	13547	22,424,868 – 22,424,988	+	6	120	87.89	-2.26	0.78	0.557697
8414	3R_DroMel_CAF1	22,424,868 – 22,425,027		13548	22,424,908 – 22,425,027	-	6	120	86.72	-1.87	0.82	0.622098
8415	3R_DroMel_CAF1	22,428,091 – 22,428,208	- - - "knownCDS=Parent=FBtr0085028;Name=CG5467-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5467-RA" - - - - -	13549	22,428,091 – 22,428,208	+	6	120	83.33	-1.73	0.76	0.630636
8416	3R_DroMel_CAF1	22,432,179 – 22,432,304	- - - - - - - - -	13550	22,432,179 – 22,432,276	+	6	115	84.21	-2.74	0.69	0.687925
				13551	22,432,179 – 22,432,276	-	6	115	84.21	-1.83	0.74	0.549647
				13552	22,432,214 – 22,432,304	+	6	115	83.41	-2.06	0.72	0.662111
				13553	22,432,214 – 22,432,304	-	6	115	83.41	-2.30	0.78	0.820321
8417	3R_DroMel_CAF1	22,433,946 – 22,434,053	- - - - - - - - -	13554	22,433,946 – 22,434,053	-	6	119	71.65	-2.04	0.52	0.962113
8418	3R_DroMel_CAF1	22,435,915 – 22,436,016	- - - - - - - - -	13555	22,435,915 – 22,436,016	+	6	120	80.24	-2.94	0.53	0.933621
8418	3R_DroMel_CAF1	22,435,915 – 22,436,016	- - - - - - - - -	13556	22,435,915 – 22,436,016	-	6	120	80.24	-3.59	0.41	0.942313
8419	3R_DroMel_CAF1	22,436,198 – 22,436,308	- - - - - - - - -	13557	22,436,198 – 22,436,308	+	6	115	71.68	-2.08	0.34	0.741386
8419	3R_DroMel_CAF1	22,436,198 – 22,436,308	- - - - - - - - -	13558	22,436,198 – 22,436,308	-	6	115	71.68	-2.05	0.31	0.623276
8420	3R_DroMel_CAF1	22,442,241 – 22,442,335	- - - - - - - - -	13559	22,442,241 – 22,442,335	-	6	111	80.94	-1.95	0.62	0.723834
8421	3R_DroMel_CAF1	22,447,066 – 22,447,176	- - - - - - - - -	13560	22,447,066 – 22,447,176	+	6	117	74.41	-1.85	0.55	0.892199
8421	3R_DroMel_CAF1	22,447,066 – 22,447,176	- - - - - - - - -	13561	22,447,066 – 22,447,176	-	6	117	74.41	-1.65	0.54	0.679915
8422	3R_DroMel_CAF1	22,449,027 – 22,449,132	- - - "knownCDS=Parent=FBtr0085057;Name=CG6478-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6478-RA" - - - - -	13562	22,449,027 – 22,449,132	+	6	120	78.27	-1.60	0.65	0.802089
8423	3R_DroMel_CAF1	22,451,383 – 22,451,499	- - - - - - - - -	13563	22,451,383 – 22,451,499	+	6	120	81.49	-1.82	0.61	0.581261
8424	3R_DroMel_CAF1	22,455,196 – 22,455,292	- - - - - - - - -	13564	22,455,196 – 22,455,292	+	6	101	81.83	-2.62	0.71	0.892353
8424	3R_DroMel_CAF1	22,455,196 – 22,455,292	- - - - - - - - -	13565	22,455,196 – 22,455,292	-	6	101	81.83	-2.26	0.63	0.752713
8425	3R_DroMel_CAF1	22,457,526 – 22,457,632	- - - - - - - - -	13566	22,457,526 – 22,457,632	-	6	108	68.51	-2.38	0.27	0.898378
8426	3R_DroMel_CAF1	22,459,050 – 22,459,151	- - - - - - - - -	13567	22,459,050 – 22,459,151	+	6	114	81.89	-1.56	0.64	0.500000
8427	3R_DroMel_CAF1	22,460,516 – 22,460,653	- - - "knownCDS=Parent=FBtr0085033;Name=CG31081-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31081-RA" - - - - -	13568	22,460,516 – 22,460,613	-	6	109	77.89	-3.44	0.63	0.992196
8427	3R_DroMel_CAF1	22,460,516 – 22,460,653		13569	22,460,536 – 22,460,653	-	6	117	86.67	-2.68	0.84	0.934069
8428	3R_DroMel_CAF1	22,465,189 – 22,465,279	- - - - - - - - -	13570	22,465,189 – 22,465,279	-	5	99	82.57	-2.31	0.54	0.717758
8429	3R_DroMel_CAF1	22,475,189 – 22,475,305	- - - - - - - - -	13571	22,475,189 – 22,475,305	-	6	118	76.01	-1.04	0.73	0.731538
8430	3R_DroMel_CAF1	22,482,420 – 22,482,517	- - - "knownCDS=Parent=FBtr0085036;Name=CG5480-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5480-RA" - - - - -	13572	22,482,420 – 22,482,517	+	4	111	64.90	-2.72	0.40	0.945087
8431	3R_DroMel_CAF1	22,484,126 – 22,484,257	- - - - - - - - -	13573	22,484,126 – 22,484,225	+	6	102	82.52	-3.56	0.64	0.920261
				13574	22,484,126 – 22,484,225	-	6	102	82.52	-3.07	0.62	0.857050
				13575	22,484,151 – 22,484,257	+	6	120	82.10	-2.54	0.67	0.838785
8432	3R_DroMel_CAF1	22,485,841 – 22,485,935	- - - - - - - - -	13576	22,485,841 – 22,485,935	+	3	96	77.62	-3.07	0.82	0.999678
8433	3R_DroMel_CAF1	22,486,287 – 22,486,427	- - - - - - - - -	13577	22,486,287 – 22,486,398	+	5	111	84.47	-3.51	0.92	0.999749
				13578	22,486,287 – 22,486,398	-	5	111	84.47	-1.80	0.67	0.586857
				13579	22,486,319 – 22,486,427	+	5	108	88.57	-1.71	0.80	0.797533
8434	3R_DroMel_CAF1	22,486,700 – 22,486,817	- - - - - - - - -	13580	22,486,700 – 22,486,817	+	6	117	82.78	-1.72	0.72	0.633748
8434	3R_DroMel_CAF1	22,486,700 – 22,486,817	- - - - - - - - -	13581	22,486,700 – 22,486,817	-	6	117	82.78	-2.20	0.73	0.780074
8435	3R_DroMel_CAF1	22,497,364 – 22,497,502	- - - - - - - - -	13582	22,497,364 – 22,497,462	-	6	98	87.21	-2.47	0.80	0.761230
8435	3R_DroMel_CAF1	22,497,364 – 22,497,502	- - - - - - - - -	13583	22,497,387 – 22,497,502	-	6	120	78.55	-2.26	0.63	0.943927
8436	3R_DroMel_CAF1	22,497,896 – 22,497,987	- - - - - - - - -	13584	22,497,896 – 22,497,987	-	6	96	79.09	-1.85	0.60	0.770913
8437	3R_DroMel_CAF1	22,500,266 – 22,500,364	- - - - - - - - -	13585	22,500,266 – 22,500,364	+	6	111	80.12	-2.00	0.61	0.787789
8438	3R_DroMel_CAF1	22,502,446 – 22,502,551	- - - - - - - - -	13586	22,502,446 – 22,502,551	-	6	118	75.65	-2.08	0.40	0.602565
8439	3R_DroMel_CAF1	22,504,046 – 22,504,141	- - - - - - - - -	13587	22,504,046 – 22,504,141	-	6	103	82.89	-1.76	0.74	0.659145
8440	3R_DroMel_CAF1	22,507,824 – 22,507,914	- - - - - - - - -	13588	22,507,824 – 22,507,914	+	6	107	76.13	-1.53	0.61	0.736797
8441	3R_DroMel_CAF1	22,511,497 – 22,511,600	- - - - - - - - -	13589	22,511,497 – 22,511,600	-	5	112	76.74	-1.78	0.65	0.847924
8442	3R_DroMel_CAF1	22,511,685 – 22,511,793	- - - - - - - - -	13590	22,511,685 – 22,511,793	-	5	119	88.84	-2.16	0.87	0.991844
8443	3R_DroMel_CAF1	22,511,882 – 22,511,992	- - - - - - - - -	13591	22,511,882 – 22,511,992	-	5	114	87.51	-1.81	0.69	0.537361
8444	3R_DroMel_CAF1	22,514,321 – 22,514,414	- - - - - - - - -	13592	22,514,321 – 22,514,414	-	6	96	80.64	-1.16	0.79	0.580629
8445	3R_DroMel_CAF1	22,520,607 – 22,520,697	- - - - - - - - -	13593	22,520,607 – 22,520,697	+	6	116	77.67	-1.81	0.67	0.917286
8446	3R_DroMel_CAF1	22,525,827 – 22,525,923	- - - "knownCDS=Parent=FBtr0085048;Name=amon-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6438-RA" - - - - -	13594	22,525,827 – 22,525,923	-	6	107	78.03	-1.56	0.68	0.844389
8447	3R_DroMel_CAF1	22,526,125 – 22,526,228	- - - "knownCDS=Parent=FBtr0085048;Name=amon-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6438-RA" - - - - -	13595	22,526,125 – 22,526,228	+	6	105	80.60	-1.62	0.62	0.581761
8448	3R_DroMel_CAF1	22,527,201 – 22,527,308	- - - "knownCDS=Parent=FBtr0085048;Name=amon-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6438-RA" - - - - -	13596	22,527,201 – 22,527,308	-	6	118	79.40	-1.94	0.60	0.790936
8449	3R_DroMel_CAF1	22,531,230 – 22,531,353	- - - - - - - - -	13597	22,531,230 – 22,531,321	+	5	100	70.73	-1.99	0.35	0.895768
8449	3R_DroMel_CAF1	22,531,230 – 22,531,353	- - - - - - - - -	13598	22,531,254 – 22,531,353	+	6	114	80.52	-2.41	0.58	0.855814
8450	3R_DroMel_CAF1	22,546,900 – 22,547,005	- - - "knownCDS=Parent=FBtr0085046;Name=CG6420-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6420-RA" - - - - -	13599	22,546,900 – 22,547,005	-	6	105	80.82	-1.62	0.64	0.630149
8451	3R_DroMel_CAF1	22,547,438 – 22,547,531	- - - "knownCDS=Parent=FBtr0085046;Name=CG6420-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6420-RA" - - - - -	13600	22,547,438 – 22,547,531	+	6	108	82.55	-2.71	0.77	0.910009
8451	3R_DroMel_CAF1	22,547,438 – 22,547,531		13601	22,547,438 – 22,547,531	-	6	108	82.55	-2.63	0.69	0.833270
8452	3R_DroMel_CAF1	22,547,628 – 22,547,718	- - - "knownCDS=Parent=FBtr0085046;Name=CG6420-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6420-RA" - - - - -	13602	22,547,628 – 22,547,718	-	6	90	80.00	-1.62	0.65	0.703446
8453	3R_DroMel_CAF1	22,548,616 – 22,548,706	- - - - - - - - -	13603	22,548,616 – 22,548,706	+	6	90	78.18	-1.11	0.71	0.619991
8454	3R_DroMel_CAF1	22,549,703 – 22,549,795	- - - - - - - - -	13604	22,549,703 – 22,549,795	-	6	105	80.03	-2.17	0.58	0.816448
8455	3R_DroMel_CAF1	22,554,228 – 22,554,321	- - - - - - - - -	13605	22,554,228 – 22,554,321	+	4	93	95.16	-2.27	0.93	0.966225
8455	3R_DroMel_CAF1	22,554,228 – 22,554,321	- - - - - - - - -	13606	22,554,228 – 22,554,321	-	4	93	95.16	-1.60	0.93	0.723391
8456	3R_DroMel_CAF1	22,556,637 – 22,556,735	- - - - - - - - -	13607	22,556,637 – 22,556,735	+	6	111	77.09	-0.99	0.70	0.534222
8456	3R_DroMel_CAF1	22,556,637 – 22,556,735	- - - - - - - - -	13608	22,556,637 – 22,556,735	-	6	111	77.09	-3.03	0.86	0.976857
8457	3R_DroMel_CAF1	22,557,870 – 22,557,965	- - - - - - - - -	13609	22,557,870 – 22,557,965	-	6	104	77.25	-1.72	0.56	0.690537
8458	3R_DroMel_CAF1	22,563,593 – 22,563,688	- - - "knownCDS=Parent=FBtr0085043;Name=CG14247-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14247-RA" - - - - -	13610	22,563,593 – 22,563,688	-	6	107	79.53	-1.87	0.60	0.744802
8459	3R_DroMel_CAF1	22,564,534 – 22,564,635	- - - - - - - - -	13611	22,564,534 – 22,564,635	+	6	120	82.94	-2.21	0.61	0.554145
8460	3R_DroMel_CAF1	22,565,144 – 22,565,265	- - - - - - - - -	13612	22,565,144 – 22,565,236	+	6	107	78.01	-1.54	0.59	0.604567
8460	3R_DroMel_CAF1	22,565,144 – 22,565,265	- - - - - - - - -	13613	22,565,170 – 22,565,265	-	6	97	80.93	-1.99	0.55	0.524537
8461	3R_DroMel_CAF1	22,566,523 – 22,566,613	- - - - - - - - -	13614	22,566,523 – 22,566,613	-	6	105	78.83	-2.04	0.47	0.511188
8462	3R_DroMel_CAF1	22,568,570 – 22,568,676	- - - - - - - - -	13615	22,568,570 – 22,568,676	+	6	117	76.07	-1.58	0.55	0.575703
8463	3R_DroMel_CAF1	22,569,465 – 22,569,558	- - - - - - - - -	13616	22,569,465 – 22,569,558	-	4	100	82.91	-1.58	0.83	0.681748
8464	3R_DroMel_CAF1	22,570,344 – 22,570,474	- - - - - - - - -	13617	22,570,344 – 22,570,438	-	6	120	73.23	-1.61	0.65	0.939896
				13618	22,570,360 – 22,570,474	+	6	120	80.74	-1.72	0.70	0.781317
				13619	22,570,360 – 22,570,474	-	6	120	80.74	-4.25	0.82	0.966566
8465	3R_DroMel_CAF1	22,573,771 – 22,573,861	- - - - - - - - -	13620	22,573,771 – 22,573,861	+	6	100	81.03	-2.27	0.58	0.754313
8466	3R_DroMel_CAF1	22,574,888 – 22,575,003	- - - - - - - - -	13621	22,574,888 – 22,575,003	-	5	116	77.94	-1.67	0.19	0.519053
8467	3R_DroMel_CAF1	22,579,079 – 22,579,170	- - - - - - - - -	13622	22,579,079 – 22,579,170	+	6	99	80.76	-2.31	0.59	0.817061
8468	3R_DroMel_CAF1	22,586,605 – 22,586,699	- - - - - - - - -	13623	22,586,605 – 22,586,699	+	6	109	76.39	-1.87	0.49	0.632620
8468	3R_DroMel_CAF1	22,586,605 – 22,586,699	- - - - - - - - -	13624	22,586,605 – 22,586,699	-	6	109	76.39	-1.17	0.65	0.525527
8469	3R_DroMel_CAF1	22,589,138 – 22,589,238	- - - - - - - - -	13625	22,589,138 – 22,589,238	-	6	101	95.65	-0.86	0.95	0.634316
8470	3R_DroMel_CAF1	22,594,876 – 22,594,976	- - - - - - - - -	13626	22,594,876 – 22,594,976	+	4	104	84.03	-2.09	0.67	0.828001
8471	3R_DroMel_CAF1	22,602,405 – 22,602,504	- - - - - - - - -	13627	22,602,405 – 22,602,504	+	6	107	78.26	-3.74	0.63	0.991625
8471	3R_DroMel_CAF1	22,602,405 – 22,602,504	- - - - - - - - -	13628	22,602,405 – 22,602,504	-	6	107	78.26	-2.83	0.59	0.981674
8472	3R_DroMel_CAF1	22,606,147 – 22,606,277	- - - - - - - - -	13629	22,606,147 – 22,606,242	+	5	120	78.65	-2.49	0.67	0.988938
				13630	22,606,178 – 22,606,277	+	5	115	81.60	-3.14	0.83	0.998223
				13631	22,606,178 – 22,606,277	-	5	115	81.60	-1.79	0.81	0.827117
8473	3R_DroMel_CAF1	22,606,329 – 22,606,424	- - - - - - - - -	13632	22,606,329 – 22,606,424	-	6	98	77.99	-1.29	0.63	0.542463
8474	3R_DroMel_CAF1	22,606,452 – 22,606,565	- - - - - - - - -	13633	22,606,452 – 22,606,565	-	6	119	75.73	-1.69	0.55	0.722782
8475	3R_DroMel_CAF1	22,608,114 – 22,608,208	- - - - - - - - -	13634	22,608,114 – 22,608,208	+	4	97	86.81	-2.69	0.79	0.977818
8476	3R_DroMel_CAF1	22,616,020 – 22,616,121	- - - - - - - - -	13635	22,616,020 – 22,616,121	-	5	101	95.74	-1.97	0.86	0.976778
8477	3R_DroMel_CAF1	22,618,470 – 22,618,565	- - - - - - - - -	13636	22,618,470 – 22,618,565	+	5	110	71.33	-1.97	0.25	0.895600
8478	3R_DroMel_CAF1	22,620,540 – 22,620,659	- - - - - - - - -	13637	22,620,540 – 22,620,630	+	6	95	81.47	-1.64	0.82	0.787759
				13638	22,620,540 – 22,620,630	-	6	95	81.47	-2.11	0.67	0.802944
				13639	22,620,555 – 22,620,659	+	6	109	77.32	-2.01	0.66	0.951403
				13640	22,620,555 – 22,620,659	-	6	109	77.32	-1.63	0.54	0.500000
8479	3R_DroMel_CAF1	22,621,197 – 22,621,288	- - - - - - - - -	13641	22,621,197 – 22,621,288	+	6	93	84.18	-3.69	0.68	0.874703
8479	3R_DroMel_CAF1	22,621,197 – 22,621,288	- - - - - - - - -	13642	22,621,197 – 22,621,288	-	6	93	84.18	-3.64	0.74	0.915491
8480	3R_DroMel_CAF1	22,623,964 – 22,624,206	- - - - - - - - -	13643	22,623,964 – 22,624,071	+	5	117	87.95	-1.67	0.71	0.515547
				13644	22,623,991 – 22,624,099	+	5	108	94.54	-2.20	0.84	0.988342
				13645	22,623,991 – 22,624,099	-	5	108	94.54	-1.36	0.85	0.691621
				13646	22,624,071 – 22,624,170	+	5	99	90.61	-2.61	0.89	0.999548
				13647	22,624,099 – 22,624,206	+	5	111	79.56	-2.34	0.73	0.980363
8481	3R_DroMel_CAF1	22,630,299 – 22,630,390	- - - - - - - - -	13648	22,630,299 – 22,630,390	-	6	102	81.18	-2.72	0.57	0.864339
8482	3R_DroMel_CAF1	22,630,945 – 22,631,046	- - - - - - - - -	13649	22,630,945 – 22,631,046	+	6	101	92.21	-2.59	0.89	0.995436
8483	3R_DroMel_CAF1	22,631,411 – 22,631,520	- - - - - - - - -	13650	22,631,411 – 22,631,520	+	6	114	96.69	-3.06	0.93	0.999906
8483	3R_DroMel_CAF1	22,631,411 – 22,631,520	- - - - - - - - -	13651	22,631,411 – 22,631,520	-	6	114	96.69	-2.40	0.90	0.997462
8484	3R_DroMel_CAF1	22,635,746 – 22,635,837	- - - - - - - - -	13652	22,635,746 – 22,635,837	-	6	100	87.45	-1.84	0.82	0.595728
8485	3R_DroMel_CAF1	22,638,524 – 22,638,661	- - - - - - - - -	13653	22,638,524 – 22,638,632	+	6	108	91.67	-1.79	0.88	0.909488
8485	3R_DroMel_CAF1	22,638,524 – 22,638,661	- - - - - - - - -	13654	22,638,561 – 22,638,661	+	6	102	79.41	-1.24	0.70	0.634662
8486	3R_DroMel_CAF1	22,643,211 – 22,643,301	- - - - - - - - -	13655	22,643,211 – 22,643,301	-	5	92	96.36	-2.79	0.84	0.995263
8487	3R_DroMel_CAF1	22,643,934 – 22,644,037	- - - - - - - - -	13656	22,643,934 – 22,644,037	+	5	107	88.27	-1.96	0.70	0.628975
8488	3R_DroMel_CAF1	22,644,664 – 22,644,762	- - - - - - - - -	13657	22,644,664 – 22,644,762	-	6	120	79.06	-1.73	0.58	0.634943
8489	3R_DroMel_CAF1	22,653,390 – 22,653,487	- - - - - - - - -	13658	22,653,390 – 22,653,487	+	5	102	75.66	-1.72	0.29	0.566446
8489	3R_DroMel_CAF1	22,653,390 – 22,653,487	- - - - - - - - -	13659	22,653,390 – 22,653,487	-	5	102	75.66	-1.93	0.32	0.799952
8490	3R_DroMel_CAF1	22,654,985 – 22,655,094	- - - - - - - - -	13660	22,654,985 – 22,655,094	-	6	118	79.60	-2.65	0.48	0.856209
8491	3R_DroMel_CAF1	22,670,313 – 22,670,413	- - - - - - - - -	13661	22,670,313 – 22,670,413	-	5	106	86.15	-2.57	0.72	0.940320
8492	3R_DroMel_CAF1	22,674,041 – 22,674,142	- - - - - - - - -	13662	22,674,041 – 22,674,142	-	6	106	76.36	-1.64	0.58	0.733506
8493	3R_DroMel_CAF1	22,680,764 – 22,680,856	- - - - - - - - -	13663	22,680,764 – 22,680,856	-	6	93	79.52	-1.76	0.75	0.887321
8494	3R_DroMel_CAF1	22,682,296 – 22,682,388	- - - - - - - - -	13664	22,682,296 – 22,682,388	+	5	95	86.44	-1.91	0.73	0.748618
8494	3R_DroMel_CAF1	22,682,296 – 22,682,388	- - - - - - - - -	13665	22,682,296 – 22,682,388	-	5	95	86.44	-2.47	0.71	0.914077
8495	3R_DroMel_CAF1	22,685,461 – 22,685,562	- - - - - - - - -	13666	22,685,461 – 22,685,562	-	6	103	69.57	-2.04	0.46	0.951565
8496	3R_DroMel_CAF1	22,689,185 – 22,689,303	- - - "knownCDS=Parent=FBtr0085061;Name=CG5491-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5491-RA" - - - - -	13667	22,689,185 – 22,689,303	-	6	119	75.44	-2.05	0.45	0.759649
8497	3R_DroMel_CAF1	22,690,973 – 22,691,074	- - - "knownCDS=Parent=FBtr0085095;Name=ball-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6386-RA" - - - - -	13668	22,690,973 – 22,691,074	+	6	102	79.40	-2.18	0.54	0.785866
8498	3R_DroMel_CAF1	22,692,839 – 22,692,936	- - - - - - - - -	13669	22,692,839 – 22,692,936	+	4	104	83.33	-1.53	0.67	0.505577
8498	3R_DroMel_CAF1	22,692,839 – 22,692,936	- - - - - - - - -	13670	22,692,839 – 22,692,936	-	4	104	83.33	-2.24	0.72	0.934900
8499	3R_DroMel_CAF1	22,697,167 – 22,697,260	- - - - - - - - -	13671	22,697,167 – 22,697,260	+	6	114	64.67	-2.30	0.48	0.986418
8499	3R_DroMel_CAF1	22,697,167 – 22,697,260	- - - - - - - - -	13672	22,697,167 – 22,697,260	-	6	114	64.67	-2.34	0.28	0.887921
8500	3R_DroMel_CAF1	22,699,602 – 22,699,702	- - - "knownCDS=Parent=FBtr0100340;Name=Rb97D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6354-RI" - - - - -	13673	22,699,602 – 22,699,702	+	6	100	81.67	-1.24	0.72	0.509497
8501	3R_DroMel_CAF1	22,699,845 – 22,699,949	- - - "knownCDS=Parent=FBtr0100337, FBtr0100338, FBtr0100339, FBtr0100340;Name=Rb97D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6354-RF, FlyBase+Annotation+IDs:CG6354-RG, FlyBase+Annotation+IDs:CG6354-RH, FlyBase+Annotation+IDs:CG6354-RI" - - - - -	13674	22,699,845 – 22,699,949	+	6	113	71.67	-2.07	0.44	0.916291
8502	3R_DroMel_CAF1	22,700,544 – 22,700,647	- - - - - - - - -	13675	22,700,544 – 22,700,647	-	6	107	72.93	-1.69	0.60	0.917703
8503	3R_DroMel_CAF1	22,701,657 – 22,701,774	- - - "knownCDS=Parent=FBtr0085063;Name=ms(3)K81-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14251-RA" - - - - -	13676	22,701,657 – 22,701,774	-	5	120	91.37	-1.84	0.75	0.677411
8504	3R_DroMel_CAF1	22,701,968 – 22,702,085	- - - "knownCDS=Parent=FBtr0085063;Name=ms(3)K81-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14251-RA" - - - - -	13677	22,701,968 – 22,702,085	+	4	117	79.20	-2.67	0.68	0.995119
8505	3R_DroMel_CAF1	22,707,379 – 22,707,483	- - - - - - - - -	13678	22,707,379 – 22,707,483	+	5	105	88.31	-1.99	0.75	0.830948
8506	3R_DroMel_CAF1	22,708,641 – 22,708,736	- - - - - - - - -	13679	22,708,641 – 22,708,736	+	6	120	68.73	-2.71	0.38	0.994823
8507	3R_DroMel_CAF1	22,710,663 – 22,710,769	- - - - - - - - -	13680	22,710,663 – 22,710,769	-	6	112	91.72	-1.06	0.92	0.541547
8508	3R_DroMel_CAF1	22,711,992 – 22,712,089	- - - - - - - - -	13681	22,711,992 – 22,712,089	+	5	97	93.51	-1.42	0.80	0.518356
8509	3R_DroMel_CAF1	22,715,424 – 22,715,522	- - - - - - - - -	13682	22,715,424 – 22,715,522	-	6	120	78.21	-1.15	0.67	0.551082
8510	3R_DroMel_CAF1	22,716,152 – 22,716,294	- - - - - - - - -	13683	22,716,152 – 22,716,254	+	6	117	81.34	-3.71	0.63	0.962772
				13684	22,716,152 – 22,716,254	-	6	117	81.34	-4.24	0.71	0.969612
				13685	22,716,191 – 22,716,294	-	5	112	85.29	-2.33	0.69	0.861304
8511	3R_DroMel_CAF1	22,716,488 – 22,716,584	- - - - - - - - -	13686	22,716,488 – 22,716,584	-	6	102	76.75	-2.53	0.58	0.982528
8512	3R_DroMel_CAF1	22,720,227 – 22,720,317	- - - - - - - - -	13687	22,720,227 – 22,720,317	-	6	90	77.49	-3.12	0.51	0.991322
8513	3R_DroMel_CAF1	22,721,022 – 22,721,113	- - - - - - - - -	13688	22,721,022 – 22,721,113	+	5	93	90.92	-1.39	0.82	0.614793
8513	3R_DroMel_CAF1	22,721,022 – 22,721,113	- - - - - - - - -	13689	22,721,022 – 22,721,113	-	5	93	90.92	-1.43	0.81	0.619788
8514	3R_DroMel_CAF1	22,732,064 – 22,732,160	- - - - - - - - -	13690	22,732,064 – 22,732,160	-	6	102	79.59	-1.46	0.78	0.811112
8515	3R_DroMel_CAF1	22,733,121 – 22,733,220	- - - - - - - - -	13691	22,733,121 – 22,733,220	+	5	111	71.15	-2.05	0.63	0.987476
8515	3R_DroMel_CAF1	22,733,121 – 22,733,220	- - - - - - - - -	13692	22,733,121 – 22,733,220	-	5	111	71.15	-1.63	0.54	0.647769
8516	3R_DroMel_CAF1	22,734,085 – 22,734,185	- - - - - - - - -	13693	22,734,085 – 22,734,185	+	5	101	85.90	-1.99	0.72	0.767860
8517	3R_DroMel_CAF1	22,735,574 – 22,735,694	- - - "knownCDS=Parent=FBtr0085065;Name=T48-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5507-RA" - - - - -	13694	22,735,574 – 22,735,694	-	6	120	81.67	-1.51	0.66	0.540103
8518	3R_DroMel_CAF1	22,744,875 – 22,744,966	- - - - - - - - -	13695	22,744,875 – 22,744,966	+	5	97	93.79	-1.96	0.88	0.992540
8519	3R_DroMel_CAF1	22,746,766 – 22,746,863	- - - - - - - - -	13696	22,746,766 – 22,746,863	+	6	103	73.34	-1.90	0.47	0.795269
8520	3R_DroMel_CAF1	22,747,877 – 22,747,969	- - - - - - - - -	13697	22,747,877 – 22,747,969	-	5	96	75.89	-1.76	0.71	0.932269
8521	3R_DroMel_CAF1	22,754,842 – 22,754,948	- - - - - - - - -	13698	22,754,842 – 22,754,948	-	6	108	75.02	-2.64	0.29	0.852678
8522	3R_DroMel_CAF1	22,755,468 – 22,755,577	- - - - - - - - -	13699	22,755,468 – 22,755,577	+	3	111	77.95	-1.39	0.79	0.777458
8523	3R_DroMel_CAF1	22,756,008 – 22,756,110	- - - - - - - - -	13700	22,756,008 – 22,756,110	+	4	116	74.16	-1.96	0.64	0.959865
8524	3R_DroMel_CAF1	22,756,227 – 22,756,328	- - - - - - - - -	13701	22,756,227 – 22,756,328	+	4	101	72.70	-2.57	0.39	0.734130
8525	3R_DroMel_CAF1	22,757,717 – 22,757,867	- - - - - - - - -	13702	22,757,717 – 22,757,833	+	4	120	85.09	-1.65	0.66	0.570181
8525	3R_DroMel_CAF1	22,757,717 – 22,757,867	- - - - - - - - -	13703	22,757,753 – 22,757,867	-	4	120	84.62	-1.95	0.65	0.715645
8526	3R_DroMel_CAF1	22,757,965 – 22,758,103	- - - - - - - - -	13704	22,757,965 – 22,758,063	+	4	118	72.70	-2.03	0.56	0.935050
8526	3R_DroMel_CAF1	22,757,965 – 22,758,103	- - - - - - - - -	13705	22,758,003 – 22,758,103	+	4	118	74.62	-1.55	0.62	0.523018
8527	3R_DroMel_CAF1	22,758,161 – 22,758,260	- - - - - - - - -	13706	22,758,161 – 22,758,260	-	3	102	94.04	-1.70	0.93	0.656225
8528	3R_DroMel_CAF1	22,758,893 – 22,758,999	- - - - - - - - -	13707	22,758,893 – 22,758,999	+	4	108	86.50	-2.89	0.70	0.951821
8529	3R_DroMel_CAF1	22,764,126 – 22,764,246	- - - - - - - - -	13708	22,764,126 – 22,764,246	-	6	120	76.08	-0.80	0.73	0.517890
8530	3R_DroMel_CAF1	22,764,385 – 22,764,475	- - - - - - - - -	13709	22,764,385 – 22,764,475	-	6	94	87.80	-2.00	0.80	0.527636
8531	3R_DroMel_CAF1	22,769,419 – 22,769,520	- - - - - - - - -	13710	22,769,419 – 22,769,520	-	6	106	80.54	-1.57	0.61	0.541893
8532	3R_DroMel_CAF1	22,769,965 – 22,770,074	- - - "knownCDS=Parent=FBtr0085066;Name=sda-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5518-RA" - - - - -	13711	22,769,965 – 22,770,074	+	6	115	79.17	-1.52	0.67	0.758334
8532	3R_DroMel_CAF1	22,769,965 – 22,770,074		13712	22,769,965 – 22,770,074	-	6	115	79.17	-1.65	0.75	0.878349
8533	3R_DroMel_CAF1	22,775,112 – 22,775,202	- - - "knownCDS=Parent=FBtr0085068;Name=CG18472-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18472-RA" - - - - -	13713	22,775,112 – 22,775,202	-	6	99	77.75	-1.98	0.58	0.876868
8534	3R_DroMel_CAF1	22,781,963 – 22,782,059	- - - - - - - - -	13714	22,781,963 – 22,782,059	-	5	101	90.58	-2.65	0.68	0.653507
8535	3R_DroMel_CAF1	22,786,550 – 22,786,640	- - - - - - - - -	13715	22,786,550 – 22,786,640	-	6	94	77.39	-1.59	0.55	0.508376
8536	3R_DroMel_CAF1	22,790,292 – 22,790,436	- - - "knownCDS=Parent=FBtr0085082, FBtr0085083;Name=Tsp97E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6323-RA, FlyBase+Annotation+IDs:CG6323-RB" - - - - -	13716	22,790,292 – 22,790,397	-	6	110	72.14	-2.53	0.40	0.985932
8536	3R_DroMel_CAF1	22,790,292 – 22,790,436		13717	22,790,322 – 22,790,436	-	6	120	81.48	-2.04	0.61	0.691072
8537	3R_DroMel_CAF1	22,791,508 – 22,791,628	- - - "knownCDS=Parent=FBtr0085081;Name=Gr97a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33083-RA" - - - - -	13718	22,791,508 – 22,791,628	-	6	120	81.89	-1.73	0.63	0.548296
8538	3R_DroMel_CAF1	22,796,484 – 22,796,586	- - - - - - - - -	13719	22,796,484 – 22,796,586	+	6	102	84.31	-1.71	0.78	0.576570
8539	3R_DroMel_CAF1	22,802,173 – 22,802,274	- - - "knownCDS=Parent=FBtr0085069;Name=CG5521-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5521-RA" - - - - -	13720	22,802,173 – 22,802,274	-	6	107	79.12	-2.19	0.72	0.945682
8540	3R_DroMel_CAF1	22,811,065 – 22,811,202	- - - - - - - - -	13721	22,811,065 – 22,811,171	+	5	106	89.34	-1.54	0.75	0.529555
				13722	22,811,065 – 22,811,171	-	5	106	89.34	-2.53	0.82	0.992653
				13723	22,811,092 – 22,811,202	+	5	110	91.00	-1.87	0.78	0.851766
				13724	22,811,092 – 22,811,202	-	5	110	91.00	-2.57	0.81	0.992290
8541	3R_DroMel_CAF1	22,812,847 – 22,812,991	- - - - - - - - -	13725	22,812,847 – 22,812,951	-	5	118	82.93	-2.36	0.67	0.915654
8541	3R_DroMel_CAF1	22,812,847 – 22,812,991	- - - - - - - - -	13726	22,812,886 – 22,812,991	-	5	119	82.14	-2.41	0.69	0.952680
8542	3R_DroMel_CAF1	22,813,472 – 22,813,626	- - - - - - - - -	13727	22,813,472 – 22,813,592	+	4	120	79.72	-2.48	0.62	0.972146
8542	3R_DroMel_CAF1	22,813,472 – 22,813,626	- - - - - - - - -	13728	22,813,512 – 22,813,626	+	3	114	85.38	-3.59	0.72	0.968156
8543	3R_DroMel_CAF1	22,814,842 – 22,814,977	- - - - - - - - -	13729	22,814,842 – 22,814,937	+	5	95	96.42	-2.16	0.89	0.995426
8543	3R_DroMel_CAF1	22,814,842 – 22,814,977	- - - - - - - - -	13730	22,814,882 – 22,814,977	+	5	95	93.02	-1.11	0.96	0.686687
8544	3R_DroMel_CAF1	22,815,942 – 22,816,039	- - - - - - - - -	13731	22,815,942 – 22,816,039	+	6	116	73.10	-2.27	0.35	0.865159
8545	3R_DroMel_CAF1	22,816,165 – 22,816,328	- - - - - - - - -	13732	22,816,165 – 22,816,259	+	5	96	96.02	-1.74	0.90	0.976823
				13733	22,816,187 – 22,816,289	+	6	120	82.32	-2.08	0.58	0.513433
				13734	22,816,222 – 22,816,328	+	6	120	81.71	-1.84	0.60	0.526164
8546	3R_DroMel_CAF1	22,817,497 – 22,817,606	- - - - - - - - -	13735	22,817,497 – 22,817,606	-	5	109	92.12	-1.57	0.79	0.672484
8547	3R_DroMel_CAF1	22,818,278 – 22,818,377	- - - - - - - - -	13736	22,818,278 – 22,818,377	-	5	102	95.20	-1.27	0.95	0.870103
8548	3R_DroMel_CAF1	22,819,051 – 22,819,168	- - - - - - - - -	13737	22,819,051 – 22,819,168	-	5	117	96.07	-1.84	0.89	0.983126
8549	3R_DroMel_CAF1	22,819,311 – 22,819,470	- - - - - - - - -	13738	22,819,311 – 22,819,408	+	6	120	80.08	-1.35	0.65	0.535948
8549	3R_DroMel_CAF1	22,819,311 – 22,819,470	- - - - - - - - -	13739	22,819,379 – 22,819,470	-	5	120	78.14	-2.56	0.48	0.980605
8550	3R_DroMel_CAF1	22,820,044 – 22,820,153	- - - - - - - - -	13740	22,820,044 – 22,820,153	+	5	114	89.69	-1.68	0.86	0.916075
8550	3R_DroMel_CAF1	22,820,044 – 22,820,153	- - - - - - - - -	13741	22,820,044 – 22,820,153	-	5	114	89.69	-1.68	0.79	0.780821
8551	3R_DroMel_CAF1	22,820,732 – 22,820,837	- - - - - - - - -	13742	22,820,732 – 22,820,837	+	6	118	79.87	-1.78	0.68	0.834433
8551	3R_DroMel_CAF1	22,820,732 – 22,820,837	- - - - - - - - -	13743	22,820,732 – 22,820,837	-	6	118	79.87	-1.45	0.80	0.797084
8552	3R_DroMel_CAF1	22,823,793 – 22,823,911	- - - - - - - - -	13744	22,823,793 – 22,823,911	+	3	119	75.22	-2.35	0.59	0.986070
8553	3R_DroMel_CAF1	22,848,125 – 22,848,244	- - - "knownCDS=Parent=FBtr0085150;Name=CG6277-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6277-RA" - - - - -	13745	22,848,125 – 22,848,244	+	6	120	77.88	-1.41	0.63	0.626293
8554	3R_DroMel_CAF1	22,855,541 – 22,855,658	- - - "knownCDS=Parent=FBtr0085100;Name=NepYr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5811-RA" - - - - -	13746	22,855,541 – 22,855,658	-	6	119	81.74	-1.47	0.72	0.619258
8555	3R_DroMel_CAF1	22,857,337 – 22,857,455	- - - - - - - - -	13747	22,857,337 – 22,857,455	+	5	118	90.46	-1.41	0.85	0.700720
8556	3R_DroMel_CAF1	22,857,622 – 22,857,716	- - - - - - - - -	13748	22,857,622 – 22,857,716	+	6	105	76.78	-1.90	0.64	0.938925
8556	3R_DroMel_CAF1	22,857,622 – 22,857,716	- - - - - - - - -	13749	22,857,622 – 22,857,716	-	6	105	76.78	-1.78	0.55	0.736105
8557	3R_DroMel_CAF1	22,858,379 – 22,858,476	- - - - - - - - -	13750	22,858,379 – 22,858,476	-	5	97	86.33	-4.12	0.73	0.997301
8558	3R_DroMel_CAF1	22,863,337 – 22,863,436	- - - - - - - - -	13751	22,863,337 – 22,863,436	+	6	105	74.76	-2.31	0.62	0.987436
8559	3R_DroMel_CAF1	22,873,799 – 22,873,895	- - - - - - - - -	13752	22,873,799 – 22,873,895	+	4	96	91.67	-1.49	0.79	0.500000
8559	3R_DroMel_CAF1	22,873,799 – 22,873,895	- - - - - - - - -	13753	22,873,799 – 22,873,895	-	4	96	91.67	-1.47	0.84	0.582809
8560	3R_DroMel_CAF1	22,875,638 – 22,875,789	- - - "knownCDS=Parent=FBtr0085101;Name=GCR(ich)-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5812-RA" - - - - -	13754	22,875,638 – 22,875,749	-	3	111	80.18	-1.38	0.84	0.754633
				13755	22,875,678 – 22,875,789	+	5	111	84.95	-1.91	0.79	0.845891
				13756	22,875,678 – 22,875,789	-	5	111	84.95	-1.90	0.80	0.855754
8561	3R_DroMel_CAF1	22,877,082 – 22,877,172	- - - - - - - - -	13757	22,877,082 – 22,877,172	+	5	119	67.29	-1.95	0.31	0.698748
8562	3R_DroMel_CAF1	22,878,061 – 22,878,175	- - - - - - - - -	13758	22,878,061 – 22,878,175	+	3	120	76.49	-1.67	0.60	0.571365
8563	3R_DroMel_CAF1	22,879,207 – 22,879,310	- - - - - - - - -	13759	22,879,207 – 22,879,310	+	4	116	78.16	-1.48	0.70	0.500000
8564	3R_DroMel_CAF1	22,881,255 – 22,881,373	- - - - - - - - -	13760	22,881,255 – 22,881,373	+	4	118	95.62	-2.15	0.86	0.833271
8565	3R_DroMel_CAF1	22,881,727 – 22,881,912	- - - - - - - - -	13761	22,881,727 – 22,881,838	+	4	120	88.87	-2.50	0.76	0.926515
				13762	22,881,727 – 22,881,838	-	4	120	88.87	-2.45	0.74	0.901996
				13763	22,881,798 – 22,881,912	+	4	120	84.44	-1.43	0.80	0.524381
8566	3R_DroMel_CAF1	22,882,768 – 22,882,877	- - - - - - - - -	13764	22,882,768 – 22,882,877	+	6	119	75.00	-1.99	0.71	0.981769
8567	3R_DroMel_CAF1	22,892,082 – 22,892,178	- - - "knownCDS=Parent=FBtr0085143, FBtr0085144;Name=spz-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6134-RG, FlyBase+Annotation+IDs:CG6134-RH" - - - - -	13765	22,892,082 – 22,892,178	+	5	96	77.08	-1.58	0.73	0.836834
8568	3R_DroMel_CAF1	22,892,755 – 22,892,846	- - - - - - - - -	13766	22,892,755 – 22,892,846	-	3	116	67.34	-1.60	0.65	0.992385
8569	3R_DroMel_CAF1	22,893,713 – 22,893,814	- - - - - - - - -	13767	22,893,713 – 22,893,814	+	4	112	74.88	-2.06	0.62	0.954734
8570	3R_DroMel_CAF1	22,894,053 – 22,894,147	- - - - - - - - -	13768	22,894,053 – 22,894,147	+	6	119	80.13	-1.68	0.69	0.786709
8571	3R_DroMel_CAF1	22,895,839 – 22,895,974	- - - - - - - - -	13769	22,895,839 – 22,895,943	+	4	105	84.14	-1.57	0.66	0.526805
8571	3R_DroMel_CAF1	22,895,839 – 22,895,974	- - - - - - - - -	13770	22,895,875 – 22,895,974	+	3	100	68.29	-2.80	0.73	0.999999
8572	3R_DroMel_CAF1	22,896,859 – 22,896,960	- - - - - - - - -	13771	22,896,859 – 22,896,960	+	6	107	73.01	-2.68	0.47	0.994891
8573	3R_DroMel_CAF1	22,902,860 – 22,902,956	- - - - - - - - -	13772	22,902,860 – 22,902,956	+	6	103	77.19	-2.39	0.56	0.965417
8573	3R_DroMel_CAF1	22,902,860 – 22,902,956	- - - - - - - - -	13773	22,902,860 – 22,902,956	-	6	103	77.19	-2.26	0.52	0.915151
8574	3R_DroMel_CAF1	22,906,994 – 22,907,087	- - - - - - - - -	13774	22,906,994 – 22,907,087	+	6	105	78.75	-1.81	0.56	0.639135
8575	3R_DroMel_CAF1	22,915,712 – 22,915,808	- - - "knownCDS=Parent=FBtr0085135;Name=CG15884-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15884-RA" - - - - -	13775	22,915,712 – 22,915,808	+	6	105	80.00	-1.88	0.59	0.697099
8576	3R_DroMel_CAF1	22,930,854 – 22,930,959	- - - - - - - - -	13776	22,930,854 – 22,930,959	-	4	110	91.63	-1.54	0.80	0.566819
8577	3R_DroMel_CAF1	22,940,929 – 22,941,034	- - - "knownCDS=Parent=FBtr0085131;Name=CG6066-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6066-RA" - - - - -	13777	22,940,929 – 22,941,034	-	4	120	79.07	-1.91	0.66	0.833083
8578	3R_DroMel_CAF1	22,941,434 – 22,941,554	- - - "knownCDS=Parent=FBtr0085131;Name=CG6066-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6066-RA" - - - - -	13778	22,941,434 – 22,941,554	+	4	120	94.44	-1.59	0.85	0.565346
8578	3R_DroMel_CAF1	22,941,434 – 22,941,554		13779	22,941,434 – 22,941,554	-	4	120	94.44	-1.43	0.91	0.563271
8579	3R_DroMel_CAF1	22,942,395 – 22,942,511	- - - - - - - - -	13780	22,942,395 – 22,942,511	+	4	120	88.05	-1.70	0.67	0.529937
8579	3R_DroMel_CAF1	22,942,395 – 22,942,511	- - - - - - - - -	13781	22,942,395 – 22,942,511	-	4	120	88.05	-1.61	0.69	0.551624
8580	3R_DroMel_CAF1	22,942,921 – 22,943,117	- - - "knownCDS=Parent=FBtr0085108;Name=CG5880-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5880-RA" - - - - -	13782	22,942,921 – 22,943,037	+	6	119	74.56	-2.23	0.68	0.988809
				13783	22,942,921 – 22,943,037	-	6	119	74.56	-1.86	0.45	0.612865
				13784	22,942,957 – 22,943,077	+	6	120	74.94	-2.79	0.53	0.994888
				13785	22,942,997 – 22,943,117	+	6	120	74.89	-1.83	0.48	0.670681
8581	3R_DroMel_CAF1	22,946,795 – 22,946,915	- - - "knownCDS=Parent=FBtr0085109;Name=CG5882-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5882-RA" - - - - -	13786	22,946,795 – 22,946,915	-	6	120	79.67	-1.45	0.73	0.777843
8582	3R_DroMel_CAF1	22,953,204 – 22,953,296	- - - "knownCDS=Parent=FBtr0085129;Name=CG6051-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6051-RA" - - - - -	13787	22,953,204 – 22,953,296	-	6	92	80.70	-1.88	0.58	0.611640
8583	3R_DroMel_CAF1	22,956,065 – 22,956,160	- - - - - - - - -	13788	22,956,065 – 22,956,160	-	6	102	80.31	-1.53	0.61	0.507423
8584	3R_DroMel_CAF1	22,959,053 – 22,959,145	- - - - - - - - -	13789	22,959,053 – 22,959,145	-	5	96	72.38	-2.50	0.49	0.996785
8585	3R_DroMel_CAF1	22,960,439 – 22,960,543	- - - - - - - - -	13790	22,960,439 – 22,960,543	-	5	120	79.69	-2.06	0.44	0.611582
8586	3R_DroMel_CAF1	22,960,993 – 22,961,089	- - - - - - - - -	13791	22,960,993 – 22,961,089	+	6	100	81.99	-1.45	0.66	0.500000
8587	3R_DroMel_CAF1	22,963,357 – 22,963,469	- - - - - - - - -	13792	22,963,357 – 22,963,469	+	3	119	83.14	-1.50	0.79	0.519584
8588	3R_DroMel_CAF1	22,979,939 – 22,980,035	- - - "knownCDS=Parent=FBtr0085110;Name=Mdh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5889-RA" - - - - -	13793	22,979,939 – 22,980,035	-	5	120	85.75	-1.82	0.74	0.721711
8589	3R_DroMel_CAF1	22,980,307 – 22,980,627	- - - "knownCDS=Parent=FBtr0085110;Name=Mdh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5889-RA" - - - - -	13794	22,980,307 – 22,980,427	+	5	120	94.67	-1.27	0.89	0.725336
				13795	22,980,347 – 22,980,467	+	5	120	94.75	-1.25	0.90	0.721879
				13796	22,980,467 – 22,980,587	+	5	120	97.67	-1.41	0.92	0.816955
				13797	22,980,467 – 22,980,587	-	5	120	97.67	-1.23	0.92	0.596608
				13798	22,980,507 – 22,980,627	+	5	120	98.17	-2.16	0.98	0.998882
				13799	22,980,507 – 22,980,627	-	5	120	98.17	-2.02	0.95	0.995983
8590	3R_DroMel_CAF1	22,980,907 – 22,981,067	- - - "knownCDS=Parent=FBtr0085110;Name=Mdh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5889-RA" - - - - -	13800	22,980,907 – 22,981,027	+	4	120	94.17	-1.46	0.89	0.557011
8590	3R_DroMel_CAF1	22,980,907 – 22,981,067		13801	22,980,947 – 22,981,067	+	4	120	95.00	-2.54	0.91	0.973869
8591	3R_DroMel_CAF1	22,981,240 – 22,981,358	- - - - - - - - -	13802	22,981,240 – 22,981,358	+	4	120	87.52	-1.41	0.82	0.548761
8591	3R_DroMel_CAF1	22,981,240 – 22,981,358	- - - - - - - - -	13803	22,981,240 – 22,981,358	-	4	120	87.52	-1.33	0.86	0.500000
8592	3R_DroMel_CAF1	22,981,512 – 22,981,672	- - - "knownCDS=Parent=FBtr0085110;Name=Mdh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5889-RA" - - - - -	13804	22,981,512 – 22,981,632	+	4	120	95.28	-1.33	0.96	0.500000
8592	3R_DroMel_CAF1	22,981,512 – 22,981,672		13805	22,981,552 – 22,981,672	+	4	120	95.14	-1.64	0.88	0.652041
8593	3R_DroMel_CAF1	22,982,019 – 22,982,131	- - - "knownCDS=Parent=FBtr0085110;Name=Mdh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5889-RA" - - - - -	13806	22,982,019 – 22,982,131	+	4	112	97.91	-2.07	0.93	0.812551
8594	3R_DroMel_CAF1	22,982,171 – 22,982,291	- - - - - - - - -	13807	22,982,171 – 22,982,291	-	4	120	94.31	-1.92	0.87	0.832934
8595	3R_DroMel_CAF1	22,987,294 – 22,987,396	- - - - - - - - -	13808	22,987,294 – 22,987,396	-	5	119	68.36	-1.27	0.66	0.787134
8596	3R_DroMel_CAF1	22,990,197 – 22,990,314	- - - "knownCDS=Parent=FBtr0085115;Name=CG31065-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31065-RA" - - - - -	13809	22,990,197 – 22,990,314	-	4	120	85.07	-1.56	0.86	0.697239
8597	3R_DroMel_CAF1	22,994,433 – 22,994,545	- - - - - - - - -	13810	22,994,433 – 22,994,545	-	4	120	77.54	-2.37	0.57	0.951502
8598	3R_DroMel_CAF1	22,994,648 – 22,994,981	- - - - - - - - -	13811	22,994,648 – 22,994,765	+	4	120	82.28	-2.32	0.63	0.899798
				13812	22,994,688 – 22,994,800	+	4	120	78.25	-3.74	0.59	0.999620
				13813	22,994,688 – 22,994,800	-	4	120	78.25	-3.09	0.50	0.976312
				13814	22,994,800 – 22,994,912	+	4	120	88.94	-1.50	0.75	0.565031
				13815	22,994,840 – 22,994,952	+	4	120	89.37	-1.82	0.86	0.866961
				13816	22,994,840 – 22,994,952	-	4	120	89.37	-2.32	0.82	0.948885
				13817	22,994,872 – 22,994,981	+	4	120	87.34	-2.14	0.81	0.924023
				13818	22,994,872 – 22,994,981	-	4	120	87.34	-2.08	0.81	0.909359
8599	3R_DroMel_CAF1	22,995,014 – 22,995,133	- - - - - - - - -	13819	22,995,014 – 22,995,133	-	4	120	75.59	-2.23	0.50	0.766173
8600	3R_DroMel_CAF1	22,995,570 – 22,995,881	- - - - - - - - -	13820	22,995,570 – 22,995,671	+	3	101	93.40	-1.97	0.85	0.573689
				13821	22,995,570 – 22,995,671	-	3	101	93.40	-2.36	0.88	0.845590
				13822	22,995,610 – 22,995,711	+	3	101	94.06	-4.16	0.84	0.922546
				13823	22,995,610 – 22,995,711	-	3	101	94.06	-4.16	0.84	0.924281
				13824	22,995,631 – 22,995,751	+	4	120	98.33	-3.23	0.96	0.958515
				13825	22,995,631 – 22,995,751	-	4	120	98.33	-2.16	0.95	0.845930
				13826	22,995,671 – 22,995,791	+	4	120	96.25	-1.63	0.90	0.609609
				13827	22,995,671 – 22,995,791	-	4	120	96.25	-1.79	0.94	0.822961
				13828	22,995,791 – 22,995,881	-	3	90	98.51	-2.10	0.94	0.848129
8601	3R_DroMel_CAF1	22,995,921 – 22,996,012	- - - - - - - - -	13829	22,995,921 – 22,996,012	+	3	120	83.61	-1.48	0.80	0.510715
8602	3R_DroMel_CAF1	22,996,423 – 22,996,525	- - - - - - - - -	13830	22,996,423 – 22,996,525	+	6	112	79.62	-1.64	0.58	0.516251
8602	3R_DroMel_CAF1	22,996,423 – 22,996,525	- - - - - - - - -	13831	22,996,423 – 22,996,525	-	6	112	79.62	-2.75	0.79	0.965508
8603	3R_DroMel_CAF1	22,997,390 – 22,997,506	- - - - - - - - -	13832	22,997,390 – 22,997,481	-	6	102	74.36	-2.82	0.48	0.995142
8603	3R_DroMel_CAF1	22,997,390 – 22,997,506	- - - - - - - - -	13833	22,997,409 – 22,997,506	-	6	105	78.18	-2.79	0.49	0.965541
8604	3R_DroMel_CAF1	22,998,410 – 22,998,526	- - "RNAmicro=f:22998410_t:22998525_strand:+_p:0.999773" - - - - - -	13834	22,998,410 – 22,998,526	+	4	116	88.79	-4.30	0.88	0.995418
8604	3R_DroMel_CAF1	22,998,410 – 22,998,526		13835	22,998,410 – 22,998,526	-	4	116	88.79	-4.05	0.81	0.988506
8605	3R_DroMel_CAF1	22,999,243 – 22,999,363	- - - "knownCDS=Parent=FBtr0085128;Name=Ser-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6127-RA" - - - - -	13836	22,999,243 – 22,999,363	-	6	120	78.17	-2.03	0.56	0.842014
8606	3R_DroMel_CAF1	23,002,449 – 23,002,548	- - - - - - - - -	13837	23,002,449 – 23,002,548	+	5	105	84.62	-2.07	0.67	0.745380
8607	3R_DroMel_CAF1	23,002,575 – 23,002,695	- - - "knownCDS=Parent=FBtr0085128;Name=Ser-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6127-RA" - - - - -	13838	23,002,575 – 23,002,695	+	6	120	85.28	-2.19	0.85	0.881639
8608	3R_DroMel_CAF1	23,003,062 – 23,003,165	- - - "knownCDS=Parent=FBtr0085128;Name=Ser-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6127-RA" - - - - -	13839	23,003,062 – 23,003,165	+	6	112	75.62	-2.86	0.52	0.994087
8609	3R_DroMel_CAF1	23,005,598 – 23,005,704	- - - - - - - - -	13840	23,005,598 – 23,005,704	+	4	110	86.57	-1.58	0.73	0.620092
8610	3R_DroMel_CAF1	23,005,965 – 23,006,069	- - - - - - - - -	13841	23,005,965 – 23,006,069	+	4	104	94.55	-1.72	0.88	0.749233
8611	3R_DroMel_CAF1	23,010,131 – 23,010,223	- - - - - - - - -	13842	23,010,131 – 23,010,223	-	5	92	87.80	-2.50	0.71	0.898468
8612	3R_DroMel_CAF1	23,010,287 – 23,010,385	- - - - - - - - -	13843	23,010,287 – 23,010,385	-	6	102	77.38	-1.28	0.64	0.594177
8613	3R_DroMel_CAF1	23,014,049 – 23,014,153	- - - "knownCDS=Parent=FBtr0085128;Name=Ser-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6127-RA" - - - - -	13844	23,014,049 – 23,014,153	+	6	115	78.68	-1.81	0.64	0.857710
8614	3R_DroMel_CAF1	23,017,237 – 23,017,350	- - - "knownCDS=Parent=FBtr0085128;Name=Ser-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6127-RA" - - - - -	13845	23,017,237 – 23,017,350	+	6	114	76.29	-2.90	0.55	0.993680
8615	3R_DroMel_CAF1	23,017,900 – 23,017,990	- - - - - - - - -	13846	23,017,900 – 23,017,990	+	4	100	82.53	-3.30	0.66	0.994639
8615	3R_DroMel_CAF1	23,017,900 – 23,017,990	- - - - - - - - -	13847	23,017,900 – 23,017,990	-	4	100	82.53	-3.35	0.60	0.985303
8616	3R_DroMel_CAF1	23,023,100 – 23,023,217	- - - - - - - - -	13848	23,023,100 – 23,023,217	-	6	120	79.91	-1.10	0.70	0.507246
8617	3R_DroMel_CAF1	23,025,385 – 23,025,475	- - - - - - - - -	13849	23,025,385 – 23,025,475	-	6	99	79.99	-1.93	0.54	0.556049
8618	3R_DroMel_CAF1	23,026,966 – 23,027,062	- - - - - - - - -	13850	23,026,966 – 23,027,062	+	6	120	79.13	-1.74	0.67	0.850385
8618	3R_DroMel_CAF1	23,026,966 – 23,027,062	- - - - - - - - -	13851	23,026,966 – 23,027,062	-	6	120	79.13	-1.79	0.70	0.882584
8619	3R_DroMel_CAF1	23,036,161 – 23,036,257	- - - - - - - - -	13852	23,036,161 – 23,036,257	-	4	117	75.86	-2.27	0.52	0.874467
8620	3R_DroMel_CAF1	23,037,416 – 23,037,507	- - - - - - - - -	13853	23,037,416 – 23,037,507	-	6	92	92.29	-2.41	0.91	0.997167
8621	3R_DroMel_CAF1	23,044,042 – 23,044,154	- - - - - - - - -	13854	23,044,042 – 23,044,154	-	5	113	86.83	-1.67	0.84	0.804012
8622	3R_DroMel_CAF1	23,044,950 – 23,045,041	- - - "knownCDS=Parent=FBtr0100061;Name=CG34006-cds, ;Dbxref=FlyBase+Annotation+IDs:CG34006-RA" - - - - -	13855	23,044,950 – 23,045,041	+	6	113	80.42	-1.42	0.66	0.590173
8623	3R_DroMel_CAF1	23,046,562 – 23,046,657	- - - - - - - - -	13856	23,046,562 – 23,046,657	-	6	99	83.10	-1.94	0.66	0.559712
8624	3R_DroMel_CAF1	23,051,557 – 23,051,707	- - - - - - - - -	13857	23,051,557 – 23,051,670	-	3	119	78.31	-2.30	0.61	0.932745
8624	3R_DroMel_CAF1	23,051,557 – 23,051,707	- - - - - - - - -	13858	23,051,597 – 23,051,707	+	6	116	74.42	-2.18	0.35	0.665335
8625	3R_DroMel_CAF1	23,054,979 – 23,055,083	- - - "knownCDS=Parent=FBtr0085127;Name=CG31063-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31063-RA" - - - - -	13859	23,054,979 – 23,055,083	-	6	104	83.85	-2.56	0.75	0.802814
8626	3R_DroMel_CAF1	23,060,262 – 23,060,367	- - - "knownCDS=Parent=FBtr0085118;Name=CG31068-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31068-RA" - - - - -	13860	23,060,262 – 23,060,367	-	6	105	72.57	-1.95	0.45	0.837736
8627	3R_DroMel_CAF1	23,064,508 – 23,064,607	- - - "knownCDS=Parent=FBtr0085124, FBtr0085125;Name=CG31064-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31064-RA, FlyBase+Annotation+IDs:CG31064-RB" - - - - -	13861	23,064,508 – 23,064,607	+	6	108	68.99	-1.53	0.46	0.512192
8628	3R_DroMel_CAF1	23,068,733 – 23,068,823	- - - "knownCDS=Parent=FBtr0085122, FBtr0085123;Name=CG18766-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18766-RB, FlyBase+Annotation+IDs:CG18766-RA" - - - - -	13862	23,068,733 – 23,068,823	-	6	90	79.81	-1.33	0.73	0.701955
8629	3R_DroMel_CAF1	23,069,730 – 23,069,820	- - - - - - - - -	13863	23,069,730 – 23,069,820	-	4	97	80.57	-2.07	0.71	0.925127
8630	3R_DroMel_CAF1	23,071,266 – 23,071,360	- - - - - - - - -	13864	23,071,266 – 23,071,360	+	6	101	82.27	-1.56	0.73	0.625951
8631	3R_DroMel_CAF1	23,079,426 – 23,079,528	- - - - - - - - -	13865	23,079,426 – 23,079,528	+	6	113	72.66	-2.78	0.36	0.990781
8632	3R_DroMel_CAF1	23,080,790 – 23,080,896	- - - "knownCDS=Parent=FBtr0085155, FBtr0085156;Name=TfIIA-L-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5930-RA, FlyBase+Annotation+IDs:CG5930-RB" - - - - -	13866	23,080,790 – 23,080,896	+	6	108	72.30	-1.89	0.58	0.954341
8633	3R_DroMel_CAF1	23,090,468 – 23,090,583	- - - "knownCDS=Parent=FBtr0085177;Name=CG14262-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14262-RA" - - - - -	13867	23,090,468 – 23,090,583	+	6	117	80.63	-1.99	0.73	0.877294
8634	3R_DroMel_CAF1	23,094,620 – 23,094,740	- - "RNAmicro=f:23094620_t:23094739_strand:+_p:0.884611" "knownCDS=Parent=FBtr0085176;Name=l(3)mbt-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5954-RA" - - - - -	13868	23,094,620 – 23,094,740	+	6	120	79.39	-2.47	0.57	0.921653
8635	3R_DroMel_CAF1	23,097,444 – 23,097,548	- - - - - - - - -	13869	23,097,444 – 23,097,548	+	6	120	69.13	-0.94	0.65	0.515932
8636	3R_DroMel_CAF1	23,098,717 – 23,098,818	- - - - - - - - -	13870	23,098,717 – 23,098,818	-	5	104	87.63	-1.72	0.83	0.841916
8637	3R_DroMel_CAF1	23,099,512 – 23,099,619	- - - "knownCDS=Parent=FBtr0085158;Name=CG5934-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5934-RA" - - - - -	13871	23,099,512 – 23,099,619	-	6	112	87.98	-1.71	0.84	0.595543
8638	3R_DroMel_CAF1	23,100,823 – 23,100,920	- - - - - - - - -	13872	23,100,823 – 23,100,920	-	6	100	75.88	-1.85	0.53	0.787573
8639	3R_DroMel_CAF1	23,106,104 – 23,106,289	- - - - - - - - -	13873	23,106,104 – 23,106,217	-	5	118	89.80	-2.47	0.90	0.999227
				13874	23,106,140 – 23,106,252	-	5	118	88.81	-1.76	0.85	0.922250
				13875	23,106,179 – 23,106,289	-	5	117	91.38	-1.46	0.78	0.521430
8640	3R_DroMel_CAF1	23,106,861 – 23,106,968	- - - - - - - - -	13876	23,106,861 – 23,106,968	+	6	115	68.84	-1.81	0.33	0.514483
8641	3R_DroMel_CAF1	23,107,510 – 23,107,611	- - - - - - - - -	13877	23,107,510 – 23,107,611	-	6	120	75.36	-1.60	0.60	0.811364
8642	3R_DroMel_CAF1	23,109,962 – 23,110,122	- - - "knownCDS=Parent=FBtr0085163;Name=CG3368-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3368-RA" - - - - -	13878	23,109,962 – 23,110,082	+	5	120	87.42	-1.84	0.84	0.907011
				13879	23,109,962 – 23,110,082	-	5	120	87.42	-1.90	0.79	0.871390
				13880	23,110,002 – 23,110,122	-	5	120	87.08	-2.12	0.73	0.832779
8643	3R_DroMel_CAF1	23,112,644 – 23,112,804	- - - "knownCDS=Parent=FBtr0085163;Name=CG3368-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3368-RA" - - - - -	13881	23,112,644 – 23,112,764	+	5	120	89.50	-1.81	0.85	0.939929
				13882	23,112,644 – 23,112,764	-	5	120	89.50	-1.76	0.80	0.853578
				13883	23,112,684 – 23,112,804	+	5	120	89.58	-1.31	0.84	0.537171
8644	3R_DroMel_CAF1	23,114,193 – 23,114,292	- - - - - - - - -	13884	23,114,193 – 23,114,292	+	6	103	79.87	-1.86	0.59	0.706615
8645	3R_DroMel_CAF1	23,114,619 – 23,114,767	- - - "knownCDS=Parent=FBtr0085164;Name=Hmu-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3373-RA" - - - - -	13885	23,114,619 – 23,114,727	+	6	119	72.14	-1.07	0.75	0.901335
8645	3R_DroMel_CAF1	23,114,619 – 23,114,767		13886	23,114,647 – 23,114,767	+	6	120	76.89	-1.50	0.71	0.890979
8646	3R_DroMel_CAF1	23,121,279 – 23,121,399	- - - "knownCDS=Parent=FBtr0085171;Name=CG3339-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3339-RA" - - - - -	13887	23,121,279 – 23,121,399	+	6	120	87.72	-1.53	0.87	0.639810
8647	3R_DroMel_CAF1	23,125,841 – 23,125,961	- - - - - - - - -	13888	23,125,841 – 23,125,961	+	5	120	93.29	-1.77	0.76	0.591565
8648	3R_DroMel_CAF1	23,128,234 – 23,128,347	- - - "knownCDS=Parent=FBtr0085171;Name=CG3339-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3339-RA" - - - - -	13889	23,128,234 – 23,128,347	+	6	120	74.83	-1.87	0.60	0.936242
8649	3R_DroMel_CAF1	23,136,121 – 23,136,229	- - - - - - - - -	13890	23,136,121 – 23,136,229	+	6	108	79.76	-2.30	0.65	0.924727
8649	3R_DroMel_CAF1	23,136,121 – 23,136,229	- - - - - - - - -	13891	23,136,121 – 23,136,229	-	6	108	79.76	-1.84	0.56	0.576935
8650	3R_DroMel_CAF1	23,141,673 – 23,141,799	- - - - - - - - -	13892	23,141,673 – 23,141,775	+	4	119	63.06	-2.19	0.46	0.962860
8650	3R_DroMel_CAF1	23,141,673 – 23,141,799	- - - - - - - - -	13893	23,141,709 – 23,141,799	+	4	104	72.05	-2.94	0.70	0.999952
8651	3R_DroMel_CAF1	23,142,697 – 23,142,789	- - - - - - - - -	13894	23,142,697 – 23,142,789	+	6	119	71.61	-1.39	0.58	0.679108
8652	3R_DroMel_CAF1	23,144,154 – 23,144,269	- - - "knownCDS=Parent=FBtr0085171;Name=CG3339-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3339-RA" - - - - -	13895	23,144,154 – 23,144,269	-	6	115	78.72	-0.97	0.74	0.532026
8653	3R_DroMel_CAF1	23,144,345 – 23,144,455	- - - "knownCDS=Parent=FBtr0085171;Name=CG3339-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3339-RA" - - - - -	13896	23,144,345 – 23,144,455	+	6	110	81.88	-1.64	0.63	0.520160
8653	3R_DroMel_CAF1	23,144,345 – 23,144,455		13897	23,144,345 – 23,144,455	-	6	110	81.88	-1.84	0.65	0.645978
8654	3R_DroMel_CAF1	23,146,716 – 23,146,829	- - - "knownCDS=texon11664;Parent=CG_NCBI_GNO_32639458, CG_RGUI_GID_mRNA_40009664, CG_DGIL_SNO_28367751, CG_BATZ_CON_47011281" - - - - -	13898	23,146,716 – 23,146,829	+	6	120	91.82	-2.62	0.81	0.835287
8655	3R_DroMel_CAF1	23,147,817 – 23,147,937	- - - - - - - - -	13899	23,147,817 – 23,147,937	+	6	120	74.78	-0.94	0.72	0.663466
8656	3R_DroMel_CAF1	23,148,894 – 23,149,019	- - - - - - - - -	13900	23,148,894 – 23,149,003	-	3	111	83.03	-2.45	0.70	0.902129
8656	3R_DroMel_CAF1	23,148,894 – 23,149,019	- - - - - - - - -	13901	23,148,924 – 23,149,019	-	3	96	75.09	-2.86	0.63	0.999606
8657	3R_DroMel_CAF1	23,149,395 – 23,149,575	- - - - - - - - -	13902	23,149,395 – 23,149,498	-	6	120	72.49	-1.43	0.62	0.815884
8657	3R_DroMel_CAF1	23,149,395 – 23,149,575	- - - - - - - - -	13903	23,149,458 – 23,149,575	+	4	117	89.03	-1.84	0.77	0.774099
8658	3R_DroMel_CAF1	23,150,190 – 23,150,310	- - - - - - - - -	13904	23,150,190 – 23,150,310	-	4	120	97.50	-1.62	0.91	0.500000
8659	3R_DroMel_CAF1	23,151,073 – 23,151,193	- - - - - - - - -	13905	23,151,073 – 23,151,193	+	4	120	86.11	-3.06	0.80	0.992098
8659	3R_DroMel_CAF1	23,151,073 – 23,151,193	- - - - - - - - -	13906	23,151,073 – 23,151,193	-	4	120	86.11	-1.90	0.82	0.863799
8660	3R_DroMel_CAF1	23,151,461 – 23,151,581	- - - - - - - - -	13907	23,151,461 – 23,151,581	-	4	120	97.50	-1.62	0.97	0.639071
8661	3R_DroMel_CAF1	23,152,488 – 23,152,604	- - - - - - - - -	13908	23,152,488 – 23,152,604	-	4	120	94.07	-1.60	0.84	0.571600
8662	3R_DroMel_CAF1	23,153,324 – 23,153,483	- - - - - - - - -	13909	23,153,324 – 23,153,444	+	4	120	92.92	-1.76	0.87	0.818925
8662	3R_DroMel_CAF1	23,153,324 – 23,153,483	- - - - - - - - -	13910	23,153,364 – 23,153,483	+	4	120	92.89	-1.98	0.81	0.786856
8663	3R_DroMel_CAF1	23,153,784 – 23,153,904	- - - - - - - - -	13911	23,153,784 – 23,153,904	+	4	120	92.47	-2.06	0.94	0.972104
8664	3R_DroMel_CAF1	23,153,983 – 23,154,143	- - - - - - - - -	13912	23,153,983 – 23,154,103	+	4	120	98.47	-2.50	0.91	0.857484
				13913	23,154,023 – 23,154,143	+	4	120	97.22	-1.62	0.96	0.635662
				13914	23,154,023 – 23,154,143	-	4	120	97.22	-1.49	0.97	0.535068
8665	3R_DroMel_CAF1	23,154,532 – 23,154,652	- - - - - - - - -	13915	23,154,532 – 23,154,652	+	4	120	97.92	-2.28	0.93	0.878258
8666	3R_DroMel_CAF1	23,155,558 – 23,155,678	- - - "knownCDS=Parent=FBtr0085170;Name=CG3330-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3330-RA" - - - - -	13916	23,155,558 – 23,155,678	+	4	120	92.36	-1.65	0.85	0.718463
8666	3R_DroMel_CAF1	23,155,558 – 23,155,678		13917	23,155,558 – 23,155,678	-	4	120	92.36	-1.59	0.82	0.606923
8667	3R_DroMel_CAF1	23,156,091 – 23,156,208	- - - "knownCDS=Parent=FBtr0085170;Name=CG3330-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3330-RA" - - - - -	13918	23,156,091 – 23,156,208	+	4	120	94.51	-1.75	0.80	0.512139
8668	3R_DroMel_CAF1	23,156,833 – 23,156,970	- - - - - - - - -	13919	23,156,833 – 23,156,935	+	4	120	90.34	-1.92	0.81	0.832293
				13920	23,156,833 – 23,156,935	-	4	120	90.34	-1.33	0.86	0.500000
				13921	23,156,873 – 23,156,970	+	4	120	85.99	-1.89	0.75	0.805518
8669	3R_DroMel_CAF1	23,157,319 – 23,157,439	- - - - - - - - -	13922	23,157,319 – 23,157,439	+	4	120	96.11	-1.89	0.91	0.815692
8670	3R_DroMel_CAF1	23,157,674 – 23,157,834	- - - - - - - - -	13923	23,157,674 – 23,157,794	-	4	120	91.32	-2.07	0.91	0.963005
8670	3R_DroMel_CAF1	23,157,674 – 23,157,834	- - - - - - - - -	13924	23,157,714 – 23,157,834	+	4	120	99.17	-1.75	1.01	0.599643
8671	3R_DroMel_CAF1	23,158,728 – 23,158,848	- - - - - - - - -	13925	23,158,728 – 23,158,848	-	3	120	98.89	-1.72	0.99	0.773034
8672	3R_DroMel_CAF1	23,159,767 – 23,160,047	- - - - - - - - -	13926	23,159,767 – 23,159,887	+	3	120	93.89	-2.45	0.84	0.784671
				13927	23,159,847 – 23,159,967	+	3	120	96.67	-2.60	0.96	0.968403
				13928	23,159,927 – 23,160,047	+	3	120	97.22	-1.50	0.96	0.540324
				13929	23,159,927 – 23,160,047	-	3	120	97.22	-2.36	0.96	0.941450
8673	3R_DroMel_CAF1	23,160,121 – 23,160,239	- - - - - - - - -	13930	23,160,121 – 23,160,239	-	3	120	96.11	-2.20	0.96	0.927904
8674	3R_DroMel_CAF1	23,160,319 – 23,160,439	- - - - - - - - -	13931	23,160,319 – 23,160,439	+	3	120	96.11	-1.98	0.96	0.852989
8674	3R_DroMel_CAF1	23,160,319 – 23,160,439	- - - - - - - - -	13932	23,160,319 – 23,160,439	-	3	120	96.11	-2.31	0.97	0.952149
8675	3R_DroMel_CAF1	23,177,884 – 23,177,979	- - - - - - - - -	13933	23,177,884 – 23,177,979	-	6	109	76.57	-2.32	0.55	0.962461
8676	3R_DroMel_CAF1	23,180,992 – 23,181,113	- - - - - - - - -	13934	23,180,992 – 23,181,087	+	6	96	85.44	-2.16	0.73	0.500000
				13935	23,180,992 – 23,181,087	-	6	96	85.44	-2.03	0.77	0.579203
				13936	23,181,021 – 23,181,113	+	6	106	83.42	-1.88	0.70	0.584062
8677	3R_DroMel_CAF1	23,183,280 – 23,183,386	- - - - - - - - -	13937	23,183,280 – 23,183,386	+	5	114	90.66	-1.76	0.79	0.816327
8678	3R_DroMel_CAF1	23,183,816 – 23,183,907	- - - - - - - - -	13938	23,183,816 – 23,183,907	+	4	91	86.08	-2.75	0.69	0.943715
8678	3R_DroMel_CAF1	23,183,816 – 23,183,907	- - - - - - - - -	13939	23,183,816 – 23,183,907	-	4	91	86.08	-2.22	0.70	0.862968
8679	3R_DroMel_CAF1	23,184,690 – 23,184,781	- - - - - - - - -	13940	23,184,690 – 23,184,781	+	3	106	85.53	-2.81	0.70	0.889687
8679	3R_DroMel_CAF1	23,184,690 – 23,184,781	- - - - - - - - -	13941	23,184,690 – 23,184,781	-	3	106	85.53	-2.45	0.83	0.914901
8680	3R_DroMel_CAF1	23,185,190 – 23,185,288	- - - - - - - - -	13942	23,185,190 – 23,185,288	+	6	114	67.14	-1.85	0.34	0.652721
8681	3R_DroMel_CAF1	23,185,496 – 23,185,587	- - - - - - - - -	13943	23,185,496 – 23,185,587	+	3	91	93.33	-1.53	0.98	0.725944
8682	3R_DroMel_CAF1	23,186,012 – 23,186,119	- - - "knownCDS=Parent=FBtr0085166;Name=CG6599-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6599-RA" - - - - -	13944	23,186,012 – 23,186,119	-	6	115	71.57	-2.64	0.43	0.994380
8683	3R_DroMel_CAF1	23,188,176 – 23,188,272	- - - "knownCDS=Parent=FBtr0085166;Name=CG6599-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6599-RA" - - - - -	13945	23,188,176 – 23,188,272	+	6	96	80.97	-1.61	0.63	0.567355
8684	3R_DroMel_CAF1	23,188,331 – 23,188,430	- - - "knownCDS=Parent=FBtr0085166;Name=CG6599-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6599-RA" - - - - -	13946	23,188,331 – 23,188,430	+	6	99	81.28	-1.67	0.64	0.617678
8685	3R_DroMel_CAF1	23,188,949 – 23,189,144	- - - "knownCDS=Parent=FBtr0085166;Name=CG6599-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6599-RA" - - - - -	13947	23,188,949 – 23,189,053	+	5	107	89.92	-2.85	0.83	0.998381
				13948	23,188,949 – 23,189,053	-	5	107	89.92	-1.68	0.80	0.803575
				13949	23,189,053 – 23,189,144	-	4	103	86.60	-2.86	0.75	0.974655
8686	3R_DroMel_CAF1	23,193,313 – 23,193,408	- - - - - - - - -	13950	23,193,313 – 23,193,408	-	6	107	80.08	-1.57	0.61	0.555743
8687	3R_DroMel_CAF1	23,194,836 – 23,194,940	- - - "knownCDS=Parent=FBtr0085167;Name=CG13980-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13980-RA" - - - - -	13951	23,194,836 – 23,194,940	+	6	119	76.17	-1.72	0.59	0.835670
8687	3R_DroMel_CAF1	23,194,836 – 23,194,940		13952	23,194,836 – 23,194,940	-	6	119	76.17	-1.63	0.54	0.543232
8688	3R_DroMel_CAF1	23,196,498 – 23,196,588	- - - "knownCDS=Parent=FBtr0085167;Name=CG13980-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13980-RA" - - - - -	13953	23,196,498 – 23,196,588	+	6	108	75.21	-1.67	0.65	0.923915
8689	3R_DroMel_CAF1	23,203,151 – 23,203,247	- - - - - - - - -	13954	23,203,151 – 23,203,247	+	6	108	84.19	-2.10	0.86	0.891864
8689	3R_DroMel_CAF1	23,203,151 – 23,203,247	- - - - - - - - -	13955	23,203,151 – 23,203,247	-	6	108	84.19	-2.03	0.80	0.755689
8690	3R_DroMel_CAF1	23,205,068 – 23,205,182	- - - - - - - - -	13956	23,205,068 – 23,205,182	-	6	114	79.84	-1.46	0.66	0.658864
8691	3R_DroMel_CAF1	23,206,173 – 23,206,273	- - - - - - - - -	13957	23,206,173 – 23,206,273	+	6	114	70.98	-2.98	0.31	0.993692
8691	3R_DroMel_CAF1	23,206,173 – 23,206,273	- - - - - - - - -	13958	23,206,173 – 23,206,273	-	6	114	70.98	-2.37	0.39	0.972929
8692	3R_DroMel_CAF1	23,210,923 – 23,211,017	- - - - - - - - -	13959	23,210,923 – 23,211,017	+	6	98	77.74	-1.99	0.82	0.961593
8692	3R_DroMel_CAF1	23,210,923 – 23,211,017	- - - - - - - - -	13960	23,210,923 – 23,211,017	-	6	98	77.74	-2.01	0.68	0.947997
8693	3R_DroMel_CAF1	23,215,305 – 23,215,415	- - - "knownCDS=Parent=FBtr0085168;Name=side-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31062-RA" - - - - -	13961	23,215,305 – 23,215,415	-	6	110	76.20	-1.96	0.63	0.951460
8694	3R_DroMel_CAF1	23,230,430 – 23,230,529	- - - - - - - - -	13962	23,230,430 – 23,230,529	+	4	99	79.29	-3.49	0.57	0.997843
8695	3R_DroMel_CAF1	23,230,818 – 23,230,908	- - - - - - - - -	13963	23,230,818 – 23,230,908	+	4	94	96.74	-1.97	0.90	0.799789
8696	3R_DroMel_CAF1	23,232,374 – 23,232,469	- - - - - - - - -	13964	23,232,374 – 23,232,469	-	6	110	83.08	-1.46	0.81	0.582050
8697	3R_DroMel_CAF1	23,235,083 – 23,235,181	- - - - - - - - -	13965	23,235,083 – 23,235,181	+	6	105	78.66	-1.26	0.78	0.780594
8698	3R_DroMel_CAF1	23,235,910 – 23,236,002	- - - - - - - - -	13966	23,235,910 – 23,236,002	-	6	93	77.34	-1.49	0.71	0.874698
8699	3R_DroMel_CAF1	23,238,610 – 23,238,706	- - - - - - - - -	13967	23,238,610 – 23,238,706	+	6	117	81.92	-1.69	0.70	0.667273
8700	3R_DroMel_CAF1	23,241,168 – 23,241,265	- - - - - - - - -	13968	23,241,168 – 23,241,265	+	4	97	83.30	-3.18	0.67	0.990271
8701	3R_DroMel_CAF1	23,243,690 – 23,243,822	- - - - - - - - -	13969	23,243,690 – 23,243,791	+	6	106	81.09	-3.40	0.72	0.957516
				13970	23,243,690 – 23,243,791	-	6	106	81.09	-3.07	0.72	0.947874
				13971	23,243,730 – 23,243,822	+	5	101	89.93	-2.91	0.87	0.999659
				13972	23,243,730 – 23,243,822	-	5	101	89.93	-2.02	0.81	0.944343
8702	3R_DroMel_CAF1	23,245,002 – 23,245,104	- - - - - - - - -	13973	23,245,002 – 23,245,104	+	6	102	79.03	-1.52	0.63	0.659307
8703	3R_DroMel_CAF1	23,255,989 – 23,256,114	- - - - - - - - -	13974	23,255,989 – 23,256,081	+	3	95	72.39	-2.24	0.58	0.993314
				13975	23,256,016 – 23,256,114	+	6	102	80.29	-1.61	0.66	0.706392
				13976	23,256,016 – 23,256,114	-	6	102	80.29	-1.33	0.72	0.652018
8704	3R_DroMel_CAF1	23,260,961 – 23,261,052	- - - - - - - - -	13977	23,260,961 – 23,261,052	+	4	92	85.50	-2.73	0.59	0.745186
8705	3R_DroMel_CAF1	23,264,943 – 23,265,044	- - - - - - - - -	13978	23,264,943 – 23,265,044	-	6	113	83.62	-2.85	0.59	0.602528
8706	3R_DroMel_CAF1	23,270,147 – 23,270,251	- - - - - - - - -	13979	23,270,147 – 23,270,251	+	5	104	80.91	-2.92	0.63	0.991628
8707	3R_DroMel_CAF1	23,270,377 – 23,270,494	- - - - - - - - -	13980	23,270,377 – 23,270,494	-	6	120	94.65	-2.08	0.88	0.976471
8708	3R_DroMel_CAF1	23,282,427 – 23,282,522	- - - - - - - - -	13981	23,282,427 – 23,282,522	-	6	97	74.26	-1.52	0.57	0.654380
8709	3R_DroMel_CAF1	23,285,133 – 23,285,368	- - - - - - - - -	13982	23,285,133 – 23,285,227	+	6	99	79.24	-3.18	0.71	0.977681
				13983	23,285,199 – 23,285,303	-	6	118	74.85	-1.05	0.76	0.842509
				13984	23,285,227 – 23,285,341	-	6	118	80.98	-1.08	0.79	0.500000
				13985	23,285,265 – 23,285,368	-	4	116	87.84	-1.66	0.84	0.765926
8710	3R_DroMel_CAF1	23,286,226 – 23,286,318	- - - - - - - - -	13986	23,286,226 – 23,286,318	+	6	110	79.49	-2.33	0.72	0.948338
8710	3R_DroMel_CAF1	23,286,226 – 23,286,318	- - - - - - - - -	13987	23,286,226 – 23,286,318	-	6	110	79.49	-1.87	0.68	0.872934
8711	3R_DroMel_CAF1	23,287,900 – 23,288,001	- - - - - - - - -	13988	23,287,900 – 23,288,001	-	6	107	78.90	-2.44	0.60	0.944779
8712	3R_DroMel_CAF1	23,288,670 – 23,288,798	- - - - - - - - -	13989	23,288,670 – 23,288,777	+	6	113	72.41	-1.82	0.41	0.562856
				13990	23,288,670 – 23,288,777	-	6	113	72.41	-1.56	0.59	0.834509
				13991	23,288,706 – 23,288,798	+	6	106	73.63	-2.30	0.48	0.969519
				13992	23,288,706 – 23,288,798	-	6	106	73.63	-1.86	0.64	0.966965
8713	3R_DroMel_CAF1	23,291,605 – 23,291,722	- - - "knownCDS=Parent=FBtr0085182;Name=CG13978-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13978-RA" - - - - -	13993	23,291,605 – 23,291,722	-	6	117	75.50	-2.00	0.45	0.698855
8714	3R_DroMel_CAF1	23,296,732 – 23,296,872	- - - - - - - - -	13994	23,296,732 – 23,296,836	-	6	109	79.42	-2.25	0.63	0.918305
8714	3R_DroMel_CAF1	23,296,732 – 23,296,872	- - - - - - - - -	13995	23,296,761 – 23,296,872	-	6	116	82.31	-1.78	0.65	0.577145
8715	3R_DroMel_CAF1	23,297,303 – 23,297,408	- - - - - - - - -	13996	23,297,303 – 23,297,408	+	6	106	80.52	-2.55	0.56	0.867753
8715	3R_DroMel_CAF1	23,297,303 – 23,297,408	- - - - - - - - -	13997	23,297,303 – 23,297,408	-	6	106	80.52	-2.89	0.60	0.938189
8716	3R_DroMel_CAF1	23,298,304 – 23,298,398	- - - - - - - - -	13998	23,298,304 – 23,298,398	+	6	105	72.88	-2.09	0.45	0.915207
8717	3R_DroMel_CAF1	23,299,724 – 23,299,832	- - - - - - - - -	13999	23,299,724 – 23,299,832	+	6	110	81.29	-1.39	0.67	0.539745
8718	3R_DroMel_CAF1	23,300,696 – 23,300,789	- - - - - - - - -	14000	23,300,696 – 23,300,789	+	6	111	87.89	-1.90	0.81	0.562387
8718	3R_DroMel_CAF1	23,300,696 – 23,300,789	- - - - - - - - -	14001	23,300,696 – 23,300,789	-	6	111	87.89	-1.97	0.85	0.810688
8719	3R_DroMel_CAF1	23,302,337 – 23,302,437	- - - - - - - - -	14002	23,302,337 – 23,302,437	+	6	106	81.78	-2.41	0.57	0.706025
8720	3R_DroMel_CAF1	23,302,504 – 23,302,597	- - - - - - - - -	14003	23,302,504 – 23,302,597	-	6	102	81.49	-1.69	0.68	0.679253
8721	3R_DroMel_CAF1	23,303,005 – 23,303,144	- - - - - - - - -	14004	23,303,005 – 23,303,115	+	5	119	78.91	-2.11	0.69	0.947969
				14005	23,303,005 – 23,303,115	-	5	119	78.91	-2.84	0.73	0.997184
				14006	23,303,036 – 23,303,144	-	6	120	82.81	-3.75	0.51	0.868495
8722	3R_DroMel_CAF1	23,303,189 – 23,303,294	- - - - - - - - -	14007	23,303,189 – 23,303,294	-	6	119	72.81	-2.29	0.38	0.926258
8723	3R_DroMel_CAF1	23,304,787 – 23,304,907	- - - "knownCDS=Parent=FBtr0085183;Name=Cyp6a18-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13977-RA" - - - - -	14008	23,304,787 – 23,304,907	+	5	120	94.17	-1.24	0.89	0.679641
8723	3R_DroMel_CAF1	23,304,787 – 23,304,907		14009	23,304,787 – 23,304,907	-	5	120	94.17	-1.57	0.87	0.922359
8724	3R_DroMel_CAF1	23,305,302 – 23,305,395	- - - "knownCDS=Parent=FBtr0085183;Name=Cyp6a18-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13977-RA" - - - - -	14010	23,305,302 – 23,305,395	+	5	93	89.57	-1.87	0.72	0.634584
8725	3R_DroMel_CAF1	23,305,755 – 23,305,875	- - - "knownCDS=Parent=FBtr0085183;Name=Cyp6a18-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13977-RA" - - - - -	14011	23,305,755 – 23,305,875	-	5	120	94.50	-1.60	0.88	0.949074
8726	3R_DroMel_CAF1	23,307,586 – 23,307,689	- - - - - - - - -	14012	23,307,586 – 23,307,689	+	6	120	79.75	-1.59	0.60	0.548622
8727	3R_DroMel_CAF1	23,310,507 – 23,310,640	- - - - - - - - -	14013	23,310,507 – 23,310,610	-	6	108	80.50	-1.55	0.65	0.627891
8727	3R_DroMel_CAF1	23,310,507 – 23,310,640	- - - - - - - - -	14014	23,310,544 – 23,310,640	+	4	106	86.83	-2.77	0.67	0.896075
8728	3R_DroMel_CAF1	23,310,677 – 23,310,835	- - - - - - - - -	14015	23,310,677 – 23,310,769	-	6	113	75.47	-2.31	0.42	0.876387
				14016	23,310,700 – 23,310,808	-	6	114	79.06	-2.07	0.67	0.921588
				14017	23,310,730 – 23,310,835	+	5	105	94.07	-2.14	0.85	0.991460
				14018	23,310,730 – 23,310,835	-	5	105	94.07	-1.90	0.93	0.997637
8729	3R_DroMel_CAF1	23,312,864 – 23,312,956	- - - - - - - - -	14019	23,312,864 – 23,312,956	+	6	120	81.25	-1.60	0.68	0.660563
8730	3R_DroMel_CAF1	23,313,575 – 23,313,670	- - - - - - - - -	14020	23,313,575 – 23,313,670	+	6	110	83.55	-1.99	0.66	0.526145
8731	3R_DroMel_CAF1	23,315,685 – 23,315,833	- - - - - - - - -	14021	23,315,685 – 23,315,804	-	5	119	91.76	-1.57	0.75	0.508280
8731	3R_DroMel_CAF1	23,315,685 – 23,315,833	- - - - - - - - -	14022	23,315,725 – 23,315,833	+	6	118	78.38	-1.51	0.62	0.664362
8732	3R_DroMel_CAF1	23,316,687 – 23,316,777	- - - - - - - - -	14023	23,316,687 – 23,316,777	-	6	107	82.70	-1.79	0.69	0.621782
8733	3R_DroMel_CAF1	23,318,830 – 23,318,972	- - - - - - - - -	14024	23,318,830 – 23,318,920	+	5	90	94.78	-2.25	0.93	0.999534
				14025	23,318,830 – 23,318,920	-	5	90	94.78	-1.31	0.94	0.893899
				14026	23,318,844 – 23,318,947	+	5	116	90.48	-3.28	0.75	0.983252
				14027	23,318,844 – 23,318,947	-	5	116	90.48	-2.04	0.79	0.927775
				14028	23,318,880 – 23,318,972	+	5	105	84.11	-2.23	0.58	0.638256
				14029	23,318,880 – 23,318,972	-	5	105	84.11	-2.08	0.62	0.664710
8734	3R_DroMel_CAF1	23,321,434 – 23,321,529	- - - - - - - - -	14030	23,321,434 – 23,321,529	+	6	117	79.24	-2.90	0.61	0.973295
8734	3R_DroMel_CAF1	23,321,434 – 23,321,529	- - - - - - - - -	14031	23,321,434 – 23,321,529	-	6	117	79.24	-1.43	0.62	0.555893
8735	3R_DroMel_CAF1	23,322,682 – 23,322,780	- - - - - - - - -	14032	23,322,682 – 23,322,780	+	6	104	92.07	-1.04	0.94	0.663358
8736	3R_DroMel_CAF1	23,323,817 – 23,323,916	- - - - - - - - -	14033	23,323,817 – 23,323,916	-	6	106	81.97	-1.74	0.67	0.642210
8737	3R_DroMel_CAF1	23,324,594 – 23,324,726	- - - - - - - - -	14034	23,324,594 – 23,324,697	-	6	114	88.88	-2.33	0.81	0.733435
				14035	23,324,622 – 23,324,726	+	6	118	81.06	-1.31	0.88	0.661014
				14036	23,324,622 – 23,324,726	-	6	118	81.06	-1.36	0.71	0.614099
8738	3R_DroMel_CAF1	23,325,882 – 23,326,012	- - - - - - - - -	14037	23,325,882 – 23,325,973	-	5	117	88.15	-1.57	0.84	0.752911
				14038	23,325,904 – 23,326,012	+	6	112	82.87	-2.06	0.80	0.826737
				14039	23,325,904 – 23,326,012	-	6	112	82.87	-2.14	0.81	0.857650
8739	3R_DroMel_CAF1	23,326,655 – 23,326,745	- - - - - - - - -	14040	23,326,655 – 23,326,745	-	6	110	72.11	-1.91	0.56	0.954807
8740	3R_DroMel_CAF1	23,326,865 – 23,326,960	- - - - - - - - -	14041	23,326,865 – 23,326,960	-	6	101	77.34	-2.34	0.41	0.716481
8741	3R_DroMel_CAF1	23,329,307 – 23,329,458	- - - - - - - - -	14042	23,329,307 – 23,329,418	-	5	120	90.72	-1.72	0.84	0.910105
				14043	23,329,342 – 23,329,458	+	5	120	94.88	-1.52	0.87	0.882196
				14044	23,329,342 – 23,329,458	-	5	120	94.88	-2.56	0.86	0.998464
8742	3R_DroMel_CAF1	23,329,564 – 23,329,723	- - - - - - - - -	14045	23,329,564 – 23,329,683	-	5	120	96.23	-1.75	0.82	0.761228
8742	3R_DroMel_CAF1	23,329,564 – 23,329,723	- - - - - - - - -	14046	23,329,604 – 23,329,723	-	5	120	97.99	-1.58	0.84	0.582414
8743	3R_DroMel_CAF1	23,329,794 – 23,329,913	- - - - - - - - -	14047	23,329,794 – 23,329,913	+	5	120	96.98	-1.31	0.86	0.500000
8744	3R_DroMel_CAF1	23,342,336 – 23,342,438	- - - "knownCDS=Parent=FBtr0085212;Name=CG13972-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13972-RA" - - - - -	14048	23,342,336 – 23,342,438	-	6	117	75.02	-1.79	0.50	0.691398
8745	3R_DroMel_CAF1	23,346,689 – 23,346,781	- - - - - - - - -	14049	23,346,689 – 23,346,781	+	6	95	74.53	-1.98	0.57	0.943224
8745	3R_DroMel_CAF1	23,346,689 – 23,346,781	- - - - - - - - -	14050	23,346,689 – 23,346,781	-	6	95	74.53	-2.28	0.68	0.989791
8746	3R_DroMel_CAF1	23,358,051 – 23,358,142	- - - "knownCDS=Parent=FBtr0085185;Name=CG12885-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12885-RA" - - - - -	14051	23,358,051 – 23,358,142	+	6	120	75.86	-1.58	0.74	0.945932
8747	3R_DroMel_CAF1	23,358,556 – 23,358,651	- - - "knownCDS=Parent=FBtr0085185;Name=CG12885-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12885-RA" - - - - -	14052	23,358,556 – 23,358,651	-	6	113	74.59	-2.45	0.41	0.948141
8748	3R_DroMel_CAF1	23,359,787 – 23,359,900	- - - - - - - - -	14053	23,359,787 – 23,359,900	+	5	113	95.40	-2.10	0.93	0.999019
8748	3R_DroMel_CAF1	23,359,787 – 23,359,900	- - - - - - - - -	14054	23,359,787 – 23,359,900	-	5	113	95.40	-1.59	0.90	0.954024
8749	3R_DroMel_CAF1	23,363,138 – 23,363,250	- - - - - - - - -	14055	23,363,138 – 23,363,250	-	5	112	86.57	-1.89	0.67	0.549600
8750	3R_DroMel_CAF1	23,364,043 – 23,364,147	- - - - - - - - -	14056	23,364,043 – 23,364,147	-	6	117	78.64	-1.81	0.53	0.561947
8751	3R_DroMel_CAF1	23,365,893 – 23,365,999	- - - - - - - - -	14057	23,365,893 – 23,365,999	-	5	106	91.23	-1.74	0.78	0.774101
8752	3R_DroMel_CAF1	23,367,308 – 23,367,411	- - - - - - - - -	14058	23,367,308 – 23,367,411	-	6	111	79.60	-1.86	0.53	0.524291
8753	3R_DroMel_CAF1	23,367,842 – 23,367,952	- - - - - - - - -	14059	23,367,842 – 23,367,952	+	5	110	91.58	-3.59	0.87	0.999894
8754	3R_DroMel_CAF1	23,369,276 – 23,369,386	- - - "knownCDS=Parent=FBtr0085186;Name=Gr98b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31059-RA" - - - - -	14060	23,369,276 – 23,369,386	+	5	113	87.58	-1.56	0.85	0.745891
8755	3R_DroMel_CAF1	23,369,617 – 23,369,708	- - - - - - - - -	14061	23,369,617 – 23,369,708	+	3	120	75.83	-1.14	0.75	0.535989
8755	3R_DroMel_CAF1	23,369,617 – 23,369,708	- - - - - - - - -	14062	23,369,617 – 23,369,708	-	3	120	75.83	-1.93	0.82	0.994607
8756	3R_DroMel_CAF1	23,375,700 – 23,375,817	- - - "knownCDS=Parent=FBtr0085211;Name=Klp98A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5658-RA" - - - - -	14063	23,375,700 – 23,375,817	-	6	120	82.37	-1.65	0.67	0.572425
8757	3R_DroMel_CAF1	23,376,290 – 23,376,402	- - - "knownCDS=Parent=FBtr0085211;Name=Klp98A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5658-RA" - - - - -	14064	23,376,290 – 23,376,402	+	6	120	86.76	-1.72	0.81	0.527865
8758	3R_DroMel_CAF1	23,376,795 – 23,376,903	- - - - - - - - -	14065	23,376,795 – 23,376,903	+	6	117	77.64	-0.91	0.72	0.500000
8759	3R_DroMel_CAF1	23,378,991 – 23,379,094	- - - - - - - - -	14066	23,378,991 – 23,379,094	+	5	103	95.15	-2.99	0.87	0.999607
8759	3R_DroMel_CAF1	23,378,991 – 23,379,094	- - - - - - - - -	14067	23,378,991 – 23,379,094	-	5	103	95.15	-2.17	0.80	0.932735
8760	3R_DroMel_CAF1	23,384,508 – 23,384,620	- - - - - - - - -	14068	23,384,508 – 23,384,620	-	6	117	77.22	-1.82	0.54	0.725181
8761	3R_DroMel_CAF1	23,384,841 – 23,384,971	- - - - - - - - -	14069	23,384,841 – 23,384,949	+	4	108	84.72	-2.00	0.87	0.932048
				14070	23,384,841 – 23,384,949	-	4	108	84.72	-2.79	0.82	0.991888
				14071	23,384,869 – 23,384,971	+	4	102	82.19	-2.52	0.73	0.982169
				14072	23,384,869 – 23,384,971	-	4	102	82.19	-2.17	0.74	0.939622
8762	3R_DroMel_CAF1	23,394,769 – 23,394,921	- - - - - - - - -	14073	23,394,769 – 23,394,889	-	5	120	92.33	-2.69	0.89	0.999758
8762	3R_DroMel_CAF1	23,394,769 – 23,394,921	- - - - - - - - -	14074	23,394,809 – 23,394,921	-	5	113	85.79	-2.09	0.77	0.892122
8763	3R_DroMel_CAF1	23,396,583 – 23,396,716	- - - - - - - - -	14075	23,396,583 – 23,396,676	+	5	95	83.14	-3.19	0.60	0.978525
				14076	23,396,583 – 23,396,676	-	5	95	83.14	-3.17	0.66	0.989288
				14077	23,396,605 – 23,396,716	+	5	113	77.71	-1.79	0.57	0.657278
8764	3R_DroMel_CAF1	23,397,072 – 23,397,182	- - - - - - - - -	14078	23,397,072 – 23,397,182	-	5	110	79.27	-1.87	0.24	0.500000
8765	3R_DroMel_CAF1	23,399,869 – 23,400,002	- - - - - - - - -	14079	23,399,869 – 23,399,970	+	5	115	88.04	-2.24	0.81	0.974457
				14080	23,399,869 – 23,399,970	-	5	115	88.04	-2.80	0.69	0.905552
				14081	23,399,894 – 23,400,002	+	6	114	80.34	-3.40	0.59	0.972192
				14082	23,399,894 – 23,400,002	-	6	114	80.34	-2.78	0.58	0.930254
8766	3R_DroMel_CAF1	23,400,011 – 23,400,112	- - - - - - - - -	14083	23,400,011 – 23,400,112	+	4	116	81.10	-1.83	0.63	0.645668
8766	3R_DroMel_CAF1	23,400,011 – 23,400,112	- - - - - - - - -	14084	23,400,011 – 23,400,112	-	4	116	81.10	-1.82	0.72	0.799662
8767	3R_DroMel_CAF1	23,404,077 – 23,404,168	- - - - - - - - -	14085	23,404,077 – 23,404,168	+	6	100	73.51	-2.06	0.35	0.579422
8768	3R_DroMel_CAF1	23,405,046 – 23,405,163	- - - - - - - - -	14086	23,405,046 – 23,405,139	+	5	96	90.47	-1.96	0.83	0.960941
				14087	23,405,046 – 23,405,139	-	5	96	90.47	-1.69	0.76	0.671421
				14088	23,405,070 – 23,405,163	+	5	94	84.80	-1.67	0.73	0.600048
				14089	23,405,070 – 23,405,163	-	5	94	84.80	-1.63	0.82	0.685000
8769	3R_DroMel_CAF1	23,405,203 – 23,405,294	- - - - - - - - -	14090	23,405,203 – 23,405,294	+	5	91	83.55	-2.04	0.57	0.519305
8769	3R_DroMel_CAF1	23,405,203 – 23,405,294	- - - - - - - - -	14091	23,405,203 – 23,405,294	-	5	91	83.55	-2.34	0.80	0.968006
8770	3R_DroMel_CAF1	23,408,841 – 23,409,038	- - - "knownCDS=Parent=FBtr0085189;Name=raps-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5692-RA" - - - - -	14092	23,408,841 – 23,408,958	-	6	117	77.89	-1.93	0.55	0.784992
8770	3R_DroMel_CAF1	23,408,841 – 23,409,038		14093	23,408,921 – 23,409,038	+	6	120	83.73	-1.68	0.73	0.539706
8771	3R_DroMel_CAF1	23,424,997 – 23,425,092	- - - "knownCDS=Parent=FBtr0085201;Name=dsd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5634-RA" - - - - -	14094	23,424,997 – 23,425,092	-	6	112	78.17	-0.95	0.88	0.626376
8772	3R_DroMel_CAF1	23,426,319 – 23,426,430	- - - "knownCDS=Parent=FBtr0085201;Name=dsd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5634-RA" - - - - -	14095	23,426,319 – 23,426,430	-	6	114	78.16	-1.56	0.58	0.563907
8773	3R_DroMel_CAF1	23,432,844 – 23,432,939	- - - - - - - - -	14096	23,432,844 – 23,432,939	+	5	95	96.53	-3.10	0.90	0.999797
8773	3R_DroMel_CAF1	23,432,844 – 23,432,939	- - - - - - - - -	14097	23,432,844 – 23,432,939	-	5	95	96.53	-1.99	0.87	0.984011
8774	3R_DroMel_CAF1	23,435,116 – 23,435,206	- - - - - - - - -	14098	23,435,116 – 23,435,206	-	5	101	86.86	-1.89	0.91	0.963469
8775	3R_DroMel_CAF1	23,436,159 – 23,436,258	- - - - - - - - -	14099	23,436,159 – 23,436,258	-	6	113	80.32	-1.65	0.60	0.572498
8776	3R_DroMel_CAF1	23,436,337 – 23,436,429	- - - - - - - - -	14100	23,436,337 – 23,436,429	-	4	92	83.92	-1.58	0.80	0.651901
8777	3R_DroMel_CAF1	23,437,511 – 23,437,610	- - - - - - - - -	14101	23,437,511 – 23,437,610	-	5	105	91.57	-2.01	0.95	0.998880
8778	3R_DroMel_CAF1	23,445,495 – 23,445,588	- - - - - - - - -	14102	23,445,495 – 23,445,588	+	6	114	76.52	-2.06	0.46	0.731316
8779	3R_DroMel_CAF1	23,446,113 – 23,446,214	- - - - - - - - -	14103	23,446,113 – 23,446,214	+	6	115	76.35	-2.11	0.60	0.957103
8779	3R_DroMel_CAF1	23,446,113 – 23,446,214	- - - - - - - - -	14104	23,446,113 – 23,446,214	-	6	115	76.35	-2.20	0.41	0.692930
8780	3R_DroMel_CAF1	23,454,733 – 23,454,826	- - - - - - - - -	14105	23,454,733 – 23,454,826	+	6	96	76.47	-2.06	0.56	0.920923
8781	3R_DroMel_CAF1	23,461,010 – 23,461,130	- - - "knownCDS=Parent=FBtr0085199;Name=CG5611-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5611-RA" - - - - -	14106	23,461,010 – 23,461,130	+	6	120	79.11	-1.74	0.69	0.862861
8782	3R_DroMel_CAF1	23,461,999 – 23,462,137	- - - - - - - - -	14107	23,461,999 – 23,462,110	-	5	117	77.60	-2.27	0.45	0.928847
8782	3R_DroMel_CAF1	23,461,999 – 23,462,137	- - - - - - - - -	14108	23,462,036 – 23,462,137	+	4	114	73.15	-1.90	0.66	0.967800
8783	3R_DroMel_CAF1	23,468,917 – 23,469,054	- - - - - - - - -	14109	23,468,917 – 23,469,016	+	3	110	81.52	-3.29	0.73	0.995273
				14110	23,468,917 – 23,469,016	-	3	110	81.52	-2.10	0.61	0.652476
				14111	23,468,947 – 23,469,054	+	3	118	82.49	-2.86	0.92	0.995829
				14112	23,468,947 – 23,469,054	-	3	118	82.49	-2.16	0.71	0.847976
8784	3R_DroMel_CAF1	23,473,729 – 23,473,819	- - - "knownCDS=Parent=FBtr0085198;Name=CG31058-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31058-RA" - - - - -	14113	23,473,729 – 23,473,819	+	5	109	75.55	-2.04	0.58	0.938302
8785	3R_DroMel_CAF1	23,473,904 – 23,474,000	- - - "knownCDS=Parent=FBtr0085198;Name=CG31058-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31058-RA" - - - - -	14114	23,473,904 – 23,474,000	-	6	96	87.78	-1.96	0.81	0.569100
8786	3R_DroMel_CAF1	23,474,803 – 23,474,908	- - - - - - - - -	14115	23,474,803 – 23,474,908	+	6	113	77.18	-1.95	0.48	0.614448
8787	3R_DroMel_CAF1	23,478,580 – 23,478,700	- - - "knownCDS=Parent=FBtr0085194;Name=RpS10a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12275-RA" - - - - -	14116	23,478,580 – 23,478,700	+	4	120	90.00	-1.66	0.81	0.714259
8788	3R_DroMel_CAF1	23,479,490 – 23,479,589	- - - - - - - - -	14117	23,479,490 – 23,479,589	-	4	100	93.47	-1.61	0.85	0.648387
8789	3R_DroMel_CAF1	23,481,738 – 23,481,828	- - - - - - - - -	14118	23,481,738 – 23,481,828	+	5	90	86.99	-1.45	0.89	0.661077
8790	3R_DroMel_CAF1	23,484,437 – 23,484,557	- - - "knownCDS=Parent=FBtr0085196, FBtr0085195;Name=Mlc1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5596-RB, FlyBase+Annotation+IDs:CG5596-RA" - - - - -	14119	23,484,437 – 23,484,557	+	6	120	93.33	-1.38	0.86	0.500000
8791	3R_DroMel_CAF1	23,484,733 – 23,484,824	- - - - - - - - -	14120	23,484,733 – 23,484,824	-	5	101	83.21	-1.80	0.75	0.752572
8792	3R_DroMel_CAF1	23,487,087 – 23,487,180	- - - - - - - - -	14121	23,487,087 – 23,487,180	-	6	98	74.93	-1.82	0.59	0.912049
8793	3R_DroMel_CAF1	23,487,947 – 23,488,054	- - - - - - - - -	14122	23,487,947 – 23,488,054	+	5	113	91.58	-1.61	0.91	0.967616
8793	3R_DroMel_CAF1	23,487,947 – 23,488,054	- - - - - - - - -	14123	23,487,947 – 23,488,054	-	5	113	91.58	-2.67	0.83	0.997195
8794	3R_DroMel_CAF1	23,492,336 – 23,492,427	- - - - - - - - -	14124	23,492,336 – 23,492,427	+	4	92	87.73	-1.59	0.84	0.711532
8795	3R_DroMel_CAF1	23,496,316 – 23,496,410	- - - - - - - - -	14125	23,496,316 – 23,496,410	-	6	104	77.80	-1.44	0.81	0.895403
8796	3R_DroMel_CAF1	23,508,688 – 23,508,778	- - - - - - - - -	14126	23,508,688 – 23,508,778	+	5	104	85.81	-2.42	0.72	0.926688
8796	3R_DroMel_CAF1	23,508,688 – 23,508,778	- - - - - - - - -	14127	23,508,688 – 23,508,778	-	5	104	85.81	-1.64	0.78	0.652346
8797	3R_DroMel_CAF1	23,513,522 – 23,513,632	- - - "knownCDS=Parent=FBtr0085243;Name=CG31055-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31055-RC" - - - - -	14128	23,513,522 – 23,513,632	+	6	110	76.12	-1.29	0.73	0.862930
8798	3R_DroMel_CAF1	23,514,338 – 23,514,442	- - - - - - - - -	14129	23,514,338 – 23,514,442	+	5	104	90.94	-2.35	0.84	0.994655
8798	3R_DroMel_CAF1	23,514,338 – 23,514,442	- - - - - - - - -	14130	23,514,338 – 23,514,442	-	5	104	90.94	-2.22	0.84	0.990330
8799	3R_DroMel_CAF1	23,522,407 – 23,522,501	- - - - - - - - -	14131	23,522,407 – 23,522,501	-	6	104	71.67	-1.94	0.37	0.652664
8800	3R_DroMel_CAF1	23,525,023 – 23,525,122	- - - - - - - - -	14132	23,525,023 – 23,525,122	-	6	100	83.15	-1.38	0.76	0.500000
8801	3R_DroMel_CAF1	23,526,859 – 23,526,957	- - - "knownCDS=Parent=FBtr0085220;Name=btz-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12878-RA" - - - - -	14133	23,526,859 – 23,526,957	+	6	110	83.14	-2.09	0.71	0.698869
8802	3R_DroMel_CAF1	23,527,977 – 23,528,082	- - - "knownCDS=Parent=FBtr0085220;Name=btz-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12878-RA" - - - - -	14134	23,527,977 – 23,528,082	+	6	112	73.34	-2.21	0.49	0.965942
8803	3R_DroMel_CAF1	23,528,320 – 23,528,418	- - - "knownCDS=Parent=FBtr0085220;Name=btz-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12878-RA" - - - - -	14135	23,528,320 – 23,528,418	+	6	108	73.96	-1.86	0.61	0.952613
8804	3R_DroMel_CAF1	23,532,780 – 23,532,990	- - - - - - - - -	14136	23,532,780 – 23,532,900	-	3	120	93.33	-1.79	0.89	0.595207
				14137	23,532,860 – 23,532,980	+	3	120	93.61	-1.54	0.92	0.507320
				14138	23,532,900 – 23,532,990	-	3	90	93.70	-1.95	0.99	0.932257
8805	3R_DroMel_CAF1	23,535,139 – 23,535,239	- - - - - - - - -	14139	23,535,139 – 23,535,239	+	5	104	76.14	-1.85	0.21	0.816065
8805	3R_DroMel_CAF1	23,535,139 – 23,535,239	- - - - - - - - -	14140	23,535,139 – 23,535,239	-	5	104	76.14	-2.10	0.40	0.889221
8806	3R_DroMel_CAF1	23,540,443 – 23,540,533	- - - - - - - - -	14141	23,540,443 – 23,540,533	+	6	120	79.62	-2.22	0.54	0.779752
8807	3R_DroMel_CAF1	23,542,048 – 23,542,166	- - - - - - - - -	14142	23,542,048 – 23,542,166	+	5	120	79.63	-1.82	0.58	0.616282
8808	3R_DroMel_CAF1	23,545,052 – 23,545,145	- - - - - - - - -	14143	23,545,052 – 23,545,145	+	6	101	79.60	-3.02	0.72	0.971170
8809	3R_DroMel_CAF1	23,550,397 – 23,550,495	- - - - - - - - -	14144	23,550,397 – 23,550,495	-	6	109	84.35	-1.57	0.78	0.516271
8810	3R_DroMel_CAF1	23,560,630 – 23,560,720	- - - - - - - - -	14145	23,560,630 – 23,560,720	+	6	93	83.52	-1.64	0.73	0.545838
8811	3R_DroMel_CAF1	23,560,951 – 23,561,053	- - - - - - - - -	14146	23,560,951 – 23,561,053	+	4	102	90.52	-1.56	0.75	0.521705
8812	3R_DroMel_CAF1	23,563,759 – 23,563,860	- - - - - - - - -	14147	23,563,759 – 23,563,860	-	6	116	78.91	-2.89	0.44	0.922404
8813	3R_DroMel_CAF1	23,569,795 – 23,569,897	- - - "knownCDS=Parent=FBtr0085224;Name=Ets98B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5583-RA" - - - - -	14148	23,569,795 – 23,569,897	-	6	105	79.83	-1.22	0.67	0.509771
8814	3R_DroMel_CAF1	23,572,473 – 23,572,590	- - - "knownCDS=Parent=FBtr0085224;Name=Ets98B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5583-RA" - - - - -	14149	23,572,473 – 23,572,590	+	6	117	78.70	-1.76	0.69	0.886967
8815	3R_DroMel_CAF1	23,588,213 – 23,588,312	- - - - - - - - -	14150	23,588,213 – 23,588,312	+	5	101	87.14	-1.94	0.66	0.508054
8815	3R_DroMel_CAF1	23,588,213 – 23,588,312	- - - - - - - - -	14151	23,588,213 – 23,588,312	-	5	101	87.14	-1.98	0.69	0.663651
8816	3R_DroMel_CAF1	23,596,903 – 23,597,028	- - - "knownCDS=Parent=FBtr0085234;Name=CG12427-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12427-RA" - - - - -	14152	23,596,903 – 23,596,998	+	6	104	78.44	-1.94	0.58	0.817359
				14153	23,596,903 – 23,596,998	-	6	104	78.44	-3.21	0.72	0.982436
				14154	23,596,934 – 23,597,028	+	6	110	77.63	-2.80	0.48	0.971791
				14155	23,596,934 – 23,597,028	-	6	110	77.63	-3.62	0.70	0.988230
8817	3R_DroMel_CAF1	23,601,558 – 23,601,751	- - - - - - - - -	14156	23,601,558 – 23,601,656	+	5	105	95.12	-2.99	0.76	0.939532
				14157	23,601,558 – 23,601,656	-	5	105	95.12	-3.95	0.74	0.941047
				14158	23,601,584 – 23,601,691	+	6	115	84.62	-3.62	0.77	0.936358
				14159	23,601,584 – 23,601,691	-	6	115	84.62	-3.21	0.80	0.934186
				14160	23,601,656 – 23,601,751	+	5	107	84.31	-2.21	0.66	0.807620
				14161	23,601,656 – 23,601,751	-	5	107	84.31	-1.92	0.78	0.837489
8818	3R_DroMel_CAF1	23,602,287 – 23,602,412	- - - - - - - - -	14162	23,602,287 – 23,602,398	-	4	111	80.93	-1.85	0.69	0.787579
8818	3R_DroMel_CAF1	23,602,287 – 23,602,412	- - - - - - - - -	14163	23,602,318 – 23,602,412	-	3	96	79.09	-2.42	0.53	0.580483
8819	3R_DroMel_CAF1	23,603,533 – 23,603,637	- - - - - - - - -	14164	23,603,533 – 23,603,637	-	3	107	85.53	-2.07	0.74	0.668302
8820	3R_DroMel_CAF1	23,603,919 – 23,604,023	- - - - - - - - -	14165	23,603,919 – 23,604,023	-	6	111	90.03	-2.71	0.79	0.760279
8821	3R_DroMel_CAF1	23,604,882 – 23,604,986	- - - "knownCDS=Parent=FBtr0085233;Name=CG12875-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12875-RA" - - - - -	14166	23,604,882 – 23,604,986	-	6	107	86.16	-2.13	0.81	0.746926
8822	3R_DroMel_CAF1	23,615,051 – 23,615,146	- - - - - - - - -	14167	23,615,051 – 23,615,146	+	3	103	81.27	-1.56	0.69	0.522148
8822	3R_DroMel_CAF1	23,615,051 – 23,615,146	- - - - - - - - -	14168	23,615,051 – 23,615,146	-	3	103	81.27	-2.44	0.82	0.979647
8823	3R_DroMel_CAF1	23,615,963 – 23,616,056	- - - - - - - - -	14169	23,615,963 – 23,616,056	-	5	108	71.18	-1.70	0.23	0.601645
8824	3R_DroMel_CAF1	23,616,654 – 23,616,745	- - - - - - - - -	14170	23,616,654 – 23,616,745	+	4	99	71.23	-2.12	0.58	0.985591
8825	3R_DroMel_CAF1	23,620,768 – 23,620,863	- - - - - - - - -	14171	23,620,768 – 23,620,863	+	5	104	78.83	-1.46	0.68	0.517494
8826	3R_DroMel_CAF1	23,624,875 – 23,624,989	- - - - - - - - -	14172	23,624,875 – 23,624,989	+	4	116	88.70	-2.16	0.65	0.551555
8827	3R_DroMel_CAF1	23,626,509 – 23,626,607	- - - - - - - - -	14173	23,626,509 – 23,626,607	-	6	117	72.45	-1.86	0.50	0.867421
8828	3R_DroMel_CAF1	23,626,707 – 23,626,800	- - - - - - - - -	14174	23,626,707 – 23,626,800	+	6	106	80.84	-1.36	0.73	0.651610
8828	3R_DroMel_CAF1	23,626,707 – 23,626,800	- - - - - - - - -	14175	23,626,707 – 23,626,800	-	6	106	80.84	-1.17	0.83	0.571093
8829	3R_DroMel_CAF1	23,630,613 – 23,630,707	- - - - - - - - -	14176	23,630,613 – 23,630,707	-	6	94	90.43	-2.76	0.79	0.771203
8830	3R_DroMel_CAF1	23,634,531 – 23,634,629	- - - - - - - - -	14177	23,634,531 – 23,634,629	-	6	116	80.61	-1.42	0.77	0.726833
8831	3R_DroMel_CAF1	23,642,544 – 23,642,636	- - - - - - - - -	14178	23,642,544 – 23,642,636	-	6	96	89.53	-1.62	0.85	0.571535
8832	3R_DroMel_CAF1	23,644,794 – 23,644,899	- - - - - - - - -	14179	23,644,794 – 23,644,899	+	6	114	77.05	-1.83	0.63	0.910456
8832	3R_DroMel_CAF1	23,644,794 – 23,644,899	- - - - - - - - -	14180	23,644,794 – 23,644,899	-	6	114	77.05	-1.60	0.61	0.766753
8833	3R_DroMel_CAF1	23,645,154 – 23,645,288	- - - - - - - - -	14181	23,645,154 – 23,645,249	-	6	101	84.20	-3.89	0.59	0.837611
8833	3R_DroMel_CAF1	23,645,154 – 23,645,288	- - - - - - - - -	14182	23,645,177 – 23,645,288	-	6	120	81.53	-3.24	0.37	0.563655
8834	3R_DroMel_CAF1	23,647,478 – 23,647,571	- - - - - - - - -	14183	23,647,478 – 23,647,571	+	6	102	77.67	-2.63	0.41	0.890051
8834	3R_DroMel_CAF1	23,647,478 – 23,647,571	- - - - - - - - -	14184	23,647,478 – 23,647,571	-	6	102	77.67	-2.56	0.31	0.513479
8835	3R_DroMel_CAF1	23,648,551 – 23,648,662	- - - - - - - - -	14185	23,648,551 – 23,648,662	-	6	120	92.75	-2.65	0.83	0.939833
8836	3R_DroMel_CAF1	23,656,781 – 23,656,911	- - - - - - - - -	14186	23,656,781 – 23,656,893	+	6	117	79.88	-1.29	0.69	0.617745
				14187	23,656,781 – 23,656,893	-	6	117	79.88	-1.34	0.69	0.634675
				14188	23,656,819 – 23,656,911	-	6	112	76.40	-2.19	0.59	0.961679
8837	3R_DroMel_CAF1	23,659,064 – 23,659,158	- - - - - - - - -	14189	23,659,064 – 23,659,158	+	6	120	77.99	-1.86	0.62	0.871235
8837	3R_DroMel_CAF1	23,659,064 – 23,659,158	- - - - - - - - -	14190	23,659,064 – 23,659,158	-	6	120	77.99	-1.64	0.64	0.812178
8838	3R_DroMel_CAF1	23,664,377 – 23,664,481	- - - - - - - - -	14191	23,664,377 – 23,664,481	+	6	110	83.11	-2.30	0.70	0.736064
8839	3R_DroMel_CAF1	23,666,276 – 23,666,372	- - - - - - - - -	14192	23,666,276 – 23,666,372	+	6	107	74.72	-1.82	0.52	0.782285
8840	3R_DroMel_CAF1	23,677,568 – 23,677,665	- - - - - - - - -	14193	23,677,568 – 23,677,665	-	6	107	81.99	-2.35	0.65	0.795792
8841	3R_DroMel_CAF1	23,678,409 – 23,678,499	- - - - - - - - -	14194	23,678,409 – 23,678,499	-	5	90	93.11	-1.82	0.83	0.940971
8842	3R_DroMel_CAF1	23,681,113 – 23,681,228	- - "RNAmicro=f:23681127_t:23681227_strand:+_p:0.989359" - - - - - -	14195	23,681,113 – 23,681,206	+	4	93	85.33	-4.05	0.65	0.977930
				14196	23,681,113 – 23,681,206	-	4	93	85.33	-4.12	0.71	0.991926
				14197	23,681,127 – 23,681,228	+	5	101	85.57	-3.40	0.67	0.982019
				14198	23,681,127 – 23,681,228	-	5	101	85.57	-4.53	0.71	0.997364
8843	3R_DroMel_CAF1	23,682,065 – 23,682,224	- - - - - - - - -	14199	23,682,065 – 23,682,156	-	5	91	94.95	-1.91	0.76	0.585079
8843	3R_DroMel_CAF1	23,682,065 – 23,682,224	- - - - - - - - -	14200	23,682,122 – 23,682,224	+	6	120	81.56	-1.34	0.67	0.500000
8844	3R_DroMel_CAF1	23,713,653 – 23,713,748	- - - - - - - - -	14201	23,713,653 – 23,713,748	+	6	115	81.06	-1.44	0.68	0.609212
8845	3R_DroMel_CAF1	23,721,553 – 23,721,681	- - - - - - - - -	14202	23,721,553 – 23,721,645	+	6	98	78.19	-1.78	0.57	0.710635
8845	3R_DroMel_CAF1	23,721,553 – 23,721,681	- - - - - - - - -	14203	23,721,575 – 23,721,681	+	6	109	79.90	-2.62	0.63	0.944163
8846	3R_DroMel_CAF1	23,727,656 – 23,727,750	- - - - - - - - -	14204	23,727,656 – 23,727,750	-	6	108	80.95	-2.08	0.54	0.548702
8847	3R_DroMel_CAF1	23,738,059 – 23,738,151	- - - - - - - - -	14205	23,738,059 – 23,738,151	+	4	112	77.94	-2.03	0.54	0.629805
8848	3R_DroMel_CAF1	23,742,051 – 23,742,164	- - - "knownCDS=Parent=FBtr0085272;Name=CG5003-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5003-RA" - - - - -	14206	23,742,051 – 23,742,164	+	6	113	73.88	-1.53	0.56	0.678478
8849	3R_DroMel_CAF1	23,744,108 – 23,744,221	- - - "knownCDS=Parent=FBtr0085271;Name=CG33213-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33213-RA" - - - - -	14207	23,744,108 – 23,744,221	+	6	113	73.92	-2.03	0.38	0.633900
8850	3R_DroMel_CAF1	23,744,393 – 23,744,507	- - - "knownCDS=Parent=FBtr0085271;Name=CG33213-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33213-RA" - - - - -	14208	23,744,393 – 23,744,507	+	6	114	79.77	-1.82	0.55	0.527773
8851	3R_DroMel_CAF1	23,745,642 – 23,745,802	- - - "knownCDS=Parent=FBtr0085270;Name=CG12259-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12259-RA" - - - - -	14209	23,745,642 – 23,745,762	+	5	120	97.17	-1.21	0.96	0.741240
8851	3R_DroMel_CAF1	23,745,642 – 23,745,802		14210	23,745,682 – 23,745,802	+	5	120	96.67	-1.56	0.93	0.958703
8852	3R_DroMel_CAF1	23,745,962 – 23,746,082	- - - "knownCDS=Parent=FBtr0085270;Name=CG12259-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12259-RA" - - - - -	14211	23,745,962 – 23,746,082	+	5	120	95.50	-1.64	0.90	0.964775
8853	3R_DroMel_CAF1	23,746,482 – 23,746,642	- - - "knownCDS=Parent=FBtr0085270;Name=CG12259-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12259-RA" - - - - -	14212	23,746,482 – 23,746,602	+	5	120	96.33	-1.51	0.86	0.798432
				14213	23,746,522 – 23,746,642	+	5	120	96.33	-1.26	0.89	0.628552
				14214	23,746,522 – 23,746,642	-	5	120	96.33	-1.34	0.86	0.578107
8854	3R_DroMel_CAF1	23,749,690 – 23,749,793	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002584;Name=DmOr_aca3;Dbxref=FB:FBgn0082923 ,GB:AJ809589" - - - - - - - "Flybase=xFBgn0082923:snoRNA:Or-aca3:nuclear_small_nucleolar_RNA_gene\|3e-49"	14215	23,749,690 – 23,749,793	+	6	111	74.70	-1.34	0.62	0.650730
8854	3R_DroMel_CAF1	23,749,690 – 23,749,793		14216	23,749,690 – 23,749,793	-	6	111	74.70	-1.23	0.66	0.733872
8855	3R_DroMel_CAF1	23,760,535 – 23,760,641	- - - "knownCDS=Parent=FBtr0085267;Name=Mes-4-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4976-RA" - - - - -	14217	23,760,535 – 23,760,641	-	6	111	76.71	-1.37	0.66	0.770521
8856	3R_DroMel_CAF1	23,760,848 – 23,760,945	- - - "knownCDS=Parent=FBtr0085267;Name=Mes-4-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4976-RA" - - - - -	14218	23,760,848 – 23,760,945	-	6	105	76.59	-1.77	0.60	0.859555
8857	3R_DroMel_CAF1	23,764,591 – 23,764,685	- - - - - - - - -	14219	23,764,591 – 23,764,685	+	6	101	81.25	-1.45	0.65	0.521260
8858	3R_DroMel_CAF1	23,773,781 – 23,773,872	- - - - - - - - -	14220	23,773,781 – 23,773,872	+	5	120	71.63	-1.83	0.16	0.826329
8858	3R_DroMel_CAF1	23,773,781 – 23,773,872	- - - - - - - - -	14221	23,773,781 – 23,773,872	-	5	120	71.63	-2.36	0.31	0.989427
8859	3R_DroMel_CAF1	23,776,349 – 23,776,456	- - - - - - - - -	14222	23,776,349 – 23,776,456	+	5	119	73.81	-1.72	0.41	0.518377
8859	3R_DroMel_CAF1	23,776,349 – 23,776,456	- - - - - - - - -	14223	23,776,349 – 23,776,456	-	5	119	73.81	-2.10	0.37	0.939397
8860	3R_DroMel_CAF1	23,793,100 – 23,793,220	- - - "knownCDS=Parent=FBtr0085261;Name=betaTub97EF-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4869-RA" - - - "ncRNAdb=MmuscAK041002_unclassifiable\|2e-15" -	14224	23,793,100 – 23,793,220	-	6	120	86.94	-1.67	0.85	0.620189
8861	3R_DroMel_CAF1	23,795,147 – 23,795,267	- - - "knownCDS=Parent=FBtr0085261;Name=betaTub97EF-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4869-RA" - - - "ncRNAdb=MmuscAK041002_unclassifiable\|2e-12" -	14225	23,795,147 – 23,795,267	-	6	120	82.39	-1.52	0.86	0.705625
8862	3R_DroMel_CAF1	23,796,077 – 23,796,171	- - - - - - - - -	14226	23,796,077 – 23,796,171	+	6	120	82.53	-1.35	0.88	0.601525
8863	3R_DroMel_CAF1	23,797,143 – 23,797,236	- - - - - - - - -	14227	23,797,143 – 23,797,236	+	5	93	90.28	-2.39	0.79	0.977081
8864	3R_DroMel_CAF1	23,797,588 – 23,797,688	- - - - - - - - -	14228	23,797,588 – 23,797,688	+	6	103	92.28	-0.92	0.95	0.555194
8865	3R_DroMel_CAF1	23,799,363 – 23,799,473	- - - - - - - - -	14229	23,799,363 – 23,799,473	+	5	114	86.11	-2.24	0.64	0.655136
8865	3R_DroMel_CAF1	23,799,363 – 23,799,473	- - - - - - - - -	14230	23,799,363 – 23,799,473	-	5	114	86.11	-2.75	0.60	0.710282
8866	3R_DroMel_CAF1	23,805,701 – 23,805,818	- - - - - - - - -	14231	23,805,701 – 23,805,818	+	5	119	89.05	-2.25	0.77	0.939788
8867	3R_DroMel_CAF1	23,807,061 – 23,807,196	- - - - - - - - -	14232	23,807,061 – 23,807,157	+	6	100	80.04	-2.53	0.45	0.668306
				14233	23,807,061 – 23,807,157	-	6	100	80.04	-3.05	0.59	0.962916
				14234	23,807,087 – 23,807,196	-	6	110	79.07	-2.61	0.61	0.959516
8868	3R_DroMel_CAF1	23,808,114 – 23,808,212	- - - - - - - - -	14235	23,808,114 – 23,808,212	-	6	102	94.69	-2.12	0.87	0.954244
8869	3R_DroMel_CAF1	23,808,273 – 23,808,468	- - - - - - - - -	14236	23,808,273 – 23,808,373	+	6	106	81.04	-1.14	0.72	0.500000
8869	3R_DroMel_CAF1	23,808,273 – 23,808,468	- - - - - - - - -	14237	23,808,373 – 23,808,468	+	6	95	83.03	-1.35	0.78	0.500000
8870	3R_DroMel_CAF1	23,808,958 – 23,809,068	- - - - - - - - -	14238	23,808,958 – 23,809,068	+	6	113	85.61	-2.17	0.81	0.768605
8871	3R_DroMel_CAF1	23,809,316 – 23,809,425	- - - - - - - - -	14239	23,809,316 – 23,809,425	+	6	117	78.83	-2.00	0.58	0.829889
8872	3R_DroMel_CAF1	23,809,655 – 23,809,749	- - - - - - - - -	14240	23,809,655 – 23,809,749	+	3	98	79.41	-0.16	0.91	0.546677
8873	3R_DroMel_CAF1	23,811,450 – 23,811,549	- - - - - - - - -	14241	23,811,450 – 23,811,549	+	6	107	76.22	-1.90	0.49	0.679040
8874	3R_DroMel_CAF1	23,811,735 – 23,811,827	- - - - - - - - -	14242	23,811,735 – 23,811,827	+	6	96	91.20	-1.67	0.88	0.855252
8875	3R_DroMel_CAF1	23,813,093 – 23,813,188	- - - - - - - - -	14243	23,813,093 – 23,813,188	+	4	102	75.00	-2.00	0.55	0.806148
8876	3R_DroMel_CAF1	23,813,305 – 23,813,408	- - - - - - - - -	14244	23,813,305 – 23,813,408	+	5	109	92.60	-1.79	0.80	0.870095
8877	3R_DroMel_CAF1	23,814,912 – 23,815,111	- - - - - - - - -	14245	23,814,912 – 23,815,016	+	5	119	66.82	-2.32	0.22	0.815088
				14246	23,814,912 – 23,815,016	-	5	119	66.82	-2.34	0.23	0.854412
				14247	23,814,977 – 23,815,086	+	6	115	73.01	-2.26	0.34	0.847444
				14248	23,815,016 – 23,815,111	+	6	116	68.00	-2.16	0.38	0.944653
8878	3R_DroMel_CAF1	23,818,746 – 23,818,846	- - - - - - - - -	14249	23,818,746 – 23,818,846	-	6	110	85.75	-2.25	0.75	0.573115
8879	3R_DroMel_CAF1	23,823,327 – 23,823,420	- - - - - - - - -	14250	23,823,327 – 23,823,420	-	6	111	89.75	-1.32	0.91	0.713005
8880	3R_DroMel_CAF1	23,828,262 – 23,828,362	- - - - - - - - -	14251	23,828,262 – 23,828,362	+	6	106	80.52	-2.27	0.51	0.627136
8880	3R_DroMel_CAF1	23,828,262 – 23,828,362	- - - - - - - - -	14252	23,828,262 – 23,828,362	-	6	106	80.52	-1.94	0.54	0.500000
8881	3R_DroMel_CAF1	23,830,121 – 23,830,227	- - - - - - - - -	14253	23,830,121 – 23,830,227	-	6	120	81.75	-2.09	0.61	0.660236
8882	3R_DroMel_CAF1	23,831,724 – 23,831,818	- - - - - - - - -	14254	23,831,724 – 23,831,818	+	6	98	88.47	-2.16	0.81	0.656118
8883	3R_DroMel_CAF1	23,832,974 – 23,833,068	- - - - - - - - -	14255	23,832,974 – 23,833,068	+	5	98	92.26	-1.72	0.83	0.919399
8884	3R_DroMel_CAF1	23,835,286 – 23,835,392	- - - - - - - - -	14256	23,835,286 – 23,835,392	+	6	120	90.65	-1.42	0.87	0.581224
8885	3R_DroMel_CAF1	23,837,010 – 23,837,221	- - - - - - - - -	14257	23,837,010 – 23,837,100	+	6	113	75.64	-1.69	0.54	0.690545
				14258	23,837,010 – 23,837,100	-	6	113	75.64	-1.51	0.61	0.770489
				14259	23,837,100 – 23,837,190	+	6	90	92.22	-2.01	0.81	0.561436
				14260	23,837,130 – 23,837,221	+	6	100	82.38	-1.58	0.69	0.574720
8886	3R_DroMel_CAF1	23,839,664 – 23,839,757	- - - - - - - - -	14261	23,839,664 – 23,839,757	+	6	102	79.69	-1.36	0.79	0.765504
8887	3R_DroMel_CAF1	23,841,317 – 23,841,414	- - - - - - - - -	14262	23,841,317 – 23,841,414	+	5	107	80.04	-2.22	0.35	0.692032
8888	3R_DroMel_CAF1	23,845,024 – 23,845,115	- - - - - - - - -	14263	23,845,024 – 23,845,115	-	5	103	82.67	-1.54	0.70	0.500000
8889	3R_DroMel_CAF1	23,846,646 – 23,846,741	- - - - - - - - -	14264	23,846,646 – 23,846,741	-	6	114	76.25	-2.45	0.34	0.735084
8890	3R_DroMel_CAF1	23,848,554 – 23,848,646	- - - - - - - - -	14265	23,848,554 – 23,848,646	-	6	110	66.07	-1.48	0.52	0.771932
8891	3R_DroMel_CAF1	23,853,876 – 23,853,977	- - - - - - - - -	14266	23,853,876 – 23,853,977	+	6	111	81.44	-2.36	0.58	0.756054
8892	3R_DroMel_CAF1	23,856,210 – 23,856,345	- - - - - - - - -	14267	23,856,210 – 23,856,320	-	6	111	79.83	-1.26	0.66	0.506510
8892	3R_DroMel_CAF1	23,856,210 – 23,856,345	- - - - - - - - -	14268	23,856,241 – 23,856,345	-	6	104	86.22	-1.91	0.83	0.697482
8893	3R_DroMel_CAF1	23,856,693 – 23,856,786	- - - "knownCDS=Parent=FBtr0085258;Name=CG12872-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12872-RA" - - - - -	14269	23,856,693 – 23,856,786	+	6	94	78.93	-2.36	0.47	0.748252
8893	3R_DroMel_CAF1	23,856,693 – 23,856,786		14270	23,856,693 – 23,856,786	-	6	94	78.93	-1.97	0.57	0.772134
8894	3R_DroMel_CAF1	23,858,227 – 23,858,347	- - - - - - - - -	14271	23,858,227 – 23,858,321	+	6	98	76.51	-2.49	0.48	0.957543
				14272	23,858,227 – 23,858,321	-	6	98	76.51	-2.59	0.51	0.978694
				14273	23,858,255 – 23,858,347	+	5	94	90.11	-2.06	0.70	0.585525
				14274	23,858,255 – 23,858,347	-	5	94	90.11	-3.12	0.73	0.965502
8895	3R_DroMel_CAF1	23,860,432 – 23,860,523	- - - - - - - - -	14275	23,860,432 – 23,860,523	+	6	99	82.44	-1.98	0.66	0.657645
8896	3R_DroMel_CAF1	23,862,281 – 23,862,371	- - - - - - - - -	14276	23,862,281 – 23,862,371	+	6	99	84.82	-2.65	0.78	0.833255
8897	3R_DroMel_CAF1	23,867,684 – 23,867,783	- - - - - - - - -	14277	23,867,684 – 23,867,783	-	3	99	70.95	-2.08	0.57	0.987405
8898	3R_DroMel_CAF1	23,868,352 – 23,868,451	- - - - - - - - -	14278	23,868,352 – 23,868,451	-	6	120	78.74	-1.08	0.77	0.661772
8899	3R_DroMel_CAF1	23,869,048 – 23,869,149	- - - - - - - - -	14279	23,869,048 – 23,869,149	+	6	101	97.56	-1.72	0.90	0.961264
8900	3R_DroMel_CAF1	23,869,237 – 23,869,356	- - - - - - - - -	14280	23,869,237 – 23,869,356	-	6	119	79.32	-1.45	0.66	0.687113
8901	3R_DroMel_CAF1	23,869,923 – 23,870,024	- - - - - - - - -	14281	23,869,923 – 23,870,024	+	6	109	75.87	-1.18	0.66	0.608621
8902	3R_DroMel_CAF1	23,871,869 – 23,871,974	- - - - - - - - -	14282	23,871,869 – 23,871,974	+	6	118	80.43	-2.19	0.70	0.902082
8903	3R_DroMel_CAF1	23,882,152 – 23,882,245	- - - - - - - - -	14283	23,882,152 – 23,882,245	-	6	97	86.36	-3.76	0.66	0.695366
8904	3R_DroMel_CAF1	23,883,168 – 23,883,258	- - - - - - - - -	14284	23,883,168 – 23,883,258	+	6	120	77.25	-1.65	0.62	0.801529
8905	3R_DroMel_CAF1	23,889,575 – 23,889,667	- - - - - - - - -	14285	23,889,575 – 23,889,667	+	4	99	76.67	-2.59	0.75	0.998736
8905	3R_DroMel_CAF1	23,889,575 – 23,889,667	- - - - - - - - -	14286	23,889,575 – 23,889,667	-	4	99	76.67	-2.07	0.60	0.902830
8906	3R_DroMel_CAF1	23,893,303 – 23,893,407	- - - - - - - - -	14287	23,893,303 – 23,893,407	+	5	104	84.50	-2.66	0.62	0.878315
8906	3R_DroMel_CAF1	23,893,303 – 23,893,407	- - - - - - - - -	14288	23,893,303 – 23,893,407	-	5	104	84.50	-2.27	0.56	0.534104
8907	3R_DroMel_CAF1	23,901,979 – 23,902,075	- - - - - - - - -	14289	23,901,979 – 23,902,075	+	6	115	80.48	-1.88	0.56	0.549718
8908	3R_DroMel_CAF1	23,903,135 – 23,903,226	- - - - - - - - -	14290	23,903,135 – 23,903,226	+	6	113	81.67	-1.24	0.78	0.546654
8909	3R_DroMel_CAF1	23,903,969 – 23,904,077	- - - - - - - - -	14291	23,903,969 – 23,904,077	+	4	116	87.32	-1.73	0.70	0.654934
8910	3R_DroMel_CAF1	23,906,881 – 23,906,975	- - - - - - - - -	14292	23,906,881 – 23,906,975	+	5	95	92.35	-1.53	0.83	0.814910
8910	3R_DroMel_CAF1	23,906,881 – 23,906,975	- - - - - - - - -	14293	23,906,881 – 23,906,975	-	5	95	92.35	-2.14	0.97	0.999743
8911	3R_DroMel_CAF1	23,908,295 – 23,908,391	- - - - - - - - -	14294	23,908,295 – 23,908,391	-	5	99	82.82	-3.18	0.72	0.995479
8912	3R_DroMel_CAF1	23,908,712 – 23,908,830	- - - "knownCDS=Parent=FBtr0085259;Name=CG12870-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12870-RA" - - - - -	14295	23,908,712 – 23,908,830	+	6	120	80.43	-1.63	0.62	0.619477
8912	3R_DroMel_CAF1	23,908,712 – 23,908,830		14296	23,908,712 – 23,908,830	-	6	120	80.43	-1.68	0.72	0.803887
8913	3R_DroMel_CAF1	23,909,072 – 23,909,189	- - - "knownCDS=Parent=FBtr0085259;Name=CG12870-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12870-RA" - - - - -	14297	23,909,072 – 23,909,189	-	6	120	75.82	-2.00	0.54	0.894745
8914	3R_DroMel_CAF1	23,911,968 – 23,912,085	- - - - - - - - -	14298	23,911,968 – 23,912,085	+	5	117	89.85	-1.86	0.80	0.900747
8915	3R_DroMel_CAF1	23,921,592 – 23,921,712	- - - - - - - - -	14299	23,921,592 – 23,921,693	+	6	107	85.98	-4.36	0.93	0.998384
				14300	23,921,592 – 23,921,693	-	6	107	85.98	-2.63	0.90	0.986880
				14301	23,921,619 – 23,921,712	-	5	99	87.10	-1.31	0.98	0.679756
8916	3R_DroMel_CAF1	23,923,739 – 23,923,834	- - - - - - - - -	14302	23,923,739 – 23,923,834	-	6	114	79.90	-1.74	0.59	0.636323
8917	3R_DroMel_CAF1	23,928,782 – 23,928,880	- - - - - - - - -	14303	23,928,782 – 23,928,880	-	6	115	79.42	-2.28	0.51	0.761422
8918	3R_DroMel_CAF1	23,929,154 – 23,929,247	- - - - - - - - -	14304	23,929,154 – 23,929,247	-	6	99	86.43	-2.08	0.83	0.791245
8919	3R_DroMel_CAF1	23,930,286 – 23,930,395	- - - - - - - - -	14305	23,930,286 – 23,930,395	-	5	109	95.23	-2.34	0.86	0.996739
8920	3R_DroMel_CAF1	23,932,159 – 23,932,250	- - - - - - - - -	14306	23,932,159 – 23,932,250	-	6	115	78.56	-1.04	0.76	0.635578
8921	3R_DroMel_CAF1	23,933,862 – 23,933,958	- - - - - - - - -	14307	23,933,862 – 23,933,958	+	6	110	78.14	-1.73	0.64	0.839624
8922	3R_DroMel_CAF1	23,934,214 – 23,934,316	- - - - - - - - -	14308	23,934,214 – 23,934,316	+	6	120	81.85	-2.22	0.62	0.736122
8923	3R_DroMel_CAF1	23,936,450 – 23,936,544	- - - - - - - - -	14309	23,936,450 – 23,936,544	-	6	120	82.45	-1.45	0.76	0.589858
8924	3R_DroMel_CAF1	23,936,832 – 23,936,925	- - - - - - - - -	14310	23,936,832 – 23,936,925	-	5	96	77.01	-3.29	0.66	0.999565
8925	3R_DroMel_CAF1	23,939,552 – 23,939,660	- - - - - - - - -	14311	23,939,552 – 23,939,660	-	6	120	83.18	-1.64	0.71	0.544611
8926	3R_DroMel_CAF1	23,939,844 – 23,939,934	- - - - - - - - -	14312	23,939,844 – 23,939,934	-	6	96	82.53	-1.96	0.67	0.657157
8927	3R_DroMel_CAF1	23,942,191 – 23,942,315	- - - - - - - - -	14313	23,942,191 – 23,942,281	+	6	120	80.96	-2.23	0.62	0.812998
8927	3R_DroMel_CAF1	23,942,191 – 23,942,315	- - - - - - - - -	14314	23,942,216 – 23,942,315	+	6	118	80.54	-1.46	0.62	0.500000
8928	3R_DroMel_CAF1	23,943,240 – 23,943,338	- - - - - - - - -	14315	23,943,240 – 23,943,338	+	6	109	79.85	-1.79	0.61	0.725582
8928	3R_DroMel_CAF1	23,943,240 – 23,943,338	- - - - - - - - -	14316	23,943,240 – 23,943,338	-	6	109	79.85	-1.33	0.78	0.736254
8929	3R_DroMel_CAF1	23,947,479 – 23,947,580	- - - - - - - - -	14317	23,947,479 – 23,947,580	-	4	120	68.94	-1.83	0.48	0.702600
8930	3R_DroMel_CAF1	23,949,836 – 23,949,927	- - - - - - - - -	14318	23,949,836 – 23,949,927	-	5	118	72.07	-2.01	0.16	0.930176
8931	3R_DroMel_CAF1	23,950,247 – 23,950,340	- - - - - - - - -	14319	23,950,247 – 23,950,340	+	5	96	82.57	-2.28	0.72	0.938034
8932	3R_DroMel_CAF1	23,952,528 – 23,952,640	- - - - - - - - -	14320	23,952,528 – 23,952,621	+	6	109	86.54	-1.84	0.84	0.718367
8932	3R_DroMel_CAF1	23,952,528 – 23,952,640	- - - - - - - - -	14321	23,952,548 – 23,952,640	+	6	116	76.83	-2.32	0.67	0.980495
8933	3R_DroMel_CAF1	23,954,684 – 23,954,776	- - - - - - - - -	14322	23,954,684 – 23,954,776	+	6	97	77.58	-2.64	0.53	0.973531
8934	3R_DroMel_CAF1	23,967,425 – 23,967,530	- - - - - - - - -	14323	23,967,425 – 23,967,530	+	4	119	85.42	-1.53	0.68	0.540975
8935	3R_DroMel_CAF1	23,972,893 – 23,972,988	- - - - - - - - -	14324	23,972,893 – 23,972,988	+	6	118	81.10	-1.63	0.69	0.703410
8935	3R_DroMel_CAF1	23,972,893 – 23,972,988	- - - - - - - - -	14325	23,972,893 – 23,972,988	-	6	118	81.10	-2.32	0.50	0.543682
8936	3R_DroMel_CAF1	23,977,987 – 23,978,092	- - - - - - - - -	14326	23,977,987 – 23,978,092	-	6	109	93.61	-2.73	0.79	0.717104
8937	3R_DroMel_CAF1	23,978,216 – 23,978,336	- - - - - - - - -	14327	23,978,216 – 23,978,336	+	6	120	95.99	-1.51	0.86	0.614003
8938	3R_DroMel_CAF1	23,980,759 – 23,980,880	- - - - - - - - -	14328	23,980,759 – 23,980,859	+	6	120	78.73	-1.50	0.81	0.873915
				14329	23,980,759 – 23,980,859	-	6	120	78.73	-2.04	0.65	0.920153
				14330	23,980,779 – 23,980,880	+	6	107	83.77	-1.54	0.83	0.617763
				14331	23,980,779 – 23,980,880	-	6	107	83.77	-1.53	0.80	0.563474
8939	3R_DroMel_CAF1	23,982,979 – 23,983,089	- - - - - - - - -	14332	23,982,979 – 23,983,089	+	6	116	93.93	-0.87	1.01	0.880600
8940	3R_DroMel_CAF1	23,983,414 – 23,983,506	- - - - - - - - -	14333	23,983,414 – 23,983,506	+	4	92	93.30	-2.08	0.86	0.904979
8941	3R_DroMel_CAF1	23,983,783 – 23,983,874	- - - - - - - - -	14334	23,983,783 – 23,983,874	+	4	101	70.52	-1.62	0.56	0.724250
8942	3R_DroMel_CAF1	23,985,154 – 23,985,244	- - - - - - - - -	14335	23,985,154 – 23,985,244	-	6	114	74.58	-1.62	0.57	0.774029
8943	3R_DroMel_CAF1	23,985,764 – 23,985,855	- - - - - - - - -	14336	23,985,764 – 23,985,855	-	6	96	83.50	-1.75	0.81	0.703265
8944	3R_DroMel_CAF1	23,987,356 – 23,987,449	- - - - - - - - -	14337	23,987,356 – 23,987,449	-	6	111	75.14	-2.55	0.53	0.989075
8945	3R_DroMel_CAF1	23,989,315 – 23,989,419	- - - - - - - - -	14338	23,989,315 – 23,989,419	-	5	105	79.73	-2.16	0.72	0.955007
8946	3R_DroMel_CAF1	23,989,565 – 23,989,656	- - - - - - - - -	14339	23,989,565 – 23,989,656	+	6	99	78.79	-1.73	0.69	0.874022
8947	3R_DroMel_CAF1	23,993,509 – 23,993,599	- - - - - - - - -	14340	23,993,509 – 23,993,599	-	6	92	86.08	-2.29	0.77	0.613366
8948	3R_DroMel_CAF1	23,993,672 – 23,993,772	- - - - - - - - -	14341	23,993,672 – 23,993,772	+	6	106	78.65	-0.92	0.74	0.509966
8948	3R_DroMel_CAF1	23,993,672 – 23,993,772	- - - - - - - - -	14342	23,993,672 – 23,993,772	-	6	106	78.65	-1.41	0.80	0.847369
8949	3R_DroMel_CAF1	23,995,353 – 23,995,484	- - - - - - - - -	14343	23,995,353 – 23,995,448	+	4	119	85.05	-2.18	0.73	0.904235
8949	3R_DroMel_CAF1	23,995,353 – 23,995,484	- - - - - - - - -	14344	23,995,392 – 23,995,484	+	3	92	97.10	-1.68	1.01	0.809266
8950	3R_DroMel_CAF1	23,995,962 – 23,996,058	- - - - - - - - -	14345	23,995,962 – 23,996,058	-	6	110	80.99	-1.72	0.64	0.649321
8951	3R_DroMel_CAF1	23,997,242 – 23,997,340	- - - - - - - - -	14346	23,997,242 – 23,997,340	+	6	120	72.21	-2.29	0.47	0.978461
8951	3R_DroMel_CAF1	23,997,242 – 23,997,340	- - - - - - - - -	14347	23,997,242 – 23,997,340	-	6	120	72.21	-2.42	0.50	0.990646
8952	3R_DroMel_CAF1	24,010,027 – 24,010,124	- - - - - - - - -	14348	24,010,027 – 24,010,124	+	5	114	70.81	-2.87	0.36	0.999282
8952	3R_DroMel_CAF1	24,010,027 – 24,010,124	- - - - - - - - -	14349	24,010,027 – 24,010,124	-	5	114	70.81	-1.86	0.39	0.797878
8953	3R_DroMel_CAF1	24,013,571 – 24,013,669	- - - - - - - - -	14350	24,013,571 – 24,013,669	+	4	98	77.55	-2.46	0.47	0.667530
8953	3R_DroMel_CAF1	24,013,571 – 24,013,669	- - - - - - - - -	14351	24,013,571 – 24,013,669	-	4	98	77.55	-2.46	0.63	0.988330
8954	3R_DroMel_CAF1	24,014,406 – 24,014,513	- - - - - - - - -	14352	24,014,406 – 24,014,513	+	6	108	89.27	-1.48	0.88	0.665916
8955	3R_DroMel_CAF1	24,019,159 – 24,019,328	- - - - - - - - -	14353	24,019,159 – 24,019,254	+	4	101	88.95	-1.66	0.93	0.869975
				14354	24,019,194 – 24,019,288	-	4	100	87.80	-1.49	0.80	0.608594
				14355	24,019,227 – 24,019,328	+	5	109	78.71	-1.85	0.57	0.670098
				14356	24,019,227 – 24,019,328	-	5	109	78.71	-1.59	0.63	0.510923
8956	3R_DroMel_CAF1	24,022,611 – 24,022,712	- - - - - - - - -	14357	24,022,611 – 24,022,712	-	6	119	74.28	-1.69	0.49	0.524555
8957	3R_DroMel_CAF1	24,030,886 – 24,031,026	- - - - - - - - -	14358	24,030,886 – 24,030,996	+	5	115	72.29	-1.67	0.27	0.575759
				14359	24,030,922 – 24,031,026	+	5	109	78.69	-2.19	0.43	0.822981
				14360	24,030,922 – 24,031,026	-	5	109	78.69	-2.56	0.62	0.988496
8958	3R_DroMel_CAF1	24,031,191 – 24,031,286	- - - - - - - - -	14361	24,031,191 – 24,031,286	+	6	109	81.18	-1.37	0.66	0.515404
8959	3R_DroMel_CAF1	24,031,665 – 24,031,768	- - - - - - - - -	14362	24,031,665 – 24,031,768	+	6	120	83.79	-1.93	0.69	0.537358
8960	3R_DroMel_CAF1	24,040,336 – 24,040,431	- - - - - - - - -	14363	24,040,336 – 24,040,431	-	6	108	83.59	-2.11	0.71	0.642542
8961	3R_DroMel_CAF1	24,046,407 – 24,046,516	- - - - - - - - -	14364	24,046,407 – 24,046,516	-	6	117	85.44	-1.81	0.85	0.746335
8962	3R_DroMel_CAF1	24,047,455 – 24,047,549	- - - - - - - - -	14365	24,047,455 – 24,047,549	-	5	99	73.43	-1.92	0.08	0.919918
8963	3R_DroMel_CAF1	24,047,620 – 24,047,782	- - - - - - - - -	14366	24,047,620 – 24,047,711	+	6	120	86.41	-1.48	0.87	0.571899
				14367	24,047,620 – 24,047,711	-	6	120	86.41	-2.63	0.87	0.965958
				14368	24,047,632 – 24,047,751	-	6	120	96.66	-1.90	0.88	0.938948
				14369	24,047,672 – 24,047,782	+	6	120	76.70	-1.64	0.53	0.500000
8964	3R_DroMel_CAF1	24,054,453 – 24,054,544	- - - - - - - - -	14370	24,054,453 – 24,054,544	-	6	91	93.11	-1.39	0.86	0.500000
8965	3R_DroMel_CAF1	24,060,176 – 24,060,284	- - - - - - - - -	14371	24,060,176 – 24,060,284	+	6	118	76.39	-0.92	0.77	0.704287
8966	3R_DroMel_CAF1	24,060,688 – 24,060,779	- - - - - - - - -	14372	24,060,688 – 24,060,779	-	6	93	86.40	-1.50	0.85	0.527854
8967	3R_DroMel_CAF1	24,061,325 – 24,061,426	- - - - - - - - -	14373	24,061,325 – 24,061,426	-	4	101	87.29	-1.50	0.72	0.558694
8968	3R_DroMel_CAF1	24,062,701 – 24,062,798	- - - - - - - - -	14374	24,062,701 – 24,062,798	+	6	109	74.45	-1.84	0.77	0.981985
8969	3R_DroMel_CAF1	24,062,917 – 24,063,029	- - - "knownCDS=Parent=FBtr0085274;Name=CG4787-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4787-RA" - - - - -	14375	24,062,917 – 24,063,029	-	6	117	79.30	-1.69	0.63	0.738972
8970	3R_DroMel_CAF1	24,063,198 – 24,063,342	- - - - - - - - -	14376	24,063,198 – 24,063,303	-	6	108	76.47	-1.93	0.62	0.933770
8970	3R_DroMel_CAF1	24,063,198 – 24,063,342	- - - - - - - - -	14377	24,063,223 – 24,063,342	-	6	119	79.22	-2.08	0.54	0.757176
8971	3R_DroMel_CAF1	24,066,120 – 24,066,212	- - - - - - - - -	14378	24,066,120 – 24,066,212	+	6	97	93.59	-1.97	0.90	0.980650
8971	3R_DroMel_CAF1	24,066,120 – 24,066,212	- - - - - - - - -	14379	24,066,120 – 24,066,212	-	6	97	93.59	-2.50	0.81	0.772474
8972	3R_DroMel_CAF1	24,066,793 – 24,066,902	- - - - - - - - -	14380	24,066,793 – 24,066,902	-	5	109	93.58	-1.53	0.88	0.930498
8973	3R_DroMel_CAF1	24,070,587 – 24,070,696	- - - - - - - - -	14381	24,070,587 – 24,070,696	+	3	109	95.11	-4.33	0.95	0.983713
8973	3R_DroMel_CAF1	24,070,587 – 24,070,696	- - - - - - - - -	14382	24,070,587 – 24,070,696	-	3	109	95.11	-2.08	0.91	0.799341
8974	3R_DroMel_CAF1	24,075,162 – 24,075,309	- - - - - - - - -	14383	24,075,162 – 24,075,275	+	4	119	92.67	-2.39	0.77	0.783745
8974	3R_DroMel_CAF1	24,075,162 – 24,075,309	- - - - - - - - -	14384	24,075,196 – 24,075,309	+	4	113	95.28	-2.96	0.81	0.842283
8975	3R_DroMel_CAF1	24,075,885 – 24,075,986	- - - - - - - - -	14385	24,075,885 – 24,075,986	-	4	101	80.59	-2.34	0.84	0.987116
8976	3R_DroMel_CAF1	24,077,100 – 24,077,206	- - - - - - - - -	14386	24,077,100 – 24,077,206	+	4	106	72.20	-1.54	0.64	0.758673
8977	3R_DroMel_CAF1	24,084,247 – 24,084,381	- - - - - - - - -	14387	24,084,247 – 24,084,345	-	6	116	80.67	-2.74	0.45	0.713445
8977	3R_DroMel_CAF1	24,084,247 – 24,084,381	- - - - - - - - -	14388	24,084,284 – 24,084,381	+	6	116	79.15	-2.08	0.58	0.830934
8978	3R_DroMel_CAF1	24,086,616 – 24,086,719	- - - - - - - - -	14389	24,086,616 – 24,086,719	+	5	107	77.34	-1.66	0.60	0.600639
8978	3R_DroMel_CAF1	24,086,616 – 24,086,719	- - - - - - - - -	14390	24,086,616 – 24,086,719	-	5	107	77.34	-1.70	0.55	0.500000
8979	3R_DroMel_CAF1	24,086,897 – 24,086,987	- - - - - - - - -	14391	24,086,897 – 24,086,987	-	6	93	81.32	-2.47	0.58	0.794331
8980	3R_DroMel_CAF1	24,093,295 – 24,093,431	- - - - - - - - -	14392	24,093,295 – 24,093,397	+	5	109	81.90	-1.87	0.78	0.848488
				14393	24,093,295 – 24,093,397	-	5	109	81.90	-1.80	0.68	0.702472
				14394	24,093,324 – 24,093,431	-	6	114	74.42	-1.73	0.49	0.580272
8981	3R_DroMel_CAF1	24,093,687 – 24,093,777	- - - - - - - - -	14395	24,093,687 – 24,093,777	-	6	91	93.43	-2.27	0.81	0.709546
8982	3R_DroMel_CAF1	24,094,277 – 24,094,448	- - - - - - - - -	14396	24,094,277 – 24,094,381	-	6	118	81.41	-2.47	0.65	0.864658
				14397	24,094,306 – 24,094,409	+	6	118	79.87	-2.55	0.50	0.842715
				14398	24,094,306 – 24,094,409	-	6	118	79.87	-3.32	0.52	0.971634
				14399	24,094,342 – 24,094,448	-	6	117	86.36	-3.07	0.72	0.650518
8983	3R_DroMel_CAF1	24,095,310 – 24,095,470	- - - - - - - - -	14400	24,095,310 – 24,095,408	+	5	103	79.39	-2.92	0.82	0.997623
				14401	24,095,310 – 24,095,408	-	5	103	79.39	-2.76	0.74	0.995847
				14402	24,095,376 – 24,095,470	-	6	102	85.79	-2.90	0.69	0.547053
8984	3R_DroMel_CAF1	24,096,945 – 24,097,046	- - - - - - - - -	14403	24,096,945 – 24,097,046	+	6	120	69.10	-2.03	0.50	0.967284
8985	3R_DroMel_CAF1	24,097,233 – 24,097,326	- - - - - - - - -	14404	24,097,233 – 24,097,326	+	6	93	81.62	-1.57	0.83	0.753444
8985	3R_DroMel_CAF1	24,097,233 – 24,097,326	- - - - - - - - -	14405	24,097,233 – 24,097,326	-	6	93	81.62	-1.32	0.77	0.595186
8986	3R_DroMel_CAF1	24,099,452 – 24,099,543	- - - - - - - - -	14406	24,099,452 – 24,099,543	-	5	105	84.61	-2.05	0.74	0.854592
8987	3R_DroMel_CAF1	24,099,567 – 24,099,660	- - - - - - - - -	14407	24,099,567 – 24,099,660	-	5	94	96.58	-1.47	1.01	0.980058
8988	3R_DroMel_CAF1	24,099,804 – 24,099,911	- - - - - - - - -	14408	24,099,804 – 24,099,911	+	6	119	88.71	-1.66	0.83	0.519377
8988	3R_DroMel_CAF1	24,099,804 – 24,099,911	- - - - - - - - -	14409	24,099,804 – 24,099,911	-	6	119	88.71	-2.76	0.78	0.701913
8989	3R_DroMel_CAF1	24,100,453 – 24,100,544	- - - "knownCDS=texon4174;Parent=CG_RGUI_GID_mRNA_40009732, CG_DGIL_SNO_28367899" - - - - -	14410	24,100,453 – 24,100,544	+	5	94	87.20	-2.36	0.62	0.500000
8990	3R_DroMel_CAF1	24,102,425 – 24,102,552	- - - - - - - - -	14411	24,102,425 – 24,102,521	+	6	98	84.56	-3.32	0.73	0.857538
				14412	24,102,454 – 24,102,552	+	5	103	87.72	-4.65	0.78	0.998916
				14413	24,102,454 – 24,102,552	-	5	103	87.72	-2.49	0.69	0.827840
8991	3R_DroMel_CAF1	24,103,425 – 24,103,515	- - - - - - - - -	14414	24,103,425 – 24,103,515	+	6	94	81.13	-1.72	0.64	0.646476
8992	3R_DroMel_CAF1	24,107,333 – 24,107,436	- - - - - - - - -	14415	24,107,333 – 24,107,436	+	5	103	87.99	-2.15	0.71	0.785971
8993	3R_DroMel_CAF1	24,110,507 – 24,110,607	- - - - - - - - -	14416	24,110,507 – 24,110,607	-	6	116	75.49	-2.83	0.28	0.892321
8994	3R_DroMel_CAF1	24,110,720 – 24,110,827	- - - - - - - - -	14417	24,110,720 – 24,110,827	-	6	110	80.84	-1.89	0.68	0.807205
8995	3R_DroMel_CAF1	24,112,699 – 24,112,790	- - - - - - - - -	14418	24,112,699 – 24,112,790	+	5	91	92.75	-1.80	0.79	0.829347
8996	3R_DroMel_CAF1	24,114,807 – 24,114,913	- - - - - - - - -	14419	24,114,807 – 24,114,913	+	6	120	79.50	-2.07	0.53	0.678895
8997	3R_DroMel_CAF1	24,115,509 – 24,115,607	- - - - - - - - -	14420	24,115,509 – 24,115,607	-	6	103	83.95	-2.91	0.71	0.790850
8998	3R_DroMel_CAF1	24,116,685 – 24,116,776	- - - - - - - - -	14421	24,116,685 – 24,116,776	+	6	105	80.81	-1.35	0.70	0.602785
8999	3R_DroMel_CAF1	24,117,861 – 24,118,055	- - - "knownCDS=Parent=FBtr0085277;Name=Mst98Ca-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11719-RA" - - - - -	14422	24,117,861 – 24,117,958	-	6	104	83.49	-1.98	0.74	0.672496
8999	3R_DroMel_CAF1	24,117,861 – 24,118,055		14423	24,117,958 – 24,118,055	-	6	97	90.65	-1.86	0.85	0.767793
9000	3R_DroMel_CAF1	24,119,410 – 24,119,512	- - - - - - - - -	14424	24,119,410 – 24,119,512	-	6	103	78.85	-1.84	0.64	0.852562
9001	3R_DroMel_CAF1	24,121,148 – 24,121,241	- - - - - - - - -	14425	24,121,148 – 24,121,241	+	6	103	80.07	-2.93	0.59	0.954671
9001	3R_DroMel_CAF1	24,121,148 – 24,121,241	- - - - - - - - -	14426	24,121,148 – 24,121,241	-	6	103	80.07	-2.85	0.55	0.936449
9002	3R_DroMel_CAF1	24,128,567 – 24,128,669	- - - - - - - - -	14427	24,128,567 – 24,128,669	-	5	105	92.73	-1.45	0.90	0.918124
9003	3R_DroMel_CAF1	24,129,257 – 24,129,356	- - - - - - - - -	14428	24,129,257 – 24,129,356	-	6	117	64.58	-2.37	0.23	0.771411
9004	3R_DroMel_CAF1	24,131,665 – 24,131,761	- - - - - - - - -	14429	24,131,665 – 24,131,761	-	6	112	80.13	-2.07	0.61	0.821413
9005	3R_DroMel_CAF1	24,133,160 – 24,133,261	- - - - - - - - -	14430	24,133,160 – 24,133,261	-	4	102	90.48	-3.43	0.74	0.912447
9006	3R_DroMel_CAF1	24,139,088 – 24,139,180	- - - - - - - - -	14431	24,139,088 – 24,139,180	-	6	119	85.61	-1.23	0.95	0.602485
9007	3R_DroMel_CAF1	24,140,097 – 24,140,198	- - - - - - - - -	14432	24,140,097 – 24,140,198	+	6	109	80.12	-1.06	0.87	0.541211
9008	3R_DroMel_CAF1	24,149,414 – 24,149,525	- - - "knownCDS=Parent=FBtr0089681;Name=larp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14066-RC" - - - - -	14433	24,149,414 – 24,149,525	-	6	120	81.71	-2.41	0.66	0.841877
9009	3R_DroMel_CAF1	24,151,085 – 24,151,177	- - - - - - - - -	14434	24,151,085 – 24,151,177	-	3	120	79.10	-1.15	0.85	0.709032
9010	3R_DroMel_CAF1	24,153,421 – 24,153,524	- - - - - - - - -	14435	24,153,421 – 24,153,524	+	4	106	74.76	-1.57	0.62	0.527685
9011	3R_DroMel_CAF1	24,156,548 – 24,156,647	- - - - - - - - -	14436	24,156,548 – 24,156,647	+	3	104	81.61	-2.42	0.71	0.948888
9011	3R_DroMel_CAF1	24,156,548 – 24,156,647	- - - - - - - - -	14437	24,156,548 – 24,156,647	-	3	104	81.61	-1.55	0.73	0.554859
9012	3R_DroMel_CAF1	24,157,693 – 24,157,808	- - - - - - - - -	14438	24,157,693 – 24,157,808	+	4	119	91.71	-1.86	0.83	0.817371
9013	3R_DroMel_CAF1	24,160,124 – 24,160,232	- - - "knownCDS=Parent=FBtr0085280;Name=CG14065-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14065-RA" - - - - -	14439	24,160,124 – 24,160,232	-	6	116	69.57	-2.13	0.31	0.821614
9014	3R_DroMel_CAF1	24,160,812 – 24,160,945	- - - - - - - - -	14440	24,160,812 – 24,160,925	+	3	114	90.94	-2.56	0.92	0.965995
				14441	24,160,852 – 24,160,945	+	3	94	89.57	-4.46	0.96	0.986743
				14442	24,160,852 – 24,160,945	-	3	94	89.57	-3.24	0.86	0.963539
9015	3R_DroMel_CAF1	24,163,570 – 24,163,703	- - - "knownCDS=Parent=FBtr0085297;Name=Gfat2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1345-RA" - - - - -	14443	24,163,570 – 24,163,663	-	5	120	78.61	-1.62	0.86	0.904757
9015	3R_DroMel_CAF1	24,163,570 – 24,163,703		14444	24,163,587 – 24,163,703	-	5	120	89.46	-1.62	0.79	0.718808
9016	3R_DroMel_CAF1	24,164,263 – 24,164,423	- - - "knownCDS=Parent=FBtr0085297;Name=Gfat2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1345-RA" - - - - -	14445	24,164,263 – 24,164,383	-	5	120	93.33	-1.91	0.89	0.993579
9016	3R_DroMel_CAF1	24,164,263 – 24,164,423		14446	24,164,303 – 24,164,423	-	5	120	91.08	-1.94	0.81	0.940743
9017	3R_DroMel_CAF1	24,164,463 – 24,164,583	- - - "knownCDS=Parent=FBtr0085297;Name=Gfat2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1345-RA" - - - - -	14447	24,164,463 – 24,164,583	+	4	120	87.78	-1.56	0.75	0.615228
9018	3R_DroMel_CAF1	24,165,190 – 24,165,281	- - - "knownCDS=Parent=FBtr0085297;Name=Gfat2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1345-RA" - - - - -	14448	24,165,190 – 24,165,281	-	4	91	86.45	-1.77	0.90	0.884749
9019	3R_DroMel_CAF1	24,165,327 – 24,165,418	- - - - - - - - -	14449	24,165,327 – 24,165,418	+	3	91	91.94	-2.26	0.90	0.880345
9020	3R_DroMel_CAF1	24,169,782 – 24,169,878	- - - "knownCDS=Parent=FBtr0085287;Name=Moca-cyp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1866-RB" - - - - -	14450	24,169,782 – 24,169,878	-	4	107	72.16	-1.59	0.62	0.743982
9021	3R_DroMel_CAF1	24,171,805 – 24,171,935	- - - - - - - - -	14451	24,171,805 – 24,171,895	+	5	90	86.93	-2.94	0.72	0.969959
				14452	24,171,805 – 24,171,895	-	5	90	86.93	-1.91	0.75	0.779854
				14453	24,171,821 – 24,171,935	+	5	114	76.54	-2.46	0.50	0.986736
				14454	24,171,821 – 24,171,935	-	5	114	76.54	-1.97	0.45	0.768978
9022	3R_DroMel_CAF1	24,172,197 – 24,172,293	- - - - - - - - -	14455	24,172,197 – 24,172,293	+	5	99	95.68	-1.47	0.83	0.636290
9023	3R_DroMel_CAF1	24,172,464 – 24,172,579	- - - - - - - - -	14456	24,172,464 – 24,172,579	-	5	120	82.87	-2.53	0.57	0.855099
9024	3R_DroMel_CAF1	24,173,899 – 24,174,013	- - - - - - - - -	14457	24,173,899 – 24,174,013	+	5	120	91.45	-2.23	0.72	0.722324
9025	3R_DroMel_CAF1	24,174,420 – 24,174,524	- - - - - - - - -	14458	24,174,420 – 24,174,524	+	5	106	83.49	-2.50	0.66	0.928959
9026	3R_DroMel_CAF1	24,174,601 – 24,174,709	- - - - - - - - -	14459	24,174,601 – 24,174,709	+	5	113	91.27	-1.93	0.84	0.967483
9027	3R_DroMel_CAF1	24,175,865 – 24,175,974	- - - - - - - - -	14460	24,175,865 – 24,175,974	-	5	120	89.39	-1.83	0.78	0.836397
9028	3R_DroMel_CAF1	24,176,539 – 24,176,642	- - - - - - - - -	14461	24,176,539 – 24,176,642	+	3	103	94.82	-1.62	0.93	0.564004
9028	3R_DroMel_CAF1	24,176,539 – 24,176,642	- - - - - - - - -	14462	24,176,539 – 24,176,642	-	3	103	94.82	-2.76	0.85	0.864349
9029	3R_DroMel_CAF1	24,179,416 – 24,179,527	- - - - - - - - -	14463	24,179,416 – 24,179,527	+	6	120	85.22	-2.90	0.66	0.526618
9029	3R_DroMel_CAF1	24,179,416 – 24,179,527	- - - - - - - - -	14464	24,179,416 – 24,179,527	-	6	120	85.22	-3.60	0.68	0.783385
9030	3R_DroMel_CAF1	24,180,372 – 24,180,467	- - - - - - - - -	14465	24,180,372 – 24,180,467	-	6	120	73.80	-1.21	0.70	0.843395
9031	3R_DroMel_CAF1	24,181,093 – 24,181,205	- - - - - - - - -	14466	24,181,093 – 24,181,205	+	5	117	72.98	-1.74	0.11	0.833283
9031	3R_DroMel_CAF1	24,181,093 – 24,181,205	- - - - - - - - -	14467	24,181,093 – 24,181,205	-	5	117	72.98	-2.06	0.34	0.934834
9032	3R_DroMel_CAF1	24,181,295 – 24,181,397	- - - - - - - - -	14468	24,181,295 – 24,181,397	+	6	120	78.96	-2.60	0.52	0.931967
9033	3R_DroMel_CAF1	24,181,599 – 24,181,708	- - - - - - - - -	14469	24,181,599 – 24,181,708	+	6	120	77.98	-1.19	0.76	0.766849
9034	3R_DroMel_CAF1	24,181,782 – 24,181,884	- - - - - - - - -	14470	24,181,782 – 24,181,884	-	5	104	90.17	-1.53	0.80	0.694102
9035	3R_DroMel_CAF1	24,182,873 – 24,183,075	- - - - - - - - -	14471	24,182,873 – 24,182,979	+	6	116	81.03	-1.73	0.79	0.826627
				14472	24,182,979 – 24,183,075	+	5	107	78.49	-2.50	0.55	0.978164
				14473	24,182,979 – 24,183,075	-	5	107	78.49	-1.90	0.54	0.689624
9036	3R_DroMel_CAF1	24,184,428 – 24,184,533	- - - - - - - - -	14474	24,184,428 – 24,184,533	+	6	113	83.16	-2.29	0.76	0.811690
9037	3R_DroMel_CAF1	24,185,032 – 24,185,132	- - - - - - - - -	14475	24,185,032 – 24,185,132	-	6	120	77.21	-1.99	0.55	0.846304
9038	3R_DroMel_CAF1	24,186,089 – 24,186,195	- - - - - - - - -	14476	24,186,089 – 24,186,195	+	5	117	82.38	-2.18	0.61	0.801027
9039	3R_DroMel_CAF1	24,186,380 – 24,186,493	- - - - - - - - -	14477	24,186,380 – 24,186,493	-	6	120	79.46	-1.32	0.68	0.630644
9040	3R_DroMel_CAF1	24,188,571 – 24,188,683	- - - - - - - - -	14478	24,188,571 – 24,188,683	-	6	120	80.29	-1.98	0.54	0.559273
9041	3R_DroMel_CAF1	24,190,187 – 24,190,307	- - - - - - - - -	14479	24,190,187 – 24,190,307	+	6	120	99.00	-0.89	0.98	0.841508
9041	3R_DroMel_CAF1	24,190,187 – 24,190,307	- - - - - - - - -	14480	24,190,187 – 24,190,307	-	6	120	99.00	-1.38	0.96	0.975691
9042	3R_DroMel_CAF1	24,190,486 – 24,190,587	- - - - - - - - -	14481	24,190,486 – 24,190,587	+	6	120	75.52	-1.89	0.51	0.781286
9042	3R_DroMel_CAF1	24,190,486 – 24,190,587	- - - - - - - - -	14482	24,190,486 – 24,190,587	-	6	120	75.52	-1.85	0.51	0.744143
9043	3R_DroMel_CAF1	24,193,220 – 24,193,325	- - - - - - - - -	14483	24,193,220 – 24,193,325	+	6	120	83.40	-2.98	0.54	0.592020
9043	3R_DroMel_CAF1	24,193,220 – 24,193,325	- - - - - - - - -	14484	24,193,220 – 24,193,325	-	6	120	83.40	-2.28	0.71	0.710473
9044	3R_DroMel_CAF1	24,193,977 – 24,194,117	- - - - - - - - -	14485	24,193,977 – 24,194,081	-	6	120	76.33	-2.11	0.54	0.921857
9044	3R_DroMel_CAF1	24,193,977 – 24,194,117	- - - - - - - - -	14486	24,194,017 – 24,194,117	-	6	116	80.65	-1.55	0.62	0.550757
9045	3R_DroMel_CAF1	24,194,397 – 24,194,504	- - - - - - - - -	14487	24,194,397 – 24,194,504	+	6	119	77.01	-2.98	0.47	0.987824
9045	3R_DroMel_CAF1	24,194,397 – 24,194,504	- - - - - - - - -	14488	24,194,397 – 24,194,504	-	6	119	77.01	-2.25	0.42	0.704090
9046	3R_DroMel_CAF1	24,195,096 – 24,195,203	- - - - - - - - -	14489	24,195,096 – 24,195,203	-	6	120	77.02	-2.49	0.52	0.964408
9047	3R_DroMel_CAF1	24,197,161 – 24,197,254	- - - - - - - - -	14490	24,197,161 – 24,197,254	+	5	99	87.62	-2.29	0.73	0.881300
9048	3R_DroMel_CAF1	24,199,109 – 24,199,228	- - - - - - - - -	14491	24,199,109 – 24,199,228	-	5	120	72.50	-1.58	0.04	0.717432
9049	3R_DroMel_CAF1	24,202,490 – 24,202,597	- - - - - - - - -	14492	24,202,490 – 24,202,597	-	6	120	81.82	-1.67	0.68	0.649552
9050	3R_DroMel_CAF1	24,203,629 – 24,203,852	- - - - - - - - -	14493	24,203,629 – 24,203,738	+	5	109	87.36	-2.69	0.82	0.995175
9050	3R_DroMel_CAF1	24,203,629 – 24,203,852	- - - - - - - - -	14494	24,203,738 – 24,203,852	+	6	120	78.85	-1.57	0.66	0.778563
9051	3R_DroMel_CAF1	24,204,579 – 24,204,691	- - - - - - - - -	14495	24,204,579 – 24,204,691	-	6	120	77.06	-2.21	0.60	0.958290
9052	3R_DroMel_CAF1	24,205,722 – 24,205,817	- - - - - - - - -	14496	24,205,722 – 24,205,817	+	6	120	79.22	-1.83	0.57	0.653730
9052	3R_DroMel_CAF1	24,205,722 – 24,205,817	- - - - - - - - -	14497	24,205,722 – 24,205,817	-	6	120	79.22	-1.74	0.63	0.786230
9053	3R_DroMel_CAF1	24,206,827 – 24,206,920	- - - - - - - - -	14498	24,206,827 – 24,206,920	-	6	109	77.22	-1.81	0.56	0.766833
9054	3R_DroMel_CAF1	24,207,984 – 24,208,152	- - - - - - - - -	14499	24,207,984 – 24,208,075	-	6	120	80.11	-2.50	0.42	0.500000
9054	3R_DroMel_CAF1	24,207,984 – 24,208,152	- - - - - - - - -	14500	24,208,035 – 24,208,152	-	6	118	80.72	-2.62	0.63	0.915432
9055	3R_DroMel_CAF1	24,208,235 – 24,208,342	- - - - - - - - -	14501	24,208,235 – 24,208,342	-	6	120	76.64	-2.48	0.40	0.872414
9056	3R_DroMel_CAF1	24,209,266 – 24,209,367	- - - - - - - - -	14502	24,209,266 – 24,209,367	+	6	109	79.56	-1.07	0.76	0.581347
9057	3R_DroMel_CAF1	24,211,790 – 24,211,903	- - - - - - - - -	14503	24,211,790 – 24,211,903	-	6	120	77.84	-1.78	0.64	0.881275
9058	3R_DroMel_CAF1	24,212,299 – 24,212,403	- - - - - - - - -	14504	24,212,299 – 24,212,403	+	4	107	92.10	-1.64	0.82	0.641848
9059	3R_DroMel_CAF1	24,214,137 – 24,214,233	- - - - - - - - -	14505	24,214,137 – 24,214,233	-	6	110	82.47	-1.69	0.69	0.611327
9060	3R_DroMel_CAF1	24,214,484 – 24,214,654	- - - - - - - - -	14506	24,214,484 – 24,214,580	+	5	108	77.04	-2.25	0.23	0.952932
				14507	24,214,522 – 24,214,618	+	5	108	70.55	-2.55	0.14	0.984673
				14508	24,214,556 – 24,214,654	+	5	113	71.29	-1.90	0.22	0.847378
9061	3R_DroMel_CAF1	24,214,956 – 24,215,070	- - - - - - - - -	14509	24,214,956 – 24,215,070	+	5	118	87.37	-2.09	0.67	0.595937
9062	3R_DroMel_CAF1	24,216,460 – 24,216,594	- - - - - - - - -	14510	24,216,460 – 24,216,567	+	6	120	76.82	-1.86	0.64	0.931656
9062	3R_DroMel_CAF1	24,216,460 – 24,216,594	- - - - - - - - -	14511	24,216,490 – 24,216,594	+	6	112	83.97	-2.59	0.76	0.811947
9063	3R_DroMel_CAF1	24,216,989 – 24,217,084	- - - - - - - - -	14512	24,216,989 – 24,217,084	-	6	120	78.40	-1.65	0.60	0.692662
9064	3R_DroMel_CAF1	24,218,432 – 24,218,569	- - - - - - - - -	14513	24,218,432 – 24,218,535	+	6	103	82.26	-2.94	0.69	0.895052
				14514	24,218,432 – 24,218,535	-	6	103	82.26	-2.22	0.70	0.798404
				14515	24,218,465 – 24,218,569	+	6	104	94.19	-1.90	0.88	0.954007
9065	3R_DroMel_CAF1	24,221,282 – 24,221,373	- - - - - - - - -	14516	24,221,282 – 24,221,373	+	5	108	89.46	-1.35	1.00	0.899592
9065	3R_DroMel_CAF1	24,221,282 – 24,221,373	- - - - - - - - -	14517	24,221,282 – 24,221,373	-	5	108	89.46	-1.49	0.84	0.739968
9066	3R_DroMel_CAF1	24,221,438 – 24,221,535	- - - - - - - - -	14518	24,221,438 – 24,221,535	-	6	120	74.27	-2.30	0.34	0.791014
9067	3R_DroMel_CAF1	24,222,138 – 24,222,273	- - - - - - - - -	14519	24,222,138 – 24,222,252	+	6	120	76.45	-2.13	0.42	0.630885
9067	3R_DroMel_CAF1	24,222,138 – 24,222,273	- - - - - - - - -	14520	24,222,178 – 24,222,273	+	6	111	81.04	-2.55	0.53	0.773868
9068	3R_DroMel_CAF1	24,223,333 – 24,223,431	- - - - - - - - -	14521	24,223,333 – 24,223,431	+	3	100	74.83	-0.94	0.80	0.586398
9069	3R_DroMel_CAF1	24,225,563 – 24,225,663	- - - - - - - - -	14522	24,225,563 – 24,225,663	+	6	109	76.70	-2.24	0.63	0.972650
9070	3R_DroMel_CAF1	24,228,285 – 24,228,386	- - - - - - - - -	14523	24,228,285 – 24,228,386	-	6	112	80.62	-1.24	0.78	0.630484
9071	3R_DroMel_CAF1	24,239,040 – 24,239,170	- - - - - - - - -	14524	24,239,040 – 24,239,138	-	6	113	78.11	-1.56	0.57	0.517768
9071	3R_DroMel_CAF1	24,239,040 – 24,239,170	- - - - - - - - -	14525	24,239,068 – 24,239,170	-	6	116	79.40	-1.63	0.59	0.570971
9072	3R_DroMel_CAF1	24,239,195 – 24,239,290	- - - - - - - - -	14526	24,239,195 – 24,239,290	+	6	119	77.17	-1.20	0.69	0.684457
9073	3R_DroMel_CAF1	24,239,460 – 24,239,550	- - - - - - - - -	14527	24,239,460 – 24,239,550	+	5	91	93.27	-3.22	0.88	0.999867
9073	3R_DroMel_CAF1	24,239,460 – 24,239,550	- - - - - - - - -	14528	24,239,460 – 24,239,550	-	5	91	93.27	-1.84	0.78	0.802633
9074	3R_DroMel_CAF1	24,239,590 – 24,239,709	- - - - - - - - -	14529	24,239,590 – 24,239,709	+	5	120	79.56	-1.96	0.47	0.535595
9074	3R_DroMel_CAF1	24,239,590 – 24,239,709	- - - - - - - - -	14530	24,239,590 – 24,239,709	-	5	120	79.56	-2.33	0.60	0.949031
9075	3R_DroMel_CAF1	24,241,799 – 24,241,891	- - - - - - - - -	14531	24,241,799 – 24,241,891	-	6	100	85.09	-3.14	0.80	0.924361
9076	3R_DroMel_CAF1	24,245,186 – 24,245,279	- - - - - - - - -	14532	24,245,186 – 24,245,279	+	6	105	81.07	-1.54	0.62	0.500000
9077	3R_DroMel_CAF1	24,245,918 – 24,246,012	- - - - - - - - -	14533	24,245,918 – 24,246,012	+	5	94	91.06	-1.74	0.79	0.817487
9078	3R_DroMel_CAF1	24,246,694 – 24,246,788	- - - - - - - - -	14534	24,246,694 – 24,246,788	+	4	94	90.43	-2.50	1.00	0.997509
9079	3R_DroMel_CAF1	24,248,710 – 24,248,804	- - - - - - - - -	14535	24,248,710 – 24,248,804	+	6	112	84.31	-1.74	0.87	0.779957
9080	3R_DroMel_CAF1	24,250,707 – 24,250,797	- - - - - - - - -	14536	24,250,707 – 24,250,797	+	5	90	97.78	-1.37	0.99	0.917684
9081	3R_DroMel_CAF1	24,250,837 – 24,250,952	- - - - - - - - -	14537	24,250,837 – 24,250,929	+	5	92	89.87	-1.59	0.88	0.901796
				14538	24,250,837 – 24,250,929	-	5	92	89.87	-2.71	0.89	0.999626
				14539	24,250,860 – 24,250,952	+	6	94	82.51	-1.77	0.79	0.749817
				14540	24,250,860 – 24,250,952	-	6	94	82.51	-2.55	0.88	0.958741
9082	3R_DroMel_CAF1	24,251,738 – 24,251,837	- - - - - - - - -	14541	24,251,738 – 24,251,837	+	5	105	85.39	-2.01	0.73	0.806810
9083	3R_DroMel_CAF1	24,253,544 – 24,253,693	- - - - - - - - -	14542	24,253,544 – 24,253,656	+	6	115	89.41	-2.56	0.77	0.561771
9083	3R_DroMel_CAF1	24,253,544 – 24,253,693	- - - - - - - - -	14543	24,253,579 – 24,253,693	+	6	119	88.84	-3.14	0.80	0.913702
9084	3R_DroMel_CAF1	24,254,393 – 24,254,485	- - - - - - - - -	14544	24,254,393 – 24,254,485	+	6	107	77.81	-1.77	0.57	0.714121
9085	3R_DroMel_CAF1	24,256,628 – 24,256,739	- - - - - - - - -	14545	24,256,628 – 24,256,739	-	5	112	95.15	-1.86	0.93	0.995890
9086	3R_DroMel_CAF1	24,259,158 – 24,259,263	- - - - - - - - -	14546	24,259,158 – 24,259,263	-	5	105	91.05	-2.14	0.74	0.799260
9087	3R_DroMel_CAF1	24,261,836 – 24,261,929	- - - - - - - - -	14547	24,261,836 – 24,261,929	+	6	96	95.11	-1.61	0.87	0.783024
9088	3R_DroMel_CAF1	24,264,188 – 24,264,286	- - - - - - - - -	14548	24,264,188 – 24,264,286	+	6	120	76.59	-1.78	0.59	0.844957
9089	3R_DroMel_CAF1	24,264,960 – 24,265,050	- - - - - - - - -	14549	24,264,960 – 24,265,050	+	6	98	89.06	-3.55	0.78	0.924753
9090	3R_DroMel_CAF1	24,266,928 – 24,267,031	- - - - - - - - -	14550	24,266,928 – 24,267,031	+	6	110	79.12	-1.67	0.59	0.611554
9090	3R_DroMel_CAF1	24,266,928 – 24,267,031	- - - - - - - - -	14551	24,266,928 – 24,267,031	-	6	110	79.12	-2.28	0.57	0.889067
9091	3R_DroMel_CAF1	24,267,072 – 24,267,178	- - - - - - - - -	14552	24,267,072 – 24,267,178	-	6	110	77.60	-2.85	0.44	0.965566
9092	3R_DroMel_CAF1	24,267,427 – 24,267,558	- - - - - - - - -	14553	24,267,427 – 24,267,530	+	6	105	82.89	-2.28	0.68	0.723884
9092	3R_DroMel_CAF1	24,267,427 – 24,267,558	- - - - - - - - -	14554	24,267,465 – 24,267,558	+	5	100	88.03	-2.16	0.72	0.791737
9093	3R_DroMel_CAF1	24,268,423 – 24,268,517	- - - - - - - - -	14555	24,268,423 – 24,268,517	-	6	107	85.34	-2.39	0.92	0.980716
9094	3R_DroMel_CAF1	24,269,966 – 24,270,062	- - - - - - - - -	14556	24,269,966 – 24,270,062	-	6	119	77.03	-2.14	0.63	0.958532
9095	3R_DroMel_CAF1	24,274,949 – 24,275,049	- - - - - - - - -	14557	24,274,949 – 24,275,049	+	6	112	78.25	-2.29	0.59	0.940709
9095	3R_DroMel_CAF1	24,274,949 – 24,275,049	- - - - - - - - -	14558	24,274,949 – 24,275,049	-	6	112	78.25	-2.17	0.52	0.828810
9096	3R_DroMel_CAF1	24,277,010 – 24,277,105	- - - - - - - - -	14559	24,277,010 – 24,277,105	-	6	119	77.37	-1.20	0.69	0.691225
9097	3R_DroMel_CAF1	24,278,860 – 24,278,955	- - - - - - - - -	14560	24,278,860 – 24,278,955	+	6	113	83.38	-2.64	0.60	0.609157
9098	3R_DroMel_CAF1	24,280,409 – 24,280,507	- - - - - - - - -	14561	24,280,409 – 24,280,507	-	4	103	85.57	-2.27	0.63	0.749521
9099	3R_DroMel_CAF1	24,281,707 – 24,281,808	- - - - - - - - -	14562	24,281,707 – 24,281,808	-	6	120	80.92	-2.36	0.72	0.908358
9100	3R_DroMel_CAF1	24,288,474 – 24,288,593	- - - - - - - - -	14563	24,288,474 – 24,288,593	+	3	120	86.11	-2.34	0.79	0.835456
9101	3R_DroMel_CAF1	24,288,910 – 24,289,024	- - - - - - - - -	14564	24,288,910 – 24,289,024	+	5	114	96.01	-1.62	0.96	0.989492
9101	3R_DroMel_CAF1	24,288,910 – 24,289,024	- - - - - - - - -	14565	24,288,910 – 24,289,024	-	5	114	96.01	-1.62	0.92	0.973199
9102	3R_DroMel_CAF1	24,289,582 – 24,289,673	- - - - - - - - -	14566	24,289,582 – 24,289,673	+	6	103	85.55	-3.04	0.81	0.932690
9103	3R_DroMel_CAF1	24,293,594 – 24,293,709	- - - - - - - - -	14567	24,293,594 – 24,293,709	-	6	115	79.36	-1.77	0.68	0.851015
9104	3R_DroMel_CAF1	24,304,634 – 24,304,726	- - - - - - - - -	14568	24,304,634 – 24,304,726	+	5	95	91.55	-2.79	0.89	0.999821
9105	3R_DroMel_CAF1	24,305,620 – 24,305,750	- - - - - - - - -	14569	24,305,620 – 24,305,722	+	5	105	86.99	-1.76	0.70	0.562167
9105	3R_DroMel_CAF1	24,305,620 – 24,305,750	- - - - - - - - -	14570	24,305,651 – 24,305,750	-	5	102	87.80	-2.06	0.88	0.984124
9106	3R_DroMel_CAF1	24,306,823 – 24,306,913	- - - - - - - - -	14571	24,306,823 – 24,306,913	-	5	90	88.67	-1.53	0.82	0.711461
9107	3R_DroMel_CAF1	24,307,251 – 24,307,390	- - - - - - - - -	14572	24,307,251 – 24,307,362	+	6	119	78.87	-2.80	0.57	0.970498
				14573	24,307,251 – 24,307,362	-	6	119	78.87	-2.39	0.70	0.962295
				14574	24,307,290 – 24,307,390	+	6	113	74.56	-1.81	0.50	0.716261
9108	3R_DroMel_CAF1	24,312,290 – 24,312,381	- - - - - - - - -	14575	24,312,290 – 24,312,381	-	6	98	76.66	-1.95	0.56	0.875080
9109	3R_DroMel_CAF1	24,316,282 – 24,316,395	- - - - - - - - -	14576	24,316,282 – 24,316,381	+	6	120	79.70	-1.80	0.56	0.553883
				14577	24,316,282 – 24,316,381	-	6	120	79.70	-1.63	0.67	0.766615
				14578	24,316,302 – 24,316,395	+	6	111	83.43	-3.49	0.56	0.799272
9110	3R_DroMel_CAF1	24,318,208 – 24,318,325	- - - - - - - - -	14579	24,318,208 – 24,318,325	+	5	119	93.46	-2.25	0.85	0.995608
9111	3R_DroMel_CAF1	24,319,951 – 24,320,071	- - - "knownCDS=Parent=FBtr0085291;Name=Dhc98D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1842-RA" - - - - -	14580	24,319,951 – 24,320,071	+	6	120	77.94	-2.12	0.43	0.500000
9112	3R_DroMel_CAF1	24,321,123 – 24,321,238	- - - "knownCDS=Parent=FBtr0085291;Name=Dhc98D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1842-RA" - - - - -	14581	24,321,123 – 24,321,238	+	6	115	73.58	-2.30	0.46	0.967076
9112	3R_DroMel_CAF1	24,321,123 – 24,321,238		14582	24,321,123 – 24,321,238	-	6	115	73.58	-2.21	0.45	0.939397
9113	3R_DroMel_CAF1	24,321,339 – 24,321,454	- - - "knownCDS=Parent=FBtr0085291;Name=Dhc98D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1842-RA" - - - - -	14583	24,321,339 – 24,321,454	+	6	115	80.23	-2.12	0.50	0.540957
9114	3R_DroMel_CAF1	24,323,035 – 24,323,127	- - - - - - - - -	14584	24,323,035 – 24,323,127	-	6	95	77.62	-2.64	0.56	0.978213
9115	3R_DroMel_CAF1	24,326,967 – 24,327,086	- - - "knownCDS=Parent=FBtr0085291;Name=Dhc98D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1842-RA" - - - - -	14585	24,326,967 – 24,327,086	+	6	120	92.40	-2.01	0.93	0.995841
9116	3R_DroMel_CAF1	24,331,285 – 24,331,435	- - - - - - - - -	14586	24,331,285 – 24,331,385	+	4	120	75.29	-2.04	0.61	0.941474
9116	3R_DroMel_CAF1	24,331,285 – 24,331,435	- - - - - - - - -	14587	24,331,345 – 24,331,435	-	5	90	95.00	-2.06	0.93	0.998810
9117	3R_DroMel_CAF1	24,341,322 – 24,341,470	- - - - - - - - -	14588	24,341,322 – 24,341,436	-	6	114	86.37	-1.50	0.86	0.567966
9117	3R_DroMel_CAF1	24,341,322 – 24,341,470	- - - - - - - - -	14589	24,341,362 – 24,341,470	-	5	108	92.53	-1.08	0.96	0.601627
9118	3R_DroMel_CAF1	24,343,550 – 24,343,665	- - - "knownCDS=Parent=FBtr0085291;Name=Dhc98D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1842-RA" - - - - -	14590	24,343,550 – 24,343,665	-	6	115	80.95	-1.44	0.68	0.607312
9119	3R_DroMel_CAF1	24,349,216 – 24,349,331	- - - "knownCDS=Parent=FBtr0085294;Name=Ppn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33103-RA" - - - - -	14591	24,349,216 – 24,349,331	-	6	118	76.13	-1.84	0.61	0.911821
9120	3R_DroMel_CAF1	24,349,477 – 24,349,577	- - - "knownCDS=Parent=FBtr0085294;Name=Ppn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33103-RA" - - - - -	14592	24,349,477 – 24,349,577	+	6	108	73.98	-1.24	0.62	0.562883
9121	3R_DroMel_CAF1	24,350,637 – 24,350,744	- - - "knownCDS=Parent=FBtr0085294, FBtr0085295;Name=Ppn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33103-RA, FlyBase+Annotation+IDs:CG33103-RB" - - - - -	14593	24,350,637 – 24,350,744	-	6	107	75.26	-1.76	0.49	0.575924
9122	3R_DroMel_CAF1	24,359,168 – 24,359,272	- - - - - - - - -	14594	24,359,168 – 24,359,272	+	6	120	85.65	-2.30	0.73	0.530771
9123	3R_DroMel_CAF1	24,359,394 – 24,359,510	- - - - - - - - -	14595	24,359,394 – 24,359,510	-	5	118	90.33	-1.83	0.71	0.510035
9124	3R_DroMel_CAF1	24,361,182 – 24,361,303	- - - - - - - - -	14596	24,361,182 – 24,361,275	-	6	93	92.47	-1.84	0.87	0.884552
9124	3R_DroMel_CAF1	24,361,182 – 24,361,303	- - - - - - - - -	14597	24,361,197 – 24,361,303	-	6	111	78.69	-1.89	0.52	0.583515
9125	3R_DroMel_CAF1	24,361,471 – 24,361,573	- - - - - - - - -	14598	24,361,471 – 24,361,573	-	3	102	82.03	-2.17	0.71	0.873616
9126	3R_DroMel_CAF1	24,361,760 – 24,361,861	- - - - - - - - -	14599	24,361,760 – 24,361,861	-	6	105	80.13	-1.48	0.69	0.706652
9127	3R_DroMel_CAF1	24,364,863 – 24,364,957	- - - - - - - - -	14600	24,364,863 – 24,364,957	+	5	94	94.79	-3.91	0.91	0.999957
9127	3R_DroMel_CAF1	24,364,863 – 24,364,957	- - - - - - - - -	14601	24,364,863 – 24,364,957	-	5	94	94.79	-3.93	0.87	0.999750
9128	3R_DroMel_CAF1	24,370,467 – 24,370,572	- - - - - - - - -	14602	24,370,467 – 24,370,572	-	4	117	79.80	-1.91	0.63	0.749857
9129	3R_DroMel_CAF1	24,371,485 – 24,371,661	- - - - - - - - -	14603	24,371,485 – 24,371,605	+	6	120	98.17	-1.33	0.94	0.951396
				14604	24,371,485 – 24,371,605	-	6	120	98.17	-2.22	0.92	0.997009
				14605	24,371,565 – 24,371,661	+	5	96	86.81	-1.72	0.83	0.812177
				14606	24,371,565 – 24,371,661	-	5	96	86.81	-2.70	0.79	0.990119
9130	3R_DroMel_CAF1	24,374,597 – 24,374,784	- - - - - - - - -	14607	24,374,597 – 24,374,687	-	6	104	85.48	-1.94	0.79	0.623291
				14608	24,374,659 – 24,374,756	+	5	110	82.35	-1.60	0.73	0.590454
				14609	24,374,687 – 24,374,784	-	4	110	73.09	-1.55	0.60	0.555008
9131	3R_DroMel_CAF1	24,374,852 – 24,374,993	- - - - - - - - -	14610	24,374,852 – 24,374,970	-	5	120	63.59	-2.33	0.43	0.977451
9131	3R_DroMel_CAF1	24,374,852 – 24,374,993	- - - - - - - - -	14611	24,374,892 – 24,374,993	-	5	111	67.78	-1.87	0.49	0.895306
9132	3R_DroMel_CAF1	24,377,422 – 24,377,514	- - - - - - - - -	14612	24,377,422 – 24,377,514	-	3	110	75.64	-1.90	0.63	0.927477
9133	3R_DroMel_CAF1	24,378,111 – 24,378,216	- - - - - - - - -	14613	24,378,111 – 24,378,216	-	6	116	78.31	-1.37	0.63	0.560461
9134	3R_DroMel_CAF1	24,380,055 – 24,380,147	- - - - - - - - -	14614	24,380,055 – 24,380,147	+	6	100	93.71	-2.14	0.83	0.799967
9135	3R_DroMel_CAF1	24,381,182 – 24,381,275	- - - - - - - - -	14615	24,381,182 – 24,381,275	-	6	120	79.99	-2.02	0.54	0.611701
9136	3R_DroMel_CAF1	24,382,547 – 24,382,648	- - - - - - - - -	14616	24,382,547 – 24,382,648	+	5	120	85.56	-1.62	0.88	0.771037
9137	3R_DroMel_CAF1	24,382,888 – 24,382,983	- - - - - - - - -	14617	24,382,888 – 24,382,983	+	6	111	79.26	-2.11	0.65	0.912691
9137	3R_DroMel_CAF1	24,382,888 – 24,382,983	- - - - - - - - -	14618	24,382,888 – 24,382,983	-	6	111	79.26	-1.88	0.57	0.687812
9138	3R_DroMel_CAF1	24,383,233 – 24,383,457	- - - - - - - - -	14619	24,383,233 – 24,383,340	-	3	108	78.98	-1.86	0.70	0.872322
				14620	24,383,340 – 24,383,457	+	6	120	84.20	-3.31	0.69	0.815587
				14621	24,383,340 – 24,383,457	-	6	120	84.20	-3.47	0.80	0.953314
9139	3R_DroMel_CAF1	24,388,699 – 24,388,806	- - - - - - - - -	14622	24,388,699 – 24,388,806	-	3	117	70.26	-2.73	0.60	0.999959
9140	3R_DroMel_CAF1	24,390,465 – 24,390,632	- - - - - - - - -	14623	24,390,465 – 24,390,564	+	6	120	83.65	-1.99	0.77	0.710467
				14624	24,390,465 – 24,390,564	-	6	120	83.65	-1.66	0.72	0.514350
				14625	24,390,527 – 24,390,632	+	6	114	82.08	-2.25	0.55	0.542832
9141	3R_DroMel_CAF1	24,390,730 – 24,390,825	- - - - - - - - -	14626	24,390,730 – 24,390,825	-	6	117	81.85	-2.60	0.98	0.990697
9142	3R_DroMel_CAF1	24,392,515 – 24,392,627	- - - - - - - - -	14627	24,392,515 – 24,392,607	-	6	92	81.43	-1.70	0.62	0.548716
9142	3R_DroMel_CAF1	24,392,515 – 24,392,627	- - - - - - - - -	14628	24,392,532 – 24,392,627	-	6	120	80.70	-1.63	0.62	0.583434
9143	3R_DroMel_CAF1	24,395,192 – 24,395,287	- - - - - - - - -	14629	24,395,192 – 24,395,287	+	6	117	80.75	-2.10	0.63	0.806064
9143	3R_DroMel_CAF1	24,395,192 – 24,395,287	- - - - - - - - -	14630	24,395,192 – 24,395,287	-	6	117	80.75	-2.22	0.71	0.898511
9144	3R_DroMel_CAF1	24,395,823 – 24,395,921	- - - - - - - - -	14631	24,395,823 – 24,395,921	+	6	98	79.66	-1.78	0.57	0.597703
9144	3R_DroMel_CAF1	24,395,823 – 24,395,921	- - - - - - - - -	14632	24,395,823 – 24,395,921	-	6	98	79.66	-1.48	0.62	0.556121
9145	3R_DroMel_CAF1	24,397,227 – 24,397,318	- - - - - - - - -	14633	24,397,227 – 24,397,318	+	6	104	82.44	-2.74	0.64	0.823367
9145	3R_DroMel_CAF1	24,397,227 – 24,397,318	- - - - - - - - -	14634	24,397,227 – 24,397,318	-	6	104	82.44	-2.65	0.72	0.873337
9146	3R_DroMel_CAF1	24,398,765 – 24,398,855	- - - - - - - - -	14635	24,398,765 – 24,398,855	-	5	97	84.91	-1.55	0.74	0.523917
9147	3R_DroMel_CAF1	24,399,449 – 24,399,549	- - - - - - - - -	14636	24,399,449 – 24,399,549	+	6	120	78.05	-2.18	0.45	0.653566
9148	3R_DroMel_CAF1	24,400,199 – 24,400,328	- - - - - - - - -	14637	24,400,199 – 24,400,291	-	6	110	85.40	-1.51	0.83	0.510753
9148	3R_DroMel_CAF1	24,400,199 – 24,400,328	- - - - - - - - -	14638	24,400,212 – 24,400,328	-	6	117	78.58	-1.68	0.77	0.911723
9149	3R_DroMel_CAF1	24,400,966 – 24,401,060	- - - - - - - - -	14639	24,400,966 – 24,401,060	-	4	98	78.25	-2.03	0.74	0.954277
9150	3R_DroMel_CAF1	24,401,493 – 24,401,587	- - - - - - - - -	14640	24,401,493 – 24,401,587	+	6	113	74.97	-2.61	0.38	0.954453
9151	3R_DroMel_CAF1	24,403,686 – 24,403,793	- - - - - - - - -	14641	24,403,686 – 24,403,793	+	3	108	94.41	-2.52	0.96	0.971952
9151	3R_DroMel_CAF1	24,403,686 – 24,403,793	- - - - - - - - -	14642	24,403,686 – 24,403,793	-	3	108	94.41	-2.13	0.99	0.959303
9152	3R_DroMel_CAF1	24,405,795 – 24,405,900	- - - - - - - - -	14643	24,405,795 – 24,405,900	+	3	109	94.15	-2.14	0.86	0.704530
9153	3R_DroMel_CAF1	24,408,129 – 24,408,303	- - - - - - - - -	14644	24,408,129 – 24,408,223	+	4	98	93.75	-2.49	0.82	0.891311
				14645	24,408,152 – 24,408,263	+	6	116	81.93	-2.04	0.63	0.682643
				14646	24,408,152 – 24,408,263	-	6	116	81.93	-2.20	0.62	0.706838
				14647	24,408,185 – 24,408,303	-	6	120	80.51	-2.15	0.61	0.810782
9154	3R_DroMel_CAF1	24,410,916 – 24,411,036	- - - - - - - - -	14648	24,410,916 – 24,411,036	+	6	120	99.44	-1.33	1.00	0.991680
9155	3R_DroMel_CAF1	24,415,749 – 24,415,841	- - - - - - - - -	14649	24,415,749 – 24,415,841	+	6	104	79.99	-2.01	0.57	0.722621
9156	3R_DroMel_CAF1	24,416,120 – 24,416,226	- - - - - - - - -	14650	24,416,120 – 24,416,226	-	6	106	82.75	-1.63	0.77	0.653534
9157	3R_DroMel_CAF1	24,417,243 – 24,417,334	- - - - - - - - -	14651	24,417,243 – 24,417,334	-	3	91	85.71	-1.74	0.78	0.540832
9158	3R_DroMel_CAF1	24,417,720 – 24,417,814	- - - - - - - - -	14652	24,417,720 – 24,417,814	+	6	113	77.43	-1.47	0.71	0.863020
9158	3R_DroMel_CAF1	24,417,720 – 24,417,814	- - - - - - - - -	14653	24,417,720 – 24,417,814	-	6	113	77.43	-1.18	0.71	0.719099
9159	3R_DroMel_CAF1	24,420,911 – 24,421,002	- - - - - - - - -	14654	24,420,911 – 24,421,002	-	6	102	77.06	-1.64	0.58	0.696024
9160	3R_DroMel_CAF1	24,422,039 – 24,422,135	- - - - - - - - -	14655	24,422,039 – 24,422,135	+	6	109	79.26	-1.95	0.65	0.883379
9161	3R_DroMel_CAF1	24,422,270 – 24,422,361	- - - - - - - - -	14656	24,422,270 – 24,422,361	+	6	91	92.89	-1.58	0.93	0.966486
9162	3R_DroMel_CAF1	24,422,479 – 24,422,575	- - - - - - - - -	14657	24,422,479 – 24,422,575	-	6	113	77.89	-2.66	0.58	0.978159
9163	3R_DroMel_CAF1	24,423,418 – 24,423,533	- - - - - - - - -	14658	24,423,418 – 24,423,533	-	6	117	94.70	-1.29	1.00	0.992025
9164	3R_DroMel_CAF1	24,426,427 – 24,426,534	- - - "knownCDS=Parent=FBtr0085300;Name=Hrb98DE-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9983-RB" - - - - -	14659	24,426,427 – 24,426,534	+	6	114	79.78	-1.88	0.59	0.724445
9164	3R_DroMel_CAF1	24,426,427 – 24,426,534		14660	24,426,427 – 24,426,534	-	6	114	79.78	-2.04	0.70	0.907673
9165	3R_DroMel_CAF1	24,427,250 – 24,427,349	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002585;Name=psi28s-3405a;Dbxref=FB:FBgn0082960 ,GB:AJ809582" - - - - - - - -	14661	24,427,250 – 24,427,349	+	6	105	80.01	-1.55	0.81	0.827868
9166	3R_DroMel_CAF1	24,427,881 – 24,427,995	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002588;Name=psi28s-3405c;Dbxref=FB:FBgn0082958 ,GB:AJ809584" - - - - - - - -	14662	24,427,881 – 24,427,995	+	6	117	77.50	-1.19	0.78	0.809777
9167	3R_DroMel_CAF1	24,428,117 – 24,428,226	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002589;Name=psi28s-3305b;Dbxref=FB:FBgn0082975 ,GB:AJ809587" - - - - - - - -	14663	24,428,117 – 24,428,226	+	6	116	76.62	-0.72	0.80	0.556813
9168	3R_DroMel_CAF1	24,431,148 – 24,431,250	- - - - - - - - -	14664	24,431,148 – 24,431,250	+	6	113	81.07	-1.25	0.75	0.587963
9169	3R_DroMel_CAF1	24,442,553 – 24,442,644	- - - - - - - - -	14665	24,442,553 – 24,442,644	+	4	97	93.09	-1.32	0.96	0.595697
9170	3R_DroMel_CAF1	24,447,063 – 24,447,197	- - - - - - - - -	14666	24,447,063 – 24,447,166	-	5	107	79.69	-1.91	0.63	0.788223
9170	3R_DroMel_CAF1	24,447,063 – 24,447,197	- - - - - - - - -	14667	24,447,103 – 24,447,197	-	6	115	70.55	-2.44	0.27	0.904834
9171	3R_DroMel_CAF1	24,451,186 – 24,451,277	- - - - - - - - -	14668	24,451,186 – 24,451,277	-	6	117	62.74	-1.92	0.29	0.554854
9172	3R_DroMel_CAF1	24,466,098 – 24,466,217	- - - - - - - - -	14669	24,466,098 – 24,466,217	+	5	120	93.80	-2.02	0.91	0.997682
9172	3R_DroMel_CAF1	24,466,098 – 24,466,217	- - - - - - - - -	14670	24,466,098 – 24,466,217	-	5	120	93.80	-2.31	0.74	0.750156
9173	3R_DroMel_CAF1	24,469,151 – 24,469,304	- - - - - - - - -	14671	24,469,151 – 24,469,247	+	5	106	85.14	-1.71	0.73	0.627549
				14672	24,469,151 – 24,469,247	-	5	106	85.14	-2.38	0.69	0.889020
				14673	24,469,169 – 24,469,280	-	5	113	90.07	-2.18	0.73	0.789078
				14674	24,469,207 – 24,469,304	+	5	103	88.24	-2.12	0.73	0.807648
				14675	24,469,207 – 24,469,304	-	5	103	88.24	-2.72	0.76	0.976775
9174	3R_DroMel_CAF1	24,474,243 – 24,474,333	- - - - - - - - -	14676	24,474,243 – 24,474,333	+	6	108	77.76	-1.57	0.80	0.920954
9175	3R_DroMel_CAF1	24,474,743 – 24,474,881	- - - - - - - - -	14677	24,474,743 – 24,474,853	+	5	111	94.84	-1.76	0.90	0.985838
9175	3R_DroMel_CAF1	24,474,743 – 24,474,881	- - - - - - - - -	14678	24,474,781 – 24,474,881	+	5	110	88.56	-1.58	0.76	0.579726
9176	3R_DroMel_CAF1	24,482,202 – 24,482,305	- - - - - - - - -	14679	24,482,202 – 24,482,305	-	5	116	78.15	-2.25	0.34	0.892667
9177	3R_DroMel_CAF1	24,485,689 – 24,485,793	- - - - - - - - -	14680	24,485,689 – 24,485,793	+	6	113	75.46	-0.95	0.72	0.659196
9178	3R_DroMel_CAF1	24,485,848 – 24,485,938	- - - - - - - - -	14681	24,485,848 – 24,485,938	-	6	96	80.23	-1.67	0.74	0.827995
9179	3R_DroMel_CAF1	24,488,182 – 24,488,296	- - - - - - - - -	14682	24,488,182 – 24,488,296	-	3	117	79.02	-2.48	0.54	0.709043
9180	3R_DroMel_CAF1	24,490,452 – 24,490,549	- - - - - - - - -	14683	24,490,452 – 24,490,549	+	6	101	97.29	-2.93	0.91	0.999601
9180	3R_DroMel_CAF1	24,490,452 – 24,490,549	- - - - - - - - -	14684	24,490,452 – 24,490,549	-	6	101	97.29	-3.30	0.95	0.999962
9181	3R_DroMel_CAF1	24,492,410 – 24,492,502	- - - - - - - - -	14685	24,492,410 – 24,492,502	+	6	106	74.06	-1.20	0.63	0.555954
9182	3R_DroMel_CAF1	24,494,587 – 24,494,686	- - - - - - - - -	14686	24,494,587 – 24,494,686	+	3	99	94.61	-2.60	0.82	0.753710
9183	3R_DroMel_CAF1	24,494,899 – 24,495,098	- - - - - - - - -	14687	24,494,899 – 24,495,018	+	4	120	86.39	-1.95	0.73	0.811161
9183	3R_DroMel_CAF1	24,494,899 – 24,495,098	- - - - - - - - -	14688	24,494,978 – 24,495,098	+	4	120	86.67	-2.12	0.80	0.915320
9184	3R_DroMel_CAF1	24,495,138 – 24,495,442	- - - "knownCDS=Parent=FBtr0085306;Name=CG33346-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33346-RA" - - - - -	14689	24,495,138 – 24,495,258	+	4	120	91.11	-2.39	0.87	0.973836
				14690	24,495,138 – 24,495,258	-	4	120	91.11	-1.96	0.89	0.938113
				14691	24,495,178 – 24,495,298	+	4	120	90.56	-2.14	0.76	0.823720
				14692	24,495,218 – 24,495,338	+	4	120	86.81	-2.28	0.67	0.810947
				14693	24,495,338 – 24,495,442	-	4	104	90.54	-2.73	0.79	0.950989
9185	3R_DroMel_CAF1	24,495,901 – 24,496,021	- - - "knownCDS=Parent=FBtr0085306;Name=CG33346-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33346-RA" - - - - -	14694	24,495,901 – 24,496,021	+	4	120	93.06	-1.43	0.89	0.595376
9186	3R_DroMel_CAF1	24,498,070 – 24,498,169	- - - - - - - - -	14695	24,498,070 – 24,498,169	+	5	99	83.84	-2.22	0.78	0.943654
9186	3R_DroMel_CAF1	24,498,070 – 24,498,169	- - - - - - - - -	14696	24,498,070 – 24,498,169	-	5	99	83.84	-1.81	0.90	0.885360
9187	3R_DroMel_CAF1	24,500,528 – 24,500,630	- - - - - - - - -	14697	24,500,528 – 24,500,630	+	6	111	72.31	-2.17	0.27	0.560255
9188	3R_DroMel_CAF1	24,503,921 – 24,504,012	- - - - - - - - -	14698	24,503,921 – 24,504,012	-	6	96	78.56	-2.53	0.46	0.866015
9189	3R_DroMel_CAF1	24,505,357 – 24,505,451	- - - - - - - - -	14699	24,505,357 – 24,505,451	+	5	94	89.04	-1.32	0.85	0.541646
9190	3R_DroMel_CAF1	24,510,128 – 24,510,226	- - - - - - - - -	14700	24,510,128 – 24,510,226	-	6	100	84.34	-3.17	0.67	0.741925
9191	3R_DroMel_CAF1	24,511,164 – 24,511,320	- - - - - - - - -	14701	24,511,164 – 24,511,269	+	6	109	81.40	-2.27	0.70	0.865763
				14702	24,511,199 – 24,511,295	+	6	110	78.21	-2.88	0.69	0.983302
				14703	24,511,199 – 24,511,295	-	6	110	78.21	-1.61	0.65	0.811145
				14704	24,511,230 – 24,511,320	+	5	90	98.67	-1.15	0.97	0.500000
9192	3R_DroMel_CAF1	24,518,541 – 24,518,661	- - - "knownCDS=Parent=FBtr0085308, FBtr0085309;Name=CG9990-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9990-RA, FlyBase+Annotation+IDs:CG9990-RB" - - - - -	14705	24,518,541 – 24,518,661	-	6	120	85.72	-1.93	0.77	0.510915
9193	3R_DroMel_CAF1	24,522,376 – 24,522,485	- - - "knownCDS=Parent=FBtr0085310;Name=huntingtin-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9995-RA" - - - - -	14706	24,522,376 – 24,522,485	-	6	120	76.66	-1.66	0.55	0.631868
9194	3R_DroMel_CAF1	24,522,670 – 24,522,777	- - - - - - - - -	14707	24,522,670 – 24,522,777	+	6	109	82.60	-1.46	0.74	0.567043
9195	3R_DroMel_CAF1	24,523,551 – 24,523,678	- - - - - - - - -	14708	24,523,551 – 24,523,642	-	5	92	88.95	-1.96	0.76	0.836812
9195	3R_DroMel_CAF1	24,523,551 – 24,523,678	- - - - - - - - -	14709	24,523,566 – 24,523,678	-	6	115	79.33	-2.82	0.35	0.625366
9196	3R_DroMel_CAF1	24,525,910 – 24,526,006	- - - - - - - - -	14710	24,525,910 – 24,526,006	+	6	113	78.42	-1.57	0.62	0.707114
9197	3R_DroMel_CAF1	24,526,109 – 24,526,205	- - - "knownCDS=Parent=FBtr0085310;Name=huntingtin-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9995-RA" - - - - -	14711	24,526,109 – 24,526,205	-	6	117	70.51	-1.77	0.40	0.589701
9198	3R_DroMel_CAF1	24,528,968 – 24,529,098	- - - - - - - - -	14712	24,528,968 – 24,529,058	+	6	111	81.50	-1.49	0.78	0.693519
9198	3R_DroMel_CAF1	24,528,968 – 24,529,098	- - - - - - - - -	14713	24,528,980 – 24,529,098	+	6	120	95.17	-1.40	0.95	0.976571
9199	3R_DroMel_CAF1	24,532,732 – 24,532,827	- - - - - - - - -	14714	24,532,732 – 24,532,827	+	6	97	75.78	-1.73	0.62	0.896307
9200	3R_DroMel_CAF1	24,533,423 – 24,533,518	- - - - - - - - -	14715	24,533,423 – 24,533,518	+	6	110	78.87	-1.02	0.88	0.611706
9201	3R_DroMel_CAF1	24,533,852 – 24,533,947	- - - - - - - - -	14716	24,533,852 – 24,533,947	-	6	97	85.90	-1.86	0.81	0.608711
9202	3R_DroMel_CAF1	24,538,447 – 24,538,542	- - - - - - - - -	14717	24,538,447 – 24,538,542	+	5	95	92.11	-1.80	0.83	0.936148
9202	3R_DroMel_CAF1	24,538,447 – 24,538,542	- - - - - - - - -	14718	24,538,447 – 24,538,542	-	5	95	92.11	-2.04	0.76	0.830228
9203	3R_DroMel_CAF1	24,542,679 – 24,542,769	- - - - - - - - -	14719	24,542,679 – 24,542,769	+	5	90	96.22	-1.69	0.79	0.528406
9203	3R_DroMel_CAF1	24,542,679 – 24,542,769	- - - - - - - - -	14720	24,542,679 – 24,542,769	-	5	90	96.22	-2.11	0.93	0.998460
9204	3R_DroMel_CAF1	24,542,788 – 24,542,881	- - - - - - - - -	14721	24,542,788 – 24,542,881	+	5	105	88.24	-1.66	0.83	0.808837
9205	3R_DroMel_CAF1	24,543,083 – 24,543,173	- - - - - - - - -	14722	24,543,083 – 24,543,173	+	6	112	82.83	-1.44	0.71	0.500000
9205	3R_DroMel_CAF1	24,543,083 – 24,543,173	- - - - - - - - -	14723	24,543,083 – 24,543,173	-	6	112	82.83	-2.09	0.75	0.770627
9206	3R_DroMel_CAF1	24,545,153 – 24,545,243	- - - - - - - - -	14724	24,545,153 – 24,545,243	-	6	95	88.36	-1.42	0.91	0.720730
9207	3R_DroMel_CAF1	24,546,539 – 24,546,698	- - - "knownCDS=Parent=FBtr0085310;Name=huntingtin-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9995-RA" - - - - -	14725	24,546,539 – 24,546,658	+	6	119	79.94	-2.11	0.61	0.845462
				14726	24,546,539 – 24,546,658	-	6	119	79.94	-2.42	0.60	0.906241
				14727	24,546,578 – 24,546,698	+	6	120	80.00	-2.70	0.51	0.889531
				14728	24,546,578 – 24,546,698	-	6	120	80.00	-3.34	0.57	0.975449
9208	3R_DroMel_CAF1	24,547,499 – 24,547,604	- - - - - - - - -	14729	24,547,499 – 24,547,604	-	6	108	75.00	-1.07	0.69	0.658484
9209	3R_DroMel_CAF1	24,548,554 – 24,548,687	- - - - - - - - -	14730	24,548,554 – 24,548,657	+	6	119	81.54	-3.94	0.40	0.899941
				14731	24,548,554 – 24,548,657	-	6	119	81.54	-2.69	0.52	0.727854
				14732	24,548,588 – 24,548,687	+	6	108	78.69	-3.38	0.62	0.988579
				14733	24,548,588 – 24,548,687	-	6	108	78.69	-1.87	0.70	0.917274
9210	3R_DroMel_CAF1	24,549,311 – 24,549,414	- - - - - - - - -	14734	24,549,311 – 24,549,414	+	4	105	91.90	-2.05	0.75	0.688340
9211	3R_DroMel_CAF1	24,550,560 – 24,550,657	- - - - - - - - -	14735	24,550,560 – 24,550,657	+	5	101	81.70	-1.68	0.65	0.558668
9211	3R_DroMel_CAF1	24,550,560 – 24,550,657	- - - - - - - - -	14736	24,550,560 – 24,550,657	-	5	101	81.70	-2.71	0.64	0.976590
9212	3R_DroMel_CAF1	24,551,633 – 24,551,746	- - - - - - - - -	14737	24,551,633 – 24,551,746	-	6	115	84.14	-2.23	0.72	0.648220
9213	3R_DroMel_CAF1	24,555,023 – 24,555,122	- - - - - - - - -	14738	24,555,023 – 24,555,122	+	6	100	79.06	-1.72	0.61	0.739583
9213	3R_DroMel_CAF1	24,555,023 – 24,555,122	- - - - - - - - -	14739	24,555,023 – 24,555,122	-	6	100	79.06	-1.39	0.70	0.750969
9214	3R_DroMel_CAF1	24,561,039 – 24,561,131	- - - - - - - - -	14740	24,561,039 – 24,561,131	-	6	120	75.60	-2.28	0.42	0.857547
9215	3R_DroMel_CAF1	24,561,626 – 24,561,720	- - - - - - - - -	14741	24,561,626 – 24,561,720	+	6	95	82.19	-2.05	0.61	0.607096
9216	3R_DroMel_CAF1	24,566,529 – 24,566,649	- - - "knownCDS=Parent=FBtr0085316;Name=AR-2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10001-RA" - - - - -	14742	24,566,529 – 24,566,649	-	6	120	81.28	-2.13	0.53	0.507031
9217	3R_DroMel_CAF1	24,566,740 – 24,566,843	- - - - - - - - -	14743	24,566,740 – 24,566,843	+	6	103	88.48	-2.04	0.81	0.593388
9218	3R_DroMel_CAF1	24,568,142 – 24,568,253	- - - - - - - - -	14744	24,568,142 – 24,568,253	+	5	111	90.27	-1.61	0.74	0.514216
9218	3R_DroMel_CAF1	24,568,142 – 24,568,253	- - - - - - - - -	14745	24,568,142 – 24,568,253	-	5	111	90.27	-1.90	0.74	0.687838
9219	3R_DroMel_CAF1	24,571,447 – 24,571,548	- - - - - - - - -	14746	24,571,447 – 24,571,548	-	3	105	90.91	-1.76	0.87	0.550043
9220	3R_DroMel_CAF1	24,572,297 – 24,572,394	- - - - - - - - -	14747	24,572,297 – 24,572,394	-	6	100	92.31	-2.71	0.77	0.520614
9221	3R_DroMel_CAF1	24,573,154 – 24,573,257	- - - - - - - - -	14748	24,573,154 – 24,573,257	-	6	105	76.06	-1.20	0.85	0.899835
9222	3R_DroMel_CAF1	24,575,303 – 24,575,470	- - - - - - - - -	14749	24,575,303 – 24,575,408	+	5	105	87.81	-1.56	0.79	0.637943
9222	3R_DroMel_CAF1	24,575,303 – 24,575,470	- - - - - - - - -	14750	24,575,374 – 24,575,470	+	5	96	72.77	-1.92	0.13	0.912671
9223	3R_DroMel_CAF1	24,575,990 – 24,576,086	- - - "knownCDS=Parent=FBtr0085315;Name=CG10000-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10000-RA" - - - - -	14751	24,575,990 – 24,576,086	-	6	105	78.47	-0.91	0.74	0.500000
9224	3R_DroMel_CAF1	24,580,915 – 24,581,012	- - - - - - - - -	14752	24,580,915 – 24,581,012	+	5	98	91.20	-1.43	0.79	0.563565
9225	3R_DroMel_CAF1	24,597,183 – 24,597,278	- - - - - - - - -	14753	24,597,183 – 24,597,278	+	5	95	92.21	-1.67	0.93	0.985987
9226	3R_DroMel_CAF1	24,601,700 – 24,601,797	- - - - - - - - -	14754	24,601,700 – 24,601,797	+	6	120	81.81	-1.53	0.75	0.669624
9227	3R_DroMel_CAF1	24,605,589 – 24,605,679	- - - - - - - - -	14755	24,605,589 – 24,605,679	-	6	101	77.15	-2.18	0.42	0.620813
9228	3R_DroMel_CAF1	24,607,787 – 24,607,882	- - - - - - - - -	14756	24,607,787 – 24,607,882	+	6	95	81.86	-1.28	0.74	0.536331
9229	3R_DroMel_CAF1	24,611,689 – 24,611,779	- - - - - - - - -	14757	24,611,689 – 24,611,779	+	6	96	80.46	-2.38	0.59	0.854483
9230	3R_DroMel_CAF1	24,611,843 – 24,611,945	- - - - - - - - -	14758	24,611,843 – 24,611,945	-	6	109	80.73	-1.50	0.65	0.578413
9231	3R_DroMel_CAF1	24,612,614 – 24,612,707	- - - - - - - - -	14759	24,612,614 – 24,612,707	-	6	96	91.56	-2.88	0.90	0.998739
9232	3R_DroMel_CAF1	24,613,199 – 24,613,299	- - - - - - - - -	14760	24,613,199 – 24,613,299	-	6	100	88.13	-2.44	0.76	0.510182
9233	3R_DroMel_CAF1	24,617,762 – 24,617,880	- - - - - - - - -	14761	24,617,762 – 24,617,880	-	5	118	96.61	-1.20	0.93	0.672440
9234	3R_DroMel_CAF1	24,626,215 – 24,626,326	- - - - - - - - -	14762	24,626,215 – 24,626,326	-	5	111	96.40	-1.30	0.92	0.801380
9235	3R_DroMel_CAF1	24,628,368 – 24,628,464	- - - - - - - - -	14763	24,628,368 – 24,628,464	+	6	117	68.90	-1.90	0.34	0.658425
9235	3R_DroMel_CAF1	24,628,368 – 24,628,464	- - - - - - - - -	14764	24,628,368 – 24,628,464	-	6	117	68.90	-1.94	0.35	0.766289
9236	3R_DroMel_CAF1	24,630,799 – 24,630,906	- - - - - - - - -	14765	24,630,799 – 24,630,906	+	6	120	79.09	-2.13	0.59	0.870339
9237	3R_DroMel_CAF1	24,631,332 – 24,631,436	- - - - - - - - -	14766	24,631,332 – 24,631,436	-	5	110	84.64	-2.00	0.62	0.581371
9238	3R_DroMel_CAF1	24,634,765 – 24,634,869	- - - "knownCDS=Parent=FBtr0085356;Name=wdn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1454-RA" - - - - -	14767	24,634,765 – 24,634,869	+	6	116	69.41	-1.83	0.55	0.948056
9239	3R_DroMel_CAF1	24,635,351 – 24,635,511	- - - "knownCDS=Parent=FBtr0085356;Name=wdn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1454-RA" - - - - -	14768	24,635,351 – 24,635,471	+	4	120	87.08	-1.41	0.80	0.540572
				14769	24,635,351 – 24,635,471	-	4	120	87.08	-2.54	0.83	0.978565
				14770	24,635,391 – 24,635,511	+	4	120	87.22	-2.09	0.70	0.803204
				14771	24,635,391 – 24,635,511	-	4	120	87.22	-1.62	0.85	0.745539
9240	3R_DroMel_CAF1	24,638,249 – 24,638,352	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002592;Name=snoRNA:291;Dbxref=FB:FBgn0065070,GB:NR_002503" - - - - - - - "Flybase=FBgn0065070:snoRNA:291:nuclear_small_nucleolar_RNA_gene\|2e-31"	14772	24,638,249 – 24,638,352	+	6	106	79.10	-2.10	0.76	0.944245
9241	3R_DroMel_CAF1	24,644,535 – 24,644,655	- - - "knownCDS=Parent=FBtr0085355;Name=CG1523-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1523-RA" - - - - -	14773	24,644,535 – 24,644,655	+	6	120	79.89	-1.83	0.57	0.596699
9242	3R_DroMel_CAF1	24,651,838 – 24,651,930	- - - - - - - - -	14774	24,651,838 – 24,651,930	+	6	104	81.81	-1.42	0.74	0.607862
9243	3R_DroMel_CAF1	24,654,826 – 24,654,971	- - - - - - - - -	14775	24,654,826 – 24,654,942	+	5	120	86.38	-2.55	0.68	0.875047
9243	3R_DroMel_CAF1	24,654,826 – 24,654,971	- - - - - - - - -	14776	24,654,863 – 24,654,971	+	5	109	87.29	-1.92	0.70	0.633834
9244	3R_DroMel_CAF1	24,657,594 – 24,657,698	- - - - - - - - -	14777	24,657,594 – 24,657,698	-	6	120	77.12	-1.24	0.64	0.529431
9245	3R_DroMel_CAF1	24,661,338 – 24,661,429	- - - "knownCDS=Parent=FBtr0085351;Name=Apc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1451-RA" - - - - -	14778	24,661,338 – 24,661,429	-	6	97	81.05	-2.01	0.68	0.821905
9246	3R_DroMel_CAF1	24,661,938 – 24,662,043	- - - "knownCDS=Parent=FBtr0085351;Name=Apc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1451-RA" - - - - -	14779	24,661,938 – 24,662,043	-	6	105	82.37	-1.82	0.70	0.679029
9247	3R_DroMel_CAF1	24,663,286 – 24,663,393	- - - "knownCDS=Parent=FBtr0085351;Name=Apc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1451-RA" - - - - -	14780	24,663,286 – 24,663,393	+	6	113	82.57	-2.00	0.62	0.557864
9248	3R_DroMel_CAF1	24,669,035 – 24,669,132	- - - - - - - - -	14781	24,669,035 – 24,669,132	-	5	97	87.11	-1.77	0.69	0.549893
9249	3R_DroMel_CAF1	24,670,983 – 24,671,143	- - - - - - - - -	14782	24,670,983 – 24,671,103	+	5	120	95.33	-2.26	0.91	0.999173
				14783	24,671,023 – 24,671,143	+	5	120	89.50	-2.66	0.66	0.597771
				14784	24,671,023 – 24,671,143	-	5	120	89.50	-2.12	0.73	0.781679
9250	3R_DroMel_CAF1	24,671,780 – 24,671,977	- - - - - - - - -	14785	24,671,780 – 24,671,900	+	5	120	96.50	-1.64	0.86	0.865457
				14786	24,671,780 – 24,671,900	-	5	120	96.50	-2.58	0.96	0.999895
				14787	24,671,820 – 24,671,940	-	5	120	95.00	-2.56	0.89	0.999491
				14788	24,671,860 – 24,671,977	-	5	120	91.53	-2.21	0.87	0.996271
9251	3R_DroMel_CAF1	24,671,996 – 24,672,116	- - - - - - - - -	14789	24,671,996 – 24,672,116	-	5	120	93.32	-1.31	0.84	0.620524
9252	3R_DroMel_CAF1	24,672,516 – 24,672,702	- - - - - - - - -	14790	24,672,516 – 24,672,629	+	5	120	89.46	-1.75	0.76	0.702275
				14791	24,672,556 – 24,672,667	+	5	120	90.02	-1.48	0.78	0.559341
				14792	24,672,556 – 24,672,667	-	5	120	90.02	-1.44	0.78	0.548332
				14793	24,672,589 – 24,672,702	-	5	120	90.79	-1.98	0.82	0.959214
9253	3R_DroMel_CAF1	24,672,929 – 24,673,049	- - - - - - - - -	14794	24,672,929 – 24,673,049	+	5	120	86.25	-1.88	0.72	0.708315
9254	3R_DroMel_CAF1	24,673,308 – 24,673,533	- - - - - - - - -	14795	24,673,308 – 24,673,413	-	4	120	77.00	-1.51	0.69	0.549021
				14796	24,673,343 – 24,673,453	-	5	120	76.46	-1.49	0.65	0.581077
				14797	24,673,413 – 24,673,533	+	5	120	91.30	-1.39	0.83	0.636234
9255	3R_DroMel_CAF1	24,674,187 – 24,674,361	- - - - - - - - -	14798	24,674,187 – 24,674,307	-	5	120	98.67	-1.69	0.94	0.961213
				14799	24,674,227 – 24,674,332	-	4	107	96.23	-2.11	0.98	0.954036
				14800	24,674,267 – 24,674,361	+	4	96	95.79	-2.07	0.95	0.938161
				14801	24,674,267 – 24,674,361	-	4	96	95.79	-2.57	0.87	0.923543
9256	3R_DroMel_CAF1	24,674,401 – 24,674,508	- - - - - - - - -	14802	24,674,401 – 24,674,508	+	5	120	94.47	-1.31	0.97	0.931287
9257	3R_DroMel_CAF1	24,674,926 – 24,675,031	- - - - - - - - -	14803	24,674,926 – 24,675,031	+	5	120	89.26	-3.22	0.84	0.999497
9258	3R_DroMel_CAF1	24,675,754 – 24,675,934	- - - - - - - - -	14804	24,675,754 – 24,675,874	+	5	120	93.73	-1.77	0.85	0.957108
9258	3R_DroMel_CAF1	24,675,754 – 24,675,934	- - - - - - - - -	14805	24,675,834 – 24,675,934	+	5	120	89.20	-1.56	0.84	0.803883
9259	3R_DroMel_CAF1	24,677,406 – 24,677,522	- - - - - - - - -	14806	24,677,406 – 24,677,522	+	5	120	85.48	-2.09	0.97	0.991968
9259	3R_DroMel_CAF1	24,677,406 – 24,677,522	- - - - - - - - -	14807	24,677,406 – 24,677,522	-	5	120	85.48	-2.60	0.67	0.899266
9260	3R_DroMel_CAF1	24,678,306 – 24,678,565	- - - "knownCDS=Parent=FBtr0085327;Name=CG31048-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31048-RA" - - - - -	14808	24,678,306 – 24,678,420	-	5	120	93.47	-3.23	0.79	0.992770
				14809	24,678,420 – 24,678,539	+	5	120	97.65	-1.23	0.91	0.550463
				14810	24,678,459 – 24,678,565	+	5	112	95.94	-1.22	0.93	0.754201
				14811	24,678,459 – 24,678,565	-	5	112	95.94	-1.31	0.88	0.694956
9261	3R_DroMel_CAF1	24,681,354 – 24,681,455	- - - - - - - - -	14812	24,681,354 – 24,681,455	+	5	116	71.35	-1.54	0.03	0.582107
9262	3R_DroMel_CAF1	24,684,021 – 24,684,111	- - - - - - - - -	14813	24,684,021 – 24,684,111	+	6	90	83.89	-2.97	0.71	0.815275
9263	3R_DroMel_CAF1	24,687,038 – 24,687,165	- - - - - - - - -	14814	24,687,038 – 24,687,139	+	5	102	90.17	-1.85	0.74	0.668879
				14815	24,687,038 – 24,687,139	-	5	102	90.17	-2.36	0.81	0.984636
				14816	24,687,070 – 24,687,165	+	5	95	92.42	-1.76	0.77	0.722667
				14817	24,687,070 – 24,687,165	-	5	95	92.42	-2.16	0.91	0.998906
9264	3R_DroMel_CAF1	24,692,285 – 24,692,393	- - - "knownCDS=Parent=FBtr0085327;Name=CG31048-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31048-RA" - - - - -	14818	24,692,285 – 24,692,393	-	6	119	77.69	-2.28	0.72	0.973319
9265	3R_DroMel_CAF1	24,694,721 – 24,694,814	- - - - - - - - -	14819	24,694,721 – 24,694,814	+	6	96	85.80	-1.92	0.81	0.665449
9266	3R_DroMel_CAF1	24,700,911 – 24,701,004	- - - "knownCDS=Parent=FBtr0085348;Name=CG33203-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33203-RC" - - - - -	14820	24,700,911 – 24,701,004	+	6	105	78.77	-1.97	0.60	0.845126
9266	3R_DroMel_CAF1	24,700,911 – 24,701,004		14821	24,700,911 – 24,701,004	-	6	105	78.77	-1.26	0.76	0.759658
9267	3R_DroMel_CAF1	24,706,049 – 24,706,145	- - - - - - - - -	14822	24,706,049 – 24,706,145	-	3	96	80.56	-1.66	0.69	0.631350
9268	3R_DroMel_CAF1	24,708,665 – 24,708,784	- - - - - - - - -	14823	24,708,665 – 24,708,784	+	3	120	94.15	-2.37	0.91	0.907995
9269	3R_DroMel_CAF1	24,714,547 – 24,714,644	- - - - - - - - -	14824	24,714,547 – 24,714,644	-	4	98	83.16	-1.35	0.86	0.521571
9270	3R_DroMel_CAF1	24,715,377 – 24,715,477	- - - - - - - - -	14825	24,715,377 – 24,715,477	-	5	108	76.95	-1.92	0.43	0.661938
9271	3R_DroMel_CAF1	24,721,643 – 24,721,733	- - - - - - - - -	14826	24,721,643 – 24,721,733	+	3	90	95.56	-2.13	0.82	0.530297
9272	3R_DroMel_CAF1	24,726,161 – 24,726,275	- - - - - - - - -	14827	24,726,161 – 24,726,275	-	4	114	97.81	-2.12	0.99	0.911269
9273	3R_DroMel_CAF1	24,729,803 – 24,729,899	- - - - - - - - -	14828	24,729,803 – 24,729,899	-	5	102	94.11	-1.26	0.89	0.729706
9274	3R_DroMel_CAF1	24,731,653 – 24,731,744	- - - "knownCDS=Parent=FBtr0091524;Name=Doa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33553-RD" - - - - -	14829	24,731,653 – 24,731,744	+	6	91	76.78	-1.99	0.62	0.940303
9274	3R_DroMel_CAF1	24,731,653 – 24,731,744		14830	24,731,653 – 24,731,744	-	6	91	76.78	-1.97	0.53	0.823988
9275	3R_DroMel_CAF1	24,732,291 – 24,732,389	- - - "knownCDS=Parent=FBtr0091524;Name=Doa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33553-RD" - - - - -	14831	24,732,291 – 24,732,389	-	6	101	82.22	-1.85	0.63	0.560697
9276	3R_DroMel_CAF1	24,733,923 – 24,734,040	- - - "knownCDS=Parent=FBtr0091524;Name=Doa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33553-RD" - - - - -	14832	24,733,923 – 24,734,040	+	6	117	68.39	-2.71	0.34	0.991115
9276	3R_DroMel_CAF1	24,733,923 – 24,734,040		14833	24,733,923 – 24,734,040	-	6	117	68.39	-2.14	0.28	0.780547
9277	3R_DroMel_CAF1	24,734,584 – 24,734,695	- - - "knownCDS=Parent=FBtr0091524;Name=Doa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33553-RD" - - - - -	14834	24,734,584 – 24,734,695	-	6	120	80.82	-2.20	0.67	0.868637
9278	3R_DroMel_CAF1	24,735,625 – 24,735,718	- - - "knownCDS=Parent=FBtr0091526;Name=Doa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33553-RC" - - - - -	14835	24,735,625 – 24,735,718	+	6	114	76.20	-1.26	0.62	0.500000
9279	3R_DroMel_CAF1	24,735,833 – 24,735,950	- - - "knownCDS=Parent=FBtr0091526;Name=Doa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33553-RC" - - - - -	14836	24,735,833 – 24,735,950	+	6	117	78.92	-2.13	0.46	0.542978
9279	3R_DroMel_CAF1	24,735,833 – 24,735,950		14837	24,735,833 – 24,735,950	-	6	117	78.92	-2.07	0.57	0.825928
9280	3R_DroMel_CAF1	24,737,070 – 24,737,213	- - - - - - - - -	14838	24,737,070 – 24,737,178	+	5	109	96.03	-1.99	0.92	0.997304
9280	3R_DroMel_CAF1	24,737,070 – 24,737,213	- - - - - - - - -	14839	24,737,109 – 24,737,213	+	6	105	82.46	-1.87	0.72	0.715267
9281	3R_DroMel_CAF1	24,743,713 – 24,743,806	- - - "knownCDS=Parent=FBtr0089470;Name=CG33204-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33204-RA" - - - - -	14840	24,743,713 – 24,743,806	+	6	102	78.53	-1.82	0.56	0.665882
9282	3R_DroMel_CAF1	24,745,948 – 24,746,039	- - - "knownCDS=Parent=FBtr0091524;Name=Doa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33553-RD" - - - - -	14841	24,745,948 – 24,746,039	+	6	91	78.28	-2.45	0.69	0.972542
9283	3R_DroMel_CAF1	24,747,621 – 24,747,769	- - - - - - - - -	14842	24,747,621 – 24,747,730	-	6	120	80.69	-2.68	0.55	0.874223
9283	3R_DroMel_CAF1	24,747,621 – 24,747,769	- - - - - - - - -	14843	24,747,657 – 24,747,769	-	6	120	82.36	-2.20	0.66	0.728063
9284	3R_DroMel_CAF1	24,748,227 – 24,748,322	- - - - - - - - -	14844	24,748,227 – 24,748,322	+	6	120	82.22	-1.43	0.72	0.564224
9284	3R_DroMel_CAF1	24,748,227 – 24,748,322	- - - - - - - - -	14845	24,748,227 – 24,748,322	-	6	120	82.22	-1.45	0.67	0.500000
9285	3R_DroMel_CAF1	24,748,927 – 24,749,087	- - - - - - - - -	14846	24,748,927 – 24,749,047	-	5	120	88.97	-1.85	0.79	0.863168
9285	3R_DroMel_CAF1	24,748,927 – 24,749,087	- - - - - - - - -	14847	24,748,967 – 24,749,087	-	5	120	92.00	-2.20	0.84	0.991416
9286	3R_DroMel_CAF1	24,749,952 – 24,750,042	- - - "knownCDS=Parent=FBtr0085338;Name=CG11828-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11828-RA" - - - - -	14848	24,749,952 – 24,750,042	+	6	111	70.86	-1.82	0.38	0.587644
9287	3R_DroMel_CAF1	24,754,049 – 24,754,174	- - - - - - - - -	14849	24,754,049 – 24,754,144	-	6	98	70.48	-2.05	0.51	0.969025
9287	3R_DroMel_CAF1	24,754,049 – 24,754,174	- - - - - - - - -	14850	24,754,074 – 24,754,174	-	6	107	83.27	-1.58	0.72	0.530541
9288	3R_DroMel_CAF1	24,758,389 – 24,758,488	- - - - - - - - -	14851	24,758,389 – 24,758,488	+	6	109	78.26	-2.32	0.47	0.800558
9289	3R_DroMel_CAF1	24,758,841 – 24,758,937	- - - - - - - - -	14852	24,758,841 – 24,758,937	-	6	109	76.98	-0.72	0.80	0.521245
9290	3R_DroMel_CAF1	24,759,848 – 24,759,952	- - - - - - - - -	14853	24,759,848 – 24,759,952	-	3	105	96.83	-1.81	0.92	0.648485
9291	3R_DroMel_CAF1	24,760,359 – 24,760,464	- - - - - - - - -	14854	24,760,359 – 24,760,464	+	4	117	72.78	-2.23	0.54	0.968744
9292	3R_DroMel_CAF1	24,761,988 – 24,762,099	- - - - - - - - -	14855	24,761,988 – 24,762,099	-	5	120	85.43	-1.81	0.67	0.558831
9293	3R_DroMel_CAF1	24,762,113 – 24,762,207	- - - - - - - - -	14856	24,762,113 – 24,762,207	+	3	113	74.69	-1.88	0.65	0.964557
9294	3R_DroMel_CAF1	24,763,180 – 24,763,323	- - - - - - - - -	14857	24,763,180 – 24,763,297	-	4	120	96.25	-1.55	0.90	0.532820
9294	3R_DroMel_CAF1	24,763,180 – 24,763,323	- - - - - - - - -	14858	24,763,220 – 24,763,323	-	3	110	84.85	-2.57	0.74	0.896983
9295	3R_DroMel_CAF1	24,763,351 – 24,763,456	- - - - - - - - -	14859	24,763,351 – 24,763,456	-	4	120	76.24	-2.88	0.55	0.995634
9296	3R_DroMel_CAF1	24,769,410 – 24,769,555	- - - - - - - - -	14860	24,769,410 – 24,769,515	+	3	112	86.31	-1.49	0.90	0.700644
9296	3R_DroMel_CAF1	24,769,410 – 24,769,555	- - - - - - - - -	14861	24,769,436 – 24,769,555	+	3	119	86.13	-1.67	0.84	0.604145
9297	3R_DroMel_CAF1	24,770,636 – 24,770,736	- - - - - - - - -	14862	24,770,636 – 24,770,736	+	3	108	69.77	-1.94	0.53	0.914960
9298	3R_DroMel_CAF1	24,771,015 – 24,771,149	- - - - - - - - -	14863	24,771,015 – 24,771,119	+	3	108	80.66	-2.10	0.63	0.797783
				14864	24,771,015 – 24,771,119	-	3	108	80.66	-2.06	0.70	0.879898
				14865	24,771,053 – 24,771,149	+	3	100	94.33	-1.92	0.89	0.643716
9299	3R_DroMel_CAF1	24,772,037 – 24,772,130	- - - - - - - - -	14866	24,772,037 – 24,772,130	-	3	98	76.06	-2.69	0.54	0.966695
9300	3R_DroMel_CAF1	24,772,340 – 24,772,454	- - - - - - - - -	14867	24,772,340 – 24,772,454	+	3	120	83.75	-2.72	0.72	0.939286
9301	3R_DroMel_CAF1	24,773,593 – 24,773,702	- - - - - - - - -	14868	24,773,593 – 24,773,702	-	5	120	86.09	-1.81	0.65	0.500000
9302	3R_DroMel_CAF1	24,774,511 – 24,774,614	- - - - - - - - -	14869	24,774,511 – 24,774,614	-	5	120	85.31	-1.71	0.70	0.584606
9303	3R_DroMel_CAF1	24,774,848 – 24,775,042	- - - - - - - - -	14870	24,774,848 – 24,774,962	-	4	116	91.08	-1.91	0.73	0.616643
9303	3R_DroMel_CAF1	24,774,848 – 24,775,042	- - - - - - - - -	14871	24,774,922 – 24,775,042	+	5	120	99.00	-1.26	1.00	0.694426
9304	3R_DroMel_CAF1	24,776,168 – 24,776,288	- - - - - - - - -	14872	24,776,168 – 24,776,288	+	5	120	95.08	-1.32	0.87	0.701830
9304	3R_DroMel_CAF1	24,776,168 – 24,776,288	- - - - - - - - -	14873	24,776,168 – 24,776,288	-	5	120	95.08	-2.03	0.89	0.995809
9305	3R_DroMel_CAF1	24,776,328 – 24,776,448	- - - - - - - - -	14874	24,776,328 – 24,776,448	+	5	120	98.17	-1.28	0.97	0.772051
9306	3R_DroMel_CAF1	24,776,961 – 24,777,117	- - - - - - - - -	14875	24,776,961 – 24,777,081	+	5	120	100.00	-2.19	1.00	0.995962
				14876	24,776,961 – 24,777,081	-	5	120	100.00	-1.66	1.00	0.939353
				14877	24,777,001 – 24,777,117	+	5	120	96.77	-1.10	0.96	0.600569
				14878	24,777,001 – 24,777,117	-	5	120	96.77	-1.29	0.93	0.803162
9307	3R_DroMel_CAF1	24,777,430 – 24,777,538	- - - - - - - - -	14879	24,777,430 – 24,777,538	+	5	120	88.29	-1.50	0.77	0.564081
9308	3R_DroMel_CAF1	24,777,805 – 24,777,979	- - - - - - - - -	14880	24,777,805 – 24,777,912	+	5	120	77.57	-1.45	0.68	0.577336
9308	3R_DroMel_CAF1	24,777,805 – 24,777,979	- - - - - - - - -	14881	24,777,874 – 24,777,979	+	5	120	83.21	-2.12	0.60	0.682405
9309	3R_DroMel_CAF1	24,778,239 – 24,778,337	- - - - - - - - -	14882	24,778,239 – 24,778,337	+	3	98	95.24	-2.23	0.95	0.926039
9310	3R_DroMel_CAF1	24,778,728 – 24,778,847	- - - - - - - - -	14883	24,778,728 – 24,778,847	-	5	120	95.31	-1.36	0.89	0.812689
9311	3R_DroMel_CAF1	24,778,966 – 24,779,078	- - - - - - - - -	14884	24,778,966 – 24,779,078	+	5	120	74.37	-1.76	0.48	0.603506
9311	3R_DroMel_CAF1	24,778,966 – 24,779,078	- - - - - - - - -	14885	24,778,966 – 24,779,078	-	5	120	74.37	-2.11	0.62	0.979713
9312	3R_DroMel_CAF1	24,779,653 – 24,779,790	- - - - - - - - -	14886	24,779,653 – 24,779,766	+	5	120	94.22	-1.10	0.93	0.577751
				14887	24,779,653 – 24,779,766	-	5	120	94.22	-1.15	0.94	0.695782
				14888	24,779,693 – 24,779,790	-	5	120	86.83	-1.51	0.82	0.609028
9313	3R_DroMel_CAF1	24,779,830 – 24,779,981	- - - - - - - - -	14889	24,779,830 – 24,779,941	-	5	120	93.87	-1.42	0.91	0.914559
				14890	24,779,870 – 24,779,981	+	5	120	87.73	-1.44	0.78	0.511783
				14891	24,779,870 – 24,779,981	-	5	120	87.73	-2.03	0.69	0.662947
9314	3R_DroMel_CAF1	24,780,231 – 24,780,351	- - - - - - - - -	14892	24,780,231 – 24,780,351	+	5	120	95.96	-1.25	0.92	0.743205
9315	3R_DroMel_CAF1	24,780,391 – 24,780,551	- - - - - - - - -	14893	24,780,391 – 24,780,511	+	5	120	96.30	-1.58	0.99	0.990009
				14894	24,780,431 – 24,780,551	+	5	120	99.00	-2.46	1.01	0.999536
				14895	24,780,431 – 24,780,551	-	5	120	99.00	-1.66	0.98	0.968771
9316	3R_DroMel_CAF1	24,781,529 – 24,781,637	- - - - - - - - -	14896	24,781,529 – 24,781,637	-	4	120	89.06	-1.60	0.73	0.584410
9317	3R_DroMel_CAF1	24,782,709 – 24,782,969	- - - - - - - - -	14897	24,782,709 – 24,782,816	+	4	120	89.09	-1.82	0.71	0.642167
				14898	24,782,709 – 24,782,816	-	4	120	89.09	-3.89	0.69	0.881297
				14899	24,782,737 – 24,782,856	-	3	119	95.52	-1.75	0.89	0.527730
				14900	24,782,777 – 24,782,896	+	4	120	95.68	-1.72	0.87	0.629991
				14901	24,782,816 – 24,782,929	+	4	113	99.56	-2.00	0.99	0.709798
				14902	24,782,856 – 24,782,969	+	4	113	98.67	-1.89	0.94	0.660505
				14903	24,782,856 – 24,782,969	-	4	113	98.67	-1.86	0.98	0.717563
9318	3R_DroMel_CAF1	24,783,176 – 24,783,391	- - - - - - - - -	14904	24,783,176 – 24,783,275	-	3	120	68.91	-2.60	0.43	0.868895
9318	3R_DroMel_CAF1	24,783,176 – 24,783,391	- - - - - - - - -	14905	24,783,275 – 24,783,391	+	4	120	89.55	-2.22	0.81	0.924891
9319	3R_DroMel_CAF1	24,783,787 – 24,783,907	- - - - - - - - -	14906	24,783,787 – 24,783,907	-	3	120	94.17	-2.14	0.95	0.919062
9320	3R_DroMel_CAF1	24,784,065 – 24,784,185	- - - - - - - - -	14907	24,784,065 – 24,784,185	+	3	120	98.89	-1.84	0.89	0.554331
9320	3R_DroMel_CAF1	24,784,065 – 24,784,185	- - - - - - - - -	14908	24,784,065 – 24,784,185	-	3	120	98.89	-1.85	1.01	0.875099
9321	3R_DroMel_CAF1	24,785,302 – 24,785,422	- - - - - - - - -	14909	24,785,302 – 24,785,422	-	3	120	88.89	-2.26	0.85	0.818943
9322	3R_DroMel_CAF1	24,786,030 – 24,786,147	- - - - - - - - -	14910	24,786,030 – 24,786,147	+	3	120	89.01	-2.84	0.87	0.955073
9323	3R_DroMel_CAF1	24,786,546 – 24,786,696	- - - - - - - - -	14911	24,786,546 – 24,786,656	+	3	120	88.32	-2.14	0.78	0.636039
9323	3R_DroMel_CAF1	24,786,546 – 24,786,696	- - - - - - - - -	14912	24,786,586 – 24,786,696	+	3	120	88.32	-2.01	0.80	0.604062
9324	3R_DroMel_CAF1	24,787,107 – 24,787,297	- - - - - - - - -	14913	24,787,107 – 24,787,217	-	3	120	91.29	-2.27	0.88	0.849829
				14914	24,787,139 – 24,787,257	+	3	120	97.22	-1.48	1.00	0.661068
				14915	24,787,139 – 24,787,257	-	3	120	97.22	-1.82	0.95	0.747298
				14916	24,787,177 – 24,787,297	+	3	120	99.44	-1.78	0.97	0.771014
9325	3R_DroMel_CAF1	24,788,413 – 24,788,645	- - - - - - - - -	14917	24,788,413 – 24,788,528	+	3	120	92.05	-2.07	0.88	0.749247
9325	3R_DroMel_CAF1	24,788,413 – 24,788,645	- - - - - - - - -	14918	24,788,528 – 24,788,645	-	3	120	92.11	-1.26	0.98	0.566433
9326	3R_DroMel_CAF1	24,788,700 – 24,788,856	- - - - - - - - -	14919	24,788,700 – 24,788,820	-	3	120	96.63	-1.33	0.99	0.508961
				14920	24,788,740 – 24,788,856	+	3	120	93.26	-1.89	0.94	0.819930
				14921	24,788,740 – 24,788,856	-	3	120	93.26	-2.25	0.91	0.893912
9327	3R_DroMel_CAF1	24,789,304 – 24,789,448	- - - - - - - - -	14922	24,789,304 – 24,789,419	+	5	115	81.09	-2.29	0.64	0.928942
9327	3R_DroMel_CAF1	24,789,304 – 24,789,448	- - - - - - - - -	14923	24,789,339 – 24,789,448	+	5	109	76.74	-3.03	0.48	0.998898
9328	3R_DroMel_CAF1	24,789,958 – 24,790,058	- - - - - - - - -	14924	24,789,958 – 24,790,058	+	6	104	79.48	-2.20	0.60	0.879466
9328	3R_DroMel_CAF1	24,789,958 – 24,790,058	- - - - - - - - -	14925	24,789,958 – 24,790,058	-	6	104	79.48	-1.59	0.70	0.810097
9329	3R_DroMel_CAF1	24,793,164 – 24,793,256	- - - - - - - - -	14926	24,793,164 – 24,793,256	+	6	92	80.35	-2.10	0.66	0.868629
9329	3R_DroMel_CAF1	24,793,164 – 24,793,256	- - - - - - - - -	14927	24,793,164 – 24,793,256	-	6	92	80.35	-2.19	0.63	0.865135
9330	3R_DroMel_CAF1	24,793,739 – 24,793,846	- - - - - - - - -	14928	24,793,739 – 24,793,846	+	5	117	86.19	-2.37	0.70	0.879240
9330	3R_DroMel_CAF1	24,793,739 – 24,793,846	- - - - - - - - -	14929	24,793,739 – 24,793,846	-	5	117	86.19	-2.45	0.68	0.854823
9331	3R_DroMel_CAF1	24,796,552 – 24,796,684	- - - - - - - - -	14930	24,796,552 – 24,796,653	-	6	120	76.43	-2.00	0.44	0.549960
				14931	24,796,582 – 24,796,684	+	6	107	96.14	-1.67	0.93	0.985194
				14932	24,796,582 – 24,796,684	-	6	107	96.14	-1.49	0.94	0.973782
9332	3R_DroMel_CAF1	24,798,055 – 24,798,153	- - - - - - - - -	14933	24,798,055 – 24,798,153	+	6	98	81.99	-2.02	0.65	0.698433
9333	3R_DroMel_CAF1	24,799,222 – 24,799,314	- - - - - - - - -	14934	24,799,222 – 24,799,314	-	6	100	80.37	-2.52	0.65	0.925216
9334	3R_DroMel_CAF1	24,800,368 – 24,800,484	- - - - - - - - -	14935	24,800,368 – 24,800,462	+	6	107	80.34	-1.57	0.64	0.636616
				14936	24,800,386 – 24,800,484	+	6	116	79.18	-1.81	0.71	0.893961
				14937	24,800,386 – 24,800,484	-	6	116	79.18	-1.95	0.65	0.880480
9335	3R_DroMel_CAF1	24,803,633 – 24,803,787	- - - "knownCDS=Parent=FBtr0085339;Name=CG14520-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14520-RA" - - - - -	14938	24,803,633 – 24,803,725	-	5	94	95.52	-1.94	0.95	0.998561
				14939	24,803,688 – 24,803,787	+	5	111	88.26	-2.38	0.71	0.855480
				14940	24,803,688 – 24,803,787	-	5	111	88.26	-3.10	0.76	0.989412
9336	3R_DroMel_CAF1	24,804,937 – 24,805,031	- - - - - - - - -	14941	24,804,937 – 24,805,031	-	3	94	97.16	-1.63	0.97	0.687548
9337	3R_DroMel_CAF1	24,805,399 – 24,805,498	- - - - - - - - -	14942	24,805,399 – 24,805,498	+	6	108	76.85	-1.30	0.67	0.726336
9338	3R_DroMel_CAF1	24,806,845 – 24,806,941	- - - - - - - - -	14943	24,806,845 – 24,806,941	+	6	112	81.99	-2.87	0.49	0.669949
9339	3R_DroMel_CAF1	24,810,373 – 24,810,497	- - - - - - - - -	14944	24,810,373 – 24,810,471	+	6	110	78.92	-1.30	0.65	0.549270
				14945	24,810,373 – 24,810,471	-	6	110	78.92	-1.34	0.68	0.668532
				14946	24,810,406 – 24,810,497	+	6	105	80.16	-1.12	0.70	0.510177
				14947	24,810,406 – 24,810,497	-	6	105	80.16	-1.20	0.80	0.643210
9340	3R_DroMel_CAF1	24,812,569 – 24,812,682	- - - - - - - - -	14948	24,812,569 – 24,812,682	+	5	120	93.02	-2.80	0.79	0.990575
9340	3R_DroMel_CAF1	24,812,569 – 24,812,682	- - - - - - - - -	14949	24,812,569 – 24,812,682	-	5	120	93.02	-2.09	0.82	0.967545
9341	3R_DroMel_CAF1	24,814,975 – 24,815,089	- - - - - - - - -	14950	24,814,975 – 24,815,089	+	4	115	86.78	-1.61	0.69	0.583551
9342	3R_DroMel_CAF1	24,825,013 – 24,825,117	- - - - - - - - -	14951	24,825,013 – 24,825,117	+	6	120	58.47	-1.66	0.38	0.788500
9343	3R_DroMel_CAF1	24,825,399 – 24,825,527	- - - - - - - - -	14952	24,825,399 – 24,825,513	+	6	120	73.94	-1.62	0.56	0.775239
				14953	24,825,399 – 24,825,513	-	6	120	73.94	-1.60	0.58	0.811339
				14954	24,825,433 – 24,825,527	-	6	120	74.04	-0.68	0.77	0.614397
9344	3R_DroMel_CAF1	24,828,277 – 24,828,372	- - - - - - - - -	14955	24,828,277 – 24,828,372	-	6	95	80.34	-1.47	0.68	0.661251
9345	3R_DroMel_CAF1	24,829,352 – 24,829,445	- - - - - - - - -	14956	24,829,352 – 24,829,445	+	6	98	79.04	-2.47	0.48	0.838671
9346	3R_DroMel_CAF1	24,832,033 – 24,832,133	- - - - - - - - -	14957	24,832,033 – 24,832,133	-	3	100	75.54	-1.32	0.67	0.513057
9347	3R_DroMel_CAF1	24,841,051 – 24,841,163	- - - - - - - - -	14958	24,841,051 – 24,841,163	+	6	117	82.66	-2.32	0.60	0.624058
9347	3R_DroMel_CAF1	24,841,051 – 24,841,163	- - - - - - - - -	14959	24,841,051 – 24,841,163	-	6	117	82.66	-2.43	0.70	0.801546
9348	3R_DroMel_CAF1	24,841,946 – 24,842,038	- - - - - - - - -	14960	24,841,946 – 24,842,038	+	5	92	97.39	-2.67	0.91	0.999327
9349	3R_DroMel_CAF1	24,847,938 – 24,848,046	- - - - - - - - -	14961	24,847,938 – 24,848,046	-	5	112	81.13	-1.62	0.66	0.552654
9350	3R_DroMel_CAF1	24,857,327 – 24,857,447	- - - "knownCDS=Parent=FBtr0085343;Name=Ssl2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11833-RA" - - - - -	14962	24,857,327 – 24,857,447	+	6	120	78.67	-1.49	0.68	0.786090
9351	3R_DroMel_CAF1	24,867,072 – 24,867,165	- - - "knownCDS=Parent=FBtr0085359;Name=Pkc98E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1954-RA" - - - - -	14963	24,867,072 – 24,867,165	+	6	93	79.42	-1.25	0.67	0.562780
9351	3R_DroMel_CAF1	24,867,072 – 24,867,165		14964	24,867,072 – 24,867,165	-	6	93	79.42	-1.78	0.57	0.627967
9352	3R_DroMel_CAF1	24,869,648 – 24,869,777	- - "RNAmicro=f:24869648_t:24869763_strand:-_p:0.961117" - - - - - -	14965	24,869,648 – 24,869,744	+	6	116	68.54	-4.68	0.57	0.992300
				14966	24,869,648 – 24,869,744	-	6	116	68.54	-4.23	0.47	0.998728
				14967	24,869,673 – 24,869,777	+	6	113	74.89	-1.67	0.55	0.741198
9353	3R_DroMel_CAF1	24,869,874 – 24,870,004	- - - - - - - - -	14968	24,869,874 – 24,869,966	+	5	119	71.11	-1.95	0.69	0.990679
				14969	24,869,874 – 24,869,966	-	5	119	71.11	-1.82	0.57	0.912126
				14970	24,869,887 – 24,870,004	+	5	119	85.71	-2.91	0.80	0.995303
9354	3R_DroMel_CAF1	24,874,644 – 24,874,805	- - - - - - - - -	14971	24,874,644 – 24,874,752	+	6	110	86.91	-2.25	0.88	0.950279
9354	3R_DroMel_CAF1	24,874,644 – 24,874,805	- - - - - - - - -	14972	24,874,713 – 24,874,805	-	5	92	96.50	-1.43	0.96	0.953346
9355	3R_DroMel_CAF1	24,877,132 – 24,877,233	- - - "knownCDS=Parent=FBtr0085361;Name=CG11841-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11841-RA" - - - - -	14973	24,877,132 – 24,877,233	-	6	114	77.71	-1.32	0.64	0.620802
9356	3R_DroMel_CAF1	24,885,857 – 24,885,963	- - - "knownCDS=Parent=FBtr0085417;Name=cul-5-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1401-RA" - - - - -	14974	24,885,857 – 24,885,963	+	6	111	73.71	-1.70	0.58	0.879345
9357	3R_DroMel_CAF1	24,886,056 – 24,886,162	- - - "knownCDS=Parent=FBtr0085417;Name=cul-5-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1401-RA" - - - - -	14975	24,886,056 – 24,886,162	-	6	113	82.53	-1.66	0.72	0.631341
9358	3R_DroMel_CAF1	24,887,944 – 24,888,117	- - - "knownCDS=Parent=FBtr0085417;Name=cul-5-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1401-RA" - - - - -	14976	24,887,944 – 24,888,037	+	6	120	66.91	-1.70	0.55	0.921133
				14977	24,887,944 – 24,888,037	-	6	120	66.91	-2.79	0.59	0.995712
				14978	24,887,984 – 24,888,077	+	5	93	96.13	-1.49	0.90	0.904587
				14979	24,887,984 – 24,888,077	-	5	93	96.13	-1.19	0.89	0.519816
				14980	24,888,016 – 24,888,117	+	5	101	92.87	-2.21	0.92	0.999393
				14981	24,888,016 – 24,888,117	-	5	101	92.87	-2.56	0.91	0.999825
9359	3R_DroMel_CAF1	24,888,664 – 24,888,758	- - - - - - - - -	14982	24,888,664 – 24,888,758	+	6	120	72.54	-2.25	0.55	0.985799
9359	3R_DroMel_CAF1	24,888,664 – 24,888,758	- - - - - - - - -	14983	24,888,664 – 24,888,758	-	6	120	72.54	-3.88	0.66	0.995373
9360	3R_DroMel_CAF1	24,889,394 – 24,889,514	- - - - - - - - -	14984	24,889,394 – 24,889,514	-	5	120	89.66	-1.94	0.77	0.857779
9361	3R_DroMel_CAF1	24,891,613 – 24,891,718	- - - - - - - - -	14985	24,891,613 – 24,891,718	+	5	107	96.92	-1.61	0.86	0.841216
9361	3R_DroMel_CAF1	24,891,613 – 24,891,718	- - - - - - - - -	14986	24,891,613 – 24,891,718	-	5	107	96.92	-1.70	0.87	0.923281
9362	3R_DroMel_CAF1	24,892,203 – 24,892,296	- - - - - - - - -	14987	24,892,203 – 24,892,296	+	5	93	92.69	-1.85	0.81	0.919150
9363	3R_DroMel_CAF1	24,892,773 – 24,892,886	- - - - - - - - -	14988	24,892,773 – 24,892,886	+	5	120	82.21	-2.06	0.54	0.560531
9364	3R_DroMel_CAF1	24,893,032 – 24,893,145	- - - - - - - - -	14989	24,893,032 – 24,893,145	-	5	119	91.14	-3.01	0.76	0.980274
9365	3R_DroMel_CAF1	24,893,368 – 24,893,473	- - - - - - - - -	14990	24,893,368 – 24,893,473	+	5	106	98.10	-1.46	0.95	0.909679
9366	3R_DroMel_CAF1	24,895,509 – 24,895,628	- - - - - - - - -	14991	24,895,509 – 24,895,628	-	5	119	97.96	-1.34	0.99	0.883948
9367	3R_DroMel_CAF1	24,896,208 – 24,896,324	- - - - - - - - -	14992	24,896,208 – 24,896,324	-	5	120	93.71	-1.60	0.84	0.860208
9368	3R_DroMel_CAF1	24,896,400 – 24,896,544	- - - - - - - - -	14993	24,896,400 – 24,896,510	-	5	119	91.53	-1.29	0.82	0.509545
9368	3R_DroMel_CAF1	24,896,400 – 24,896,544	- - - - - - - - -	14994	24,896,433 – 24,896,544	+	5	113	93.90	-1.71	0.85	0.939879
9369	3R_DroMel_CAF1	24,897,510 – 24,897,618	- - - - - - - - -	14995	24,897,510 – 24,897,618	+	5	108	98.15	-1.53	0.93	0.916196
9370	3R_DroMel_CAF1	24,898,143 – 24,898,254	- - - - - - - - -	14996	24,898,143 – 24,898,254	-	5	111	94.59	-1.01	0.97	0.511698
9371	3R_DroMel_CAF1	24,898,465 – 24,898,570	- - - - - - - - -	14997	24,898,465 – 24,898,570	+	5	117	87.19	-1.51	0.82	0.623921
9372	3R_DroMel_CAF1	24,898,787 – 24,899,020	- - - - - - - - -	14998	24,898,787 – 24,898,907	+	5	120	92.92	-1.31	0.85	0.644141
				14999	24,898,867 – 24,898,980	+	5	113	95.66	-1.39	0.91	0.876187
				15000	24,898,907 – 24,899,020	+	5	113	95.66	-1.17	0.90	0.562542
9373	3R_DroMel_CAF1	24,899,169 – 24,899,285	- - - - - - - - -	15001	24,899,169 – 24,899,285	-	5	120	83.76	-1.53	0.73	0.505087
9374	3R_DroMel_CAF1	24,899,599 – 24,899,719	- - - - - - - - -	15002	24,899,599 – 24,899,719	+	5	120	94.33	-1.84	0.82	0.910171
9375	3R_DroMel_CAF1	24,899,795 – 24,899,886	- - - - - - - - -	15003	24,899,795 – 24,899,886	+	5	91	97.53	-3.31	0.91	0.999755
9376	3R_DroMel_CAF1	24,899,935 – 24,900,083	- - - - - - - - -	15004	24,899,935 – 24,900,043	+	4	112	95.66	-2.49	0.99	0.988724
				15005	24,899,935 – 24,900,043	-	4	112	95.66	-3.65	0.96	0.992084
				15006	24,899,964 – 24,900,083	+	5	120	97.99	-1.30	0.92	0.658075
				15007	24,899,964 – 24,900,083	-	5	120	97.99	-2.24	0.92	0.996848
9377	3R_DroMel_CAF1	24,900,303 – 24,900,420	- - - - - - - - -	15008	24,900,303 – 24,900,420	-	4	119	88.28	-1.70	0.85	0.793005
9378	3R_DroMel_CAF1	24,900,953 – 24,901,067	- - - - - - - - -	15009	24,900,953 – 24,901,067	+	6	119	75.55	-1.96	0.58	0.931973
9379	3R_DroMel_CAF1	24,902,472 – 24,902,567	- - - - - - - - -	15010	24,902,472 – 24,902,567	+	5	95	94.74	-1.17	0.97	0.799697
9379	3R_DroMel_CAF1	24,902,472 – 24,902,567	- - - - - - - - -	15011	24,902,472 – 24,902,567	-	5	95	94.74	-1.58	0.96	0.989558
9380	3R_DroMel_CAF1	24,903,085 – 24,903,284	- - - - - - - - -	15012	24,903,085 – 24,903,204	+	5	120	93.38	-1.62	0.83	0.857886
				15013	24,903,124 – 24,903,244	+	5	120	86.84	-1.83	0.72	0.678004
				15014	24,903,164 – 24,903,284	+	5	120	89.06	-1.85	0.74	0.693789
				15015	24,903,164 – 24,903,284	-	5	120	89.06	-1.55	0.79	0.641701
9381	3R_DroMel_CAF1	24,903,382 – 24,903,542	- - - - - - - - -	15016	24,903,382 – 24,903,502	-	5	120	97.83	-1.79	0.88	0.939410
9381	3R_DroMel_CAF1	24,903,382 – 24,903,542	- - - - - - - - -	15017	24,903,422 – 24,903,542	-	5	120	97.00	-1.93	0.82	0.858568
9382	3R_DroMel_CAF1	24,904,456 – 24,904,552	- - - - - - - - -	15018	24,904,456 – 24,904,552	+	5	120	73.67	-1.49	0.67	0.802223
9383	3R_DroMel_CAF1	24,906,922 – 24,907,088	- - - - - - - - -	15019	24,906,922 – 24,907,030	+	5	115	92.70	-1.36	0.84	0.662486
				15020	24,906,955 – 24,907,053	+	5	98	97.76	-1.71	0.99	0.991798
				15021	24,906,955 – 24,907,053	-	5	98	97.76	-1.12	0.96	0.525636
				15022	24,906,993 – 24,907,088	+	5	95	98.74	-1.23	1.00	0.696940
9384	3R_DroMel_CAF1	24,908,432 – 24,908,550	- - - - - - - - -	15023	24,908,432 – 24,908,525	-	4	95	87.15	-1.74	0.70	0.654548
				15024	24,908,452 – 24,908,550	+	5	105	92.46	-1.54	0.86	0.877148
				15025	24,908,452 – 24,908,550	-	5	105	92.46	-2.61	0.88	0.999539
9385	3R_DroMel_CAF1	24,909,412 – 24,909,510	- - - - - - - - -	15026	24,909,412 – 24,909,510	-	5	98	91.71	-1.69	0.94	0.989332
9386	3R_DroMel_CAF1	24,909,841 – 24,909,998	- - - - - - - - -	15027	24,909,841 – 24,909,960	-	5	119	99.16	-1.49	1.01	0.923773
9386	3R_DroMel_CAF1	24,909,841 – 24,909,998	- - - - - - - - -	15028	24,909,881 – 24,909,998	-	5	119	93.82	-1.86	0.90	0.994021
9387	3R_DroMel_CAF1	24,910,105 – 24,910,255	- - - - - - - - -	15029	24,910,105 – 24,910,222	-	5	120	95.80	-1.90	0.91	0.994005
9387	3R_DroMel_CAF1	24,910,105 – 24,910,255	- - - - - - - - -	15030	24,910,145 – 24,910,255	-	5	120	93.73	-1.54	0.84	0.845000
9388	3R_DroMel_CAF1	24,910,571 – 24,910,691	- - - - - - - - -	15031	24,910,571 – 24,910,691	-	5	120	92.42	-1.77	0.80	0.844708
9389	3R_DroMel_CAF1	24,910,841 – 24,910,978	- - - - - - - - -	15032	24,910,841 – 24,910,940	+	5	103	95.48	-1.99	0.96	0.999128
				15033	24,910,841 – 24,910,940	-	5	103	95.48	-3.38	0.99	0.999992
				15034	24,910,869 – 24,910,978	-	5	115	94.43	-1.08	0.92	0.500000
9390	3R_DroMel_CAF1	24,911,719 – 24,911,832	- - - - - - - - -	15035	24,911,719 – 24,911,832	-	5	119	81.13	-3.07	0.44	0.972919
9391	3R_DroMel_CAF1	24,911,907 – 24,912,019	- - - - - - - - -	15036	24,911,907 – 24,912,019	+	4	120	88.75	-3.59	0.94	0.998686
9391	3R_DroMel_CAF1	24,911,907 – 24,912,019	- - - - - - - - -	15037	24,911,907 – 24,912,019	-	4	120	88.75	-2.01	0.90	0.953041
9392	3R_DroMel_CAF1	24,913,153 – 24,913,269	- - - - - - - - -	15038	24,913,153 – 24,913,269	-	4	116	97.70	-2.06	0.91	0.794807
9393	3R_DroMel_CAF1	24,914,909 – 24,915,061	- - - - - - - - -	15039	24,914,909 – 24,915,025	-	4	120	90.38	-2.21	0.82	0.929977
9393	3R_DroMel_CAF1	24,914,909 – 24,915,061	- - - - - - - - -	15040	24,914,949 – 24,915,061	-	4	116	92.64	-1.80	0.99	0.952306
9394	3R_DroMel_CAF1	24,915,753 – 24,915,872	- - - - - - - - -	15041	24,915,753 – 24,915,872	-	4	119	96.64	-1.60	0.92	0.596507
9395	3R_DroMel_CAF1	24,915,978 – 24,916,207	- - - - - - - - -	15042	24,915,978 – 24,916,088	-	4	120	91.98	-2.06	0.85	0.913405
				15043	24,916,017 – 24,916,127	+	4	120	91.98	-2.49	0.94	0.992478
				15044	24,916,017 – 24,916,127	-	4	120	91.98	-2.90	0.88	0.989233
				15045	24,916,048 – 24,916,167	+	4	120	95.51	-2.91	0.96	0.992427
				15046	24,916,048 – 24,916,167	-	4	120	95.51	-3.65	0.98	0.994071
				15047	24,916,088 – 24,916,207	+	4	120	94.67	-3.35	0.90	0.985890
				15048	24,916,088 – 24,916,207	-	4	120	94.67	-2.92	0.91	0.986854
9396	3R_DroMel_CAF1	24,916,404 – 24,916,524	- - - - - - - - -	15049	24,916,404 – 24,916,524	+	4	120	95.08	-1.52	0.95	0.705991
9397	3R_DroMel_CAF1	24,917,577 – 24,917,720	- - - - - - - - -	15050	24,917,577 – 24,917,683	-	5	113	93.95	-1.56	0.78	0.517816
9397	3R_DroMel_CAF1	24,917,577 – 24,917,720	- - - - - - - - -	15051	24,917,610 – 24,917,720	-	5	110	98.91	-1.61	0.97	0.951133
9398	3R_DroMel_CAF1	24,917,740 – 24,917,855	- - - - - - - - -	15052	24,917,740 – 24,917,855	-	5	115	92.70	-1.59	0.90	0.965818
9399	3R_DroMel_CAF1	24,918,086 – 24,918,246	- - - - - - - - -	15053	24,918,086 – 24,918,206	+	5	120	95.25	-1.62	0.79	0.516401
				15054	24,918,086 – 24,918,206	-	5	120	95.25	-1.80	0.77	0.529631
				15055	24,918,126 – 24,918,246	+	5	120	94.17	-2.15	0.78	0.893504
9400	3R_DroMel_CAF1	24,918,574 – 24,918,679	- - - - - - - - -	15056	24,918,574 – 24,918,679	+	5	108	87.81	-1.69	0.72	0.572254
9401	3R_DroMel_CAF1	24,918,871 – 24,919,028	- - - - - - - - -	15057	24,918,871 – 24,918,970	+	5	105	87.19	-1.91	0.75	0.777170
9401	3R_DroMel_CAF1	24,918,871 – 24,919,028	- - - - - - - - -	15058	24,918,930 – 24,919,028	+	5	110	89.77	-1.75	0.88	0.958632
9402	3R_DroMel_CAF1	24,919,322 – 24,919,412	- - - - - - - - -	15059	24,919,322 – 24,919,412	+	3	99	91.25	-1.15	1.00	0.618043
9403	3R_DroMel_CAF1	24,919,483 – 24,919,578	- - - - - - - - -	15060	24,919,483 – 24,919,578	+	5	96	94.46	-1.54	0.81	0.679876
9404	3R_DroMel_CAF1	24,920,398 – 24,920,491	- - - - - - - - -	15061	24,920,398 – 24,920,491	+	5	93	98.71	-1.27	0.93	0.549359
9405	3R_DroMel_CAF1	24,921,144 – 24,921,621	- - "RNAmicro=f:24921334_t:24921453_strand:-_p:0.798181" - - - - - -	15062	24,921,144 – 24,921,254	+	5	120	85.74	-2.04	0.66	0.656415
				15063	24,921,214 – 24,921,334	-	5	120	94.41	-1.08	0.93	0.538885
				15064	24,921,254 – 24,921,374	-	5	120	95.66	-1.25	0.92	0.768083
				15065	24,921,334 – 24,921,454	+	5	120	92.66	-3.72	0.84	0.999689
				15066	24,921,334 – 24,921,454	-	5	120	92.66	-3.23	0.85	0.999613
				15067	24,921,374 – 24,921,488	-	4	114	90.35	-1.95	0.79	0.822725
				15068	24,921,414 – 24,921,520	-	4	109	91.71	-1.44	0.91	0.671747
				15069	24,921,520 – 24,921,621	+	5	101	99.01	-1.82	0.96	0.984172
9406	3R_DroMel_CAF1	24,922,880 – 24,922,991	- - - - - - - - -	15070	24,922,880 – 24,922,991	-	5	117	95.87	-1.30	0.95	0.873773
9407	3R_DroMel_CAF1	24,923,522 – 24,923,616	- - - - - - - - -	15071	24,923,522 – 24,923,616	-	6	94	78.25	-1.28	0.64	0.524307
9408	3R_DroMel_CAF1	24,924,540 – 24,924,660	- - - "knownCDS=Parent=FBtr0085365;Name=CG11873-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11873-RA" - - - - -	15072	24,924,540 – 24,924,660	-	6	120	79.29	-1.91	0.61	0.805162
9409	3R_DroMel_CAF1	24,924,824 – 24,924,997	- - - "knownCDS=Parent=FBtr0085365;Name=CG11873-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11873-RA" - - - - -	15073	24,924,824 – 24,924,933	+	6	120	78.48	-1.98	0.74	0.943519
				15074	24,924,824 – 24,924,933	-	6	120	78.48	-2.16	0.60	0.920097
				15075	24,924,904 – 24,924,997	+	6	96	80.87	-3.23	0.48	0.907565
				15076	24,924,904 – 24,924,997	-	6	96	80.87	-1.90	0.74	0.849486
9410	3R_DroMel_CAF1	24,927,500 – 24,927,604	- - - "knownCDS=Parent=FBtr0085365;Name=CG11873-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11873-RA" - - - - -	15077	24,927,500 – 24,927,604	-	6	110	82.64	-1.42	0.73	0.528737
9411	3R_DroMel_CAF1	24,927,811 – 24,927,913	- - - "knownCDS=Parent=FBtr0085365;Name=CG11873-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11873-RA" - - - - -	15078	24,927,811 – 24,927,913	-	6	105	82.59	-1.79	0.67	0.597661
9412	3R_DroMel_CAF1	24,930,195 – 24,930,324	- - - "knownCDS=Parent=FBtr0085365;Name=CG11873-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11873-RA" - - - - -	15079	24,930,195 – 24,930,296	-	6	108	77.66	-2.96	0.72	0.985676
9412	3R_DroMel_CAF1	24,930,195 – 24,930,324		15080	24,930,223 – 24,930,324	-	6	120	78.70	-2.41	0.69	0.964979
9413	3R_DroMel_CAF1	24,930,892 – 24,931,080	- - - "knownCDS=Parent=FBtr0085365;Name=CG11873-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11873-RA" - - - - -	15081	24,930,892 – 24,930,984	+	5	92	90.65	-2.93	0.84	0.999002
9413	3R_DroMel_CAF1	24,930,892 – 24,931,080		15082	24,930,984 – 24,931,080	+	5	99	88.27	-2.08	0.68	0.598731
9414	3R_DroMel_CAF1	24,932,028 – 24,932,138	- - - "knownCDS=Parent=FBtr0085365;Name=CG11873-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11873-RA" - - - - -	15083	24,932,028 – 24,932,138	+	6	113	80.22	-1.83	0.58	0.604341
9415	3R_DroMel_CAF1	24,938,690 – 24,938,796	- - - - - - - - -	15084	24,938,690 – 24,938,796	-	5	118	80.51	-1.93	0.59	0.703863
9416	3R_DroMel_CAF1	24,942,034 – 24,942,125	- - - - - - - - -	15085	24,942,034 – 24,942,125	+	5	91	92.53	-2.12	0.73	0.629991
9416	3R_DroMel_CAF1	24,942,034 – 24,942,125	- - - - - - - - -	15086	24,942,034 – 24,942,125	-	5	91	92.53	-3.38	0.84	0.999490
9417	3R_DroMel_CAF1	24,942,676 – 24,942,796	- - - "knownCDS=Parent=FBtr0085370;Name=CG11877-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11877-RA" - - - - -	15087	24,942,676 – 24,942,796	-	6	120	77.50	-2.13	0.47	0.729216
9418	3R_DroMel_CAF1	24,943,275 – 24,943,395	- - - "knownCDS=Parent=FBtr0085370;Name=CG11877-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11877-RA" - - - - -	15088	24,943,275 – 24,943,395	+	6	120	81.61	-1.48	0.65	0.517101
9419	3R_DroMel_CAF1	24,944,496 – 24,944,628	- - - - - - - - -	15089	24,944,496 – 24,944,597	-	6	109	70.74	-2.34	0.47	0.987070
9419	3R_DroMel_CAF1	24,944,496 – 24,944,628	- - - - - - - - -	15090	24,944,534 – 24,944,628	-	6	103	71.35	-2.01	0.58	0.977242
9420	3R_DroMel_CAF1	24,950,871 – 24,950,972	- - - - - - - - -	15091	24,950,871 – 24,950,972	+	5	102	80.97	-2.00	0.65	0.826689
9421	3R_DroMel_CAF1	24,951,349 – 24,951,465	- - - "knownCDS=Parent=FBtr0085371, FBtr0085372;Name=CG11880-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11880-RA, FlyBase+Annotation+IDs:CG11880-RB" - - - - -	15092	24,951,349 – 24,951,465	-	6	117	75.70	-1.62	0.55	0.633892
9422	3R_DroMel_CAF1	24,957,395 – 24,957,497	- - - - - - - - -	15093	24,957,395 – 24,957,497	+	6	120	77.16	-1.42	0.62	0.622448
9423	3R_DroMel_CAF1	24,963,822 – 24,963,942	- - - "knownCDS=Parent=FBtr0085413;Name=CG14512-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14512-RA" - - - - -	15094	24,963,822 – 24,963,942	-	6	120	72.39	-2.04	0.39	0.799326
9424	3R_DroMel_CAF1	24,970,880 – 24,970,980	- - - - - - - - -	15095	24,970,880 – 24,970,980	+	6	108	72.18	-1.70	0.48	0.645870
9425	3R_DroMel_CAF1	24,974,500 – 24,974,682	- - - - - - - - -	15096	24,974,500 – 24,974,604	+	4	120	74.63	-2.49	0.46	0.879754
				15097	24,974,539 – 24,974,644	+	4	120	81.19	-1.75	0.77	0.778701
				15098	24,974,564 – 24,974,682	-	5	118	83.43	-1.92	0.63	0.630361
9426	3R_DroMel_CAF1	24,974,872 – 24,974,992	- - - "knownCDS=Parent=FBtr0085384;Name=Pglym78-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1721-RA" - - - - -	15099	24,974,872 – 24,974,992	+	6	120	85.72	-2.06	0.82	0.743832
9427	3R_DroMel_CAF1	24,975,253 – 24,975,489	- - - "knownCDS=Parent=FBtr0100482, FBtr0100483;Name=Pglym78-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1721-RB, FlyBase+Annotation+IDs:CG1721-RC" - - - - -	15100	24,975,253 – 24,975,345	+	6	100	77.33	-1.66	0.73	0.929671
				15101	24,975,253 – 24,975,345	-	6	100	77.33	-1.50	0.65	0.796280
				15102	24,975,274 – 24,975,382	+	6	117	74.37	-1.24	0.74	0.899032
				15103	24,975,382 – 24,975,489	+	6	119	75.32	-1.26	0.78	0.919263
9428	3R_DroMel_CAF1	24,975,648 – 24,975,752	- - - "knownCDS=Parent=FBtr0085410;Name=ligatin-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31426-RA" - - - - -	15104	24,975,648 – 24,975,752	-	6	118	78.31	-1.36	0.67	0.703714
9429	3R_DroMel_CAF1	24,982,189 – 24,982,429	- - - "knownCDS=Parent=FBtr0085385;Name=Rpn2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11888-RA" - - - - -	15105	24,982,189 – 24,982,309	-	3	120	96.67	-1.40	0.97	0.500000
9429	3R_DroMel_CAF1	24,982,189 – 24,982,429		15106	24,982,309 – 24,982,429	-	3	120	95.56	-1.68	0.98	0.761039
9430	3R_DroMel_CAF1	24,982,629 – 24,982,749	- - - "knownCDS=Parent=FBtr0085385;Name=Rpn2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11888-RA" - - - - -	15107	24,982,629 – 24,982,749	+	3	120	96.67	-1.27	1.01	0.500000
9431	3R_DroMel_CAF1	24,985,232 – 24,985,331	- - - - - - - - -	15108	24,985,232 – 24,985,331	+	5	99	90.91	-1.61	0.75	0.542910
9432	3R_DroMel_CAF1	24,988,752 – 24,988,868	- - - - - - - - -	15109	24,988,752 – 24,988,868	-	3	116	80.35	-2.21	0.60	0.755707
9433	3R_DroMel_CAF1	24,997,989 – 24,998,085	- - - - - - - - -	15110	24,997,989 – 24,998,085	-	6	110	79.61	-1.24	0.71	0.627555
9434	3R_DroMel_CAF1	24,998,175 – 24,998,277	- - - - - - - - -	15111	24,998,175 – 24,998,277	-	6	109	77.55	-1.24	0.73	0.775890
9435	3R_DroMel_CAF1	24,998,509 – 24,998,625	- - - - - - - - -	15112	24,998,509 – 24,998,606	-	6	100	82.92	-1.32	0.90	0.584206
9435	3R_DroMel_CAF1	24,998,509 – 24,998,625	- - - - - - - - -	15113	24,998,534 – 24,998,625	-	6	108	76.88	-2.30	0.71	0.980815
9436	3R_DroMel_CAF1	25,001,064 – 25,001,157	- - - - - - - - -	15114	25,001,064 – 25,001,157	-	6	113	75.43	-1.31	0.65	0.739555
9437	3R_DroMel_CAF1	25,003,075 – 25,003,166	- - - - - - - - -	15115	25,003,075 – 25,003,166	-	6	116	83.84	-1.42	0.95	0.754254
9438	3R_DroMel_CAF1	25,005,605 – 25,005,712	- - - - - - - - -	15116	25,005,605 – 25,005,712	+	3	107	92.83	-2.28	0.83	0.711458
9439	3R_DroMel_CAF1	25,006,329 – 25,006,429	- - - - - - - - -	15117	25,006,329 – 25,006,429	+	5	101	81.36	-1.82	0.58	0.525030
9440	3R_DroMel_CAF1	25,007,025 – 25,007,164	- - - - - - - - -	15118	25,007,025 – 25,007,127	+	5	102	97.06	-1.87	0.82	0.809205
9440	3R_DroMel_CAF1	25,007,025 – 25,007,164	- - - - - - - - -	15119	25,007,053 – 25,007,164	-	5	111	98.02	-1.35	0.96	0.850991
9441	3R_DroMel_CAF1	25,008,542 – 25,008,691	- - - - - - - - -	15120	25,008,542 – 25,008,651	-	5	110	92.80	-2.06	0.81	0.958487
9441	3R_DroMel_CAF1	25,008,542 – 25,008,691	- - - - - - - - -	15121	25,008,572 – 25,008,691	-	5	120	92.56	-2.21	0.73	0.726425
9442	3R_DroMel_CAF1	25,008,728 – 25,008,818	- - - - - - - - -	15122	25,008,728 – 25,008,818	+	4	119	78.15	-1.55	0.70	0.577779
9443	3R_DroMel_CAF1	25,010,384 – 25,010,491	- - - - - - - - -	15123	25,010,384 – 25,010,491	+	6	107	76.03	-2.32	0.45	0.902584
9444	3R_DroMel_CAF1	25,012,145 – 25,012,264	- - - - - - - - -	15124	25,012,145 – 25,012,264	-	3	119	85.43	-2.43	0.76	0.858017
9445	3R_DroMel_CAF1	25,012,649 – 25,012,780	- - - - - - - - -	15125	25,012,649 – 25,012,756	+	5	120	82.98	-3.38	0.54	0.976707
9445	3R_DroMel_CAF1	25,012,649 – 25,012,780	- - - - - - - - -	15126	25,012,688 – 25,012,780	+	4	110	80.46	-2.41	0.49	0.528652
9446	3R_DroMel_CAF1	25,015,677 – 25,015,770	- - - - - - - - -	15127	25,015,677 – 25,015,770	+	4	96	86.10	-1.42	0.77	0.533463
9447	3R_DroMel_CAF1	25,018,254 – 25,018,349	- - - - - - - - -	15128	25,018,254 – 25,018,349	+	5	97	76.42	-1.97	0.49	0.796587
9447	3R_DroMel_CAF1	25,018,254 – 25,018,349	- - - - - - - - -	15129	25,018,254 – 25,018,349	-	5	97	76.42	-2.14	0.62	0.967583
9448	3R_DroMel_CAF1	25,018,987 – 25,019,090	- - - - - - - - -	15130	25,018,987 – 25,019,090	-	4	111	90.43	-1.44	0.78	0.506383
9449	3R_DroMel_CAF1	25,023,114 – 25,023,214	- - - - - - - - -	15131	25,023,114 – 25,023,214	-	5	117	71.43	-1.71	0.70	0.976525
9450	3R_DroMel_CAF1	25,031,364 – 25,031,481	- - - - - - - - -	15132	25,031,364 – 25,031,481	-	5	120	71.21	-2.26	0.35	0.981576
9451	3R_DroMel_CAF1	25,032,188 – 25,032,288	- - - - - - - - -	15133	25,032,188 – 25,032,288	+	5	103	85.73	-1.76	0.69	0.586730
9452	3R_DroMel_CAF1	25,033,464 – 25,033,555	- - - - - - - - -	15134	25,033,464 – 25,033,555	+	5	108	83.69	-2.90	0.82	0.996296
9452	3R_DroMel_CAF1	25,033,464 – 25,033,555	- - - - - - - - -	15135	25,033,464 – 25,033,555	-	5	108	83.69	-1.58	0.93	0.765512
9453	3R_DroMel_CAF1	25,034,273 – 25,034,400	- - - - - - - - -	15136	25,034,273 – 25,034,371	+	3	98	78.49	-3.57	0.80	0.999688
				15137	25,034,273 – 25,034,371	-	3	98	78.49	-4.15	0.59	0.998561
				15138	25,034,297 – 25,034,400	-	5	110	82.35	-2.43	0.50	0.746398
9454	3R_DroMel_CAF1	25,037,694 – 25,037,794	- - - - - - - - -	15139	25,037,694 – 25,037,794	-	5	100	83.49	-1.69	0.65	0.500000
9455	3R_DroMel_CAF1	25,038,039 – 25,038,130	- - - - - - - - -	15140	25,038,039 – 25,038,130	-	5	91	98.68	-1.33	1.00	0.824527
9456	3R_DroMel_CAF1	25,039,465 – 25,039,565	- - - - - - - - -	15141	25,039,465 – 25,039,565	+	4	100	87.33	-2.14	0.80	0.922768
9456	3R_DroMel_CAF1	25,039,465 – 25,039,565	- - - - - - - - -	15142	25,039,465 – 25,039,565	-	4	100	87.33	-1.93	0.77	0.829419
9457	3R_DroMel_CAF1	25,041,289 – 25,041,418	"known=stem_loop ID=Dmel\CG_RFAM_MIR_48002348;Name=dme-mir-279" - "RNAmicro=f:25041317_t:25041433_strand:-_p:0.984654" - - - "miRBase=dme-mir-279\|6e-53" - "Flybase=FBgn0067714:mir-279:microRNA_encoding_gene\|9e-07"	15143	25,041,289 – 25,041,396	+	6	108	78.29	-2.42	0.80	0.971498
				15144	25,041,289 – 25,041,396	-	6	108	78.29	-1.52	0.77	0.886094
				15145	25,041,317 – 25,041,418	+	6	117	84.61	-4.35	0.95	0.997112
				15146	25,041,317 – 25,041,418	-	6	117	84.61	-2.29	0.82	0.841237
9458	3R_DroMel_CAF1	25,042,055 – 25,042,155	- - - - - - - - -	15147	25,042,055 – 25,042,155	-	6	109	78.02	-1.88	0.61	0.866395
9459	3R_DroMel_CAF1	25,042,898 – 25,043,016	- - "RNAmicro=f:25042898_t:25043017_strand:+_p:0.691000" - - - - - -	15148	25,042,898 – 25,042,998	+	6	120	89.33	-1.88	0.94	0.987765
				15149	25,042,898 – 25,042,998	-	6	120	89.33	-3.03	0.95	0.999729
				15150	25,042,919 – 25,043,016	+	6	116	86.92	-1.89	0.93	0.958168
				15151	25,042,919 – 25,043,016	-	6	116	86.92	-2.01	0.88	0.908733
9460	3R_DroMel_CAF1	25,044,223 – 25,044,319	- - - "knownCDS=Parent=FBtr0085391;Name=CG31044-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31044-RA" - - - - -	15152	25,044,223 – 25,044,319	+	5	96	91.12	-1.60	0.90	0.956106
9461	3R_DroMel_CAF1	25,046,456 – 25,046,613	- - - "knownCDS=Parent=FBtr0085392, FBtr0085393;Name=Ef1gamma-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11901-RB, FlyBase+Annotation+IDs:CG11901-RA" - - - - -	15153	25,046,456 – 25,046,574	-	6	120	81.12	-2.60	0.64	0.898644
				15154	25,046,496 – 25,046,613	+	6	120	80.11	-1.58	0.60	0.537498
				15155	25,046,496 – 25,046,613	-	6	120	80.11	-2.22	0.57	0.799068
9462	3R_DroMel_CAF1	25,049,396 – 25,049,489	- - - "knownCDS=Parent=FBtr0085394;Name=Brd8-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14514-RA" - - - - -	15156	25,049,396 – 25,049,489	+	6	105	76.99	-1.32	0.73	0.852100
9463	3R_DroMel_CAF1	25,052,585 – 25,052,684	- - - - - - - - -	15157	25,052,585 – 25,052,684	+	6	99	82.89	-1.75	0.68	0.568084
9464	3R_DroMel_CAF1	25,053,506 – 25,053,623	- - - - - - - - -	15158	25,053,506 – 25,053,623	+	3	120	88.80	-2.97	0.77	0.877359
9464	3R_DroMel_CAF1	25,053,506 – 25,053,623	- - - - - - - - -	15159	25,053,506 – 25,053,623	-	3	120	88.80	-2.05	0.82	0.665785
9465	3R_DroMel_CAF1	25,053,918 – 25,054,038	- - - - - - - - -	15160	25,053,918 – 25,054,038	+	3	120	94.44	-2.10	0.91	0.814283
9465	3R_DroMel_CAF1	25,053,918 – 25,054,038	- - - - - - - - -	15161	25,053,918 – 25,054,038	-	3	120	94.44	-1.80	0.96	0.813237
9466	3R_DroMel_CAF1	25,054,461 – 25,054,571	- - - - - - - - -	15162	25,054,461 – 25,054,571	+	3	120	81.71	-2.24	0.59	0.593505
9467	3R_DroMel_CAF1	25,055,865 – 25,056,024	- - - - - - - - -	15163	25,055,865 – 25,055,985	-	3	120	97.50	-1.45	0.98	0.558266
9467	3R_DroMel_CAF1	25,055,865 – 25,056,024	- - - - - - - - -	15164	25,055,905 – 25,056,024	-	3	120	94.71	-1.71	0.93	0.656880
9468	3R_DroMel_CAF1	25,056,880 – 25,056,984	- - - "knownCDS=Parent=FBtr0085396;Name=CG15817-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15817-RA" - - - - -	15165	25,056,880 – 25,056,984	+	6	114	73.98	-2.20	0.50	0.960338
9469	3R_DroMel_CAF1	25,059,227 – 25,059,341	- - - "knownCDS=Parent=FBtr0085396;Name=CG15817-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15817-RA" - - - - -	15166	25,059,227 – 25,059,341	+	6	120	79.97	-2.61	0.52	0.879084
9469	3R_DroMel_CAF1	25,059,227 – 25,059,341		15167	25,059,227 – 25,059,341	-	6	120	79.97	-2.05	0.52	0.576490
9470	3R_DroMel_CAF1	25,060,297 – 25,060,437	- - - - - - - - -	15168	25,060,297 – 25,060,399	+	6	120	81.40	-2.88	0.61	0.903870
9470	3R_DroMel_CAF1	25,060,297 – 25,060,437	- - - - - - - - -	15169	25,060,333 – 25,060,437	+	6	118	83.05	-1.93	0.64	0.515874
9471	3R_DroMel_CAF1	25,061,680 – 25,061,800	- - - "knownCDS=Parent=FBtr0085403;Name=CG11951-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11951-RA" - - - - -	15170	25,061,680 – 25,061,800	+	5	120	89.25	-1.64	0.84	0.859449
9472	3R_DroMel_CAF1	25,062,602 – 25,062,722	- - - "knownCDS=Parent=FBtr0085403;Name=CG11951-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11951-RA" - - - - -	15171	25,062,602 – 25,062,722	+	5	120	91.00	-2.00	0.75	0.795977
9472	3R_DroMel_CAF1	25,062,602 – 25,062,722		15172	25,062,602 – 25,062,722	-	5	120	91.00	-1.79	0.77	0.754809
9473	3R_DroMel_CAF1	25,070,814 – 25,070,917	- - - "knownCDS=Parent=FBtr0085399;Name=SP1029-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11956-RB" - - - - -	15173	25,070,814 – 25,070,917	+	6	113	74.86	-1.99	0.53	0.907530
9474	3R_DroMel_CAF1	25,074,350 – 25,074,476	- - - - - - - - -	15174	25,074,350 – 25,074,459	-	5	111	91.65	-2.53	0.81	0.992404
9474	3R_DroMel_CAF1	25,074,350 – 25,074,476	- - - - - - - - -	15175	25,074,381 – 25,074,476	-	5	95	96.84	-1.27	0.88	0.524174
9475	3R_DroMel_CAF1	25,075,490 – 25,075,610	- - - - - - - - -	15176	25,075,490 – 25,075,610	-	5	120	73.72	-1.63	0.20	0.662123
9476	3R_DroMel_CAF1	25,076,963 – 25,077,073	- - - - - - - - -	15177	25,076,963 – 25,077,073	-	6	117	74.72	-2.44	0.51	0.982885
9477	3R_DroMel_CAF1	25,077,322 – 25,077,422	- - - - - - - - -	15178	25,077,322 – 25,077,422	+	5	100	81.18	-1.69	0.63	0.539500
9478	3R_DroMel_CAF1	25,083,152 – 25,083,260	- - - - - - - - -	15179	25,083,152 – 25,083,260	+	6	110	83.66	-2.65	0.78	0.876978
9479	3R_DroMel_CAF1	25,087,259 – 25,087,352	- - - - - - - - -	15180	25,087,259 – 25,087,352	-	3	102	91.92	-1.87	0.95	0.863888
9480	3R_DroMel_CAF1	25,088,727 – 25,088,877	- - - - - - - - -	15181	25,088,727 – 25,088,817	-	6	112	84.35	-1.76	0.78	0.588340
9480	3R_DroMel_CAF1	25,088,727 – 25,088,877	- - - - - - - - -	15182	25,088,781 – 25,088,877	+	6	120	78.67	-2.04	0.50	0.640292
9481	3R_DroMel_CAF1	25,090,473 – 25,090,600	- - "RNAmicro=f:25090508_t:25090621_strand:+_p:0.547553" - - - - - -	15183	25,090,473 – 25,090,564	+	5	109	88.68	-2.36	0.72	0.862256
9481	3R_DroMel_CAF1	25,090,473 – 25,090,600		15184	25,090,508 – 25,090,600	+	5	114	84.97	-1.84	0.75	0.760623
9482	3R_DroMel_CAF1	25,092,055 – 25,092,145	- - - - - - - - -	15185	25,092,055 – 25,092,145	-	6	98	82.54	-2.48	0.55	0.548545
9483	3R_DroMel_CAF1	25,093,724 – 25,093,814	- - - - - - - - -	15186	25,093,724 – 25,093,814	-	6	116	71.25	-2.15	0.29	0.691174
9484	3R_DroMel_CAF1	25,094,181 – 25,094,290	- - - - - - - - -	15187	25,094,181 – 25,094,290	-	4	113	80.97	-2.42	0.56	0.837258
9485	3R_DroMel_CAF1	25,094,777 – 25,094,921	- - - - - - - - -	15188	25,094,777 – 25,094,884	-	5	113	83.17	-1.67	0.65	0.500000
9485	3R_DroMel_CAF1	25,094,777 – 25,094,921	- - - - - - - - -	15189	25,094,806 – 25,094,921	+	6	120	84.17	-2.36	0.65	0.515116
9486	3R_DroMel_CAF1	25,095,357 – 25,095,458	- - - - - - - - -	15190	25,095,357 – 25,095,458	-	3	101	97.34	-1.53	1.00	0.682060
9487	3R_DroMel_CAF1	25,095,859 – 25,095,949	- - - - - - - - -	15191	25,095,859 – 25,095,949	-	6	113	77.00	-1.78	0.55	0.735561
9488	3R_DroMel_CAF1	25,096,436 – 25,096,533	- - - - - - - - -	15192	25,096,436 – 25,096,533	-	6	98	80.99	-2.52	0.73	0.925996
9489	3R_DroMel_CAF1	25,096,908 – 25,096,999	- - - - - - - - -	15193	25,096,908 – 25,096,999	-	6	106	78.75	-1.33	0.65	0.604564
9490	3R_DroMel_CAF1	25,099,160 – 25,099,262	- - - - - - - - -	15194	25,099,160 – 25,099,262	+	6	103	82.03	-2.51	0.61	0.768184
9490	3R_DroMel_CAF1	25,099,160 – 25,099,262	- - - - - - - - -	15195	25,099,160 – 25,099,262	-	6	103	82.03	-2.70	0.66	0.860661
9491	3R_DroMel_CAF1	25,103,046 – 25,103,136	- - - - - - - - -	15196	25,103,046 – 25,103,136	+	6	91	90.92	-2.98	0.83	0.969995
9492	3R_DroMel_CAF1	25,103,742 – 25,103,853	- - - - - - - - -	15197	25,103,742 – 25,103,853	-	6	117	82.28	-1.38	0.73	0.539773
9493	3R_DroMel_CAF1	25,105,008 – 25,105,129	- - - - - - - - -	15198	25,105,008 – 25,105,106	-	6	109	76.50	-1.13	0.66	0.537702
9493	3R_DroMel_CAF1	25,105,008 – 25,105,129	- - - - - - - - -	15199	25,105,039 – 25,105,129	-	6	101	75.99	-2.15	0.64	0.975474
9494	3R_DroMel_CAF1	25,105,255 – 25,105,359	- - - - - - - - -	15200	25,105,255 – 25,105,359	-	6	107	73.66	-2.98	0.30	0.982937
9495	3R_DroMel_CAF1	25,105,857 – 25,105,948	- - - - - - - - -	15201	25,105,857 – 25,105,948	+	5	104	90.85	-1.65	0.83	0.865076
9495	3R_DroMel_CAF1	25,105,857 – 25,105,948	- - - - - - - - -	15202	25,105,857 – 25,105,948	-	5	104	90.85	-1.06	0.97	0.500000
9496	3R_DroMel_CAF1	25,108,470 – 25,108,581	- - - - - - - - -	15203	25,108,470 – 25,108,581	+	6	120	78.48	-1.38	0.65	0.638921
9497	3R_DroMel_CAF1	25,110,632 – 25,110,728	- - - - - - - - -	15204	25,110,632 – 25,110,728	-	5	106	78.91	-1.75	0.56	0.528627
9498	3R_DroMel_CAF1	25,111,704 – 25,111,796	- - - - - - - - -	15205	25,111,704 – 25,111,796	-	6	98	91.97	-1.67	0.95	0.989669
9499	3R_DroMel_CAF1	25,111,943 – 25,112,034	- - - - - - - - -	15206	25,111,943 – 25,112,034	-	6	101	84.73	-2.67	0.79	0.850888
9500	3R_DroMel_CAF1	25,115,264 – 25,115,355	- - - - - - - - -	15207	25,115,264 – 25,115,355	-	6	110	81.09	-2.51	0.58	0.827937
9501	3R_DroMel_CAF1	25,115,489 – 25,115,586	- - - - - - - - -	15208	25,115,489 – 25,115,586	+	6	104	80.41	-3.99	0.72	0.972635
9501	3R_DroMel_CAF1	25,115,489 – 25,115,586	- - - - - - - - -	15209	25,115,489 – 25,115,586	-	6	104	80.41	-2.97	0.91	0.978245
9502	3R_DroMel_CAF1	25,117,404 – 25,117,587	- - - - - - - - -	15210	25,117,404 – 25,117,494	+	4	99	82.85	-2.78	0.53	0.755819
				15211	25,117,404 – 25,117,494	-	4	99	82.85	-2.30	0.65	0.901755
				15212	25,117,494 – 25,117,587	-	3	98	76.34	-1.42	0.64	0.500000
9503	3R_DroMel_CAF1	25,117,722 – 25,117,812	- - - - - - - - -	15213	25,117,722 – 25,117,812	-	5	99	80.61	-1.57	0.83	0.744537
9504	3R_DroMel_CAF1	25,118,747 – 25,118,843	- - - - - - - - -	15214	25,118,747 – 25,118,843	+	5	96	83.28	-2.35	0.57	0.738113
9504	3R_DroMel_CAF1	25,118,747 – 25,118,843	- - - - - - - - -	15215	25,118,747 – 25,118,843	-	5	96	83.28	-2.36	0.70	0.933895
9505	3R_DroMel_CAF1	25,118,883 – 25,118,992	- - - - - - - - -	15216	25,118,883 – 25,118,992	+	5	111	82.65	-1.58	0.69	0.515685
9506	3R_DroMel_CAF1	25,120,599 – 25,120,700	- - - - - - - - -	15217	25,120,599 – 25,120,700	-	5	105	71.70	-1.88	0.42	0.817349
9507	3R_DroMel_CAF1	25,121,978 – 25,122,098	- - - "knownCDS=Parent=FBtr0085439;Name=CG14506-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14506-RA" - - - - -	15218	25,121,978 – 25,122,098	+	5	120	84.17	-1.71	0.71	0.619614
9507	3R_DroMel_CAF1	25,121,978 – 25,122,098		15219	25,121,978 – 25,122,098	-	5	120	84.17	-1.69	0.72	0.618621
9508	3R_DroMel_CAF1	25,123,113 – 25,123,221	- - - - - - - - -	15220	25,123,113 – 25,123,221	+	6	108	79.32	-1.45	0.64	0.621287
9509	3R_DroMel_CAF1	25,131,567 – 25,131,676	- - - - - - - - -	15221	25,131,567 – 25,131,676	-	6	112	76.14	-1.22	0.70	0.778376
9510	3R_DroMel_CAF1	25,134,220 – 25,134,320	- - - - - - - - -	15222	25,134,220 – 25,134,320	-	3	109	86.85	-2.22	0.67	0.533999
9511	3R_DroMel_CAF1	25,134,403 – 25,134,504	- - - - - - - - -	15223	25,134,403 – 25,134,504	+	6	101	82.73	-2.07	0.64	0.607690
9512	3R_DroMel_CAF1	25,136,955 – 25,137,070	- - - - - - - - -	15224	25,136,955 – 25,137,070	+	6	117	80.66	-1.68	0.62	0.621513
9513	3R_DroMel_CAF1	25,145,333 – 25,145,426	- - - - - - - - -	15225	25,145,333 – 25,145,426	-	5	98	83.78	-2.11	0.69	0.829318
9514	3R_DroMel_CAF1	25,148,330 – 25,148,430	- - - - - - - - -	15226	25,148,330 – 25,148,430	+	6	120	81.07	-1.27	0.70	0.548074
9515	3R_DroMel_CAF1	25,148,638 – 25,148,770	- - - - - - - - -	15227	25,148,638 – 25,148,746	+	6	116	83.90	-1.54	0.78	0.529282
9515	3R_DroMel_CAF1	25,148,638 – 25,148,770	- - - - - - - - -	15228	25,148,668 – 25,148,770	+	6	116	84.75	-2.31	0.75	0.670138
9516	3R_DroMel_CAF1	25,148,796 – 25,148,886	- - - - - - - - -	15229	25,148,796 – 25,148,886	+	6	103	83.75	-2.04	0.73	0.652899
9517	3R_DroMel_CAF1	25,149,202 – 25,149,299	- - - - - - - - -	15230	25,149,202 – 25,149,299	-	6	120	79.06	-2.12	0.56	0.815603
9518	3R_DroMel_CAF1	25,156,031 – 25,156,131	- - - - - - - - -	15231	25,156,031 – 25,156,131	+	6	103	83.41	-1.15	0.96	0.515995
9519	3R_DroMel_CAF1	25,157,834 – 25,157,928	- - - - - - - - -	15232	25,157,834 – 25,157,928	+	6	104	70.68	-1.58	0.48	0.568599
9520	3R_DroMel_CAF1	25,158,538 – 25,158,638	- - - - - - - - -	15233	25,158,538 – 25,158,638	+	6	119	73.88	-1.71	0.67	0.956610
9521	3R_DroMel_CAF1	25,161,262 – 25,161,355	- - - - - - - - -	15234	25,161,262 – 25,161,355	+	5	94	91.22	-1.12	0.92	0.513159
9522	3R_DroMel_CAF1	25,163,873 – 25,163,968	- - - - - - - - -	15235	25,163,873 – 25,163,968	+	6	109	77.59	-2.32	0.45	0.813324
9522	3R_DroMel_CAF1	25,163,873 – 25,163,968	- - - - - - - - -	15236	25,163,873 – 25,163,968	-	6	109	77.59	-3.13	0.61	0.991805
9523	3R_DroMel_CAF1	25,166,435 – 25,166,529	- - - - - - - - -	15237	25,166,435 – 25,166,529	+	5	94	93.40	-2.02	0.78	0.849152
9523	3R_DroMel_CAF1	25,166,435 – 25,166,529	- - - - - - - - -	15238	25,166,435 – 25,166,529	-	5	94	93.40	-1.91	0.87	0.987118
9524	3R_DroMel_CAF1	25,168,867 – 25,168,964	- - - - - - - - -	15239	25,168,867 – 25,168,964	-	4	99	90.83	-2.01	0.79	0.830077
9525	3R_DroMel_CAF1	25,169,706 – 25,169,796	- - - - - - - - -	15240	25,169,706 – 25,169,796	-	6	98	88.43	-1.76	0.87	0.808804
9526	3R_DroMel_CAF1	25,174,895 – 25,174,999	- - - - - - - - -	15241	25,174,895 – 25,174,999	+	6	106	90.15	-3.28	0.88	0.997535
9526	3R_DroMel_CAF1	25,174,895 – 25,174,999	- - - - - - - - -	15242	25,174,895 – 25,174,999	-	6	106	90.15	-3.32	0.82	0.971589
9527	3R_DroMel_CAF1	25,178,603 – 25,178,710	- - - - - - - - -	15243	25,178,603 – 25,178,710	+	4	119	81.90	-1.78	0.66	0.670166
9528	3R_DroMel_CAF1	25,179,557 – 25,179,698	- - - - - - - - -	15244	25,179,557 – 25,179,666	+	6	116	74.19	-2.02	0.41	0.698720
9528	3R_DroMel_CAF1	25,179,557 – 25,179,698	- - - - - - - - -	15245	25,179,595 – 25,179,698	+	6	113	73.72	-2.03	0.52	0.933732
9529	3R_DroMel_CAF1	25,185,432 – 25,185,534	- - - - - - - - -	15246	25,185,432 – 25,185,534	-	6	117	75.59	-1.57	0.54	0.545539
9530	3R_DroMel_CAF1	25,186,140 – 25,186,231	- - - - - - - - -	15247	25,186,140 – 25,186,231	+	6	108	77.76	-2.13	0.64	0.950915
9531	3R_DroMel_CAF1	25,188,167 – 25,188,260	- - - - - - - - -	15248	25,188,167 – 25,188,260	+	6	100	80.34	-1.25	0.76	0.646966
9532	3R_DroMel_CAF1	25,190,745 – 25,190,836	- - - - - - - - -	15249	25,190,745 – 25,190,836	+	6	98	82.95	-1.46	0.74	0.532042
9533	3R_DroMel_CAF1	25,191,231 – 25,191,346	- - - - - - - - -	15250	25,191,231 – 25,191,346	+	5	120	74.96	-1.83	0.15	0.881990
9534	3R_DroMel_CAF1	25,192,363 – 25,192,453	- - - - - - - - -	15251	25,192,363 – 25,192,453	-	5	96	77.56	-0.88	0.92	0.781773
9535	3R_DroMel_CAF1	25,192,778 – 25,192,872	- - - - - - - - -	15252	25,192,778 – 25,192,872	+	6	120	76.58	-2.05	0.69	0.971361
9536	3R_DroMel_CAF1	25,195,875 – 25,195,965	- - - - - - - - -	15253	25,195,875 – 25,195,965	+	5	93	93.55	-1.57	0.85	0.872326
9537	3R_DroMel_CAF1	25,196,342 – 25,196,479	- - - - - - - - -	15254	25,196,342 – 25,196,440	-	6	120	75.12	-1.65	0.56	0.741004
				15255	25,196,382 – 25,196,479	+	6	102	80.15	-1.96	0.82	0.915419
				15256	25,196,382 – 25,196,479	-	6	102	80.15	-1.88	0.67	0.838742
9538	3R_DroMel_CAF1	25,196,720 – 25,196,812	- - - - - - - - -	15257	25,196,720 – 25,196,812	+	5	101	75.08	-2.29	0.37	0.975794
9539	3R_DroMel_CAF1	25,200,323 – 25,200,445	- - - - - - - - -	15258	25,200,323 – 25,200,423	+	6	111	81.23	-1.23	0.73	0.542772
				15259	25,200,352 – 25,200,445	+	6	98	74.74	-1.91	0.62	0.955298
				15260	25,200,352 – 25,200,445	-	6	98	74.74	-1.64	0.54	0.667874
9540	3R_DroMel_CAF1	25,203,123 – 25,203,217	- - - - - - - - -	15261	25,203,123 – 25,203,217	+	6	103	81.02	-2.12	0.69	0.858281
9541	3R_DroMel_CAF1	25,212,980 – 25,213,085	- - - - - - - - -	15262	25,212,980 – 25,213,085	+	5	113	82.44	-2.00	0.62	0.700073
9542	3R_DroMel_CAF1	25,213,582 – 25,213,686	- - - - - - - - -	15263	25,213,582 – 25,213,686	-	6	104	72.29	-2.42	0.42	0.980597
9543	3R_DroMel_CAF1	25,219,791 – 25,219,886	- - - - - - - - -	15264	25,219,791 – 25,219,886	+	5	109	76.01	-1.47	0.70	0.761069
9544	3R_DroMel_CAF1	25,220,200 – 25,220,332	- - - - - - - - -	15265	25,220,200 – 25,220,305	+	6	106	95.63	-1.33	0.90	0.799469
9544	3R_DroMel_CAF1	25,220,200 – 25,220,332	- - - - - - - - -	15266	25,220,239 – 25,220,332	+	6	117	81.25	-2.23	0.71	0.871783
9545	3R_DroMel_CAF1	25,221,384 – 25,221,486	- - - - - - - - -	15267	25,221,384 – 25,221,486	-	5	102	98.24	-1.55	0.93	0.907322
9546	3R_DroMel_CAF1	25,229,878 – 25,229,988	- - - - - - - - -	15268	25,229,878 – 25,229,988	+	3	113	83.69	-2.74	0.70	0.939596
9546	3R_DroMel_CAF1	25,229,878 – 25,229,988	- - - - - - - - -	15269	25,229,878 – 25,229,988	-	3	113	83.69	-3.20	0.71	0.976216
9547	3R_DroMel_CAF1	25,230,824 – 25,230,914	- - - - - - - - -	15270	25,230,824 – 25,230,914	+	6	105	75.00	-2.02	0.46	0.778354
9548	3R_DroMel_CAF1	25,231,059 – 25,231,162	- - - - - - - - -	15271	25,231,059 – 25,231,162	-	6	110	86.60	-1.96	0.79	0.567692
9549	3R_DroMel_CAF1	25,233,852 – 25,233,993	- - - - - - - - -	15272	25,233,852 – 25,233,958	-	6	106	82.08	-1.51	0.66	0.509104
9549	3R_DroMel_CAF1	25,233,852 – 25,233,993	- - - - - - - - -	15273	25,233,886 – 25,233,993	-	6	117	81.70	-2.21	0.54	0.522190
9550	3R_DroMel_CAF1	25,234,926 – 25,235,016	- - - - - - - - -	15274	25,234,926 – 25,235,016	+	6	101	84.20	-2.26	0.83	0.870480
9550	3R_DroMel_CAF1	25,234,926 – 25,235,016	- - - - - - - - -	15275	25,234,926 – 25,235,016	-	6	101	84.20	-2.09	0.79	0.752974
9551	3R_DroMel_CAF1	25,239,384 – 25,239,484	- - - - - - - - -	15276	25,239,384 – 25,239,484	-	6	104	82.42	-1.62	0.65	0.512248
9552	3R_DroMel_CAF1	25,239,918 – 25,240,008	- - - - - - - - -	15277	25,239,918 – 25,240,008	+	5	90	82.09	-2.13	0.74	0.919239
9553	3R_DroMel_CAF1	25,242,110 – 25,242,207	- - - - - - - - -	15278	25,242,110 – 25,242,207	-	5	97	83.39	-1.72	0.68	0.591863
9554	3R_DroMel_CAF1	25,246,573 – 25,246,688	- - - - - - - - -	15279	25,246,573 – 25,246,688	-	5	115	89.57	-1.76	0.83	0.902975
9555	3R_DroMel_CAF1	25,247,275 – 25,247,397	- - - - - - - - -	15280	25,247,275 – 25,247,365	+	6	91	82.50	-1.78	0.71	0.659679
				15281	25,247,275 – 25,247,365	-	6	91	82.50	-1.67	0.74	0.656601
				15282	25,247,296 – 25,247,397	+	6	102	79.13	-1.47	0.67	0.718089
9556	3R_DroMel_CAF1	25,251,196 – 25,251,336	- - - - - - - - -	15283	25,251,196 – 25,251,300	+	6	110	74.23	-2.85	0.25	0.906269
9556	3R_DroMel_CAF1	25,251,196 – 25,251,336	- - - - - - - - -	15284	25,251,227 – 25,251,336	-	6	115	77.56	-1.22	0.64	0.510457
9557	3R_DroMel_CAF1	25,252,370 – 25,252,471	- - - "knownCDS=Parent=FBtr0085420;Name=CG11516-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11516-RA" - - - - -	15285	25,252,370 – 25,252,471	+	6	111	84.74	-1.54	0.81	0.506725
9558	3R_DroMel_CAF1	25,252,966 – 25,253,067	- - - - - - - - -	15286	25,252,966 – 25,253,067	+	6	120	64.92	-2.07	0.29	0.736869
9559	3R_DroMel_CAF1	25,253,842 – 25,253,957	- - - - - - - - -	15287	25,253,842 – 25,253,957	-	5	115	93.13	-2.24	0.77	0.891437
9560	3R_DroMel_CAF1	25,257,441 – 25,257,555	- - - - - - - - -	15288	25,257,441 – 25,257,555	+	5	116	95.30	-2.53	0.83	0.991407
9560	3R_DroMel_CAF1	25,257,441 – 25,257,555	- - - - - - - - -	15289	25,257,441 – 25,257,555	-	5	116	95.30	-2.99	0.80	0.990035
9561	3R_DroMel_CAF1	25,257,998 – 25,258,090	- - - - - - - - -	15290	25,257,998 – 25,258,090	+	6	104	82.18	-1.93	0.60	0.524681
9562	3R_DroMel_CAF1	25,260,652 – 25,260,759	- - - - - - - - -	15291	25,260,652 – 25,260,759	+	6	111	79.59	-1.43	0.69	0.709953
9562	3R_DroMel_CAF1	25,260,652 – 25,260,759	- - - - - - - - -	15292	25,260,652 – 25,260,759	-	6	111	79.59	-2.73	0.61	0.957121
9563	3R_DroMel_CAF1	25,264,710 – 25,264,803	- - - - - - - - -	15293	25,264,710 – 25,264,803	+	6	102	75.61	-1.72	0.60	0.858504
9564	3R_DroMel_CAF1	25,264,947 – 25,265,043	- - - - - - - - -	15294	25,264,947 – 25,265,043	-	5	96	93.33	-2.54	0.83	0.995590
9565	3R_DroMel_CAF1	25,265,392 – 25,265,487	- - - - - - - - -	15295	25,265,392 – 25,265,487	-	6	104	74.75	-1.36	0.59	0.545757
9566	3R_DroMel_CAF1	25,266,178 – 25,266,280	- - - - - - - - -	15296	25,266,178 – 25,266,280	-	6	120	74.57	-1.88	0.49	0.777727
9567	3R_DroMel_CAF1	25,268,677 – 25,268,811	- - - - - - - - -	15297	25,268,677 – 25,268,786	-	6	117	81.23	-2.18	0.56	0.645410
9567	3R_DroMel_CAF1	25,268,677 – 25,268,811	- - - - - - - - -	15298	25,268,715 – 25,268,811	+	6	118	78.20	-1.72	0.59	0.718415
9568	3R_DroMel_CAF1	25,272,037 – 25,272,146	- - - - - - - - -	15299	25,272,037 – 25,272,146	-	5	110	73.94	-1.40	0.67	0.690489
9569	3R_DroMel_CAF1	25,277,117 – 25,277,236	- - - - - - - - -	15300	25,277,117 – 25,277,236	+	4	119	83.84	-2.18	0.84	0.953316
9569	3R_DroMel_CAF1	25,277,117 – 25,277,236	- - - - - - - - -	15301	25,277,117 – 25,277,236	-	4	119	83.84	-2.03	0.81	0.909800
9570	3R_DroMel_CAF1	25,279,367 – 25,279,537	- - - - - - - - -	15302	25,279,367 – 25,279,471	-	5	104	82.69	-2.39	0.51	0.688760
				15303	25,279,431 – 25,279,537	+	5	120	77.40	-2.77	0.49	0.995460
				15304	25,279,431 – 25,279,537	-	5	120	77.40	-2.07	0.58	0.908387
9571	3R_DroMel_CAF1	25,283,043 – 25,283,147	- - - - - - - - -	15305	25,283,043 – 25,283,147	-	6	109	78.44	-1.57	0.59	0.570277
9572	3R_DroMel_CAF1	25,286,842 – 25,286,932	- - - - - - - - -	15306	25,286,842 – 25,286,932	+	6	95	78.98	-2.05	0.63	0.899479
9573	3R_DroMel_CAF1	25,288,131 – 25,288,243	- - - "knownCDS=Parent=FBtr0085422;Name=Ptp99A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2005-RA" - - - - -	15307	25,288,131 – 25,288,243	-	6	118	73.71	-2.30	0.49	0.974568
9574	3R_DroMel_CAF1	25,291,633 – 25,291,724	- - - - - - - - -	15308	25,291,633 – 25,291,724	+	6	101	72.27	-2.94	0.46	0.998002
9574	3R_DroMel_CAF1	25,291,633 – 25,291,724	- - - - - - - - -	15309	25,291,633 – 25,291,724	-	6	101	72.27	-2.57	0.36	0.977698
9575	3R_DroMel_CAF1	25,292,483 – 25,292,577	- - - - - - - - -	15310	25,292,483 – 25,292,577	+	6	116	80.41	-1.42	0.66	0.593817
9576	3R_DroMel_CAF1	25,298,539 – 25,298,637	- - - - - - - - -	15311	25,298,539 – 25,298,637	-	5	102	71.35	-1.01	0.73	0.784213
9577	3R_DroMel_CAF1	25,301,975 – 25,302,089	- - - "knownCDS=Parent=FBtr0085424;Name=Ptp99A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2005-RC" - - - - -	15312	25,301,975 – 25,302,089	-	6	120	80.61	-1.29	0.72	0.616419
9578	3R_DroMel_CAF1	25,303,096 – 25,303,190	- - - - - - - - -	15313	25,303,096 – 25,303,190	-	6	94	91.25	-1.11	0.93	0.647193
9579	3R_DroMel_CAF1	25,303,387 – 25,303,480	- - - - - - - - -	15314	25,303,387 – 25,303,480	+	5	96	77.37	-1.82	0.34	0.512185
9580	3R_DroMel_CAF1	25,303,510 – 25,303,602	- - - - - - - - -	15315	25,303,510 – 25,303,602	+	6	120	76.68	-1.63	0.64	0.862608
9581	3R_DroMel_CAF1	25,304,830 – 25,304,923	- - - - - - - - -	15316	25,304,830 – 25,304,923	+	5	93	94.51	-2.44	0.96	0.999931
9581	3R_DroMel_CAF1	25,304,830 – 25,304,923	- - - - - - - - -	15317	25,304,830 – 25,304,923	-	5	93	94.51	-1.81	0.86	0.971653
9582	3R_DroMel_CAF1	25,309,754 – 25,309,847	- - - "knownCDS=Parent=FBtr0085422;Name=Ptp99A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2005-RA" - - - - -	15318	25,309,754 – 25,309,847	-	3	108	79.32	-2.18	0.66	0.935476
9583	3R_DroMel_CAF1	25,313,690 – 25,313,807	- - - "knownCDS=Parent=FBtr0085436;Name=CG2321-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2321-RA" - - - - -	15319	25,313,690 – 25,313,807	+	6	117	77.66	-1.55	0.63	0.743641
9584	3R_DroMel_CAF1	25,317,754 – 25,317,859	- - - "knownCDS=Parent=FBtr0085433, FBtr0085434;Name=CG2310-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2310-RA, FlyBase+Annotation+IDs:CG2310-RB" - - - - -	15320	25,317,754 – 25,317,859	-	6	110	71.66	-1.47	0.53	0.581317
9585	3R_DroMel_CAF1	25,320,462 – 25,320,552	- - - - - - - - -	15321	25,320,462 – 25,320,552	-	6	91	81.28	-1.49	0.72	0.662867
9586	3R_DroMel_CAF1	25,327,258 – 25,327,393	- - - - - - - - -	15322	25,327,258 – 25,327,353	+	4	95	86.02	-1.94	0.68	0.738802
9586	3R_DroMel_CAF1	25,327,258 – 25,327,393	- - - - - - - - -	15323	25,327,290 – 25,327,393	+	4	103	91.58	-1.58	0.76	0.506842
9587	3R_DroMel_CAF1	25,329,573 – 25,329,665	- - - - - - - - -	15324	25,329,573 – 25,329,665	+	5	95	70.87	-1.65	0.22	0.517286
9588	3R_DroMel_CAF1	25,333,372 – 25,333,469	- - - - - - - - -	15325	25,333,372 – 25,333,469	+	6	97	84.95	-1.65	0.91	0.817823
9589	3R_DroMel_CAF1	25,337,788 – 25,337,879	- - - - - - - - -	15326	25,337,788 – 25,337,879	+	6	111	71.53	-2.02	0.56	0.973157
9589	3R_DroMel_CAF1	25,337,788 – 25,337,879	- - - - - - - - -	15327	25,337,788 – 25,337,879	-	6	111	71.53	-1.99	0.65	0.985696
9590	3R_DroMel_CAF1	25,338,070 – 25,338,199	- - - - - - - - -	15328	25,338,070 – 25,338,175	+	5	108	76.64	-2.04	0.59	0.925849
9590	3R_DroMel_CAF1	25,338,070 – 25,338,199	- - - - - - - - -	15329	25,338,101 – 25,338,199	+	4	98	67.94	-1.73	0.70	0.990464
9591	3R_DroMel_CAF1	25,339,571 – 25,339,827	- - - - - - - - -	15330	25,339,571 – 25,339,662	+	6	120	75.16	-2.70	0.62	0.994146
				15331	25,339,571 – 25,339,662	-	6	120	75.16	-2.13	0.59	0.969917
				15332	25,339,640 – 25,339,735	+	4	104	76.97	-2.15	0.64	0.959032
				15333	25,339,735 – 25,339,827	-	5	103	71.34	-1.83	0.50	0.830929
9592	3R_DroMel_CAF1	25,340,121 – 25,340,211	- - - - - - - - -	15334	25,340,121 – 25,340,211	+	6	108	82.79	-1.99	0.65	0.597136
9592	3R_DroMel_CAF1	25,340,121 – 25,340,211	- - - - - - - - -	15335	25,340,121 – 25,340,211	-	6	108	82.79	-2.03	0.65	0.619293
9593	3R_DroMel_CAF1	25,341,312 – 25,341,403	- - - - - - - - -	15336	25,341,312 – 25,341,403	-	6	91	77.97	-2.42	0.46	0.858971
9594	3R_DroMel_CAF1	25,341,512 – 25,341,646	- - - - - - - - -	15337	25,341,512 – 25,341,609	+	6	108	71.74	-1.52	0.55	0.716073
				15338	25,341,512 – 25,341,609	-	6	108	71.74	-2.07	0.44	0.921414
				15339	25,341,545 – 25,341,646	+	6	114	68.12	-2.32	0.46	0.988817
				15340	25,341,545 – 25,341,646	-	6	114	68.12	-1.80	0.37	0.654266
9595	3R_DroMel_CAF1	25,343,399 – 25,343,507	- - - - - - - - -	15341	25,343,399 – 25,343,507	+	5	109	85.89	-2.08	0.70	0.775134
9596	3R_DroMel_CAF1	25,346,803 – 25,346,896	- - - - - - - - -	15342	25,346,803 – 25,346,896	-	5	93	92.66	-1.37	0.83	0.654747
9597	3R_DroMel_CAF1	25,350,613 – 25,350,732	- - - - - - - - -	15343	25,350,613 – 25,350,732	+	6	119	97.36	-2.09	0.84	0.775933
9597	3R_DroMel_CAF1	25,350,613 – 25,350,732	- - - - - - - - -	15344	25,350,613 – 25,350,732	-	6	119	97.36	-2.93	0.83	0.968303
9598	3R_DroMel_CAF1	25,352,559 – 25,352,658	- - - - - - - - -	15345	25,352,559 – 25,352,658	+	6	115	82.31	-1.78	0.62	0.517158
9599	3R_DroMel_CAF1	25,354,500 – 25,354,598	- - - - - - - - -	15346	25,354,500 – 25,354,598	+	6	108	77.39	-1.92	0.73	0.958081
9600	3R_DroMel_CAF1	25,356,386 – 25,356,492	- - - - - - - - -	15347	25,356,386 – 25,356,492	-	5	106	69.43	-1.81	0.38	0.694472
9601	3R_DroMel_CAF1	25,358,759 – 25,358,873	- - - - - - - - -	15348	25,358,759 – 25,358,873	+	5	120	92.48	-1.86	0.83	0.953250
9601	3R_DroMel_CAF1	25,358,759 – 25,358,873	- - - - - - - - -	15349	25,358,759 – 25,358,873	-	5	120	92.48	-2.43	0.78	0.963313
9602	3R_DroMel_CAF1	25,360,829 – 25,360,948	- - - - - - - - -	15350	25,360,829 – 25,360,921	+	6	107	80.75	-1.56	0.76	0.768323
				15351	25,360,829 – 25,360,921	-	6	107	80.75	-2.76	0.75	0.946757
				15352	25,360,850 – 25,360,948	-	6	113	80.54	-2.01	0.64	0.809897
9603	3R_DroMel_CAF1	25,363,471 – 25,363,567	- - - - - - - - -	15353	25,363,471 – 25,363,567	-	4	101	87.37	-1.36	0.88	0.551729
9604	3R_DroMel_CAF1	25,363,732 – 25,363,841	- - - - - - - - -	15354	25,363,732 – 25,363,841	+	5	118	78.32	-2.04	0.79	0.970645
9605	3R_DroMel_CAF1	25,365,408 – 25,365,499	- - - - - - - - -	15355	25,365,408 – 25,365,499	-	6	114	78.19	-1.86	0.51	0.547576
9606	3R_DroMel_CAF1	25,368,694 – 25,368,784	- - - - - - - - -	15356	25,368,694 – 25,368,784	+	6	97	77.23	-2.57	0.32	0.622706
9607	3R_DroMel_CAF1	25,369,352 – 25,369,444	- - - - - - - - -	15357	25,369,352 – 25,369,444	+	4	107	73.33	-2.25	0.75	0.998305
9608	3R_DroMel_CAF1	25,372,875 – 25,372,981	- - - - - - - - -	15358	25,372,875 – 25,372,981	-	6	115	80.06	-1.48	0.64	0.604600
9609	3R_DroMel_CAF1	25,374,552 – 25,374,644	- - - - - - - - -	15359	25,374,552 – 25,374,644	-	4	113	81.95	-1.99	0.58	0.567509
9610	3R_DroMel_CAF1	25,376,286 – 25,376,376	- - - - - - - - -	15360	25,376,286 – 25,376,376	+	6	99	79.02	-2.72	0.37	0.685301
9611	3R_DroMel_CAF1	25,381,766 – 25,381,864	- - - - - - - - -	15361	25,381,766 – 25,381,864	-	6	99	79.73	-1.81	0.62	0.749225
9612	3R_DroMel_CAF1	25,393,291 – 25,393,388	- - - - - - - - -	15362	25,393,291 – 25,393,388	+	6	120	77.17	-2.59	0.57	0.981265
9612	3R_DroMel_CAF1	25,393,291 – 25,393,388	- - - - - - - - -	15363	25,393,291 – 25,393,388	-	6	120	77.17	-1.83	0.62	0.892786
9613	3R_DroMel_CAF1	25,395,988 – 25,396,087	- - - - - - - - -	15364	25,395,988 – 25,396,087	-	6	106	80.54	-1.54	0.87	0.813496
9614	3R_DroMel_CAF1	25,398,379 – 25,398,475	- - - - - - - - -	15365	25,398,379 – 25,398,475	-	6	107	82.15	-1.50	0.77	0.645538
9615	3R_DroMel_CAF1	25,400,263 – 25,400,354	- - - - - - - - -	15366	25,400,263 – 25,400,354	-	6	110	78.82	-1.42	0.66	0.702279
9616	3R_DroMel_CAF1	25,403,287 – 25,403,396	- - - - - - - - -	15367	25,403,287 – 25,403,396	+	5	120	74.44	-1.68	0.26	0.612812
9617	3R_DroMel_CAF1	25,403,788 – 25,403,891	- - - - - - - - -	15368	25,403,788 – 25,403,891	-	6	120	79.96	-2.38	0.54	0.825373
9618	3R_DroMel_CAF1	25,404,422 – 25,404,553	- - - - - - - - -	15369	25,404,422 – 25,404,528	+	6	109	77.75	-2.16	0.75	0.969173
				15370	25,404,422 – 25,404,528	-	6	109	77.75	-1.95	0.70	0.946456
				15371	25,404,459 – 25,404,553	+	6	100	81.74	-2.21	0.63	0.752149
				15372	25,404,459 – 25,404,553	-	6	100	81.74	-1.99	0.67	0.749185
9619	3R_DroMel_CAF1	25,404,817 – 25,404,913	- - - - - - - - -	15373	25,404,817 – 25,404,913	+	3	105	70.41	-3.62	0.48	0.999480
9619	3R_DroMel_CAF1	25,404,817 – 25,404,913	- - - - - - - - -	15374	25,404,817 – 25,404,913	-	3	105	70.41	-3.10	0.40	0.753440
9620	3R_DroMel_CAF1	25,405,657 – 25,405,751	- - - - - - - - -	15375	25,405,657 – 25,405,751	+	6	104	84.08	-1.45	0.81	0.500000
9621	3R_DroMel_CAF1	25,406,111 – 25,406,269	- - - - - - - - -	15376	25,406,111 – 25,406,214	+	6	107	77.54	-2.43	0.58	0.968188
				15377	25,406,111 – 25,406,214	-	6	107	77.54	-1.66	0.64	0.844957
				15378	25,406,141 – 25,406,242	+	6	105	75.23	-2.36	0.44	0.935842
				15379	25,406,174 – 25,406,269	-	6	101	74.40	-0.78	0.73	0.584490
9622	3R_DroMel_CAF1	25,408,840 – 25,408,939	- - - - - - - - -	15380	25,408,840 – 25,408,939	+	5	116	69.38	-1.80	0.43	0.748516
9623	3R_DroMel_CAF1	25,410,269 – 25,410,373	- - - - - - - - -	15381	25,410,269 – 25,410,373	+	6	105	85.70	-1.42	0.89	0.614793
9623	3R_DroMel_CAF1	25,410,269 – 25,410,373	- - - - - - - - -	15382	25,410,269 – 25,410,373	-	6	105	85.70	-2.16	0.77	0.614156
9624	3R_DroMel_CAF1	25,415,979 – 25,416,071	- - - "knownCDS=Parent=FBtr0085470;Name=CG31041-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31041-RA" - - - - -	15383	25,415,979 – 25,416,071	+	6	103	76.10	-1.98	0.43	0.545155
9624	3R_DroMel_CAF1	25,415,979 – 25,416,071		15384	25,415,979 – 25,416,071	-	6	103	76.10	-1.71	0.56	0.757415
9625	3R_DroMel_CAF1	25,430,358 – 25,430,497	- - - - - - - - -	15385	25,430,358 – 25,430,466	+	5	112	80.58	-2.48	0.53	0.922881
				15386	25,430,393 – 25,430,497	+	5	108	78.19	-2.05	0.56	0.855351
				15387	25,430,393 – 25,430,497	-	5	108	78.19	-2.50	0.54	0.980843
9626	3R_DroMel_CAF1	25,431,465 – 25,431,576	- - - - - - - - -	15388	25,431,465 – 25,431,562	-	6	99	76.37	-2.26	0.47	0.898910
				15389	25,431,484 – 25,431,576	+	5	94	93.53	-2.12	0.78	0.908590
				15390	25,431,484 – 25,431,576	-	5	94	93.53	-1.29	0.82	0.500000
9627	3R_DroMel_CAF1	25,434,149 – 25,434,309	- - - - - - - - -	15391	25,434,149 – 25,434,269	+	4	120	88.75	-2.51	0.82	0.969071
				15392	25,434,149 – 25,434,269	-	4	120	88.75	-1.73	0.79	0.749330
				15393	25,434,189 – 25,434,309	+	4	120	91.94	-1.69	0.80	0.648422
9628	3R_DroMel_CAF1	25,434,429 – 25,434,578	- - - "knownCDS=texon11715;Parent=CG_RGUI_GID_mRNA_40009852, CG_DGIL_SNO_28368145" - - - - -	15394	25,434,429 – 25,434,542	+	4	113	91.89	-1.68	0.89	0.828064
9628	3R_DroMel_CAF1	25,434,429 – 25,434,578		15395	25,434,469 – 25,434,578	+	4	109	90.21	-1.99	0.94	0.967386
9629	3R_DroMel_CAF1	25,442,496 – 25,442,607	- - - - - - - - -	15396	25,442,496 – 25,442,607	+	5	119	89.84	-1.76	0.80	0.855596
9630	3R_DroMel_CAF1	25,443,624 – 25,443,716	- - - - - - - - -	15397	25,443,624 – 25,443,716	-	5	107	81.22	-1.44	0.78	0.542641
9631	3R_DroMel_CAF1	25,445,428 – 25,445,568	- - - "knownCDS=Parent=FBtr0085447;Name=CG1907-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1907-RA" - - - - -	15398	25,445,428 – 25,445,528	+	6	100	85.80	-2.04	0.76	0.532079
9631	3R_DroMel_CAF1	25,445,428 – 25,445,568		15399	25,445,448 – 25,445,568	+	6	120	75.28	-1.89	0.49	0.723152
9632	3R_DroMel_CAF1	25,449,636 – 25,449,747	- - - - - - - - -	15400	25,449,636 – 25,449,747	+	5	112	80.11	-1.43	0.71	0.500000
9633	3R_DroMel_CAF1	25,457,943 – 25,458,033	- - - - - - - - -	15401	25,457,943 – 25,458,033	+	6	90	77.23	-1.59	0.55	0.524052
9633	3R_DroMel_CAF1	25,457,943 – 25,458,033	- - - - - - - - -	15402	25,457,943 – 25,458,033	-	6	90	77.23	-2.06	0.55	0.881665
9634	3R_DroMel_CAF1	25,462,346 – 25,462,441	- - - - - - - - -	15403	25,462,346 – 25,462,441	+	4	95	84.93	-2.09	0.63	0.725894
9634	3R_DroMel_CAF1	25,462,346 – 25,462,441	- - - - - - - - -	15404	25,462,346 – 25,462,441	-	4	95	84.93	-1.68	0.71	0.671925
9635	3R_DroMel_CAF1	25,462,819 – 25,462,917	- - - - - - - - -	15405	25,462,819 – 25,462,917	+	4	111	86.65	-4.26	0.66	0.952075
9635	3R_DroMel_CAF1	25,462,819 – 25,462,917	- - - - - - - - -	15406	25,462,819 – 25,462,917	-	4	111	86.65	-2.49	0.67	0.870563
9636	3R_DroMel_CAF1	25,464,715 – 25,464,807	- - - "knownCDS=Parent=FBtr0085468;Name=DopR2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18741-RB" - - - - -	15407	25,464,715 – 25,464,807	+	6	120	76.31	-1.48	0.60	0.650940
9636	3R_DroMel_CAF1	25,464,715 – 25,464,807		15408	25,464,715 – 25,464,807	-	6	120	76.31	-1.71	0.70	0.942986
9637	3R_DroMel_CAF1	25,467,499 – 25,467,595	- - - "knownCDS=Parent=FBtr0085468;Name=DopR2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18741-RB" - - - - -	15409	25,467,499 – 25,467,595	-	6	97	84.29	-2.13	0.71	0.563570
9638	3R_DroMel_CAF1	25,471,256 – 25,471,354	- - - - - - - - -	15410	25,471,256 – 25,471,354	+	4	106	85.85	-2.03	0.72	0.831431
9639	3R_DroMel_CAF1	25,471,994 – 25,472,101	- - - - - - - - -	15411	25,471,994 – 25,472,101	+	6	110	77.52	-2.90	0.68	0.988138
9639	3R_DroMel_CAF1	25,471,994 – 25,472,101	- - - - - - - - -	15412	25,471,994 – 25,472,101	-	6	110	77.52	-1.79	0.61	0.856240
9640	3R_DroMel_CAF1	25,481,816 – 25,481,911	- - - - - - - - -	15413	25,481,816 – 25,481,911	+	6	97	81.30	-1.16	0.73	0.500000
9641	3R_DroMel_CAF1	25,482,952 – 25,483,100	- - - - - - - - -	15414	25,482,952 – 25,483,060	+	4	109	86.94	-2.04	0.77	0.872936
9641	3R_DroMel_CAF1	25,482,952 – 25,483,100	- - - - - - - - -	15415	25,482,991 – 25,483,100	+	6	111	78.00	-2.41	0.40	0.666743
9642	3R_DroMel_CAF1	25,489,930 – 25,490,038	- - - - - - - - -	15416	25,489,930 – 25,490,038	+	5	115	73.83	-2.21	0.44	0.971065
9643	3R_DroMel_CAF1	25,492,030 – 25,492,134	- - - - - - - - -	15417	25,492,030 – 25,492,134	+	6	104	74.95	-2.07	0.46	0.837736
9643	3R_DroMel_CAF1	25,492,030 – 25,492,134	- - - - - - - - -	15418	25,492,030 – 25,492,134	-	6	104	74.95	-1.18	0.66	0.642801
9644	3R_DroMel_CAF1	25,492,531 – 25,492,636	- - - "knownCDS=Parent=FBtr0085466;Name=ppk20-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7577-RA" - - - - -	15419	25,492,531 – 25,492,636	+	6	105	75.30	-1.61	0.54	0.600713
9645	3R_DroMel_CAF1	25,495,283 – 25,495,383	- - - "knownCDS=Parent=FBtr0085449;Name=CG18110-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18110-RA" - - - - -	15420	25,495,283 – 25,495,383	-	6	103	77.10	-1.32	0.62	0.539708
9646	3R_DroMel_CAF1	25,496,598 – 25,496,695	- - - - - - - - -	15421	25,496,598 – 25,496,695	-	5	102	74.04	-1.86	0.42	0.738564
9647	3R_DroMel_CAF1	25,511,486 – 25,511,581	- - - - - - - - -	15422	25,511,486 – 25,511,581	-	6	95	78.09	-1.74	0.60	0.774703
9648	3R_DroMel_CAF1	25,512,061 – 25,512,185	- - - - - - - - -	15423	25,512,061 – 25,512,165	-	5	117	85.02	-2.17	0.81	0.946141
9648	3R_DroMel_CAF1	25,512,061 – 25,512,185	- - - - - - - - -	15424	25,512,095 – 25,512,185	-	4	100	91.05	-2.47	0.91	0.989913
9649	3R_DroMel_CAF1	25,517,489 – 25,517,585	- - - - - - - - -	15425	25,517,489 – 25,517,585	+	3	119	66.95	-1.71	0.61	0.991632
9649	3R_DroMel_CAF1	25,517,489 – 25,517,585	- - - - - - - - -	15426	25,517,489 – 25,517,585	-	3	119	66.95	-1.85	0.54	0.968674
9650	3R_DroMel_CAF1	25,517,663 – 25,517,764	- - - - - - - - -	15427	25,517,663 – 25,517,764	+	4	120	75.39	-1.66	0.82	0.946700
9651	3R_DroMel_CAF1	25,519,791 – 25,519,885	- - - - - - - - -	15428	25,519,791 – 25,519,885	+	6	95	77.46	-2.14	0.51	0.844410
9652	3R_DroMel_CAF1	25,520,497 – 25,520,597	- - - - - - - - -	15429	25,520,497 – 25,520,597	+	6	116	72.31	-1.75	0.44	0.553887
9652	3R_DroMel_CAF1	25,520,497 – 25,520,597	- - - - - - - - -	15430	25,520,497 – 25,520,597	-	6	116	72.31	-2.09	0.39	0.836857
9653	3R_DroMel_CAF1	25,521,512 – 25,521,629	- - - "knownCDS=Parent=FBtr0085454;Name=dmrt99B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15504-RA" - - - - -	15431	25,521,512 – 25,521,629	+	6	120	82.23	-2.00	0.71	0.760010
9654	3R_DroMel_CAF1	25,529,393 – 25,529,497	- - - - - - - - -	15432	25,529,393 – 25,529,497	-	6	119	80.42	-1.49	0.70	0.705188
9655	3R_DroMel_CAF1	25,534,014 – 25,534,116	- - - - - - - - -	15433	25,534,014 – 25,534,116	+	5	110	89.91	-1.47	0.80	0.623405
9656	3R_DroMel_CAF1	25,536,347 – 25,536,444	- - - - - - - - -	15434	25,536,347 – 25,536,444	+	5	116	65.66	-2.94	0.43	0.998472
9657	3R_DroMel_CAF1	25,540,941 – 25,541,060	- - - "knownCDS=Parent=FBtr0089608;Name=Dup99B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33495-RA" - - - - -	15435	25,540,941 – 25,541,060	+	4	120	83.96	-1.54	0.71	0.572383
9658	3R_DroMel_CAF1	25,542,814 – 25,542,916	- - - - - - - - -	15436	25,542,814 – 25,542,916	+	5	102	89.31	-1.44	0.77	0.506904
9659	3R_DroMel_CAF1	25,547,174 – 25,547,269	- - - - - - - - -	15437	25,547,174 – 25,547,269	+	4	120	73.80	-2.26	0.47	0.816327
9659	3R_DroMel_CAF1	25,547,174 – 25,547,269	- - - - - - - - -	15438	25,547,174 – 25,547,269	-	4	120	73.80	-2.10	0.62	0.978838
9660	3R_DroMel_CAF1	25,547,493 – 25,547,604	- - - "knownCDS=Parent=FBtr0085457;Name=CG15506-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15506-RB" - - - - -	15439	25,547,493 – 25,547,604	-	6	114	82.08	-1.49	0.66	0.500000
9661	3R_DroMel_CAF1	25,548,436 – 25,548,540	- - - - - - - - -	15440	25,548,436 – 25,548,540	+	6	104	75.28	-2.09	0.41	0.681045
9661	3R_DroMel_CAF1	25,548,436 – 25,548,540	- - - - - - - - -	15441	25,548,436 – 25,548,540	-	6	104	75.28	-2.31	0.46	0.934087
9662	3R_DroMel_CAF1	25,548,789 – 25,548,915	- - - - - - - - -	15442	25,548,789 – 25,548,891	+	5	102	84.61	-1.79	0.66	0.565048
9662	3R_DroMel_CAF1	25,548,789 – 25,548,915	- - - - - - - - -	15443	25,548,818 – 25,548,915	+	5	97	86.91	-2.84	0.65	0.852244
9663	3R_DroMel_CAF1	25,553,050 – 25,553,140	- - - - - - - - -	15444	25,553,050 – 25,553,140	-	5	90	94.22	-1.12	0.97	0.752403
9664	3R_DroMel_CAF1	25,553,677 – 25,553,784	- - - "knownCDS=Parent=FBtr0085460;Name=Kul-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1964-RA" - - - - -	15445	25,553,677 – 25,553,784	+	6	107	78.53	-1.96	0.54	0.739131
9665	3R_DroMel_CAF1	25,556,188 – 25,556,307	- - - "knownCDS=Parent=FBtr0085460;Name=Kul-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1964-RA" - - - - -	15446	25,556,188 – 25,556,307	+	6	120	75.87	-1.26	0.66	0.688544
9666	3R_DroMel_CAF1	25,558,207 – 25,558,339	- - - "knownCDS=Parent=FBtr0085460;Name=Kul-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1964-RA" - - - - -	15447	25,558,207 – 25,558,300	+	4	93	92.83	-2.19	0.92	0.975495
9666	3R_DroMel_CAF1	25,558,207 – 25,558,339		15448	25,558,238 – 25,558,339	+	4	101	94.88	-2.44	0.91	0.973838
9667	3R_DroMel_CAF1	25,562,416 – 25,562,507	- - - - - - - - -	15449	25,562,416 – 25,562,507	-	6	97	79.64	-1.50	0.69	0.748288
9668	3R_DroMel_CAF1	25,563,156 – 25,563,254	- - - "knownCDS=Parent=FBtr0085473;Name=CG7598-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7598-RA" - - - - -	15450	25,563,156 – 25,563,254	-	6	108	77.76	-1.42	0.60	0.517223
9669	3R_DroMel_CAF1	25,567,101 – 25,567,236	- - - - - - - - -	15451	25,567,101 – 25,567,207	+	6	115	80.85	-2.69	0.70	0.935214
				15452	25,567,101 – 25,567,207	-	6	115	80.85	-1.66	0.64	0.638216
				15453	25,567,141 – 25,567,236	+	6	100	74.69	-3.66	0.96	0.945014
				15454	25,567,141 – 25,567,236	-	6	100	74.69	-2.11	0.73	0.987035
9670	3R_DroMel_CAF1	25,567,242 – 25,567,348	- - - - - - - - -	15455	25,567,242 – 25,567,348	+	6	110	74.46	-1.44	0.59	0.642340
9671	3R_DroMel_CAF1	25,567,926 – 25,568,042	- - - - - - - - -	15456	25,567,926 – 25,568,042	+	6	120	82.60	-2.79	0.62	0.790840
9672	3R_DroMel_CAF1	25,577,045 – 25,577,165	- - - "knownCDS=Parent=FBtr0085477;Name=CG1973-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1973-RA" - - - - -	15457	25,577,045 – 25,577,165	+	6	120	83.56	-1.49	0.76	0.511088
9673	3R_DroMel_CAF1	25,588,576 – 25,588,666	- - - - - - - - -	15458	25,588,576 – 25,588,666	+	6	117	65.84	-1.86	0.32	0.620597
9674	3R_DroMel_CAF1	25,597,475 – 25,597,576	- - - - - - - - -	15459	25,597,475 – 25,597,576	+	5	106	91.67	-1.26	0.86	0.581629
9674	3R_DroMel_CAF1	25,597,475 – 25,597,576	- - - - - - - - -	15460	25,597,475 – 25,597,576	-	5	106	91.67	-2.48	0.88	0.999108
9675	3R_DroMel_CAF1	25,598,583 – 25,598,676	- - - - - - - - -	15461	25,598,583 – 25,598,676	+	3	95	97.17	-1.71	0.99	0.795017
9676	3R_DroMel_CAF1	25,603,460 – 25,603,563	- - - - - - - - -	15462	25,603,460 – 25,603,563	-	6	113	72.35	-1.89	0.55	0.938489
9677	3R_DroMel_CAF1	25,604,268 – 25,604,368	- - - - - - - - -	15463	25,604,268 – 25,604,368	-	5	106	86.04	-1.57	0.80	0.627530
9678	3R_DroMel_CAF1	25,605,285 – 25,605,423	- - - "knownCDS=Parent=FBtr0085538;Name=fig-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7615-RA" - - - - -	15464	25,605,285 – 25,605,383	+	6	108	77.50	-1.33	0.62	0.531066
				15465	25,605,315 – 25,605,423	+	6	108	83.27	-2.93	0.71	0.850374
				15466	25,605,315 – 25,605,423	-	6	108	83.27	-1.95	0.65	0.518771
9679	3R_DroMel_CAF1	25,605,645 – 25,605,880	- - - "knownCDS=Parent=FBtr0085538;Name=fig-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7615-RA" - - - - -	15467	25,605,645 – 25,605,762	-	6	117	84.27	-2.07	0.72	0.588895
9679	3R_DroMel_CAF1	25,605,645 – 25,605,880		15468	25,605,762 – 25,605,880	-	6	118	76.05	-1.57	0.55	0.535086
9680	3R_DroMel_CAF1	25,606,835 – 25,606,935	- - - - - - - - -	15469	25,606,835 – 25,606,935	+	5	101	66.83	-1.99	0.33	0.753218
9680	3R_DroMel_CAF1	25,606,835 – 25,606,935	- - - - - - - - -	15470	25,606,835 – 25,606,935	-	5	101	66.83	-2.11	0.38	0.914924
9681	3R_DroMel_CAF1	25,609,640 – 25,609,735	- - - - - - - - -	15471	25,609,640 – 25,609,735	-	3	96	94.41	-1.63	0.97	0.721731
9682	3R_DroMel_CAF1	25,614,585 – 25,614,680	- - - - - - - - -	15472	25,614,585 – 25,614,680	-	6	95	81.55	-2.18	0.59	0.690919
9683	3R_DroMel_CAF1	25,615,372 – 25,615,467	- - - - - - - - -	15473	25,615,372 – 25,615,467	+	4	102	79.05	-1.64	0.81	0.800401
9684	3R_DroMel_CAF1	25,616,159 – 25,616,255	- - - - - - - - -	15474	25,616,159 – 25,616,255	+	5	96	86.46	-2.10	0.67	0.654731
9684	3R_DroMel_CAF1	25,616,159 – 25,616,255	- - - - - - - - -	15475	25,616,159 – 25,616,255	-	5	96	86.46	-2.47	0.63	0.701775
9685	3R_DroMel_CAF1	25,622,252 – 25,622,372	- - - "knownCDS=Parent=FBtr0085537;Name=CG7837-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7837-RA" - - - - -	15476	25,622,252 – 25,622,372	-	6	120	79.56	-1.91	0.56	0.650272
9686	3R_DroMel_CAF1	25,624,905 – 25,624,997	- - - "knownCDS=Parent=FBtr0085537;Name=CG7837-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7837-RA" - - - - -	15477	25,624,905 – 25,624,997	-	6	92	75.83	-2.53	0.41	0.939529
9687	3R_DroMel_CAF1	25,632,690 – 25,632,850	- - - - - - - - -	15478	25,632,690 – 25,632,810	-	5	120	93.33	-1.59	0.85	0.887510
9687	3R_DroMel_CAF1	25,632,690 – 25,632,850	- - - - - - - - -	15479	25,632,730 – 25,632,850	-	5	120	91.91	-1.64	0.84	0.885326
9688	3R_DroMel_CAF1	25,633,873 – 25,633,993	- - - "knownCDS=Parent=FBtr0085484;Name=ca-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31037-RA" - - - - -	15480	25,633,873 – 25,633,993	-	6	120	81.39	-1.86	0.63	0.658215
9689	3R_DroMel_CAF1	25,634,834 – 25,634,930	- - - - - - - - -	15481	25,634,834 – 25,634,930	-	6	98	85.44	-1.89	0.81	0.640845
9690	3R_DroMel_CAF1	25,638,378 – 25,638,529	- - - "knownCDS=Parent=FBtr0085484;Name=ca-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31037-RA" - - - - -	15482	25,638,378 – 25,638,492	+	6	117	75.26	-2.21	0.46	0.905143
				15483	25,638,418 – 25,638,529	+	6	111	77.98	-1.73	0.54	0.565037
				15484	25,638,418 – 25,638,529	-	6	111	77.98	-2.00	0.47	0.540962
9691	3R_DroMel_CAF1	25,642,632 – 25,642,751	- - - "knownCDS=Parent=FBtr0085531;Name=CG7829-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7829-RA" - - - - -	15485	25,642,632 – 25,642,751	-	6	120	80.18	-1.36	0.70	0.657157
9692	3R_DroMel_CAF1	25,643,811 – 25,643,914	- - - - - - - - -	15486	25,643,811 – 25,643,914	+	5	120	75.78	-1.77	0.50	0.587442
9693	3R_DroMel_CAF1	25,644,215 – 25,644,364	- - - - - - - - -	15487	25,644,215 – 25,644,326	+	3	111	82.81	-1.89	0.82	0.838137
9693	3R_DroMel_CAF1	25,644,215 – 25,644,364	- - - - - - - - -	15488	25,644,246 – 25,644,364	+	3	119	78.36	-1.27	0.77	0.584641
9694	3R_DroMel_CAF1	25,648,317 – 25,648,411	- - - "knownCDS=Parent=FBtr0085486;Name=CG7802-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7802-RB" - - - - -	15489	25,648,317 – 25,648,411	-	6	99	81.11	-1.34	0.76	0.637640
9695	3R_DroMel_CAF1	25,649,473 – 25,649,571	- - - "knownCDS=Parent=FBtr0085485, FBtr0085486;Name=CG7802-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7802-RA, FlyBase+Annotation+IDs:CG7802-RB" - - - - -	15490	25,649,473 – 25,649,571	-	6	105	74.98	-1.50	0.57	0.617644
9696	3R_DroMel_CAF1	25,650,799 – 25,650,897	- - - - - - - - -	15491	25,650,799 – 25,650,897	+	6	113	73.13	-0.55	0.88	0.777464
9697	3R_DroMel_CAF1	25,652,176 – 25,652,284	- - - - - - - - -	15492	25,652,176 – 25,652,284	+	6	120	94.12	-1.62	0.88	0.837175
9697	3R_DroMel_CAF1	25,652,176 – 25,652,284	- - - - - - - - -	15493	25,652,176 – 25,652,284	-	6	120	94.12	-1.98	0.81	0.510838
9698	3R_DroMel_CAF1	25,653,638 – 25,653,746	- - - "knownCDS=Parent=FBtr0085528;Name=CG31033-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31033-RC" - - - - -	15494	25,653,638 – 25,653,746	+	6	112	79.75	-1.78	0.62	0.748093
9699	3R_DroMel_CAF1	25,654,824 – 25,654,922	- - - - - - - - -	15495	25,654,824 – 25,654,922	-	5	120	74.16	-1.75	0.14	0.842747
9700	3R_DroMel_CAF1	25,654,967 – 25,655,058	- - - - - - - - -	15496	25,654,967 – 25,655,058	+	5	91	80.19	-1.47	0.72	0.552348
9701	3R_DroMel_CAF1	25,655,424 – 25,655,520	- - - - - - - - -	15497	25,655,424 – 25,655,520	+	5	97	95.23	-1.75	0.95	0.995074
9702	3R_DroMel_CAF1	25,660,740 – 25,660,855	- - - - - - - - -	15498	25,660,740 – 25,660,855	-	5	119	71.48	-2.54	0.31	0.996158
9703	3R_DroMel_CAF1	25,662,329 – 25,662,420	- - - "knownCDS=Parent=FBtr0085487;Name=CG15510-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15510-RA" - - - - -	15499	25,662,329 – 25,662,420	+	5	92	82.11	-2.42	0.53	0.803915
9703	3R_DroMel_CAF1	25,662,329 – 25,662,420		15500	25,662,329 – 25,662,420	-	5	92	82.11	-1.56	0.69	0.518943
9704	3R_DroMel_CAF1	25,663,881 – 25,663,984	- - - - - - - - -	15501	25,663,881 – 25,663,984	+	5	118	77.89	-2.27	0.66	0.977346
9704	3R_DroMel_CAF1	25,663,881 – 25,663,984	- - - - - - - - -	15502	25,663,881 – 25,663,984	-	5	118	77.89	-3.66	0.71	0.999655
9705	3R_DroMel_CAF1	25,665,229 – 25,665,332	- - - - - - - - -	15503	25,665,229 – 25,665,332	+	5	115	75.65	-2.21	0.44	0.950431
9706	3R_DroMel_CAF1	25,669,016 – 25,669,115	- - - - - - - - -	15504	25,669,016 – 25,669,115	-	5	120	74.45	-2.34	0.61	0.993035
9707	3R_DroMel_CAF1	25,670,147 – 25,670,240	- - - - - - - - -	15505	25,670,147 – 25,670,240	+	3	104	88.04	-2.66	0.64	0.540483
9708	3R_DroMel_CAF1	25,674,410 – 25,674,522	- - - - - - - - -	15506	25,674,410 – 25,674,522	+	3	120	78.51	-2.22	0.77	0.987506
9708	3R_DroMel_CAF1	25,674,410 – 25,674,522	- - - - - - - - -	15507	25,674,410 – 25,674,522	-	3	120	78.51	-1.94	0.75	0.950538
9709	3R_DroMel_CAF1	25,679,748 – 25,679,846	- - - "knownCDS=Parent=FBtr0085488;Name=Cad99C-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31009-RA" - - - - -	15508	25,679,748 – 25,679,846	-	6	102	83.56	-1.61	0.75	0.549172
9710	3R_DroMel_CAF1	25,686,197 – 25,686,299	- - - "knownCDS=Parent=FBtr0085523;Name=CG15514-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15514-RA" - - - - -	15509	25,686,197 – 25,686,299	+	6	111	82.79	-2.12	0.73	0.759287
9711	3R_DroMel_CAF1	25,687,172 – 25,687,274	- - - - - - - - -	15510	25,687,172 – 25,687,274	-	5	113	81.13	-2.47	0.68	0.969434
9712	3R_DroMel_CAF1	25,687,511 – 25,687,603	- - - - - - - - -	15511	25,687,511 – 25,687,603	+	6	110	82.45	-2.28	0.59	0.599718
9713	3R_DroMel_CAF1	25,688,476 – 25,688,608	- - - "knownCDS=Parent=FBtr0085489;Name=RpS8-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7808-RC" - - - - -	15512	25,688,476 – 25,688,568	+	6	99	81.97	-1.56	0.80	0.706917
				15513	25,688,476 – 25,688,568	-	6	99	81.97	-1.58	0.76	0.690955
				15514	25,688,497 – 25,688,608	+	6	120	79.47	-1.85	0.67	0.858398
9714	3R_DroMel_CAF1	25,690,142 – 25,690,262	- - - "knownCDS=Parent=FBtr0089920, FBtr0089922, FBtr0089923, FBtr0089924;Name=CG7816-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7816-RC, FlyBase+Annotation+IDs:CG7816-RD, FlyBase+Annotation+IDs:CG7816-RA, FlyBase+Annotation+IDs:CG7816-RG" - - - - -	15515	25,690,142 – 25,690,262	-	6	120	80.06	-1.51	0.67	0.696105
9715	3R_DroMel_CAF1	25,691,570 – 25,691,704	- - - - - - - - -	15516	25,691,570 – 25,691,668	+	5	98	90.70	-1.81	0.85	0.955689
				15517	25,691,570 – 25,691,668	-	5	98	90.70	-2.50	0.80	0.989330
				15518	25,691,600 – 25,691,704	+	5	108	88.58	-2.30	0.77	0.947406
				15519	25,691,600 – 25,691,704	-	5	108	88.58	-3.20	0.78	0.995337
9716	3R_DroMel_CAF1	25,704,963 – 25,705,078	- - - "knownCDS=Parent=FBtr0085496;Name=CG31038-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31038-RD" - - - - -	15520	25,704,963 – 25,705,078	+	6	120	79.07	-1.61	0.58	0.545845
9717	3R_DroMel_CAF1	25,705,081 – 25,705,180	- - - "knownCDS=Parent=FBtr0085496;Name=CG31038-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31038-RD" - - - - -	15521	25,705,081 – 25,705,180	-	6	102	79.30	-2.22	0.51	0.758315
9718	3R_DroMel_CAF1	25,706,033 – 25,706,134	- - - - - - - - -	15522	25,706,033 – 25,706,134	-	5	102	89.46	-1.81	0.79	0.847796
9719	3R_DroMel_CAF1	25,706,694 – 25,706,858	- - - - - - - - -	15523	25,706,694 – 25,706,797	+	5	112	84.52	-2.18	0.60	0.620153
				15524	25,706,694 – 25,706,797	-	5	112	84.52	-2.51	0.74	0.961118
				15525	25,706,726 – 25,706,837	+	5	120	88.39	-2.18	0.77	0.930483
				15526	25,706,726 – 25,706,837	-	5	120	88.39	-2.67	0.89	0.999312
				15527	25,706,757 – 25,706,858	-	5	101	87.23	-2.23	0.73	0.869483
9720	3R_DroMel_CAF1	25,721,953 – 25,722,055	- - - - - - - - -	15528	25,721,953 – 25,722,055	+	5	116	80.95	-1.93	0.65	0.788979
9720	3R_DroMel_CAF1	25,721,953 – 25,722,055	- - - - - - - - -	15529	25,721,953 – 25,722,055	-	5	116	80.95	-1.92	0.55	0.566951
9721	3R_DroMel_CAF1	25,726,982 – 25,727,086	- - - - - - - - -	15530	25,726,982 – 25,727,086	+	6	120	80.64	-1.65	0.66	0.688796
9722	3R_DroMel_CAF1	25,728,284 – 25,728,389	- - - - - - - - -	15531	25,728,284 – 25,728,389	-	6	120	80.49	-1.36	0.65	0.524717
9723	3R_DroMel_CAF1	25,729,175 – 25,729,318	- - - "knownCDS=Parent=FBtr0085515;Name=CG15517-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15517-RA" - - - - -	15532	25,729,175 – 25,729,294	-	6	120	81.12	-1.61	0.62	0.554489
9723	3R_DroMel_CAF1	25,729,175 – 25,729,318		15533	25,729,215 – 25,729,318	-	6	118	69.49	-1.31	0.57	0.588978
9724	3R_DroMel_CAF1	25,731,672 – 25,731,776	- - - - - - - - -	15534	25,731,672 – 25,731,776	-	6	120	79.44	-1.96	0.59	0.784729
9725	3R_DroMel_CAF1	25,733,064 – 25,733,218	- - - - - - - - -	15535	25,733,064 – 25,733,179	+	5	120	74.12	-2.67	0.53	0.998273
				15536	25,733,064 – 25,733,179	-	5	120	74.12	-2.23	0.56	0.983922
				15537	25,733,100 – 25,733,218	-	5	119	82.42	-1.61	0.69	0.555585
9726	3R_DroMel_CAF1	25,735,568 – 25,735,659	- - - "knownCDS=Parent=FBtr0085501;Name=CG31036-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31036-RA" - - - - -	15538	25,735,568 – 25,735,659	-	6	102	67.59	-1.82	0.39	0.774104
9727	3R_DroMel_CAF1	25,740,313 – 25,740,418	- - - "knownCDS=Parent=FBtr0085513;Name=trp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7875-RA" - - - - -	15539	25,740,313 – 25,740,418	-	6	120	76.24	-1.46	0.70	0.884900
9728	3R_DroMel_CAF1	25,742,326 – 25,742,418	- - - - - - - - -	15540	25,742,326 – 25,742,418	-	6	99	83.05	-2.21	0.71	0.731766
9729	3R_DroMel_CAF1	25,744,039 – 25,744,141	- - - - - - - - -	15541	25,744,039 – 25,744,141	+	6	103	79.09	-1.56	0.70	0.812754
9730	3R_DroMel_CAF1	25,745,207 – 25,745,306	- - - "knownCDS=Parent=FBtr0085513;Name=trp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7875-RA" - - - - -	15542	25,745,207 – 25,745,306	-	6	109	82.42	-1.56	0.81	0.682608
9731	3R_DroMel_CAF1	25,747,865 – 25,748,177	- - - - - - - - -	15543	25,747,865 – 25,747,980	-	6	120	77.26	-1.98	0.62	0.931651
				15544	25,747,980 – 25,748,100	+	6	120	91.94	-1.86	0.86	0.855705
				15545	25,747,980 – 25,748,100	-	6	120	91.94	-1.93	0.88	0.942927
				15546	25,748,020 – 25,748,140	-	6	120	92.22	-1.56	0.84	0.505212
				15547	25,748,060 – 25,748,177	+	6	120	93.62	-1.99	0.86	0.885702
9732	3R_DroMel_CAF1	25,749,914 – 25,750,034	- - - "knownCDS=Parent=FBtr0085512;Name=Jon99Cii-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31034-RA" - - - - -	15548	25,749,914 – 25,750,034	+	6	120	69.34	-1.81	0.37	0.628130
9733	3R_DroMel_CAF1	25,750,198 – 25,750,329	- - - "knownCDS=Parent=FBtr0085512;Name=Jon99Cii-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31034-RA" - - - - -	15549	25,750,198 – 25,750,316	+	4	118	86.72	-1.50	0.74	0.585522
9733	3R_DroMel_CAF1	25,750,198 – 25,750,329		15550	25,750,236 – 25,750,329	+	4	120	75.42	-1.44	0.68	0.509872
9734	3R_DroMel_CAF1	25,753,051 – 25,753,158	- - - - - - - - -	15551	25,753,051 – 25,753,158	+	6	108	76.87	-1.40	0.61	0.582927
9735	3R_DroMel_CAF1	25,754,204 – 25,754,308	- - - "knownCDS=Parent=FBtr0085503;Name=CG15522-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15522-RA" - - - - -	15552	25,754,204 – 25,754,308	+	6	111	73.74	-1.79	0.59	0.925536
9735	3R_DroMel_CAF1	25,754,204 – 25,754,308		15553	25,754,204 – 25,754,308	-	6	111	73.74	-1.02	0.75	0.855287
9736	3R_DroMel_CAF1	25,756,401 – 25,756,510	- - - "knownCDS=Parent=FBtr0085509;Name=Cog7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31040-RA" - - - - -	15554	25,756,401 – 25,756,510	+	3	109	93.88	-1.83	0.93	0.738056
9737	3R_DroMel_CAF1	25,757,005 – 25,757,125	- - "RNAmicro=f:25757005_t:25757124_strand:+_p:0.564451" "knownCDS=Parent=FBtr0085509;Name=Cog7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31040-RA" - - - - -	15555	25,757,005 – 25,757,125	+	3	120	91.67	-1.52	0.93	0.582798
9738	3R_DroMel_CAF1	25,764,123 – 25,764,240	- - - "knownCDS=Parent=FBtr0085505;Name=CG15523-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15523-RA" - - - - -	15556	25,764,123 – 25,764,240	-	6	117	80.63	-1.67	0.63	0.641476
9739	3R_DroMel_CAF1	25,775,365 – 25,775,488	- - - - - - - - -	15557	25,775,365 – 25,775,466	+	4	109	78.50	-2.05	0.58	0.770560
				15558	25,775,388 – 25,775,488	+	5	111	78.82	-1.93	0.49	0.598556
				15559	25,775,388 – 25,775,488	-	5	111	78.82	-2.24	0.58	0.932987
9740	3R_DroMel_CAF1	25,776,296 – 25,776,431	- - - - - - - - -	15560	25,776,296 – 25,776,398	+	4	102	86.73	-2.86	0.72	0.960395
9740	3R_DroMel_CAF1	25,776,296 – 25,776,431	- - - - - - - - -	15561	25,776,335 – 25,776,431	-	4	96	88.59	-2.40	0.84	0.970013
9741	3R_DroMel_CAF1	25,776,861 – 25,776,960	- - - - - - - - -	15562	25,776,861 – 25,776,960	-	5	99	84.35	-1.64	0.73	0.594499
9742	3R_DroMel_CAF1	25,778,458 – 25,778,561	- - - - - - - - -	15563	25,778,458 – 25,778,561	+	5	119	71.73	-1.76	0.39	0.633761
9743	3R_DroMel_CAF1	25,778,629 – 25,778,745	- - - - - - - - -	15564	25,778,629 – 25,778,745	-	5	116	94.74	-1.76	0.82	0.867410
9744	3R_DroMel_CAF1	25,785,117 – 25,785,212	- - - - - - - - -	15565	25,785,117 – 25,785,212	+	4	101	76.68	-1.59	0.73	0.740237
9745	3R_DroMel_CAF1	25,788,944 – 25,789,098	- - - - - - - - -	15566	25,788,944 – 25,789,060	-	5	120	82.90	-1.83	0.71	0.740442
9745	3R_DroMel_CAF1	25,788,944 – 25,789,098	- - - - - - - - -	15567	25,788,984 – 25,789,098	-	5	118	79.78	-1.76	0.58	0.543720
9746	3R_DroMel_CAF1	25,792,531 – 25,792,636	- - - - - - - - -	15568	25,792,531 – 25,792,636	+	5	113	88.22	-2.16	0.66	0.538753
9747	3R_DroMel_CAF1	25,794,971 – 25,795,075	- - - - - - - - -	15569	25,794,971 – 25,795,075	+	5	111	87.64	-1.68	0.75	0.635501
9747	3R_DroMel_CAF1	25,794,971 – 25,795,075	- - - - - - - - -	15570	25,794,971 – 25,795,075	-	5	111	87.64	-1.97	0.75	0.813088
9748	3R_DroMel_CAF1	25,797,547 – 25,797,640	- - - - - - - - -	15571	25,797,547 – 25,797,640	-	4	93	93.18	-2.27	0.81	0.867410
9749	3R_DroMel_CAF1	25,805,420 – 25,805,536	- - - - - - - - -	15572	25,805,420 – 25,805,536	+	3	116	56.48	-2.94	0.26	0.562867
9750	3R_DroMel_CAF1	25,811,841 – 25,811,958	- - - - - - - - -	15573	25,811,841 – 25,811,958	+	5	118	79.44	-1.96	0.62	0.823834
9751	3R_DroMel_CAF1	25,815,376 – 25,815,535	- - - "knownCDS=Parent=FBtr0085545;Name=CG7896-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7896-RA" - - - - -	15574	25,815,376 – 25,815,495	-	6	119	79.94	-1.68	0.58	0.532131
9751	3R_DroMel_CAF1	25,815,376 – 25,815,535		15575	25,815,416 – 25,815,535	-	6	119	76.47	-1.72	0.53	0.612977
9752	3R_DroMel_CAF1	25,821,806 – 25,821,924	- - - "knownCDS=Parent=FBtr0085546;Name=CG15524-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15524-RA" - - - - -	15576	25,821,806 – 25,821,924	+	6	118	76.78	-1.73	0.52	0.568679
9753	3R_DroMel_CAF1	25,828,363 – 25,828,483	- - - "knownCDS=Parent=FBtr0085550;Name=Tace-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7908-RB" - - - - -	15577	25,828,363 – 25,828,483	+	6	120	83.61	-3.09	0.61	0.727183
9754	3R_DroMel_CAF1	25,833,731 – 25,833,851	- - - "knownCDS=Parent=FBtr0085605;Name=CG7912-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7912-RA" - - - - -	15578	25,833,731 – 25,833,851	-	6	120	80.89	-1.78	0.63	0.665250
9755	3R_DroMel_CAF1	25,841,042 – 25,841,167	- - - - - - - - -	15579	25,841,042 – 25,841,134	+	5	92	84.24	-2.53	0.68	0.932675
				15580	25,841,074 – 25,841,167	+	5	94	84.53	-2.49	0.73	0.953266
				15581	25,841,074 – 25,841,167	-	5	94	84.53	-2.11	0.80	0.926745
9756	3R_DroMel_CAF1	25,843,793 – 25,843,903	- - - - - - - - -	15582	25,843,793 – 25,843,903	+	3	115	81.12	-2.23	0.62	0.779655
9756	3R_DroMel_CAF1	25,843,793 – 25,843,903	- - - - - - - - -	15583	25,843,793 – 25,843,903	-	3	115	81.12	-2.86	0.74	0.991139
9757	3R_DroMel_CAF1	25,847,471 – 25,847,814	- - - - - - - - -	15584	25,847,471 – 25,847,589	-	4	120	90.76	-1.79	0.86	0.848649
				15585	25,847,589 – 25,847,694	+	4	120	89.33	-1.77	0.71	0.611995
				15586	25,847,589 – 25,847,694	-	4	120	89.33	-2.43	0.82	0.958124
				15587	25,847,654 – 25,847,774	-	4	120	95.00	-2.87	0.96	0.993196
				15588	25,847,694 – 25,847,814	-	4	120	92.92	-2.89	0.90	0.991593
9758	3R_DroMel_CAF1	25,848,535 – 25,848,655	- - - - - - - - -	15589	25,848,535 – 25,848,655	-	3	120	96.67	-2.75	0.98	0.985159
9759	3R_DroMel_CAF1	25,851,604 – 25,851,757	- - - - - - - - -	15590	25,851,604 – 25,851,724	+	5	120	81.84	-1.56	0.68	0.510228
				15591	25,851,604 – 25,851,724	-	5	120	81.84	-1.75	0.65	0.603580
				15592	25,851,644 – 25,851,757	-	5	120	87.74	-2.40	0.69	0.797144
9760	3R_DroMel_CAF1	25,852,083 – 25,852,219	- - - - - - - - -	15593	25,852,083 – 25,852,182	+	3	99	81.82	-1.59	0.84	0.777866
9760	3R_DroMel_CAF1	25,852,083 – 25,852,219	- - - - - - - - -	15594	25,852,122 – 25,852,219	+	5	117	64.72	-2.00	0.48	0.945988
9761	3R_DroMel_CAF1	25,854,787 – 25,854,877	- - - - - - - - -	15595	25,854,787 – 25,854,877	-	5	97	80.20	-2.02	0.66	0.877198
9762	3R_DroMel_CAF1	25,856,205 – 25,856,305	- - - - - - - - -	15596	25,856,205 – 25,856,305	-	6	119	71.72	-1.75	0.44	0.630448
9763	3R_DroMel_CAF1	25,856,689 – 25,856,795	- - - "knownCDS=Parent=FBtr0085553, FBtr0085554, FBtr0085555;Name=Axn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7926-RA, FlyBase+Annotation+IDs:CG7926-RC, FlyBase+Annotation+IDs:CG7926-RB" - - - - -	15597	25,856,689 – 25,856,795	-	6	120	77.41	-1.39	0.60	0.523331
9764	3R_DroMel_CAF1	25,857,522 – 25,857,642	- - - "knownCDS=Parent=FBtr0085553, FBtr0085554, FBtr0085555;Name=Axn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7926-RA, FlyBase+Annotation+IDs:CG7926-RC, FlyBase+Annotation+IDs:CG7926-RB" - - - - -	15598	25,857,522 – 25,857,642	+	6	120	83.61	-2.74	0.73	0.823059
9764	3R_DroMel_CAF1	25,857,522 – 25,857,642		15599	25,857,522 – 25,857,642	-	6	120	83.61	-2.05	0.77	0.743925
9765	3R_DroMel_CAF1	25,867,055 – 25,867,197	- - - "knownCDS=Parent=FBtr0085557;Name=Sry-alpha-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17957-RA" - - - - -	15600	25,867,055 – 25,867,157	-	6	120	65.37	-1.93	0.31	0.669101
9765	3R_DroMel_CAF1	25,867,055 – 25,867,197		15601	25,867,095 – 25,867,197	-	6	120	67.74	-2.06	0.30	0.773076
9766	3R_DroMel_CAF1	25,869,102 – 25,869,202	- - - - - - - - -	15602	25,869,102 – 25,869,202	+	5	100	92.30	-1.93	0.79	0.874416
9767	3R_DroMel_CAF1	25,871,232 – 25,871,372	- - - "knownCDS=Parent=FBtr0085592;Name=RpL32-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7939-RB" - - - - -	15603	25,871,232 – 25,871,349	-	6	120	90.45	-1.68	0.87	0.784411
9767	3R_DroMel_CAF1	25,871,232 – 25,871,372		15604	25,871,272 – 25,871,372	-	6	111	79.36	-1.43	0.74	0.792620
9768	3R_DroMel_CAF1	25,876,283 – 25,876,383	- - - - - - - - -	15605	25,876,283 – 25,876,383	-	6	104	80.63	-1.31	0.66	0.516633
9769	3R_DroMel_CAF1	25,882,516 – 25,882,624	- - - - - - - - -	15606	25,882,516 – 25,882,624	+	6	120	72.32	-1.35	0.58	0.601470
9770	3R_DroMel_CAF1	25,886,346 – 25,886,439	- - - - - - - - -	15607	25,886,346 – 25,886,439	-	5	93	89.76	-1.83	0.77	0.812293
9771	3R_DroMel_CAF1	25,891,915 – 25,892,033	- - - - - - - - -	15608	25,891,915 – 25,892,033	-	5	118	91.36	-1.50	0.88	0.891260
9772	3R_DroMel_CAF1	25,892,273 – 25,892,366	- - - - - - - - -	15609	25,892,273 – 25,892,366	+	5	93	82.35	-2.27	0.69	0.921717
9772	3R_DroMel_CAF1	25,892,273 – 25,892,366	- - - - - - - - -	15610	25,892,273 – 25,892,366	-	5	93	82.35	-2.10	0.53	0.557024
9773	3R_DroMel_CAF1	25,893,029 – 25,893,129	- - - "knownCDS=Parent=FBtr0085565;Name=sima-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7951-RA" - - - - -	15611	25,893,029 – 25,893,129	-	6	102	88.28	-1.78	0.82	0.505457
9774	3R_DroMel_CAF1	25,895,967 – 25,896,069	- - - - - - - - -	15612	25,895,967 – 25,896,069	+	5	107	72.51	-1.73	0.07	0.814694
9775	3R_DroMel_CAF1	25,899,815 – 25,899,943	- - - - - - - - -	15613	25,899,815 – 25,899,916	+	6	110	75.68	-2.37	0.43	0.912984
				15614	25,899,849 – 25,899,943	+	6	100	82.57	-2.69	0.55	0.635274
				15615	25,899,849 – 25,899,943	-	6	100	82.57	-3.18	0.48	0.694563
9776	3R_DroMel_CAF1	25,916,978 – 25,917,072	- - - - - - - - -	15616	25,916,978 – 25,917,072	-	6	103	80.19	-2.04	0.66	0.864298
9777	3R_DroMel_CAF1	25,927,983 – 25,928,094	- - - - - - - - -	15617	25,927,983 – 25,928,094	+	5	115	96.27	-1.43	0.96	0.952872
9777	3R_DroMel_CAF1	25,927,983 – 25,928,094	- - - - - - - - -	15618	25,927,983 – 25,928,094	-	5	115	96.27	-1.16	0.97	0.747621
9778	3R_DroMel_CAF1	25,932,499 – 25,932,596	- - - - - - - - -	15619	25,932,499 – 25,932,596	-	6	101	83.25	-3.01	0.81	0.941914
9779	3R_DroMel_CAF1	25,944,025 – 25,944,164	- - - - - - - - -	15620	25,944,025 – 25,944,139	+	6	117	79.10	-2.43	0.47	0.774083
9779	3R_DroMel_CAF1	25,944,025 – 25,944,164	- - - - - - - - -	15621	25,944,061 – 25,944,164	-	6	105	78.74	-1.57	0.59	0.582763
9780	3R_DroMel_CAF1	25,946,076 – 25,946,177	- - - "knownCDS=Parent=FBtr0085565;Name=sima-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7951-RA" - - - - -	15622	25,946,076 – 25,946,177	-	6	111	78.63	-1.74	0.62	0.799825
9781	3R_DroMel_CAF1	25,946,966 – 25,947,067	- - - - - - - - -	15623	25,946,966 – 25,947,067	+	6	109	86.80	-3.40	0.74	0.807096
9782	3R_DroMel_CAF1	25,957,485 – 25,957,595	- - - "knownCDS=Parent=FBtr0085585;Name=CG31029-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31029-RA" - - - - -	15624	25,957,485 – 25,957,595	+	6	110	76.67	-1.58	0.63	0.818465
9782	3R_DroMel_CAF1	25,957,485 – 25,957,595		15625	25,957,485 – 25,957,595	-	6	110	76.67	-1.50	0.69	0.880408
9783	3R_DroMel_CAF1	25,958,907 – 25,959,010	- - - - - - - - -	15626	25,958,907 – 25,959,010	+	6	110	81.46	-2.07	0.61	0.707388
9784	3R_DroMel_CAF1	25,960,090 – 25,960,187	- - - "knownCDS=Parent=FBtr0085582;Name=Tpi-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2171-RA" - - - - -	15627	25,960,090 – 25,960,187	+	6	97	79.73	-2.08	0.61	0.849707
9785	3R_DroMel_CAF1	25,960,942 – 25,961,053	- - - - - - - - -	15628	25,960,942 – 25,961,053	-	6	114	79.11	-1.41	0.70	0.746999
9786	3R_DroMel_CAF1	25,966,938 – 25,967,039	- - - - - - - - -	15629	25,966,938 – 25,967,039	-	6	117	75.22	-2.35	0.43	0.919804
9787	3R_DroMel_CAF1	25,967,368 – 25,967,466	- - - - - - - - -	15630	25,967,368 – 25,967,466	+	5	100	89.37	-2.23	0.68	0.561590
9788	3R_DroMel_CAF1	25,998,805 – 25,998,925	- - - "knownCDS=Parent=FBtr0089747;Name=Mlc2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2184-RA" - - - - -	15631	25,998,805 – 25,998,925	+	6	120	96.39	-0.91	0.92	0.500000
9789	3R_DroMel_CAF1	26,000,411 – 26,000,503	- - - - - - - - -	15632	26,000,411 – 26,000,503	-	6	97	88.80	-2.24	0.88	0.965021
9790	3R_DroMel_CAF1	26,000,717 – 26,000,847	- - - - - - - - -	15633	26,000,717 – 26,000,825	+	3	108	96.30	-2.25	0.93	0.892224
9790	3R_DroMel_CAF1	26,000,717 – 26,000,847	- - - - - - - - -	15634	26,000,747 – 26,000,847	+	6	106	77.16	-1.94	0.52	0.752942
9791	3R_DroMel_CAF1	26,003,712 – 26,003,832	- - - "knownCDS=Parent=FBtr0085568, FBtr0085569;Name=CG15530-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15530-RA, FlyBase+Annotation+IDs:CG15530-RB" - - - - -	15635	26,003,712 – 26,003,832	+	6	120	80.39	-2.06	0.67	0.867434
9792	3R_DroMel_CAF1	26,005,904 – 26,005,997	- - - - - - - - -	15636	26,005,904 – 26,005,997	-	4	111	80.76	-1.75	0.70	0.727347
9793	3R_DroMel_CAF1	26,009,840 – 26,009,935	- - - - - - - - -	15637	26,009,840 – 26,009,935	+	6	101	80.48	-2.04	0.62	0.800304
9793	3R_DroMel_CAF1	26,009,840 – 26,009,935	- - - - - - - - -	15638	26,009,840 – 26,009,935	-	6	101	80.48	-2.98	0.69	0.956053
9794	3R_DroMel_CAF1	26,014,871 – 26,014,976	- - - - - - - - -	15639	26,014,871 – 26,014,976	+	5	115	85.06	-2.28	0.60	0.627546
9795	3R_DroMel_CAF1	26,023,421 – 26,023,525	- - - - - - - - -	15640	26,023,421 – 26,023,525	-	5	112	68.53	-1.91	0.10	0.500000
9796	3R_DroMel_CAF1	26,028,497 – 26,028,595	- - - - - - - - -	15641	26,028,497 – 26,028,595	+	5	101	81.14	-1.60	0.67	0.547442
9797	3R_DroMel_CAF1	26,029,727 – 26,029,829	- - - - - - - - -	15642	26,029,727 – 26,029,829	+	4	110	82.86	-2.38	0.71	0.959021
9797	3R_DroMel_CAF1	26,029,727 – 26,029,829	- - - - - - - - -	15643	26,029,727 – 26,029,829	-	4	110	82.86	-1.98	0.73	0.864072
9798	3R_DroMel_CAF1	26,030,191 – 26,030,298	- - - - - - - - -	15644	26,030,191 – 26,030,298	-	4	108	88.06	-2.01	0.75	0.832293
9799	3R_DroMel_CAF1	26,032,893 – 26,033,022	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002597;Name=psi18S-1377d;Dbxref=FB:FBgn0083048 ,GB:AJ629210" - - - - - - - "Flybase=FBgn0065067:snoRNA:328:nuclear_small_nucleolar_RNA_gene\|1e-08"	15645	26,032,893 – 26,033,000	+	6	115	78.06	-2.06	0.68	0.947833
				15646	26,032,893 – 26,033,000	-	6	115	78.06	-1.65	0.72	0.905913
				15647	26,032,931 – 26,033,022	+	6	99	75.80	-1.78	0.76	0.969008
				15648	26,032,931 – 26,033,022	-	6	99	75.80	-1.92	0.76	0.977044
9800	3R_DroMel_CAF1	26,033,539 – 26,033,757	"known=snoRNA ID=Dmel\CG_RFAM_MAN_48002601;Name=psi28S-2626;Dbxref=FB:FBgn0082983 ,GB:AJ629206" - - "knownCDS=Parent=FBtr0089424;Name=RpS7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1883-RB" - - - - -	15649	26,033,539 – 26,033,647	-	6	115	79.22	-1.85	0.80	0.922356
9800	3R_DroMel_CAF1	26,033,539 – 26,033,757		15650	26,033,647 – 26,033,757	-	6	112	72.96	-1.19	0.63	0.593514
9801	3R_DroMel_CAF1	26,039,297 – 26,039,483	- - - "knownCDS=Parent=FBtr0085640;Name=CecB-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1878-RA" - - - - -	15651	26,039,297 – 26,039,405	+	5	113	85.79	-1.92	0.82	0.893586
				15652	26,039,297 – 26,039,405	-	5	113	85.79	-2.47	0.68	0.875117
				15653	26,039,365 – 26,039,483	-	6	120	84.10	-1.92	0.78	0.685113
9802	3R_DroMel_CAF1	26,040,524 – 26,040,618	- - - - - - - - -	15654	26,040,524 – 26,040,618	+	5	105	73.83	-1.55	0.11	0.707318
9803	3R_DroMel_CAF1	26,047,156 – 26,047,258	- - - - - - - - -	15655	26,047,156 – 26,047,258	+	6	117	75.64	-2.23	0.45	0.884345
9804	3R_DroMel_CAF1	26,048,990 – 26,049,128	- - - - - - - - -	15656	26,048,990 – 26,049,092	-	6	104	79.94	-2.11	0.49	0.513176
				15657	26,049,014 – 26,049,128	+	6	119	81.15	-2.76	0.47	0.685633
				15658	26,049,014 – 26,049,128	-	6	119	81.15	-2.41	0.50	0.587570
9805	3R_DroMel_CAF1	26,058,399 – 26,058,522	- - - - - - - - -	15659	26,058,399 – 26,058,492	+	6	106	82.49	-1.68	0.65	0.529471
9805	3R_DroMel_CAF1	26,058,399 – 26,058,522	- - - - - - - - -	15660	26,058,428 – 26,058,522	+	6	96	83.82	-2.18	0.75	0.726244
9806	3R_DroMel_CAF1	26,062,717 – 26,062,811	- - - - - - - - -	15661	26,062,717 – 26,062,811	+	5	107	78.14	-2.44	0.45	0.961250
9807	3R_DroMel_CAF1	26,062,908 – 26,063,001	- - - - - - - - -	15662	26,062,908 – 26,063,001	+	5	101	79.65	-1.45	0.72	0.547744
9808	3R_DroMel_CAF1	26,073,659 – 26,073,783	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000263;Name=Dmel_Leu_TAG_14000263;TFAMID=DmelLTAG-26073765" "tRNAscan=type:Leu:anticodon:TAG f:26073685_t:26073790_strand=-_cove=69.19" - - "Rfam=AF492848.1/496-417_RF00005;tRNA;\|3e-25" - - - "Flybase=FBgn0051023:CR31023:cytosolic_tRNA_gene\|2e-41"	15663	26,073,659 – 26,073,764	+	6	117	82.61	-1.20	0.95	0.568988
				15664	26,073,659 – 26,073,764	-	6	117	82.61	-2.28	0.95	0.975801
				15665	26,073,684 – 26,073,783	-	6	120	78.32	-2.75	0.90	0.975140
9809	3R_DroMel_CAF1	26,074,292 – 26,074,463	"known=tRNA ID=Dmel\CR_TRNA_ATT_14000264;Name=Dmel_Leu_TAG_14000264;TFAMID=DmelLTAG-26074417" "tRNAscan=type:Leu:anticodon:TAG f:26074337_t:26074461_strand=-_cove=69.19" - - "Rfam=AF492848.1/496-417_RF00005;tRNA;\|5e-25" - - - "Flybase=FBgn0051023:CR31023:cytosolic_tRNA_gene\|3e-41"	15666	26,074,292 – 26,074,390	+	6	103	79.10	-1.95	0.70	0.916306
				15667	26,074,292 – 26,074,390	-	6	103	79.10	-2.40	0.76	0.961735
				15668	26,074,324 – 26,074,430	-	6	116	82.05	-2.27	0.98	0.983961
				15669	26,074,350 – 26,074,463	-	6	120	78.64	-2.53	0.67	0.969997
9810	3R_DroMel_CAF1	26,076,967 – 26,077,104	- - - "knownCDS=Parent=FBtr0085617;Name=CG9682-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9682-RA" - - - - -	15670	26,076,967 – 26,077,064	+	6	97	83.78	-2.62	0.65	0.647330
				15671	26,076,984 – 26,077,104	+	5	120	87.17	-1.60	0.89	0.828482
				15672	26,076,984 – 26,077,104	-	5	120	87.17	-2.21	0.84	0.980083
9811	3R_DroMel_CAF1	26,080,011 – 26,080,109	- - - - - - - - -	15673	26,080,011 – 26,080,109	+	6	99	74.82	-1.66	0.52	0.585561
9812	3R_DroMel_CAF1	26,081,432 – 26,081,567	- - - - - - - - -	15674	26,081,432 – 26,081,546	+	5	115	93.50	-1.88	0.84	0.966174
9812	3R_DroMel_CAF1	26,081,432 – 26,081,567	- - - - - - - - -	15675	26,081,467 – 26,081,567	+	6	101	92.94	-2.40	0.89	0.992161
9813	3R_DroMel_CAF1	26,082,310 – 26,082,403	- - - - - - - - -	15676	26,082,310 – 26,082,403	+	6	109	79.58	-3.30	0.40	0.928926
9814	3R_DroMel_CAF1	26,084,795 – 26,084,904	- - - - - - - - -	15677	26,084,795 – 26,084,904	-	5	114	80.53	-1.83	0.55	0.508618
9815	3R_DroMel_CAF1	26,087,204 – 26,087,298	- - - - - - - - -	15678	26,087,204 – 26,087,298	+	5	97	80.90	-1.99	0.55	0.626802
9816	3R_DroMel_CAF1	26,087,515 – 26,087,607	- - - - - - - - -	15679	26,087,515 – 26,087,607	+	5	106	68.92	-1.51	0.53	0.522695
9817	3R_DroMel_CAF1	26,090,496 – 26,090,592	- - - - - - - - -	15680	26,090,496 – 26,090,592	+	6	108	72.98	-2.43	0.47	0.985032
9817	3R_DroMel_CAF1	26,090,496 – 26,090,592	- - - - - - - - -	15681	26,090,496 – 26,090,592	-	6	108	72.98	-3.02	0.35	0.994690
9818	3R_DroMel_CAF1	26,092,008 – 26,092,105	- - - - - - - - -	15682	26,092,008 – 26,092,105	+	6	108	77.45	-1.93	0.49	0.609960
9819	3R_DroMel_CAF1	26,095,956 – 26,096,053	- - - - - - - - -	15683	26,095,956 – 26,096,053	-	5	97	84.15	-2.15	0.75	0.904774
9820	3R_DroMel_CAF1	26,098,773 – 26,098,870	- - - - - - - - -	15684	26,098,773 – 26,098,870	+	5	100	76.70	-1.82	0.54	0.683187
9821	3R_DroMel_CAF1	26,100,823 – 26,100,925	- - - - - - - - -	15685	26,100,823 – 26,100,925	+	6	120	81.31	-2.08	0.65	0.782163
9822	3R_DroMel_CAF1	26,113,119 – 26,113,217	- - - - - - - - -	15686	26,113,119 – 26,113,217	-	6	118	84.42	-1.86	0.79	0.647560
9823	3R_DroMel_CAF1	26,130,815 – 26,130,925	- - "RNAmicro=f:26130815_t:26130924_strand:+_p:0.996439" - - - - - -	15687	26,130,815 – 26,130,925	+	5	110	87.91	-2.50	0.71	0.891753
9823	3R_DroMel_CAF1	26,130,815 – 26,130,925		15688	26,130,815 – 26,130,925	-	5	110	87.91	-2.65	0.85	0.997681
9824	3R_DroMel_CAF1	26,132,163 – 26,132,255	- - - - - - - - -	15689	26,132,163 – 26,132,255	+	6	96	72.36	-2.03	0.35	0.662042
9824	3R_DroMel_CAF1	26,132,163 – 26,132,255	- - - - - - - - -	15690	26,132,163 – 26,132,255	-	6	96	72.36	-1.70	0.66	0.963958
9825	3R_DroMel_CAF1	26,132,828 – 26,132,961	- - - - - - - - -	15691	26,132,828 – 26,132,931	-	6	120	80.18	-2.63	0.52	0.870244
9825	3R_DroMel_CAF1	26,132,828 – 26,132,961	- - - - - - - - -	15692	26,132,865 – 26,132,961	+	6	115	79.80	-2.23	0.54	0.782886
9826	3R_DroMel_CAF1	26,133,432 – 26,133,530	- - - - - - - - -	15693	26,133,432 – 26,133,530	+	5	98	87.41	-2.03	0.74	0.814546
9826	3R_DroMel_CAF1	26,133,432 – 26,133,530	- - - - - - - - -	15694	26,133,432 – 26,133,530	-	5	98	87.41	-1.70	0.74	0.628052
9827	3R_DroMel_CAF1	26,134,644 – 26,134,745	- - - - - - - - -	15695	26,134,644 – 26,134,745	+	5	107	88.28	-4.59	0.63	0.951004
9827	3R_DroMel_CAF1	26,134,644 – 26,134,745	- - - - - - - - -	15696	26,134,644 – 26,134,745	-	5	107	88.28	-2.49	0.72	0.906883
9828	3R_DroMel_CAF1	26,135,699 – 26,135,803	- - - - - - - - -	15697	26,135,699 – 26,135,803	-	5	104	90.87	-2.20	0.91	0.998696
9829	3R_DroMel_CAF1	26,137,454 – 26,137,546	- - - - - - - - -	15698	26,137,454 – 26,137,546	+	5	100	81.22	-2.57	0.73	0.985003
9829	3R_DroMel_CAF1	26,137,454 – 26,137,546	- - - - - - - - -	15699	26,137,454 – 26,137,546	-	5	100	81.22	-1.99	0.70	0.864040
9830	3R_DroMel_CAF1	26,142,513 – 26,142,608	- - - - - - - - -	15700	26,142,513 – 26,142,608	+	6	107	78.28	-1.69	0.81	0.925403
9831	3R_DroMel_CAF1	26,152,125 – 26,152,217	- - - - - - - - -	15701	26,152,125 – 26,152,217	-	6	105	74.70	-1.64	0.56	0.762133
9832	3R_DroMel_CAF1	26,154,096 – 26,154,195	- - - - - - - - -	15702	26,154,096 – 26,154,195	+	6	112	71.29	-1.92	0.41	0.781217
9833	3R_DroMel_CAF1	26,155,846 – 26,155,957	- - - - - - - - -	15703	26,155,846 – 26,155,957	+	6	119	79.44	-2.42	0.44	0.649051
9833	3R_DroMel_CAF1	26,155,846 – 26,155,957	- - - - - - - - -	15704	26,155,846 – 26,155,957	-	6	119	79.44	-2.46	0.45	0.704597
9834	3R_DroMel_CAF1	26,161,644 – 26,161,742	- - - - - - - - -	15705	26,161,644 – 26,161,742	-	5	102	86.61	-1.86	0.70	0.627503
9835	3R_DroMel_CAF1	26,165,719 – 26,165,809	- - - - - - - - -	15706	26,165,719 – 26,165,809	+	5	90	90.93	-1.61	0.75	0.537715
9836	3R_DroMel_CAF1	26,169,106 – 26,169,197	- - - - - - - - -	15707	26,169,106 – 26,169,197	-	5	109	78.11	-1.52	0.71	0.701101
9837	3R_DroMel_CAF1	26,170,136 – 26,170,227	- - - - - - - - -	15708	26,170,136 – 26,170,227	+	6	93	82.79	-2.06	0.67	0.652415
9838	3R_DroMel_CAF1	26,174,538 – 26,174,628	- - - - - - - - -	15709	26,174,538 – 26,174,628	+	5	90	73.12	-1.85	0.41	0.756495
9839	3R_DroMel_CAF1	26,185,677 – 26,185,779	- - - "knownCDS=Parent=FBtr0085619, FBtr0085620, FBtr0085621;Name=hdc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15532-RA, FlyBase+Annotation+IDs:CG15532-RB, FlyBase+Annotation+IDs:CG15532-RC" - - - - -	15710	26,185,677 – 26,185,779	+	6	109	81.21	-1.26	0.77	0.587804
9840	3R_DroMel_CAF1	26,186,055 – 26,186,154	- - - - - - - - -	15711	26,186,055 – 26,186,154	-	6	105	76.20	-1.17	0.80	0.875970
9841	3R_DroMel_CAF1	26,186,332 – 26,186,428	- - - "knownCDS=Parent=FBtr0085621;Name=hdc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15532-RC" - - - - -	15712	26,186,332 – 26,186,428	-	6	120	84.62	-1.82	0.74	0.505354
9842	3R_DroMel_CAF1	26,189,787 – 26,189,889	- - - - - - - - -	15713	26,189,787 – 26,189,889	-	5	102	92.63	-1.21	0.97	0.838550
9843	3R_DroMel_CAF1	26,193,750 – 26,193,851	- - - - - - - - -	15714	26,193,750 – 26,193,851	-	4	108	86.41	-2.45	0.65	0.809612
9844	3R_DroMel_CAF1	26,196,369 – 26,196,479	- - - - - - - - -	15715	26,196,369 – 26,196,479	+	6	115	81.39	-1.53	0.83	0.749044
9845	3R_DroMel_CAF1	26,197,401 – 26,197,517	- - - - - - - - -	15716	26,197,401 – 26,197,517	+	6	119	92.71	-2.36	0.86	0.964600
9846	3R_DroMel_CAF1	26,210,139 – 26,210,230	- - - - - - - - -	15717	26,210,139 – 26,210,230	+	5	107	77.21	-1.24	0.79	0.725809
9846	3R_DroMel_CAF1	26,210,139 – 26,210,230	- - - - - - - - -	15718	26,210,139 – 26,210,230	-	5	107	77.21	-1.28	0.73	0.594016
9847	3R_DroMel_CAF1	26,230,631 – 26,230,741	- - - - - - - - -	15719	26,230,631 – 26,230,741	+	6	114	79.72	-2.23	0.79	0.943965
9847	3R_DroMel_CAF1	26,230,631 – 26,230,741	- - - - - - - - -	15720	26,230,631 – 26,230,741	-	6	114	79.72	-1.92	0.81	0.919115
9848	3R_DroMel_CAF1	26,231,392 – 26,231,487	- - - - - - - - -	15721	26,231,392 – 26,231,487	-	6	97	71.55	-1.71	0.48	0.721443
9849	3R_DroMel_CAF1	26,236,458 – 26,236,550	- - - - - - - - -	15722	26,236,458 – 26,236,550	+	6	101	86.99	-1.35	0.88	0.505182
9850	3R_DroMel_CAF1	26,236,882 – 26,236,979	- - - - - - - - -	15723	26,236,882 – 26,236,979	+	6	106	79.97	-1.99	0.54	0.592986
9851	3R_DroMel_CAF1	26,246,468 – 26,246,568	- - - - - - - - -	15724	26,246,468 – 26,246,568	-	3	100	82.00	-0.44	0.94	0.704685
9852	3R_DroMel_CAF1	26,248,134 – 26,248,294	- - - "knownCDS=Parent=FBtr0085630;Name=CG2217-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2217-RA" - - - - -	15725	26,248,134 – 26,248,254	-	5	120	93.83	-1.79	0.91	0.991499
9852	3R_DroMel_CAF1	26,248,134 – 26,248,294		15726	26,248,174 – 26,248,294	-	5	120	94.67	-1.57	0.88	0.933010
9853	3R_DroMel_CAF1	26,249,558 – 26,249,671	- - - - - - - - -	15727	26,249,558 – 26,249,671	-	5	117	82.16	-2.53	0.72	0.975731
9854	3R_DroMel_CAF1	26,249,892 – 26,250,007	- - - "knownCDS=Parent=FBtr0085625;Name=mRpS18C-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9688-RA" - - - - -	15728	26,249,892 – 26,250,007	-	6	120	73.70	-1.77	0.53	0.827272
9855	3R_DroMel_CAF1	26,250,765 – 26,250,886	- - - "knownCDS=Parent=FBtr0085628;Name=CG15536-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15536-RA" - - - - -	15729	26,250,765 – 26,250,861	+	6	96	83.33	-2.54	0.66	0.692434
				15730	26,250,765 – 26,250,861	-	6	96	83.33	-2.08	0.80	0.802097
				15731	26,250,786 – 26,250,886	+	6	100	81.39	-2.39	0.72	0.893992
				15732	26,250,786 – 26,250,886	-	6	100	81.39	-1.23	0.79	0.563442
9856	3R_DroMel_CAF1	26,256,899 – 26,256,989	- - - "knownCDS=Parent=FBtr0085626;Name=CG15533-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15533-RA" - - - - -	15733	26,256,899 – 26,256,989	+	6	90	79.63	-1.47	0.73	0.786590
9857	3R_DroMel_CAF1	26,267,579 – 26,267,669	- - - - - - - - -	15734	26,267,579 – 26,267,669	-	6	90	97.48	-1.39	0.89	0.730936
9858	3R_DroMel_CAF1	26,267,998 – 26,268,088	- - - - - - - - -	15735	26,267,998 – 26,268,088	+	5	96	83.96	-1.80	0.66	0.584113
9858	3R_DroMel_CAF1	26,267,998 – 26,268,088	- - - - - - - - -	15736	26,267,998 – 26,268,088	-	5	96	83.96	-1.97	0.62	0.607911
9859	3R_DroMel_CAF1	26,274,749 – 26,274,856	- - - "knownCDS=Parent=FBtr0085693;Name=aralar1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2139-RB" - - - - -	15737	26,274,749 – 26,274,856	-	6	111	78.33	-1.27	0.69	0.677963
9860	3R_DroMel_CAF1	26,293,847 – 26,293,944	- - - - - - - - -	15738	26,293,847 – 26,293,944	-	4	107	65.82	-1.41	0.54	0.710989
9861	3R_DroMel_CAF1	26,301,559 – 26,301,657	- - - - - - - - -	15739	26,301,559 – 26,301,657	+	5	115	72.42	-1.65	0.16	0.696307
9862	3R_DroMel_CAF1	26,303,056 – 26,303,158	- - - "knownCDS=Parent=FBtr0085651;Name=spdo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31020-RA" - - - - -	15740	26,303,056 – 26,303,158	-	6	114	81.48	-1.25	0.76	0.562299
9863	3R_DroMel_CAF1	26,303,425 – 26,303,545	- - - "knownCDS=Parent=FBtr0085651;Name=spdo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31020-RA" - - - - -	15741	26,303,425 – 26,303,545	-	6	120	80.22	-1.89	0.60	0.705512
9864	3R_DroMel_CAF1	26,308,683 – 26,308,792	- - "RNAmicro=f:26308683_t:26308801_strand:+_p:0.718735" - - - - - -	15742	26,308,683 – 26,308,792	+	4	119	70.26	-2.94	0.59	0.999895
9865	3R_DroMel_CAF1	26,310,598 – 26,310,754	- - - - - - - - -	15743	26,310,598 – 26,310,715	-	4	120	89.31	-2.44	0.68	0.730174
9865	3R_DroMel_CAF1	26,310,598 – 26,310,754	- - - - - - - - -	15744	26,310,636 – 26,310,754	-	4	120	86.41	-1.43	0.76	0.544606
9866	3R_DroMel_CAF1	26,310,892 – 26,310,999	- - - - - - - - -	15745	26,310,892 – 26,310,999	+	6	109	74.93	-1.55	0.71	0.939592
9867	3R_DroMel_CAF1	26,311,173 – 26,311,281	- - - "knownCDS=Parent=FBtr0085650;Name=PH4alphaEFB-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31022-RA" - - - - -	15746	26,311,173 – 26,311,281	+	6	115	73.95	-1.70	0.52	0.688048
9868	3R_DroMel_CAF1	26,313,227 – 26,313,347	- - - "knownCDS=Parent=FBtr0085690;Name=Jon99Fii-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2229-RA" - - - - -	15747	26,313,227 – 26,313,347	+	5	120	92.83	-1.71	0.90	0.984746
9869	3R_DroMel_CAF1	26,313,427 – 26,313,526	- - - "knownCDS=Parent=FBtr0085690;Name=Jon99Fii-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2229-RA" - - - - -	15748	26,313,427 – 26,313,526	-	5	120	86.96	-1.76	0.86	0.890168
9870	3R_DroMel_CAF1	26,314,991 – 26,315,111	- - - "knownCDS=Parent=FBtr0085652;Name=Jon99Fi-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18030-RA" - - - - -	15749	26,314,991 – 26,315,111	-	6	120	94.28	-1.24	0.92	0.825785
9871	3R_DroMel_CAF1	26,316,849 – 26,316,969	- - - "knownCDS=Parent=FBtr0085654;Name=PH4alphaSG2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1546-RB" - - - - -	15750	26,316,849 – 26,316,969	-	6	120	82.50	-1.56	0.76	0.633368
9872	3R_DroMel_CAF1	26,317,874 – 26,317,976	- - - - - - - - -	15751	26,317,874 – 26,317,976	-	6	104	80.07	-1.22	0.73	0.617533
9873	3R_DroMel_CAF1	26,318,450 – 26,318,561	- - - "knownCDS=Parent=FBtr0085689;Name=PH4alphaMP-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9726-RA" - - - - -	15752	26,318,450 – 26,318,561	+	6	111	76.40	-1.92	0.54	0.826151
9873	3R_DroMel_CAF1	26,318,450 – 26,318,561		15753	26,318,450 – 26,318,561	-	6	111	76.40	-1.90	0.53	0.788916
9874	3R_DroMel_CAF1	26,321,822 – 26,321,913	- - - - - - - - -	15754	26,321,822 – 26,321,913	-	6	94	81.35	-1.48	0.65	0.529659
9875	3R_DroMel_CAF1	26,330,450 – 26,330,563	- - - "knownCDS=Parent=FBtr0085686;Name=PH4alphaSG1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31014-RA" - - - - -	15755	26,330,450 – 26,330,563	+	6	113	78.17	-1.59	0.58	0.602557
9876	3R_DroMel_CAF1	26,332,634 – 26,332,749	- - - "knownCDS=Parent=FBtr0085655;Name=CG15539-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15539-RA" - - - - -	15756	26,332,634 – 26,332,749	+	6	120	74.30	-1.86	0.53	0.855589
9877	3R_DroMel_CAF1	26,344,363 – 26,344,455	- - - - - - - - -	15757	26,344,363 – 26,344,455	+	6	109	73.81	-2.24	0.65	0.989678
9877	3R_DroMel_CAF1	26,344,363 – 26,344,455	- - - - - - - - -	15758	26,344,363 – 26,344,455	-	6	109	73.81	-2.25	0.70	0.990938
9878	3R_DroMel_CAF1	26,346,562 – 26,346,656	- - - - - - - - -	15759	26,346,562 – 26,346,656	+	6	95	83.30	-2.38	0.82	0.898822
9878	3R_DroMel_CAF1	26,346,562 – 26,346,656	- - - - - - - - -	15760	26,346,562 – 26,346,656	-	6	95	83.30	-2.24	0.79	0.828919
9879	3R_DroMel_CAF1	26,351,903 – 26,352,001	- - - - - - - - -	15761	26,351,903 – 26,352,001	-	6	115	75.83	-0.92	0.74	0.660806
9880	3R_DroMel_CAF1	26,354,659 – 26,354,824	- - - - - - - - -	15762	26,354,659 – 26,354,773	-	6	114	92.81	-3.28	0.88	0.998888
				15763	26,354,694 – 26,354,793	-	6	119	83.72	-3.30	0.74	0.901149
				15764	26,354,734 – 26,354,824	+	6	119	80.37	-1.81	0.61	0.683305
9881	3R_DroMel_CAF1	26,357,102 – 26,357,212	- - - - - - - - -	15765	26,357,102 – 26,357,212	-	6	118	82.86	-1.77	0.70	0.609240
9882	3R_DroMel_CAF1	26,364,306 – 26,364,422	- - - - - - - - -	15766	26,364,306 – 26,364,422	-	5	116	90.55	-1.55	0.79	0.665051
9883	3R_DroMel_CAF1	26,376,302 – 26,376,409	- - - - - - - - -	15767	26,376,302 – 26,376,409	+	6	120	80.11	-1.57	0.66	0.689640
9883	3R_DroMel_CAF1	26,376,302 – 26,376,409	- - - - - - - - -	15768	26,376,302 – 26,376,409	-	6	120	80.11	-1.64	0.63	0.663700
9884	3R_DroMel_CAF1	26,381,878 – 26,381,974	- - - - - - - - -	15769	26,381,878 – 26,381,974	+	6	109	77.24	-1.38	0.64	0.683243
9885	3R_DroMel_CAF1	26,384,808 – 26,384,901	- - - - - - - - -	15770	26,384,808 – 26,384,901	-	5	113	76.65	-2.04	0.71	0.974085
9886	3R_DroMel_CAF1	26,392,127 – 26,392,232	- - - - - - - - -	15771	26,392,127 – 26,392,232	+	5	106	92.66	-1.71	0.76	0.619637
9887	3R_DroMel_CAF1	26,394,853 – 26,394,951	- - - - - - - - -	15772	26,394,853 – 26,394,951	+	6	105	66.16	-1.80	0.49	0.916945
9887	3R_DroMel_CAF1	26,394,853 – 26,394,951	- - - - - - - - -	15773	26,394,853 – 26,394,951	-	6	105	66.16	-2.61	0.60	0.993342
9888	3R_DroMel_CAF1	26,396,546 – 26,396,637	- - - - - - - - -	15774	26,396,546 – 26,396,637	+	6	107	83.81	-2.10	0.78	0.749364
9889	3R_DroMel_CAF1	26,398,363 – 26,398,483	- - - "knownCDS=Parent=FBtr0085660;Name=tmod-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1539-RF" - - - - -	15775	26,398,363 – 26,398,483	-	6	120	90.78	-1.22	0.90	0.613830
9890	3R_DroMel_CAF1	26,401,499 – 26,401,593	- - - - - - - - -	15776	26,401,499 – 26,401,593	+	5	94	95.53	-2.56	0.96	0.999938
9890	3R_DroMel_CAF1	26,401,499 – 26,401,593	- - - - - - - - -	15777	26,401,499 – 26,401,593	-	5	94	95.53	-3.73	0.92	0.999956
9891	3R_DroMel_CAF1	26,401,709 – 26,401,801	- - - - - - - - -	15778	26,401,709 – 26,401,801	+	5	93	97.19	-1.97	0.93	0.995368
9892	3R_DroMel_CAF1	26,411,964 – 26,412,084	- - - "knownCDS=Parent=FBtr0085679;Name=CG9717-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9717-RA" - - - - -	15779	26,411,964 – 26,412,084	-	6	120	77.56	-1.93	0.51	0.690212
9893	3R_DroMel_CAF1	26,414,968 – 26,415,059	- - - - - - - - -	15780	26,414,968 – 26,415,059	+	6	100	82.06	-1.99	0.72	0.775053
9893	3R_DroMel_CAF1	26,414,968 – 26,415,059	- - - - - - - - -	15781	26,414,968 – 26,415,059	-	6	100	82.06	-1.39	0.68	0.500000
9894	3R_DroMel_CAF1	26,424,017 – 26,424,116	- - - "knownCDS=Parent=FBtr0085665;Name=CG31019-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31019-RA" - - - - -	15782	26,424,017 – 26,424,116	+	6	102	78.33	-1.02	0.76	0.636868
9894	3R_DroMel_CAF1	26,424,017 – 26,424,116		15783	26,424,017 – 26,424,116	-	6	102	78.33	-1.37	0.78	0.845902
9895	3R_DroMel_CAF1	26,424,409 – 26,424,502	- - - "knownCDS=Parent=FBtr0085665;Name=CG31019-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31019-RA" - - - - -	15784	26,424,409 – 26,424,502	+	6	95	89.18	-1.95	0.83	0.701126
9896	3R_DroMel_CAF1	26,430,112 – 26,430,210	- - - "knownCDS=Parent=FBtr0085667;Name=PH4alphaNE3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31017-RA" - - - - -	15785	26,430,112 – 26,430,210	-	6	98	78.78	-1.57	0.66	0.776816
9897	3R_DroMel_CAF1	26,432,607 – 26,432,719	- - - "knownCDS=Parent=FBtr0085668;Name=CG31016-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31016-RA" - - - - -	15786	26,432,607 – 26,432,719	-	6	112	81.96	-2.35	0.61	0.741544
9898	3R_DroMel_CAF1	26,436,923 – 26,437,013	- - - "knownCDS=texon4265;Parent=CG_RGUI_GID_mRNA_40009995, CG_DGIL_SNO_28368373" - - - - -	15787	26,436,923 – 26,437,013	-	6	96	65.21	-1.46	0.47	0.633277
9899	3R_DroMel_CAF1	26,445,299 – 26,445,395	- - - - - - - - -	15788	26,445,299 – 26,445,395	+	5	109	91.11	-1.82	0.77	0.782573
9899	3R_DroMel_CAF1	26,445,299 – 26,445,395	- - - - - - - - -	15789	26,445,299 – 26,445,395	-	5	109	91.11	-2.61	0.81	0.993925
9900	3R_DroMel_CAF1	26,453,144 – 26,453,248	- - - - - - - - -	15790	26,453,144 – 26,453,248	-	6	107	82.48	-1.53	0.67	0.516743
9901	3R_DroMel_CAF1	26,454,683 – 26,454,778	- - - - - - - - -	15791	26,454,683 – 26,454,778	-	6	100	79.03	-2.01	0.67	0.913712
9902	3R_DroMel_CAF1	26,457,260 – 26,457,350	- - - - - - - - -	15792	26,457,260 – 26,457,350	+	6	92	93.82	-2.02	0.90	0.987049
9903	3R_DroMel_CAF1	26,457,552 – 26,457,660	- - - - - - - - -	15793	26,457,552 – 26,457,660	-	5	109	92.44	-1.15	0.89	0.540393
9904	3R_DroMel_CAF1	26,458,383 – 26,458,477	- - - - - - - - -	15794	26,458,383 – 26,458,477	+	6	112	80.20	-1.27	0.66	0.500000
9904	3R_DroMel_CAF1	26,458,383 – 26,458,477	- - - - - - - - -	15795	26,458,383 – 26,458,477	-	6	112	80.20	-1.14	0.79	0.601193
9905	3R_DroMel_CAF1	26,460,046 – 26,460,137	- - - - - - - - -	15796	26,460,046 – 26,460,137	+	5	99	72.14	-1.66	0.31	0.508583
9906	3R_DroMel_CAF1	26,462,897 – 26,462,995	- - - - - - - - -	15797	26,462,897 – 26,462,995	-	6	116	84.17	-1.62	0.80	0.575235
9907	3R_DroMel_CAF1	26,465,356 – 26,465,486	- - - - - - - - -	15798	26,465,356 – 26,465,456	-	6	109	75.69	-1.14	0.73	0.801497
9907	3R_DroMel_CAF1	26,465,356 – 26,465,486	- - - - - - - - -	15799	26,465,379 – 26,465,486	-	6	114	86.75	-2.41	0.83	0.869961
9908	3R_DroMel_CAF1	26,466,946 – 26,467,042	- - - - - - - - -	15800	26,466,946 – 26,467,042	+	6	120	82.15	-2.14	0.77	0.847702
9908	3R_DroMel_CAF1	26,466,946 – 26,467,042	- - - - - - - - -	15801	26,466,946 – 26,467,042	-	6	120	82.15	-1.66	0.88	0.812591
9909	3R_DroMel_CAF1	26,471,435 – 26,471,527	- - - "knownCDS=Parent=FBtr0085671;Name=CG31013-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31013-RA" - - - - -	15802	26,471,435 – 26,471,527	+	6	93	78.34	-2.68	0.44	0.900460
9910	3R_DroMel_CAF1	26,471,880 – 26,471,972	- - - - - - - - -	15803	26,471,880 – 26,471,972	-	5	97	75.84	-1.83	0.28	0.727547
9911	3R_DroMel_CAF1	26,475,202 – 26,475,316	- - "RNAmicro=f:26475202_t:26475321_strand:+_p:0.982872" "knownCDS=Parent=FBtr0085669;Name=CG15541-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15541-RA" - - - - -	15804	26,475,202 – 26,475,316	+	6	120	76.44	-1.78	0.69	0.944879
9912	3R_DroMel_CAF1	26,476,332 – 26,476,441	- - - - - - - - -	15805	26,476,332 – 26,476,441	+	6	117	68.17	-1.37	0.57	0.738444
9913	3R_DroMel_CAF1	26,479,127 – 26,479,228	- - - - - - - - -	15806	26,479,127 – 26,479,228	-	6	120	78.74	-1.27	0.67	0.618809
9914	3R_DroMel_CAF1	26,482,389 – 26,482,481	- - - - - - - - -	15807	26,482,389 – 26,482,481	-	6	111	74.98	-1.80	0.52	0.760209
9915	3R_DroMel_CAF1	26,487,942 – 26,488,039	- - - - - - - - -	15808	26,487,942 – 26,488,039	+	6	104	79.34	-2.06	0.65	0.898383
9915	3R_DroMel_CAF1	26,487,942 – 26,488,039	- - - - - - - - -	15809	26,487,942 – 26,488,039	-	6	104	79.34	-1.65	0.70	0.835294
9916	3R_DroMel_CAF1	26,495,354 – 26,495,462	- - - - - - - - -	15810	26,495,354 – 26,495,462	+	5	108	79.42	-2.61	0.86	0.994742
9916	3R_DroMel_CAF1	26,495,354 – 26,495,462	- - - - - - - - -	15811	26,495,354 – 26,495,462	-	5	108	79.42	-1.76	0.75	0.852221
9917	3R_DroMel_CAF1	26,495,695 – 26,495,796	- - - - - - - - -	15812	26,495,695 – 26,495,796	+	6	120	79.55	-2.47	0.56	0.908050
9918	3R_DroMel_CAF1	26,501,827 – 26,501,917	- - - "knownCDS=texon4270;Parent=CG_RGUI_GID_mRNA_40010000, CG_DGIL_SNO_28368381" - - - - -	15813	26,501,827 – 26,501,917	-	6	93	85.37	-2.91	0.72	0.678653
9919	3R_DroMel_CAF1	26,523,065 – 26,523,156	- - - - - - - - -	15814	26,523,065 – 26,523,156	-	5	97	85.97	-2.48	0.68	0.865704
9920	3R_DroMel_CAF1	26,525,619 – 26,525,731	- - - - - - - - -	15815	26,525,619 – 26,525,731	+	6	118	80.27	-2.18	0.72	0.913347
9920	3R_DroMel_CAF1	26,525,619 – 26,525,731	- - - - - - - - -	15816	26,525,619 – 26,525,731	-	6	118	80.27	-2.47	0.70	0.937431
9921	3R_DroMel_CAF1	26,541,406 – 26,541,512	- - - - - - - - -	15817	26,541,406 – 26,541,512	+	5	106	77.52	-2.39	0.65	0.988194
9921	3R_DroMel_CAF1	26,541,406 – 26,541,512	- - - - - - - - -	15818	26,541,406 – 26,541,512	-	5	106	77.52	-1.54	0.73	0.796027
9922	3R_DroMel_CAF1	26,545,484 – 26,545,578	- - - - - - - - -	15819	26,545,484 – 26,545,578	+	6	116	84.56	-2.14	0.75	0.629647
9923	3R_DroMel_CAF1	26,549,065 – 26,549,156	- - - - - - - - -	15820	26,549,065 – 26,549,156	+	5	91	80.46	-1.94	0.72	0.877663
9923	3R_DroMel_CAF1	26,549,065 – 26,549,156	- - - - - - - - -	15821	26,549,065 – 26,549,156	-	5	91	80.46	-1.63	0.70	0.637665
9924	3R_DroMel_CAF1	26,554,143 – 26,554,243	- - - - - - - - -	15822	26,554,143 – 26,554,243	+	6	103	86.93	-3.36	0.85	0.986081
9924	3R_DroMel_CAF1	26,554,143 – 26,554,243	- - - - - - - - -	15823	26,554,143 – 26,554,243	-	6	103	86.93	-3.26	0.82	0.962886
9925	3R_DroMel_CAF1	26,556,360 – 26,556,476	- - - "knownCDS=Parent=FBtr0085724;Name=CG11313-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11313-RA" - - - - -	15824	26,556,360 – 26,556,476	-	5	120	69.80	-1.73	0.34	0.544024
9926	3R_DroMel_CAF1	26,563,173 – 26,563,279	- - - - - - - - -	15825	26,563,173 – 26,563,279	+	6	111	74.77	-2.37	0.29	0.630140
9927	3R_DroMel_CAF1	26,568,149 – 26,568,242	- - - - - - - - -	15826	26,568,149 – 26,568,242	-	6	108	78.57	-1.13	0.69	0.575560
9928	3R_DroMel_CAF1	26,571,286 – 26,571,377	- - - - - - - - -	15827	26,571,286 – 26,571,377	+	3	105	81.59	-1.63	0.67	0.510100
9929	3R_DroMel_CAF1	26,578,598 – 26,578,715	- - - - - - - - -	15828	26,578,598 – 26,578,715	+	6	120	94.22	-2.42	0.94	0.999618
9929	3R_DroMel_CAF1	26,578,598 – 26,578,715	- - - - - - - - -	15829	26,578,598 – 26,578,715	-	6	120	94.22	-2.73	0.96	0.999924
9930	3R_DroMel_CAF1	26,579,087 – 26,579,185	- - - - - - - - -	15830	26,579,087 – 26,579,185	-	5	98	73.20	-1.74	0.42	0.572220
9931	3R_DroMel_CAF1	26,580,014 – 26,580,148	- - - - - - - - -	15831	26,580,014 – 26,580,115	+	6	112	78.27	-2.05	0.58	0.870289
				15832	26,580,014 – 26,580,115	-	6	112	78.27	-2.12	0.58	0.898882
				15833	26,580,053 – 26,580,148	+	6	97	94.22	-2.08	0.83	0.752523
9932	3R_DroMel_CAF1	26,580,404 – 26,580,516	- - - - - - - - -	15834	26,580,404 – 26,580,516	-	5	114	75.40	-1.85	0.35	0.694070
9933	3R_DroMel_CAF1	26,583,118 – 26,583,209	- - - - - - - - -	15835	26,583,118 – 26,583,209	+	6	108	81.14	-3.20	0.61	0.942275
9933	3R_DroMel_CAF1	26,583,118 – 26,583,209	- - - - - - - - -	15836	26,583,118 – 26,583,209	-	6	108	81.14	-2.86	0.67	0.930957
9934	3R_DroMel_CAF1	26,584,060 – 26,584,156	- - - - - - - - -	15837	26,584,060 – 26,584,156	+	5	98	74.38	-2.06	0.46	0.922333
9935	3R_DroMel_CAF1	26,584,736 – 26,584,829	- - - - - - - - -	15838	26,584,736 – 26,584,829	+	6	108	77.98	-2.59	0.61	0.976548
9935	3R_DroMel_CAF1	26,584,736 – 26,584,829	- - - - - - - - -	15839	26,584,736 – 26,584,829	-	6	108	77.98	-2.43	0.61	0.967101
9936	3R_DroMel_CAF1	26,592,645 – 26,592,763	- - - - - - - - -	15840	26,592,645 – 26,592,763	-	5	119	82.09	-1.70	0.72	0.666360
9937	3R_DroMel_CAF1	26,600,181 – 26,600,298	- - - "knownCDS=Parent=FBtr0085701, FBtr0100269;Name=zfh1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1322-RB, FlyBase+Annotation+IDs:CG1322-RC" - - - - -	15841	26,600,181 – 26,600,298	+	6	117	81.04	-1.34	0.69	0.561267
9938	3R_DroMel_CAF1	26,602,328 – 26,602,423	- - - - - - - - -	15842	26,602,328 – 26,602,423	-	6	96	76.64	-2.52	0.49	0.965268
9939	3R_DroMel_CAF1	26,604,631 – 26,604,726	- - - - - - - - -	15843	26,604,631 – 26,604,726	-	4	101	85.08	-1.69	0.66	0.589322
9940	3R_DroMel_CAF1	26,605,500 – 26,605,596	- - - - - - - - -	15844	26,605,500 – 26,605,596	+	6	102	81.25	-1.66	0.64	0.614707
9941	3R_DroMel_CAF1	26,608,631 – 26,608,726	- - - - - - - - -	15845	26,608,631 – 26,608,726	+	6	112	75.99	-1.79	0.55	0.775611
9942	3R_DroMel_CAF1	26,610,570 – 26,610,684	- - - "knownCDS=Parent=FBtr0100269;Name=zfh1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1322-RC" - - - - -	15846	26,610,570 – 26,610,684	+	5	114	97.19	-1.37	0.93	0.856064
9942	3R_DroMel_CAF1	26,610,570 – 26,610,684		15847	26,610,570 – 26,610,684	-	5	114	97.19	-2.07	1.00	0.999358
9943	3R_DroMel_CAF1	26,617,443 – 26,617,542	- - - - - - - - -	15848	26,617,443 – 26,617,542	+	6	99	77.51	-1.18	0.66	0.540791
9944	3R_DroMel_CAF1	26,624,522 – 26,624,621	- - - - - - - - -	15849	26,624,522 – 26,624,621	+	4	99	80.68	-2.19	0.57	0.756283
9945	3R_DroMel_CAF1	26,624,767 – 26,624,857	- - - - - - - - -	15850	26,624,767 – 26,624,857	-	6	93	66.90	-1.78	0.33	0.529228
9946	3R_DroMel_CAF1	26,632,303 – 26,632,396	- - - - - - - - -	15851	26,632,303 – 26,632,396	-	5	93	87.73	-2.48	0.71	0.893180
9947	3R_DroMel_CAF1	26,634,450 – 26,634,584	- - - - - - - - -	15852	26,634,450 – 26,634,544	+	3	94	95.74	-1.88	0.86	0.508683
9947	3R_DroMel_CAF1	26,634,450 – 26,634,584	- - - - - - - - -	15853	26,634,482 – 26,634,584	+	5	120	79.59	-2.19	0.52	0.842338
9948	3R_DroMel_CAF1	26,638,819 – 26,638,913	- - - - - - - - -	15854	26,638,819 – 26,638,913	-	6	115	70.26	-1.67	0.42	0.513836
9949	3R_DroMel_CAF1	26,661,388 – 26,661,482	- - - - - - - - -	15855	26,661,388 – 26,661,482	+	6	96	82.00	-1.86	0.66	0.655178
9949	3R_DroMel_CAF1	26,661,388 – 26,661,482	- - - - - - - - -	15856	26,661,388 – 26,661,482	-	6	96	82.00	-1.33	0.71	0.530491
9950	3R_DroMel_CAF1	26,664,048 – 26,664,156	- - - "knownCDS=Parent=FBtr0085708;Name=CG15544-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15544-RA" - - - - -	15857	26,664,048 – 26,664,156	+	6	111	78.00	-1.24	0.66	0.589230
9951	3R_DroMel_CAF1	26,668,216 – 26,668,314	- - - - - - - - -	15858	26,668,216 – 26,668,314	-	6	98	81.36	-2.37	0.67	0.864130
9952	3R_DroMel_CAF1	26,668,508 – 26,668,615	- - - - - - - - -	15859	26,668,508 – 26,668,615	-	6	114	79.32	-1.13	0.77	0.647411
9953	3R_DroMel_CAF1	26,670,650 – 26,670,758	- - - - - - - - -	15860	26,670,650 – 26,670,758	-	4	111	77.17	-2.03	0.58	0.813569
9954	3R_DroMel_CAF1	26,679,422 – 26,679,621	- - - "knownCDS=Parent=FBtr0085709;Name=tll-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1378-RA" - - - - -	15861	26,679,422 – 26,679,541	+	5	120	92.88	-1.43	0.91	0.921069
9954	3R_DroMel_CAF1	26,679,422 – 26,679,621		15862	26,679,501 – 26,679,621	+	5	120	95.25	-1.97	0.88	0.990497
9955	3R_DroMel_CAF1	26,680,808 – 26,680,959	- - - - - - - - -	15863	26,680,808 – 26,680,928	-	5	120	97.83	-2.32	0.91	0.997661
9955	3R_DroMel_CAF1	26,680,808 – 26,680,959	- - - - - - - - -	15864	26,680,848 – 26,680,959	-	5	120	94.59	-1.31	0.86	0.642909
9956	3R_DroMel_CAF1	26,681,146 – 26,681,266	- - - - - - - - -	15865	26,681,146 – 26,681,266	-	5	120	98.75	-2.11	0.91	0.990103
9957	3R_DroMel_CAF1	26,681,828 – 26,681,934	- - - - - - - - -	15866	26,681,828 – 26,681,934	+	5	120	87.10	-1.95	0.71	0.688955
9958	3R_DroMel_CAF1	26,682,223 – 26,682,375	- - - - - - - - -	15867	26,682,223 – 26,682,335	+	5	119	96.34	-1.42	0.90	0.850253
9958	3R_DroMel_CAF1	26,682,223 – 26,682,375	- - - - - - - - -	15868	26,682,260 – 26,682,375	+	5	119	95.37	-3.13	0.99	0.999992
9959	3R_DroMel_CAF1	26,682,513 – 26,682,815	- - - - - - - - -	15869	26,682,513 – 26,682,618	-	5	120	92.34	-1.13	0.92	0.591606
				15870	26,682,553 – 26,682,655	-	4	102	95.92	-1.45	0.94	0.557877
				15871	26,682,618 – 26,682,735	+	5	120	94.16	-1.61	0.89	0.959609
				15872	26,682,695 – 26,682,815	+	5	120	95.83	-1.50	0.82	0.584504
9960	3R_DroMel_CAF1	26,683,289 – 26,683,439	- - - - - - - - -	15873	26,683,289 – 26,683,401	-	5	120	96.88	-1.98	0.99	0.999096
9960	3R_DroMel_CAF1	26,683,289 – 26,683,439	- - - - - - - - -	15874	26,683,321 – 26,683,439	-	5	120	96.13	-1.70	0.83	0.799910
9961	3R_DroMel_CAF1	26,683,943 – 26,684,059	- - - - - - - - -	15875	26,683,943 – 26,684,059	-	5	120	95.08	-1.11	0.91	0.518453
9962	3R_DroMel_CAF1	26,684,536 – 26,684,644	- - - - - - - - -	15876	26,684,536 – 26,684,644	+	5	120	93.30	-2.01	0.85	0.983973
9963	3R_DroMel_CAF1	26,684,718 – 26,684,918	- - - - - - - - -	15877	26,684,718 – 26,684,838	+	5	120	94.67	-1.42	0.82	0.564586
				15878	26,684,718 – 26,684,838	-	5	120	94.67	-1.42	0.82	0.563121
				15879	26,684,758 – 26,684,878	+	5	120	96.50	-1.49	0.95	0.961274
				15880	26,684,798 – 26,684,918	+	5	120	96.00	-1.94	0.97	0.998895
9964	3R_DroMel_CAF1	26,685,301 – 26,685,421	- - - - - - - - -	15881	26,685,301 – 26,685,421	-	5	120	94.75	-1.35	0.89	0.805933
9965	3R_DroMel_CAF1	26,685,801 – 26,685,947	- - - - - - - - -	15882	26,685,801 – 26,685,907	+	5	120	92.67	-1.52	0.79	0.619558
9965	3R_DroMel_CAF1	26,685,801 – 26,685,947	- - - - - - - - -	15883	26,685,840 – 26,685,947	+	5	120	93.07	-1.47	0.85	0.806080
9966	3R_DroMel_CAF1	26,686,299 – 26,686,401	- - - - - - - - -	15884	26,686,299 – 26,686,401	+	5	120	91.23	-1.60	0.86	0.903867
9967	3R_DroMel_CAF1	26,686,639 – 26,686,799	- - - - - - - - -	15885	26,686,639 – 26,686,759	+	5	120	90.45	-1.89	0.79	0.872228
9967	3R_DroMel_CAF1	26,686,639 – 26,686,799	- - - - - - - - -	15886	26,686,679 – 26,686,799	+	5	120	98.33	-1.21	0.95	0.583923
9968	3R_DroMel_CAF1	26,687,361 – 26,687,628	- - - - - - - - -	15887	26,687,361 – 26,687,473	+	5	120	94.83	-1.33	0.92	0.877979
				15888	26,687,361 – 26,687,473	-	5	120	94.83	-1.73	0.97	0.996670
				15889	26,687,473 – 26,687,593	+	5	120	94.17	-1.66	0.83	0.869862
				15890	26,687,513 – 26,687,628	+	5	120	88.86	-2.74	0.65	0.627343
9969	3R_DroMel_CAF1	26,688,473 – 26,688,590	- - - - - - - - -	15891	26,688,473 – 26,688,590	+	5	120	94.33	-1.82	0.85	0.962041
9970	3R_DroMel_CAF1	26,688,630 – 26,688,724	- - - - - - - - -	15892	26,688,630 – 26,688,724	-	5	120	86.62	-1.97	0.77	0.851778
9971	3R_DroMel_CAF1	26,688,764 – 26,688,855	- - - - - - - - -	15893	26,688,764 – 26,688,855	+	4	91	97.25	-1.61	0.98	0.664835
9972	3R_DroMel_CAF1	26,689,800 – 26,689,918	- - - - - - - - -	15894	26,689,800 – 26,689,918	+	5	120	91.72	-1.21	0.96	0.790215
9973	3R_DroMel_CAF1	26,690,535 – 26,690,651	- - - - - - - - -	15895	26,690,535 – 26,690,651	+	5	120	84.20	-2.66	0.53	0.692885
9973	3R_DroMel_CAF1	26,690,535 – 26,690,651	- - - - - - - - -	15896	26,690,535 – 26,690,651	-	5	120	84.20	-1.99	0.59	0.505827
9974	3R_DroMel_CAF1	26,690,916 – 26,691,206	- - - - - - - - -	15897	26,690,916 – 26,691,015	-	5	120	84.22	-1.89	0.68	0.668634
				15898	26,691,015 – 26,691,135	+	5	120	92.46	-1.68	0.80	0.801465
				15899	26,691,095 – 26,691,206	+	5	120	92.46	-1.34	0.86	0.723365
9975	3R_DroMel_CAF1	26,692,132 – 26,692,270	- - - - - - - - -	15900	26,692,132 – 26,692,230	+	5	120	86.75	-1.78	0.74	0.698591
				15901	26,692,132 – 26,692,230	-	5	120	86.75	-1.67	0.80	0.725090
				15902	26,692,164 – 26,692,270	+	5	120	91.94	-3.06	0.76	0.980730
				15903	26,692,164 – 26,692,270	-	5	120	91.94	-1.51	0.82	0.736328
9976	3R_DroMel_CAF1	26,695,317 – 26,695,417	- - - - - - - - -	15904	26,695,317 – 26,695,417	-	4	100	92.05	-1.59	0.82	0.626780
9977	3R_DroMel_CAF1	26,695,897 – 26,696,013	- - - - - - - - -	15905	26,695,897 – 26,695,987	-	6	108	81.30	-1.68	0.72	0.742476
9977	3R_DroMel_CAF1	26,695,897 – 26,696,013	- - - - - - - - -	15906	26,695,923 – 26,696,013	-	6	107	82.34	-1.76	0.63	0.513604
9978	3R_DroMel_CAF1	26,698,279 – 26,698,375	- - - - - - - - -	15907	26,698,279 – 26,698,375	+	6	98	77.38	-1.56	0.56	0.500000
9979	3R_DroMel_CAF1	26,701,783 – 26,701,886	- - - "knownCDS=Parent=FBtr0085718;Name=CG15546-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15546-RA" - - - - -	15908	26,701,783 – 26,701,886	+	6	103	79.95	-1.38	0.64	0.530338
9980	3R_DroMel_CAF1	26,714,574 – 26,714,665	- - - "knownCDS=Parent=FBtr0085713;Name=Sap-r-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12070-RA" - - - - -	15909	26,714,574 – 26,714,665	+	6	103	73.55	-1.52	0.77	0.971211
9980	3R_DroMel_CAF1	26,714,574 – 26,714,665		15910	26,714,574 – 26,714,665	-	6	103	73.55	-1.35	0.61	0.686299
9981	3R_DroMel_CAF1	26,723,563 – 26,723,658	- - - "knownCDS=Parent=FBtr0085712;Name=Cyp4c3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1438-RA" - - - - -	15911	26,723,563 – 26,723,658	-	6	96	79.85	-1.13	0.83	0.626991
9982	3R_DroMel_CAF1	26,729,900 – 26,729,992	- - - - - - - - -	15912	26,729,900 – 26,729,992	-	5	97	86.60	-1.61	0.73	0.541182
9983	3R_DroMel_CAF1	26,730,151 – 26,730,265	- - - - - - - - -	15913	26,730,151 – 26,730,265	-	6	120	74.50	-1.51	0.64	0.867629
9984	3R_DroMel_CAF1	26,735,611 – 26,735,715	- - - - - - - - -	15914	26,735,611 – 26,735,715	+	5	104	95.19	-1.71	0.88	0.961376
9985	3R_DroMel_CAF1	26,737,609 – 26,737,707	- - - - - - - - -	15915	26,737,609 – 26,737,707	+	6	114	75.77	-1.50	0.65	0.846770
9986	3R_DroMel_CAF1	26,740,471 – 26,740,568	- - - - - - - - -	15916	26,740,471 – 26,740,568	+	6	105	81.36	-2.26	0.72	0.877676
9986	3R_DroMel_CAF1	26,740,471 – 26,740,568	- - - - - - - - -	15917	26,740,471 – 26,740,568	-	6	105	81.36	-1.99	0.79	0.871958
9987	3R_DroMel_CAF1	26,743,815 – 26,743,938	- - - - - - - - -	15918	26,743,815 – 26,743,915	-	6	117	78.38	-2.19	0.64	0.942432
9987	3R_DroMel_CAF1	26,743,815 – 26,743,938	- - - - - - - - -	15919	26,743,839 – 26,743,938	-	6	116	82.83	-2.41	0.62	0.651295
9988	3R_DroMel_CAF1	26,744,027 – 26,744,126	- - - - - - - - -	15920	26,744,027 – 26,744,126	+	6	101	74.95	-1.60	0.62	0.866074
9989	3R_DroMel_CAF1	26,758,769 – 26,758,862	- - - - - - - - -	15921	26,758,769 – 26,758,862	+	6	102	84.32	-2.49	0.84	0.921335
9990	3R_DroMel_CAF1	26,762,608 – 26,762,725	- - - "knownCDS=Parent=FBtr0085751;Name=CG15550-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15550-RA" - - - - -	15922	26,762,608 – 26,762,725	+	6	117	80.00	-1.19	0.68	0.514491
9990	3R_DroMel_CAF1	26,762,608 – 26,762,725		15923	26,762,608 – 26,762,725	-	6	117	80.00	-2.22	0.56	0.801173
9991	3R_DroMel_CAF1	26,764,078 – 26,764,181	- - - - - - - - -	15924	26,764,078 – 26,764,181	-	5	120	71.44	-1.75	0.24	0.693118
9992	3R_DroMel_CAF1	26,764,734 – 26,764,835	- - - - - - - - -	15925	26,764,734 – 26,764,835	+	5	115	85.31	-2.47	0.74	0.952888
9992	3R_DroMel_CAF1	26,764,734 – 26,764,835	- - - - - - - - -	15926	26,764,734 – 26,764,835	-	5	115	85.31	-2.12	0.74	0.870430
9993	3R_DroMel_CAF1	26,766,001 – 26,766,101	- - - - - - - - -	15927	26,766,001 – 26,766,101	+	6	118	76.74	-2.04	0.50	0.793292
9994	3R_DroMel_CAF1	26,767,343 – 26,767,491	- - - - - - - - -	15928	26,767,343 – 26,767,461	+	6	118	74.62	-1.40	0.60	0.648162
				15929	26,767,343 – 26,767,461	-	6	118	74.62	-1.30	0.60	0.518742
				15930	26,767,383 – 26,767,491	+	6	115	78.31	-1.48	0.62	0.613247
				15931	26,767,383 – 26,767,491	-	6	115	78.31	-1.87	0.65	0.900283
9995	3R_DroMel_CAF1	26,767,994 – 26,768,101	- - - - - - - - -	15932	26,767,994 – 26,768,101	-	6	119	77.21	-1.25	0.72	0.781370
9996	3R_DroMel_CAF1	26,770,073 – 26,770,199	- - - - - - - - -	15933	26,770,073 – 26,770,172	+	6	106	85.70	-2.92	0.71	0.631448
				15934	26,770,109 – 26,770,199	+	5	98	92.83	-2.14	0.87	0.995202
				15935	26,770,109 – 26,770,199	-	5	98	92.83	-2.35	0.80	0.978642
9997	3R_DroMel_CAF1	26,771,290 – 26,771,382	- - - - - - - - -	15936	26,771,290 – 26,771,382	-	5	114	73.58	-1.87	0.58	0.897834
9998	3R_DroMel_CAF1	26,772,187 – 26,772,304	- - - - - - - - -	15937	26,772,187 – 26,772,304	-	4	120	69.70	-2.27	0.41	0.698665
9999	3R_DroMel_CAF1	26,773,080 – 26,773,235	- - - - - - - - -	15938	26,773,080 – 26,773,195	+	5	120	84.10	-2.12	0.84	0.950501
				15939	26,773,115 – 26,773,235	+	5	120	93.25	-2.63	0.91	0.999846
				15940	26,773,115 – 26,773,235	-	5	120	93.25	-1.32	0.84	0.619024
10000	3R_DroMel_CAF1	26,774,374 – 26,774,475	- - - - - - - - -	15941	26,774,374 – 26,774,475	+	6	109	91.37	-1.40	0.91	0.828342
10000	3R_DroMel_CAF1	26,774,374 – 26,774,475	- - - - - - - - -	15942	26,774,374 – 26,774,475	-	6	109	91.37	-1.36	0.87	0.500000
10001	3R_DroMel_CAF1	26,777,255 – 26,777,347	- - - - - - - - -	15943	26,777,255 – 26,777,347	-	6	117	87.17	-1.39	0.89	0.601360
10002	3R_DroMel_CAF1	26,778,179 – 26,778,287	- - - - - - - - -	15944	26,778,179 – 26,778,287	-	5	114	82.43	-2.75	0.41	0.770568
10003	3R_DroMel_CAF1	26,778,392 – 26,778,493	- - - - - - - - -	15945	26,778,392 – 26,778,493	-	3	101	77.82	-1.90	0.72	0.945776
10004	3R_DroMel_CAF1	26,779,258 – 26,779,356	- - - - - - - - -	15946	26,779,258 – 26,779,356	-	6	120	79.40	-1.68	0.61	0.688494
10005	3R_DroMel_CAF1	26,779,855 – 26,779,952	- - - - - - - - -	15947	26,779,855 – 26,779,952	-	5	98	73.82	-2.40	0.32	0.991386
10006	3R_DroMel_CAF1	26,780,368 – 26,780,506	- - - - - - - - -	15948	26,780,368 – 26,780,474	+	5	117	80.48	-3.14	0.62	0.996118
				15949	26,780,368 – 26,780,474	-	5	117	80.48	-2.37	0.84	0.985070
				15950	26,780,397 – 26,780,506	-	6	115	83.24	-1.70	0.76	0.627464
10007	3R_DroMel_CAF1	26,786,732 – 26,786,822	- - - "knownCDS=Parent=FBtr0085731;Name=CG15548-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15548-RA" - - - - -	15951	26,786,732 – 26,786,822	-	6	120	66.73	-1.87	0.30	0.555118
10008	3R_DroMel_CAF1	26,787,043 – 26,787,311	- - - "knownCDS=Parent=FBtr0085731;Name=CG15548-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15548-RA" - - - - -	15952	26,787,043 – 26,787,155	-	6	112	77.08	-1.19	0.64	0.524207
				15953	26,787,080 – 26,787,193	-	6	113	75.99	-2.16	0.69	0.981008
				15954	26,787,193 – 26,787,311	+	6	118	90.28	-2.73	0.84	0.962059
10009	3R_DroMel_CAF1	26,787,505 – 26,787,625	- - - "knownCDS=Parent=FBtr0085731;Name=CG15548-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15548-RA" - - - - -	15955	26,787,505 – 26,787,625	-	6	120	79.33	-1.63	0.57	0.500000
10010	3R_DroMel_CAF1	26,793,438 – 26,793,533	- - - - - - - - -	15956	26,793,438 – 26,793,533	-	6	101	73.41	-2.48	0.44	0.983146
10011	3R_DroMel_CAF1	26,793,946 – 26,794,037	- - - - - - - - -	15957	26,793,946 – 26,794,037	-	6	95	83.19	-2.20	0.64	0.586970
10012	3R_DroMel_CAF1	26,797,924 – 26,798,022	- - - - - - - - -	15958	26,797,924 – 26,798,022	-	6	113	82.85	-2.72	0.67	0.801799
10013	3R_DroMel_CAF1	26,798,134 – 26,798,230	- - - - - - - - -	15959	26,798,134 – 26,798,230	+	5	96	84.89	-2.64	0.69	0.938672
10013	3R_DroMel_CAF1	26,798,134 – 26,798,230	- - - - - - - - -	15960	26,798,134 – 26,798,230	-	5	96	84.89	-2.01	0.75	0.846589
10014	3R_DroMel_CAF1	26,798,511 – 26,798,612	- - - - - - - - -	15961	26,798,511 – 26,798,612	-	6	106	79.69	-2.33	0.74	0.945476
10015	3R_DroMel_CAF1	26,803,533 – 26,803,626	- - - - - - - - -	15962	26,803,533 – 26,803,626	+	6	116	77.51	-1.56	0.67	0.852333
10016	3R_DroMel_CAF1	26,804,627 – 26,804,723	- - - - - - - - -	15963	26,804,627 – 26,804,723	+	5	98	90.60	-2.11	0.71	0.625696
10017	3R_DroMel_CAF1	26,804,806 – 26,804,901	- - - - - - - - -	15964	26,804,806 – 26,804,901	+	3	105	70.26	-1.51	0.61	0.869278
10018	3R_DroMel_CAF1	26,810,577 – 26,810,667	- - - - - - - - -	15965	26,810,577 – 26,810,667	+	6	109	79.72	-1.60	0.59	0.528519
10019	3R_DroMel_CAF1	26,811,500 – 26,811,618	- - - - - - - - -	15966	26,811,500 – 26,811,618	-	5	119	94.10	-1.76	0.81	0.834268
10020	3R_DroMel_CAF1	26,813,037 – 26,813,143	- - - - - - - - -	15967	26,813,037 – 26,813,143	+	5	117	72.71	-1.99	0.44	0.904286
10021	3R_DroMel_CAF1	26,813,219 – 26,813,337	- - - - - - - - -	15968	26,813,219 – 26,813,337	-	5	120	91.62	-2.73	0.73	0.896294
10022	3R_DroMel_CAF1	26,813,566 – 26,813,666	- - - - - - - - -	15969	26,813,566 – 26,813,666	+	4	100	79.17	-1.79	0.63	0.647087
10023	3R_DroMel_CAF1	26,814,492 – 26,814,583	- - - - - - - - -	15970	26,814,492 – 26,814,583	+	6	103	80.38	-2.83	0.44	0.768864
10023	3R_DroMel_CAF1	26,814,492 – 26,814,583	- - - - - - - - -	15971	26,814,492 – 26,814,583	-	6	103	80.38	-2.09	0.52	0.580549
10024	3R_DroMel_CAF1	26,815,443 – 26,815,551	- - - "knownCDS=Parent=FBtr0085748;Name=CG31008-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31008-RA" - - - - -	15972	26,815,443 – 26,815,551	-	6	109	79.75	-1.38	0.70	0.696330
10025	3R_DroMel_CAF1	26,818,394 – 26,818,497	- - - - - - - - -	15973	26,818,394 – 26,818,497	+	5	107	71.22	-1.64	0.16	0.595236
10026	3R_DroMel_CAF1	26,821,121 – 26,821,212	- - - - - - - - -	15974	26,821,121 – 26,821,212	-	6	110	75.72	-1.69	0.51	0.537845
10027	3R_DroMel_CAF1	26,829,629 – 26,829,730	- - - - - - - - -	15975	26,829,629 – 26,829,730	+	6	104	77.31	-1.62	0.61	0.764921
10028	3R_DroMel_CAF1	26,830,408 – 26,830,507	- - - - - - - - -	15976	26,830,408 – 26,830,507	+	6	102	78.40	-1.53	0.60	0.591848
10029	3R_DroMel_CAF1	26,835,642 – 26,835,753	- - - - - - - - -	15977	26,835,642 – 26,835,753	-	5	111	93.69	-1.50	0.85	0.826675
10030	3R_DroMel_CAF1	26,850,500 – 26,850,602	- - - - - - - - -	15978	26,850,500 – 26,850,602	+	5	106	74.40	-2.02	0.31	0.913582
10030	3R_DroMel_CAF1	26,850,500 – 26,850,602	- - - - - - - - -	15979	26,850,500 – 26,850,602	-	5	106	74.40	-1.64	0.21	0.660797
10031	3R_DroMel_CAF1	26,850,676 – 26,850,774	- - - - - - - - -	15980	26,850,676 – 26,850,774	-	5	100	95.85	-1.88	0.88	0.984706
10032	3R_DroMel_CAF1	26,859,587 – 26,859,679	- - - - - - - - -	15981	26,859,587 – 26,859,679	+	6	108	77.22	-1.59	0.55	0.529007
10033	3R_DroMel_CAF1	26,862,626 – 26,862,720	- - - - - - - - -	15982	26,862,626 – 26,862,720	+	6	99	74.53	-1.76	0.49	0.640438
10034	3R_DroMel_CAF1	26,872,152 – 26,872,247	- - - - - - - - -	15983	26,872,152 – 26,872,247	-	5	97	88.93	-1.59	0.77	0.639361
10035	3R_DroMel_CAF1	26,876,042 – 26,876,142	- - - - - - - - -	15984	26,876,042 – 26,876,142	-	4	111	89.49	-1.84	0.67	0.500000
10036	3R_DroMel_CAF1	26,880,922 – 26,881,018	- - - - - - - - -	15985	26,880,922 – 26,881,018	-	3	96	97.91	-1.57	0.97	0.627982
10037	3R_DroMel_CAF1	26,886,571 – 26,886,753	- - - - - - - - -	15986	26,886,571 – 26,886,661	-	6	108	76.11	-2.29	0.64	0.981894
10037	3R_DroMel_CAF1	26,886,571 – 26,886,753	- - - - - - - - -	15987	26,886,661 – 26,886,753	-	5	93	90.32	-2.06	0.80	0.941839
10038	3R_DroMel_CAF1	26,887,188 – 26,887,304	- - - - - - - - -	15988	26,887,188 – 26,887,304	+	5	120	65.04	-1.95	0.42	0.854304
10038	3R_DroMel_CAF1	26,887,188 – 26,887,304	- - - - - - - - -	15989	26,887,188 – 26,887,304	-	5	120	65.04	-1.69	0.57	0.901685
10039	3R_DroMel_CAF1	26,887,583 – 26,887,702	- - - - - - - - -	15990	26,887,583 – 26,887,702	-	5	120	94.82	-2.00	0.85	0.981158
10040	3R_DroMel_CAF1	26,888,015 – 26,888,126	- - - - - - - - -	15991	26,888,015 – 26,888,126	+	5	114	74.46	-1.85	0.38	0.713567
10041	3R_DroMel_CAF1	26,888,279 – 26,888,399	- - - - - - - - -	15992	26,888,279 – 26,888,399	-	5	120	91.67	-1.66	0.80	0.796139
10042	3R_DroMel_CAF1	26,894,978 – 26,895,083	- - - - - - - - -	15993	26,894,978 – 26,895,083	+	5	119	84.36	-1.55	0.79	0.579119
10042	3R_DroMel_CAF1	26,894,978 – 26,895,083	- - - - - - - - -	15994	26,894,978 – 26,895,083	-	5	119	84.36	-1.85	0.62	0.517851
10043	3R_DroMel_CAF1	26,899,829 – 26,899,941	- - - - - - - - -	15995	26,899,829 – 26,899,941	+	5	120	89.49	-3.22	0.67	0.854131
10044	3R_DroMel_CAF1	26,908,468 – 26,908,558	- - - "knownCDS=Parent=FBtr0085735;Name=Sox100B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15552-RA" - - - - -	15996	26,908,468 – 26,908,558	+	6	111	81.04	-1.60	0.65	0.623245
10045	3R_DroMel_CAF1	26,914,632 – 26,914,766	- - - - - - - - -	15997	26,914,632 – 26,914,729	-	6	106	76.07	-1.70	0.52	0.575004
				15998	26,914,670 – 26,914,766	+	6	104	92.91	-1.43	0.89	0.801789
				15999	26,914,670 – 26,914,766	-	6	104	92.91	-1.67	0.90	0.939845
10046	3R_DroMel_CAF1	26,920,631 – 26,920,736	- - - - - - - - -	16000	26,920,631 – 26,920,736	+	6	110	76.06	-1.81	0.48	0.551667
10047	3R_DroMel_CAF1	26,921,112 – 26,921,210	- - - - - - - - -	16001	26,921,112 – 26,921,210	+	5	98	90.71	-1.96	0.86	0.984381
10047	3R_DroMel_CAF1	26,921,112 – 26,921,210	- - - - - - - - -	16002	26,921,112 – 26,921,210	-	5	98	90.71	-1.60	0.84	0.854251
10048	3R_DroMel_CAF1	26,924,273 – 26,924,363	- - - - - - - - -	16003	26,924,273 – 26,924,363	+	3	90	99.26	-1.68	0.94	0.604048
10048	3R_DroMel_CAF1	26,924,273 – 26,924,363	- - - - - - - - -	16004	26,924,273 – 26,924,363	-	3	90	99.26	-2.63	1.01	0.982409
10049	3R_DroMel_CAF1	26,929,108 – 26,929,265	- - - - - - - - -	16005	26,929,108 – 26,929,207	+	6	113	81.95	-3.29	0.65	0.925921
				16006	26,929,108 – 26,929,207	-	6	113	81.95	-2.77	0.60	0.830059
				16007	26,929,174 – 26,929,265	+	6	109	82.04	-2.09	0.68	0.758109
				16008	26,929,174 – 26,929,265	-	6	109	82.04	-2.29	0.58	0.649121
10050	3R_DroMel_CAF1	26,929,535 – 26,929,638	- - - - - - - - -	16009	26,929,535 – 26,929,638	+	6	118	79.11	-2.22	0.46	0.599970
10051	3R_DroMel_CAF1	26,933,708 – 26,933,828	- - - "knownCDS=Parent=FBtr0085739;Name=CG11318-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11318-RA" - - - - -	16010	26,933,708 – 26,933,828	-	6	120	83.83	-1.89	0.69	0.529117
10052	3R_DroMel_CAF1	26,936,085 – 26,936,176	- - - - - - - - -	16011	26,936,085 – 26,936,176	+	6	108	71.56	-1.95	0.52	0.945579
10053	3R_DroMel_CAF1	26,936,910 – 26,937,008	- - - - - - - - -	16012	26,936,910 – 26,937,008	+	6	99	89.55	-1.93	0.83	0.679859
10054	3R_DroMel_CAF1	26,945,701 – 26,945,820	- - - - - - - - -	16013	26,945,701 – 26,945,820	-	5	120	92.22	-2.57	0.82	0.993748
10055	3R_DroMel_CAF1	26,947,572 – 26,947,666	- - - - - - - - -	16014	26,947,572 – 26,947,666	+	6	120	81.46	-1.77	0.60	0.537469
10056	3R_DroMel_CAF1	26,948,417 – 26,948,617	- - - "knownCDS=Parent=FBtr0085738;Name=Prosalpha3T-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1736-RA" - - - - -	16015	26,948,417 – 26,948,537	+	5	120	86.67	-2.10	0.73	0.839661
				16016	26,948,457 – 26,948,577	+	5	120	89.58	-2.89	0.77	0.989775
				16017	26,948,457 – 26,948,577	-	5	120	89.58	-1.95	0.81	0.933572
				16018	26,948,497 – 26,948,617	+	5	120	91.92	-2.09	0.80	0.955127
				16019	26,948,497 – 26,948,617	-	5	120	91.92	-1.54	0.80	0.695707
10057	3R_DroMel_CAF1	26,948,817 – 26,948,937	- - - "knownCDS=Parent=FBtr0085738;Name=Prosalpha3T-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1736-RA" - - - - -	16020	26,948,817 – 26,948,937	+	5	120	84.58	-1.48	0.78	0.500000
10058	3R_DroMel_CAF1	26,949,406 – 26,949,510	- - - - - - - - -	16021	26,949,406 – 26,949,510	+	6	120	85.61	-2.03	0.77	0.581331
10059	3R_DroMel_CAF1	26,949,999 – 26,950,089	- - - - - - - - -	16022	26,949,999 – 26,950,089	+	6	120	83.75	-1.61	0.77	0.554530
10060	3R_DroMel_CAF1	26,951,064 – 26,951,166	- - - - - - - - -	16023	26,951,064 – 26,951,166	+	6	120	81.84	-1.57	0.70	0.636463
10060	3R_DroMel_CAF1	26,951,064 – 26,951,166	- - - - - - - - -	16024	26,951,064 – 26,951,166	-	6	120	81.84	-1.86	0.61	0.561309
10061	3R_DroMel_CAF1	26,951,577 – 26,951,685	- - - - - - - - -	16025	26,951,577 – 26,951,673	+	4	120	76.35	-2.01	0.60	0.873966
10061	3R_DroMel_CAF1	26,951,577 – 26,951,685	- - - - - - - - -	16026	26,951,594 – 26,951,685	+	5	120	70.66	-2.34	0.42	0.990804
10062	3R_DroMel_CAF1	26,952,526 – 26,952,621	- - - "knownCDS=Parent=FBtr0085736;Name=CG15554-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15554-RA" - - - - -	16027	26,952,526 – 26,952,621	+	6	95	84.98	-1.54	0.81	0.500000
10063	3R_DroMel_CAF1	26,958,885 – 26,958,980	- - - - - - - - -	16028	26,958,885 – 26,958,980	-	6	115	72.73	-2.12	0.54	0.973076
10064	3R_DroMel_CAF1	26,959,552 – 26,959,682	- - - - - - - - -	16029	26,959,552 – 26,959,648	+	6	110	80.79	-2.23	0.55	0.691706
10064	3R_DroMel_CAF1	26,959,552 – 26,959,682	- - - - - - - - -	16030	26,959,588 – 26,959,682	+	6	103	77.73	-2.39	0.52	0.934978
10065	3R_DroMel_CAF1	26,960,602 – 26,960,700	- - - - - - - - -	16031	26,960,602 – 26,960,700	-	6	120	78.07	-1.22	0.71	0.711347
10066	3R_DroMel_CAF1	26,960,759 – 26,960,851	- - - - - - - - -	16032	26,960,759 – 26,960,851	-	5	95	76.36	-1.26	0.71	0.561419
10067	3R_DroMel_CAF1	26,961,106 – 26,961,197	- - - - - - - - -	16033	26,961,106 – 26,961,197	+	6	110	78.84	-0.94	0.82	0.572269
10068	3R_DroMel_CAF1	26,962,561 – 26,962,652	- - - - - - - - -	16034	26,962,561 – 26,962,652	-	6	102	79.12	-2.24	0.51	0.784900
10069	3R_DroMel_CAF1	26,964,531 – 26,964,630	- - - - - - - - -	16035	26,964,531 – 26,964,630	+	6	103	77.41	-1.53	0.58	0.566670
10069	3R_DroMel_CAF1	26,964,531 – 26,964,630	- - - - - - - - -	16036	26,964,531 – 26,964,630	-	6	103	77.41	-1.89	0.64	0.922233
10070	3R_DroMel_CAF1	26,965,699 – 26,965,796	- - - - - - - - -	16037	26,965,699 – 26,965,796	-	5	105	93.41	-1.51	0.94	0.975752
10071	3R_DroMel_CAF1	26,978,632 – 26,978,750	- - "RNAmicro=f:26978632_t:26978751_strand:+_p:0.964850" - - - - - -	16038	26,978,632 – 26,978,750	+	3	120	62.29	-2.85	0.45	0.998885
10071	3R_DroMel_CAF1	26,978,632 – 26,978,750		16039	26,978,632 – 26,978,750	-	3	120	62.29	-3.72	0.62	1.000000
10072	3R_DroMel_CAF1	26,981,179 – 26,981,282	- - - - - - - - -	16040	26,981,179 – 26,981,282	+	6	111	75.74	-2.98	0.48	0.994473
10073	3R_DroMel_CAF1	26,983,085 – 26,983,237	- - - - - - - - -	16041	26,983,085 – 26,983,198	-	5	118	90.88	-2.93	0.78	0.990821
10073	3R_DroMel_CAF1	26,983,085 – 26,983,237	- - - - - - - - -	16042	26,983,125 – 26,983,237	-	5	118	79.76	-2.19	0.52	0.829380
10074	3R_DroMel_CAF1	26,984,190 – 26,984,332	- - - "knownCDS=Parent=FBtr0085781, FBtr0085782;Name=CG31006-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31006-RB, FlyBase+Annotation+IDs:CG31006-RA" - - - - -	16043	26,984,190 – 26,984,292	+	6	102	75.56	-2.34	0.47	0.946507
10074	3R_DroMel_CAF1	26,984,190 – 26,984,332		16044	26,984,215 – 26,984,332	+	6	120	76.16	-2.59	0.50	0.980256
10075	3R_DroMel_CAF1	26,984,490 – 26,984,597	- - - "knownCDS=Parent=FBtr0085781, FBtr0085782;Name=CG31006-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31006-RB, FlyBase+Annotation+IDs:CG31006-RA" - - - - -	16045	26,984,490 – 26,984,597	+	6	112	81.44	-1.95	0.61	0.645566
10076	3R_DroMel_CAF1	26,993,212 – 26,993,358	- - - - - - - - -	16046	26,993,212 – 26,993,318	+	5	106	92.64	-1.87	0.92	0.996212
				16047	26,993,212 – 26,993,318	-	5	106	92.64	-1.35	0.85	0.684560
				16048	26,993,242 – 26,993,358	-	5	116	85.53	-1.96	0.82	0.908482
10077	3R_DroMel_CAF1	26,993,730 – 26,993,844	- - - "knownCDS=Parent=FBtr0085781;Name=CG31006-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31006-RB" - - - - -	16049	26,993,730 – 26,993,844	+	6	117	79.06	-2.27	0.62	0.928743
10078	3R_DroMel_CAF1	26,998,071 – 26,998,166	- - - - - - - - -	16050	26,998,071 – 26,998,166	-	6	115	73.33	-1.80	0.54	0.867398
10079	3R_DroMel_CAF1	26,998,450 – 26,998,557	- - - - - - - - -	16051	26,998,450 – 26,998,557	+	6	119	81.05	-2.72	0.49	0.749213
10080	3R_DroMel_CAF1	26,999,476 – 26,999,566	- - - - - - - - -	16052	26,999,476 – 26,999,566	+	6	100	83.10	-1.75	0.66	0.505332
10081	3R_DroMel_CAF1	27,008,031 – 27,008,151	- - - "knownCDS=Parent=FBtr0085779;Name=CG31004-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31004-RA" - - - - -	16053	27,008,031 – 27,008,151	+	6	120	87.94	-2.03	0.80	0.571824
10082	3R_DroMel_CAF1	27,008,431 – 27,008,524	- - - - - - - - -	16054	27,008,431 – 27,008,524	+	6	97	81.64	-1.33	0.80	0.610894
10083	3R_DroMel_CAF1	27,010,466 – 27,010,571	- - - - - - - - -	16055	27,010,466 – 27,010,571	-	6	116	74.23	-1.02	0.81	0.897821
10084	3R_DroMel_CAF1	27,012,074 – 27,012,172	- - - - - - - - -	16056	27,012,074 – 27,012,172	+	6	106	87.99	-5.25	0.87	0.998071
10084	3R_DroMel_CAF1	27,012,074 – 27,012,172	- - - - - - - - -	16057	27,012,074 – 27,012,172	-	6	106	87.99	-3.20	0.74	0.689312
10085	3R_DroMel_CAF1	27,014,271 – 27,014,365	- - - - - - - - -	16058	27,014,271 – 27,014,365	+	5	110	87.09	-2.62	0.82	0.993218
10085	3R_DroMel_CAF1	27,014,271 – 27,014,365	- - - - - - - - -	16059	27,014,271 – 27,014,365	-	5	110	87.09	-1.75	0.79	0.778822
10086	3R_DroMel_CAF1	27,019,616 – 27,019,730	- - - "knownCDS=Parent=FBtr0085754;Name=bnk-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1480-RA" - - - - -	16060	27,019,616 – 27,019,730	-	6	114	84.85	-1.73	0.76	0.507506
10087	3R_DroMel_CAF1	27,024,290 – 27,024,382	- - - - - - - - -	16061	27,024,290 – 27,024,382	+	6	101	84.03	-3.18	0.56	0.591714
10088	3R_DroMel_CAF1	27,033,220 – 27,033,310	- - - "knownCDS=Parent=FBtr0085778;Name=chp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1744-RA" - - - - -	16062	27,033,220 – 27,033,310	+	6	95	83.03	-1.56	0.77	0.600488
10089	3R_DroMel_CAF1	27,041,004 – 27,041,099	- - - "knownCDS=Parent=FBtr0085776;Name=CG15561-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15561-RA" - - - - -	16063	27,041,004 – 27,041,099	+	6	106	77.96	-1.76	0.53	0.559796
10090	3R_DroMel_CAF1	27,043,182 – 27,043,281	"known=RNase_P_RNA ID=Dmel\CG_RFAM_INF_49002396;Rfam ID=RNaseP_nuc;Rfam_accession=RF00009;" - - - "Rfam=AC008221.5/55045-54770_RF00009;RNaseP_nuc;\|6e-51" "Noncode=n404,u376,AE003777,rnpB,Drosophila_melanogaster_(fruit_fly)\|8e-52" - - "Flybase=FBgn0046696:Ribonuclease_P_RNA:nuclear_untranslated_RNA_gene\|8e-53"	16064	27,043,182 – 27,043,281	-	6	106	79.22	-1.36	0.66	0.620763
10091	3R_DroMel_CAF1	27,043,286 – 27,043,403	"known=RNase_P_RNA ID=Dmel\CG_RFAM_INF_49002396;Rfam ID=RNaseP_nuc;Rfam_accession=RF00009;" - - - "Rfam=AC008221.5/55045-54770_RF00009;RNaseP_nuc;\|2e-42" "Noncode=n404,u376,AE003777,rnpB,Drosophila_melanogaster_(fruit_fly)\|4e-51" - - "Flybase=FBgn0046696:Ribonuclease_P_RNA:nuclear_untranslated_RNA_gene\|4e-52"	16065	27,043,286 – 27,043,377	-	6	106	77.89	-1.55	0.81	0.913842
10091	3R_DroMel_CAF1	27,043,286 – 27,043,403		16066	27,043,298 – 27,043,403	-	6	107	81.48	-2.16	0.78	0.887777
10092	3R_DroMel_CAF1	27,043,437 – 27,043,649	- - - "knownCDS=Parent=FBtr0085772, FBtr0085773, FBtr0085774;Name=CG1746-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1746-RA, FlyBase+Annotation+IDs:CG1746-RC, FlyBase+Annotation+IDs:CG1746-RB" - - - - -	16067	27,043,437 – 27,043,529	-	6	101	85.97	-1.51	0.88	0.656153
				16068	27,043,489 – 27,043,609	-	6	120	95.00	-1.04	0.96	0.888795
				16069	27,043,529 – 27,043,649	+	6	120	95.61	-1.32	0.87	0.551754
				16070	27,043,529 – 27,043,649	-	6	120	95.61	-1.30	0.88	0.605716
10093	3R_DroMel_CAF1	27,044,640 – 27,044,740	- - - "knownCDS=Parent=FBtr0085772, FBtr0085773;Name=CG1746-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1746-RA, FlyBase+Annotation+IDs:CG1746-RC" - - - - -	16071	27,044,640 – 27,044,740	+	6	114	78.23	-1.35	0.65	0.644679
10094	3R_DroMel_CAF1	27,051,835 – 27,051,935	- - - "knownCDS=Parent=FBtr0085758;Name=CG12054-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12054-RA" - - - - -	16072	27,051,835 – 27,051,935	-	6	107	74.19	-1.43	0.56	0.528580
10095	3R_DroMel_CAF1	27,052,887 – 27,052,986	- - - "knownCDS=Parent=FBtr0085758;Name=CG12054-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12054-RA" - - - - -	16073	27,052,887 – 27,052,986	+	6	114	78.46	-3.25	0.58	0.989325
10095	3R_DroMel_CAF1	27,052,887 – 27,052,986		16074	27,052,887 – 27,052,986	-	6	114	78.46	-3.59	0.74	0.980544
10096	3R_DroMel_CAF1	27,053,056 – 27,053,147	- - - "knownCDS=Parent=FBtr0085758;Name=CG12054-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12054-RA" - - - - -	16075	27,053,056 – 27,053,147	-	6	99	88.83	-2.98	0.94	0.999423
10097	3R_DroMel_CAF1	27,054,352 – 27,054,445	- - - - - - - - -	16076	27,054,352 – 27,054,445	-	4	96	97.19	-2.34	1.00	0.967592
10098	3R_DroMel_CAF1	27,055,345 – 27,055,543	- - - - - - - - -	16077	27,055,345 – 27,055,463	+	5	118	98.14	-2.29	0.96	0.999104
10098	3R_DroMel_CAF1	27,055,345 – 27,055,543	- - - - - - - - -	16078	27,055,423 – 27,055,543	+	5	120	94.75	-2.68	0.89	0.999629
10099	3R_DroMel_CAF1	27,056,372 – 27,056,463	- - - - - - - - -	16079	27,056,372 – 27,056,463	+	5	102	85.12	-1.82	0.73	0.711614
10100	3R_DroMel_CAF1	27,057,335 – 27,057,551	- - - - - - - - -	16080	27,057,335 – 27,057,452	-	5	120	85.44	-2.00	0.76	0.845657
				16081	27,057,375 – 27,057,492	-	5	120	90.85	-2.27	0.85	0.994326
				16082	27,057,452 – 27,057,551	-	5	120	78.04	-2.18	0.54	0.916804
10101	3R_DroMel_CAF1	27,058,400 – 27,058,513	- - - "knownCDS=Parent=FBtr0085770;Name=CG15564-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15564-RA" - - - - -	16083	27,058,400 – 27,058,513	+	6	117	77.85	-1.24	0.69	0.691828
10102	3R_DroMel_CAF1	27,073,389 – 27,073,504	- - - - - - - - -	16084	27,073,389 – 27,073,504	+	5	120	85.34	-2.31	0.66	0.790026
10103	3R_DroMel_CAF1	27,078,346 – 27,078,453	- - - - - - - - -	16085	27,078,346 – 27,078,453	+	5	107	89.81	-2.08	0.73	0.746324
10104	3R_DroMel_CAF1	27,079,984 – 27,080,092	- - - - - - - - -	16086	27,079,984 – 27,080,092	-	6	108	81.30	-3.25	0.68	0.946880
10105	3R_DroMel_CAF1	27,086,876 – 27,086,993	- - - "knownCDS=Parent=FBtr0085762;Name=CG18672-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18672-RA" - - - - -	16087	27,086,876 – 27,086,993	+	5	120	73.43	-1.85	0.38	0.748012
10106	3R_DroMel_CAF1	27,087,030 – 27,087,149	- - - "knownCDS=Parent=FBtr0085762;Name=CG18672-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18672-RA" - - - - -	16088	27,087,030 – 27,087,149	+	5	120	70.10	-1.68	0.51	0.715905
10107	3R_DroMel_CAF1	27,087,703 – 27,087,800	- - - - - - - - -	16089	27,087,703 – 27,087,800	-	5	101	84.25	-2.22	0.74	0.917417
10108	3R_DroMel_CAF1	27,088,749 – 27,088,851	- - - - - - - - -	16090	27,088,749 – 27,088,851	+	6	105	80.69	-1.74	0.73	0.813332
10108	3R_DroMel_CAF1	27,088,749 – 27,088,851	- - - - - - - - -	16091	27,088,749 – 27,088,851	-	6	105	80.69	-1.22	0.68	0.500000
10109	3R_DroMel_CAF1	27,090,181 – 27,090,273	- - - - - - - - -	16092	27,090,181 – 27,090,273	-	6	109	77.47	-1.78	0.53	0.615712
10110	3R_DroMel_CAF1	27,091,493 – 27,091,583	- - - "knownCDS=Parent=FBtr0085764;Name=CG15555-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15555-RA" - - - - -	16093	27,091,493 – 27,091,583	+	6	99	71.03	-1.68	0.54	0.857507
10111	3R_DroMel_CAF1	27,104,025 – 27,104,124	- - - - - - - - -	16094	27,104,025 – 27,104,124	-	6	119	75.65	-2.36	0.33	0.656375
10112	3R_DroMel_CAF1	27,115,173 – 27,115,270	- - - - - - - - -	16095	27,115,173 – 27,115,270	-	6	113	78.84	-1.41	0.61	0.500000
10113	3R_DroMel_CAF1	27,116,173 – 27,116,268	- - - - - - - - -	16096	27,116,173 – 27,116,268	-	4	104	81.41	-1.66	0.68	0.617642
10114	3R_DroMel_CAF1	27,118,808 – 27,118,901	- - - - - - - - -	16097	27,118,808 – 27,118,901	+	4	95	63.59	-1.86	0.44	0.769130
10114	3R_DroMel_CAF1	27,118,808 – 27,118,901	- - - - - - - - -	16098	27,118,808 – 27,118,901	-	4	95	63.59	-2.43	0.41	0.931738
10115	3R_DroMel_CAF1	27,121,503 – 27,121,603	- - - - - - - - -	16099	27,121,503 – 27,121,603	+	5	108	70.29	-2.01	0.44	0.931867
10115	3R_DroMel_CAF1	27,121,503 – 27,121,603	- - - - - - - - -	16100	27,121,503 – 27,121,603	-	5	108	70.29	-1.84	0.28	0.729995
10116	3R_DroMel_CAF1	27,122,900 – 27,123,004	- - - - - - - - -	16101	27,122,900 – 27,123,004	-	3	104	78.71	-1.71	0.66	0.706585
10117	3R_DroMel_CAF1	27,126,074 – 27,126,168	- - - - - - - - -	16102	27,126,074 – 27,126,168	+	5	103	91.39	-1.47	0.84	0.758838
10118	3R_DroMel_CAF1	27,130,902 – 27,131,006	- - - - - - - - -	16103	27,130,902 – 27,131,006	+	6	117	78.92	-1.62	0.70	0.843605
10118	3R_DroMel_CAF1	27,130,902 – 27,131,006	- - - - - - - - -	16104	27,130,902 – 27,131,006	-	6	117	78.92	-1.41	0.76	0.821755
10119	3R_DroMel_CAF1	27,131,515 – 27,131,609	- - - - - - - - -	16105	27,131,515 – 27,131,609	+	4	107	83.99	-2.16	0.79	0.937599
10120	3R_DroMel_CAF1	27,140,302 – 27,140,501	- - - - - - - - -	16106	27,140,302 – 27,140,403	-	5	106	74.98	-1.60	0.20	0.617379
				16107	27,140,403 – 27,140,501	+	3	114	78.64	-1.83	0.80	0.946749
				16108	27,140,403 – 27,140,501	-	3	114	78.64	-1.92	0.66	0.867172
10121	3R_DroMel_CAF1	27,146,089 – 27,146,181	- - - - - - - - -	16109	27,146,089 – 27,146,181	+	5	100	78.53	-2.49	0.45	0.960911
10121	3R_DroMel_CAF1	27,146,089 – 27,146,181	- - - - - - - - -	16110	27,146,089 – 27,146,181	-	5	100	78.53	-2.24	0.36	0.861098
10122	3R_DroMel_CAF1	27,148,903 – 27,149,035	- - - - - - - - -	16111	27,148,903 – 27,149,020	-	6	117	79.04	-2.02	0.61	0.865915
				16112	27,148,942 – 27,149,035	+	6	93	89.39	-2.90	0.83	0.955278
				16113	27,148,942 – 27,149,035	-	6	93	89.39	-3.16	0.83	0.969805
10123	3R_DroMel_CAF1	27,149,838 – 27,149,970	- - - - - - - - -	16114	27,149,838 – 27,149,931	+	5	100	78.50	-2.41	0.58	0.973236
10123	3R_DroMel_CAF1	27,149,838 – 27,149,970	- - - - - - - - -	16115	27,149,851 – 27,149,970	+	5	120	74.92	-2.16	0.48	0.951875
10124	3R_DroMel_CAF1	27,150,644 – 27,150,734	- - - - - - - - -	16116	27,150,644 – 27,150,734	+	6	106	79.50	-1.29	0.71	0.665637
10125	3R_DroMel_CAF1	27,153,416 – 27,153,511	- - - - - - - - -	16117	27,153,416 – 27,153,511	-	5	113	77.91	-1.59	0.67	0.670755
10126	3R_DroMel_CAF1	27,154,466 – 27,154,571	- - - - - - - - -	16118	27,154,466 – 27,154,571	-	6	120	91.97	-1.71	0.84	0.592639
10127	3R_DroMel_CAF1	27,161,718 – 27,161,808	- - - - - - - - -	16119	27,161,718 – 27,161,808	+	6	112	80.37	-2.08	0.64	0.844511
10127	3R_DroMel_CAF1	27,161,718 – 27,161,808	- - - - - - - - -	16120	27,161,718 – 27,161,808	-	6	112	80.37	-1.24	0.69	0.557233
10128	3R_DroMel_CAF1	27,162,017 – 27,162,131	- - - - - - - - -	16121	27,162,017 – 27,162,131	-	4	114	82.02	-1.81	0.67	0.715719
10129	3R_DroMel_CAF1	27,173,534 – 27,173,669	- - - - - - - - -	16122	27,173,534 – 27,173,629	-	4	101	92.54	-1.37	0.86	0.500000
				16123	27,173,569 – 27,173,669	+	5	108	87.05	-2.52	0.65	0.746640
				16124	27,173,569 – 27,173,669	-	5	108	87.05	-3.42	0.66	0.950086
10130	3R_DroMel_CAF1	27,175,633 – 27,175,859	- - - - - - - - -	16125	27,175,633 – 27,175,753	+	5	120	72.70	-1.69	0.52	0.628538
10130	3R_DroMel_CAF1	27,175,633 – 27,175,859	- - - - - - - - -	16126	27,175,753 – 27,175,859	+	5	109	77.06	-2.32	0.15	0.969334
10131	3R_DroMel_CAF1	27,179,502 – 27,179,602	- - - - - - - - -	16127	27,179,502 – 27,179,602	+	6	107	82.96	-1.58	0.71	0.542267
10132	3R_DroMel_CAF1	27,180,927 – 27,181,022	- - - - - - - - -	16128	27,180,927 – 27,181,022	+	6	109	78.93	-1.77	0.64	0.828005
10132	3R_DroMel_CAF1	27,180,927 – 27,181,022	- - - - - - - - -	16129	27,180,927 – 27,181,022	-	6	109	78.93	-1.68	0.55	0.500000
10133	3R_DroMel_CAF1	27,182,225 – 27,182,332	- - - - - - - - -	16130	27,182,225 – 27,182,332	-	4	113	79.24	-2.00	0.74	0.934390
10134	3R_DroMel_CAF1	27,186,550 – 27,186,680	- - - "knownCDS=Parent=FBtr0085765;Name=CG11339-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11339-RA" - - - - -	16131	27,186,550 – 27,186,640	+	6	91	80.73	-2.07	0.66	0.835813
10134	3R_DroMel_CAF1	27,186,550 – 27,186,680		16132	27,186,572 – 27,186,680	-	6	120	76.05	-1.67	0.60	0.829761
10135	3R_DroMel_CAF1	27,190,384 – 27,190,486	- - - - - - - - -	16133	27,190,384 – 27,190,486	+	6	110	92.23	-2.68	0.89	0.996641
10135	3R_DroMel_CAF1	27,190,384 – 27,190,486	- - - - - - - - -	16134	27,190,384 – 27,190,486	-	6	110	92.23	-1.81	0.84	0.652902
10136	3R_DroMel_CAF1	27,194,648 – 27,194,739	- - - - - - - - -	16135	27,194,648 – 27,194,739	+	4	95	88.75	-1.45	0.93	0.737859
10137	3R_DroMel_CAF1	27,200,504 – 27,200,598	- - - - - - - - -	16136	27,200,504 – 27,200,598	+	6	96	78.81	-2.10	0.49	0.624536
10137	3R_DroMel_CAF1	27,200,504 – 27,200,598	- - - - - - - - -	16137	27,200,504 – 27,200,598	-	6	96	78.81	-1.04	0.78	0.637692
10138	3R_DroMel_CAF1	27,204,651 – 27,204,742	- - - - - - - - -	16138	27,204,651 – 27,204,742	-	6	105	82.98	-2.48	0.64	0.702694
10139	3R_DroMel_CAF1	27,216,648 – 27,216,750	- - - - - - - - -	16139	27,216,648 – 27,216,750	+	6	116	75.82	-2.29	0.32	0.518337
10140	3R_DroMel_CAF1	27,217,638 – 27,217,743	- - - - - - - - -	16140	27,217,638 – 27,217,743	+	6	115	77.28	-1.76	0.56	0.722179
10140	3R_DroMel_CAF1	27,217,638 – 27,217,743	- - - - - - - - -	16141	27,217,638 – 27,217,743	-	6	115	77.28	-1.49	0.65	0.781023
10141	3R_DroMel_CAF1	27,219,869 – 27,219,989	- - - "knownCDS=Parent=FBtr0085813;Name=CG31002-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31002-RA" - - - - -	16142	27,219,869 – 27,219,989	+	5	120	89.75	-1.52	0.84	0.784779
10142	3R_DroMel_CAF1	27,224,476 – 27,224,576	- - - "knownCDS=Parent=FBtr0085787;Name=Gcn2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1609-RA" - - - - -	16143	27,224,476 – 27,224,576	-	6	107	75.80	-1.94	0.46	0.651752
10143	3R_DroMel_CAF1	27,228,331 – 27,228,438	- - - - - - - - -	16144	27,228,331 – 27,228,438	-	6	110	81.60	-1.55	0.64	0.526650
10144	3R_DroMel_CAF1	27,234,333 – 27,234,423	- - - - - - - - -	16145	27,234,333 – 27,234,423	-	6	95	75.05	-2.69	0.27	0.831345
10145	3R_DroMel_CAF1	27,245,388 – 27,245,491	- - - - - - - - -	16146	27,245,388 – 27,245,491	+	6	107	72.51	-1.92	0.56	0.950533
10145	3R_DroMel_CAF1	27,245,388 – 27,245,491	- - - - - - - - -	16147	27,245,388 – 27,245,491	-	6	107	72.51	-2.35	0.48	0.983879
10146	3R_DroMel_CAF1	27,247,736 – 27,247,827	- - - - - - - - -	16148	27,247,736 – 27,247,827	-	6	93	72.86	-1.95	0.57	0.958654
10147	3R_DroMel_CAF1	27,247,848 – 27,247,943	- - - - - - - - -	16149	27,247,848 – 27,247,943	-	6	107	75.82	-1.55	0.60	0.735716
10148	3R_DroMel_CAF1	27,248,610 – 27,248,707	- - - - - - - - -	16150	27,248,610 – 27,248,707	+	6	115	72.52	-2.27	0.47	0.973000
10148	3R_DroMel_CAF1	27,248,610 – 27,248,707	- - - - - - - - -	16151	27,248,610 – 27,248,707	-	6	115	72.52	-2.00	0.46	0.893939
10149	3R_DroMel_CAF1	27,248,885 – 27,249,005	- - - - - - - - -	16152	27,248,885 – 27,249,005	-	5	120	92.99	-1.38	0.82	0.599473
10150	3R_DroMel_CAF1	27,254,429 – 27,254,526	- - - - - - - - -	16153	27,254,429 – 27,254,526	-	6	119	79.82	-2.06	0.59	0.811136
10151	3R_DroMel_CAF1	27,254,683 – 27,254,776	- - - - - - - - -	16154	27,254,683 – 27,254,776	+	5	95	92.51	-2.57	0.82	0.994293
10152	3R_DroMel_CAF1	27,265,095 – 27,265,190	- - - - - - - - -	16155	27,265,095 – 27,265,190	+	4	99	93.99	-1.97	0.81	0.724837
10153	3R_DroMel_CAF1	27,270,806 – 27,270,896	- - - - - - - - -	16156	27,270,806 – 27,270,896	-	3	90	84.38	-1.24	0.86	0.500000
10154	3R_DroMel_CAF1	27,272,097 – 27,272,202	- - - - - - - - -	16157	27,272,097 – 27,272,202	-	5	111	86.82	-2.49	0.72	0.920829
10155	3R_DroMel_CAF1	27,276,812 – 27,276,910	- - - - - - - - -	16158	27,276,812 – 27,276,910	+	6	111	83.88	-1.79	0.75	0.586545
10156	3R_DroMel_CAF1	27,278,009 – 27,278,099	- - - - - - - - -	16159	27,278,009 – 27,278,099	+	3	90	90.87	-1.97	0.89	0.761330
10157	3R_DroMel_CAF1	27,281,798 – 27,281,918	- - - "knownCDS=Parent=FBtr0085788;Name=Gprk2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17998-RA" - - - - -	16160	27,281,798 – 27,281,918	+	6	120	90.11	-2.40	0.87	0.973202
10158	3R_DroMel_CAF1	27,288,963 – 27,289,060	- - - - - - - - -	16161	27,288,963 – 27,289,060	+	5	97	91.03	-1.36	0.82	0.573446
10159	3R_DroMel_CAF1	27,290,183 – 27,290,290	- - - - - - - - -	16162	27,290,183 – 27,290,290	+	5	110	92.05	-2.21	0.89	0.998567
10159	3R_DroMel_CAF1	27,290,183 – 27,290,290	- - - - - - - - -	16163	27,290,183 – 27,290,290	-	5	110	92.05	-2.05	0.86	0.990758
10160	3R_DroMel_CAF1	27,290,862 – 27,290,956	- - - - - - - - -	16164	27,290,862 – 27,290,956	+	5	95	98.31	-1.33	0.98	0.848484
10160	3R_DroMel_CAF1	27,290,862 – 27,290,956	- - - - - - - - -	16165	27,290,862 – 27,290,956	-	5	95	98.31	-2.02	0.97	0.997184
10161	3R_DroMel_CAF1	27,290,996 – 27,291,096	- - - - - - - - -	16166	27,290,996 – 27,291,096	+	5	115	91.74	-1.96	0.87	0.989280
10161	3R_DroMel_CAF1	27,290,996 – 27,291,096	- - - - - - - - -	16167	27,290,996 – 27,291,096	-	5	115	91.74	-2.00	0.72	0.543100
10162	3R_DroMel_CAF1	27,292,059 – 27,292,152	- - - - - - - - -	16168	27,292,059 – 27,292,152	+	5	106	85.52	-2.17	0.61	0.562401
10163	3R_DroMel_CAF1	27,293,842 – 27,293,935	- - - - - - - - -	16169	27,293,842 – 27,293,935	+	6	95	79.33	-2.52	0.54	0.911570
10163	3R_DroMel_CAF1	27,293,842 – 27,293,935	- - - - - - - - -	16170	27,293,842 – 27,293,935	-	6	95	79.33	-2.66	0.69	0.966023
10164	3R_DroMel_CAF1	27,295,525 – 27,295,741	- - - - - - - - -	16171	27,295,525 – 27,295,639	-	4	117	90.76	-2.10	0.70	0.577501
10164	3R_DroMel_CAF1	27,295,525 – 27,295,741	- - - - - - - - -	16172	27,295,639 – 27,295,741	+	4	117	84.32	-1.92	0.72	0.812468
10165	3R_DroMel_CAF1	27,296,801 – 27,296,910	- - - - - - - - -	16173	27,296,801 – 27,296,910	+	5	120	89.42	-1.48	0.75	0.500000
10166	3R_DroMel_CAF1	27,296,947 – 27,297,149	- - - - - - - - -	16174	27,296,947 – 27,297,059	+	5	120	73.73	-2.08	0.58	0.970890
				16175	27,296,947 – 27,297,059	-	5	120	73.73	-2.27	0.59	0.990648
				16176	27,296,987 – 27,297,098	+	5	120	77.02	-1.94	0.64	0.913667
				16177	27,296,987 – 27,297,098	-	5	120	77.02	-3.39	0.64	0.999658
				16178	27,297,019 – 27,297,127	+	5	120	82.38	-1.71	0.81	0.761553
				16179	27,297,019 – 27,297,127	-	5	120	82.38	-2.90	0.76	0.994177
				16180	27,297,059 – 27,297,149	-	4	90	99.44	-1.74	0.98	0.526356
10167	3R_DroMel_CAF1	27,297,608 – 27,297,728	- - - - - - - - -	16181	27,297,608 – 27,297,728	+	4	120	88.47	-1.86	0.78	0.803277
10168	3R_DroMel_CAF1	27,299,025 – 27,299,119	- - - - - - - - -	16182	27,299,025 – 27,299,119	-	6	120	86.49	-2.13	0.81	0.713949
10169	3R_DroMel_CAF1	27,299,189 – 27,299,375	- - "RNAmicro=f:27299189_t:27299308_strand:-_p:0.723886" - - - - - -	16183	27,299,189 – 27,299,295	+	6	120	94.28	-2.34	0.96	0.999740
				16184	27,299,189 – 27,299,295	-	6	120	94.28	-2.74	0.97	0.999966
				16185	27,299,229 – 27,299,335	+	5	106	99.06	-2.54	1.00	0.999593
				16186	27,299,229 – 27,299,335	-	5	106	99.06	-2.74	1.00	0.999762
				16187	27,299,269 – 27,299,375	+	5	106	91.98	-2.28	0.80	0.977515
				16188	27,299,269 – 27,299,375	-	5	106	91.98	-2.46	0.87	0.998710
10170	3R_DroMel_CAF1	27,299,718 – 27,299,809	- - - - - - - - -	16189	27,299,718 – 27,299,809	+	3	97	89.82	-1.70	0.91	0.690771
10171	3R_DroMel_CAF1	27,300,031 – 27,300,130	- - - - - - - - -	16190	27,300,031 – 27,300,130	+	6	120	81.51	-2.00	0.67	0.768654
10172	3R_DroMel_CAF1	27,300,370 – 27,300,614	- - - - - - - - -	16191	27,300,370 – 27,300,481	+	6	120	93.83	-3.45	0.79	0.930646
				16192	27,300,409 – 27,300,517	+	6	120	88.53	-2.89	0.83	0.938719
				16193	27,300,447 – 27,300,557	+	6	120	80.80	-2.29	0.68	0.889255
				16194	27,300,517 – 27,300,614	+	4	115	80.99	-2.26	0.54	0.611494
				16195	27,300,517 – 27,300,614	-	4	115	80.99	-2.20	0.59	0.794941
10173	3R_DroMel_CAF1	27,303,000 – 27,303,195	- - - - - - - - -	16196	27,303,000 – 27,303,118	-	6	120	87.19	-2.35	0.78	0.650412
				16197	27,303,040 – 27,303,155	+	6	120	84.23	-2.30	0.72	0.640532
				16198	27,303,078 – 27,303,195	+	6	120	76.33	-2.48	0.46	0.951682
10174	3R_DroMel_CAF1	27,303,904 – 27,304,039	- - - - - - - - -	16199	27,303,904 – 27,304,008	+	6	120	79.88	-2.21	0.66	0.910383
10174	3R_DroMel_CAF1	27,303,904 – 27,304,039	- - - - - - - - -	16200	27,303,930 – 27,304,039	+	6	120	82.49	-1.68	0.69	0.604708
10175	3R_DroMel_CAF1	27,304,198 – 27,304,331	- - - - - - - - -	16201	27,304,198 – 27,304,291	+	6	120	79.87	-1.90	0.56	0.612681
				16202	27,304,198 – 27,304,291	-	6	120	79.87	-3.46	0.68	0.976761
				16203	27,304,231 – 27,304,331	+	6	120	84.88	-2.42	0.78	0.786763
				16204	27,304,231 – 27,304,331	-	6	120	84.88	-3.22	0.72	0.812155
10176	3R_DroMel_CAF1	27,304,441 – 27,304,543	- - - - - - - - -	16205	27,304,441 – 27,304,543	+	6	120	72.57	-2.39	0.33	0.919869
10177	3R_DroMel_CAF1	27,304,687 – 27,304,790	- - - - - - - - -	16206	27,304,687 – 27,304,790	-	6	120	93.93	-1.07	0.98	0.932000
10178	3R_DroMel_CAF1	27,304,820 – 27,304,918	- - - - - - - - -	16207	27,304,820 – 27,304,918	+	6	120	81.39	-2.12	0.59	0.681395
10179	3R_DroMel_CAF1	27,305,590 – 27,305,692	- - - - - - - - -	16208	27,305,590 – 27,305,692	+	5	109	93.36	-3.30	0.86	0.999732
10179	3R_DroMel_CAF1	27,305,590 – 27,305,692	- - - - - - - - -	16209	27,305,590 – 27,305,692	-	5	109	93.36	-2.35	0.88	0.998960
10180	3R_DroMel_CAF1	27,306,188 – 27,306,307	- - - - - - - - -	16210	27,306,188 – 27,306,307	-	5	119	95.13	-1.55	0.97	0.987153
10181	3R_DroMel_CAF1	27,306,490 – 27,306,610	- - - - - - - - -	16211	27,306,490 – 27,306,610	-	6	120	99.17	-0.99	0.98	0.896169
10182	3R_DroMel_CAF1	27,310,854 – 27,310,994	- - - - - - - - -	16212	27,310,854 – 27,310,954	-	6	120	88.12	-2.64	0.87	0.978830
10182	3R_DroMel_CAF1	27,310,854 – 27,310,994	- - - - - - - - -	16213	27,310,874 – 27,310,994	-	6	120	94.44	-1.25	0.91	0.752347
10183	3R_DroMel_CAF1	27,315,283 – 27,315,400	- - - - - - - - -	16214	27,315,283 – 27,315,400	-	6	119	74.97	-1.98	0.56	0.931718
10184	3R_DroMel_CAF1	27,317,091 – 27,317,221	- - - - - - - - -	16215	27,317,091 – 27,317,188	+	6	112	78.70	-1.82	0.75	0.924091
				16216	27,317,091 – 27,317,188	-	6	112	78.70	-1.50	0.77	0.863995
				16217	27,317,124 – 27,317,221	+	6	118	87.52	-2.90	0.94	0.998407
				16218	27,317,124 – 27,317,221	-	6	118	87.52	-2.08	0.79	0.577749
10185	3R_DroMel_CAF1	27,320,296 – 27,320,387	- - - - - - - - -	16219	27,320,296 – 27,320,387	-	6	95	78.13	-2.67	0.38	0.800699
10186	3R_DroMel_CAF1	27,320,734 – 27,320,838	- - - - - - - - -	16220	27,320,734 – 27,320,838	-	5	114	72.47	-1.75	0.20	0.767031
10187	3R_DroMel_CAF1	27,321,112 – 27,321,209	- - - - - - - - -	16221	27,321,112 – 27,321,209	+	6	120	71.19	-1.90	0.38	0.671648
10188	3R_DroMel_CAF1	27,322,004 – 27,322,095	- - - - - - - - -	16222	27,322,004 – 27,322,095	+	4	91	97.07	-1.55	0.96	0.590666
10189	3R_DroMel_CAF1	27,326,945 – 27,327,039	- - - - - - - - -	16223	27,326,945 – 27,327,039	+	6	116	85.72	-3.41	0.76	0.889667
10189	3R_DroMel_CAF1	27,326,945 – 27,327,039	- - - - - - - - -	16224	27,326,945 – 27,327,039	-	6	116	85.72	-2.98	0.77	0.833809
10190	3R_DroMel_CAF1	27,337,075 – 27,337,171	- - - - - - - - -	16225	27,337,075 – 27,337,171	+	6	103	80.83	-1.97	0.61	0.731407
10191	3R_DroMel_CAF1	27,346,825 – 27,346,917	- - - - - - - - -	16226	27,346,825 – 27,346,917	+	6	101	80.38	-1.59	0.86	0.834244
10191	3R_DroMel_CAF1	27,346,825 – 27,346,917	- - - - - - - - -	16227	27,346,825 – 27,346,917	-	6	101	80.38	-2.93	0.86	0.970216
10192	3R_DroMel_CAF1	27,352,936 – 27,353,097	- - - - - - - - -	16228	27,352,936 – 27,353,036	-	5	100	85.03	-2.33	0.71	0.906145
10192	3R_DroMel_CAF1	27,352,936 – 27,353,097	- - - - - - - - -	16229	27,352,999 – 27,353,097	-	6	98	85.42	-2.72	0.72	0.616249
10193	3R_DroMel_CAF1	27,355,983 – 27,356,124	- - - - - - - - -	16230	27,355,983 – 27,356,090	-	6	114	85.50	-2.19	0.79	0.717979
10193	3R_DroMel_CAF1	27,355,983 – 27,356,124	- - - - - - - - -	16231	27,356,014 – 27,356,124	-	6	116	85.24	-2.21	0.73	0.553597
10194	3R_DroMel_CAF1	27,356,838 – 27,356,967	- - - - - - - - -	16232	27,356,838 – 27,356,930	-	4	92	89.13	-1.55	0.73	0.549540
10194	3R_DroMel_CAF1	27,356,838 – 27,356,967	- - - - - - - - -	16233	27,356,863 – 27,356,967	-	5	104	81.42	-2.54	0.54	0.912399
10195	3R_DroMel_CAF1	27,357,390 – 27,357,526	- - - - - - - - -	16234	27,357,390 – 27,357,488	+	5	106	93.48	-2.74	0.89	0.999816
				16235	27,357,390 – 27,357,488	-	5	106	93.48	-2.93	0.81	0.996683
				16236	27,357,422 – 27,357,526	-	5	107	94.49	-1.45	0.88	0.863340
10196	3R_DroMel_CAF1	27,358,177 – 27,358,269	- - - - - - - - -	16237	27,358,177 – 27,358,269	-	6	108	82.74	-2.45	0.63	0.709346
10197	3R_DroMel_CAF1	27,363,048 – 27,363,155	- - - - - - - - -	16238	27,363,048 – 27,363,155	-	4	120	73.42	-1.99	0.47	0.500000
10198	3R_DroMel_CAF1	27,363,702 – 27,363,812	- - - - - - - - -	16239	27,363,702 – 27,363,812	+	6	114	90.66	-1.52	0.86	0.622295
10198	3R_DroMel_CAF1	27,363,702 – 27,363,812	- - - - - - - - -	16240	27,363,702 – 27,363,812	-	6	114	90.66	-1.93	0.86	0.875984
10199	3R_DroMel_CAF1	27,363,879 – 27,363,976	- - - - - - - - -	16241	27,363,879 – 27,363,976	-	6	120	81.91	-1.55	0.65	0.527644
10200	3R_DroMel_CAF1	27,366,451 – 27,366,554	- - - - - - - - -	16242	27,366,451 – 27,366,554	-	6	109	87.14	-2.41	0.89	0.977676
10201	3R_DroMel_CAF1	27,370,336 – 27,370,443	- - - - - - - - -	16243	27,370,336 – 27,370,443	-	6	120	77.62	-1.47	0.71	0.863359
10202	3R_DroMel_CAF1	27,371,344 – 27,371,437	- - - - - - - - -	16244	27,371,344 – 27,371,437	+	5	94	96.14	-1.87	0.91	0.991724
10203	3R_DroMel_CAF1	27,375,270 – 27,375,364	- - - - - - - - -	16245	27,375,270 – 27,375,364	+	6	109	75.69	-1.88	0.52	0.784915
10204	3R_DroMel_CAF1	27,376,041 – 27,376,132	- - - - - - - - -	16246	27,376,041 – 27,376,132	+	5	97	94.81	-3.01	0.85	0.999103
10204	3R_DroMel_CAF1	27,376,041 – 27,376,132	- - - - - - - - -	16247	27,376,041 – 27,376,132	-	5	97	94.81	-1.75	0.87	0.963039
10205	3R_DroMel_CAF1	27,376,532 – 27,376,698	- - - - - - - - -	16248	27,376,532 – 27,376,631	+	5	111	87.43	-1.92	0.73	0.743437
				16249	27,376,532 – 27,376,631	-	5	111	87.43	-2.64	0.71	0.930222
				16250	27,376,591 – 27,376,698	-	5	107	97.75	-1.59	0.97	0.975066
10206	3R_DroMel_CAF1	27,377,519 – 27,377,628	- - - - - - - - -	16251	27,377,519 – 27,377,628	-	6	109	95.72	-2.00	0.84	0.815350
10207	3R_DroMel_CAF1	27,377,864 – 27,377,970	- - - - - - - - -	16252	27,377,864 – 27,377,970	-	6	106	83.76	-2.68	0.59	0.521448
10208	3R_DroMel_CAF1	27,379,105 – 27,379,203	- - - - - - - - -	16253	27,379,105 – 27,379,203	-	3	98	88.15	-1.25	0.92	0.506604
10209	3R_DroMel_CAF1	27,391,318 – 27,391,410	- - - - - - - - -	16254	27,391,318 – 27,391,410	+	6	106	78.28	-1.33	0.72	0.776867
10209	3R_DroMel_CAF1	27,391,318 – 27,391,410	- - - - - - - - -	16255	27,391,318 – 27,391,410	-	6	106	78.28	-1.14	0.76	0.724575
10210	3R_DroMel_CAF1	27,391,540 – 27,391,647	- - - - - - - - -	16256	27,391,540 – 27,391,647	+	6	111	84.85	-2.53	0.79	0.830849
10211	3R_DroMel_CAF1	27,392,985 – 27,393,134	- - - - - - - - -	16257	27,392,985 – 27,393,081	+	6	120	78.00	-2.48	0.65	0.974563
				16258	27,393,002 – 27,393,106	+	6	120	83.25	-3.65	0.64	0.893420
				16259	27,393,041 – 27,393,134	+	6	106	79.15	-1.96	0.67	0.903304
10212	3R_DroMel_CAF1	27,395,359 – 27,395,470	- - - - - - - - -	16260	27,395,359 – 27,395,470	+	5	114	76.62	-2.54	0.60	0.994082
10212	3R_DroMel_CAF1	27,395,359 – 27,395,470	- - - - - - - - -	16261	27,395,359 – 27,395,470	-	5	114	76.62	-2.07	0.42	0.850565
10213	3R_DroMel_CAF1	27,395,942 – 27,396,059	- - - - - - - - -	16262	27,395,942 – 27,396,043	-	5	101	99.01	-1.76	1.00	0.985849
10213	3R_DroMel_CAF1	27,395,942 – 27,396,059	- - - - - - - - -	16263	27,395,963 – 27,396,059	-	5	96	99.17	-1.88	1.00	0.992473
10214	3R_DroMel_CAF1	27,397,068 – 27,397,186	- - - - - - - - -	16264	27,397,068 – 27,397,186	-	5	118	97.80	-1.82	0.96	0.992909
10215	3R_DroMel_CAF1	27,397,575 – 27,397,713	- - - - - - - - -	16265	27,397,575 – 27,397,679	+	5	120	73.96	-2.14	0.65	0.988512
				16266	27,397,575 – 27,397,679	-	5	120	73.96	-2.07	0.61	0.973607
				16267	27,397,605 – 27,397,713	+	5	120	71.33	-1.39	0.67	0.821447
10216	3R_DroMel_CAF1	27,401,045 – 27,401,193	- - - - - - - - -	16268	27,401,045 – 27,401,165	+	6	120	78.78	-2.16	0.55	0.850763
				16269	27,401,045 – 27,401,165	-	6	120	78.78	-1.59	0.65	0.772620
				16270	27,401,085 – 27,401,193	+	6	108	81.12	-1.67	0.85	0.829189
10217	3R_DroMel_CAF1	27,403,173 – 27,403,322	- - - "knownCDS=Parent=FBtr0085806;Name=pygo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11518-RA" - - - - -	16271	27,403,173 – 27,403,263	-	6	99	80.44	-1.71	0.60	0.591241
				16272	27,403,207 – 27,403,297	+	6	93	88.79	-4.51	0.75	0.972291
				16273	27,403,207 – 27,403,297	-	6	93	88.79	-3.04	0.76	0.728054
				16274	27,403,226 – 27,403,322	+	6	105	83.22	-3.28	0.75	0.916565
				16275	27,403,226 – 27,403,322	-	6	105	83.22	-2.75	0.63	0.717014
10218	3R_DroMel_CAF1	27,404,199 – 27,404,359	- - - "knownCDS=Parent=FBtr0085806;Name=pygo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11518-RA" - - - - -	16276	27,404,199 – 27,404,319	-	6	120	78.13	-1.33	0.65	0.611103
10218	3R_DroMel_CAF1	27,404,199 – 27,404,359		16277	27,404,239 – 27,404,359	-	6	120	80.08	-1.26	0.68	0.570858
10219	3R_DroMel_CAF1	27,404,403 – 27,404,524	- - - "knownCDS=Parent=FBtr0085806;Name=pygo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11518-RA" - - - - -	16278	27,404,403 – 27,404,503	+	6	113	77.78	-2.83	0.61	0.986542
				16279	27,404,403 – 27,404,503	-	6	113	77.78	-2.79	0.55	0.981757
				16280	27,404,428 – 27,404,524	+	6	111	76.00	-2.33	0.37	0.718235
				16281	27,404,428 – 27,404,524	-	6	111	76.00	-2.35	0.44	0.901408
10220	3R_DroMel_CAF1	27,404,604 – 27,404,724	- - - "knownCDS=Parent=FBtr0085806;Name=pygo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11518-RA" - - - - -	16282	27,404,604 – 27,404,724	+	6	120	77.69	-2.43	0.48	0.912954
10221	3R_DroMel_CAF1	27,404,774 – 27,404,913	- - - "knownCDS=Parent=FBtr0085806;Name=pygo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11518-RA" - - - - -	16283	27,404,774 – 27,404,873	-	6	99	85.72	-2.93	0.71	0.625533
10221	3R_DroMel_CAF1	27,404,774 – 27,404,913		16284	27,404,811 – 27,404,913	-	6	102	81.92	-3.21	0.65	0.921050
10222	3R_DroMel_CAF1	27,405,068 – 27,405,176	- - - "knownCDS=Parent=FBtr0085806;Name=pygo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11518-RA" - - - - -	16285	27,405,068 – 27,405,176	+	5	111	83.15	-1.98	0.82	0.906191
10223	3R_DroMel_CAF1	27,405,210 – 27,405,370	- - - "knownCDS=Parent=FBtr0085806;Name=pygo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11518-RA" - - - - -	16286	27,405,210 – 27,405,330	+	6	120	88.33	-1.39	0.88	0.537168
10223	3R_DroMel_CAF1	27,405,210 – 27,405,370		16287	27,405,250 – 27,405,370	-	6	120	89.22	-1.43	0.89	0.685453
10224	3R_DroMel_CAF1	27,408,690 – 27,408,810	- - - "knownCDS=Parent=FBtr0085795;Name=rod-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1569-RA" - - - - -	16288	27,408,690 – 27,408,810	+	6	120	80.33	-2.06	0.58	0.743211
10224	3R_DroMel_CAF1	27,408,690 – 27,408,810		16289	27,408,690 – 27,408,810	-	6	120	80.33	-2.62	0.59	0.913136
10225	3R_DroMel_CAF1	27,408,890 – 27,408,982	- - - "knownCDS=Parent=FBtr0085795;Name=rod-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1569-RA" - - - - -	16290	27,408,890 – 27,408,982	+	6	100	82.48	-1.56	0.68	0.540820
10226	3R_DroMel_CAF1	27,413,740 – 27,413,851	- - - "knownCDS=Parent=FBtr0085795;Name=rod-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1569-RA" - - - - -	16291	27,413,740 – 27,413,851	+	6	111	81.28	-2.09	0.67	0.812360
10226	3R_DroMel_CAF1	27,413,740 – 27,413,851		16292	27,413,740 – 27,413,851	-	6	111	81.28	-1.22	0.72	0.531291
10227	3R_DroMel_CAF1	27,416,922 – 27,417,082	- - - "knownCDS=Parent=FBtr0085797;Name=CG1638-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1638-RA" - - - - -	16293	27,416,922 – 27,417,042	+	5	120	91.25	-1.47	0.83	0.729106
				16294	27,416,922 – 27,417,042	-	5	120	91.25	-1.41	0.80	0.559477
				16295	27,416,962 – 27,417,082	+	5	120	91.08	-2.37	0.86	0.997473
				16296	27,416,962 – 27,417,082	-	5	120	91.08	-1.44	0.84	0.740252
10228	3R_DroMel_CAF1	27,417,162 – 27,417,282	- - - "knownCDS=Parent=FBtr0085797;Name=CG1638-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1638-RA" - - - - -	16297	27,417,162 – 27,417,282	-	5	120	89.50	-1.49	0.91	0.870893
10229	3R_DroMel_CAF1	27,417,402 – 27,417,522	- - - "knownCDS=Parent=FBtr0085797;Name=CG1638-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1638-RA" - - - - -	16298	27,417,402 – 27,417,522	+	5	120	93.00	-1.23	0.84	0.500000
10230	3R_DroMel_CAF1	27,419,576 – 27,419,676	- - - "knownCDS=Parent=FBtr0085798;Name=CG1774-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1774-RA" - - - - -	16299	27,419,576 – 27,419,676	-	6	100	76.00	-2.06	0.48	0.798022
10231	3R_DroMel_CAF1	27,422,605 – 27,422,753	- - - - - - - - -	16300	27,422,605 – 27,422,713	+	3	120	82.76	-2.44	0.59	0.641651
				16301	27,422,605 – 27,422,713	-	3	120	82.76	-2.37	0.72	0.908185
				16302	27,422,644 – 27,422,753	+	3	120	82.23	-1.73	0.68	0.564085
				16303	27,422,644 – 27,422,753	-	3	120	82.23	-3.40	0.71	0.992807
10232	3R_DroMel_CAF1	27,423,265 – 27,423,384	- - - - - - - - -	16304	27,423,265 – 27,423,384	-	3	120	96.66	-1.85	0.89	0.568238
10233	3R_DroMel_CAF1	27,425,463 – 27,425,566	- - - - - - - - -	16305	27,425,463 – 27,425,566	+	6	106	83.55	-1.45	0.79	0.521712
10234	3R_DroMel_CAF1	27,426,139 – 27,426,299	- - - "knownCDS=Parent=FBtr0085801;Name=CycG-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11525-RE" - - - - -	16306	27,426,139 – 27,426,259	+	6	120	90.89	-2.40	0.94	0.999018
				16307	27,426,139 – 27,426,259	-	6	120	90.89	-1.88	0.87	0.880075
				16308	27,426,179 – 27,426,299	+	6	120	90.67	-3.14	0.93	0.999717
				16309	27,426,179 – 27,426,299	-	6	120	90.67	-3.17	0.88	0.997772
10235	3R_DroMel_CAF1	27,428,007 – 27,428,135	- - - - - - - - -	16310	27,428,007 – 27,428,109	-	6	116	77.43	-1.60	0.56	0.573588
10235	3R_DroMel_CAF1	27,428,007 – 27,428,135	- - - - - - - - -	16311	27,428,045 – 27,428,135	-	6	103	78.94	-2.24	0.64	0.935817
10236	3R_DroMel_CAF1	27,428,605 – 27,428,709	- - - - - - - - -	16312	27,428,605 – 27,428,709	+	6	117	78.92	-2.27	0.45	0.617323
10236	3R_DroMel_CAF1	27,428,605 – 27,428,709	- - - - - - - - -	16313	27,428,605 – 27,428,709	-	6	117	78.92	-2.49	0.52	0.909940
10237	3R_DroMel_CAF1	27,430,569 – 27,430,679	- - - - - - - - -	16314	27,430,569 – 27,430,661	+	5	95	79.33	-2.44	0.55	0.959751
10237	3R_DroMel_CAF1	27,430,569 – 27,430,679	- - - - - - - - -	16315	27,430,587 – 27,430,679	+	3	95	78.78	-1.77	0.69	0.825346
10238	3R_DroMel_CAF1	27,437,317 – 27,437,457	- - - "knownCDS=Parent=FBtr0085816, FBtr0085815;Name=Med-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1775-RB, FlyBase+Annotation+IDs:CG1775-RA" - - - - -	16316	27,437,317 – 27,437,417	+	6	120	76.38	-1.78	0.73	0.958039
				16317	27,437,317 – 27,437,417	-	6	120	76.38	-1.79	0.56	0.779872
				16318	27,437,340 – 27,437,457	+	6	120	82.30	-1.64	0.73	0.657318
10239	3R_DroMel_CAF1	27,440,184 – 27,440,352	- - - "knownCDS=Parent=FBtr0085816, FBtr0085815;Name=Med-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1775-RB, FlyBase+Annotation+IDs:CG1775-RA" - - - - -	16319	27,440,184 – 27,440,275	-	6	105	76.79	-1.18	0.71	0.740801
				16320	27,440,205 – 27,440,315	+	6	118	76.99	-1.06	0.78	0.774945
				16321	27,440,205 – 27,440,315	-	6	118	76.99	-1.99	0.74	0.968003
				16322	27,440,235 – 27,440,352	+	6	120	81.69	-1.79	0.61	0.547907
10240	3R_DroMel_CAF1	27,444,079 – 27,444,195	- - - - - - - - -	16323	27,444,079 – 27,444,195	+	6	120	87.22	-2.63	0.77	0.654243
10241	3R_DroMel_CAF1	27,448,830 – 27,448,948	- - - - - - - - -	16324	27,448,830 – 27,448,948	+	5	120	74.02	-2.39	0.28	0.990754
10242	3R_DroMel_CAF1	27,450,655 – 27,450,766	- - - - - - - - -	16325	27,450,655 – 27,450,766	-	5	111	83.44	-1.73	0.67	0.573737
10243	3R_DroMel_CAF1	27,451,255 – 27,451,361	- - - - - - - - -	16326	27,451,255 – 27,451,361	+	6	120	81.69	-2.22	0.62	0.743692
10244	3R_DroMel_CAF1	27,452,242 – 27,452,355	- - - - - - - - -	16327	27,452,242 – 27,452,355	-	6	116	90.98	-2.57	0.80	0.778829
10245	3R_DroMel_CAF1	27,452,540 – 27,452,634	- - - - - - - - -	16328	27,452,540 – 27,452,634	-	5	101	74.12	-2.09	0.57	0.965524
10246	3R_DroMel_CAF1	27,452,665 – 27,452,771	- - - - - - - - -	16329	27,452,665 – 27,452,771	+	6	117	76.99	-1.85	0.50	0.589657
10247	3R_DroMel_CAF1	27,453,664 – 27,453,764	- - - - - - - - -	16330	27,453,664 – 27,453,764	+	5	111	78.13	-2.03	0.49	0.766297
10248	3R_DroMel_CAF1	27,455,876 – 27,455,978	- - - - - - - - -	16331	27,455,876 – 27,455,978	+	3	102	96.73	-1.61	0.97	0.688225
10249	3R_DroMel_CAF1	27,456,481 – 27,456,600	- - - - - - - - -	16332	27,456,481 – 27,456,586	+	6	105	81.40	-1.54	0.66	0.590328
				16333	27,456,481 – 27,456,586	-	6	105	81.40	-1.16	0.80	0.522486
				16334	27,456,506 – 27,456,600	-	6	94	93.93	-1.76	0.91	0.973215
10250	3R_DroMel_CAF1	27,458,911 – 27,459,050	- - - - - - - - -	16335	27,458,911 – 27,459,018	+	6	115	74.24	-1.60	0.51	0.532749
				16336	27,458,911 – 27,459,018	-	6	115	74.24	-1.71	0.58	0.868026
				16337	27,458,949 – 27,459,050	+	5	103	83.38	-3.25	0.69	0.993312
				16338	27,458,949 – 27,459,050	-	5	103	83.38	-3.40	0.71	0.996109
10251	3R_DroMel_CAF1	27,461,599 – 27,461,698	- - - - - - - - -	16339	27,461,599 – 27,461,698	-	6	120	80.15	-1.27	0.78	0.685593
10252	3R_DroMel_CAF1	27,462,651 – 27,462,755	- - - - - - - - -	16340	27,462,651 – 27,462,755	-	6	119	79.70	-2.90	0.49	0.929799
10253	3R_DroMel_CAF1	27,466,061 – 27,466,197	- - - - - - - - -	16341	27,466,061 – 27,466,157	-	6	120	77.83	-1.98	0.64	0.925944
10253	3R_DroMel_CAF1	27,466,061 – 27,466,197	- - - - - - - - -	16342	27,466,101 – 27,466,197	-	6	118	78.27	-1.56	0.60	0.645561
10254	3R_DroMel_CAF1	27,467,092 – 27,467,242	- - - - - - - - -	16343	27,467,092 – 27,467,203	-	6	120	73.66	-1.93	0.44	0.732598
10254	3R_DroMel_CAF1	27,467,092 – 27,467,242	- - - - - - - - -	16344	27,467,130 – 27,467,242	+	6	119	84.03	-1.44	0.83	0.526656
10255	3R_DroMel_CAF1	27,468,193 – 27,468,290	- - - - - - - - -	16345	27,468,193 – 27,468,290	+	6	120	79.96	-2.02	0.81	0.924943
10256	3R_DroMel_CAF1	27,468,416 – 27,468,533	- - - - - - - - -	16346	27,468,416 – 27,468,514	+	5	120	86.80	-2.52	0.69	0.867951
10256	3R_DroMel_CAF1	27,468,416 – 27,468,533	- - - - - - - - -	16347	27,468,434 – 27,468,533	+	5	120	75.72	-1.60	0.61	0.633698
10257	3R_DroMel_CAF1	27,469,917 – 27,470,026	- - - - - - - - -	16348	27,469,917 – 27,470,026	-	6	110	76.01	-2.42	0.57	0.982081
10258	3R_DroMel_CAF1	27,470,798 – 27,470,909	- - - - - - - - -	16349	27,470,798 – 27,470,909	-	6	112	81.93	-1.51	0.80	0.688944
10259	3R_DroMel_CAF1	27,473,811 – 27,473,950	- - - - - - - - -	16350	27,473,811 – 27,473,913	-	6	118	73.98	-1.99	0.58	0.956895
10259	3R_DroMel_CAF1	27,473,811 – 27,473,950	- - - - - - - - -	16351	27,473,847 – 27,473,950	-	6	120	79.47	-2.99	0.52	0.959014
10260	3R_DroMel_CAF1	27,474,320 – 27,474,419	- - - - - - - - -	16352	27,474,320 – 27,474,419	-	6	120	77.59	-2.02	0.61	0.923175
10261	3R_DroMel_CAF1	27,475,475 – 27,475,580	- - - - - - - - -	16353	27,475,475 – 27,475,580	+	4	105	94.60	-1.80	0.82	0.608230
10262	3R_DroMel_CAF1	27,479,203 – 27,479,301	- - - - - - - - -	16354	27,479,203 – 27,479,301	-	5	120	82.77	-1.66	0.78	0.672057
10263	3R_DroMel_CAF1	27,480,724 – 27,480,827	- - - - - - - - -	16355	27,480,724 – 27,480,827	-	6	104	81.25	-1.57	0.70	0.677212
10264	3R_DroMel_CAF1	27,484,943 – 27,485,063	- - - "knownCDS=Parent=FBtr0085821;Name=kek6-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1804-RA" - - - - -	16356	27,484,943 – 27,485,063	+	6	120	84.44	-2.17	0.73	0.623069
10265	3R_DroMel_CAF1	27,485,783 – 27,485,903	- - - "knownCDS=Parent=FBtr0085821;Name=kek6-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1804-RA" - - - - -	16357	27,485,783 – 27,485,903	+	6	120	80.11	-1.64	0.61	0.613209
10266	3R_DroMel_CAF1	27,501,342 – 27,501,446	- - - "knownCDS=Parent=FBtr0085823;Name=CG1815-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1815-RB" - - - - -	16358	27,501,342 – 27,501,446	-	6	104	82.95	-2.32	0.76	0.829676
10267	3R_DroMel_CAF1	27,501,560 – 27,501,653	- - - - - - - - -	16359	27,501,560 – 27,501,653	-	6	93	76.70	-1.11	0.75	0.778762
10268	3R_DroMel_CAF1	27,502,346 – 27,502,439	- - - "knownCDS=Parent=FBtr0085824;Name=CG1815-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1815-RC" - - - - -	16360	27,502,346 – 27,502,439	-	6	100	71.94	-1.97	0.40	0.785584
10269	3R_DroMel_CAF1	27,510,899 – 27,510,993	- - - - - - - - -	16361	27,510,899 – 27,510,993	-	5	103	88.85	-2.01	0.95	0.996588
10270	3R_DroMel_CAF1	27,513,024 – 27,513,115	- - - - - - - - -	16362	27,513,024 – 27,513,115	-	6	108	74.11	-1.30	0.65	0.779916
10271	3R_DroMel_CAF1	27,514,755 – 27,514,845	- - - - - - - - -	16363	27,514,755 – 27,514,845	-	6	98	82.22	-2.94	0.58	0.822834
10272	3R_DroMel_CAF1	27,531,017 – 27,531,123	- - - - - - - - -	16364	27,531,017 – 27,531,123	+	5	106	81.26	-1.62	0.77	0.699833
10273	3R_DroMel_CAF1	27,531,797 – 27,531,909	- - - - - - - - -	16365	27,531,797 – 27,531,909	+	5	112	90.02	-1.28	0.85	0.524603
10274	3R_DroMel_CAF1	27,535,784 – 27,535,878	- - - - - - - - -	16366	27,535,784 – 27,535,878	+	6	94	94.75	-1.82	0.94	0.995240
10274	3R_DroMel_CAF1	27,535,784 – 27,535,878	- - - - - - - - -	16367	27,535,784 – 27,535,878	-	6	94	94.75	-1.71	0.92	0.979651
10275	3R_DroMel_CAF1	27,543,945 – 27,544,049	- - - - - - - - -	16368	27,543,945 – 27,544,049	+	6	109	80.39	-1.51	0.69	0.704222
10276	3R_DroMel_CAF1	27,546,090 – 27,546,196	- - - - - - - - -	16369	27,546,090 – 27,546,196	-	6	113	82.14	-2.42	0.56	0.626832
10277	3R_DroMel_CAF1	27,546,381 – 27,546,497	- - - - - - - - -	16370	27,546,381 – 27,546,497	-	5	116	90.17	-1.35	0.80	0.509890
10278	3R_DroMel_CAF1	27,547,580 – 27,547,675	- - - - - - - - -	16371	27,547,580 – 27,547,675	-	6	96	90.14	-1.83	0.85	0.743032
10279	3R_DroMel_CAF1	27,556,352 – 27,556,444	- - - "knownCDS=Parent=FBtr0085826, FBtr0085828, FBtr0085830;Name=ttk-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1856-RF, FlyBase+Annotation+IDs:CG1856-RC, FlyBase+Annotation+IDs:CG1856-RD" - - - - -	16372	27,556,352 – 27,556,444	+	6	95	87.92	-1.29	0.91	0.625213
10280	3R_DroMel_CAF1	27,557,225 – 27,557,334	- - - - - - - - -	16373	27,557,225 – 27,557,334	+	4	111	74.96	-2.35	0.53	0.950858
10281	3R_DroMel_CAF1	27,558,489 – 27,558,581	- - - - - - - - -	16374	27,558,489 – 27,558,581	+	4	112	79.27	-1.56	0.81	0.728711
10282	3R_DroMel_CAF1	27,563,761 – 27,563,966	- - - - - - - - -	16375	27,563,761 – 27,563,863	+	3	117	59.69	-1.81	0.50	0.969736
				16376	27,563,823 – 27,563,938	+	3	116	75.53	-1.54	0.69	0.833559
				16377	27,563,863 – 27,563,966	+	3	104	78.15	-1.53	0.64	0.500000
10283	3R_DroMel_CAF1	27,565,056 – 27,565,164	- - - - - - - - -	16378	27,565,056 – 27,565,164	+	5	109	88.98	-1.37	0.84	0.578981
10284	3R_DroMel_CAF1	27,565,908 – 27,566,002	- - - - - - - - -	16379	27,565,908 – 27,566,002	+	5	94	95.74	-1.32	0.92	0.837767
10285	3R_DroMel_CAF1	27,569,470 – 27,569,577	- - - "knownCDS=Parent=FBtr0085836;Name=CG1890-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1890-RA" - - - - -	16380	27,569,470 – 27,569,577	+	6	120	69.82	-2.00	0.37	0.833208
10286	3R_DroMel_CAF1	27,569,750 – 27,569,851	- - - - - - - - -	16381	27,569,750 – 27,569,851	+	5	107	78.42	-1.49	0.67	0.541594
10287	3R_DroMel_CAF1	27,574,126 – 27,574,250	- - - - - - - - -	16382	27,574,126 – 27,574,219	-	6	94	82.69	-1.80	0.81	0.765157
10287	3R_DroMel_CAF1	27,574,126 – 27,574,250	- - - - - - - - -	16383	27,574,146 – 27,574,250	-	5	105	95.99	-2.98	0.83	0.995131
10288	3R_DroMel_CAF1	27,590,418 – 27,590,538	- - - - - - - - -	16384	27,590,418 – 27,590,538	+	3	120	97.22	-1.97	0.91	0.721358
10289	3R_DroMel_CAF1	27,592,599 – 27,592,719	- - - - - - - - -	16385	27,592,599 – 27,592,719	+	3	120	91.67	-2.36	0.88	0.869731
10290	3R_DroMel_CAF1	27,593,659 – 27,593,754	- - - - - - - - -	16386	27,593,659 – 27,593,754	+	3	105	80.73	-1.80	0.75	0.808815
10291	3R_DroMel_CAF1	27,594,344 – 27,594,463	- - - - - - - - -	16387	27,594,344 – 27,594,463	-	4	120	93.45	-1.83	0.83	0.730320
10292	3R_DroMel_CAF1	27,594,663 – 27,594,783	- - - - - - - - -	16388	27,594,663 – 27,594,783	+	4	120	94.44	-1.99	0.86	0.851247
10293	3R_DroMel_CAF1	27,596,585 – 27,596,698	- - - "knownCDS=Parent=FBtr0085858;Name=CG2135-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2135-RA" - - - - -	16389	27,596,585 – 27,596,698	-	6	117	81.87	-2.09	0.68	0.773228
10294	3R_DroMel_CAF1	27,597,862 – 27,597,998	- - - - - - - - -	16390	27,597,862 – 27,597,965	+	5	103	91.84	-1.69	0.92	0.984377
10294	3R_DroMel_CAF1	27,597,862 – 27,597,998	- - - - - - - - -	16391	27,597,885 – 27,597,998	+	5	113	95.22	-1.03	1.00	0.626720
10295	3R_DroMel_CAF1	27,601,334 – 27,601,435	- - - "knownCDS=Parent=FBtr0085857;Name=CG2126-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2126-RA" - - - - -	16392	27,601,334 – 27,601,435	-	6	107	77.66	-1.57	0.58	0.610080
10296	3R_DroMel_CAF1	27,601,598 – 27,601,769	- - - - - - - - -	16393	27,601,598 – 27,601,697	-	6	110	72.31	-1.53	0.55	0.702217
10296	3R_DroMel_CAF1	27,601,598 – 27,601,769	- - - - - - - - -	16394	27,601,667 – 27,601,769	+	6	102	81.88	-1.69	0.82	0.776316
10297	3R_DroMel_CAF1	27,606,467 – 27,606,564	- - - - - - - - -	16395	27,606,467 – 27,606,564	-	6	102	78.10	-1.78	0.73	0.930461
10298	3R_DroMel_CAF1	27,608,599 – 27,608,698	- - - - - - - - -	16396	27,608,599 – 27,608,698	+	6	113	73.87	-1.71	0.50	0.665193
10298	3R_DroMel_CAF1	27,608,599 – 27,608,698	- - - - - - - - -	16397	27,608,599 – 27,608,698	-	6	113	73.87	-1.95	0.52	0.901326
10299	3R_DroMel_CAF1	27,612,964 – 27,613,084	- - - "knownCDS=Parent=FBtr0085843;Name=faf-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1945-RA" - - - - -	16398	27,612,964 – 27,613,084	+	6	120	82.50	-1.61	0.66	0.521188
10300	3R_DroMel_CAF1	27,615,894 – 27,615,998	- - - - - - - - -	16399	27,615,894 – 27,615,998	-	6	104	93.50	-2.38	0.82	0.794795
10301	3R_DroMel_CAF1	27,619,349 – 27,619,442	- - - - - - - - -	16400	27,619,349 – 27,619,442	+	5	106	74.34	-1.90	0.27	0.853594
10301	3R_DroMel_CAF1	27,619,349 – 27,619,442	- - - - - - - - -	16401	27,619,349 – 27,619,442	-	5	106	74.34	-1.75	0.26	0.705432
10302	3R_DroMel_CAF1	27,620,379 – 27,620,470	- - - - - - - - -	16402	27,620,379 – 27,620,470	+	5	91	94.89	-3.00	0.85	0.999207
10303	3R_DroMel_CAF1	27,624,936 – 27,625,055	- - - "knownCDS=Parent=FBtr0085845;Name=Acf1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1966-RA" - - - - -	16403	27,624,936 – 27,625,055	+	6	119	78.66	-2.42	0.46	0.792629
10303	3R_DroMel_CAF1	27,624,936 – 27,625,055		16404	27,624,936 – 27,625,055	-	6	119	78.66	-2.11	0.58	0.878480
10304	3R_DroMel_CAF1	27,626,772 – 27,626,886	- - - "knownCDS=Parent=FBtr0085846;Name=CG11575-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11575-RA" - - - - -	16405	27,626,772 – 27,626,886	+	6	117	74.42	-1.84	0.44	0.523469
10305	3R_DroMel_CAF1	27,629,025 – 27,629,134	- - - "knownCDS=Parent=FBtr0085853;Name=CG2112-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2112-RA" - - - - -	16406	27,629,025 – 27,629,134	-	6	109	79.27	-1.34	0.72	0.736476
10306	3R_DroMel_CAF1	27,636,081 – 27,636,194	- - - - - - - - -	16407	27,636,081 – 27,636,194	+	3	113	95.27	-2.15	0.91	0.832768
10307	3R_DroMel_CAF1	27,640,943 – 27,641,053	- - - - - - - - -	16408	27,640,943 – 27,641,053	+	4	120	84.53	-1.85	0.76	0.811038
10307	3R_DroMel_CAF1	27,640,943 – 27,641,053	- - - - - - - - -	16409	27,640,943 – 27,641,053	-	4	120	84.53	-1.75	0.75	0.742147
10308	3R_DroMel_CAF1	27,642,208 – 27,642,325	- - - - - - - - -	16410	27,642,208 – 27,642,325	+	5	120	76.17	-1.65	0.60	0.623562
10309	3R_DroMel_CAF1	27,646,122 – 27,646,212	- - - - - - - - -	16411	27,646,122 – 27,646,212	-	6	103	76.52	-1.77	0.62	0.890503
10310	3R_DroMel_CAF1	27,648,053 – 27,648,156	- - - - - - - - -	16412	27,648,053 – 27,648,156	+	5	111	88.08	-1.64	0.78	0.679356
10311	3R_DroMel_CAF1	27,649,266 – 27,649,361	- - - - - - - - -	16413	27,649,266 – 27,649,361	+	6	100	83.17	-2.22	0.63	0.574853
10311	3R_DroMel_CAF1	27,649,266 – 27,649,361	- - - - - - - - -	16414	27,649,266 – 27,649,361	-	6	100	83.17	-2.06	0.69	0.639130
10312	3R_DroMel_CAF1	27,655,111 – 27,655,201	- - - - - - - - -	16415	27,655,111 – 27,655,201	-	6	94	81.24	-1.57	0.66	0.609443
10313	3R_DroMel_CAF1	27,660,754 – 27,660,859	- - - "knownCDS=Parent=FBtr0085869;Name=RhoGAP100F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1976-RA" - - - - -	16416	27,660,754 – 27,660,859	+	6	120	72.99	-1.67	0.48	0.561147
10314	3R_DroMel_CAF1	27,666,733 – 27,666,838	- - - "knownCDS=Parent=FBtr0085869;Name=RhoGAP100F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1976-RA" - - - - -	16417	27,666,733 – 27,666,838	+	6	117	79.45	-1.97	0.60	0.817883
10315	3R_DroMel_CAF1	27,677,687 – 27,677,936	- - - "knownCDS=Parent=FBtr0085878, FBtr0085879, FBtr0085880, FBtr0085882, FBtr0085883, FBtr0085888;Name=heph-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31000-RB, FlyBase+Annotation+IDs:CG31000-RA, FlyBase+Annotation+IDs:CG31000-RC, FlyBase+Annotation+IDs:CG31000-RD, FlyBase+Annotation+IDs:CG31000-RE, FlyBase+Annotation+IDs:CG31000-RF" - - - - -	16418	27,677,687 – 27,677,786	-	4	107	69.21	-1.23	0.72	0.847632
				16419	27,677,786 – 27,677,902	+	6	117	78.52	-1.10	0.81	0.711760
				16420	27,677,822 – 27,677,936	+	6	117	78.72	-2.10	0.69	0.939538
				16421	27,677,822 – 27,677,936	-	6	117	78.72	-1.54	0.59	0.541431
10316	3R_DroMel_CAF1	27,682,649 – 27,682,745	- - - - - - - - -	16422	27,682,649 – 27,682,745	-	6	96	91.04	-1.87	0.82	0.564773
10317	3R_DroMel_CAF1	27,696,240 – 27,696,378	- - - - - - - - -	16423	27,696,240 – 27,696,344	+	5	109	78.44	-1.93	0.59	0.802185
				16424	27,696,240 – 27,696,344	-	5	109	78.44	-1.61	0.63	0.562534
				16425	27,696,274 – 27,696,378	+	5	115	73.55	-2.01	0.35	0.906117
10318	3R_DroMel_CAF1	27,696,488 – 27,696,585	- - - - - - - - -	16426	27,696,488 – 27,696,585	-	4	98	92.84	-2.33	0.84	0.932597
10319	3R_DroMel_CAF1	27,706,993 – 27,707,085	- - - - - - - - -	16427	27,706,993 – 27,707,085	+	6	103	79.49	-1.81	0.54	0.519224
10320	3R_DroMel_CAF1	27,707,462 – 27,707,581	- - - "knownCDS=Parent=FBtr0085878, FBtr0085879, FBtr0085880, FBtr0085882, FBtr0085883, FBtr0085888;Name=heph-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31000-RB, FlyBase+Annotation+IDs:CG31000-RA, FlyBase+Annotation+IDs:CG31000-RC, FlyBase+Annotation+IDs:CG31000-RD, FlyBase+Annotation+IDs:CG31000-RE, FlyBase+Annotation+IDs:CG31000-RF" - - - - -	16428	27,707,462 – 27,707,581	+	6	120	92.39	-1.33	0.88	0.585648
10321	3R_DroMel_CAF1	27,712,111 – 27,712,234	- - - - - - - - -	16429	27,712,111 – 27,712,205	+	6	101	85.61	-1.71	0.82	0.598645
10321	3R_DroMel_CAF1	27,712,111 – 27,712,234	- - - - - - - - -	16430	27,712,137 – 27,712,234	+	6	99	87.46	-2.16	0.84	0.831731
10322	3R_DroMel_CAF1	27,713,224 – 27,713,320	- - - - - - - - -	16431	27,713,224 – 27,713,320	-	3	101	83.45	-1.89	0.74	0.693434
10323	3R_DroMel_CAF1	27,723,813 – 27,723,922	- - - - - - - - -	16432	27,723,813 – 27,723,922	+	6	120	84.18	-2.68	0.74	0.794849
10323	3R_DroMel_CAF1	27,723,813 – 27,723,922	- - - - - - - - -	16433	27,723,813 – 27,723,922	-	6	120	84.18	-3.96	0.78	0.959097
10324	3R_DroMel_CAF1	27,724,379 – 27,724,469	- - - - - - - - -	16434	27,724,379 – 27,724,469	+	6	97	76.93	-2.05	0.45	0.609686
10325	3R_DroMel_CAF1	27,728,566 – 27,728,674	- - - - - - - - -	16435	27,728,566 – 27,728,661	-	6	120	82.29	-1.37	0.76	0.560978
10325	3R_DroMel_CAF1	27,728,566 – 27,728,674	- - - - - - - - -	16436	27,728,581 – 27,728,674	-	6	120	86.27	-1.72	0.85	0.686255
10326	3R_DroMel_CAF1	27,729,657 – 27,729,752	- - - - - - - - -	16437	27,729,657 – 27,729,752	+	6	101	76.61	-1.77	0.56	0.747167
10327	3R_DroMel_CAF1	27,733,361 – 27,733,451	- - - - - - - - -	16438	27,733,361 – 27,733,451	+	6	100	88.90	-2.68	0.77	0.608413
10328	3R_DroMel_CAF1	27,750,714 – 27,750,808	- - - - - - - - -	16439	27,750,714 – 27,750,808	-	6	106	82.83	-1.68	0.69	0.565453
10329	3R_DroMel_CAF1	27,753,461 – 27,753,556	- - - - - - - - -	16440	27,753,461 – 27,753,556	+	4	103	86.42	-2.46	0.91	0.989419
10329	3R_DroMel_CAF1	27,753,461 – 27,753,556	- - - - - - - - -	16441	27,753,461 – 27,753,556	-	4	103	86.42	-2.87	0.72	0.963968
10330	3R_DroMel_CAF1	27,757,769 – 27,757,911	- - - "knownCDS=Parent=FBtr0085881;Name=heph-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31000-RH" - - - - -	16442	27,757,769 – 27,757,871	+	6	120	77.73	-3.08	0.59	0.990968
10330	3R_DroMel_CAF1	27,757,769 – 27,757,911		16443	27,757,809 – 27,757,911	+	6	120	73.51	-1.93	0.53	0.919256
10331	3R_DroMel_CAF1	27,764,821 – 27,764,915	- - - - - - - - -	16444	27,764,821 – 27,764,915	+	5	94	95.32	-1.81	0.89	0.983109
10332	3R_DroMel_CAF1	27,766,020 – 27,766,160	- - - - - - - - -	16445	27,766,020 – 27,766,134	-	5	120	88.72	-1.89	0.79	0.873712
10332	3R_DroMel_CAF1	27,766,020 – 27,766,160	- - - - - - - - -	16446	27,766,060 – 27,766,160	-	5	106	86.52	-2.03	0.63	0.500000
10333	3R_DroMel_CAF1	27,773,650 – 27,773,752	- - - - - - - - -	16447	27,773,650 – 27,773,752	-	5	102	95.29	-1.21	0.87	0.500000
10334	3R_DroMel_CAF1	27,777,482 – 27,777,574	- - - - - - - - -	16448	27,777,482 – 27,777,574	-	5	92	92.83	-1.60	0.82	0.816222
10335	3R_DroMel_CAF1	27,784,765 – 27,784,863	- - - "knownCDS=Parent=FBtr0085887;Name=heph-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31000-RG" - - - - -	16449	27,784,765 – 27,784,863	+	6	110	79.26	-1.88	0.65	0.865473
10336	3R_DroMel_CAF1	27,787,639 – 27,787,734	- - - - - - - - -	16450	27,787,639 – 27,787,734	+	5	106	83.01	-1.84	0.66	0.645676
10336	3R_DroMel_CAF1	27,787,639 – 27,787,734	- - - - - - - - -	16451	27,787,639 – 27,787,734	-	5	106	83.01	-1.70	0.64	0.514320
10337	3R_DroMel_CAF1	27,805,850 – 27,805,970	- - - - - - - - -	16452	27,805,850 – 27,805,970	+	3	120	84.01	-1.42	0.84	0.550495
10338	3R_DroMel_CAF1	27,807,865 – 27,807,979	- - - "knownCDS=Parent=FBtr0085872;Name=CG31001-cds, ;Dbxref=FlyBase+Annotation+IDs:CG31001-RA" - - - - -	16453	27,807,865 – 27,807,979	+	3	114	82.04	-1.01	0.87	0.562211
10339	3R_DroMel_CAF1	27,815,565 – 27,815,685	- - - "knownCDS=Parent=FBtr0085870, FBtr0085871;Name=CG2003-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2003-RA, FlyBase+Annotation+IDs:CG2003-RB" - - - - -	16454	27,815,565 – 27,815,685	+	6	120	81.33	-1.80	0.59	0.525690
10339	3R_DroMel_CAF1	27,815,565 – 27,815,685		16455	27,815,565 – 27,815,685	-	6	120	81.33	-2.33	0.66	0.849921
10340	3R_DroMel_CAF1	27,818,938 – 27,819,049	- - - - - - - - -	16456	27,818,938 – 27,819,049	-	5	119	74.63	-1.80	0.35	0.643805
10341	3R_DroMel_CAF1	27,823,536 – 27,823,627	- - - - - - - - -	16457	27,823,536 – 27,823,627	+	5	91	90.99	-1.57	0.85	0.866783
10341	3R_DroMel_CAF1	27,823,536 – 27,823,627	- - - - - - - - -	16458	27,823,536 – 27,823,627	-	5	91	90.99	-3.44	0.84	0.999586
10342	3R_DroMel_CAF1	27,836,834 – 27,836,930	- - - - - - - - -	16459	27,836,834 – 27,836,930	+	6	109	77.36	-1.47	0.58	0.518758
10343	3R_DroMel_CAF1	27,839,076 – 27,839,167	- - - - - - - - -	16460	27,839,076 – 27,839,167	+	5	93	74.66	-1.98	0.59	0.937971
10344	3R_DroMel_CAF1	27,851,128 – 27,851,225	- - - - - - - - -	16461	27,851,128 – 27,851,225	-	6	103	82.92	-2.65	0.63	0.731715
10345	3R_DroMel_CAF1	27,859,725 – 27,859,885	- - - - - - - - -	16462	27,859,725 – 27,859,845	-	5	120	94.50	-1.64	0.78	0.561599
10345	3R_DroMel_CAF1	27,859,725 – 27,859,885	- - - - - - - - -	16463	27,859,765 – 27,859,885	+	5	120	96.83	-2.18	0.91	0.998006
10346	3R_DroMel_CAF1	27,860,759 – 27,860,866	- - - - - - - - -	16464	27,860,759 – 27,860,850	+	5	91	93.96	-1.60	0.84	0.879684
				16465	27,860,759 – 27,860,850	-	5	91	93.96	-2.04	0.85	0.987040
				16466	27,860,770 – 27,860,866	+	5	96	93.23	-1.96	0.89	0.994882
				16467	27,860,770 – 27,860,866	-	5	96	93.23	-2.05	0.83	0.978551
10347	3R_DroMel_CAF1	27,861,710 – 27,861,830	- - - - - - - - -	16468	27,861,710 – 27,861,830	+	5	120	97.67	-1.36	0.93	0.790833
10348	3R_DroMel_CAF1	27,862,271 – 27,862,430	- - - - - - - - -	16469	27,862,271 – 27,862,390	+	5	120	96.99	-3.12	0.87	0.999047
				16470	27,862,271 – 27,862,390	-	5	120	96.99	-4.15	0.90	0.999722
				16471	27,862,310 – 27,862,430	+	5	120	97.83	-2.45	0.92	0.998946
				16472	27,862,310 – 27,862,430	-	5	120	97.83	-2.69	0.93	0.999536
10349	3R_DroMel_CAF1	27,867,180 – 27,867,273	- - - - - - - - -	16473	27,867,180 – 27,867,273	+	6	99	78.79	-1.77	0.53	0.500000
10350	3R_DroMel_CAF1	27,869,220 – 27,869,329	- - - - - - - - -	16474	27,869,220 – 27,869,329	+	6	109	79.11	-1.94	0.69	0.911104
10351	3R_DroMel_CAF1	27,880,388 – 27,880,478	- - - "knownCDS=Parent=FBtr0085874;Name=mod-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2050-RA" - - - - -	16475	27,880,388 – 27,880,478	+	5	91	72.42	-1.74	0.75	0.987174
10351	3R_DroMel_CAF1	27,880,388 – 27,880,478		16476	27,880,388 – 27,880,478	-	5	91	72.42	-1.60	0.57	0.639897

Generated by rnazIndex.pl (part of RNAz 1.0) on Thu Dec 14 20:14:13 2006