| Sequence ID | 3R_DroMel_CAF1 |
|---|---|
| Location | 7,605,369 – 7,605,489 |
| Length | 120 |
| Max. P | 0.664496 |
| Location | 7,605,369 – 7,605,489 |
|---|---|
| Length | 120 |
| Sequences | 3 |
| Columns | 120 |
| Reading direction | reverse |
| Mean pairwise identity | 100.00 |
| Mean single sequence MFE | -23.20 |
| Consensus MFE | -23.20 |
| Energy contribution | -23.20 |
| Covariance contribution | -0.00 |
| Combinations/Pair | 1.00 |
| Mean z-score | -1.50 |
| Structure conservation index | 1.00 |
| SVM decision value | 0.28 |
| SVM RNA-class probability | 0.664496 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>3R_DroMel_CAF1 7605369 120 - 27905053 ACAUAUUCACAUGUAAACGUAUAAGUGCACAGCCAUACCACACAACCCCAAAAAGUUGGAAAACCAAAUAAAAAUACAAGGCGCAUUGUAUGUGCGUUUUUCUUGUGGACACUCUACGUC .....((((((...((((((((((((((...(((........((((........))))(.....)..............))))))))...)))))))))....))))))........... ( -23.20) >DroSec_CAF1 785 120 - 1 ACAUAUUCACAUGUAAACGUAUAAGUGCACAGCCAUACCACACAACCCCAAAAAGUUGGAAAACCAAAUAAAAAUACAAGGCGCAUUGUAUGUGCGUUUUUCUUGUGGACACUCUACGUC .....((((((...((((((((((((((...(((........((((........))))(.....)..............))))))))...)))))))))....))))))........... ( -23.20) >DroSim_CAF1 786 120 - 1 ACAUAUUCACAUGUAAACGUAUAAGUGCACAGCCAUACCACACAACCCCAAAAAGUUGGAAAACCAAAUAAAAAUACAAGGCGCAUUGUAUGUGCGUUUUUCUUGUGGACACUCUACGUC .....((((((...((((((((((((((...(((........((((........))))(.....)..............))))))))...)))))))))....))))))........... ( -23.20) >consensus ACAUAUUCACAUGUAAACGUAUAAGUGCACAGCCAUACCACACAACCCCAAAAAGUUGGAAAACCAAAUAAAAAUACAAGGCGCAUUGUAUGUGCGUUUUUCUUGUGGACACUCUACGUC .....((((((...((((((((((((((...(((........((((........))))(.....)..............))))))))...)))))))))....))))))........... (-23.20 = -23.20 + -0.00)
Generated by rnazCluster.pl (part of RNAz 1.0) on Mon Dec 4 10:45:49 2006