| Sequence ID | 3R_DroMel_CAF1 |
|---|---|
| Location | 24,804,937 – 24,805,031 |
| Length | 94 |
| Max. P | 0.687548 |
| Location | 24,804,937 – 24,805,031 |
|---|---|
| Length | 94 |
| Sequences | 3 |
| Columns | 94 |
| Reading direction | reverse |
| Mean pairwise identity | 97.16 |
| Mean single sequence MFE | -21.40 |
| Consensus MFE | -20.80 |
| Energy contribution | -20.80 |
| Covariance contribution | 0.00 |
| Combinations/Pair | 1.00 |
| Mean z-score | -1.63 |
| Structure conservation index | 0.97 |
| SVM decision value | 0.32 |
| SVM RNA-class probability | 0.687548 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>3R_DroMel_CAF1 24804937 94 - 27905053 CGAUGGAUAACCAAGGAAAAGGGAGCUGUGAAAAAUCCUGGUCGAGAAGGGACCGAAAACGAAAAGGCCAGGAAAUUCGGUUGUGUGGGUUGAU (((((.((((((.......((....))..(((...((((((((.....(..........).....))))))))..))))))))).)..)))).. ( -22.00) >DroSec_CAF1 21210 94 - 1 CGAUGGAUAACCAUGGAAAAGGGAGCUGUGAAAAAUCCUGGUCGAGAAGGGACCGAAAACGAAAAGGCCAGGAAAUUCGGUUGUGAGGGGCGAU ((.(..((((((.......((....))..(((...((((((((.....(..........).....))))))))..)))))))))..)...)).. ( -21.40) >DroSim_CAF1 21624 94 - 1 CGAUGGAUAACCAUGGAAAAGGGAGCUGUGAAAAAUCCUGGUCGAGAAGGGACCGAAAACGAAAAGGCCAGGAAAUUCGGUUGUGAGGGGUGAU ......((((((.......((....))..(((...((((((((.....(..........).....))))))))..))))))))).......... ( -20.80) >consensus CGAUGGAUAACCAUGGAAAAGGGAGCUGUGAAAAAUCCUGGUCGAGAAGGGACCGAAAACGAAAAGGCCAGGAAAUUCGGUUGUGAGGGGUGAU ......((((((.......((....))..(((...((((((((.....(..........).....))))))))..))))))))).......... (-20.80 = -20.80 + 0.00)
Generated by rnazCluster.pl (part of RNAz 1.0) on Mon Dec 4 13:32:05 2006