chromosome 2R

Locus ID	Seq. ID	Location	Custom annotation	Window ID	Location	Strand	N	Length	Mean pairwise ID	z	SCI	P
1	2R_DroMel_CAF1	687,371 – 687,501	- - - - - - - - -	1	687,371 – 687,464	+	3	95	74.20	-1.09	0.77	0.659709
				2	687,371 – 687,464	-	3	95	74.20	-1.98	0.66	0.988244
				3	687,386 – 687,501	-	3	117	82.23	-2.29	0.61	0.713077
2	2R_DroMel_CAF1	691,979 – 692,070	- - - "knownCDS=Parent=FBtr0091528;Name=Nipped-A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33554-RA" - - - - -	4	691,979 – 692,070	+	6	112	76.41	-2.01	0.59	0.933739
3	2R_DroMel_CAF1	724,352 – 724,452	- - - - - - - - -	5	724,352 – 724,452	+	3	120	81.94	-1.69	0.74	0.648094
4	2R_DroMel_CAF1	802,520 – 802,690	- - - "knownCDS=Parent=FBtr0086082, FBtr0086083;Name=d4-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2682-RA, FlyBase+Annotation+IDs:CG2682-RC" - - - - -	6	802,520 – 802,619	+	6	105	74.98	-2.03	0.56	0.938652
				7	802,520 – 802,619	-	6	105	74.98	-1.71	0.51	0.631361
				8	802,554 – 802,650	+	6	99	76.70	-3.77	0.58	0.996931
				9	802,554 – 802,650	-	6	99	76.70	-3.95	0.56	0.997378
				10	802,579 – 802,690	+	6	114	77.16	-3.05	0.63	0.992342
				11	802,579 – 802,690	-	6	114	77.16	-2.62	0.57	0.982247
5	2R_DroMel_CAF1	835,317 – 835,432	- - - "knownCDS=Parent=FBtr0086084, FBtr0086086, FBtr0086085;Name=Ogt-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10392-RB, FlyBase+Annotation+IDs:CG10392-RC, FlyBase+Annotation+IDs:CG10392-RA" - - - - -	12	835,317 – 835,432	-	6	115	75.77	-2.30	0.73	0.986762
6	2R_DroMel_CAF1	847,442 – 847,602	- - - "knownCDS=Parent=FBtr0086094;Name=CG10465-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10465-RA" - - - - -	13	847,442 – 847,562	-	4	120	86.53	-1.51	0.71	0.561727
				14	847,482 – 847,602	+	4	120	86.39	-1.65	0.72	0.649255
				15	847,482 – 847,602	-	4	120	86.39	-1.89	0.78	0.833083
7	2R_DroMel_CAF1	847,722 – 847,842	- - - "knownCDS=Parent=FBtr0086094;Name=CG10465-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10465-RA" - - - - -	16	847,722 – 847,842	+	4	120	85.69	-1.58	0.71	0.605732
8	2R_DroMel_CAF1	858,621 – 858,735	- - - "knownCDS=Parent=FBtr0086088;Name=CG10395-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10395-RB" - - - - -	17	858,621 – 858,735	+	6	120	81.24	-2.40	0.52	0.640161
8	2R_DroMel_CAF1	858,621 – 858,735		18	858,621 – 858,735	-	6	120	81.24	-2.26	0.54	0.613110
9	2R_DroMel_CAF1	869,419 – 869,530	- - - "knownCDS=Parent=FBtr0086091, FBtr0086092;Name=CG10417-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10417-RA, FlyBase+Annotation+IDs:CG10417-RB" - - - - -	19	869,419 – 869,530	+	6	120	76.75	-3.31	0.52	0.996101
9	2R_DroMel_CAF1	869,419 – 869,530		20	869,419 – 869,530	-	6	120	76.75	-2.86	0.61	0.992093
10	2R_DroMel_CAF1	870,010 – 870,128	- - - "knownCDS=Parent=FBtr0086091, FBtr0086092;Name=CG10417-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10417-RA, FlyBase+Annotation+IDs:CG10417-RB" - - - - -	21	870,010 – 870,128	+	6	120	79.89	-2.09	0.57	0.773689
10	2R_DroMel_CAF1	870,010 – 870,128		22	870,010 – 870,128	-	6	120	79.89	-2.46	0.53	0.849891
11	2R_DroMel_CAF1	943,455 – 943,575	- - - "knownCDS=Parent=FBtr0086064;Name=CG30437-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30437-RB" - - - - -	23	943,455 – 943,575	-	3	120	96.11	-2.10	0.85	0.585279
12	2R_DroMel_CAF1	948,206 – 948,326	- - - - - - - - -	24	948,206 – 948,326	+	3	120	95.28	-1.26	1.00	0.508487
12	2R_DroMel_CAF1	948,206 – 948,326	- - - - - - - - -	25	948,206 – 948,326	-	3	120	95.28	-2.32	0.88	0.819036
13	2R_DroMel_CAF1	1,004,012 – 1,004,131	- - - - - - - - -	26	1,004,012 – 1,004,131	+	4	120	76.71	-1.91	0.59	0.756868
14	2R_DroMel_CAF1	1,013,892 – 1,014,012	- - - "knownCDS=Parent=FBtr0086075;Name=TpnC4-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12408-RA" - - - - -	27	1,013,892 – 1,014,012	+	6	120	79.83	-1.79	0.68	0.840199
15	2R_DroMel_CAF1	1,026,734 – 1,026,921	- - - - - - - - -	28	1,026,734 – 1,026,848	+	4	120	85.57	-1.76	0.68	0.671220
				29	1,026,774 – 1,026,888	+	4	120	84.31	-1.54	0.66	0.516899
				30	1,026,814 – 1,026,921	+	4	120	82.91	-1.66	0.63	0.500000
16	2R_DroMel_CAF1	1,026,992 – 1,027,097	- - - - - - - - -	31	1,026,992 – 1,027,097	+	3	105	93.33	-1.72	0.94	0.713295
16	2R_DroMel_CAF1	1,026,992 – 1,027,097	- - - - - - - - -	32	1,026,992 – 1,027,097	-	3	105	93.33	-2.09	0.81	0.508776
17	2R_DroMel_CAF1	1,028,329 – 1,028,448	- - - - - - - - -	33	1,028,329 – 1,028,448	+	3	119	89.86	-1.84	0.84	0.572238
17	2R_DroMel_CAF1	1,028,329 – 1,028,448	- - - - - - - - -	34	1,028,329 – 1,028,448	-	3	119	89.86	-1.97	0.94	0.913752
18	2R_DroMel_CAF1	1,034,471 – 1,034,591	- - - - - - - - -	35	1,034,471 – 1,034,591	+	3	120	98.33	-2.11	0.98	0.919028
19	2R_DroMel_CAF1	1,116,478 – 1,116,598	- - - "knownCDS=Parent=FBtr0086071;Name=CG17508-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17508-RA" - - - - -	36	1,116,478 – 1,116,598	-	3	120	98.89	-1.85	0.98	0.833686
20	2R_DroMel_CAF1	1,151,938 – 1,152,089	- - - - - - - - -	37	1,151,938 – 1,152,050	+	3	120	70.85	-1.98	0.51	0.811520
				38	1,151,938 – 1,152,050	-	3	120	70.85	-3.12	0.58	0.999971
				39	1,151,975 – 1,152,089	+	3	119	79.66	-2.82	0.58	0.950434
				40	1,151,975 – 1,152,089	-	3	119	79.66	-3.39	0.70	0.998843
21	2R_DroMel_CAF1	1,153,951 – 1,154,069	- - - - - - - - -	41	1,153,951 – 1,154,069	-	3	120	74.50	-1.69	0.57	0.551871
22	2R_DroMel_CAF1	1,156,082 – 1,156,185	- - - - - - - - -	42	1,156,082 – 1,156,185	+	5	120	79.21	-1.86	0.23	0.514283
23	2R_DroMel_CAF1	1,164,888 – 1,164,981	- - - "knownCDS=Parent=FBtr0086062;Name=l(2)NC136-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8426-RA" - - - - -	43	1,164,888 – 1,164,981	+	6	111	76.75	-1.36	0.66	0.742646
23	2R_DroMel_CAF1	1,164,888 – 1,164,981		44	1,164,888 – 1,164,981	-	6	111	76.75	-1.32	0.81	0.901542
24	2R_DroMel_CAF1	1,165,798 – 1,165,899	- - - - - - - - -	45	1,165,798 – 1,165,899	-	3	101	73.57	-1.33	0.72	0.833443
25	2R_DroMel_CAF1	1,193,801 – 1,193,904	- - - - - - - - -	46	1,193,801 – 1,193,904	+	5	103	90.19	-2.61	0.75	0.955032
26	2R_DroMel_CAF1	1,195,282 – 1,195,375	- - - "knownCDS=Parent=FBtr0086060, FBtr0086061;Name=scarface-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11066-RB, FlyBase+Annotation+IDs:CG11066-RA" - - - - -	47	1,195,282 – 1,195,375	+	6	93	80.43	-1.48	0.64	0.581683
26	2R_DroMel_CAF1	1,195,282 – 1,195,375		48	1,195,282 – 1,195,375	-	6	93	80.43	-1.58	0.63	0.604991
27	2R_DroMel_CAF1	1,195,660 – 1,195,750	- - - - - - - - -	49	1,195,660 – 1,195,750	-	4	91	92.08	-1.39	0.88	0.564684
28	2R_DroMel_CAF1	1,196,122 – 1,196,213	- - - - - - - - -	50	1,196,122 – 1,196,213	-	3	91	93.36	-2.10	0.84	0.614540
29	2R_DroMel_CAF1	1,198,697 – 1,198,797	- - - - - - - - -	51	1,198,697 – 1,198,797	-	6	120	76.04	-2.45	0.38	0.857229
30	2R_DroMel_CAF1	1,217,523 – 1,217,619	- - - - - - - - -	52	1,217,523 – 1,217,619	-	6	104	91.69	-1.84	0.91	0.974551
31	2R_DroMel_CAF1	1,221,367 – 1,221,463	- - - - - - - - -	53	1,221,367 – 1,221,463	-	4	99	77.60	-1.43	0.73	0.513381
32	2R_DroMel_CAF1	1,225,044 – 1,225,156	- - - "knownCDS=Parent=FBtr0086058;Name=ap-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8376-RA" - - - - -	54	1,225,044 – 1,225,156	+	6	112	97.56	-1.50	0.96	0.991815
32	2R_DroMel_CAF1	1,225,044 – 1,225,156		55	1,225,044 – 1,225,156	-	6	112	97.56	-2.88	0.97	0.999965
33	2R_DroMel_CAF1	1,243,772 – 1,243,948	- - - - - - - - -	56	1,243,772 – 1,243,880	+	3	120	78.01	-1.86	0.68	0.898145
				57	1,243,772 – 1,243,880	-	3	120	78.01	-2.10	0.72	0.975231
				58	1,243,812 – 1,243,920	+	3	120	90.20	-2.44	0.79	0.742217
				59	1,243,852 – 1,243,948	-	3	120	82.32	-1.21	0.84	0.521601
34	2R_DroMel_CAF1	1,244,028 – 1,244,148	- - - - - - - - -	60	1,244,028 – 1,244,148	+	4	120	93.33	-1.43	0.93	0.661264
34	2R_DroMel_CAF1	1,244,028 – 1,244,148	- - - - - - - - -	61	1,244,028 – 1,244,148	-	4	120	93.33	-1.81	0.83	0.740985
35	2R_DroMel_CAF1	1,249,100 – 1,249,212	- - - - - - - - -	62	1,249,100 – 1,249,212	-	4	120	90.37	-1.59	0.83	0.700616
36	2R_DroMel_CAF1	1,253,059 – 1,253,173	- - - - - - - - -	63	1,253,059 – 1,253,173	+	4	120	91.74	-1.91	0.82	0.816345
37	2R_DroMel_CAF1	1,255,159 – 1,255,289	- - - - - - - - -	64	1,255,159 – 1,255,264	+	5	105	93.14	-1.44	0.79	0.509377
37	2R_DroMel_CAF1	1,255,159 – 1,255,289	- - - - - - - - -	65	1,255,199 – 1,255,289	+	5	90	94.67	-1.41	0.87	0.795467
38	2R_DroMel_CAF1	1,255,618 – 1,255,753	- - - - - - - - -	66	1,255,618 – 1,255,720	+	5	104	88.68	-2.52	0.80	0.986037
				67	1,255,618 – 1,255,720	-	5	104	88.68	-2.56	0.80	0.987314
				68	1,255,655 – 1,255,753	+	5	100	89.54	-1.66	0.88	0.930488
				69	1,255,655 – 1,255,753	-	5	100	89.54	-2.13	0.80	0.956914
39	2R_DroMel_CAF1	1,256,507 – 1,256,638	- - - - - - - - -	70	1,256,507 – 1,256,603	-	5	98	94.42	-2.58	0.89	0.999561
39	2R_DroMel_CAF1	1,256,507 – 1,256,638	- - - - - - - - -	71	1,256,545 – 1,256,638	-	5	95	94.67	-2.80	0.85	0.998704
40	2R_DroMel_CAF1	1,256,666 – 1,256,813	- - - - - - - - -	72	1,256,666 – 1,256,781	+	5	115	96.00	-1.42	0.91	0.883927
				73	1,256,666 – 1,256,781	-	5	115	96.00	-1.64	0.89	0.945589
				74	1,256,706 – 1,256,813	+	5	107	97.76	-1.28	0.94	0.738722
41	2R_DroMel_CAF1	1,258,617 – 1,258,776	- - - - - - - - -	75	1,258,617 – 1,258,736	+	5	119	95.80	-1.42	0.89	0.834228
41	2R_DroMel_CAF1	1,258,617 – 1,258,776	- - - - - - - - -	76	1,258,657 – 1,258,776	+	5	119	96.97	-1.59	0.88	0.897915
42	2R_DroMel_CAF1	1,258,950 – 1,259,083	- - - - - - - - -	77	1,258,950 – 1,259,043	-	5	96	96.82	-2.99	0.89	0.999533
42	2R_DroMel_CAF1	1,258,950 – 1,259,083	- - - - - - - - -	78	1,258,990 – 1,259,083	-	5	96	93.62	-1.18	0.87	0.519929
43	2R_DroMel_CAF1	1,272,638 – 1,272,730	- - - - - - - - -	79	1,272,638 – 1,272,730	+	6	108	70.61	-1.00	0.77	0.913419
44	2R_DroMel_CAF1	1,290,896 – 1,291,014	- - - - - - - - -	80	1,290,896 – 1,291,014	+	4	120	84.85	-1.66	0.68	0.613456
45	2R_DroMel_CAF1	1,296,861 – 1,297,097	- - - - - - - - -	81	1,296,861 – 1,296,977	+	4	116	96.84	-2.14	0.98	0.941724
				82	1,296,861 – 1,296,977	-	4	116	96.84	-3.32	0.96	0.986227
				83	1,296,937 – 1,297,057	+	4	120	95.83	-2.32	0.91	0.948253
				84	1,296,937 – 1,297,057	-	4	120	95.83	-1.85	0.88	0.738967
				85	1,296,977 – 1,297,097	+	4	120	95.83	-2.02	0.89	0.857564
46	2R_DroMel_CAF1	1,297,457 – 1,297,576	- - - - - - - - -	86	1,297,457 – 1,297,576	+	4	120	72.34	-1.77	0.59	0.864136
47	2R_DroMel_CAF1	1,297,682 – 1,297,778	- - - - - - - - -	87	1,297,682 – 1,297,778	+	4	120	72.53	-1.75	0.56	0.705282
48	2R_DroMel_CAF1	1,302,795 – 1,302,915	- - - - - - - - -	88	1,302,795 – 1,302,915	+	4	120	71.43	-1.76	0.55	0.777384
49	2R_DroMel_CAF1	1,305,697 – 1,305,893	- - "RNAmicro=f:1305697_t:1305812_strand:-_p:0.644598" "knownCDS=Parent=FBtr0086051;Name=Or42b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12754-RA" - - - - -	89	1,305,697 – 1,305,813	+	4	116	95.40	-1.86	0.93	0.870141
				90	1,305,697 – 1,305,813	-	4	116	95.40	-3.76	0.96	0.992099
				91	1,305,773 – 1,305,893	+	4	120	96.67	-1.62	0.94	0.652737
50	2R_DroMel_CAF1	1,306,125 – 1,306,237	- - - - - - - - -	92	1,306,125 – 1,306,237	+	4	120	91.31	-1.91	0.75	0.651983
50	2R_DroMel_CAF1	1,306,125 – 1,306,237	- - - - - - - - -	93	1,306,125 – 1,306,237	-	4	120	91.31	-2.44	0.87	0.977377
51	2R_DroMel_CAF1	1,306,606 – 1,306,890	- - - - - - - - -	94	1,306,606 – 1,306,720	-	4	120	97.44	-1.68	0.93	0.607846
				95	1,306,646 – 1,306,736	-	4	120	83.17	-1.58	0.71	0.591342
				96	1,306,720 – 1,306,810	+	4	120	82.70	-2.10	0.62	0.762958
				97	1,306,720 – 1,306,810	-	4	120	82.70	-2.13	0.74	0.924221
				98	1,306,736 – 1,306,850	+	4	120	95.16	-1.77	0.91	0.815584
				99	1,306,736 – 1,306,850	-	4	120	95.16	-2.93	0.97	0.994509
				100	1,306,770 – 1,306,890	-	4	120	97.36	-1.95	0.96	0.857374
52	2R_DroMel_CAF1	1,308,119 – 1,308,258	- - - - - - - - -	101	1,308,119 – 1,308,239	+	4	120	97.92	-3.00	0.91	0.933746
52	2R_DroMel_CAF1	1,308,119 – 1,308,258	- - - - - - - - -	102	1,308,159 – 1,308,258	+	3	99	94.54	-2.76	0.87	0.912656
53	2R_DroMel_CAF1	1,308,416 – 1,308,536	- - - - - - - - -	103	1,308,416 – 1,308,536	+	4	120	92.92	-1.56	0.84	0.604993
54	2R_DroMel_CAF1	1,308,951 – 1,309,070	- - - - - - - - -	104	1,308,951 – 1,309,070	-	4	120	93.17	-1.57	0.87	0.666102
55	2R_DroMel_CAF1	1,309,994 – 1,310,091	- - - - - - - - -	105	1,309,994 – 1,310,091	-	3	97	73.88	-2.00	0.76	0.997967
56	2R_DroMel_CAF1	1,311,657 – 1,311,816	- - - - - - - - -	106	1,311,657 – 1,311,776	+	4	120	96.81	-1.54	0.99	0.656958
				107	1,311,657 – 1,311,776	-	4	120	96.81	-2.18	0.99	0.953216
				108	1,311,696 – 1,311,816	-	4	120	97.22	-2.37	0.97	0.960433
57	2R_DroMel_CAF1	1,311,924 – 1,312,044	- - - - - - - - -	109	1,311,924 – 1,312,044	-	3	120	92.50	-1.46	0.95	0.575552
58	2R_DroMel_CAF1	1,312,383 – 1,312,503	- - - - - - - - -	110	1,312,383 – 1,312,503	+	5	120	90.67	-1.72	0.84	0.917411
59	2R_DroMel_CAF1	1,314,429 – 1,314,540	- - - - - - - - -	111	1,314,429 – 1,314,540	-	4	111	87.39	-1.85	0.74	0.768131
60	2R_DroMel_CAF1	1,315,185 – 1,315,345	- - - - - - - - -	112	1,315,185 – 1,315,305	+	4	120	90.97	-1.41	0.83	0.537608
				113	1,315,185 – 1,315,305	-	4	120	90.97	-2.04	0.89	0.946711
				114	1,315,225 – 1,315,345	+	4	120	88.89	-1.36	0.80	0.500000
				115	1,315,225 – 1,315,345	-	4	120	88.89	-1.91	0.85	0.889912
61	2R_DroMel_CAF1	1,315,767 – 1,315,917	- - - - - - - - -	116	1,315,767 – 1,315,887	+	5	120	97.33	-1.26	0.89	0.547040
61	2R_DroMel_CAF1	1,315,767 – 1,315,917	- - - - - - - - -	117	1,315,807 – 1,315,917	+	5	120	91.45	-2.27	0.89	0.998592
62	2R_DroMel_CAF1	1,316,037 – 1,316,156	- - - - - - - - -	118	1,316,037 – 1,316,156	+	5	120	89.03	-2.17	0.68	0.586117
63	2R_DroMel_CAF1	1,318,700 – 1,318,820	- - - - - - - - -	119	1,318,700 – 1,318,820	+	4	120	89.58	-1.49	0.80	0.591227
64	2R_DroMel_CAF1	1,319,877 – 1,320,051	- - - - - - - - -	120	1,319,877 – 1,319,976	-	4	99	86.87	-2.53	0.75	0.950305
				121	1,319,896 – 1,320,016	+	5	120	92.98	-1.59	0.86	0.908029
				122	1,319,896 – 1,320,016	-	5	120	92.98	-2.32	0.83	0.992079
				123	1,319,936 – 1,320,051	+	5	120	90.97	-1.66	0.84	0.888186
65	2R_DroMel_CAF1	1,320,131 – 1,320,277	- - - - - - - - -	124	1,320,131 – 1,320,237	+	3	120	84.51	-2.24	0.86	0.929083
65	2R_DroMel_CAF1	1,320,131 – 1,320,277	- - - - - - - - -	125	1,320,166 – 1,320,277	+	5	120	88.00	-1.62	0.95	0.939216
66	2R_DroMel_CAF1	1,320,382 – 1,320,540	- - - - - - - - -	126	1,320,382 – 1,320,500	+	5	120	97.47	-1.22	0.91	0.556293
66	2R_DroMel_CAF1	1,320,382 – 1,320,540	- - - - - - - - -	127	1,320,420 – 1,320,540	-	5	120	97.67	-1.60	0.84	0.599453
67	2R_DroMel_CAF1	1,320,918 – 1,321,077	- - - - - - - - -	128	1,320,918 – 1,321,038	+	5	120	83.87	-1.76	0.72	0.672018
67	2R_DroMel_CAF1	1,320,918 – 1,321,077	- - - - - - - - -	129	1,320,958 – 1,321,077	+	5	120	91.63	-2.08	0.82	0.970403
68	2R_DroMel_CAF1	1,321,453 – 1,321,572	- - - - - - - - -	130	1,321,453 – 1,321,572	-	5	120	96.65	-2.10	0.81	0.866998
69	2R_DroMel_CAF1	1,322,524 – 1,322,631	- - - - - - - - -	131	1,322,524 – 1,322,631	+	5	120	89.12	-2.70	0.66	0.653966
69	2R_DroMel_CAF1	1,322,524 – 1,322,631	- - - - - - - - -	132	1,322,524 – 1,322,631	-	5	120	89.12	-2.17	0.78	0.934196
70	2R_DroMel_CAF1	1,323,012 – 1,323,212	- - - - - - - - -	133	1,323,012 – 1,323,132	+	5	120	88.94	-3.53	0.67	0.908858
				134	1,323,012 – 1,323,132	-	5	120	88.94	-2.66	0.67	0.726294
				135	1,323,052 – 1,323,172	+	5	120	95.92	-1.50	0.86	0.801644
				136	1,323,092 – 1,323,212	+	5	120	95.50	-1.39	0.85	0.634369
71	2R_DroMel_CAF1	1,324,191 – 1,324,391	- - - - - - - - -	137	1,324,191 – 1,324,311	-	5	120	96.75	-1.19	0.94	0.694176
71	2R_DroMel_CAF1	1,324,191 – 1,324,391	- - - - - - - - -	138	1,324,271 – 1,324,391	+	5	120	74.76	-1.99	0.54	0.908142
72	2R_DroMel_CAF1	1,325,374 – 1,325,677	- - - - - - - - -	139	1,325,374 – 1,325,484	+	5	120	72.86	-3.05	0.59	0.999736
				140	1,325,374 – 1,325,484	-	5	120	72.86	-2.23	0.57	0.988551
				141	1,325,414 – 1,325,524	+	5	120	88.66	-1.65	0.78	0.704364
				142	1,325,484 – 1,325,602	-	5	120	90.18	-1.52	0.80	0.684526
				143	1,325,524 – 1,325,642	+	5	120	89.32	-3.42	0.76	0.994804
				144	1,325,524 – 1,325,642	-	5	120	89.32	-3.42	0.75	0.992131
				145	1,325,562 – 1,325,677	+	5	120	83.80	-3.09	0.78	0.996199
				146	1,325,562 – 1,325,677	-	5	120	83.80	-2.35	0.71	0.931125
73	2R_DroMel_CAF1	1,327,732 – 1,327,852	- - - - - - - - -	147	1,327,732 – 1,327,852	+	5	120	93.08	-2.16	0.88	0.996858
74	2R_DroMel_CAF1	1,328,100 – 1,328,260	- - - - - - - - -	148	1,328,100 – 1,328,220	+	4	120	90.57	-1.66	0.81	0.696415
74	2R_DroMel_CAF1	1,328,100 – 1,328,260	- - - - - - - - -	149	1,328,140 – 1,328,260	+	5	120	81.67	-1.84	0.67	0.729359
75	2R_DroMel_CAF1	1,328,485 – 1,328,598	- - - - - - - - -	150	1,328,485 – 1,328,598	-	4	120	80.33	-1.64	0.69	0.622718
76	2R_DroMel_CAF1	1,328,999 – 1,329,228	- - - - - - - - -	151	1,328,999 – 1,329,114	-	4	120	66.53	-1.66	0.47	0.559335
76	2R_DroMel_CAF1	1,328,999 – 1,329,228	- - - - - - - - -	152	1,329,114 – 1,329,228	+	4	114	90.16	-2.27	0.79	0.910862
77	2R_DroMel_CAF1	1,330,414 – 1,330,567	- - - - - - - - -	153	1,330,414 – 1,330,534	+	4	120	86.53	-2.16	0.76	0.902480
				154	1,330,414 – 1,330,534	-	4	120	86.53	-2.16	0.69	0.817301
				155	1,330,454 – 1,330,567	+	4	120	86.27	-1.48	0.81	0.589732
				156	1,330,454 – 1,330,567	-	4	120	86.27	-1.65	0.78	0.702393
78	2R_DroMel_CAF1	1,331,240 – 1,331,428	- - - - - - - - -	157	1,331,240 – 1,331,360	+	4	120	98.06	-1.66	0.99	0.643393
				158	1,331,280 – 1,331,400	+	4	120	98.75	-1.87	0.99	0.737994
				159	1,331,280 – 1,331,400	-	4	120	98.75	-2.70	0.91	0.864879
				160	1,331,320 – 1,331,428	-	4	120	88.54	-2.07	0.78	0.871958
79	2R_DroMel_CAF1	1,331,628 – 1,331,748	- - - - - - - - -	161	1,331,628 – 1,331,748	+	4	120	85.03	-1.56	0.70	0.584731
80	2R_DroMel_CAF1	1,334,010 – 1,334,170	- - - - - - - - -	162	1,334,010 – 1,334,130	+	5	120	98.67	-1.17	0.96	0.500000
				163	1,334,010 – 1,334,130	-	5	120	98.67	-1.64	0.99	0.974704
				164	1,334,050 – 1,334,170	+	5	120	99.00	-1.61	0.97	0.950361
				165	1,334,050 – 1,334,170	-	5	120	99.00	-1.34	0.94	0.687524
81	2R_DroMel_CAF1	1,335,634 – 1,335,874	- - - - - - - - -	166	1,335,634 – 1,335,754	+	5	120	96.33	-1.91	0.97	0.998272
				167	1,335,634 – 1,335,754	-	5	120	96.33	-1.30	0.88	0.610884
				168	1,335,674 – 1,335,794	+	5	120	90.75	-2.24	0.78	0.946190
				169	1,335,754 – 1,335,874	-	4	120	88.23	-1.64	0.73	0.626312
82	2R_DroMel_CAF1	1,335,950 – 1,336,089	- - - - - - - - -	170	1,335,950 – 1,336,056	-	5	120	90.68	-1.49	0.79	0.595561
82	2R_DroMel_CAF1	1,335,950 – 1,336,089	- - - - - - - - -	171	1,335,976 – 1,336,089	-	5	120	90.40	-1.48	0.80	0.642878
83	2R_DroMel_CAF1	1,336,169 – 1,336,289	- - - - - - - - -	172	1,336,169 – 1,336,289	+	5	120	96.17	-2.05	0.93	0.998453
84	2R_DroMel_CAF1	1,336,751 – 1,336,902	- - - - - - - - -	173	1,336,751 – 1,336,862	+	5	120	84.72	-2.31	0.74	0.931091
84	2R_DroMel_CAF1	1,336,751 – 1,336,902	- - - - - - - - -	174	1,336,786 – 1,336,902	+	5	120	83.28	-1.82	0.74	0.749357
85	2R_DroMel_CAF1	1,337,750 – 1,337,866	- - - - - - - - -	175	1,337,750 – 1,337,866	+	5	120	88.58	-1.50	0.77	0.549439
86	2R_DroMel_CAF1	1,337,946 – 1,338,064	- - - - - - - - -	176	1,337,946 – 1,338,064	+	5	120	94.92	-1.11	0.90	0.506169
87	2R_DroMel_CAF1	1,338,132 – 1,338,240	- - - - - - - - -	177	1,338,132 – 1,338,240	-	4	120	84.42	-1.66	0.68	0.623711
88	2R_DroMel_CAF1	1,338,271 – 1,338,391	- - - - - - - - -	178	1,338,271 – 1,338,391	-	5	120	82.62	-1.99	0.66	0.777868
89	2R_DroMel_CAF1	1,338,505 – 1,338,620	- - - - - - - - -	179	1,338,505 – 1,338,620	+	5	120	80.60	-2.35	0.55	0.898642
89	2R_DroMel_CAF1	1,338,505 – 1,338,620	- - - - - - - - -	180	1,338,505 – 1,338,620	-	5	120	80.60	-1.88	0.56	0.581210
90	2R_DroMel_CAF1	1,340,582 – 1,340,870	- - - - - - - - -	181	1,340,582 – 1,340,672	+	3	90	93.33	-5.37	0.94	0.939403
				182	1,340,582 – 1,340,672	-	3	90	93.33	-3.69	0.88	0.966059
				183	1,340,611 – 1,340,710	+	4	120	86.15	-4.60	0.90	0.997394
				184	1,340,611 – 1,340,710	-	4	120	86.15	-4.13	0.91	0.998536
				185	1,340,632 – 1,340,750	-	4	120	87.96	-1.71	0.79	0.736207
				186	1,340,672 – 1,340,790	+	4	120	81.59	-2.43	0.65	0.955791
				187	1,340,672 – 1,340,790	-	4	120	81.59	-3.31	0.77	0.998948
				188	1,340,710 – 1,340,830	+	4	120	81.88	-1.93	0.68	0.802752
				189	1,340,710 – 1,340,830	-	4	120	81.88	-2.14	0.68	0.903349
				190	1,340,750 – 1,340,870	+	5	120	86.75	-2.19	0.74	0.877421
				191	1,340,750 – 1,340,870	-	5	120	86.75	-1.60	0.79	0.649185
91	2R_DroMel_CAF1	1,342,163 – 1,342,332	- - - - - - - - -	192	1,342,163 – 1,342,270	-	5	120	91.71	-1.56	0.91	0.957163
91	2R_DroMel_CAF1	1,342,163 – 1,342,332	- - - - - - - - -	193	1,342,232 – 1,342,332	-	5	120	89.07	-1.97	0.92	0.992828
92	2R_DroMel_CAF1	1,343,226 – 1,343,379	- - - - - - - - -	194	1,343,226 – 1,343,340	+	4	120	85.90	-2.54	0.65	0.865362
92	2R_DroMel_CAF1	1,343,226 – 1,343,379	- - - - - - - - -	195	1,343,266 – 1,343,379	+	5	120	88.86	-2.76	0.78	0.987137
93	2R_DroMel_CAF1	1,345,226 – 1,345,338	- - - - - - - - -	196	1,345,226 – 1,345,338	-	4	112	78.23	-1.72	0.86	0.927885
94	2R_DroMel_CAF1	1,345,476 – 1,345,596	- - - - - - - - -	197	1,345,476 – 1,345,596	+	5	120	92.56	-3.31	0.85	0.999741
95	2R_DroMel_CAF1	1,345,701 – 1,345,810	- - - - - - - - -	198	1,345,701 – 1,345,810	+	5	120	85.90	-1.74	0.79	0.744252
96	2R_DroMel_CAF1	1,345,928 – 1,346,305	- - - - - - - - -	199	1,345,928 – 1,346,035	+	5	120	91.35	-2.04	0.95	0.999013
				200	1,345,956 – 1,346,075	+	5	120	94.87	-1.49	0.87	0.857886
				201	1,345,995 – 1,346,114	+	5	119	94.63	-1.89	0.89	0.990487
				202	1,346,075 – 1,346,188	-	5	113	97.09	-1.84	0.98	0.997216
				203	1,346,114 – 1,346,225	-	5	114	94.83	-1.55	0.89	0.945025
				204	1,346,148 – 1,346,265	+	5	120	86.94	-2.08	0.76	0.874496
				205	1,346,148 – 1,346,265	-	5	120	86.94	-2.00	0.87	0.964054
				206	1,346,188 – 1,346,305	-	5	120	80.58	-1.52	0.71	0.549971
97	2R_DroMel_CAF1	1,346,575 – 1,346,695	- - - - - - - - -	207	1,346,575 – 1,346,695	+	4	120	89.87	-1.52	0.80	0.605475
98	2R_DroMel_CAF1	1,346,735 – 1,346,844	- - - - - - - - -	208	1,346,735 – 1,346,844	-	5	120	67.45	-1.98	0.33	0.779108
99	2R_DroMel_CAF1	1,346,884 – 1,346,982	- - - - - - - - -	209	1,346,884 – 1,346,982	-	5	116	91.44	-1.35	0.85	0.670619
100	2R_DroMel_CAF1	1,347,312 – 1,347,431	- - - - - - - - -	210	1,347,312 – 1,347,431	+	5	120	88.21	-3.03	0.81	0.997530
101	2R_DroMel_CAF1	1,347,653 – 1,347,803	- - - - - - - - -	211	1,347,653 – 1,347,770	-	4	120	86.52	-1.85	0.64	0.585475
101	2R_DroMel_CAF1	1,347,653 – 1,347,803	- - - - - - - - -	212	1,347,690 – 1,347,803	+	4	113	85.84	-1.66	0.67	0.595986
102	2R_DroMel_CAF1	1,347,875 – 1,347,995	- - - - - - - - -	213	1,347,875 – 1,347,995	+	3	120	85.63	-2.33	0.77	0.826211
103	2R_DroMel_CAF1	1,348,563 – 1,348,843	- - - - - - - - -	214	1,348,563 – 1,348,683	+	5	120	87.00	-1.80	0.74	0.704340
				215	1,348,643 – 1,348,763	-	5	120	89.06	-2.32	0.74	0.887180
				216	1,348,683 – 1,348,803	-	5	120	85.82	-2.14	0.79	0.933784
				217	1,348,723 – 1,348,843	-	4	120	87.98	-1.51	0.86	0.663790
104	2R_DroMel_CAF1	1,348,948 – 1,349,141	- - - - - - - - -	218	1,348,948 – 1,349,066	+	5	120	93.13	-2.17	0.89	0.997960
				219	1,348,948 – 1,349,066	-	5	120	93.13	-2.46	0.90	0.999568
				220	1,348,988 – 1,349,101	+	5	120	89.52	-2.16	0.71	0.714407
				221	1,349,028 – 1,349,141	-	5	120	89.18	-2.06	0.71	0.661524
105	2R_DroMel_CAF1	1,349,505 – 1,349,703	- - - - - - - - -	222	1,349,505 – 1,349,623	-	4	120	88.33	-1.69	0.78	0.716593
105	2R_DroMel_CAF1	1,349,505 – 1,349,703	- - - - - - - - -	223	1,349,584 – 1,349,703	+	4	120	92.35	-2.04	0.79	0.773536
106	2R_DroMel_CAF1	1,350,970 – 1,351,080	- - - - - - - - -	224	1,350,970 – 1,351,080	+	4	120	91.24	-2.95	0.73	0.825455
107	2R_DroMel_CAF1	1,352,732 – 1,352,852	- - - - - - - - -	225	1,352,732 – 1,352,852	+	4	120	80.30	-2.63	0.70	0.992408
107	2R_DroMel_CAF1	1,352,732 – 1,352,852	- - - - - - - - -	226	1,352,732 – 1,352,852	-	4	120	80.30	-2.37	0.53	0.719126
108	2R_DroMel_CAF1	1,352,892 – 1,353,329	- - - - - - - - -	227	1,352,892 – 1,353,009	+	5	120	93.94	-2.04	0.90	0.997575
				228	1,352,892 – 1,353,009	-	5	120	93.94	-1.20	0.87	0.537836
				229	1,352,932 – 1,353,049	+	5	120	92.67	-1.50	0.88	0.907494
				230	1,352,932 – 1,353,049	-	5	120	92.67	-1.90	0.80	0.908931
				231	1,352,972 – 1,353,089	+	5	120	93.18	-2.09	0.86	0.992120
				232	1,353,009 – 1,353,129	-	5	120	97.25	-1.98	0.97	0.998311
				233	1,353,049 – 1,353,169	+	5	120	98.33	-1.30	0.93	0.650248
				234	1,353,089 – 1,353,209	-	5	120	98.33	-1.31	0.93	0.665280
				235	1,353,129 – 1,353,249	-	5	120	98.50	-1.46	0.94	0.867850
				236	1,353,169 – 1,353,289	-	5	120	95.38	-1.24	0.92	0.775400
				237	1,353,209 – 1,353,329	-	5	120	88.84	-1.97	0.75	0.812160
109	2R_DroMel_CAF1	1,353,479 – 1,353,593	- - - - - - - - -	238	1,353,479 – 1,353,593	-	5	120	86.57	-1.72	0.78	0.724731
110	2R_DroMel_CAF1	1,354,498 – 1,354,618	- - - - - - - - -	239	1,354,498 – 1,354,618	+	5	120	97.25	-1.60	0.98	0.984127
110	2R_DroMel_CAF1	1,354,498 – 1,354,618	- - - - - - - - -	240	1,354,498 – 1,354,618	-	5	120	97.25	-1.26	0.96	0.805967
111	2R_DroMel_CAF1	1,357,380 – 1,357,471	- - - - - - - - -	241	1,357,380 – 1,357,471	+	6	107	83.82	-1.99	0.81	0.766543
111	2R_DroMel_CAF1	1,357,380 – 1,357,471	- - - - - - - - -	242	1,357,380 – 1,357,471	-	6	107	83.82	-2.93	0.79	0.913906
112	2R_DroMel_CAF1	1,363,003 – 1,363,094	- - - "knownCDS=texon1024;Parent=CG_NCBI_GNO_32140320, CG_RGUI_GID_mRNA_40002325, CG_DGIL_SNO_28354459, CG_BATZ_CON_47002711" - - - - -	243	1,363,003 – 1,363,094	+	6	106	80.15	-1.48	0.66	0.646075
113	2R_DroMel_CAF1	1,363,878 – 1,363,974	- - - - - - - - -	244	1,363,878 – 1,363,974	-	3	106	88.67	-1.16	0.98	0.728960
114	2R_DroMel_CAF1	1,364,276 – 1,364,427	- - - - - - - - -	245	1,364,276 – 1,364,387	+	4	111	93.95	-2.73	0.86	0.967774
				246	1,364,276 – 1,364,387	-	4	111	93.95	-2.96	0.86	0.974210
				247	1,364,316 – 1,364,427	+	4	111	97.15	-3.09	0.89	0.938024
				248	1,364,316 – 1,364,427	-	4	111	97.15	-3.13	0.95	0.978627
115	2R_DroMel_CAF1	1,369,209 – 1,369,325	- - - - - - - - -	249	1,369,209 – 1,369,325	-	5	120	92.09	-1.85	0.76	0.725181
116	2R_DroMel_CAF1	1,371,671 – 1,371,790	- - - - - - - - -	250	1,371,671 – 1,371,790	+	4	120	91.24	-1.89	0.81	0.800841
116	2R_DroMel_CAF1	1,371,671 – 1,371,790	- - - - - - - - -	251	1,371,671 – 1,371,790	-	4	120	91.24	-1.40	0.91	0.647543
117	2R_DroMel_CAF1	1,374,051 – 1,374,170	- - - - - - - - -	252	1,374,051 – 1,374,170	-	5	120	92.38	-1.46	0.87	0.863438
118	2R_DroMel_CAF1	1,374,402 – 1,374,522	- - - - - - - - -	253	1,374,402 – 1,374,522	+	5	120	91.46	-2.56	0.72	0.825096
118	2R_DroMel_CAF1	1,374,402 – 1,374,522	- - - - - - - - -	254	1,374,402 – 1,374,522	-	5	120	91.46	-2.20	0.72	0.689389
119	2R_DroMel_CAF1	1,375,373 – 1,375,493	- - - - - - - - -	255	1,375,373 – 1,375,493	-	5	120	92.67	-1.11	0.93	0.596973
120	2R_DroMel_CAF1	1,382,233 – 1,382,353	- - - - - - - - -	256	1,382,233 – 1,382,353	-	5	120	94.78	-1.80	0.85	0.947438
121	2R_DroMel_CAF1	1,383,201 – 1,383,440	- - - - - - - - -	257	1,383,201 – 1,383,320	-	5	120	87.46	-2.24	0.73	0.865655
				258	1,383,240 – 1,383,360	+	5	120	91.25	-2.79	0.75	0.964734
				259	1,383,320 – 1,383,440	-	5	120	91.83	-2.51	0.89	0.999562
122	2R_DroMel_CAF1	1,384,487 – 1,384,606	- - - - - - - - -	260	1,384,487 – 1,384,606	-	5	120	89.36	-1.48	0.78	0.578117
123	2R_DroMel_CAF1	1,385,305 – 1,385,423	- - - - - - - - -	261	1,385,305 – 1,385,423	+	5	119	95.79	-1.25	0.92	0.754651
124	2R_DroMel_CAF1	1,386,885 – 1,387,041	- - - - - - - - -	262	1,386,885 – 1,387,001	-	5	116	97.93	-1.74	0.96	0.987166
124	2R_DroMel_CAF1	1,386,885 – 1,387,041	- - - - - - - - -	263	1,386,925 – 1,387,041	-	5	116	98.62	-1.28	0.95	0.654792
125	2R_DroMel_CAF1	1,387,121 – 1,387,229	- - - - - - - - -	264	1,387,121 – 1,387,229	+	3	108	74.38	-1.38	0.66	0.651218
126	2R_DroMel_CAF1	1,387,968 – 1,388,082	- - - - - - - - -	265	1,387,968 – 1,388,082	-	5	120	91.99	-1.21	0.87	0.540791
127	2R_DroMel_CAF1	1,388,122 – 1,388,349	- - - - - - - - -	266	1,388,122 – 1,388,232	+	5	120	86.49	-2.09	0.69	0.741684
127	2R_DroMel_CAF1	1,388,122 – 1,388,349	- - - - - - - - -	267	1,388,232 – 1,388,349	-	5	120	91.86	-2.54	0.76	0.939303
128	2R_DroMel_CAF1	1,389,267 – 1,389,395	- - - - - - - - -	268	1,389,267 – 1,389,364	+	5	120	80.63	-1.45	0.76	0.573402
				269	1,389,267 – 1,389,364	-	5	120	80.63	-1.57	0.69	0.565981
				270	1,389,290 – 1,389,395	-	5	120	83.78	-1.80	0.73	0.711705
129	2R_DroMel_CAF1	1,389,780 – 1,389,940	- - - - - - - - -	271	1,389,780 – 1,389,900	+	4	120	95.68	-2.11	0.88	0.870177
129	2R_DroMel_CAF1	1,389,780 – 1,389,940	- - - - - - - - -	272	1,389,820 – 1,389,940	+	5	120	95.56	-1.94	0.93	0.997084
130	2R_DroMel_CAF1	1,390,020 – 1,390,124	- - - - - - - - -	273	1,390,020 – 1,390,124	-	3	120	86.48	-1.85	0.80	0.593153
131	2R_DroMel_CAF1	1,390,492 – 1,390,612	- - - - - - - - -	274	1,390,492 – 1,390,612	-	3	120	93.26	-1.78	0.89	0.586993
132	2R_DroMel_CAF1	1,391,996 – 1,392,192	- - - - - - - - -	275	1,391,996 – 1,392,112	-	5	120	92.60	-1.63	0.91	0.973528
				276	1,392,032 – 1,392,152	-	5	120	94.25	-1.44	0.88	0.878916
				277	1,392,072 – 1,392,192	+	5	120	92.67	-1.41	0.81	0.582243
133	2R_DroMel_CAF1	1,393,216 – 1,393,442	- - - - - - - - -	278	1,393,216 – 1,393,336	-	5	120	97.83	-2.21	0.95	0.998654
				279	1,393,256 – 1,393,376	+	5	120	97.83	-2.74	0.92	0.999463
				280	1,393,256 – 1,393,376	-	5	120	97.83	-2.33	0.90	0.996798
				281	1,393,296 – 1,393,416	-	5	120	88.80	-1.74	0.80	0.829978
				282	1,393,336 – 1,393,442	-	5	120	79.53	-1.60	0.76	0.759427
134	2R_DroMel_CAF1	1,393,520 – 1,393,632	- - - - - - - - -	283	1,393,520 – 1,393,632	+	5	120	93.75	-1.50	0.90	0.939339
135	2R_DroMel_CAF1	1,394,701 – 1,394,895	- - - - - - - - -	284	1,394,701 – 1,394,815	+	5	120	91.18	-2.54	0.73	0.883174
				285	1,394,735 – 1,394,855	+	5	120	96.50	-1.65	0.94	0.983555
				286	1,394,735 – 1,394,855	-	5	120	96.50	-3.07	0.98	0.999980
				287	1,394,775 – 1,394,895	-	5	120	88.11	-2.59	0.67	0.778622
136	2R_DroMel_CAF1	1,398,309 – 1,398,506	- - - - - - - - -	288	1,398,309 – 1,398,427	+	5	120	93.31	-2.38	0.81	0.986587
				289	1,398,309 – 1,398,427	-	5	120	93.31	-2.41	0.78	0.955288
				290	1,398,349 – 1,398,466	+	5	120	89.02	-1.53	0.79	0.629931
				291	1,398,387 – 1,398,506	+	5	120	87.31	-2.04	0.68	0.619249
				292	1,398,387 – 1,398,506	-	5	120	87.31	-1.72	0.79	0.762738
137	2R_DroMel_CAF1	1,399,049 – 1,399,195	- - - - - - - - -	293	1,399,049 – 1,399,163	-	5	120	90.98	-1.77	0.95	0.993370
				294	1,399,083 – 1,399,195	+	4	112	98.21	-2.40	0.96	0.924619
				295	1,399,083 – 1,399,195	-	4	112	98.21	-4.62	0.98	0.896816
138	2R_DroMel_CAF1	1,399,900 – 1,400,052	- - - - - - - - -	296	1,399,900 – 1,400,012	-	5	120	88.56	-1.81	0.84	0.926736
138	2R_DroMel_CAF1	1,399,900 – 1,400,052	- - - - - - - - -	297	1,399,940 – 1,400,052	-	5	120	88.73	-2.56	0.73	0.933438
139	2R_DroMel_CAF1	1,400,092 – 1,400,252	- - - - - - - - -	298	1,400,092 – 1,400,212	+	5	120	94.17	-2.21	0.81	0.970418
				299	1,400,092 – 1,400,212	-	5	120	94.17	-2.04	0.94	0.999081
				300	1,400,132 – 1,400,252	+	5	120	95.33	-2.19	0.88	0.996887
				301	1,400,132 – 1,400,252	-	5	120	95.33	-2.85	0.92	0.999924
140	2R_DroMel_CAF1	1,401,819 – 1,402,069	- - - - - - - - -	302	1,401,819 – 1,401,923	+	3	120	81.71	-1.54	0.71	0.507996
				303	1,401,923 – 1,402,029	-	4	120	85.08	-1.45	0.75	0.542744
				304	1,401,960 – 1,402,069	+	4	120	86.83	-2.00	0.77	0.860734
				305	1,401,960 – 1,402,069	-	4	120	86.83	-2.43	0.77	0.948541
141	2R_DroMel_CAF1	1,402,346 – 1,402,466	- - - - - - - - -	306	1,402,346 – 1,402,466	+	5	120	95.42	-1.87	0.82	0.873683
142	2R_DroMel_CAF1	1,402,917 – 1,403,056	- - "RNAmicro=f:1402917_t:1403036_strand:-_p:0.999238" - - - - - -	307	1,402,917 – 1,403,016	+	5	120	84.73	-3.39	0.76	0.997332
				308	1,402,917 – 1,403,016	-	5	120	84.73	-2.16	0.70	0.844566
				309	1,402,957 – 1,403,056	+	5	120	86.03	-3.02	0.82	0.997724
				310	1,402,957 – 1,403,056	-	5	120	86.03	-2.95	0.74	0.985617
143	2R_DroMel_CAF1	1,403,425 – 1,403,880	- - - - - - - - -	311	1,403,425 – 1,403,536	-	5	120	88.36	-1.88	0.82	0.919511
				312	1,403,456 – 1,403,576	+	5	120	97.00	-2.48	0.91	0.999071
				313	1,403,456 – 1,403,576	-	5	120	97.00	-2.63	0.99	0.999942
				314	1,403,496 – 1,403,616	+	5	120	99.33	-2.69	0.99	0.999593
				315	1,403,496 – 1,403,616	-	5	120	99.33	-1.63	0.99	0.953417
				316	1,403,576 – 1,403,690	+	5	120	95.36	-1.69	0.78	0.510095
				317	1,403,690 – 1,403,800	+	5	120	91.58	-2.14	0.82	0.980783
				318	1,403,690 – 1,403,800	-	5	120	91.58	-2.12	0.88	0.996742
				319	1,403,722 – 1,403,840	+	5	120	97.31	-2.97	0.97	0.999953
				320	1,403,722 – 1,403,840	-	5	120	97.31	-3.61	0.96	0.999955
				321	1,403,760 – 1,403,880	+	5	120	97.33	-2.77	0.94	0.999820
				322	1,403,760 – 1,403,880	-	5	120	97.33	-1.62	0.92	0.955458
144	2R_DroMel_CAF1	1,404,968 – 1,405,159	- - - - - - - - -	323	1,404,968 – 1,405,088	+	3	120	86.25	-1.98	0.78	0.651035
				324	1,404,968 – 1,405,088	-	3	120	86.25	-1.84	0.77	0.550755
				325	1,405,048 – 1,405,159	+	3	120	83.91	-2.29	0.79	0.893374
				326	1,405,048 – 1,405,159	-	3	120	83.91	-2.39	0.74	0.880644
145	2R_DroMel_CAF1	1,406,527 – 1,406,872	- - - - - - - - -	327	1,406,527 – 1,406,647	-	5	120	98.00	-2.45	0.96	0.999583
				328	1,406,567 – 1,406,687	-	5	120	98.17	-1.26	0.94	0.661532
				329	1,406,687 – 1,406,795	-	5	120	74.20	-1.66	0.58	0.690776
				330	1,406,755 – 1,406,872	+	5	120	78.66	-2.28	0.37	0.878166
146	2R_DroMel_CAF1	1,407,350 – 1,407,462	- - - - - - - - -	331	1,407,350 – 1,407,462	-	5	120	82.34	-2.18	0.52	0.607730
147	2R_DroMel_CAF1	1,407,688 – 1,407,805	- - - - - - - - -	332	1,407,688 – 1,407,805	+	5	120	91.75	-1.77	0.76	0.696992
148	2R_DroMel_CAF1	1,409,488 – 1,409,607	- - - - - - - - -	333	1,409,488 – 1,409,607	-	3	119	83.97	-1.79	0.88	0.877258
149	2R_DroMel_CAF1	1,417,582 – 1,417,682	- - - - - - - - -	334	1,417,582 – 1,417,682	-	3	116	69.55	-1.33	0.61	0.665797
150	2R_DroMel_CAF1	1,417,838 – 1,417,958	- - - - - - - - -	335	1,417,838 – 1,417,958	+	5	120	92.16	-2.15	0.77	0.888616
151	2R_DroMel_CAF1	1,418,205 – 1,418,321	- - - - - - - - -	336	1,418,205 – 1,418,321	-	5	120	90.70	-1.51	0.95	0.956298
152	2R_DroMel_CAF1	1,419,386 – 1,419,506	- - - - - - - - -	337	1,419,386 – 1,419,506	-	5	120	97.75	-1.99	0.93	0.994159
153	2R_DroMel_CAF1	1,419,665 – 1,419,785	- - - - - - - - -	338	1,419,665 – 1,419,785	-	5	120	93.30	-1.37	0.87	0.772449
154	2R_DroMel_CAF1	1,419,876 – 1,420,140	- - - - - - - - -	339	1,419,876 – 1,419,996	-	5	120	96.08	-2.17	0.84	0.981384
				340	1,419,996 – 1,420,112	+	5	120	87.14	-2.03	0.77	0.880003
				341	1,420,036 – 1,420,140	-	5	120	77.79	-1.86	0.52	0.627338
155	2R_DroMel_CAF1	1,420,180 – 1,420,332	- - - - - - - - -	342	1,420,180 – 1,420,292	-	4	120	87.68	-1.89	0.86	0.891211
155	2R_DroMel_CAF1	1,420,180 – 1,420,332	- - - - - - - - -	343	1,420,212 – 1,420,332	-	5	120	89.25	-2.25	0.69	0.650172
156	2R_DroMel_CAF1	1,420,844 – 1,420,963	- - - - - - - - -	344	1,420,844 – 1,420,963	+	5	120	95.49	-1.77	0.87	0.960134
157	2R_DroMel_CAF1	1,420,987 – 1,421,133	- - - - - - - - -	345	1,420,987 – 1,421,101	+	5	120	90.61	-2.40	0.79	0.979316
				346	1,420,987 – 1,421,101	-	5	120	90.61	-3.06	0.84	0.999225
				347	1,421,021 – 1,421,133	+	5	120	92.20	-4.51	0.87	0.999858
				348	1,421,021 – 1,421,133	-	5	120	92.20	-4.48	0.79	0.998204
158	2R_DroMel_CAF1	1,421,253 – 1,421,450	- - - - - - - - -	349	1,421,253 – 1,421,373	-	5	120	95.17	-1.36	0.97	0.949859
				350	1,421,293 – 1,421,413	-	5	120	95.98	-1.52	0.87	0.860291
				351	1,421,333 – 1,421,450	-	5	120	93.08	-1.60	0.79	0.671874
159	2R_DroMel_CAF1	1,421,646 – 1,421,766	- - - - - - - - -	352	1,421,646 – 1,421,766	-	5	120	92.58	-1.64	0.83	0.879091
160	2R_DroMel_CAF1	1,422,631 – 1,423,023	- - - - - - - - -	353	1,422,631 – 1,422,743	+	5	120	88.54	-1.56	0.80	0.662981
				354	1,422,663 – 1,422,783	+	5	120	97.50	-3.19	0.98	0.999960
				355	1,422,783 – 1,422,903	+	5	120	93.42	-2.34	0.80	0.970648
				356	1,422,783 – 1,422,903	-	5	120	93.42	-1.57	0.84	0.868838
				357	1,422,823 – 1,422,943	+	5	120	92.25	-2.53	0.70	0.611154
				358	1,422,863 – 1,422,983	+	5	120	93.58	-1.93	0.74	0.559164
				359	1,422,903 – 1,423,023	+	5	120	91.75	-1.94	0.74	0.646070
161	2R_DroMel_CAF1	1,423,315 – 1,423,531	- - - - - - - - -	360	1,423,315 – 1,423,411	+	4	116	76.37	-3.21	0.76	0.999909
				361	1,423,315 – 1,423,411	-	4	116	76.37	-2.90	0.69	0.999619
				362	1,423,411 – 1,423,531	+	5	120	91.83	-2.31	0.93	0.999632
				363	1,423,411 – 1,423,531	-	5	120	91.83	-1.54	0.83	0.809669
162	2R_DroMel_CAF1	1,424,361 – 1,424,471	- - - - - - - - -	364	1,424,361 – 1,424,471	-	5	120	86.70	-1.75	0.84	0.854981
163	2R_DroMel_CAF1	1,424,842 – 1,424,962	- - - - - - - - -	365	1,424,842 – 1,424,962	+	5	120	98.00	-2.17	0.96	0.998660
164	2R_DroMel_CAF1	1,425,536 – 1,425,637	- - - - - - - - -	366	1,425,536 – 1,425,637	+	5	120	85.00	-2.00	0.68	0.717210
165	2R_DroMel_CAF1	1,425,677 – 1,425,783	- - - - - - - - -	367	1,425,677 – 1,425,783	-	5	120	80.03	-1.96	0.65	0.832424
166	2R_DroMel_CAF1	1,426,708 – 1,426,908	- - - - - - - - -	368	1,426,708 – 1,426,828	-	5	120	94.33	-1.39	0.89	0.850611
				369	1,426,748 – 1,426,868	+	5	120	94.08	-1.64	0.91	0.980831
				370	1,426,748 – 1,426,868	-	5	120	94.08	-1.24	0.89	0.677911
				371	1,426,788 – 1,426,908	+	5	120	95.42	-1.63	0.95	0.989458
				372	1,426,788 – 1,426,908	-	5	120	95.42	-2.08	0.94	0.999070
167	2R_DroMel_CAF1	1,426,988 – 1,427,136	- - - - - - - - -	373	1,426,988 – 1,427,096	-	5	120	82.45	-1.95	0.58	0.581886
167	2R_DroMel_CAF1	1,426,988 – 1,427,136	- - - - - - - - -	374	1,427,016 – 1,427,136	+	5	120	86.57	-2.78	0.59	0.626814
168	2R_DroMel_CAF1	1,427,860 – 1,428,060	- - - - - - - - -	375	1,427,860 – 1,427,980	+	5	120	98.33	-1.53	0.91	0.850877
				376	1,427,900 – 1,428,020	+	5	120	96.50	-1.82	0.88	0.972185
				377	1,427,940 – 1,428,060	+	5	120	94.08	-2.01	0.84	0.978774
				378	1,427,940 – 1,428,060	-	5	120	94.08	-1.46	0.82	0.643092
169	2R_DroMel_CAF1	1,428,099 – 1,428,219	- - - - - - - - -	379	1,428,099 – 1,428,219	-	5	120	97.00	-2.14	0.92	0.997473
170	2R_DroMel_CAF1	1,428,296 – 1,428,486	- - - "knownCDS=Parent=FBtr0086048;Name=CG12551-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12551-RA" - - - - -	380	1,428,296 – 1,428,406	+	5	120	90.75	-1.43	0.83	0.709300
				381	1,428,326 – 1,428,446	+	5	120	93.67	-2.22	0.85	0.994612
				382	1,428,326 – 1,428,446	-	5	120	93.67	-2.15	0.84	0.987632
				383	1,428,366 – 1,428,486	+	5	120	92.58	-2.00	0.82	0.956873
171	2R_DroMel_CAF1	1,428,911 – 1,429,030	- - - - - - - - -	384	1,428,911 – 1,429,030	+	5	120	94.83	-1.17	0.97	0.796248
171	2R_DroMel_CAF1	1,428,911 – 1,429,030	- - - - - - - - -	385	1,428,911 – 1,429,030	-	5	120	94.83	-1.82	0.83	0.926589
172	2R_DroMel_CAF1	1,429,979 – 1,430,195	- - - - - - - - -	386	1,429,979 – 1,430,075	+	5	120	75.74	-1.99	0.45	0.830022
				387	1,430,013 – 1,430,115	+	5	120	80.98	-3.13	0.65	0.995704
				388	1,430,013 – 1,430,115	-	5	120	80.98	-2.79	0.60	0.982192
				389	1,430,044 – 1,430,155	+	5	120	94.76	-1.98	0.89	0.993747
				390	1,430,044 – 1,430,155	-	5	120	94.76	-1.69	0.90	0.979279
				391	1,430,075 – 1,430,195	+	5	120	93.25	-1.48	0.89	0.922006
				392	1,430,075 – 1,430,195	-	5	120	93.25	-1.46	0.87	0.851834
173	2R_DroMel_CAF1	1,432,284 – 1,432,444	- - - "knownCDS=Parent=FBtr0086049;Name=CG14470-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14470-RA" - - - - -	393	1,432,284 – 1,432,404	+	4	120	80.69	-2.25	0.54	0.627977
				394	1,432,284 – 1,432,404	-	4	120	80.69	-2.09	0.56	0.621970
				395	1,432,324 – 1,432,444	+	3	120	92.78	-1.99	0.88	0.718710
				396	1,432,324 – 1,432,444	-	3	120	92.78	-3.05	0.87	0.950141
174	2R_DroMel_CAF1	1,432,684 – 1,432,804	- - - "knownCDS=Parent=FBtr0086049;Name=CG14470-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14470-RA" - - - - -	397	1,432,684 – 1,432,804	-	3	120	95.56	-1.50	0.97	0.586397
175	2R_DroMel_CAF1	1,432,924 – 1,433,044	- - - "knownCDS=Parent=FBtr0086049;Name=CG14470-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14470-RA" - - - - -	398	1,432,924 – 1,433,044	+	3	120	87.78	-2.06	0.77	0.609002
176	2R_DroMel_CAF1	1,433,905 – 1,434,025	- - - "knownCDS=Parent=FBtr0086049;Name=CG14470-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14470-RA" - - - - -	399	1,433,905 – 1,434,025	-	4	120	85.97	-1.83	0.68	0.695679
177	2R_DroMel_CAF1	1,434,898 – 1,435,098	- - - "knownCDS=Parent=FBtr0086049;Name=CG14470-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14470-RA" - - - - -	400	1,434,898 – 1,435,018	+	4	120	95.42	-1.66	0.87	0.614153
				401	1,434,898 – 1,435,018	-	4	120	95.42	-1.50	0.91	0.588139
				402	1,434,978 – 1,435,098	-	4	120	90.97	-1.59	0.80	0.619050
178	2R_DroMel_CAF1	1,435,843 – 1,436,003	- - - "knownCDS=Parent=FBtr0086049;Name=CG14470-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14470-RA" - - - - -	403	1,435,843 – 1,435,963	-	4	120	87.78	-1.71	0.75	0.700815
178	2R_DroMel_CAF1	1,435,843 – 1,436,003		404	1,435,883 – 1,436,003	+	4	120	90.69	-1.91	0.87	0.908295
179	2R_DroMel_CAF1	1,436,557 – 1,436,677	- - - "knownCDS=Parent=FBtr0086049;Name=CG14470-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14470-RA" - - - - -	405	1,436,557 – 1,436,677	-	4	120	91.67	-1.36	0.90	0.577244
180	2R_DroMel_CAF1	1,436,837 – 1,436,957	- - - "knownCDS=Parent=FBtr0086049;Name=CG14470-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14470-RA" - - - - -	406	1,436,837 – 1,436,957	+	4	120	94.17	-1.51	0.96	0.749608
181	2R_DroMel_CAF1	1,437,397 – 1,437,517	- - - "knownCDS=Parent=FBtr0086049;Name=CG14470-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14470-RA" - - - - -	407	1,437,397 – 1,437,517	-	4	120	93.06	-1.51	0.88	0.636407
182	2R_DroMel_CAF1	1,438,237 – 1,438,676	- - - - - - - - -	408	1,438,237 – 1,438,357	-	4	120	93.75	-1.53	0.90	0.669613
				409	1,438,277 – 1,438,397	+	4	120	93.33	-1.94	0.81	0.751930
				410	1,438,277 – 1,438,397	-	4	120	93.33	-1.78	0.84	0.751774
				411	1,438,357 – 1,438,477	-	4	120	90.14	-2.03	0.71	0.667828
				412	1,438,437 – 1,438,556	-	4	120	91.36	-1.88	0.77	0.697294
				413	1,438,477 – 1,438,596	+	4	120	94.99	-1.82	0.90	0.823493
				414	1,438,477 – 1,438,596	-	4	120	94.99	-3.03	0.91	0.984905
				415	1,438,516 – 1,438,636	+	4	120	98.05	-2.61	0.97	0.958285
				416	1,438,516 – 1,438,636	-	4	120	98.05	-2.11	0.94	0.834368
				417	1,438,556 – 1,438,676	+	4	120	98.33	-2.63	0.98	0.952140
183	2R_DroMel_CAF1	1,439,895 – 1,440,055	- - - - - - - - -	418	1,439,895 – 1,440,015	-	4	120	98.75	-1.77	0.98	0.646048
183	2R_DroMel_CAF1	1,439,895 – 1,440,055	- - - - - - - - -	419	1,439,935 – 1,440,055	+	4	120	97.78	-2.30	1.00	0.949333
184	2R_DroMel_CAF1	1,442,667 – 1,442,787	- - - - - - - - -	420	1,442,667 – 1,442,787	-	5	120	97.33	-1.46	0.85	0.562916
185	2R_DroMel_CAF1	1,442,898 – 1,443,018	- - - - - - - - -	421	1,442,898 – 1,443,018	+	5	120	93.81	-1.35	0.85	0.651676
186	2R_DroMel_CAF1	1,443,098 – 1,443,251	- - - - - - - - -	422	1,443,098 – 1,443,214	+	5	120	89.06	-2.08	0.78	0.914737
186	2R_DroMel_CAF1	1,443,098 – 1,443,251	- - - - - - - - -	423	1,443,134 – 1,443,251	-	5	120	81.77	-1.64	0.67	0.558049
187	2R_DroMel_CAF1	1,444,907 – 1,445,022	- - - - - - - - -	424	1,444,907 – 1,445,022	-	5	120	86.57	-1.68	0.69	0.516876
188	2R_DroMel_CAF1	1,445,049 – 1,445,167	- - - - - - - - -	425	1,445,049 – 1,445,167	-	5	120	94.21	-1.78	0.80	0.797220
189	2R_DroMel_CAF1	1,445,398 – 1,445,513	- - - - - - - - -	426	1,445,398 – 1,445,513	-	5	120	95.04	-1.44	0.86	0.781879
190	2R_DroMel_CAF1	1,445,616 – 1,446,046	- - - - - - - - -	427	1,445,616 – 1,445,724	-	5	120	91.19	-1.48	0.94	0.945593
				428	1,445,656 – 1,445,764	+	5	120	90.84	-2.01	0.88	0.991293
				429	1,445,689 – 1,445,804	+	5	120	94.74	-2.76	0.97	0.999980
				430	1,445,689 – 1,445,804	-	5	120	94.74	-2.66	0.93	0.999923
				431	1,445,724 – 1,445,835	+	5	120	93.72	-2.94	0.93	0.999966
				432	1,445,724 – 1,445,835	-	5	120	93.72	-2.21	0.88	0.998045
				433	1,445,835 – 1,445,937	+	5	120	86.89	-2.54	0.77	0.974748
				434	1,445,857 – 1,445,977	+	5	120	99.33	-2.32	0.99	0.998761
				435	1,445,857 – 1,445,977	-	5	120	99.33	-1.31	0.99	0.728107
				436	1,445,897 – 1,446,017	+	5	120	96.58	-2.73	0.91	0.999708
				437	1,445,897 – 1,446,017	-	5	120	96.58	-4.31	0.94	0.999892
				438	1,445,937 – 1,446,046	-	5	120	91.98	-1.46	0.79	0.579903
191	2R_DroMel_CAF1	1,448,166 – 1,448,286	- - - - - - - - -	439	1,448,166 – 1,448,286	+	3	120	75.44	-1.40	0.71	0.755690
192	2R_DroMel_CAF1	1,449,168 – 1,449,287	- - - - - - - - -	440	1,449,168 – 1,449,287	-	5	120	94.82	-1.20	0.87	0.524720
193	2R_DroMel_CAF1	1,449,447 – 1,449,601	- - - - - - - - -	441	1,449,447 – 1,449,561	+	5	120	96.05	-1.46	0.93	0.941492
				442	1,449,447 – 1,449,561	-	5	120	96.05	-1.81	0.84	0.906777
				443	1,449,487 – 1,449,601	+	5	120	94.67	-1.03	0.96	0.536189
194	2R_DroMel_CAF1	1,450,294 – 1,450,614	- - - - - - - - -	444	1,450,294 – 1,450,414	+	3	120	90.00	-2.72	0.85	0.920623
				445	1,450,334 – 1,450,454	+	3	120	88.89	-2.08	0.77	0.563118
				446	1,450,374 – 1,450,494	+	3	120	86.11	-2.13	0.74	0.669328
				447	1,450,454 – 1,450,574	+	4	120	88.73	-2.18	0.78	0.898837
				448	1,450,454 – 1,450,574	-	4	120	88.73	-2.00	0.76	0.828314
				449	1,450,494 – 1,450,614	+	4	120	96.67	-1.60	0.98	0.711683
				450	1,450,494 – 1,450,614	-	4	120	96.67	-2.81	0.95	0.982435
195	2R_DroMel_CAF1	1,452,945 – 1,453,061	- - - - - - - - -	451	1,452,945 – 1,453,061	+	4	120	71.30	-1.63	0.74	0.967754
196	2R_DroMel_CAF1	1,453,810 – 1,453,913	- - - - - - - - -	452	1,453,810 – 1,453,913	+	5	120	87.28	-2.88	0.89	0.999475
196	2R_DroMel_CAF1	1,453,810 – 1,453,913	- - - - - - - - -	453	1,453,810 – 1,453,913	-	5	120	87.28	-1.74	0.78	0.758393
197	2R_DroMel_CAF1	1,454,088 – 1,454,248	- - - - - - - - -	454	1,454,088 – 1,454,208	-	5	120	94.33	-2.66	0.82	0.994362
197	2R_DroMel_CAF1	1,454,088 – 1,454,248	- - - - - - - - -	455	1,454,128 – 1,454,248	-	5	120	91.33	-1.50	0.86	0.849685
198	2R_DroMel_CAF1	1,460,691 – 1,460,811	- - - - - - - - -	456	1,460,691 – 1,460,811	+	5	120	92.89	-2.23	0.87	0.997058
199	2R_DroMel_CAF1	1,462,523 – 1,462,720	- - - - - - - - -	457	1,462,523 – 1,462,640	+	5	120	93.23	-3.02	0.91	0.999950
				458	1,462,523 – 1,462,640	-	5	120	93.23	-2.10	0.84	0.984768
				459	1,462,560 – 1,462,680	+	5	120	92.42	-4.23	0.85	0.999775
				460	1,462,560 – 1,462,680	-	5	120	92.42	-2.69	0.79	0.986858
				461	1,462,600 – 1,462,720	+	5	120	93.58	-3.57	0.86	0.999828
200	2R_DroMel_CAF1	1,462,800 – 1,462,960	- - - - - - - - -	462	1,462,800 – 1,462,920	+	5	120	95.33	-1.27	0.85	0.513986
200	2R_DroMel_CAF1	1,462,800 – 1,462,960	- - - - - - - - -	463	1,462,840 – 1,462,960	+	5	120	90.83	-1.99	0.84	0.973728
201	2R_DroMel_CAF1	1,467,020 – 1,467,116	- - - "knownCDS=Parent=FBtr0085965, FBtr0085966;Name=CG7882-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7882-RB, FlyBase+Annotation+IDs:CG7882-RA" - - - - -	464	1,467,020 – 1,467,116	+	6	96	77.92	-1.47	0.64	0.727453
202	2R_DroMel_CAF1	1,468,531 – 1,468,622	- - - - - - - - -	465	1,468,531 – 1,468,622	+	4	98	85.71	-1.67	0.78	0.712192
203	2R_DroMel_CAF1	1,475,137 – 1,475,246	- - - - - - - - -	466	1,475,137 – 1,475,246	+	4	120	71.97	-1.63	0.57	0.616513
204	2R_DroMel_CAF1	1,483,732 – 1,483,852	- - - "knownCDS=Parent=FBtr0086031;Name=mle-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11680-RA" - - - - -	467	1,483,732 – 1,483,852	-	6	120	78.78	-2.48	0.55	0.935966
205	2R_DroMel_CAF1	1,490,630 – 1,490,731	- - - - - - - - -	468	1,490,630 – 1,490,731	+	5	118	78.10	-1.87	0.55	0.682835
206	2R_DroMel_CAF1	1,493,991 – 1,494,086	- - - - - - - - -	469	1,493,991 – 1,494,086	+	6	95	79.67	-1.96	0.57	0.721415
207	2R_DroMel_CAF1	1,496,718 – 1,496,821	- - - - - - - - -	470	1,496,718 – 1,496,821	+	3	108	72.59	-4.80	0.49	0.998577
207	2R_DroMel_CAF1	1,496,718 – 1,496,821	- - - - - - - - -	471	1,496,718 – 1,496,821	-	3	108	72.59	-3.74	0.43	0.976923
208	2R_DroMel_CAF1	1,501,047 – 1,501,143	- - - - - - - - -	472	1,501,047 – 1,501,143	+	5	96	95.31	-1.70	0.93	0.990610
208	2R_DroMel_CAF1	1,501,047 – 1,501,143	- - - - - - - - -	473	1,501,047 – 1,501,143	-	5	96	95.31	-2.08	0.91	0.997871
209	2R_DroMel_CAF1	1,505,176 – 1,505,294	- - - "knownCDS=Parent=FBtr0085969;Name=CG14471-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14471-RA" - - - - -	474	1,505,176 – 1,505,294	+	6	118	81.93	-1.49	0.75	0.644523
210	2R_DroMel_CAF1	1,507,334 – 1,507,424	- - - - - - - - -	475	1,507,334 – 1,507,424	-	6	96	75.77	-1.53	0.59	0.686348
211	2R_DroMel_CAF1	1,509,585 – 1,509,772	- - - - - - - - -	476	1,509,585 – 1,509,679	+	5	95	93.01	-2.09	0.74	0.680492
				477	1,509,639 – 1,509,740	+	5	120	80.14	-1.71	0.74	0.787976
				478	1,509,679 – 1,509,772	-	3	93	83.46	-1.46	0.81	0.516964
212	2R_DroMel_CAF1	1,509,851 – 1,509,952	- - - - - - - - -	479	1,509,851 – 1,509,952	-	5	101	91.29	-2.29	0.81	0.980980
213	2R_DroMel_CAF1	1,522,258 – 1,522,378	- - - "knownCDS=Parent=FBtr0086029;Name=Act42A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12051-RA" - - - - -	480	1,522,258 – 1,522,378	-	6	120	84.22	-1.58	0.77	0.500000
214	2R_DroMel_CAF1	1,540,688 – 1,540,795	- - - - - - - - -	481	1,540,688 – 1,540,795	+	5	107	87.76	-2.06	0.75	0.859473
215	2R_DroMel_CAF1	1,543,755 – 1,543,938	- - - - - - - - -	482	1,543,755 – 1,543,868	+	5	118	88.78	-1.95	0.69	0.557384
215	2R_DroMel_CAF1	1,543,755 – 1,543,938	- - - - - - - - -	483	1,543,832 – 1,543,938	+	5	118	79.36	-1.71	0.66	0.689393
216	2R_DroMel_CAF1	1,548,175 – 1,548,269	- - - - - - - - -	484	1,548,175 – 1,548,269	-	5	98	65.97	-1.47	0.52	0.549948
217	2R_DroMel_CAF1	1,552,766 – 1,552,882	- - - - - - - - -	485	1,552,766 – 1,552,882	-	4	120	83.62	-1.62	0.80	0.689428
218	2R_DroMel_CAF1	1,554,415 – 1,554,614	- - - - - - - - -	486	1,554,415 – 1,554,534	+	5	120	88.69	-2.11	0.75	0.871230
				487	1,554,415 – 1,554,534	-	5	120	88.69	-2.05	0.71	0.681522
				488	1,554,454 – 1,554,574	+	5	120	89.83	-1.55	0.74	0.509550
				489	1,554,454 – 1,554,574	-	5	120	89.83	-1.91	0.79	0.887835
				490	1,554,494 – 1,554,614	+	5	120	88.17	-2.77	0.75	0.978015
219	2R_DroMel_CAF1	1,557,436 – 1,557,556	- - - "knownCDS=texon1037;Parent=CG_NCBI_GNO_32143726, CG_BATZ_CON_47002727" - - - - -	491	1,557,436 – 1,557,556	-	4	120	91.94	-1.35	0.87	0.510741
220	2R_DroMel_CAF1	1,558,258 – 1,558,378	- - - "knownCDS=texon1040;Parent=CG_NCBI_GNO_32143726, CG_DGIL_SNO_28354483" - - - - -	492	1,558,258 – 1,558,378	-	5	120	89.92	-1.57	0.81	0.740314
221	2R_DroMel_CAF1	1,559,425 – 1,559,539	- - - - - - - - -	493	1,559,425 – 1,559,539	-	5	120	76.83	-1.80	0.46	0.523143
222	2R_DroMel_CAF1	1,560,042 – 1,560,199	- - - - - - - - -	494	1,560,042 – 1,560,159	+	5	120	87.82	-1.49	0.91	0.795350
				495	1,560,042 – 1,560,159	-	5	120	87.82	-3.49	0.88	0.999836
				496	1,560,079 – 1,560,199	+	5	120	90.00	-2.12	0.87	0.992111
				497	1,560,079 – 1,560,199	-	5	120	90.00	-2.52	0.82	0.993690
223	2R_DroMel_CAF1	1,561,052 – 1,561,172	- - - - - - - - -	498	1,561,052 – 1,561,172	-	5	120	92.42	-1.58	0.89	0.947283
224	2R_DroMel_CAF1	1,561,624 – 1,561,768	- - - - - - - - -	499	1,561,624 – 1,561,744	+	5	120	95.75	-1.81	0.88	0.976197
				500	1,561,624 – 1,561,744	-	5	120	95.75	-1.55	0.92	0.959631
				501	1,561,664 – 1,561,768	-	5	120	88.32	-1.69	0.78	0.718113
225	2R_DroMel_CAF1	1,562,215 – 1,562,334	- - - - - - - - -	502	1,562,215 – 1,562,334	+	5	120	87.72	-1.79	0.70	0.545138
226	2R_DroMel_CAF1	1,562,506 – 1,562,619	- - - - - - - - -	503	1,562,506 – 1,562,619	+	4	120	82.32	-1.91	0.65	0.744525
227	2R_DroMel_CAF1	1,563,788 – 1,563,908	- - - - - - - - -	504	1,563,788 – 1,563,908	+	5	120	96.23	-1.64	0.88	0.938826
228	2R_DroMel_CAF1	1,564,562 – 1,564,660	- - - - - - - - -	505	1,564,562 – 1,564,660	+	3	98	72.45	-1.40	0.63	0.696430
229	2R_DroMel_CAF1	1,565,626 – 1,565,734	- - - "knownCDS=Parent=FBtr0086024;Name=CG7856-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7856-RA" - - - - -	506	1,565,626 – 1,565,734	+	5	109	86.07	-1.64	0.70	0.525099
230	2R_DroMel_CAF1	1,566,094 – 1,566,202	- - - "knownCDS=Parent=FBtr0086024;Name=CG7856-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7856-RA" - - - - -	507	1,566,094 – 1,566,202	-	6	120	80.71	-2.64	0.62	0.914781
231	2R_DroMel_CAF1	1,577,600 – 1,577,720	- - - - - - - - -	508	1,577,600 – 1,577,720	+	3	120	93.33	-2.07	0.84	0.604455
232	2R_DroMel_CAF1	1,578,110 – 1,578,207	- - - - - - - - -	509	1,578,110 – 1,578,207	-	3	97	87.81	-1.46	0.90	0.617193
233	2R_DroMel_CAF1	1,578,913 – 1,579,015	- - - - - - - - -	510	1,578,913 – 1,579,015	-	3	102	79.41	-1.74	0.71	0.805192
234	2R_DroMel_CAF1	1,587,042 – 1,587,202	- - - "knownCDS=Parent=FBtr0086022;Name=CG14590-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14590-RA" - - - - -	511	1,587,042 – 1,587,162	+	6	120	78.28	-1.92	0.59	0.838984
				512	1,587,082 – 1,587,202	+	6	120	80.39	-1.56	0.67	0.693061
				513	1,587,082 – 1,587,202	-	6	120	80.39	-1.74	0.72	0.820907
235	2R_DroMel_CAF1	1,588,352 – 1,588,458	- - - - - - - - -	514	1,588,352 – 1,588,458	-	6	120	81.73	-1.83	0.65	0.661707
236	2R_DroMel_CAF1	1,589,153 – 1,589,262	- - - "knownCDS=Parent=FBtr0086018, FBtr0086020, FBtr0086021;Name=CG7843-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7843-RA, FlyBase+Annotation+IDs:CG7843-RD, FlyBase+Annotation+IDs:CG7843-RC" - - - - -	515	1,589,153 – 1,589,262	+	6	112	81.91	-2.18	0.59	0.640861
237	2R_DroMel_CAF1	1,601,387 – 1,601,489	- - - "knownCDS=Parent=FBtr0086010;Name=EcR-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1765-RE" - - - - -	516	1,601,387 – 1,601,489	+	6	120	83.18	-1.57	0.74	0.559376
238	2R_DroMel_CAF1	1,603,255 – 1,603,347	- - - - - - - - -	517	1,603,255 – 1,603,347	-	6	112	73.27	-1.68	0.57	0.847574
239	2R_DroMel_CAF1	1,612,132 – 1,612,233	- - - - - - - - -	518	1,612,132 – 1,612,233	+	3	101	74.29	-1.47	0.91	0.997620
240	2R_DroMel_CAF1	1,612,483 – 1,612,582	- - - - - - - - -	519	1,612,483 – 1,612,582	-	3	99	94.61	-3.08	0.86	0.929662
241	2R_DroMel_CAF1	1,616,259 – 1,616,351	- - - - - - - - -	520	1,616,259 – 1,616,351	-	3	107	73.02	-1.69	0.58	0.769958
242	2R_DroMel_CAF1	1,628,607 – 1,628,704	- - - - - - - - -	521	1,628,607 – 1,628,704	-	3	120	83.61	-1.23	0.86	0.509145
243	2R_DroMel_CAF1	1,629,441 – 1,629,570	- - - - - - - - -	522	1,629,441 – 1,629,539	-	6	120	76.01	-2.05	0.42	0.613050
243	2R_DroMel_CAF1	1,629,441 – 1,629,570	- - - - - - - - -	523	1,629,473 – 1,629,570	-	4	98	97.28	-1.92	0.98	0.871658
244	2R_DroMel_CAF1	1,629,633 – 1,629,727	- - - - - - - - -	524	1,629,633 – 1,629,727	+	6	120	73.84	-1.75	0.55	0.835967
245	2R_DroMel_CAF1	1,630,097 – 1,630,217	- - - - - - - - -	525	1,630,097 – 1,630,217	+	4	120	67.52	-1.35	0.55	0.523035
245	2R_DroMel_CAF1	1,630,097 – 1,630,217	- - - - - - - - -	526	1,630,097 – 1,630,217	-	4	120	67.52	-1.20	0.60	0.544352
246	2R_DroMel_CAF1	1,630,951 – 1,631,088	- - - - - - - - -	527	1,630,951 – 1,631,064	+	6	120	78.70	-1.99	0.66	0.917138
				528	1,630,951 – 1,631,064	-	6	120	78.70	-2.23	0.64	0.940216
				529	1,630,991 – 1,631,088	+	4	99	95.96	-2.10	0.89	0.870674
				530	1,630,991 – 1,631,088	-	4	99	95.96	-1.81	0.93	0.826371
247	2R_DroMel_CAF1	1,631,102 – 1,631,202	- - - - - - - - -	531	1,631,102 – 1,631,202	+	5	120	79.26	-1.83	0.65	0.779108
248	2R_DroMel_CAF1	1,631,642 – 1,631,742	- - - - - - - - -	532	1,631,642 – 1,631,742	-	4	102	87.66	-1.91	0.75	0.799323
249	2R_DroMel_CAF1	1,632,585 – 1,632,679	- - - - - - - - -	533	1,632,585 – 1,632,679	+	4	101	89.40	-1.81	0.82	0.817274
250	2R_DroMel_CAF1	1,633,302 – 1,633,402	- - - - - - - - -	534	1,633,302 – 1,633,402	+	4	100	95.00	-2.30	0.90	0.946902
250	2R_DroMel_CAF1	1,633,302 – 1,633,402	- - - - - - - - -	535	1,633,302 – 1,633,402	-	4	100	95.00	-2.12	0.78	0.554682
251	2R_DroMel_CAF1	1,635,142 – 1,635,286	- - - - - - - - -	536	1,635,142 – 1,635,249	-	4	119	84.22	-1.46	0.82	0.561473
				537	1,635,175 – 1,635,286	+	4	119	91.30	-1.89	0.88	0.906040
				538	1,635,175 – 1,635,286	-	4	119	91.30	-2.10	0.84	0.911634
252	2R_DroMel_CAF1	1,635,353 – 1,635,443	- - - - - - - - -	539	1,635,353 – 1,635,443	+	4	90	94.44	-1.55	1.02	0.845109
253	2R_DroMel_CAF1	1,636,388 – 1,636,557	- - - - - - - - -	540	1,636,388 – 1,636,482	-	4	103	85.59	-1.98	0.73	0.838261
				541	1,636,414 – 1,636,518	+	4	115	83.54	-2.66	0.62	0.921873
				542	1,636,414 – 1,636,518	-	4	115	83.54	-2.45	0.76	0.972362
				543	1,636,451 – 1,636,557	-	4	117	87.43	-1.79	0.77	0.767086
254	2R_DroMel_CAF1	1,638,669 – 1,638,784	- - - - - - - - -	544	1,638,669 – 1,638,784	-	4	115	96.38	-1.70	0.91	0.696557
255	2R_DroMel_CAF1	1,641,000 – 1,641,116	- - - - - - - - -	545	1,641,000 – 1,641,094	+	3	94	97.16	-2.25	0.98	0.946870
255	2R_DroMel_CAF1	1,641,000 – 1,641,116	- - - - - - - - -	546	1,641,017 – 1,641,116	+	3	99	94.95	-1.70	0.94	0.652059
256	2R_DroMel_CAF1	1,641,612 – 1,641,822	- - - - - - - - -	547	1,641,612 – 1,641,721	+	5	120	71.92	-2.46	0.31	0.994333
				548	1,641,612 – 1,641,721	-	5	120	71.92	-3.00	0.27	0.999377
				549	1,641,721 – 1,641,822	-	5	120	83.55	-2.04	0.81	0.918261
257	2R_DroMel_CAF1	1,643,205 – 1,643,315	- - - - - - - - -	550	1,643,205 – 1,643,315	-	5	119	69.95	-1.80	0.06	0.620380
258	2R_DroMel_CAF1	1,643,536 – 1,643,629	- - - - - - - - -	551	1,643,536 – 1,643,629	-	5	120	52.18	-1.02	0.38	0.806163
259	2R_DroMel_CAF1	1,649,723 – 1,649,839	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000041; Name=Dmel_Lys_CTT_14000041;TFAMID=DmelKCTT-1649832" "tRNAscan=type:Lys:anticodon:CTT f:1649759_t:1649867_strand=-_cove=80.47" - - "Rfam=D45190.1/1-73_RF00005;tRNA;\|5e-27" - - "ncRNAdb=MmuscAK077035_unclassifiable\|3e-17" "Flybase=FBgn0011887:transfer_RNA:lys2:42Aa:cytosolic_tRNA_gene\|3e-37"	552	1,649,723 – 1,649,825	+	4	115	84.50	-1.95	0.91	0.943279
259	2R_DroMel_CAF1	1,649,723 – 1,649,839		553	1,649,746 – 1,649,839	+	5	120	81.90	-1.91	0.96	0.951377
260	2R_DroMel_CAF1	1,650,960 – 1,651,110	- - - - - - - - -	554	1,650,960 – 1,651,071	+	3	115	88.41	-1.95	0.75	0.500000
				555	1,650,960 – 1,651,071	-	3	115	88.41	-2.58	0.74	0.747521
				556	1,650,993 – 1,651,110	+	4	118	91.95	-3.18	0.77	0.906000
				557	1,650,993 – 1,651,110	-	4	118	91.95	-2.21	0.82	0.899869
261	2R_DroMel_CAF1	1,653,469 – 1,653,589	- - - - - - - - -	558	1,653,469 – 1,653,589	-	4	120	91.98	-1.99	0.92	0.952501
262	2R_DroMel_CAF1	1,654,658 – 1,654,761	- - - - - - - - -	559	1,654,658 – 1,654,761	-	5	120	78.65	-2.54	0.61	0.987309
263	2R_DroMel_CAF1	1,657,496 – 1,657,613	- - - - - - - - -	560	1,657,496 – 1,657,613	-	6	120	79.98	-1.80	0.66	0.807757
264	2R_DroMel_CAF1	1,658,001 – 1,658,120	- - - - - - - - -	561	1,658,001 – 1,658,120	+	3	120	82.40	-1.75	0.70	0.610160
264	2R_DroMel_CAF1	1,658,001 – 1,658,120	- - - - - - - - -	562	1,658,001 – 1,658,120	-	3	120	82.40	-1.74	0.68	0.569340
265	2R_DroMel_CAF1	1,659,954 – 1,660,109	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000042; Name=Dmel_Asn_GTT_14000042;TFAMID=DmelNGTT-1660064" "tRNAscan=type:Asn:anticodon:GTT f:1659990_t:1660099_strand=-_cove=86.74" - - "Rfam=AC008257.6/22178-22105_RF00005;tRNA;\|8e-36" - - - "Flybase=FBgn0011931:transfer_RNA:asn5:42Aa:cytosolic_tRNA_gene\|1e-37"	563	1,659,954 – 1,660,069	+	6	120	83.46	-2.11	0.98	0.984128
				564	1,659,954 – 1,660,069	-	6	120	83.46	-1.75	0.99	0.948489
				565	1,659,989 – 1,660,109	+	6	120	83.71	-2.02	0.80	0.769035
266	2R_DroMel_CAF1	1,660,543 – 1,660,683	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000043; Name=Dmel_Asn_GTT_14000043;TFAMID=DmelNGTT-1660574" "tRNAscan=type:Asn:anticodon:GTT f:1660573_t:1660676_strand=+_cove=86.74" - - "Rfam=AC008257.6/22178-22105_RF00005;tRNA;\|7e-36" - - - "Flybase=FBgn0011931:transfer_RNA:asn5:42Aa:cytosolic_tRNA_gene\|9e-38"	566	1,660,543 – 1,660,663	+	3	120	86.67	-2.28	0.90	0.940286
				567	1,660,543 – 1,660,663	-	3	120	86.67	-2.57	0.92	0.981982
				568	1,660,583 – 1,660,683	+	3	101	84.56	-0.95	0.95	0.781661
				569	1,660,583 – 1,660,683	-	3	101	84.56	-1.24	0.95	0.885674
267	2R_DroMel_CAF1	1,660,853 – 1,660,967	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000044; Name=Dmel_Asn_GTT_14000044;TFAMID=DmelNGTT-1660967" - - - "Rfam=AC008257.6/22178-22105_RF00005;tRNA;\|5e-36" - - - "Flybase=FBgn0011931:transfer_RNA:asn5:42Aa:cytosolic_tRNA_gene\|7e-38"	570	1,660,853 – 1,660,967	+	6	120	83.85	-1.91	0.92	0.927514
267	2R_DroMel_CAF1	1,660,853 – 1,660,967		571	1,660,853 – 1,660,967	-	6	120	83.85	-1.79	0.94	0.917349
268	2R_DroMel_CAF1	1,661,957 – 1,662,056	- - - - - - - - -	572	1,661,957 – 1,662,056	-	4	99	94.44	-1.39	0.97	0.624470
269	2R_DroMel_CAF1	1,664,304 – 1,664,407	- - - - - - - - -	573	1,664,304 – 1,664,407	-	4	115	91.44	-2.04	0.86	0.926603
270	2R_DroMel_CAF1	1,664,636 – 1,664,744	- - - - - - - - -	574	1,664,636 – 1,664,744	-	4	108	98.61	-1.61	0.98	0.524891
271	2R_DroMel_CAF1	1,665,795 – 1,665,894	- - - - - - - - -	575	1,665,795 – 1,665,894	-	4	103	88.61	-2.88	0.75	0.947605
272	2R_DroMel_CAF1	1,669,562 – 1,669,692	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000047; Name=Dmel_Asn_GTT_14000047;TFAMID=DmelNGTT-1669585" "tRNAscan=type:Asn:anticodon:GTT f:1669584_t:1669679_strand=+_cove=86.74" - - "Rfam=AC008257.6/22178-22105_RF00005;tRNA;\|6e-36" - - - "Flybase=FBgn0011931:transfer_RNA:asn5:42Aa:cytosolic_tRNA_gene\|8e-38"	576	1,669,562 – 1,669,653	-	3	91	91.18	-1.46	0.98	0.784115
				577	1,669,573 – 1,669,692	+	4	120	75.50	-2.02	0.81	0.989987
				578	1,669,573 – 1,669,692	-	4	120	75.50	-2.17	0.83	0.995800
273	2R_DroMel_CAF1	1,670,048 – 1,670,147	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000049; Name=Dmel_Lys_CTT_14000049;TFAMID=DmelKCTT-1670141" "tRNAscan=type:Lys:anticodon:CTT f:1670068_t:1670160_strand=-_cove=80.47" - - "Rfam=D45190.1/1-73_RF00005;tRNA;\|4e-27" - - "ncRNAdb=MmuscAK077035_unclassifiable\|8e-17" "Flybase=FBgn0011887:transfer_RNA:lys2:42Aa:cytosolic_tRNA_gene\|2e-37"	579	1,670,048 – 1,670,147	+	4	120	72.29	-2.09	0.90	0.998986
273	2R_DroMel_CAF1	1,670,048 – 1,670,147		580	1,670,048 – 1,670,147	-	4	120	72.29	-1.24	0.84	0.939409
274	2R_DroMel_CAF1	1,673,529 – 1,673,626	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000052; Name=Dmel_Ile_AAT_14000052;TFAMID=DmelIAAT-1673539" "tRNAscan=type:Ile:anticodon:AAT f:1673538_t:1673620_strand=+_cove=82.79" - - "Rfam=AC007452.1/104250-104177_RF00005;tRNA;\|4e-36" - - - "Flybase=FBgn0011880:transfer_RNA:ile:42A:cytosolic_tRNA_gene\|6e-38"	581	1,673,529 – 1,673,626	+	5	120	77.78	-0.78	0.88	0.568090
274	2R_DroMel_CAF1	1,673,529 – 1,673,626		582	1,673,529 – 1,673,626	-	5	120	77.78	-1.46	0.88	0.913048
275	2R_DroMel_CAF1	1,674,417 – 1,674,583	- - - - - - - - -	583	1,674,417 – 1,674,507	+	6	120	78.52	-1.93	0.52	0.630831
275	2R_DroMel_CAF1	1,674,417 – 1,674,583	- - - - - - - - -	584	1,674,491 – 1,674,583	+	6	120	74.94	-1.52	0.61	0.789850
276	2R_DroMel_CAF1	1,675,954 – 1,676,101	- - - - - - - - -	585	1,675,954 – 1,676,064	+	4	120	91.74	-1.42	0.90	0.628697
276	2R_DroMel_CAF1	1,675,954 – 1,676,101	- - - - - - - - -	586	1,675,993 – 1,676,101	+	4	117	88.59	-2.01	0.81	0.885636
277	2R_DroMel_CAF1	1,677,747 – 1,677,858	- - - - - - - - -	587	1,677,747 – 1,677,858	+	3	120	69.80	-2.05	0.74	0.999863
278	2R_DroMel_CAF1	1,678,865 – 1,678,963	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000054; Name=Dmel_Lys_CTT_14000054;TFAMID=DmelKCTT-1678956" "tRNAscan=type:Lys:anticodon:CTT f:1678883_t:1678973_strand=-_cove=80.47" - - "Rfam=D45190.1/1-73_RF00005;tRNA;\|4e-27" - - "ncRNAdb=MmuscAK077035_unclassifiable\|8e-17" "Flybase=FBgn0011887:transfer_RNA:lys2:42Aa:cytosolic_tRNA_gene\|2e-37"	588	1,678,865 – 1,678,963	+	6	120	82.46	-2.53	0.96	0.988294
278	2R_DroMel_CAF1	1,678,865 – 1,678,963		589	1,678,865 – 1,678,963	-	6	120	82.46	-1.82	0.97	0.941890
279	2R_DroMel_CAF1	1,681,174 – 1,681,294	- - - "knownCDS=Parent=FBtr0085987;Name=Cyp6w1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8345-RA" - - - - -	590	1,681,174 – 1,681,294	-	5	120	78.25	-1.71	0.64	0.712399
280	2R_DroMel_CAF1	1,685,157 – 1,685,264	- - - - - - - - -	591	1,685,157 – 1,685,264	+	4	120	84.65	-1.78	0.68	0.694043
281	2R_DroMel_CAF1	1,685,946 – 1,686,039	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000056; Name=Dmel_Arg_ACG_14000056;TFAMID=DmelRACG-1686044" - - - "Rfam=BX855613.7/36056-35983_RF00005;tRNA;\|9e-19" - "miRBase=hsa-mir-565\|8e-27" - "Flybase=FBgn0011955:transfer_RNA:arg2:42Aa:cytosolic_tRNA_gene\|2e-34"	592	1,685,946 – 1,686,039	+	3	102	84.85	-0.50	0.95	0.588262
282	2R_DroMel_CAF1	1,686,410 – 1,686,514	- - - - - - - - -	593	1,686,410 – 1,686,514	-	6	120	73.89	-2.29	0.40	0.911786
283	2R_DroMel_CAF1	1,690,664 – 1,690,766	- - - "knownCDS=Parent=FBtr0086003;Name=Ptr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11212-RA" - - - - -	594	1,690,664 – 1,690,766	+	6	102	81.37	-1.62	0.67	0.639770
284	2R_DroMel_CAF1	1,692,653 – 1,692,773	- - - "knownCDS=Parent=FBtr0086003;Name=Ptr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11212-RA" - - - - -	595	1,692,653 – 1,692,773	-	6	120	79.33	-1.98	0.51	0.543449
285	2R_DroMel_CAF1	1,693,494 – 1,693,602	- - - - - - - - -	596	1,693,494 – 1,693,602	+	6	111	79.73	-1.62	0.64	0.695102
286	2R_DroMel_CAF1	1,693,779 – 1,693,894	- - - - - - - - -	597	1,693,779 – 1,693,894	+	5	115	73.02	-1.59	0.22	0.556118
287	2R_DroMel_CAF1	1,697,485 – 1,697,616	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000057; Name=Dmel_Asn_GTT_14000057;TFAMID=DmelNGTT-1697590" "tRNAscan=type:Asn:anticodon:GTT f:1697516_t:1697620_strand=-_cove=86.74" - - "Rfam=AC008257.6/22178-22105_RF00005;tRNA;\|6e-36" - - - "Flybase=FBgn0011931:transfer_RNA:asn5:42Aa:cytosolic_tRNA_gene\|9e-38"	598	1,697,485 – 1,697,590	+	6	110	82.46	-2.02	0.98	0.972498
				599	1,697,485 – 1,697,590	-	6	110	82.46	-2.34	0.98	0.986936
				600	1,697,513 – 1,697,616	+	6	120	78.33	-1.64	0.90	0.918438
				601	1,697,513 – 1,697,616	-	6	120	78.33	-1.02	0.97	0.639490
288	2R_DroMel_CAF1	1,698,456 – 1,698,546	- - - - - - - - -	602	1,698,456 – 1,698,546	+	6	100	82.34	-1.88	0.69	0.686664
288	2R_DroMel_CAF1	1,698,456 – 1,698,546	- - - - - - - - -	603	1,698,456 – 1,698,546	-	6	100	82.34	-1.48	0.68	0.519596
289	2R_DroMel_CAF1	1,714,335 – 1,714,443	- - - - - - - - -	604	1,714,335 – 1,714,443	+	4	120	78.36	-1.69	0.62	0.527212
290	2R_DroMel_CAF1	1,720,483 – 1,720,574	- - - - - - - - -	605	1,720,483 – 1,720,574	-	6	95	80.79	-1.46	0.73	0.703212
291	2R_DroMel_CAF1	1,720,870 – 1,720,990	- - - "knownCDS=Parent=FBtr0086000;Name=l(2)k14710-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8325-RA" - - - - -	606	1,720,870 – 1,720,990	-	6	120	81.33	-1.45	0.64	0.500000
292	2R_DroMel_CAF1	1,721,600 – 1,721,707	- - - - - - - - -	607	1,721,600 – 1,721,707	-	3	120	87.22	-1.59	0.92	0.799532
293	2R_DroMel_CAF1	1,722,758 – 1,722,870	- - - - - - - - -	608	1,722,758 – 1,722,870	-	3	112	95.24	-2.46	0.85	0.789788
294	2R_DroMel_CAF1	1,730,053 – 1,730,205	- - - - - - - - -	609	1,730,053 – 1,730,169	+	3	116	85.07	-1.82	0.77	0.597594
				610	1,730,053 – 1,730,169	-	3	116	85.07	-3.32	0.78	0.975691
				611	1,730,089 – 1,730,205	+	3	117	82.14	-2.62	0.73	0.965164
				612	1,730,089 – 1,730,205	-	3	117	82.14	-2.74	0.86	0.990091
295	2R_DroMel_CAF1	1,733,193 – 1,733,300	- - - "knownCDS=Parent=FBtr0085994;Name=tomboy40-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8330-RA" - - - - -	613	1,733,193 – 1,733,300	-	6	107	79.38	-2.20	0.52	0.760988
296	2R_DroMel_CAF1	1,742,725 – 1,742,826	- - - "knownCDS=Parent=FBtr0085992;Name=bin3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8276-RB" - - - - -	614	1,742,725 – 1,742,826	-	6	111	88.75	-2.18	0.82	0.749517
297	2R_DroMel_CAF1	1,744,879 – 1,744,970	- - - - - - - - -	615	1,744,879 – 1,744,970	-	6	93	77.45	-1.38	0.61	0.556087
298	2R_DroMel_CAF1	1,750,945 – 1,751,055	- - - - - - - - -	616	1,750,945 – 1,751,055	+	3	120	72.54	-2.18	0.51	0.816892
299	2R_DroMel_CAF1	1,755,712 – 1,755,815	- - - - - - - - -	617	1,755,712 – 1,755,815	+	5	119	74.02	-1.63	0.55	0.550956
300	2R_DroMel_CAF1	2,017,699 – 2,017,867	- - - - - - - - -	618	2,017,699 – 2,017,800	+	4	113	86.13	-1.48	0.67	0.500000
				619	2,017,738 – 2,017,838	+	4	112	89.08	-2.80	0.84	0.987504
				620	2,017,738 – 2,017,838	-	4	112	89.08	-2.03	0.75	0.810500
				621	2,017,760 – 2,017,867	+	4	107	95.48	-1.93	0.94	0.912810
301	2R_DroMel_CAF1	2,023,182 – 2,023,272	- - - - - - - - -	622	2,023,182 – 2,023,272	-	6	93	84.60	-3.33	0.73	0.864980
302	2R_DroMel_CAF1	2,028,632 – 2,028,733	- - - - - - - - -	623	2,028,632 – 2,028,733	-	6	101	81.72	-1.59	0.67	0.604665
303	2R_DroMel_CAF1	2,035,502 – 2,035,592	- - - - - - - - -	624	2,035,502 – 2,035,592	+	5	112	81.33	-2.19	0.85	0.969009
304	2R_DroMel_CAF1	2,037,808 – 2,037,925	- - - - - - - - -	625	2,037,808 – 2,037,925	-	5	120	81.92	-2.21	0.58	0.801513
305	2R_DroMel_CAF1	2,038,668 – 2,038,764	- - - - - - - - -	626	2,038,668 – 2,038,764	-	6	96	84.65	-2.66	0.80	0.884217
306	2R_DroMel_CAF1	2,044,231 – 2,044,324	- - - - - - - - -	627	2,044,231 – 2,044,324	+	6	110	75.48	-1.96	0.45	0.664354
307	2R_DroMel_CAF1	2,047,666 – 2,047,764	- - - - - - - - -	628	2,047,666 – 2,047,764	+	4	98	75.36	-2.20	0.59	0.964728
307	2R_DroMel_CAF1	2,047,666 – 2,047,764	- - - - - - - - -	629	2,047,666 – 2,047,764	-	4	98	75.36	-2.14	0.47	0.512782
308	2R_DroMel_CAF1	2,052,007 – 2,052,105	- - - - - - - - -	630	2,052,007 – 2,052,105	+	5	98	91.84	-1.90	0.74	0.653677
309	2R_DroMel_CAF1	2,052,254 – 2,052,401	- - - - - - - - -	631	2,052,254 – 2,052,345	-	6	116	70.91	-2.43	0.92	0.982605
				632	2,052,277 – 2,052,383	-	6	117	79.35	-2.16	0.56	0.825305
				633	2,052,308 – 2,052,401	+	6	115	74.71	-1.74	0.57	0.845858
310	2R_DroMel_CAF1	2,054,394 – 2,054,494	- - - - - - - - -	634	2,054,394 – 2,054,494	+	6	120	71.05	-1.92	0.46	0.884452
311	2R_DroMel_CAF1	2,054,825 – 2,054,922	- - - - - - - - -	635	2,054,825 – 2,054,922	+	5	120	86.24	-2.89	0.87	0.998945
311	2R_DroMel_CAF1	2,054,825 – 2,054,922	- - - - - - - - -	636	2,054,825 – 2,054,922	-	5	120	86.24	-2.17	0.81	0.951513
312	2R_DroMel_CAF1	2,058,333 – 2,058,432	- - - - - - - - -	637	2,058,333 – 2,058,432	+	5	108	78.92	-1.86	0.53	0.577119
313	2R_DroMel_CAF1	2,060,091 – 2,060,198	- - - - - - - - -	638	2,060,091 – 2,060,198	-	6	113	70.63	-1.45	0.53	0.596811
314	2R_DroMel_CAF1	2,076,953 – 2,077,044	- - - - - - - - -	639	2,076,953 – 2,077,044	-	3	91	79.70	-1.74	0.72	0.800624
315	2R_DroMel_CAF1	2,077,394 – 2,077,485	- - - - - - - - -	640	2,077,394 – 2,077,485	+	6	108	78.91	-1.78	0.56	0.613369
316	2R_DroMel_CAF1	2,077,913 – 2,078,009	- - - - - - - - -	641	2,077,913 – 2,078,009	-	5	102	92.58	-1.10	0.96	0.654949
317	2R_DroMel_CAF1	2,087,141 – 2,087,238	- - - - - - - - -	642	2,087,141 – 2,087,238	+	6	118	80.35	-1.82	0.65	0.777359
317	2R_DroMel_CAF1	2,087,141 – 2,087,238	- - - - - - - - -	643	2,087,141 – 2,087,238	-	6	118	80.35	-1.86	0.60	0.688460
318	2R_DroMel_CAF1	2,110,909 – 2,111,004	- - - - - - - - -	644	2,110,909 – 2,111,004	+	5	96	94.09	-2.13	0.88	0.996868
318	2R_DroMel_CAF1	2,110,909 – 2,111,004	- - - - - - - - -	645	2,110,909 – 2,111,004	-	5	96	94.09	-1.71	0.93	0.991351
319	2R_DroMel_CAF1	2,116,269 – 2,116,364	- - - - - - - - -	646	2,116,269 – 2,116,364	+	6	105	80.75	-2.97	0.45	0.808276
319	2R_DroMel_CAF1	2,116,269 – 2,116,364	- - - - - - - - -	647	2,116,269 – 2,116,364	-	6	105	80.75	-3.04	0.65	0.949960
320	2R_DroMel_CAF1	2,125,476 – 2,125,580	- - - - - - - - -	648	2,125,476 – 2,125,580	-	6	106	76.66	-2.36	0.54	0.962358
321	2R_DroMel_CAF1	2,127,137 – 2,127,322	- - - "knownCDS=Parent=FBtr0086105;Name=jing-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9403-RA" - - - - -	649	2,127,137 – 2,127,251	+	6	117	82.38	-2.91	0.59	0.812604
				650	2,127,137 – 2,127,251	-	6	117	82.38	-2.28	0.70	0.795973
				651	2,127,171 – 2,127,282	+	6	117	79.99	-2.75	0.58	0.938541
				652	2,127,171 – 2,127,282	-	6	117	79.99	-2.61	0.55	0.903507
				653	2,127,211 – 2,127,322	+	6	117	77.02	-2.41	0.52	0.952898
				654	2,127,211 – 2,127,322	-	6	117	77.02	-1.77	0.54	0.651737
322	2R_DroMel_CAF1	2,127,431 – 2,127,529	- - - "knownCDS=Parent=FBtr0086105;Name=jing-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9403-RA" - - - - -	655	2,127,431 – 2,127,529	+	5	98	94.69	-2.04	0.90	0.996726
322	2R_DroMel_CAF1	2,127,431 – 2,127,529		656	2,127,431 – 2,127,529	-	5	98	94.69	-1.43	0.97	0.972501
323	2R_DroMel_CAF1	2,127,734 – 2,127,888	- - - "knownCDS=Parent=FBtr0086106;Name=jing-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9403-RC" - - - - -	657	2,127,734 – 2,127,854	+	5	120	97.58	-1.63	0.95	0.975445
323	2R_DroMel_CAF1	2,127,734 – 2,127,888		658	2,127,774 – 2,127,888	+	5	114	98.33	-1.18	0.96	0.551079
324	2R_DroMel_CAF1	2,127,939 – 2,128,081	- - - "knownCDS=Parent=FBtr0086105;Name=jing-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9403-RA" - - - - -	659	2,127,939 – 2,128,041	+	5	102	98.82	-2.82	0.98	0.999767
				660	2,127,939 – 2,128,041	-	5	102	98.82	-4.68	0.98	0.999342
				661	2,127,964 – 2,128,081	-	5	117	98.97	-4.17	1.00	0.999770
325	2R_DroMel_CAF1	2,130,898 – 2,131,026	- - - "knownCDS=Parent=FBtr0086105;Name=jing-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9403-RA" - - - - -	662	2,130,898 – 2,131,014	-	6	120	74.58	-1.77	0.57	0.871804
325	2R_DroMel_CAF1	2,130,898 – 2,131,026		663	2,130,934 – 2,131,026	-	6	102	75.25	-1.03	0.71	0.702115
326	2R_DroMel_CAF1	2,133,788 – 2,133,882	- - - - - - - - -	664	2,133,788 – 2,133,882	+	3	111	72.67	-1.63	0.56	0.586673
326	2R_DroMel_CAF1	2,133,788 – 2,133,882	- - - - - - - - -	665	2,133,788 – 2,133,882	-	3	111	72.67	-1.42	0.62	0.631975
327	2R_DroMel_CAF1	2,140,123 – 2,140,221	- - - - - - - - -	666	2,140,123 – 2,140,221	+	4	98	91.49	-2.17	0.70	0.543021
328	2R_DroMel_CAF1	2,140,743 – 2,140,856	- - - - - - - - -	667	2,140,743 – 2,140,856	-	5	116	93.90	-1.62	0.82	0.819969
329	2R_DroMel_CAF1	2,144,345 – 2,144,438	- - - - - - - - -	668	2,144,345 – 2,144,438	+	5	99	92.40	-3.62	0.86	0.999869
329	2R_DroMel_CAF1	2,144,345 – 2,144,438	- - - - - - - - -	669	2,144,345 – 2,144,438	-	5	99	92.40	-3.57	0.77	0.993974
330	2R_DroMel_CAF1	2,144,747 – 2,144,844	- - - - - - - - -	670	2,144,747 – 2,144,844	-	6	109	69.31	-2.45	0.39	0.986068
331	2R_DroMel_CAF1	2,149,238 – 2,149,358	- - - "knownCDS=Parent=FBtr0086107;Name=Bap170-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3274-RA" - - - - -	671	2,149,238 – 2,149,358	+	6	120	81.28	-2.10	0.72	0.852347
331	2R_DroMel_CAF1	2,149,238 – 2,149,358		672	2,149,238 – 2,149,358	-	6	120	81.28	-3.04	0.65	0.934292
332	2R_DroMel_CAF1	2,152,371 – 2,152,474	- - - "knownCDS=Parent=FBtr0086107;Name=Bap170-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3274-RA" - - - - -	673	2,152,371 – 2,152,474	-	6	103	84.14	-1.85	0.72	0.540021
333	2R_DroMel_CAF1	2,166,961 – 2,167,055	- - - "knownCDS=Parent=FBtr0086109;Name=CG30443-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30443-RA" - - - - -	674	2,166,961 – 2,167,055	+	6	96	81.77	-1.47	0.74	0.633680
334	2R_DroMel_CAF1	2,172,225 – 2,172,335	- - - - - - - - -	675	2,172,225 – 2,172,335	+	6	120	74.63	-2.94	0.46	0.995882
334	2R_DroMel_CAF1	2,172,225 – 2,172,335	- - - - - - - - -	676	2,172,225 – 2,172,335	-	6	120	74.63	-1.48	0.56	0.580416
335	2R_DroMel_CAF1	2,184,236 – 2,184,356	- - - "knownCDS=Parent=FBtr0086145;Name=CG3194-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3194-RA" - - - - -	677	2,184,236 – 2,184,356	+	6	120	80.67	-1.24	0.68	0.512198
336	2R_DroMel_CAF1	2,188,542 – 2,188,641	- - - - - - - - -	678	2,188,542 – 2,188,641	+	3	117	81.03	-1.90	0.68	0.758285
337	2R_DroMel_CAF1	2,195,201 – 2,195,302	- - - "knownCDS=Parent=FBtr0086122;Name=CG15909-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15909-RA" - - - - -	679	2,195,201 – 2,195,302	-	6	105	66.21	-2.06	0.33	0.859995
338	2R_DroMel_CAF1	2,195,441 – 2,195,538	- - - "knownCDS=Parent=FBtr0086122;Name=CG15909-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15909-RA" - - - - -	680	2,195,441 – 2,195,538	+	5	97	66.80	-2.34	0.44	0.987534
339	2R_DroMel_CAF1	2,236,414 – 2,236,509	- - - - - - - - -	681	2,236,414 – 2,236,509	+	4	95	96.14	-2.17	0.94	0.943110
340	2R_DroMel_CAF1	2,238,445 – 2,238,539	- - - - - - - - -	682	2,238,445 – 2,238,539	+	3	98	89.00	-2.05	0.80	0.607328
340	2R_DroMel_CAF1	2,238,445 – 2,238,539	- - - - - - - - -	683	2,238,445 – 2,238,539	-	3	98	89.00	-2.19	0.90	0.903031
341	2R_DroMel_CAF1	2,240,054 – 2,240,147	- - - "knownCDS=Parent=FBtr0086136;Name=l(2)01289-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9432-RA" - - - - -	684	2,240,054 – 2,240,147	+	6	106	83.52	-2.36	0.63	0.560395
342	2R_DroMel_CAF1	2,255,261 – 2,255,357	- - - "knownCDS=Parent=FBtr0086125;Name=phtf-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3268-RA" - - - - -	685	2,255,261 – 2,255,357	+	6	99	77.10	-2.78	0.44	0.967198
342	2R_DroMel_CAF1	2,255,261 – 2,255,357		686	2,255,261 – 2,255,357	-	6	99	77.10	-2.12	0.41	0.506153
343	2R_DroMel_CAF1	2,257,749 – 2,257,850	- - - - - - - - -	687	2,257,749 – 2,257,850	+	6	107	78.72	-1.08	0.69	0.527791
344	2R_DroMel_CAF1	2,262,545 – 2,262,642	- - - - - - - - -	688	2,262,545 – 2,262,642	-	3	97	83.51	-1.84	0.69	0.582632
345	2R_DroMel_CAF1	2,283,593 – 2,283,686	- - - - - - - - -	689	2,283,593 – 2,283,686	+	6	118	68.01	-1.98	0.31	0.719624
345	2R_DroMel_CAF1	2,283,593 – 2,283,686	- - - - - - - - -	690	2,283,593 – 2,283,686	-	6	118	68.01	-1.94	0.51	0.957765
346	2R_DroMel_CAF1	2,286,699 – 2,286,799	- - - - - - - - -	691	2,286,699 – 2,286,799	+	6	114	78.00	-1.92	0.50	0.587537
347	2R_DroMel_CAF1	2,288,135 – 2,288,239	- - - - - - - - -	692	2,288,135 – 2,288,239	-	6	114	77.30	-1.61	0.68	0.887648
348	2R_DroMel_CAF1	2,294,219 – 2,294,316	- - - - - - - - -	693	2,294,219 – 2,294,316	+	5	114	75.32	-1.59	0.21	0.551925
349	2R_DroMel_CAF1	2,299,907 – 2,300,000	- - - - - - - - -	694	2,299,907 – 2,300,000	+	6	110	69.84	-1.92	0.33	0.609647
350	2R_DroMel_CAF1	2,306,898 – 2,307,023	- - - - - - - - -	695	2,306,898 – 2,306,992	+	6	95	81.88	-2.66	0.61	0.829992
				696	2,306,898 – 2,306,992	-	6	95	81.88	-2.69	0.58	0.803614
				697	2,306,931 – 2,307,023	+	6	107	77.15	-2.52	0.42	0.883657
				698	2,306,931 – 2,307,023	-	6	107	77.15	-3.19	0.51	0.993816
351	2R_DroMel_CAF1	2,307,155 – 2,307,271	- - - - - - - - -	699	2,307,155 – 2,307,271	+	4	116	83.94	-1.61	0.71	0.622616
351	2R_DroMel_CAF1	2,307,155 – 2,307,271	- - - - - - - - -	700	2,307,155 – 2,307,271	-	4	116	83.94	-1.82	0.74	0.783997
352	2R_DroMel_CAF1	2,309,064 – 2,309,165	- - - - - - - - -	701	2,309,064 – 2,309,165	-	5	101	87.03	-1.50	0.79	0.563781
353	2R_DroMel_CAF1	2,310,379 – 2,310,476	- - - - - - - - -	702	2,310,379 – 2,310,476	-	4	102	79.15	-2.07	0.60	0.824429
354	2R_DroMel_CAF1	2,326,473 – 2,326,565	- - - - - - - - -	703	2,326,473 – 2,326,565	-	6	92	82.25	-1.73	0.67	0.612651
355	2R_DroMel_CAF1	2,330,116 – 2,330,216	- - - - - - - - -	704	2,330,116 – 2,330,216	+	5	110	73.83	-1.97	0.38	0.870177
356	2R_DroMel_CAF1	2,332,565 – 2,332,669	- - - - - - - - -	705	2,332,565 – 2,332,669	-	6	117	81.59	-2.12	0.57	0.593597
357	2R_DroMel_CAF1	2,334,714 – 2,334,818	- - - - - - - - -	706	2,334,714 – 2,334,818	+	4	104	95.51	-1.73	0.94	0.822576
358	2R_DroMel_CAF1	2,334,936 – 2,335,029	- - - - - - - - -	707	2,334,936 – 2,335,029	-	4	100	82.55	-1.60	0.68	0.570444
359	2R_DroMel_CAF1	2,336,149 – 2,336,254	- - - - - - - - -	708	2,336,149 – 2,336,254	+	6	115	77.42	-1.99	0.48	0.628674
359	2R_DroMel_CAF1	2,336,149 – 2,336,254	- - - - - - - - -	709	2,336,149 – 2,336,254	-	6	115	77.42	-1.86	0.52	0.661605
360	2R_DroMel_CAF1	2,336,535 – 2,336,647	- - - - - - - - -	710	2,336,535 – 2,336,647	+	5	118	67.25	-1.98	0.38	0.843497
361	2R_DroMel_CAF1	2,341,187 – 2,341,294	- - - - - - - - -	711	2,341,187 – 2,341,294	+	5	107	90.09	-2.58	0.80	0.988589
361	2R_DroMel_CAF1	2,341,187 – 2,341,294	- - - - - - - - -	712	2,341,187 – 2,341,294	-	5	107	90.09	-2.41	0.78	0.973412
362	2R_DroMel_CAF1	2,346,444 – 2,346,570	- - - "knownCDS=Parent=FBtr0086161;Name=CG15236-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15236-RA" - - - - -	713	2,346,444 – 2,346,536	-	6	107	80.82	-1.81	0.64	0.711361
362	2R_DroMel_CAF1	2,346,444 – 2,346,570		714	2,346,478 – 2,346,570	+	5	98	90.57	-1.68	0.79	0.755751
363	2R_DroMel_CAF1	2,347,530 – 2,347,621	- - - "knownCDS=Parent=FBtr0086161;Name=CG15236-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15236-RA" - - - - -	715	2,347,530 – 2,347,621	-	6	120	79.42	-1.18	0.71	0.596665
364	2R_DroMel_CAF1	2,348,326 – 2,348,426	- - - "knownCDS=Parent=FBtr0086160;Name=CG15236-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15236-RB" - - - - -	716	2,348,326 – 2,348,426	+	6	120	79.50	-1.33	0.68	0.642392
365	2R_DroMel_CAF1	2,351,108 – 2,351,228	- - - - - - - - -	717	2,351,108 – 2,351,228	-	5	120	97.42	-1.91	0.96	0.996462
366	2R_DroMel_CAF1	2,351,499 – 2,351,794	- - - - - - - - -	718	2,351,499 – 2,351,605	+	4	120	85.80	-3.11	0.69	0.969244
				719	2,351,499 – 2,351,605	-	4	120	85.80	-1.91	0.72	0.791261
				720	2,351,539 – 2,351,634	+	4	109	83.28	-2.81	0.63	0.958026
				721	2,351,577 – 2,351,674	+	4	109	84.79	-1.65	0.86	0.756123
				722	2,351,674 – 2,351,794	+	5	120	98.50	-2.00	0.97	0.996405
				723	2,351,674 – 2,351,794	-	5	120	98.50	-2.32	0.95	0.998699
367	2R_DroMel_CAF1	2,352,443 – 2,352,786	- - - - - - - - -	724	2,352,443 – 2,352,550	-	5	120	91.98	-1.38	0.84	0.688228
				725	2,352,550 – 2,352,666	+	5	120	94.47	-1.47	0.93	0.955623
				726	2,352,666 – 2,352,786	-	5	120	95.33	-1.19	0.90	0.611350
368	2R_DroMel_CAF1	2,355,067 – 2,355,185	- - - - - - - - -	727	2,355,067 – 2,355,185	-	5	120	96.15	-2.40	0.89	0.998553
369	2R_DroMel_CAF1	2,355,265 – 2,355,379	- - - - - - - - -	728	2,355,265 – 2,355,379	-	5	120	93.21	-1.98	0.87	0.991511
370	2R_DroMel_CAF1	2,355,932 – 2,356,051	- - - - - - - - -	729	2,355,932 – 2,356,051	+	5	120	96.24	-1.76	0.83	0.844579
371	2R_DroMel_CAF1	2,356,591 – 2,356,710	- - - - - - - - -	730	2,356,591 – 2,356,710	-	5	120	90.13	-1.77	0.74	0.622352
372	2R_DroMel_CAF1	2,357,481 – 2,357,594	- - - - - - - - -	731	2,357,481 – 2,357,594	+	5	120	92.83	-1.70	0.84	0.915221
373	2R_DroMel_CAF1	2,357,634 – 2,357,754	- - - - - - - - -	732	2,357,634 – 2,357,754	+	5	120	96.25	-1.81	0.90	0.985091
374	2R_DroMel_CAF1	2,358,447 – 2,358,567	- - - - - - - - -	733	2,358,447 – 2,358,567	-	5	120	82.04	-1.74	0.74	0.733993
375	2R_DroMel_CAF1	2,358,607 – 2,358,818	- - - - - - - - -	734	2,358,607 – 2,358,722	+	5	120	92.24	-1.93	0.77	0.820939
				735	2,358,607 – 2,358,722	-	5	120	92.24	-1.95	0.81	0.943254
				736	2,358,722 – 2,358,818	+	4	113	84.58	-1.64	0.67	0.598622
				737	2,358,722 – 2,358,818	-	4	113	84.58	-1.76	0.75	0.749139
376	2R_DroMel_CAF1	2,359,205 – 2,359,501	- - - - - - - - -	738	2,359,205 – 2,359,325	+	5	120	97.17	-1.44	0.95	0.927676
				739	2,359,245 – 2,359,365	-	5	120	97.83	-2.25	0.92	0.997713
				740	2,359,285 – 2,359,389	-	5	120	93.12	-2.62	0.90	0.999822
				741	2,359,389 – 2,359,501	+	5	120	83.80	-1.93	0.65	0.665205
				742	2,359,389 – 2,359,501	-	5	120	83.80	-2.37	0.70	0.921568
377	2R_DroMel_CAF1	2,359,957 – 2,360,068	- - - - - - - - -	743	2,359,957 – 2,360,068	+	5	120	90.75	-1.76	0.77	0.764636
377	2R_DroMel_CAF1	2,359,957 – 2,360,068	- - - - - - - - -	744	2,359,957 – 2,360,068	-	5	120	90.75	-2.75	0.73	0.911999
378	2R_DroMel_CAF1	2,360,291 – 2,360,394	- - - - - - - - -	745	2,360,291 – 2,360,394	-	4	120	74.60	-1.88	0.69	0.955304
379	2R_DroMel_CAF1	2,361,108 – 2,361,225	- - - - - - - - -	746	2,361,108 – 2,361,225	+	5	120	76.79	-2.62	0.49	0.993223
380	2R_DroMel_CAF1	2,361,991 – 2,362,111	- - - - - - - - -	747	2,361,991 – 2,362,111	-	5	120	92.57	-1.61	0.80	0.749448
381	2R_DroMel_CAF1	2,362,311 – 2,362,426	- - - - - - - - -	748	2,362,311 – 2,362,426	+	5	115	95.57	-1.93	0.89	0.991366
382	2R_DroMel_CAF1	2,362,775 – 2,362,895	- - - - - - - - -	749	2,362,775 – 2,362,895	+	5	120	93.16	-1.83	0.76	0.667522
382	2R_DroMel_CAF1	2,362,775 – 2,362,895	- - - - - - - - -	750	2,362,775 – 2,362,895	-	5	120	93.16	-1.61	0.81	0.764484
383	2R_DroMel_CAF1	2,363,088 – 2,363,203	- - - - - - - - -	751	2,363,088 – 2,363,203	-	4	120	86.67	-1.44	0.69	0.506671
384	2R_DroMel_CAF1	2,363,302 – 2,363,422	- - - - - - - - -	752	2,363,302 – 2,363,422	+	5	120	92.83	-1.81	0.77	0.737588
385	2R_DroMel_CAF1	2,363,660 – 2,363,780	- - - - - - - - -	753	2,363,660 – 2,363,780	+	5	120	91.25	-1.54	0.83	0.804482
385	2R_DroMel_CAF1	2,363,660 – 2,363,780	- - - - - - - - -	754	2,363,660 – 2,363,780	-	5	120	91.25	-2.24	0.86	0.995818
386	2R_DroMel_CAF1	2,364,036 – 2,364,226	- - - - - - - - -	755	2,364,036 – 2,364,149	-	5	120	91.87	-1.68	0.97	0.993957
386	2R_DroMel_CAF1	2,364,036 – 2,364,226	- - - - - - - - -	756	2,364,109 – 2,364,226	-	5	120	93.94	-1.55	0.85	0.868460
387	2R_DroMel_CAF1	2,364,306 – 2,364,462	- - - - - - - - -	757	2,364,306 – 2,364,422	-	5	120	89.20	-1.56	0.80	0.702617
387	2R_DroMel_CAF1	2,364,306 – 2,364,462	- - - - - - - - -	758	2,364,342 – 2,364,462	-	5	120	95.25	-2.18	0.93	0.999386
388	2R_DroMel_CAF1	2,364,564 – 2,364,804	- - - - - - - - -	759	2,364,564 – 2,364,684	+	5	120	91.15	-1.61	0.86	0.916008
				760	2,364,604 – 2,364,724	+	5	120	96.00	-1.45	0.91	0.909054
				761	2,364,644 – 2,364,764	+	5	120	97.50	-2.31	0.93	0.998781
				762	2,364,684 – 2,364,804	+	5	120	98.50	-1.53	0.94	0.913206
389	2R_DroMel_CAF1	2,365,466 – 2,365,666	- - - - - - - - -	763	2,365,466 – 2,365,586	+	5	120	94.81	-1.49	0.89	0.911745
				764	2,365,506 – 2,365,626	+	5	120	96.67	-2.37	0.90	0.998317
				765	2,365,546 – 2,365,666	+	5	120	91.38	-3.17	0.84	0.999445
				766	2,365,546 – 2,365,666	-	5	120	91.38	-1.58	0.88	0.924298
390	2R_DroMel_CAF1	2,366,206 – 2,366,325	- - - - - - - - -	767	2,366,206 – 2,366,325	+	5	120	95.72	-2.57	0.84	0.994006
390	2R_DroMel_CAF1	2,366,206 – 2,366,325	- - - - - - - - -	768	2,366,206 – 2,366,325	-	5	120	95.72	-1.93	0.85	0.968373
391	2R_DroMel_CAF1	2,368,172 – 2,368,323	- - - - - - - - -	769	2,368,172 – 2,368,284	+	5	120	81.42	-1.65	0.67	0.581032
391	2R_DroMel_CAF1	2,368,172 – 2,368,323	- - - - - - - - -	770	2,368,212 – 2,368,323	+	5	120	81.29	-2.14	0.52	0.668892
392	2R_DroMel_CAF1	2,370,682 – 2,370,915	- - - - - - - - -	771	2,370,682 – 2,370,795	+	5	120	93.72	-2.54	0.83	0.994873
				772	2,370,682 – 2,370,795	-	5	120	93.72	-2.45	0.92	0.999812
				773	2,370,795 – 2,370,915	-	5	120	93.33	-1.30	0.82	0.513108
393	2R_DroMel_CAF1	2,370,991 – 2,371,104	- - - - - - - - -	774	2,370,991 – 2,371,104	+	5	120	93.26	-1.46	0.88	0.884450
394	2R_DroMel_CAF1	2,372,257 – 2,372,363	- - - - - - - - -	775	2,372,257 – 2,372,363	-	5	120	87.29	-1.86	0.72	0.661469
395	2R_DroMel_CAF1	2,372,845 – 2,372,949	- - - - - - - - -	776	2,372,845 – 2,372,949	-	3	119	80.95	-1.28	0.83	0.600165
396	2R_DroMel_CAF1	2,374,154 – 2,374,295	- - - - - - - - -	777	2,374,154 – 2,374,255	-	5	101	87.23	-1.51	0.83	0.649284
396	2R_DroMel_CAF1	2,374,154 – 2,374,295	- - - - - - - - -	778	2,374,175 – 2,374,295	-	5	120	88.92	-1.62	0.87	0.879010
397	2R_DroMel_CAF1	2,378,484 – 2,378,593	- - - "knownCDS=Parent=FBtr0086208;Name=coro-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9446-RB" - - - - -	779	2,378,484 – 2,378,593	-	6	120	81.43	-1.40	0.66	0.500000
398	2R_DroMel_CAF1	2,385,373 – 2,385,473	- - - "knownCDS=Parent=FBtr0086206;Name=CG9447-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9447-RA" - - - - -	780	2,385,373 – 2,385,473	-	6	105	79.71	-1.33	0.67	0.594357
399	2R_DroMel_CAF1	2,392,041 – 2,392,240	- - - "knownCDS=Parent=FBtr0086194;Name=CG9454-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9454-RA" - - - - -	781	2,392,041 – 2,392,161	-	6	120	82.89	-1.88	0.75	0.709827
399	2R_DroMel_CAF1	2,392,041 – 2,392,240		782	2,392,121 – 2,392,240	+	6	120	82.51	-1.73	0.65	0.550478
400	2R_DroMel_CAF1	2,394,924 – 2,395,069	- - - - - - - - -	783	2,394,924 – 2,395,044	-	5	120	93.50	-1.42	0.85	0.756190
				784	2,394,964 – 2,395,069	+	5	115	88.57	-1.96	0.86	0.968281
				785	2,394,964 – 2,395,069	-	5	115	88.57	-2.25	0.75	0.898976
401	2R_DroMel_CAF1	2,396,689 – 2,396,821	- - - - - - - - -	786	2,396,689 – 2,396,789	+	3	105	84.62	-2.09	0.73	0.724472
				787	2,396,689 – 2,396,789	-	3	105	84.62	-2.26	0.72	0.792019
				788	2,396,722 – 2,396,821	+	3	106	82.86	-1.75	0.68	0.543734
				789	2,396,722 – 2,396,821	-	3	106	82.86	-2.39	0.73	0.915718
402	2R_DroMel_CAF1	2,398,410 – 2,398,527	- - - "knownCDS=Parent=FBtr0086164;Name=CG9460-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9460-RA" - - - - -	790	2,398,410 – 2,398,527	+	6	117	75.95	-1.93	0.46	0.602354
403	2R_DroMel_CAF1	2,410,908 – 2,411,016	- - - - - - - - -	791	2,410,908 – 2,411,016	-	4	108	91.51	-1.42	0.86	0.576217
404	2R_DroMel_CAF1	2,411,718 – 2,411,847	- - - - - - - - -	792	2,411,718 – 2,411,808	+	4	94	85.49	-1.72	0.90	0.849266
				793	2,411,718 – 2,411,808	-	4	94	85.49	-4.57	0.92	0.998030
				794	2,411,751 – 2,411,847	-	4	100	85.90	-1.53	0.76	0.612072
405	2R_DroMel_CAF1	2,412,135 – 2,412,228	- - - - - - - - -	795	2,412,135 – 2,412,228	-	6	93	82.08	-1.51	0.71	0.596087
406	2R_DroMel_CAF1	2,416,055 – 2,416,166	- - - - - - - - -	796	2,416,055 – 2,416,166	+	6	120	74.12	-2.24	0.54	0.975770
407	2R_DroMel_CAF1	2,418,644 – 2,418,737	- - - - - - - - -	797	2,418,644 – 2,418,737	-	6	114	74.40	-1.80	0.47	0.616794
408	2R_DroMel_CAF1	2,424,686 – 2,424,781	- - - - - - - - -	798	2,424,686 – 2,424,781	-	4	95	83.18	-2.16	0.72	0.918350
409	2R_DroMel_CAF1	2,429,788 – 2,429,890	- - - - - - - - -	799	2,429,788 – 2,429,890	-	3	102	80.72	-1.75	0.63	0.542105
410	2R_DroMel_CAF1	2,430,457 – 2,430,561	- - - - - - - - -	800	2,430,457 – 2,430,561	-	4	108	92.68	-1.90	0.77	0.640712
411	2R_DroMel_CAF1	2,432,828 – 2,432,922	- - - - - - - - -	801	2,432,828 – 2,432,922	+	5	99	78.90	-2.30	0.57	0.944693
411	2R_DroMel_CAF1	2,432,828 – 2,432,922	- - - - - - - - -	802	2,432,828 – 2,432,922	-	5	99	78.90	-2.00	0.47	0.660775
412	2R_DroMel_CAF1	2,433,712 – 2,433,876	- - - - - - - - -	803	2,433,712 – 2,433,803	-	4	102	88.91	-2.18	0.69	0.721345
				804	2,433,733 – 2,433,841	+	5	111	83.97	-2.60	0.72	0.967145
				805	2,433,733 – 2,433,841	-	5	111	83.97	-3.78	0.73	0.997974
				806	2,433,765 – 2,433,876	+	5	115	79.98	-2.69	0.67	0.990639
				807	2,433,765 – 2,433,876	-	5	115	79.98	-1.86	0.55	0.563110
413	2R_DroMel_CAF1	2,436,350 – 2,436,463	- - - "knownCDS=Parent=FBtr0086166, FBtr0086167;Name=CG3358-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3358-RA, FlyBase+Annotation+IDs:CG3358-RB" - - - - -	808	2,436,350 – 2,436,463	-	6	119	78.47	-1.73	0.60	0.746765
414	2R_DroMel_CAF1	2,440,273 – 2,440,378	- - - "knownCDS=Parent=FBtr0086193;Name=CG33558-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33558-RA" - - - - -	809	2,440,273 – 2,440,378	+	6	110	81.52	-1.42	0.66	0.524181
415	2R_DroMel_CAF1	2,443,772 – 2,443,924	- - - "knownCDS=Parent=FBtr0086193;Name=CG33558-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33558-RA" - - - - -	810	2,443,772 – 2,443,884	+	6	115	78.43	-2.50	0.56	0.949212
415	2R_DroMel_CAF1	2,443,772 – 2,443,924		811	2,443,807 – 2,443,924	+	6	120	80.14	-2.64	0.52	0.871758
416	2R_DroMel_CAF1	2,444,071 – 2,444,189	- - - "knownCDS=Parent=FBtr0086193;Name=CG33558-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33558-RA" - - - - -	812	2,444,071 – 2,444,189	-	6	118	80.91	-1.49	0.66	0.602959
417	2R_DroMel_CAF1	2,448,210 – 2,448,319	- - - - - - - - -	813	2,448,210 – 2,448,319	+	3	109	96.94	-1.83	0.93	0.702486
418	2R_DroMel_CAF1	2,455,212 – 2,455,311	- - - - - - - - -	814	2,455,212 – 2,455,311	+	3	117	80.35	-2.33	0.63	0.901353
419	2R_DroMel_CAF1	2,458,579 – 2,458,718	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000059; Name=Dmel_Lys_CTT_14000059;TFAMID=DmelKCTT-2458693" "tRNAscan=type:Lys:anticodon:CTT f:2458620_t:2458733_strand=-_cove=80.47" - - "Rfam=D45190.1/1-73_RF00005;tRNA;\|6e-27" - - "ncRNAdb=MmuscAK077035_unclassifiable\|3e-17" "Flybase=FBgn0011887:transfer_RNA:lys2:42Aa:cytosolic_tRNA_gene\|4e-37"	815	2,458,579 – 2,458,678	+	4	120	78.93	-2.16	0.83	0.982447
419	2R_DroMel_CAF1	2,458,579 – 2,458,718		816	2,458,610 – 2,458,718	+	5	120	88.82	-1.80	0.94	0.983778
420	2R_DroMel_CAF1	2,459,549 – 2,459,663	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000060; Name=Dmel_Lys_CTT_14000060;TFAMID=DmelKCTT-2459623" "tRNAscan=type:Lys:anticodon:CTT f:2459550_t:2459623_strand=-_cove=80.47" - - "Rfam=D45190.1/1-73_RF00005;tRNA;\|5e-27" - - "ncRNAdb=MmuscAK077035_unclassifiable\|3e-17" "Flybase=FBgn0011887:transfer_RNA:lys2:42Aa:cytosolic_tRNA_gene\|3e-37"	817	2,459,549 – 2,459,663	+	6	120	81.87	-1.33	0.80	0.593235
421	2R_DroMel_CAF1	2,460,080 – 2,460,204	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000061; Name=Dmel_Lys_CTT_14000061;TFAMID=DmelKCTT-2460169" "tRNAscan=type:Lys:anticodon:CTT f:2460096_t:2460184_strand=-_cove=80.47" - - "Rfam=D45190.1/1-73_RF00005;tRNA;\|5e-27" - - "ncRNAdb=MmuscAK077035_unclassifiable\|3e-17" "Flybase=FBgn0011887:transfer_RNA:lys2:42Aa:cytosolic_tRNA_gene\|3e-37"	818	2,460,080 – 2,460,181	+	6	120	78.18	-2.07	0.97	0.963660
				819	2,460,080 – 2,460,181	-	6	120	78.18	-1.44	0.97	0.879728
				820	2,460,102 – 2,460,204	+	6	102	84.74	-1.65	0.82	0.599740
422	2R_DroMel_CAF1	2,460,908 – 2,461,049	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000062; Name=Dmel_Lys_CTT_14000062;TFAMID=DmelKCTT-2461018" "tRNAscan=type:Lys:anticodon:CTT f:2460945_t:2461054_strand=-_cove=80.47" - - "Rfam=D45190.1/1-73_RF00005;tRNA;\|6e-27" - - "ncRNAdb=MmuscAK077035_unclassifiable\|3e-17" "Flybase=FBgn0011887:transfer_RNA:lys2:42Aa:cytosolic_tRNA_gene\|4e-37"	821	2,460,908 – 2,461,020	+	4	118	82.73	-2.25	0.95	0.990189
				822	2,460,908 – 2,461,020	-	4	118	82.73	-0.93	0.96	0.532086
				823	2,460,944 – 2,461,049	+	6	118	82.80	-1.54	0.83	0.664855
423	2R_DroMel_CAF1	2,472,447 – 2,472,569	- - - - - - - - -	824	2,472,447 – 2,472,543	-	6	108	71.33	-1.46	0.53	0.565350
				825	2,472,465 – 2,472,569	+	6	105	74.79	-1.86	0.54	0.868180
				826	2,472,465 – 2,472,569	-	6	105	74.79	-1.68	0.55	0.730751
424	2R_DroMel_CAF1	2,472,742 – 2,472,833	- - - - - - - - -	827	2,472,742 – 2,472,833	-	5	102	77.16	-2.12	0.47	0.877881
425	2R_DroMel_CAF1	2,480,350 – 2,480,445	- - - - - - - - -	828	2,480,350 – 2,480,445	-	4	98	85.26	-2.77	0.74	0.977294
426	2R_DroMel_CAF1	2,485,656 – 2,485,749	- - - - - - - - -	829	2,485,656 – 2,485,749	+	4	93	91.76	-2.40	0.78	0.880953
426	2R_DroMel_CAF1	2,485,656 – 2,485,749	- - - - - - - - -	830	2,485,656 – 2,485,749	-	4	93	91.76	-2.18	0.90	0.967472
427	2R_DroMel_CAF1	2,496,036 – 2,496,132	- - - - - - - - -	831	2,496,036 – 2,496,132	-	5	97	90.04	-2.49	0.72	0.867683
428	2R_DroMel_CAF1	2,496,146 – 2,496,256	- - - - - - - - -	832	2,496,146 – 2,496,256	-	5	110	92.06	-1.53	0.91	0.952252
429	2R_DroMel_CAF1	2,497,802 – 2,497,905	- - - - - - - - -	833	2,497,802 – 2,497,905	+	5	112	86.12	-2.44	0.67	0.841310
430	2R_DroMel_CAF1	2,498,331 – 2,498,451	- - - "knownCDS=Parent=FBtr0086170;Name=CG17002-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17002-RB" - - - - -	834	2,498,331 – 2,498,451	-	6	120	79.22	-2.79	0.52	0.945596
431	2R_DroMel_CAF1	2,503,958 – 2,504,065	- - - - - - - - -	835	2,503,958 – 2,504,065	+	5	110	69.01	-1.25	0.66	0.732329
432	2R_DroMel_CAF1	2,508,508 – 2,508,628	- - - "knownCDS=Parent=FBtr0086172, FBtr0086173;Name=Tsp42Ea-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18817-RB, FlyBase+Annotation+IDs:CG18817-RC" - - - - -	836	2,508,508 – 2,508,628	-	6	120	80.50	-2.74	0.65	0.940208
433	2R_DroMel_CAF1	2,509,369 – 2,509,460	- - - - - - - - -	837	2,509,369 – 2,509,460	+	3	92	65.89	-1.18	0.59	0.563467
434	2R_DroMel_CAF1	2,510,045 – 2,510,162	- - - - - - - - -	838	2,510,045 – 2,510,162	-	4	117	83.98	-1.57	0.66	0.530677
435	2R_DroMel_CAF1	2,511,015 – 2,511,116	- - - - - - - - -	839	2,511,015 – 2,511,116	+	6	111	76.42	-2.69	0.58	0.990060
435	2R_DroMel_CAF1	2,511,015 – 2,511,116	- - - - - - - - -	840	2,511,015 – 2,511,116	-	6	111	76.42	-2.03	0.53	0.881566
436	2R_DroMel_CAF1	2,517,547 – 2,517,647	- - - - - - - - -	841	2,517,547 – 2,517,647	+	3	113	51.95	-1.41	0.42	0.623697
437	2R_DroMel_CAF1	2,517,756 – 2,517,856	- - - "knownCDS=Parent=FBtr0086178;Name=CG30160-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30160-RA" - - - - -	842	2,517,756 – 2,517,856	+	3	100	71.38	-2.08	0.68	0.999292
438	2R_DroMel_CAF1	2,524,347 – 2,524,497	- - - - - - - - -	843	2,524,347 – 2,524,457	+	4	118	81.56	-2.03	0.59	0.660364
438	2R_DroMel_CAF1	2,524,347 – 2,524,497	- - - - - - - - -	844	2,524,385 – 2,524,497	+	4	120	83.74	-2.03	0.66	0.794549
439	2R_DroMel_CAF1	2,526,257 – 2,526,350	- - - - - - - - -	845	2,526,257 – 2,526,350	+	6	104	80.69	-3.07	0.43	0.814774
440	2R_DroMel_CAF1	2,540,884 – 2,540,985	- - - "knownCDS=Parent=FBtr0089024;Name=Tsp42Eg-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12142-RA" - - - - -	846	2,540,884 – 2,540,985	-	6	101	77.61	-1.11	0.77	0.760729
441	2R_DroMel_CAF1	2,546,211 – 2,546,302	- - - "knownCDS=Parent=FBtr0089025, FBtr0089026, FBtr0089027;Name=Tsp42Eh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12844-RA, FlyBase+Annotation+IDs:CG12844-RB, FlyBase+Annotation+IDs:CG12844-RC" - - - - -	847	2,546,211 – 2,546,302	-	6	91	79.28	-1.04	0.72	0.534470
442	2R_DroMel_CAF1	2,550,740 – 2,550,844	- - - - - - - - -	848	2,550,740 – 2,550,844	+	3	120	75.42	-2.68	0.51	0.929618
443	2R_DroMel_CAF1	2,551,843 – 2,551,954	- - - - - - - - -	849	2,551,843 – 2,551,954	+	3	112	94.93	-2.79	0.97	0.987946
443	2R_DroMel_CAF1	2,551,843 – 2,551,954	- - - - - - - - -	850	2,551,843 – 2,551,954	-	3	112	94.93	-2.18	0.92	0.864689
444	2R_DroMel_CAF1	2,560,706 – 2,560,826	- - - - - - - - -	851	2,560,706 – 2,560,826	+	4	120	87.48	-2.05	0.73	0.831634
445	2R_DroMel_CAF1	2,563,468 – 2,563,564	- - - "knownCDS=Parent=FBtr0089033;Name=lbm-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2374-RA" - - - - -	852	2,563,468 – 2,563,564	+	6	99	75.89	-1.81	0.60	0.900630
445	2R_DroMel_CAF1	2,563,468 – 2,563,564		853	2,563,468 – 2,563,564	-	6	99	75.89	-2.81	0.52	0.992742
446	2R_DroMel_CAF1	2,565,068 – 2,565,276	- - - "knownCDS=Parent=FBtr0089034;Name=Tsp42En-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12839-RA" - - - - -	854	2,565,068 – 2,565,166	+	6	98	74.23	-1.74	0.59	0.891866
446	2R_DroMel_CAF1	2,565,068 – 2,565,276		855	2,565,166 – 2,565,276	-	6	116	75.97	-2.48	0.48	0.965530
447	2R_DroMel_CAF1	2,569,694 – 2,569,800	- - "RNAmicro=f:2569694_t:2569812_strand:-_p:0.999885" - - - - - -	856	2,569,694 – 2,569,800	+	4	119	72.21	-4.67	0.68	0.999984
447	2R_DroMel_CAF1	2,569,694 – 2,569,800		857	2,569,694 – 2,569,800	-	4	119	72.21	-3.47	0.78	0.999987
448	2R_DroMel_CAF1	2,583,085 – 2,583,175	- - - - - - - - -	858	2,583,085 – 2,583,175	+	6	105	83.23	-2.79	0.56	0.599404
449	2R_DroMel_CAF1	2,585,306 – 2,585,421	- - - "knownCDS=Parent=FBtr0089057;Name=CG12831-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12831-RA" - - - - -	859	2,585,306 – 2,585,421	+	6	116	78.90	-1.82	0.62	0.819245
450	2R_DroMel_CAF1	2,592,211 – 2,592,314	- - - - - - - - -	860	2,592,211 – 2,592,314	+	5	103	89.67	-1.69	0.81	0.820897
450	2R_DroMel_CAF1	2,592,211 – 2,592,314	- - - - - - - - -	861	2,592,211 – 2,592,314	-	5	103	89.67	-1.44	0.80	0.585918
451	2R_DroMel_CAF1	2,593,571 – 2,593,662	- - - - - - - - -	862	2,593,571 – 2,593,662	+	6	109	75.99	-1.44	0.67	0.847424
452	2R_DroMel_CAF1	2,595,455 – 2,595,588	- - - - - - - - -	863	2,595,455 – 2,595,565	+	5	110	87.18	-1.87	0.81	0.879159
				864	2,595,455 – 2,595,565	-	5	110	87.18	-1.76	0.70	0.574161
				865	2,595,494 – 2,595,588	+	3	94	97.87	-2.87	0.96	0.977412
453	2R_DroMel_CAF1	2,598,137 – 2,598,255	- - - - - - - - -	866	2,598,137 – 2,598,255	-	5	118	89.36	-1.75	0.74	0.627226
454	2R_DroMel_CAF1	2,601,306 – 2,601,405	- - - - - - - - -	867	2,601,306 – 2,601,405	+	6	113	71.82	-1.97	0.45	0.872463
455	2R_DroMel_CAF1	2,606,227 – 2,606,323	- - - - - - - - -	868	2,606,227 – 2,606,323	+	6	96	72.62	-2.95	0.53	0.998159
455	2R_DroMel_CAF1	2,606,227 – 2,606,323	- - - - - - - - -	869	2,606,227 – 2,606,323	-	6	96	72.62	-2.51	0.27	0.873259
456	2R_DroMel_CAF1	2,610,849 – 2,610,974	- - - - - - - - -	870	2,610,849 – 2,610,943	+	6	94	76.35	-2.32	0.56	0.967942
				871	2,610,849 – 2,610,943	-	6	94	76.35	-2.55	0.49	0.973212
				872	2,610,874 – 2,610,974	+	6	101	82.01	-1.85	0.67	0.682785
				873	2,610,874 – 2,610,974	-	6	101	82.01	-3.12	0.63	0.904922
457	2R_DroMel_CAF1	2,612,237 – 2,612,328	- - - - - - - - -	874	2,612,237 – 2,612,328	-	6	94	78.99	-2.05	0.49	0.559094
458	2R_DroMel_CAF1	2,617,953 – 2,618,111	- - "RNAmicro=f:2617953_t:2618065_strand:-_p:0.658409" - - - - - -	875	2,617,953 – 2,618,052	+	3	113	75.52	-1.97	0.79	0.994880
				876	2,617,953 – 2,618,052	-	3	113	75.52	-1.78	0.69	0.952886
				877	2,618,014 – 2,618,111	-	6	99	79.03	-1.31	0.78	0.780590
459	2R_DroMel_CAF1	2,619,607 – 2,619,704	- - - "knownCDS=Parent=FBtr0089040;Name=CG12835-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12835-RA" - - - - -	878	2,619,607 – 2,619,704	-	6	98	86.23	-2.39	0.81	0.795980
460	2R_DroMel_CAF1	2,622,780 – 2,622,871	- - - - - - - - -	879	2,622,780 – 2,622,871	-	6	98	86.21	-1.98	0.79	0.582427
461	2R_DroMel_CAF1	2,626,209 – 2,626,337	- - - - - - - - -	880	2,626,209 – 2,626,313	+	3	104	88.45	-3.00	0.83	0.943191
				881	2,626,209 – 2,626,313	-	3	104	88.45	-3.78	0.73	0.915477
				882	2,626,233 – 2,626,337	+	5	104	83.25	-3.34	0.69	0.994922
				883	2,626,233 – 2,626,337	-	5	104	83.25	-3.30	0.69	0.994489
462	2R_DroMel_CAF1	2,630,602 – 2,630,713	- - "RNAmicro=f:2630602_t:2630721_strand:-_p:0.716626" "knownCDS=Parent=FBtr0089038, FBtr0089039;Name=esn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12833-RB, FlyBase+Annotation+IDs:CG12833-RA" - - - - -	884	2,630,602 – 2,630,713	+	6	120	76.96	-2.21	0.46	0.809807
463	2R_DroMel_CAF1	2,638,819 – 2,638,912	- - - - - - - - -	885	2,638,819 – 2,638,912	-	5	97	84.87	-1.61	0.72	0.554730
464	2R_DroMel_CAF1	2,650,692 – 2,650,823	- - - - - - - - -	886	2,650,692 – 2,650,788	-	6	120	79.64	-2.10	0.58	0.820684
				887	2,650,713 – 2,650,823	+	6	115	78.42	-2.64	0.84	0.973384
				888	2,650,713 – 2,650,823	-	6	115	78.42	-1.67	0.59	0.658650
465	2R_DroMel_CAF1	2,650,861 – 2,650,952	- - - - - - - - -	889	2,650,861 – 2,650,952	-	6	97	82.03	-2.16	0.63	0.713190
466	2R_DroMel_CAF1	2,655,655 – 2,655,748	- - - - - - - - -	890	2,655,655 – 2,655,748	+	4	93	86.92	-1.38	0.74	0.508334
467	2R_DroMel_CAF1	2,656,605 – 2,656,712	- - - - - - - - -	891	2,656,605 – 2,656,712	-	4	110	78.83	-1.69	0.62	0.517516
468	2R_DroMel_CAF1	2,657,700 – 2,657,791	- - - - - - - - -	892	2,657,700 – 2,657,791	-	6	92	83.77	-1.70	0.71	0.500000
469	2R_DroMel_CAF1	2,659,583 – 2,659,675	- - - - - - - - -	893	2,659,583 – 2,659,675	+	6	100	75.49	-1.98	0.62	0.957970
470	2R_DroMel_CAF1	2,660,567 – 2,660,658	- - - - - - - - -	894	2,660,567 – 2,660,658	-	4	91	85.71	-1.88	0.61	0.510964
471	2R_DroMel_CAF1	2,662,119 – 2,662,213	- - - - - - - - -	895	2,662,119 – 2,662,213	+	4	97	89.53	-2.85	0.68	0.755631
471	2R_DroMel_CAF1	2,662,119 – 2,662,213	- - - - - - - - -	896	2,662,119 – 2,662,213	-	4	97	89.53	-2.78	0.73	0.907390
472	2R_DroMel_CAF1	2,667,469 – 2,667,567	- - - - - - - - -	897	2,667,469 – 2,667,567	+	3	98	89.73	-2.18	0.93	0.939332
473	2R_DroMel_CAF1	2,667,713 – 2,667,811	- - - - - - - - -	898	2,667,713 – 2,667,811	+	3	100	83.67	-2.54	0.62	0.761278
474	2R_DroMel_CAF1	2,674,633 – 2,674,740	- - - "knownCDS=texon10386;Parent=CG_RGUI_GID_mRNA_40002442, CG_DGIL_SNO_28354694" - - - - -	899	2,674,633 – 2,674,740	+	6	115	77.47	-2.88	0.28	0.691741
475	2R_DroMel_CAF1	2,677,548 – 2,677,656	- - - - - - - - -	900	2,677,548 – 2,677,656	-	6	115	75.02	-1.80	0.61	0.919176
476	2R_DroMel_CAF1	2,682,655 – 2,682,755	- - - - - - - - -	901	2,682,655 – 2,682,755	+	6	100	83.95	-1.54	0.77	0.515801
477	2R_DroMel_CAF1	2,683,293 – 2,683,460	- - - - - - - - -	902	2,683,293 – 2,683,394	+	3	101	74.91	-1.32	0.67	0.571743
				903	2,683,333 – 2,683,429	+	3	96	73.48	-1.63	0.66	0.933851
				904	2,683,359 – 2,683,460	-	3	101	76.34	-2.22	0.87	0.998862
478	2R_DroMel_CAF1	2,685,223 – 2,685,388	- - - - - - - - -	905	2,685,223 – 2,685,328	+	6	117	77.68	-3.22	0.42	0.983431
				906	2,685,223 – 2,685,328	-	6	117	77.68	-2.82	0.43	0.950239
				907	2,685,289 – 2,685,388	+	4	100	84.76	-1.65	0.69	0.630021
				908	2,685,289 – 2,685,388	-	4	100	84.76	-1.82	0.65	0.655709
479	2R_DroMel_CAF1	2,688,400 – 2,688,518	- - - "knownCDS=Parent=FBtr0089045;Name=CG11060-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11060-RA" - - - - -	909	2,688,400 – 2,688,518	-	6	118	85.31	-2.22	0.76	0.637211
480	2R_DroMel_CAF1	2,688,597 – 2,688,707	- - - "knownCDS=Parent=FBtr0089045;Name=CG11060-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11060-RA" - - - - -	910	2,688,597 – 2,688,707	+	6	120	79.94	-2.07	0.51	0.573581
481	2R_DroMel_CAF1	2,691,570 – 2,691,680	- - - "knownCDS=Parent=FBtr0089046;Name=CG33140-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33140-RA" - - - - -	911	2,691,570 – 2,691,680	+	6	120	86.24	-2.23	0.75	0.528176
482	2R_DroMel_CAF1	2,693,203 – 2,693,323	- - - "knownCDS=Parent=FBtr0089047;Name=CG30385-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30385-RA" - - - - -	912	2,693,203 – 2,693,323	+	5	120	86.17	-2.26	0.67	0.772112
483	2R_DroMel_CAF1	2,695,771 – 2,695,872	- - - "knownCDS=Parent=FBtr0089048;Name=CG30384-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30384-RA" - - - - -	913	2,695,771 – 2,695,872	-	5	110	80.44	-1.64	0.70	0.661689
484	2R_DroMel_CAF1	2,697,151 – 2,697,317	- - - - - - - - -	914	2,697,151 – 2,697,243	+	5	120	77.52	-2.77	0.64	0.997398
				915	2,697,151 – 2,697,243	-	5	120	77.52	-2.52	0.74	0.995163
				916	2,697,165 – 2,697,280	+	6	120	69.89	-2.81	0.47	0.997828
				917	2,697,165 – 2,697,280	-	6	120	69.89	-2.99	0.45	0.998569
				918	2,697,203 – 2,697,317	+	6	120	76.84	-2.32	0.50	0.926942
				919	2,697,203 – 2,697,317	-	6	120	76.84	-2.18	0.49	0.856683
485	2R_DroMel_CAF1	2,699,891 – 2,699,999	- - - - - - - - -	920	2,699,891 – 2,699,999	-	5	109	97.16	-1.88	1.01	0.998314
486	2R_DroMel_CAF1	2,700,034 – 2,700,127	- - - - - - - - -	921	2,700,034 – 2,700,127	-	5	97	82.52	-2.26	0.70	0.920991
487	2R_DroMel_CAF1	2,701,550 – 2,701,669	- - - - - - - - -	922	2,701,550 – 2,701,640	-	5	90	94.67	-2.12	0.85	0.989359
				923	2,701,574 – 2,701,669	+	5	95	92.84	-1.59	0.81	0.750792
				924	2,701,574 – 2,701,669	-	5	95	92.84	-1.60	0.90	0.962495
488	2R_DroMel_CAF1	2,702,422 – 2,702,582	- - - - - - - - -	925	2,702,422 – 2,702,516	+	5	94	78.66	-2.72	0.78	0.996540
				926	2,702,422 – 2,702,516	-	5	94	78.66	-1.86	0.64	0.814814
				927	2,702,491 – 2,702,582	+	5	91	96.48	-1.33	0.95	0.878471
489	2R_DroMel_CAF1	2,702,605 – 2,702,795	- - - - - - - - -	928	2,702,605 – 2,702,705	+	5	100	90.70	-3.40	0.78	0.996419
				929	2,702,605 – 2,702,705	-	5	100	90.70	-2.04	0.75	0.826416
				930	2,702,626 – 2,702,730	-	5	106	90.47	-2.25	0.83	0.988977
				931	2,702,666 – 2,702,758	+	5	106	84.77	-2.09	0.77	0.904944
				932	2,702,705 – 2,702,795	+	5	104	91.18	-1.21	0.98	0.797102
490	2R_DroMel_CAF1	2,702,854 – 2,702,975	- - - - - - - - -	933	2,702,854 – 2,702,945	+	5	91	94.62	-2.31	0.91	0.999385
490	2R_DroMel_CAF1	2,702,854 – 2,702,975	- - - - - - - - -	934	2,702,865 – 2,702,975	+	5	110	96.12	-1.28	0.93	0.804680
491	2R_DroMel_CAF1	2,703,499 – 2,703,598	- - - - - - - - -	935	2,703,499 – 2,703,598	+	6	120	80.19	-2.61	0.55	0.896817
492	2R_DroMel_CAF1	2,703,763 – 2,703,859	- - - - - - - - -	936	2,703,763 – 2,703,859	+	5	120	74.91	-1.71	0.49	0.507081
493	2R_DroMel_CAF1	2,707,040 – 2,707,135	- - - - - - - - -	937	2,707,040 – 2,707,135	+	4	115	68.89	-2.10	0.46	0.865376
493	2R_DroMel_CAF1	2,707,040 – 2,707,135	- - - - - - - - -	938	2,707,040 – 2,707,135	-	4	115	68.89	-1.75	0.56	0.907784
494	2R_DroMel_CAF1	2,713,432 – 2,713,527	- - - - - - - - -	939	2,713,432 – 2,713,527	+	6	99	77.89	-1.34	0.68	0.735614
495	2R_DroMel_CAF1	2,718,055 – 2,718,232	- - - - - - - - -	940	2,718,055 – 2,718,156	-	5	111	88.00	-2.05	0.82	0.949342
				941	2,718,086 – 2,718,196	+	6	120	78.83	-2.85	0.77	0.974451
				942	2,718,086 – 2,718,196	-	6	120	78.83	-1.98	0.76	0.939410
				943	2,718,116 – 2,718,232	+	6	118	79.61	-2.30	0.60	0.898535
				944	2,718,116 – 2,718,232	-	6	118	79.61	-1.22	0.74	0.662316
496	2R_DroMel_CAF1	2,720,641 – 2,720,733	- - - - - - - - -	945	2,720,641 – 2,720,733	+	5	94	75.60	-2.46	0.13	0.988626
496	2R_DroMel_CAF1	2,720,641 – 2,720,733	- - - - - - - - -	946	2,720,641 – 2,720,733	-	5	94	75.60	-1.53	0.19	0.520958
497	2R_DroMel_CAF1	2,730,051 – 2,730,149	- - - - - - - - -	947	2,730,051 – 2,730,149	-	5	104	75.05	-2.39	0.47	0.987202
498	2R_DroMel_CAF1	2,736,833 – 2,736,936	- - - - - - - - -	948	2,736,833 – 2,736,936	+	5	117	86.99	-1.84	0.72	0.676779
499	2R_DroMel_CAF1	2,736,976 – 2,737,081	- - - - - - - - -	949	2,736,976 – 2,737,081	-	6	114	71.01	-2.41	0.44	0.987521
500	2R_DroMel_CAF1	2,738,202 – 2,738,295	- - - - - - - - -	950	2,738,202 – 2,738,295	-	5	102	75.91	-1.71	0.63	0.799051
501	2R_DroMel_CAF1	2,741,096 – 2,741,189	- - - - - - - - -	951	2,741,096 – 2,741,189	+	6	118	77.36	-1.71	0.60	0.784003
501	2R_DroMel_CAF1	2,741,096 – 2,741,189	- - - - - - - - -	952	2,741,096 – 2,741,189	-	6	118	77.36	-1.74	0.53	0.573336
502	2R_DroMel_CAF1	2,742,129 – 2,742,231	- - - - - - - - -	953	2,742,129 – 2,742,231	+	3	108	94.34	-3.47	0.90	0.975797
502	2R_DroMel_CAF1	2,742,129 – 2,742,231	- - - - - - - - -	954	2,742,129 – 2,742,231	-	3	108	94.34	-2.14	0.86	0.681806
503	2R_DroMel_CAF1	2,742,802 – 2,742,931	- - - - - - - - -	955	2,742,802 – 2,742,902	+	6	106	84.06	-2.41	0.79	0.831111
				956	2,742,802 – 2,742,902	-	6	106	84.06	-2.49	0.79	0.853969
				957	2,742,834 – 2,742,931	+	6	113	77.94	-1.94	0.63	0.905060
				958	2,742,834 – 2,742,931	-	6	113	77.94	-2.44	0.70	0.976199
504	2R_DroMel_CAF1	2,755,473 – 2,755,593	- - - "knownCDS=Parent=FBtr0089050;Name=Ady43A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1851-RA" - - - - -	959	2,755,473 – 2,755,593	-	6	120	77.94	-1.76	0.62	0.844052
505	2R_DroMel_CAF1	2,758,928 – 2,759,030	- - - - - - - - -	960	2,758,928 – 2,759,030	+	4	120	81.76	-1.90	0.64	0.722127
506	2R_DroMel_CAF1	2,760,899 – 2,761,020	- - - - - - - - -	961	2,760,899 – 2,760,990	+	6	93	80.51	-2.02	0.55	0.595162
				962	2,760,899 – 2,760,990	-	6	93	80.51	-2.00	0.56	0.644160
				963	2,760,911 – 2,761,020	+	6	119	82.61	-1.77	0.66	0.559345
507	2R_DroMel_CAF1	2,761,625 – 2,761,732	- - - "knownCDS=Parent=FBtr0089049;Name=CG11086-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11086-RA" - - - - -	964	2,761,625 – 2,761,732	-	6	120	79.60	-1.39	0.75	0.761749
508	2R_DroMel_CAF1	2,765,694 – 2,765,793	- - - - - - - - -	965	2,765,694 – 2,765,793	+	6	101	78.49	-1.98	0.58	0.831155
509	2R_DroMel_CAF1	2,768,856 – 2,768,949	- - - - - - - - -	966	2,768,856 – 2,768,949	-	3	111	81.33	-1.28	0.84	0.632141
510	2R_DroMel_CAF1	2,770,943 – 2,771,038	- - - "knownCDS=Parent=FBtr0089022;Name=CG1850-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1850-RA" - - - - -	967	2,770,943 – 2,771,038	+	6	97	78.89	-1.64	0.63	0.731784
511	2R_DroMel_CAF1	2,773,351 – 2,773,441	- - - - - - - - -	968	2,773,351 – 2,773,441	+	6	90	82.19	-1.44	0.67	0.500000
512	2R_DroMel_CAF1	2,783,274 – 2,783,377	- - - - - - - - -	969	2,783,274 – 2,783,377	+	6	112	81.19	-1.69	0.68	0.699364
513	2R_DroMel_CAF1	2,790,292 – 2,790,393	- - - - - - - - -	970	2,790,292 – 2,790,393	+	5	101	89.00	-2.42	0.87	0.997097
514	2R_DroMel_CAF1	2,791,010 – 2,791,106	- - "RNAmicro=f:2791010_t:2791111_strand:+_p:0.764632" "knownCDS=Parent=FBtr0088961;Name=Incenp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12165-RA" - - - - -	971	2,791,010 – 2,791,106	-	6	102	70.55	-1.12	0.62	0.552029
515	2R_DroMel_CAF1	2,793,482 – 2,793,610	- - - - - - - - -	972	2,793,482 – 2,793,573	+	5	96	93.12	-1.47	0.88	0.904267
				973	2,793,482 – 2,793,573	-	5	96	93.12	-1.19	0.93	0.745634
				974	2,793,517 – 2,793,610	+	4	98	87.78	-1.37	0.76	0.505315
516	2R_DroMel_CAF1	2,795,789 – 2,795,896	- - - - - - - - -	975	2,795,789 – 2,795,896	+	6	107	87.34	-2.26	0.79	0.617161
517	2R_DroMel_CAF1	2,796,287 – 2,796,487	- - - - - - - - -	976	2,796,287 – 2,796,387	+	5	109	82.76	-2.52	0.59	0.887025
				977	2,796,287 – 2,796,387	-	5	109	82.76	-2.02	0.55	0.510044
				978	2,796,321 – 2,796,414	-	5	96	80.79	-1.63	0.65	0.546465
				979	2,796,387 – 2,796,487	+	5	106	88.66	-1.81	0.80	0.850324
				980	2,796,387 – 2,796,487	-	5	106	88.66	-1.99	0.72	0.719820
518	2R_DroMel_CAF1	2,798,097 – 2,798,206	- - - - - - - - -	981	2,798,097 – 2,798,206	+	4	113	84.23	-2.58	0.72	0.968830
519	2R_DroMel_CAF1	2,800,331 – 2,800,441	- - - - - - - - -	982	2,800,331 – 2,800,441	+	5	119	84.11	-1.92	0.78	0.840066
520	2R_DroMel_CAF1	2,800,660 – 2,800,768	- - - - - - - - -	983	2,800,660 – 2,800,768	+	6	120	92.08	-1.79	0.85	0.751995
521	2R_DroMel_CAF1	2,801,113 – 2,801,228	- - - - - - - - -	984	2,801,113 – 2,801,228	+	6	120	66.69	-1.40	0.50	0.585852
521	2R_DroMel_CAF1	2,801,113 – 2,801,228	- - - - - - - - -	985	2,801,113 – 2,801,228	-	6	120	66.69	-1.43	0.48	0.573461
522	2R_DroMel_CAF1	2,803,230 – 2,803,336	- - - - - - - - -	986	2,803,230 – 2,803,336	-	6	118	77.94	-1.92	0.61	0.885328
523	2R_DroMel_CAF1	2,803,846 – 2,803,936	- - - - - - - - -	987	2,803,846 – 2,803,936	-	5	92	90.42	-2.11	0.87	0.993554
524	2R_DroMel_CAF1	2,808,036 – 2,808,126	- - - "knownCDS=Parent=FBtr0088962;Name=pwn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11101-RA" - - - - -	988	2,808,036 – 2,808,126	+	6	108	76.44	-1.34	0.62	0.574448
525	2R_DroMel_CAF1	2,808,967 – 2,809,075	- - - "knownCDS=Parent=FBtr0088962;Name=pwn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11101-RA" - - - - -	989	2,808,967 – 2,809,075	+	6	117	79.75	-2.19	0.57	0.834281
526	2R_DroMel_CAF1	2,810,341 – 2,810,437	- - - - - - - - -	990	2,810,341 – 2,810,437	-	3	115	67.07	-1.85	0.47	0.524626
527	2R_DroMel_CAF1	2,811,798 – 2,811,904	- - - - - - - - -	991	2,811,798 – 2,811,904	-	6	106	74.69	-1.23	0.78	0.922613
528	2R_DroMel_CAF1	2,814,829 – 2,814,933	- - - - - - - - -	992	2,814,829 – 2,814,933	+	4	104	86.38	-1.58	0.69	0.582439
529	2R_DroMel_CAF1	2,815,233 – 2,815,349	- - - - - - - - -	993	2,815,233 – 2,815,349	-	5	119	67.36	-1.67	0.42	0.513279
530	2R_DroMel_CAF1	2,818,479 – 2,818,573	- - - - - - - - -	994	2,818,479 – 2,818,573	+	5	95	78.14	-2.25	0.66	0.972567
530	2R_DroMel_CAF1	2,818,479 – 2,818,573	- - - - - - - - -	995	2,818,479 – 2,818,573	-	5	95	78.14	-1.84	0.52	0.582817
531	2R_DroMel_CAF1	2,818,613 – 2,818,715	- - - "knownCDS=texon1062;Parent=CG_NCBI_GNO_32179620, CG_DGIL_SNO_28354722" - - - - -	996	2,818,613 – 2,818,715	-	6	114	72.77	-1.44	0.62	0.823857
532	2R_DroMel_CAF1	2,824,585 – 2,824,705	- - - "knownCDS=Parent=FBtr0088963;Name=CG12164-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12164-RA" - - - - -	997	2,824,585 – 2,824,705	+	6	120	94.56	-1.96	0.85	0.813314
533	2R_DroMel_CAF1	2,825,740 – 2,825,869	- - - - - - - - -	998	2,825,740 – 2,825,854	-	5	114	84.12	-2.98	0.72	0.988782
533	2R_DroMel_CAF1	2,825,740 – 2,825,869	- - - - - - - - -	999	2,825,777 – 2,825,869	+	4	92	92.57	-3.23	0.77	0.882450
534	2R_DroMel_CAF1	2,831,687 – 2,831,777	- - - - - - - - -	1000	2,831,687 – 2,831,777	-	4	90	69.04	-3.78	0.79	0.999985
535	2R_DroMel_CAF1	2,833,399 – 2,833,490	- - - "knownCDS=Parent=FBtr0089020;Name=Dscam-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17800-RE" - - - - -	1001	2,833,399 – 2,833,490	+	5	109	77.87	-2.55	0.57	0.988845
536	2R_DroMel_CAF1	2,834,371 – 2,834,551	- - - "knownCDS=Parent=FBtr0089017, FBtr0089019;Name=Dscam-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17800-RB, FlyBase+Annotation+IDs:CG17800-RD" - - - - -	1002	2,834,371 – 2,834,491	+	6	120	90.72	-1.58	0.86	0.657510
536	2R_DroMel_CAF1	2,834,371 – 2,834,551		1003	2,834,451 – 2,834,551	+	6	105	78.06	-1.44	0.70	0.822149
537	2R_DroMel_CAF1	2,836,282 – 2,836,380	- - - - - - - - -	1004	2,836,282 – 2,836,380	+	6	101	80.29	-2.34	0.60	0.869183
537	2R_DroMel_CAF1	2,836,282 – 2,836,380	- - - - - - - - -	1005	2,836,282 – 2,836,380	-	6	101	80.29	-3.31	0.52	0.961123
538	2R_DroMel_CAF1	2,837,237 – 2,837,336	- - - - - - - - -	1006	2,837,237 – 2,837,336	-	6	99	81.08	-2.12	0.77	0.894495
539	2R_DroMel_CAF1	2,840,925 – 2,841,021	- - - - - - - - -	1007	2,840,925 – 2,841,021	-	6	110	74.44	-2.59	0.24	0.696742
540	2R_DroMel_CAF1	2,852,213 – 2,852,309	- - - - - - - - -	1008	2,852,213 – 2,852,309	+	6	96	78.69	-1.44	0.70	0.782934
541	2R_DroMel_CAF1	2,853,134 – 2,853,237	- - - "knownCDS=texon10408;Parent=CG_RGUI_GID_mRNA_40002458, CG_DGIL_SNO_28354728, CG_BATZ_CON_47002869" - - - - -	1009	2,853,134 – 2,853,237	-	6	111	79.94	-1.58	0.62	0.602021
542	2R_DroMel_CAF1	2,858,435 – 2,858,546	- - - "knownCDS=Parent=FBtr0088965;Name=CG30501-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30501-RA" - - - - -	1010	2,858,435 – 2,858,546	-	6	112	80.23	-1.59	0.70	0.758385
543	2R_DroMel_CAF1	2,859,568 – 2,859,673	- - - - - - - - -	1011	2,859,568 – 2,859,673	-	6	109	74.56	-1.89	0.47	0.707578
544	2R_DroMel_CAF1	2,862,013 – 2,862,234	- - - - - - - - -	1012	2,862,013 – 2,862,133	-	6	120	78.55	-1.51	0.62	0.641333
				1013	2,862,053 – 2,862,165	+	6	117	72.96	-1.62	0.54	0.726000
				1014	2,862,053 – 2,862,165	-	6	117	72.96	-1.02	0.67	0.606930
				1015	2,862,133 – 2,862,234	+	6	107	78.32	-2.07	0.52	0.745862
545	2R_DroMel_CAF1	2,862,852 – 2,862,947	- - - - - - - - -	1016	2,862,852 – 2,862,947	-	6	102	78.46	-2.76	0.58	0.975465
546	2R_DroMel_CAF1	2,863,551 – 2,863,693	- - - - - - - - -	1017	2,863,551 – 2,863,663	+	6	115	75.75	-1.49	0.59	0.637786
546	2R_DroMel_CAF1	2,863,551 – 2,863,693	- - - - - - - - -	1018	2,863,591 – 2,863,693	+	6	105	68.48	-1.24	0.69	0.898927
547	2R_DroMel_CAF1	2,865,410 – 2,865,528	- - - - - - - - -	1019	2,865,410 – 2,865,528	+	6	120	76.43	-1.31	0.62	0.580633
548	2R_DroMel_CAF1	2,866,562 – 2,866,654	- - - - - - - - -	1020	2,866,562 – 2,866,654	+	6	100	79.37	-1.20	0.67	0.535690
549	2R_DroMel_CAF1	2,867,475 – 2,867,578	- - - - - - - - -	1021	2,867,475 – 2,867,578	+	6	113	84.64	-2.17	0.75	0.649678
550	2R_DroMel_CAF1	2,870,075 – 2,870,165	- - - - - - - - -	1022	2,870,075 – 2,870,165	+	6	94	81.18	-1.50	0.74	0.700468
551	2R_DroMel_CAF1	2,891,756 – 2,891,857	- - - - - - - - -	1023	2,891,756 – 2,891,857	-	5	107	71.33	-1.52	0.74	0.972286
552	2R_DroMel_CAF1	2,893,564 – 2,893,655	- - - - - - - - -	1024	2,893,564 – 2,893,655	-	5	97	86.12	-2.30	0.60	0.521851
553	2R_DroMel_CAF1	2,896,564 – 2,896,705	- - - "knownCDS=Parent=FBtr0089015;Name=cos-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1708-RA" - - - - -	1025	2,896,564 – 2,896,675	+	6	111	77.12	-2.12	0.57	0.929779
553	2R_DroMel_CAF1	2,896,564 – 2,896,705		1026	2,896,604 – 2,896,705	-	6	101	81.19	-1.87	0.57	0.525422
554	2R_DroMel_CAF1	2,897,220 – 2,897,334	- - - "knownCDS=Parent=FBtr0089015;Name=cos-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1708-RA" - - - - -	1027	2,897,220 – 2,897,334	-	6	118	78.20	-1.53	0.67	0.798408
555	2R_DroMel_CAF1	2,900,380 – 2,900,480	- - - - - - - - -	1028	2,900,380 – 2,900,480	+	3	116	71.77	-2.52	0.56	0.998004
556	2R_DroMel_CAF1	2,901,231 – 2,901,341	- - - "knownCDS=Parent=FBtr0088966;Name=CG11107-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11107-RA" - - - - -	1029	2,901,231 – 2,901,341	+	6	114	80.90	-1.28	0.75	0.616471
557	2R_DroMel_CAF1	2,907,020 – 2,907,139	- - - - - - - - -	1030	2,907,020 – 2,907,139	+	4	119	78.30	-1.84	0.73	0.884347
558	2R_DroMel_CAF1	2,907,698 – 2,907,798	- - - - - - - - -	1031	2,907,698 – 2,907,798	+	6	104	70.97	-1.69	0.45	0.603656
559	2R_DroMel_CAF1	2,911,350 – 2,911,464	- - - - - - - - -	1032	2,911,350 – 2,911,464	-	3	114	83.33	-2.11	0.87	0.940521
560	2R_DroMel_CAF1	2,912,486 – 2,912,582	- - - - - - - - -	1033	2,912,486 – 2,912,582	-	5	116	76.57	-1.80	0.50	0.577296
561	2R_DroMel_CAF1	2,913,745 – 2,913,862	- - - "knownCDS=Parent=FBtr0088969;Name=CG11113-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11113-RA" - - - - -	1034	2,913,745 – 2,913,862	+	4	117	91.88	-1.88	0.90	0.914803
562	2R_DroMel_CAF1	2,914,803 – 2,914,923	- - - "knownCDS=Parent=FBtr0088968;Name=CG11112-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11112-RB" - - - - -	1035	2,914,803 – 2,914,923	+	5	120	91.92	-1.59	0.82	0.796311
563	2R_DroMel_CAF1	2,916,840 – 2,916,936	- - - - - - - - -	1036	2,916,840 – 2,916,936	+	6	100	79.71	-1.84	0.56	0.595321
564	2R_DroMel_CAF1	2,919,650 – 2,919,758	- - - - - - - - -	1037	2,919,650 – 2,919,758	+	5	120	77.99	-2.25	0.47	0.915151
565	2R_DroMel_CAF1	2,923,931 – 2,924,155	- - - - - - - - -	1038	2,923,931 – 2,924,040	+	4	109	89.51	-1.54	0.78	0.604304
565	2R_DroMel_CAF1	2,923,931 – 2,924,155	- - - - - - - - -	1039	2,924,040 – 2,924,155	+	5	120	85.31	-2.49	0.73	0.946313
566	2R_DroMel_CAF1	2,928,731 – 2,928,827	- - - - - - - - -	1040	2,928,731 – 2,928,827	-	4	96	92.88	-1.39	0.86	0.500000
567	2R_DroMel_CAF1	2,930,350 – 2,930,454	- - - - - - - - -	1041	2,930,350 – 2,930,454	+	5	115	77.28	-1.83	0.48	0.556067
568	2R_DroMel_CAF1	2,938,216 – 2,938,324	- - - - - - - - -	1042	2,938,216 – 2,938,324	-	4	108	80.95	-1.84	0.78	0.855199
569	2R_DroMel_CAF1	2,945,852 – 2,945,972	- - - "knownCDS=Parent=FBtr0088970;Name=so-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11121-RA" - - - - -	1043	2,945,852 – 2,945,972	+	6	120	92.26	-1.42	0.91	0.857783
570	2R_DroMel_CAF1	2,952,355 – 2,952,460	- - - - - - - - -	1044	2,952,355 – 2,952,460	-	3	119	77.62	-1.51	0.64	0.507157
571	2R_DroMel_CAF1	2,954,150 – 2,954,270	- - - "knownCDS=Parent=FBtr0088971;Name=CG11123-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11123-RA" - - - - -	1045	2,954,150 – 2,954,270	-	6	120	78.11	-1.49	0.64	0.728526
572	2R_DroMel_CAF1	2,956,144 – 2,956,248	- - - "knownCDS=Parent=FBtr0089003;Name=CG30503-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30503-RA" - - - - -	1046	2,956,144 – 2,956,248	+	6	104	81.83	-1.45	0.79	0.656664
573	2R_DroMel_CAF1	2,956,679 – 2,956,799	- - - - - - - - -	1047	2,956,679 – 2,956,799	+	4	120	76.67	-2.26	0.67	0.986236
573	2R_DroMel_CAF1	2,956,679 – 2,956,799	- - - - - - - - -	1048	2,956,679 – 2,956,799	-	4	120	76.67	-2.85	0.66	0.999302
574	2R_DroMel_CAF1	2,957,360 – 2,957,458	- - - - - - - - -	1049	2,957,360 – 2,957,458	-	6	117	71.51	-1.80	0.50	0.854102
575	2R_DroMel_CAF1	2,959,238 – 2,959,378	- - - - - - - - -	1050	2,959,238 – 2,959,345	+	5	107	79.20	-1.54	0.66	0.521705
				1051	2,959,238 – 2,959,345	-	5	107	79.20	-1.57	0.74	0.734189
				1052	2,959,278 – 2,959,378	-	5	101	92.81	-1.97	0.87	0.989442
576	2R_DroMel_CAF1	2,961,099 – 2,961,193	- - - - - - - - -	1053	2,961,099 – 2,961,193	+	6	104	75.45	-1.60	0.62	0.847419
577	2R_DroMel_CAF1	2,964,633 – 2,964,726	- - - - - - - - -	1054	2,964,633 – 2,964,726	-	3	93	94.98	-2.20	0.96	0.938647
578	2R_DroMel_CAF1	2,967,716 – 2,967,836	- - - "knownCDS=Parent=FBtr0089329;Name=Inos-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11143-RA" - - - - -	1055	2,967,716 – 2,967,836	-	6	120	81.28	-1.30	0.70	0.546106
579	2R_DroMel_CAF1	2,974,914 – 2,975,015	- - - - - - - - -	1056	2,974,914 – 2,975,015	+	4	101	87.62	-2.37	0.79	0.946585
580	2R_DroMel_CAF1	2,978,102 – 2,978,209	- - - "knownCDS=Parent=FBtr0088997;Name=p47-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11139-RA" - - - - -	1057	2,978,102 – 2,978,209	+	5	107	84.69	-1.68	0.77	0.658471
581	2R_DroMel_CAF1	2,979,676 – 2,979,775	- - - - - - - - -	1058	2,979,676 – 2,979,775	+	5	103	78.72	-2.50	0.56	0.977941
581	2R_DroMel_CAF1	2,979,676 – 2,979,775	- - - - - - - - -	1059	2,979,676 – 2,979,775	-	5	103	78.72	-2.31	0.57	0.947431
582	2R_DroMel_CAF1	2,980,256 – 2,980,358	- - - "knownCDS=Parent=FBtr0088988, FBtr0088989, FBtr0088990;Name=Aldh-III-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11140-RF, FlyBase+Annotation+IDs:CG11140-RH, FlyBase+Annotation+IDs:CG11140-RG" - - - - -	1060	2,980,256 – 2,980,358	+	6	120	75.80	-2.02	0.61	0.954873
583	2R_DroMel_CAF1	2,982,135 – 2,982,244	- - - - - - - - -	1061	2,982,135 – 2,982,244	+	3	109	86.58	-1.45	0.91	0.704669
584	2R_DroMel_CAF1	2,984,846 – 2,984,949	- - - - - - - - -	1062	2,984,846 – 2,984,949	+	5	120	79.41	-2.04	0.64	0.886797
585	2R_DroMel_CAF1	2,988,911 – 2,989,012	- - - - - - - - -	1063	2,988,911 – 2,989,012	+	6	120	80.50	-1.74	0.62	0.664900
586	2R_DroMel_CAF1	2,995,294 – 2,995,409	- - - "knownCDS=Parent=FBtr0088985, FBtr0088986;Name=dpld-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1624-RC, FlyBase+Annotation+IDs:CG1624-RA" - - - - -	1064	2,995,294 – 2,995,409	+	6	116	73.23	-1.79	0.63	0.958327
587	2R_DroMel_CAF1	2,997,442 – 2,997,552	- - - "knownCDS=Parent=FBtr0088985, FBtr0088986;Name=dpld-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1624-RC, FlyBase+Annotation+IDs:CG1624-RA" - - - - -	1065	2,997,442 – 2,997,552	-	6	111	81.75	-1.43	0.70	0.569362
588	2R_DroMel_CAF1	3,001,727 – 3,001,831	- - - - - - - - -	1066	3,001,727 – 3,001,831	-	5	109	76.72	-1.69	0.55	0.507985
589	2R_DroMel_CAF1	3,006,199 – 3,006,290	- - - "knownCDS=Parent=FBtr0088983;Name=CG1620-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1620-RA" - - - - -	1067	3,006,199 – 3,006,290	-	6	91	77.36	-1.69	0.61	0.794474
590	2R_DroMel_CAF1	3,013,884 – 3,013,993	- - - "knownCDS=Parent=FBtr0089744, FBtr0089745;Name=didum-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2146-RB, FlyBase+Annotation+IDs:CG2146-RA" - - - - -	1068	3,013,884 – 3,013,993	+	6	117	75.60	-1.21	0.71	0.806597
590	2R_DroMel_CAF1	3,013,884 – 3,013,993		1069	3,013,884 – 3,013,993	-	6	117	75.60	-1.89	0.60	0.930021
591	2R_DroMel_CAF1	3,014,033 – 3,014,153	- - - "knownCDS=Parent=FBtr0089743;Name=didum-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2146-RC" - - - - -	1070	3,014,033 – 3,014,153	+	6	120	81.50	-2.12	0.59	0.656964
592	2R_DroMel_CAF1	3,024,572 – 3,024,665	- - - - - - - - -	1071	3,024,572 – 3,024,665	-	4	93	85.13	-1.68	0.86	0.774521
593	2R_DroMel_CAF1	3,028,813 – 3,028,910	- - - "knownCDS=Parent=FBtr0088960;Name=CG1602-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1602-RA" - - - - -	1072	3,028,813 – 3,028,910	+	6	100	81.97	-1.69	0.70	0.660053
594	2R_DroMel_CAF1	3,032,871 – 3,032,984	- - - "knownCDS=Parent=FBtr0088904;Name=CG2144-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2144-RA" - - - - -	1073	3,032,871 – 3,032,984	-	6	113	81.65	-1.22	0.73	0.511428
595	2R_DroMel_CAF1	3,033,588 – 3,033,692	- - - "knownCDS=Parent=FBtr0088904;Name=CG2144-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2144-RA" - - - - -	1074	3,033,588 – 3,033,692	+	6	113	79.65	-2.22	0.69	0.930770
595	2R_DroMel_CAF1	3,033,588 – 3,033,692		1075	3,033,588 – 3,033,692	-	6	113	79.65	-1.55	0.64	0.666431
596	2R_DroMel_CAF1	3,034,749 – 3,034,885	- - - "knownCDS=Parent=FBtr0088959;Name=Orc1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10667-RA" - - - - -	1076	3,034,749 – 3,034,869	+	6	120	82.61	-2.08	0.68	0.695396
				1077	3,034,749 – 3,034,869	-	6	120	82.61	-1.67	0.80	0.708350
				1078	3,034,789 – 3,034,885	+	6	111	82.44	-2.32	0.72	0.825404
				1079	3,034,789 – 3,034,885	-	6	111	82.44	-2.35	0.76	0.864816
597	2R_DroMel_CAF1	3,044,956 – 3,045,055	- - - - - - - - -	1080	3,044,956 – 3,045,055	-	5	104	81.83	-2.00	0.66	0.805194
598	2R_DroMel_CAF1	3,056,117 – 3,056,208	- - - - - - - - -	1081	3,056,117 – 3,056,208	-	5	104	78.20	-1.63	0.70	0.767516
599	2R_DroMel_CAF1	3,060,274 – 3,060,385	- - - - - - - - -	1082	3,060,274 – 3,060,385	+	4	111	84.74	-1.55	0.74	0.603776
600	2R_DroMel_CAF1	3,064,215 – 3,064,352	- - - - - - - - -	1083	3,064,215 – 3,064,316	-	4	111	83.18	-1.99	0.60	0.630420
600	2R_DroMel_CAF1	3,064,215 – 3,064,352	- - - - - - - - -	1084	3,064,250 – 3,064,352	-	4	116	72.69	-2.26	0.54	0.975892
601	2R_DroMel_CAF1	3,066,268 – 3,066,443	- - - - - - - - -	1085	3,066,268 – 3,066,376	-	6	120	82.71	-1.79	0.69	0.619524
				1086	3,066,308 – 3,066,410	-	5	120	73.14	-2.04	0.37	0.924869
				1087	3,066,348 – 3,066,443	+	5	115	70.88	-1.94	0.53	0.938354
				1088	3,066,348 – 3,066,443	-	5	115	70.88	-1.82	0.34	0.735440
602	2R_DroMel_CAF1	3,069,869 – 3,069,999	- - - "knownCDS=Parent=FBtr0088908;Name=Corin-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2105-RA" - - - - -	1089	3,069,869 – 3,069,962	+	6	93	85.59	-2.62	0.75	0.697137
				1090	3,069,909 – 3,069,999	+	6	90	81.78	-2.42	0.66	0.836540
				1091	3,069,909 – 3,069,999	-	6	90	81.78	-1.45	0.67	0.537056
603	2R_DroMel_CAF1	3,081,090 – 3,081,193	- - - "knownCDS=Parent=FBtr0088910;Name=CG2093-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2093-RA" - - - - -	1092	3,081,090 – 3,081,193	-	6	108	74.76	-1.40	0.63	0.759576
604	2R_DroMel_CAF1	3,082,158 – 3,082,255	- - - "knownCDS=Parent=FBtr0088910;Name=CG2093-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2093-RA" - - - - -	1093	3,082,158 – 3,082,255	+	6	103	76.29	-1.47	0.67	0.850861
605	2R_DroMel_CAF1	3,089,247 – 3,089,365	- - - "knownCDS=Parent=FBtr0088910;Name=CG2093-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2093-RA" - - - - -	1094	3,089,247 – 3,089,365	-	6	118	73.22	-2.02	0.43	0.827632
606	2R_DroMel_CAF1	3,091,365 – 3,091,463	- - - - - - - - -	1095	3,091,365 – 3,091,463	-	6	99	81.00	-1.92	0.68	0.802973
607	2R_DroMel_CAF1	3,094,533 – 3,094,638	- - - "knownCDS=Parent=FBtr0088952;Name=blow-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1363-RA" - - - - -	1096	3,094,533 – 3,094,638	-	5	105	77.98	-1.52	0.72	0.720835
608	2R_DroMel_CAF1	3,100,311 – 3,100,424	- - - "knownCDS=Parent=FBtr0088951;Name=CG1360-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1360-RA" - - - - -	1097	3,100,311 – 3,100,424	+	6	113	77.58	-1.59	0.62	0.750924
609	2R_DroMel_CAF1	3,101,030 – 3,101,138	- - - - - - - - -	1098	3,101,030 – 3,101,138	+	6	113	70.67	-1.44	0.60	0.811730
610	2R_DroMel_CAF1	3,101,852 – 3,102,012	- - - - - - - - -	1099	3,101,852 – 3,101,972	-	5	120	84.89	-2.30	0.74	0.931517
610	2R_DroMel_CAF1	3,101,852 – 3,102,012	- - - - - - - - -	1100	3,101,892 – 3,102,012	-	5	120	84.72	-2.25	0.68	0.839604
611	2R_DroMel_CAF1	3,103,781 – 3,103,885	- - - "knownCDS=Parent=FBtr0088912, FBtr0088911, FBtr0100216;Name=scra-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2092-RB, FlyBase+Annotation+IDs:CG2092-RA, FlyBase+Annotation+IDs:CG2092-RC" - - - - -	1101	3,103,781 – 3,103,885	+	6	104	81.60	-1.71	0.65	0.616558
612	2R_DroMel_CAF1	3,111,482 – 3,111,581	- - - - - - - - -	1102	3,111,482 – 3,111,581	+	5	105	80.26	-2.26	0.67	0.951690
612	2R_DroMel_CAF1	3,111,482 – 3,111,581	- - - - - - - - -	1103	3,111,482 – 3,111,581	-	5	105	80.26	-1.63	0.69	0.641952
613	2R_DroMel_CAF1	3,111,924 – 3,112,028	- - - - - - - - -	1104	3,111,924 – 3,112,028	+	3	108	86.56	-0.73	0.97	0.654957
614	2R_DroMel_CAF1	3,114,000 – 3,114,096	- - - - - - - - -	1105	3,114,000 – 3,114,096	+	6	107	79.87	-1.60	0.71	0.805717
615	2R_DroMel_CAF1	3,116,756 – 3,116,847	- - - - - - - - -	1106	3,116,756 – 3,116,847	+	5	92	83.00	-1.73	0.74	0.695577
616	2R_DroMel_CAF1	3,116,965 – 3,117,063	- - - - - - - - -	1107	3,116,965 – 3,117,063	+	5	98	89.64	-1.41	0.85	0.685206
617	2R_DroMel_CAF1	3,132,023 – 3,132,113	- - - - - - - - -	1108	3,132,023 – 3,132,113	+	5	90	72.22	-2.11	0.41	0.955618
618	2R_DroMel_CAF1	3,135,628 – 3,135,722	- - - - - - - - -	1109	3,135,628 – 3,135,722	+	3	95	85.87	-1.92	0.73	0.557602
619	2R_DroMel_CAF1	3,137,530 – 3,137,623	- - - - - - - - -	1110	3,137,530 – 3,137,623	+	4	101	85.22	-1.78	0.66	0.644439
620	2R_DroMel_CAF1	3,139,985 – 3,140,081	- - - - - - - - -	1111	3,139,985 – 3,140,081	-	4	96	93.89	-2.90	0.90	0.989316
621	2R_DroMel_CAF1	3,142,762 – 3,142,857	- - - - - - - - -	1112	3,142,762 – 3,142,857	-	5	96	85.85	-1.56	0.72	0.500000
622	2R_DroMel_CAF1	3,146,192 – 3,146,310	- - - - - - - - -	1113	3,146,192 – 3,146,310	-	4	120	79.13	-2.10	0.55	0.659043
623	2R_DroMel_CAF1	3,147,141 – 3,147,289	- - - - - - - - -	1114	3,147,141 – 3,147,249	+	6	111	83.52	-3.02	0.76	0.902057
				1115	3,147,141 – 3,147,249	-	6	111	83.52	-2.41	0.67	0.662020
				1116	3,147,177 – 3,147,289	+	6	114	84.60	-2.28	0.85	0.908621
624	2R_DroMel_CAF1	3,150,115 – 3,150,214	- - - "knownCDS=Parent=FBtr0088917;Name=CG30492-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30492-RD" - - - - -	1117	3,150,115 – 3,150,214	+	6	103	86.00	-1.49	0.85	0.540530
625	2R_DroMel_CAF1	3,150,632 – 3,150,732	- - - "knownCDS=Parent=FBtr0088913, FBtr0088914, FBtr0088915, FBtr0088916, FBtr0088917;Name=CG30492-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30492-RB, FlyBase+Annotation+IDs:CG30492-RA, FlyBase+Annotation+IDs:CG30492-RC, FlyBase+Annotation+IDs:CG30492-RE, FlyBase+Annotation+IDs:CG30492-RD" - - - - -	1118	3,150,632 – 3,150,732	+	6	109	76.24	-1.31	0.64	0.659470
626	2R_DroMel_CAF1	3,151,560 – 3,151,677	- - - "knownCDS=Parent=FBtr0088913, FBtr0088914, FBtr0088915, FBtr0088916, FBtr0088917;Name=CG30492-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30492-RB, FlyBase+Annotation+IDs:CG30492-RA, FlyBase+Annotation+IDs:CG30492-RC, FlyBase+Annotation+IDs:CG30492-RE, FlyBase+Annotation+IDs:CG30492-RD" - - - - -	1119	3,151,560 – 3,151,677	-	6	120	83.16	-1.68	0.69	0.524152
627	2R_DroMel_CAF1	3,152,264 – 3,152,395	- - - "knownCDS=Parent=FBtr0088913, FBtr0088914, FBtr0088915, FBtr0088916, FBtr0088917;Name=CG30492-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30492-RB, FlyBase+Annotation+IDs:CG30492-RA, FlyBase+Annotation+IDs:CG30492-RC, FlyBase+Annotation+IDs:CG30492-RE, FlyBase+Annotation+IDs:CG30492-RD" - - - - -	1120	3,152,264 – 3,152,357	-	6	93	81.86	-1.43	0.71	0.583996
				1121	3,152,304 – 3,152,395	+	6	91	80.07	-1.63	0.72	0.811719
				1122	3,152,304 – 3,152,395	-	6	91	80.07	-1.71	0.65	0.742493
628	2R_DroMel_CAF1	3,167,339 – 3,167,457	- - - - - - - - -	1123	3,167,339 – 3,167,457	-	6	119	78.13	-1.12	0.67	0.500000
629	2R_DroMel_CAF1	3,168,396 – 3,168,506	- - - "knownCDS=Parent=FBtr0088919;Name=CG30491-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30491-RA" - - - - -	1124	3,168,396 – 3,168,506	-	6	113	79.55	-1.55	0.59	0.511707
630	2R_DroMel_CAF1	3,171,722 – 3,171,882	- - - "knownCDS=Parent=FBtr0088945;Name=Gr43b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1339-RA" - - - - -	1125	3,171,722 – 3,171,842	-	5	120	93.42	-2.13	0.83	0.984631
630	2R_DroMel_CAF1	3,171,722 – 3,171,882		1126	3,171,762 – 3,171,882	+	5	120	94.00	-1.22	0.91	0.735884
631	2R_DroMel_CAF1	3,175,659 – 3,175,774	- - - - - - - - -	1127	3,175,659 – 3,175,774	-	3	120	83.99	-1.84	0.74	0.627394
632	2R_DroMel_CAF1	3,176,175 – 3,176,295	- - - "knownCDS=Parent=FBtr0088922;Name=CG2065-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2065-RA" - - - - -	1128	3,176,175 – 3,176,295	+	4	120	83.61	-2.28	0.66	0.897209
632	2R_DroMel_CAF1	3,176,175 – 3,176,295		1129	3,176,175 – 3,176,295	-	4	120	83.61	-2.77	0.66	0.967781
633	2R_DroMel_CAF1	3,182,148 – 3,182,245	- - - - - - - - -	1130	3,182,148 – 3,182,245	+	3	120	76.33	-2.32	0.59	0.970435
634	2R_DroMel_CAF1	3,195,773 – 3,195,882	- - - "knownCDS=Parent=FBtr0088939;Name=CG1399-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1399-RB" - - - - -	1131	3,195,773 – 3,195,882	+	6	120	80.78	-1.18	0.80	0.584231
635	2R_DroMel_CAF1	3,196,032 – 3,196,145	- - - "knownCDS=Parent=FBtr0088939;Name=CG1399-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1399-RB" - - - - -	1132	3,196,032 – 3,196,145	-	6	113	77.36	-1.38	0.66	0.747913
636	2R_DroMel_CAF1	3,196,907 – 3,196,999	- - - - - - - - -	1133	3,196,907 – 3,196,999	-	6	104	75.24	-1.33	0.61	0.569953
637	2R_DroMel_CAF1	3,197,602 – 3,197,697	- - - - - - - - -	1134	3,197,602 – 3,197,697	+	6	101	76.81	-2.85	0.43	0.975323
638	2R_DroMel_CAF1	3,199,877 – 3,199,968	- - - - - - - - -	1135	3,199,877 – 3,199,968	+	5	99	78.68	-2.90	0.79	0.997922
638	2R_DroMel_CAF1	3,199,877 – 3,199,968	- - - - - - - - -	1136	3,199,877 – 3,199,968	-	5	99	78.68	-2.83	0.76	0.997457
639	2R_DroMel_CAF1	3,203,328 – 3,203,423	- - - - - - - - -	1137	3,203,328 – 3,203,423	-	6	108	73.45	-1.81	0.46	0.658368
640	2R_DroMel_CAF1	3,216,128 – 3,216,236	- - - - - - - - -	1138	3,216,128 – 3,216,236	+	6	111	83.98	-1.91	0.71	0.554143
641	2R_DroMel_CAF1	3,216,640 – 3,216,740	- - - - - - - - -	1139	3,216,640 – 3,216,740	-	6	100	85.80	-1.91	0.77	0.512976
642	2R_DroMel_CAF1	3,218,544 – 3,218,650	- - - "knownCDS=Parent=FBtr0088938;Name=tor-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1389-RA" - - - - -	1140	3,218,544 – 3,218,650	+	6	111	76.84	-1.81	0.59	0.849574
643	2R_DroMel_CAF1	3,221,567 – 3,221,666	- - - - - - - - -	1141	3,221,567 – 3,221,666	-	4	119	84.88	-1.45	0.70	0.511180
644	2R_DroMel_CAF1	3,222,009 – 3,222,124	- - - - - - - - -	1142	3,222,009 – 3,222,124	+	5	115	93.13	-2.35	0.82	0.990590
644	2R_DroMel_CAF1	3,222,009 – 3,222,124	- - - - - - - - -	1143	3,222,009 – 3,222,124	-	5	115	93.13	-1.52	0.80	0.661735
645	2R_DroMel_CAF1	3,223,126 – 3,223,246	- - - "knownCDS=Parent=FBtr0088927;Name=CG1941-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1941-RA" - - - - -	1144	3,223,126 – 3,223,246	+	6	120	81.59	-2.18	0.69	0.833530
646	2R_DroMel_CAF1	3,229,672 – 3,229,798	- - - - - - - - -	1145	3,229,672 – 3,229,764	+	6	99	95.76	-0.61	1.01	0.633743
646	2R_DroMel_CAF1	3,229,672 – 3,229,798	- - - - - - - - -	1146	3,229,691 – 3,229,798	+	4	113	90.64	-1.41	0.83	0.538019
647	2R_DroMel_CAF1	3,231,023 – 3,231,153	- - - "knownCDS=Parent=FBtr0088936, FBtr0088937;Name=CG18812-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18812-RB, FlyBase+Annotation+IDs:CG18812-RA" - - - - -	1147	3,231,023 – 3,231,121	+	6	120	78.76	-1.89	0.62	0.856246
				1148	3,231,023 – 3,231,121	-	6	120	78.76	-1.55	0.81	0.886685
				1149	3,231,044 – 3,231,153	+	6	118	77.36	-1.96	0.77	0.964289
				1150	3,231,044 – 3,231,153	-	6	118	77.36	-1.48	0.75	0.902530
648	2R_DroMel_CAF1	3,232,659 – 3,232,753	- - - - - - - - -	1151	3,232,659 – 3,232,753	-	5	103	82.49	-1.99	0.66	0.769370
649	2R_DroMel_CAF1	3,234,834 – 3,234,939	- - - - - - - - -	1152	3,234,834 – 3,234,939	-	5	106	76.86	-2.27	0.53	0.962177
650	2R_DroMel_CAF1	3,235,806 – 3,235,913	- - - - - - - - -	1153	3,235,806 – 3,235,913	-	5	119	87.23	-1.42	0.80	0.500000
651	2R_DroMel_CAF1	3,236,659 – 3,236,776	- - - - - - - - -	1154	3,236,659 – 3,236,759	-	6	101	79.03	-0.91	0.79	0.517750
651	2R_DroMel_CAF1	3,236,659 – 3,236,776	- - - - - - - - -	1155	3,236,686 – 3,236,776	-	6	90	80.71	-1.68	0.75	0.808498
652	2R_DroMel_CAF1	3,243,889 – 3,243,988	- - - - - - - - -	1156	3,243,889 – 3,243,988	+	6	107	76.46	-3.18	0.51	0.995750
652	2R_DroMel_CAF1	3,243,889 – 3,243,988	- - - - - - - - -	1157	3,243,889 – 3,243,988	-	6	107	76.46	-2.36	0.54	0.966648
653	2R_DroMel_CAF1	3,245,571 – 3,245,676	- - - - - - - - -	1158	3,245,571 – 3,245,676	+	6	120	75.90	-1.69	0.51	0.507051
653	2R_DroMel_CAF1	3,245,571 – 3,245,676	- - - - - - - - -	1159	3,245,571 – 3,245,676	-	6	120	75.90	-1.50	0.61	0.734939
654	2R_DroMel_CAF1	3,251,405 – 3,251,510	- - - - - - - - -	1160	3,251,405 – 3,251,510	-	6	111	76.96	-1.16	0.77	0.821034
655	2R_DroMel_CAF1	3,264,931 – 3,265,062	- - - - - - - - -	1161	3,264,931 – 3,265,023	-	5	100	85.33	-2.34	0.75	0.937155
				1162	3,264,971 – 3,265,062	+	5	99	81.23	-2.66	0.69	0.984985
				1163	3,264,971 – 3,265,062	-	5	99	81.23	-2.11	0.50	0.604249
656	2R_DroMel_CAF1	3,271,839 – 3,271,932	- - - - - - - - -	1164	3,271,839 – 3,271,932	+	5	94	77.79	-2.21	0.35	0.888709
657	2R_DroMel_CAF1	3,274,075 – 3,274,169	- - - - - - - - -	1165	3,274,075 – 3,274,169	+	5	94	95.21	-2.08	0.81	0.928870
657	2R_DroMel_CAF1	3,274,075 – 3,274,169	- - - - - - - - -	1166	3,274,075 – 3,274,169	-	5	94	95.21	-2.39	0.81	0.973629
658	2R_DroMel_CAF1	3,282,666 – 3,282,765	- - - - - - - - -	1167	3,282,666 – 3,282,765	+	5	106	78.63	-2.35	0.53	0.945617
659	2R_DroMel_CAF1	3,284,660 – 3,284,758	- - - - - - - - -	1168	3,284,660 – 3,284,758	+	6	116	81.38	-1.61	0.74	0.728545
660	2R_DroMel_CAF1	3,285,204 – 3,285,324	- - - - - - - - -	1169	3,285,204 – 3,285,324	+	5	120	74.74	-1.98	0.45	0.854642
661	2R_DroMel_CAF1	3,287,850 – 3,287,980	- - - - - - - - -	1170	3,287,850 – 3,287,957	+	4	107	79.90	-1.80	0.73	0.813190
				1171	3,287,850 – 3,287,957	-	4	107	79.90	-1.90	0.64	0.761189
				1172	3,287,890 – 3,287,980	-	4	106	81.67	-1.83	0.72	0.795063
662	2R_DroMel_CAF1	3,295,057 – 3,295,151	- - - "knownCDS=Parent=FBtr0088931;Name=cn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1555-RA" - - - - -	1173	3,295,057 – 3,295,151	-	5	96	88.78	-1.63	0.72	0.519576
663	2R_DroMel_CAF1	3,300,245 – 3,300,360	- - - - - - - - -	1174	3,300,245 – 3,300,360	+	3	115	98.84	-1.66	0.95	0.638594
664	2R_DroMel_CAF1	3,301,991 – 3,302,107	- - - - - - - - -	1175	3,301,991 – 3,302,107	-	3	120	75.07	-1.33	0.68	0.602484
665	2R_DroMel_CAF1	3,304,049 – 3,304,169	- - - "knownCDS=Parent=FBtr0100479;Name=Gapdh1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12055-RB" - - - - -	1176	3,304,049 – 3,304,169	-	3	120	96.11	-2.56	0.87	0.857286
666	2R_DroMel_CAF1	3,304,321 – 3,304,512	- - - "knownCDS=Parent=FBtr0100479;Name=Gapdh1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12055-RB" - - - "ncRNAdb=MmuscAK158358_unclassifiable\|2e-10" -	1177	3,304,321 – 3,304,436	-	3	115	99.42	-1.53	0.98	0.641470
				1178	3,304,359 – 3,304,474	-	3	115	99.42	-3.28	1.00	0.991073
				1179	3,304,398 – 3,304,512	-	3	114	98.83	-2.94	0.99	0.987501
667	2R_DroMel_CAF1	3,304,588 – 3,304,748	- - - "knownCDS=Parent=FBtr0100479;Name=Gapdh1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12055-RB" - - - - -	1180	3,304,588 – 3,304,708	+	3	120	97.22	-1.86	0.93	0.702266
				1181	3,304,628 – 3,304,748	+	3	120	98.33	-3.27	0.99	0.991082
				1182	3,304,628 – 3,304,748	-	3	120	98.33	-2.38	0.95	0.926349
668	2R_DroMel_CAF1	3,305,465 – 3,305,564	- - - - - - - - -	1183	3,305,465 – 3,305,564	+	5	101	71.92	-1.82	0.48	0.782102
669	2R_DroMel_CAF1	3,310,772 – 3,310,873	- - - "knownCDS=Parent=FBtr0088831;Name=mus205-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1925-RA" - - - - -	1184	3,310,772 – 3,310,873	-	6	105	79.14	-1.88	0.52	0.500000
670	2R_DroMel_CAF1	3,318,647 – 3,318,747	- - - - - - - - -	1185	3,318,647 – 3,318,747	-	4	120	83.23	-1.74	0.73	0.731842
671	2R_DroMel_CAF1	3,320,137 – 3,320,234	- - - - - - - - -	1186	3,320,137 – 3,320,234	+	3	97	83.03	-1.84	0.88	0.912690
672	2R_DroMel_CAF1	3,321,061 – 3,321,177	- - - "knownCDS=Parent=FBtr0088832;Name=sax-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1891-RA" - - - - -	1187	3,321,061 – 3,321,177	+	6	120	79.08	-1.35	0.66	0.614269
673	2R_DroMel_CAF1	3,337,470 – 3,337,581	- - - "knownCDS=Parent=FBtr0088839;Name=phr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11205-RB" - - - - -	1188	3,337,470 – 3,337,581	+	5	120	74.43	-1.89	0.41	0.762151
674	2R_DroMel_CAF1	3,343,889 – 3,344,027	- - - - - - - - -	1189	3,343,889 – 3,344,009	+	4	120	82.20	-2.98	0.69	0.993711
				1190	3,343,889 – 3,344,009	-	4	120	82.20	-2.24	0.63	0.866257
				1191	3,343,929 – 3,344,027	+	4	98	89.63	-1.63	0.77	0.644343
				1192	3,343,929 – 3,344,027	-	4	98	89.63	-2.06	0.73	0.766657
675	2R_DroMel_CAF1	3,344,041 – 3,344,154	- - - - - - - - -	1193	3,344,041 – 3,344,154	+	5	120	78.84	-1.85	0.65	0.820376
676	2R_DroMel_CAF1	3,345,001 – 3,345,112	- - - "knownCDS=Parent=FBtr0088841;Name=CG12822-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12822-RA" - - - - -	1194	3,345,001 – 3,345,112	-	5	120	82.81	-2.29	0.65	0.882034
677	2R_DroMel_CAF1	3,348,858 – 3,348,978	- - - "knownCDS=Parent=FBtr0088891, FBtr0088892, FBtr0088893;Name=Dgk-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18654-RB, FlyBase+Annotation+IDs:CG18654-RA, FlyBase+Annotation+IDs:CG18654-RD" - - - - -	1195	3,348,858 – 3,348,978	-	6	120	82.00	-1.75	0.74	0.732219
678	2R_DroMel_CAF1	3,349,673 – 3,349,808	- - - - - - - - -	1196	3,349,673 – 3,349,769	+	5	101	92.04	-1.92	0.85	0.975674
				1197	3,349,673 – 3,349,769	-	5	101	92.04	-2.96	0.94	0.999979
				1198	3,349,695 – 3,349,808	-	5	118	90.96	-1.99	0.82	0.957213
679	2R_DroMel_CAF1	3,351,394 – 3,351,531	- - - - - - - - -	1199	3,351,394 – 3,351,509	-	6	118	81.32	-2.73	0.66	0.908909
				1200	3,351,433 – 3,351,531	+	6	113	81.13	-2.63	0.56	0.832667
				1201	3,351,433 – 3,351,531	-	6	113	81.13	-2.75	0.63	0.908756
680	2R_DroMel_CAF1	3,358,335 – 3,358,435	- - - - - - - - -	1202	3,358,335 – 3,358,435	+	3	100	81.00	-2.03	0.86	0.966255
680	2R_DroMel_CAF1	3,358,335 – 3,358,435	- - - - - - - - -	1203	3,358,335 – 3,358,435	-	3	100	81.00	-1.19	0.82	0.500000
681	2R_DroMel_CAF1	3,364,425 – 3,364,516	- - - - - - - - -	1204	3,364,425 – 3,364,516	+	6	115	79.39	-1.79	0.57	0.616721
682	2R_DroMel_CAF1	3,366,128 – 3,366,228	- - - - - - - - -	1205	3,366,128 – 3,366,228	-	6	106	79.80	-1.46	0.74	0.779064
683	2R_DroMel_CAF1	3,373,220 – 3,373,320	- - - - - - - - -	1206	3,373,220 – 3,373,320	+	5	104	84.29	-1.82	0.77	0.773626
684	2R_DroMel_CAF1	3,387,839 – 3,387,932	- - - - - - - - -	1207	3,387,839 – 3,387,932	+	4	93	86.74	-1.67	0.67	0.580852
685	2R_DroMel_CAF1	3,393,946 – 3,394,043	- - - - - - - - -	1208	3,393,946 – 3,394,043	-	5	113	65.55	-3.41	0.35	0.998334
686	2R_DroMel_CAF1	3,397,415 – 3,397,506	- - - - - - - - -	1209	3,397,415 – 3,397,506	+	6	92	81.30	-1.51	0.65	0.542405
687	2R_DroMel_CAF1	3,399,225 – 3,399,333	- - - - - - - - -	1210	3,399,225 – 3,399,333	+	6	110	81.87	-1.85	0.61	0.561079
688	2R_DroMel_CAF1	3,400,463 – 3,400,563	- - - - - - - - -	1211	3,400,463 – 3,400,563	-	4	110	76.46	-1.15	0.81	0.508860
689	2R_DroMel_CAF1	3,402,079 – 3,402,173	- - - - - - - - -	1212	3,402,079 – 3,402,173	-	4	100	86.29	-2.02	0.81	0.901542
690	2R_DroMel_CAF1	3,403,338 – 3,403,435	- - - - - - - - -	1213	3,403,338 – 3,403,435	+	5	97	85.36	-1.97	0.76	0.844790
690	2R_DroMel_CAF1	3,403,338 – 3,403,435	- - - - - - - - -	1214	3,403,338 – 3,403,435	-	5	97	85.36	-1.83	0.74	0.733880
691	2R_DroMel_CAF1	3,405,808 – 3,405,942	- - - - - - - - -	1215	3,405,808 – 3,405,917	+	6	111	77.78	-2.00	0.57	0.867028
				1216	3,405,808 – 3,405,917	-	6	111	77.78	-3.13	0.58	0.991442
				1217	3,405,848 – 3,405,942	+	6	105	81.35	-1.37	0.79	0.648694
				1218	3,405,848 – 3,405,942	-	6	105	81.35	-2.29	0.68	0.857733
692	2R_DroMel_CAF1	3,406,991 – 3,407,084	- - - - - - - - -	1219	3,406,991 – 3,407,084	+	4	93	80.59	-1.45	0.85	0.641032
692	2R_DroMel_CAF1	3,406,991 – 3,407,084	- - - - - - - - -	1220	3,406,991 – 3,407,084	-	4	93	80.59	-2.58	0.83	0.994620
693	2R_DroMel_CAF1	3,407,768 – 3,407,858	- - - - - - - - -	1221	3,407,768 – 3,407,858	+	6	100	79.43	-1.96	0.60	0.811659
694	2R_DroMel_CAF1	3,412,266 – 3,412,412	- - "RNAmicro=f:3412304_t:3412411_strand:+_p:0.715243" - - - - - -	1222	3,412,266 – 3,412,372	+	5	106	81.87	-3.09	0.61	0.988643
				1223	3,412,266 – 3,412,372	-	5	106	81.87	-2.44	0.77	0.978332
				1224	3,412,304 – 3,412,412	-	5	108	80.06	-2.15	0.77	0.960803
695	2R_DroMel_CAF1	3,413,827 – 3,413,955	- - - - - - - - -	1225	3,413,827 – 3,413,921	-	6	110	78.96	-1.17	0.68	0.561554
695	2R_DroMel_CAF1	3,413,827 – 3,413,955	- - - - - - - - -	1226	3,413,865 – 3,413,955	-	5	108	81.15	-2.85	0.45	0.947144
696	2R_DroMel_CAF1	3,416,652 – 3,416,768	- - - - - - - - -	1227	3,416,652 – 3,416,768	+	6	120	77.47	-2.13	0.50	0.803707
697	2R_DroMel_CAF1	3,416,855 – 3,416,961	- - - - - - - - -	1228	3,416,855 – 3,416,961	+	4	109	75.21	-3.61	0.35	0.916681
698	2R_DroMel_CAF1	3,423,450 – 3,423,549	- - - - - - - - -	1229	3,423,450 – 3,423,549	+	3	99	89.90	-2.55	0.84	0.877137
699	2R_DroMel_CAF1	3,423,797 – 3,423,898	- - - - - - - - -	1230	3,423,797 – 3,423,898	-	3	101	85.15	-2.10	0.76	0.739786
700	2R_DroMel_CAF1	3,434,273 – 3,434,383	- - - "knownCDS=Parent=FBtr0088887;Name=Or43b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17853-RA" - - - - -	1231	3,434,273 – 3,434,383	-	6	112	77.05	-1.72	0.67	0.910004
701	2R_DroMel_CAF1	3,444,754 – 3,444,846	- - - "knownCDS=Parent=FBtr0088850;Name=drosha-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8730-RA" - - - - -	1232	3,444,754 – 3,444,846	-	6	98	77.66	-1.34	0.67	0.712536
702	2R_DroMel_CAF1	3,452,899 – 3,453,001	- - - "knownCDS=Parent=FBtr0088851;Name=CG30379-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30379-RA" - - - - -	1233	3,452,899 – 3,453,001	+	5	102	91.47	-1.48	0.82	0.721652
703	2R_DroMel_CAF1	3,453,461 – 3,453,571	- - - "knownCDS=Parent=FBtr0088851;Name=CG30379-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30379-RA" - - - - -	1234	3,453,461 – 3,453,571	+	6	112	80.66	-1.38	0.66	0.544498
704	2R_DroMel_CAF1	3,455,338 – 3,455,439	- - - "knownCDS=Parent=FBtr0088852;Name=CG14766-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14766-RA" - - - - -	1235	3,455,338 – 3,455,439	+	6	104	78.69	-2.07	0.65	0.924469
705	2R_DroMel_CAF1	3,458,897 – 3,459,076	- - "RNAmicro=f:3458897_t:3459014_strand:+_p:0.979520" - - - - - -	1236	3,458,897 – 3,459,007	+	5	118	86.09	-3.58	0.76	0.997098
				1237	3,458,897 – 3,459,007	-	5	118	86.09	-3.75	0.69	0.990555
				1238	3,458,937 – 3,459,047	+	5	118	87.49	-4.33	0.81	0.999413
				1239	3,458,937 – 3,459,047	-	5	118	87.49	-3.86	0.82	0.999453
				1240	3,458,969 – 3,459,076	+	5	115	78.35	-1.62	0.62	0.547746
706	2R_DroMel_CAF1	3,460,073 – 3,460,167	- - - "knownCDS=Parent=FBtr0088880;Name=CG14764-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14764-RA" - - - - -	1241	3,460,073 – 3,460,167	-	6	98	80.35	-1.23	0.71	0.579046
707	2R_DroMel_CAF1	3,478,040 – 3,478,142	- - - - - - - - -	1242	3,478,040 – 3,478,142	+	6	108	82.71	-2.08	0.72	0.747919
708	2R_DroMel_CAF1	3,490,274 – 3,490,394	- - - "knownCDS=Parent=FBtr0088871;Name=CG11198-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11198-RA" - - - - -	1243	3,490,274 – 3,490,394	-	6	120	79.39	-0.95	0.75	0.500000
709	2R_DroMel_CAF1	3,500,000 – 3,500,096	- - - - - - - - -	1244	3,500,000 – 3,500,096	-	5	107	73.41	-2.45	0.30	0.993604
710	2R_DroMel_CAF1	3,500,699 – 3,500,804	- - - - - - - - -	1245	3,500,699 – 3,500,804	-	5	120	74.52	-1.75	0.34	0.599929
711	2R_DroMel_CAF1	3,501,231 – 3,501,322	- - - - - - - - -	1246	3,501,231 – 3,501,322	-	6	102	80.01	-1.09	0.75	0.565677
712	2R_DroMel_CAF1	3,502,406 – 3,502,519	- - - - - - - - -	1247	3,502,406 – 3,502,519	-	4	114	73.98	-2.33	0.74	0.998423
713	2R_DroMel_CAF1	3,502,967 – 3,503,061	- - - "knownCDS=Parent=FBtr0088860, FBtr0088861, FBtr0088862;Name=Nup44A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8722-RB, FlyBase+Annotation+IDs:CG8722-RC, FlyBase+Annotation+IDs:CG8722-RA" - - - - -	1248	3,502,967 – 3,503,061	+	6	116	78.92	-1.47	0.80	0.853502
713	2R_DroMel_CAF1	3,502,967 – 3,503,061		1249	3,502,967 – 3,503,061	-	6	116	78.92	-1.87	0.65	0.876352
714	2R_DroMel_CAF1	3,516,321 – 3,516,420	- - - - - - - - -	1250	3,516,321 – 3,516,420	+	6	120	79.31	-2.02	0.53	0.657560
715	2R_DroMel_CAF1	3,523,049 – 3,523,160	- - - - - - - - -	1251	3,523,049 – 3,523,160	-	6	119	74.61	-1.03	0.68	0.597718
716	2R_DroMel_CAF1	3,524,359 – 3,524,473	- - - "knownCDS=Parent=FBtr0088867;Name=CG14762-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14762-RA" - - - - -	1252	3,524,359 – 3,524,473	+	6	117	77.47	-1.91	0.68	0.939953
716	2R_DroMel_CAF1	3,524,359 – 3,524,473		1253	3,524,359 – 3,524,473	-	6	117	77.47	-1.66	0.58	0.684182
717	2R_DroMel_CAF1	3,530,227 – 3,530,437	- - - - - - - - -	1254	3,530,227 – 3,530,341	+	4	114	96.35	-1.76	1.01	0.870365
				1255	3,530,263 – 3,530,372	+	6	120	75.46	-1.92	0.66	0.964758
				1256	3,530,263 – 3,530,372	-	6	120	75.46	-2.26	0.62	0.982118
				1257	3,530,301 – 3,530,404	+	6	120	69.82	-2.43	0.69	0.993959
				1258	3,530,301 – 3,530,404	-	6	120	69.82	-2.09	0.51	0.975366
				1259	3,530,341 – 3,530,437	+	3	101	75.25	-2.00	0.52	0.500000
718	2R_DroMel_CAF1	3,530,722 – 3,530,849	- - - - - - - - -	1260	3,530,722 – 3,530,826	+	5	106	79.85	-1.70	0.70	0.735154
				1261	3,530,722 – 3,530,826	-	5	106	79.85	-2.32	0.73	0.976438
				1262	3,530,753 – 3,530,849	+	6	116	67.93	-1.48	0.54	0.775773
719	2R_DroMel_CAF1	3,532,230 – 3,532,392	- - - - - - - - -	1263	3,532,230 – 3,532,321	+	3	91	99.27	-1.97	0.94	0.789107
				1264	3,532,230 – 3,532,321	-	3	91	99.27	-2.38	1.00	0.965920
				1265	3,532,247 – 3,532,353	-	4	112	86.09	-3.11	0.68	0.962389
				1266	3,532,281 – 3,532,392	+	4	112	95.52	-1.70	0.90	0.732512
				1267	3,532,281 – 3,532,392	-	4	112	95.52	-1.76	0.87	0.687400
720	2R_DroMel_CAF1	3,533,672 – 3,533,815	- - - - - - - - -	1268	3,533,672 – 3,533,781	+	4	109	88.17	-2.14	0.75	0.863220
				1269	3,533,672 – 3,533,781	-	4	109	88.17	-2.47	0.74	0.917705
				1270	3,533,712 – 3,533,815	+	4	103	92.07	-2.19	0.82	0.890187
				1271	3,533,712 – 3,533,815	-	4	103	92.07	-1.81	0.82	0.754901
721	2R_DroMel_CAF1	3,537,244 – 3,537,357	- - - - - - - - -	1272	3,537,244 – 3,537,357	+	4	113	89.07	-1.91	0.67	0.537183
721	2R_DroMel_CAF1	3,537,244 – 3,537,357	- - - - - - - - -	1273	3,537,244 – 3,537,357	-	4	113	89.07	-2.21	0.81	0.930307
722	2R_DroMel_CAF1	3,541,803 – 3,541,901	- - - - - - - - -	1274	3,541,803 – 3,541,901	+	5	113	72.86	-3.33	0.37	0.999867
722	2R_DroMel_CAF1	3,541,803 – 3,541,901	- - - - - - - - -	1275	3,541,803 – 3,541,901	-	5	113	72.86	-1.93	0.29	0.874686
723	2R_DroMel_CAF1	3,542,425 – 3,542,516	- - - - - - - - -	1276	3,542,425 – 3,542,516	+	5	103	75.57	-2.76	0.56	0.998330
724	2R_DroMel_CAF1	3,548,144 – 3,548,240	- - - - - - - - -	1277	3,548,144 – 3,548,240	-	5	98	74.42	-1.67	0.56	0.608672
725	2R_DroMel_CAF1	3,549,045 – 3,549,136	- - - - - - - - -	1278	3,549,045 – 3,549,136	+	6	93	91.54	-1.82	0.88	0.908058
726	2R_DroMel_CAF1	3,549,700 – 3,549,791	- - - - - - - - -	1279	3,549,700 – 3,549,791	+	6	109	83.17	-1.44	0.75	0.510238
727	2R_DroMel_CAF1	3,560,651 – 3,560,743	- - - - - - - - -	1280	3,560,651 – 3,560,743	+	5	100	77.41	-2.23	0.25	0.937410
728	2R_DroMel_CAF1	3,562,253 – 3,562,359	- - - - - - - - -	1281	3,562,253 – 3,562,359	+	6	107	83.05	-2.08	0.63	0.554971
729	2R_DroMel_CAF1	3,568,984 – 3,569,077	- - - "knownCDS=Parent=FBtr0088828;Name=CG12769-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12769-RA" - - - - -	1282	3,568,984 – 3,569,077	+	6	101	78.67	-2.14	0.52	0.777162
730	2R_DroMel_CAF1	3,574,330 – 3,574,427	- - - - - - - - -	1283	3,574,330 – 3,574,427	+	3	107	83.82	-2.20	0.90	0.967823
731	2R_DroMel_CAF1	3,579,944 – 3,580,054	- - - - - - - - -	1284	3,579,944 – 3,580,054	-	6	120	77.53	-1.52	0.60	0.624599
732	2R_DroMel_CAF1	3,589,024 – 3,589,151	- - - "knownCDS=Parent=FBtr0088774;Name=lig-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8715-RA" - - - - -	1285	3,589,024 – 3,589,127	-	6	119	88.18	-2.40	0.87	0.955071
732	2R_DroMel_CAF1	3,589,024 – 3,589,151		1286	3,589,055 – 3,589,151	-	6	117	79.00	-2.08	0.87	0.951706
733	2R_DroMel_CAF1	3,589,872 – 3,589,975	- - - - - - - - -	1287	3,589,872 – 3,589,975	+	6	110	75.91	-2.24	0.64	0.980898
734	2R_DroMel_CAF1	3,594,714 – 3,594,825	- - - - - - - - -	1288	3,594,714 – 3,594,825	+	5	112	92.30	-1.46	0.85	0.806865
735	2R_DroMel_CAF1	3,595,485 – 3,595,585	- - - - - - - - -	1289	3,595,485 – 3,595,585	-	5	100	91.80	-1.40	0.81	0.582177
736	2R_DroMel_CAF1	3,601,313 – 3,601,420	- - - - - - - - -	1290	3,601,313 – 3,601,420	+	6	110	79.51	-1.20	0.68	0.534394
737	2R_DroMel_CAF1	3,607,695 – 3,607,793	- - - - - - - - -	1291	3,607,695 – 3,607,793	-	6	102	83.49	-1.78	0.72	0.574926
738	2R_DroMel_CAF1	3,609,224 – 3,609,371	- - - "knownCDS=Parent=FBtr0088823;Name=CG8712-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8712-RB" - - - - -	1292	3,609,224 – 3,609,338	+	6	114	85.91	-1.81	0.79	0.537923
738	2R_DroMel_CAF1	3,609,224 – 3,609,371		1293	3,609,263 – 3,609,371	+	6	108	84.88	-1.96	0.79	0.647033
739	2R_DroMel_CAF1	3,616,897 – 3,616,995	- - - - - - - - -	1294	3,616,897 – 3,616,995	+	6	110	81.05	-1.30	0.72	0.583079
740	2R_DroMel_CAF1	3,618,358 – 3,618,512	- - - "knownCDS=Parent=FBtr0088782;Name=CG18316-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18316-RA" - - - - -	1295	3,618,358 – 3,618,472	-	6	120	82.70	-1.30	0.84	0.524824
				1296	3,618,398 – 3,618,512	+	6	120	83.91	-1.93	0.82	0.777599
				1297	3,618,398 – 3,618,512	-	6	120	83.91	-2.33	0.76	0.780039
741	2R_DroMel_CAF1	3,634,047 – 3,634,151	- - - "knownCDS=Parent=FBtr0100140;Name=CG30372-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30372-RB" - - - - -	1298	3,634,047 – 3,634,151	+	6	111	76.42	-1.36	0.62	0.626212
742	2R_DroMel_CAF1	3,635,439 – 3,635,540	- - - "knownCDS=Parent=FBtr0088783;Name=CG2158-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2158-RA" - - - - -	1299	3,635,439 – 3,635,540	-	6	107	80.91	-1.33	0.67	0.521261
743	2R_DroMel_CAF1	3,635,861 – 3,635,961	- - - "knownCDS=Parent=FBtr0088783;Name=CG2158-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2158-RA" - - - - -	1300	3,635,861 – 3,635,961	+	6	103	82.97	-2.82	0.59	0.713725
744	2R_DroMel_CAF1	3,643,835 – 3,643,954	- - - "knownCDS=Parent=FBtr0088785, FBtr0088786;Name=Pabp2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2163-RA, FlyBase+Annotation+IDs:CG2163-RB" - - - - -	1301	3,643,835 – 3,643,926	+	6	114	75.31	-1.64	0.60	0.841091
744	2R_DroMel_CAF1	3,643,835 – 3,643,954		1302	3,643,846 – 3,643,954	+	6	111	81.59	-1.38	0.73	0.602120
745	2R_DroMel_CAF1	3,644,540 – 3,644,654	- - - - - - - - -	1303	3,644,540 – 3,644,654	-	5	118	86.70	-1.47	0.81	0.550044
746	2R_DroMel_CAF1	3,648,418 – 3,648,510	- - - - - - - - -	1304	3,648,418 – 3,648,510	-	6	99	81.12	-2.33	0.55	0.704309
747	2R_DroMel_CAF1	3,650,909 – 3,651,017	- - - "knownCDS=Parent=FBtr0088815;Name=CG8709-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8709-RA" - - - - -	1305	3,650,909 – 3,651,017	-	6	108	81.28	-1.21	0.70	0.500000
748	2R_DroMel_CAF1	3,654,279 – 3,654,384	- - - - - - - - -	1306	3,654,279 – 3,654,384	+	5	120	70.58	-0.78	0.71	0.500000
749	2R_DroMel_CAF1	3,654,757 – 3,654,850	- - - - - - - - -	1307	3,654,757 – 3,654,850	+	6	97	76.57	-1.57	0.56	0.560071
750	2R_DroMel_CAF1	3,659,135 – 3,659,255	- - - "knownCDS=Parent=FBtr0088811, FBtr0088812, FBtr0088813, FBtr0088814;Name=l(2)02045-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11546-RA, FlyBase+Annotation+IDs:CG11546-RB, FlyBase+Annotation+IDs:CG11546-RD, FlyBase+Annotation+IDs:CG11546-RC" - - - - -	1308	3,659,135 – 3,659,255	-	6	120	83.00	-2.86	0.64	0.788336
751	2R_DroMel_CAF1	3,662,514 – 3,662,617	- - - - - - - - -	1309	3,662,514 – 3,662,617	-	6	120	82.43	-2.33	0.60	0.657615
752	2R_DroMel_CAF1	3,664,093 – 3,664,183	- - - - - - - - -	1310	3,664,093 – 3,664,183	+	5	114	74.81	-1.81	0.53	0.750465
753	2R_DroMel_CAF1	3,665,734 – 3,665,878	- - - - - - - - -	1311	3,665,734 – 3,665,842	+	4	120	80.70	-2.00	0.62	0.764140
753	2R_DroMel_CAF1	3,665,734 – 3,665,878	- - - - - - - - -	1312	3,665,771 – 3,665,878	+	4	120	85.46	-3.05	0.74	0.985951
754	2R_DroMel_CAF1	3,674,250 – 3,674,363	- - - - - - - - -	1313	3,674,250 – 3,674,363	+	6	113	79.29	-1.60	0.68	0.799401
755	2R_DroMel_CAF1	3,675,280 – 3,675,379	- - - - - - - - -	1314	3,675,280 – 3,675,379	-	4	99	92.09	-1.69	0.84	0.739928
756	2R_DroMel_CAF1	3,675,868 – 3,675,988	- - - "knownCDS=Parent=FBtr0088806;Name=CG30373-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30373-RA" - - - - -	1315	3,675,868 – 3,675,988	-	5	120	88.08	-1.64	0.84	0.812590
757	2R_DroMel_CAF1	3,676,695 – 3,676,888	- - - "knownCDS=Parent=FBtr0088788;Name=Rs1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2173-RA" - - - - -	1316	3,676,695 – 3,676,811	-	5	120	83.49	-1.87	0.76	0.801068
				1317	3,676,731 – 3,676,851	-	5	120	85.99	-2.15	0.77	0.914080
				1318	3,676,771 – 3,676,888	-	5	118	87.21	-1.94	0.77	0.845926
758	2R_DroMel_CAF1	3,677,314 – 3,677,434	- - - "knownCDS=Parent=FBtr0088788;Name=Rs1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2173-RA" - - - - -	1319	3,677,314 – 3,677,434	+	5	120	90.33	-1.88	0.83	0.951330
759	2R_DroMel_CAF1	3,677,514 – 3,677,634	- - - "knownCDS=Parent=FBtr0088788;Name=Rs1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2173-RA" - - - - -	1320	3,677,514 – 3,677,634	+	5	120	89.50	-1.45	0.86	0.745343
760	2R_DroMel_CAF1	3,677,769 – 3,677,873	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002400; Name=MeU6-Cm68;Dbxref=GB:AJ784382" - - - - - - - -	1321	3,677,769 – 3,677,873	-	5	120	79.00	-2.20	0.64	0.945412
761	2R_DroMel_CAF1	3,678,387 – 3,678,507	- - - "knownCDS=Parent=FBtr0088788;Name=Rs1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2173-RA" - - - - -	1322	3,678,387 – 3,678,507	+	5	120	90.08	-1.86	0.88	0.977988
762	2R_DroMel_CAF1	3,686,108 – 3,686,231	- - - - - - - - -	1323	3,686,108 – 3,686,199	+	5	91	94.84	-1.63	0.81	0.718951
762	2R_DroMel_CAF1	3,686,108 – 3,686,231	- - - - - - - - -	1324	3,686,120 – 3,686,231	+	5	111	94.32	-1.65	0.78	0.589374
763	2R_DroMel_CAF1	3,690,817 – 3,690,975	- - - - - - - - -	1325	3,690,817 – 3,690,936	-	4	120	90.79	-1.54	0.79	0.581106
763	2R_DroMel_CAF1	3,690,817 – 3,690,975	- - - - - - - - -	1326	3,690,857 – 3,690,975	+	4	119	91.98	-1.53	0.79	0.509882
764	2R_DroMel_CAF1	3,700,890 – 3,701,077	- - - - - - - - -	1327	3,700,890 – 3,701,006	+	6	120	68.13	-1.86	0.37	0.743242
				1328	3,700,890 – 3,701,006	-	6	120	68.13	-2.07	0.24	0.547017
				1329	3,700,967 – 3,701,077	-	3	119	75.57	-1.66	0.62	0.734944
765	2R_DroMel_CAF1	3,702,897 – 3,703,044	- - - - - - - - -	1330	3,702,897 – 3,703,009	+	4	112	97.47	-2.73	0.93	0.949405
				1331	3,702,897 – 3,703,009	-	4	112	97.47	-2.27	0.95	0.925411
				1332	3,702,937 – 3,703,044	+	4	112	91.48	-2.56	0.75	0.835338
				1333	3,702,937 – 3,703,044	-	4	112	91.48	-1.82	0.92	0.922489
766	2R_DroMel_CAF1	3,706,219 – 3,706,343	- - - - - - - - -	1334	3,706,219 – 3,706,312	+	5	99	70.67	-2.06	0.39	0.938480
				1335	3,706,219 – 3,706,312	-	5	99	70.67	-2.88	0.35	0.999251
				1336	3,706,235 – 3,706,343	+	4	110	85.29	-1.97	0.63	0.642713
				1337	3,706,235 – 3,706,343	-	4	110	85.29	-2.42	0.65	0.861709
767	2R_DroMel_CAF1	3,712,954 – 3,713,092	- - - - - - - - -	1338	3,712,954 – 3,713,058	+	3	110	77.99	-1.49	0.72	0.705614
767	2R_DroMel_CAF1	3,712,954 – 3,713,092	- - - - - - - - -	1339	3,712,986 – 3,713,092	+	3	112	77.14	-1.00	0.83	0.632142
768	2R_DroMel_CAF1	3,717,369 – 3,717,459	- - - "knownCDS=Parent=FBtr0088804;Name=CG14756-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14756-RA" - - - - -	1340	3,717,369 – 3,717,459	+	6	90	77.26	-1.74	0.62	0.859990
768	2R_DroMel_CAF1	3,717,369 – 3,717,459		1341	3,717,369 – 3,717,459	-	6	90	77.26	-1.70	0.55	0.636095
769	2R_DroMel_CAF1	3,717,886 – 3,717,990	- - - - - - - - -	1342	3,717,886 – 3,717,990	-	5	104	86.64	-1.35	0.91	0.534833
770	2R_DroMel_CAF1	3,725,781 – 3,725,981	- - - "knownCDS=Parent=FBtr0088791;Name=CG33087-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33087-RC" - - - - -	1343	3,725,781 – 3,725,901	+	6	120	81.28	-1.92	0.58	0.581101
				1344	3,725,821 – 3,725,941	+	6	120	79.17	-2.02	0.61	0.858746
				1345	3,725,861 – 3,725,981	+	6	120	78.33	-1.79	0.55	0.621102
771	2R_DroMel_CAF1	3,727,857 – 3,727,964	- - - "knownCDS=Parent=FBtr0088791;Name=CG33087-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33087-RC" - - - - -	1346	3,727,857 – 3,727,964	+	6	116	75.65	-1.55	0.63	0.828784
772	2R_DroMel_CAF1	3,730,556 – 3,730,671	- - - - - - - - -	1347	3,730,556 – 3,730,671	+	5	120	88.68	-1.31	0.84	0.500000
772	2R_DroMel_CAF1	3,730,556 – 3,730,671	- - - - - - - - -	1348	3,730,556 – 3,730,671	-	5	120	88.68	-2.19	0.73	0.842147
773	2R_DroMel_CAF1	3,736,258 – 3,736,378	- - - "knownCDS=Parent=FBtr0088791;Name=CG33087-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33087-RC" - - - - -	1349	3,736,258 – 3,736,378	+	6	120	78.50	-2.25	0.61	0.938289
774	2R_DroMel_CAF1	3,737,387 – 3,737,501	- - - - - - - - -	1350	3,737,387 – 3,737,501	+	3	120	89.55	-2.45	0.79	0.766066
774	2R_DroMel_CAF1	3,737,387 – 3,737,501	- - - - - - - - -	1351	3,737,387 – 3,737,501	-	3	120	89.55	-2.35	0.78	0.693470
775	2R_DroMel_CAF1	3,738,376 – 3,738,572	- - - - - - - - -	1352	3,738,376 – 3,738,492	+	3	120	94.65	-3.30	0.89	0.965657
				1353	3,738,376 – 3,738,492	-	3	120	94.65	-2.39	0.95	0.953382
				1354	3,738,416 – 3,738,532	+	3	120	95.21	-1.74	0.90	0.560643
				1355	3,738,452 – 3,738,572	+	3	120	98.61	-2.00	0.98	0.888408
				1356	3,738,452 – 3,738,572	-	3	120	98.61	-3.71	0.98	0.990590
776	2R_DroMel_CAF1	3,738,612 – 3,738,772	- - - - - - - - -	1357	3,738,612 – 3,738,732	+	3	120	95.56	-2.42	0.96	0.961482
				1358	3,738,612 – 3,738,732	-	3	120	95.56	-2.22	0.86	0.708905
				1359	3,738,652 – 3,738,772	+	3	120	94.44	-2.17	0.99	0.958464
777	2R_DroMel_CAF1	3,740,198 – 3,740,358	- - - - - - - - -	1360	3,740,198 – 3,740,318	-	3	120	96.67	-1.59	0.94	0.556452
777	2R_DroMel_CAF1	3,740,198 – 3,740,358	- - - - - - - - -	1361	3,740,238 – 3,740,358	+	3	120	94.44	-2.58	0.80	0.692010
778	2R_DroMel_CAF1	3,741,191 – 3,741,425	- - - "knownCDS=Parent=FBtr0088803;Name=dpn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8704-RA" - - - - -	1362	3,741,191 – 3,741,305	-	3	120	91.53	-2.27	0.80	0.645964
778	2R_DroMel_CAF1	3,741,191 – 3,741,425		1363	3,741,305 – 3,741,425	+	3	120	98.33	-1.51	0.94	0.500000
779	2R_DroMel_CAF1	3,742,810 – 3,743,050	- - - - - - - - -	1364	3,742,810 – 3,742,930	+	3	120	97.22	-2.02	1.01	0.938590
779	2R_DroMel_CAF1	3,742,810 – 3,743,050	- - - - - - - - -	1365	3,742,930 – 3,743,050	+	3	120	99.44	-2.07	0.97	0.882218
780	2R_DroMel_CAF1	3,743,090 – 3,743,209	- - - - - - - - -	1366	3,743,090 – 3,743,209	-	3	120	94.99	-1.68	0.96	0.707378
781	2R_DroMel_CAF1	3,743,709 – 3,743,869	- - - "knownCDS=Parent=FBtr0088803;Name=dpn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8704-RA" - - - - -	1367	3,743,709 – 3,743,829	-	3	120	88.61	-2.31	0.91	0.941495
781	2R_DroMel_CAF1	3,743,709 – 3,743,869		1368	3,743,749 – 3,743,869	-	3	120	97.22	-1.88	0.99	0.866312
782	2R_DroMel_CAF1	3,746,115 – 3,746,425	- - - - - - - - -	1369	3,746,115 – 3,746,235	+	3	120	90.25	-1.58	0.89	0.543309
				1370	3,746,235 – 3,746,329	-	3	120	81.95	-2.70	0.77	0.980357
				1371	3,746,249 – 3,746,355	-	3	120	90.17	-2.32	0.88	0.890972
				1372	3,746,329 – 3,746,425	-	3	120	83.93	-2.07	0.69	0.698328
783	2R_DroMel_CAF1	3,746,740 – 3,746,976	- - - - - - - - -	1373	3,746,740 – 3,746,860	+	3	120	95.54	-1.64	0.93	0.578556
783	2R_DroMel_CAF1	3,746,740 – 3,746,976	- - - - - - - - -	1374	3,746,860 – 3,746,976	+	3	120	86.55	-2.44	0.75	0.799631
784	2R_DroMel_CAF1	3,747,419 – 3,747,531	- - - - - - - - -	1375	3,747,419 – 3,747,531	+	3	120	90.34	-3.25	0.66	0.629805
784	2R_DroMel_CAF1	3,747,419 – 3,747,531	- - - - - - - - -	1376	3,747,419 – 3,747,531	-	3	120	90.34	-2.58	0.70	0.556290
785	2R_DroMel_CAF1	3,748,330 – 3,748,490	- - - - - - - - -	1377	3,748,330 – 3,748,450	+	3	120	98.33	-1.96	0.95	0.809494
785	2R_DroMel_CAF1	3,748,330 – 3,748,490	- - - - - - - - -	1378	3,748,370 – 3,748,490	+	3	120	98.33	-3.04	0.96	0.979873
786	2R_DroMel_CAF1	3,748,938 – 3,749,054	- - - - - - - - -	1379	3,748,938 – 3,749,054	+	3	120	83.71	-2.16	0.61	0.500000
786	2R_DroMel_CAF1	3,748,938 – 3,749,054	- - - - - - - - -	1380	3,748,938 – 3,749,054	-	3	120	83.71	-2.17	0.61	0.530753
787	2R_DroMel_CAF1	3,753,149 – 3,753,239	- - - - - - - - -	1381	3,753,149 – 3,753,239	+	6	120	78.89	-1.18	0.67	0.530471
788	2R_DroMel_CAF1	3,755,826 – 3,755,958	- - - - - - - - -	1382	3,755,826 – 3,755,929	+	6	108	72.91	-2.30	0.52	0.984003
				1383	3,755,859 – 3,755,958	+	6	115	73.15	-2.49	0.49	0.990190
				1384	3,755,859 – 3,755,958	-	6	115	73.15	-2.05	0.47	0.910350
789	2R_DroMel_CAF1	3,762,768 – 3,762,862	- - - - - - - - -	1385	3,762,768 – 3,762,862	-	6	100	90.63	-2.65	0.85	0.972590
790	2R_DroMel_CAF1	3,763,460 – 3,763,567	- - - - - - - - -	1386	3,763,460 – 3,763,567	-	5	107	73.27	-1.76	0.50	0.684821
791	2R_DroMel_CAF1	3,768,942 – 3,769,104	- - - - - - - - -	1387	3,768,942 – 3,769,040	-	5	98	89.65	-1.57	0.85	0.842910
791	2R_DroMel_CAF1	3,768,942 – 3,769,104	- - - - - - - - -	1388	3,769,012 – 3,769,104	-	6	97	78.73	-1.95	0.58	0.812376
792	2R_DroMel_CAF1	3,770,187 – 3,770,278	- - - - - - - - -	1389	3,770,187 – 3,770,278	+	6	104	74.39	-2.23	0.34	0.698406
793	2R_DroMel_CAF1	3,773,500 – 3,773,608	- - - - - - - - -	1390	3,773,500 – 3,773,608	-	6	118	76.05	-1.45	0.59	0.608013
794	2R_DroMel_CAF1	3,775,973 – 3,776,070	- - - "knownCDS=Parent=FBtr0088800;Name=CG30376-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30376-RA" - - - - -	1391	3,775,973 – 3,776,070	-	5	106	82.67	-1.86	0.60	0.545169
795	2R_DroMel_CAF1	3,778,331 – 3,778,435	- - - "knownCDS=Parent=FBtr0088799;Name=CG30375-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30375-RA" - - - - -	1392	3,778,331 – 3,778,435	+	6	116	75.29	-1.28	0.67	0.767551
795	2R_DroMel_CAF1	3,778,331 – 3,778,435		1393	3,778,331 – 3,778,435	-	6	116	75.29	-1.00	0.72	0.704355
796	2R_DroMel_CAF1	3,791,397 – 3,791,554	- - - - - - - - -	1394	3,791,397 – 3,791,487	-	5	119	78.05	-2.10	0.55	0.881587
				1395	3,791,429 – 3,791,522	-	4	109	86.21	-1.51	0.71	0.567540
				1396	3,791,462 – 3,791,554	-	5	109	85.40	-2.23	0.80	0.954705
797	2R_DroMel_CAF1	3,797,332 – 3,797,469	- - - - - - - - -	1397	3,797,332 – 3,797,432	+	5	106	72.47	-2.14	0.38	0.960628
				1398	3,797,332 – 3,797,432	-	5	106	72.47	-3.15	0.43	0.999813
				1399	3,797,363 – 3,797,469	-	4	112	81.60	-3.10	0.52	0.923581
798	2R_DroMel_CAF1	3,798,042 – 3,798,137	- - - - - - - - -	1400	3,798,042 – 3,798,137	-	6	97	81.67	-1.72	0.72	0.727933
799	2R_DroMel_CAF1	3,798,958 – 3,799,064	- - - - - - - - -	1401	3,798,958 – 3,799,064	+	6	110	78.11	-1.69	0.69	0.892317
800	2R_DroMel_CAF1	3,801,632 – 3,801,761	- - - - - - - - -	1402	3,801,632 – 3,801,727	+	6	95	95.93	-1.86	0.89	0.958136
				1403	3,801,632 – 3,801,727	-	6	95	95.93	-2.75	0.94	0.999866
				1404	3,801,655 – 3,801,761	-	6	110	82.05	-1.97	0.59	0.534988
801	2R_DroMel_CAF1	3,802,617 – 3,802,717	- - - - - - - - -	1405	3,802,617 – 3,802,717	+	6	120	78.93	-2.03	0.63	0.892574
802	2R_DroMel_CAF1	3,808,820 – 3,808,925	- - - - - - - - -	1406	3,808,820 – 3,808,925	+	3	105	75.59	-2.41	0.61	0.992484
802	2R_DroMel_CAF1	3,808,820 – 3,808,925	- - - - - - - - -	1407	3,808,820 – 3,808,925	-	3	105	75.59	-2.20	0.64	0.988126
803	2R_DroMel_CAF1	3,812,246 – 3,812,343	- - - - - - - - -	1408	3,812,246 – 3,812,343	-	6	103	83.05	-2.23	0.68	0.685023
804	2R_DroMel_CAF1	3,813,270 – 3,813,364	- - - - - - - - -	1409	3,813,270 – 3,813,364	+	6	114	75.76	-1.64	0.79	0.962785
805	2R_DroMel_CAF1	3,815,096 – 3,815,193	- - - - - - - - -	1410	3,815,096 – 3,815,193	-	5	99	81.86	-2.55	0.64	0.956535
806	2R_DroMel_CAF1	3,815,310 – 3,815,440	- - - - - - - - -	1411	3,815,310 – 3,815,420	+	6	114	82.24	-2.54	0.85	0.946677
806	2R_DroMel_CAF1	3,815,310 – 3,815,440	- - - - - - - - -	1412	3,815,348 – 3,815,440	+	6	98	81.98	-2.76	0.76	0.922290
807	2R_DroMel_CAF1	3,821,776 – 3,821,890	- - - - - - - - -	1413	3,821,776 – 3,821,890	-	6	116	83.64	-2.58	0.68	0.703608
808	2R_DroMel_CAF1	3,822,490 – 3,822,600	- - - - - - - - -	1414	3,822,490 – 3,822,600	-	6	113	95.14	-2.85	0.95	0.999921
809	2R_DroMel_CAF1	3,823,195 – 3,823,289	- - - - - - - - -	1415	3,823,195 – 3,823,289	+	6	100	93.21	-2.02	0.90	0.985619
810	2R_DroMel_CAF1	3,823,460 – 3,823,656	- - - - - - - - -	1416	3,823,460 – 3,823,554	-	6	94	96.10	-2.06	0.90	0.989972
810	2R_DroMel_CAF1	3,823,460 – 3,823,656	- - - - - - - - -	1417	3,823,554 – 3,823,656	+	5	116	77.35	-2.34	0.41	0.950776
811	2R_DroMel_CAF1	3,824,974 – 3,825,108	- - - - - - - - -	1418	3,824,974 – 3,825,077	-	5	105	88.67	-2.97	0.70	0.931360
811	2R_DroMel_CAF1	3,824,974 – 3,825,108	- - - - - - - - -	1419	3,825,011 – 3,825,108	-	5	101	77.72	-3.06	0.59	0.998775
812	2R_DroMel_CAF1	3,828,749 – 3,828,844	- - - - - - - - -	1420	3,828,749 – 3,828,844	+	5	95	89.63	-2.33	0.78	0.963175
813	2R_DroMel_CAF1	3,832,343 – 3,832,460	- - - - - - - - -	1421	3,832,343 – 3,832,460	+	5	117	81.97	-1.90	0.70	0.798149
813	2R_DroMel_CAF1	3,832,343 – 3,832,460	- - - - - - - - -	1422	3,832,343 – 3,832,460	-	5	117	81.97	-2.36	0.67	0.939750
814	2R_DroMel_CAF1	3,845,542 – 3,845,675	- - - - - - - - -	1423	3,845,542 – 3,845,644	+	6	112	77.94	-2.02	0.67	0.942550
				1424	3,845,542 – 3,845,644	-	6	112	77.94	-1.26	0.71	0.735799
				1425	3,845,564 – 3,845,675	+	6	120	77.05	-2.10	0.58	0.934363
				1426	3,845,564 – 3,845,675	-	6	120	77.05	-1.93	0.64	0.935598
815	2R_DroMel_CAF1	3,846,337 – 3,846,436	- - - - - - - - -	1427	3,846,337 – 3,846,436	+	6	102	79.79	-1.39	0.63	0.515668
816	2R_DroMel_CAF1	3,854,687 – 3,854,787	- - - - - - - - -	1428	3,854,687 – 3,854,787	-	6	103	81.45	-1.74	0.63	0.599108
817	2R_DroMel_CAF1	3,856,009 – 3,856,115	- - - - - - - - -	1429	3,856,009 – 3,856,115	-	4	107	85.02	-1.54	0.67	0.528732
818	2R_DroMel_CAF1	3,858,881 – 3,858,973	- - - - - - - - -	1430	3,858,881 – 3,858,973	+	4	103	72.47	-1.80	0.53	0.657954
819	2R_DroMel_CAF1	3,864,917 – 3,865,040	- - - - - - - - -	1431	3,864,917 – 3,865,013	+	4	96	95.31	-2.06	0.93	0.937468
819	2R_DroMel_CAF1	3,864,917 – 3,865,040	- - - - - - - - -	1432	3,864,941 – 3,865,040	+	4	99	94.28	-1.75	0.93	0.864902
820	2R_DroMel_CAF1	3,868,006 – 3,868,102	- - - - - - - - -	1433	3,868,006 – 3,868,102	-	4	102	95.96	-1.69	0.99	0.839347
821	2R_DroMel_CAF1	3,870,389 – 3,870,516	- - - "knownCDS=Parent=FBtr0088739;Name=CG11635-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11635-RA" - - - - -	1434	3,870,389 – 3,870,498	+	4	118	87.63	-1.64	0.87	0.784096
				1435	3,870,424 – 3,870,516	+	4	101	87.22	-1.52	0.94	0.804752
				1436	3,870,424 – 3,870,516	-	4	101	87.22	-1.49	0.88	0.679601
822	2R_DroMel_CAF1	3,870,792 – 3,870,911	- - - "knownCDS=Parent=FBtr0088739;Name=CG11635-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11635-RA" - - - - -	1437	3,870,792 – 3,870,911	-	4	119	92.86	-2.12	0.83	0.876667
823	2R_DroMel_CAF1	3,872,926 – 3,873,036	- - "RNAmicro=f:3872926_t:3873035_strand:-_p:0.986003" - - - - - -	1438	3,872,926 – 3,873,036	+	3	110	68.18	-5.68	0.84	0.999774
823	2R_DroMel_CAF1	3,872,926 – 3,873,036		1439	3,872,926 – 3,873,036	-	3	110	68.18	-5.48	0.74	0.999967
824	2R_DroMel_CAF1	3,875,180 – 3,875,298	- - "RNAmicro=f:3875180_t:3875297_strand:-_p:0.586459" - - - - - -	1440	3,875,180 – 3,875,298	+	4	118	80.43	-1.92	0.72	0.866859
824	2R_DroMel_CAF1	3,875,180 – 3,875,298		1441	3,875,180 – 3,875,298	-	4	118	80.43	-3.43	0.82	0.999583
825	2R_DroMel_CAF1	3,877,056 – 3,877,166	- - - - - - - - -	1442	3,877,056 – 3,877,166	+	4	110	91.67	-1.63	0.81	0.644635
826	2R_DroMel_CAF1	3,877,608 – 3,877,771	- - "RNAmicro=f:3877608_t:3877719_strand:-_p:0.728559" "knownCDS=Parent=FBtr0088769;Name=CG30362-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30362-RA" - - - - -	1443	3,877,608 – 3,877,709	+	6	112	68.53	-1.61	0.47	0.697276
				1444	3,877,608 – 3,877,709	-	6	112	68.53	-3.19	0.61	0.996906
				1445	3,877,644 – 3,877,745	+	4	101	86.96	-1.71	0.80	0.756392
				1446	3,877,680 – 3,877,771	+	4	91	81.68	-2.17	0.71	0.931512
827	2R_DroMel_CAF1	3,882,861 – 3,882,962	- - - - - - - - -	1447	3,882,861 – 3,882,962	-	5	108	83.04	-1.59	0.71	0.551152
828	2R_DroMel_CAF1	3,895,109 – 3,895,201	- - - - - - - - -	1448	3,895,109 – 3,895,201	+	6	92	79.12	-1.22	0.69	0.600102
829	2R_DroMel_CAF1	3,896,705 – 3,896,796	- - - - - - - - -	1449	3,896,705 – 3,896,796	-	6	116	74.46	-1.96	0.45	0.739944
830	2R_DroMel_CAF1	3,899,036 – 3,899,137	- - - - - - - - -	1450	3,899,036 – 3,899,137	-	6	107	80.12	-1.75	0.57	0.553138
831	2R_DroMel_CAF1	3,902,519 – 3,902,613	- - - "knownCDS=Parent=FBtr0088741;Name=CG11641-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11641-RA" - - - - -	1451	3,902,519 – 3,902,613	-	6	97	79.87	-1.83	0.55	0.551680
832	2R_DroMel_CAF1	3,903,960 – 3,904,053	- - - - - - - - -	1452	3,903,960 – 3,904,053	+	6	116	90.13	-2.20	0.81	0.630309
833	2R_DroMel_CAF1	3,908,632 – 3,908,733	- - - - - - - - -	1453	3,908,632 – 3,908,733	+	6	107	78.11	-1.65	0.67	0.857244
834	2R_DroMel_CAF1	3,922,433 – 3,922,547	- - - - - - - - -	1454	3,922,433 – 3,922,547	+	5	120	90.89	-2.28	0.74	0.859938
835	2R_DroMel_CAF1	3,927,176 – 3,927,267	- - - - - - - - -	1455	3,927,176 – 3,927,267	+	6	103	75.79	-2.01	0.41	0.538062
836	2R_DroMel_CAF1	3,931,986 – 3,932,086	- - - - - - - - -	1456	3,931,986 – 3,932,086	+	6	112	73.60	-2.16	0.41	0.871952
837	2R_DroMel_CAF1	3,932,902 – 3,932,997	- - - "knownCDS=Parent=FBtr0088742;Name=CSN7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2038-RA" - - - - -	1457	3,932,902 – 3,932,997	+	6	106	78.45	-2.21	0.72	0.960402
838	2R_DroMel_CAF1	3,937,351 – 3,937,457	- - - - - - - - -	1458	3,937,351 – 3,937,457	-	4	106	86.61	-2.15	0.69	0.823987
839	2R_DroMel_CAF1	3,939,162 – 3,939,393	- - - - - - - - -	1459	3,939,162 – 3,939,282	-	3	120	78.29	-1.49	0.65	0.509893
839	2R_DroMel_CAF1	3,939,162 – 3,939,393	- - - - - - - - -	1460	3,939,282 – 3,939,393	+	3	120	79.26	-1.60	0.69	0.662897
840	2R_DroMel_CAF1	3,940,047 – 3,940,152	- - - "knownCDS=Parent=FBtr0088742;Name=CSN7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2038-RA" - - - - -	1461	3,940,047 – 3,940,152	-	6	105	78.73	-1.67	0.58	0.621938
841	2R_DroMel_CAF1	3,943,349 – 3,943,467	- - - - - - - - -	1462	3,943,349 – 3,943,467	+	5	118	91.69	-1.94	0.77	0.833923
842	2R_DroMel_CAF1	3,954,381 – 3,954,565	- - - "knownCDS=Parent=FBtr0088760;Name=Cyp4ad1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2110-RA" - - - - -	1463	3,954,381 – 3,954,501	-	6	120	78.73	-1.44	0.62	0.599638
842	2R_DroMel_CAF1	3,954,381 – 3,954,565		1464	3,954,461 – 3,954,565	-	6	120	79.51	-1.69	0.58	0.588161
843	2R_DroMel_CAF1	3,956,628 – 3,956,748	- - - "knownCDS=Parent=FBtr0088745;Name=Cyp4e2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2060-RA" - - - - -	1465	3,956,628 – 3,956,748	+	6	120	86.17	-2.14	0.80	0.690043
844	2R_DroMel_CAF1	3,956,798 – 3,956,901	- - "RNAmicro=f:3956798_t:3956904_strand:+_p:0.990671" - - - - - -	1466	3,956,798 – 3,956,901	+	6	107	88.69	-2.47	0.90	0.991195
845	2R_DroMel_CAF1	3,957,305 – 3,957,406	- - - - - - - - -	1467	3,957,305 – 3,957,406	-	6	110	70.94	-1.38	0.60	0.777060
846	2R_DroMel_CAF1	3,959,403 – 3,959,495	- - - "knownCDS=Parent=FBtr0088746;Name=Cyp4e1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2062-RA" - - - - -	1468	3,959,403 – 3,959,495	+	6	102	79.83	-1.97	0.59	0.770304
847	2R_DroMel_CAF1	3,969,210 – 3,969,450	- - - "knownCDS=Parent=FBtr0088758;Name=LvpL-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8695-RA" - - - - -	1469	3,969,210 – 3,969,330	+	6	120	77.72	-2.26	0.42	0.651294
847	2R_DroMel_CAF1	3,969,210 – 3,969,450		1470	3,969,330 – 3,969,450	-	6	120	79.44	-1.67	0.61	0.664756
848	2R_DroMel_CAF1	3,971,764 – 3,971,861	- - - - - - - - -	1471	3,971,764 – 3,971,861	-	6	97	80.30	-1.53	0.71	0.749387
849	2R_DroMel_CAF1	3,972,412 – 3,972,510	- - - "knownCDS=Parent=FBtr0088748;Name=CG8693-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8693-RA" - - - - -	1472	3,972,412 – 3,972,510	-	6	110	79.03	-1.38	0.68	0.698392
850	2R_DroMel_CAF1	3,982,255 – 3,982,351	- - - "knownCDS=Parent=FBtr0088757;Name=CG11669-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11669-RA" - - - - -	1473	3,982,255 – 3,982,351	+	6	96	79.58	-1.85	0.56	0.608841
851	2R_DroMel_CAF1	3,987,422 – 3,987,524	- - - "knownCDS=Parent=FBtr0088755, FBtr0088756;Name=mXr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30361-RB, FlyBase+Annotation+IDs:CG30361-RC" - - - - -	1474	3,987,422 – 3,987,524	-	6	108	79.29	-2.40	0.47	0.748913
852	2R_DroMel_CAF1	3,991,206 – 3,991,310	- - - "knownCDS=Parent=FBtr0088755, FBtr0088756;Name=mXr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30361-RB, FlyBase+Annotation+IDs:CG30361-RC" - - - - -	1475	3,991,206 – 3,991,310	+	6	116	75.59	-0.84	0.73	0.578579
853	2R_DroMel_CAF1	3,991,783 – 3,991,894	- - - "knownCDS=Parent=FBtr0088755, FBtr0088756;Name=mXr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30361-RB, FlyBase+Annotation+IDs:CG30361-RC" - - - - -	1476	3,991,783 – 3,991,894	-	6	120	82.28	-1.81	0.63	0.539094
854	2R_DroMel_CAF1	3,997,866 – 3,997,958	- - - - - - - - -	1477	3,997,866 – 3,997,958	+	3	100	83.62	-2.10	0.78	0.830584
855	2R_DroMel_CAF1	3,999,145 – 3,999,239	- - - - - - - - -	1478	3,999,145 – 3,999,239	+	5	94	90.85	-2.44	0.70	0.661710
855	2R_DroMel_CAF1	3,999,145 – 3,999,239	- - - - - - - - -	1479	3,999,145 – 3,999,239	-	5	94	90.85	-1.57	0.81	0.749690
856	2R_DroMel_CAF1	4,001,266 – 4,001,377	- - - - - - - - -	1480	4,001,266 – 4,001,377	-	5	115	84.92	-2.57	0.62	0.810185
857	2R_DroMel_CAF1	4,014,863 – 4,014,954	- - - - - - - - -	1481	4,014,863 – 4,014,954	+	4	91	82.10	-2.07	0.71	0.899118
858	2R_DroMel_CAF1	4,015,139 – 4,015,240	- - - - - - - - -	1482	4,015,139 – 4,015,240	+	3	103	97.39	-2.96	0.97	0.986512
858	2R_DroMel_CAF1	4,015,139 – 4,015,240	- - - - - - - - -	1483	4,015,139 – 4,015,240	-	3	103	97.39	-1.84	0.98	0.842949
859	2R_DroMel_CAF1	4,016,534 – 4,016,694	- - - - - - - - -	1484	4,016,534 – 4,016,654	+	3	120	94.44	-1.87	0.94	0.777776
				1485	4,016,534 – 4,016,654	-	3	120	94.44	-1.63	0.94	0.627363
				1486	4,016,574 – 4,016,694	+	3	120	91.67	-1.90	0.89	0.702502
860	2R_DroMel_CAF1	4,017,010 – 4,017,266	- - - - - - - - -	1487	4,017,010 – 4,017,109	-	3	120	83.95	-0.72	0.98	0.887681
				1488	4,017,029 – 4,017,149	+	3	120	98.33	-3.68	0.92	0.968939
				1489	4,017,069 – 4,017,186	+	3	117	98.86	-1.76	1.00	0.822634
				1490	4,017,149 – 4,017,266	+	5	117	96.24	-1.40	0.87	0.731066
861	2R_DroMel_CAF1	4,017,306 – 4,017,410	- - - - - - - - -	1491	4,017,306 – 4,017,410	-	4	120	86.53	-2.68	0.79	0.979411
862	2R_DroMel_CAF1	4,017,450 – 4,017,564	- - - - - - - - -	1492	4,017,450 – 4,017,564	-	5	120	95.19	-1.49	0.82	0.621611
863	2R_DroMel_CAF1	4,018,468 – 4,018,628	- - - - - - - - -	1493	4,018,468 – 4,018,588	-	5	120	91.45	-1.99	0.75	0.764440
				1494	4,018,508 – 4,018,628	+	5	120	95.81	-2.70	0.86	0.998600
				1495	4,018,508 – 4,018,628	-	5	120	95.81	-2.46	0.88	0.998441
864	2R_DroMel_CAF1	4,018,834 – 4,018,993	- - - - - - - - -	1496	4,018,834 – 4,018,953	-	5	119	95.29	-1.57	0.90	0.958655
864	2R_DroMel_CAF1	4,018,834 – 4,018,993	- - - - - - - - -	1497	4,018,874 – 4,018,993	-	5	119	95.63	-1.47	0.99	0.982218
865	2R_DroMel_CAF1	4,020,944 – 4,021,063	- - - - - - - - -	1498	4,020,944 – 4,021,063	+	3	119	93.84	-2.50	0.90	0.915071
866	2R_DroMel_CAF1	4,021,103 – 4,021,223	- - - - - - - - -	1499	4,021,103 – 4,021,223	-	3	120	90.29	-2.65	0.95	0.984351
867	2R_DroMel_CAF1	4,021,488 – 4,021,608	- - - - - - - - -	1500	4,021,488 – 4,021,608	+	4	120	93.75	-1.77	0.92	0.870447
868	2R_DroMel_CAF1	4,021,672 – 4,021,831	- - - - - - - - -	1501	4,021,672 – 4,021,791	-	5	120	89.78	-1.60	0.75	0.577465
868	2R_DroMel_CAF1	4,021,672 – 4,021,831	- - - - - - - - -	1502	4,021,711 – 4,021,831	-	5	120	91.50	-2.24	0.78	0.949762
869	2R_DroMel_CAF1	4,023,791 – 4,023,904	- - - - - - - - -	1503	4,023,791 – 4,023,904	-	5	120	84.42	-1.66	0.71	0.578041
870	2R_DroMel_CAF1	4,024,281 – 4,024,385	- - - - - - - - -	1504	4,024,281 – 4,024,385	-	4	120	84.35	-1.81	0.71	0.749663
871	2R_DroMel_CAF1	4,024,756 – 4,024,914	- - - - - - - - -	1505	4,024,756 – 4,024,874	+	5	120	94.64	-1.70	0.89	0.975387
				1506	4,024,756 – 4,024,874	-	5	120	94.64	-2.24	0.89	0.998586
				1507	4,024,796 – 4,024,914	+	5	120	87.86	-1.97	0.71	0.707017
				1508	4,024,796 – 4,024,914	-	5	120	87.86	-1.58	0.75	0.572451
872	2R_DroMel_CAF1	4,025,025 – 4,025,264	- - - - - - - - -	1509	4,025,025 – 4,025,144	-	5	120	92.13	-1.78	0.81	0.876938
872	2R_DroMel_CAF1	4,025,025 – 4,025,264	- - - - - - - - -	1510	4,025,144 – 4,025,264	+	5	120	96.17	-1.22	0.91	0.653823
873	2R_DroMel_CAF1	4,026,072 – 4,026,232	- - - - - - - - -	1511	4,026,072 – 4,026,192	-	5	120	95.17	-1.71	0.82	0.816936
873	2R_DroMel_CAF1	4,026,072 – 4,026,232	- - - - - - - - -	1512	4,026,112 – 4,026,232	+	5	120	95.50	-1.38	0.84	0.567029
874	2R_DroMel_CAF1	4,027,000 – 4,027,145	- - - - - - - - -	1513	4,027,000 – 4,027,116	+	4	120	92.36	-2.04	0.74	0.588655
				1514	4,027,000 – 4,027,116	-	4	120	92.36	-2.02	0.83	0.866863
				1515	4,027,040 – 4,027,145	-	4	120	85.59	-1.97	0.82	0.892378
875	2R_DroMel_CAF1	4,029,197 – 4,029,314	- - - - - - - - -	1516	4,029,197 – 4,029,314	-	4	119	86.16	-2.94	0.65	0.916036
876	2R_DroMel_CAF1	4,030,055 – 4,030,215	- - - - - - - - -	1517	4,030,055 – 4,030,175	+	5	120	94.17	-2.11	0.79	0.894482
				1518	4,030,055 – 4,030,175	-	5	120	94.17	-1.43	0.88	0.864586
				1519	4,030,095 – 4,030,215	+	5	120	96.17	-1.41	0.85	0.631188
877	2R_DroMel_CAF1	4,031,379 – 4,031,819	- - - - - - - - -	1520	4,031,379 – 4,031,499	-	5	120	88.07	-1.37	0.82	0.512259
				1521	4,031,459 – 4,031,579	+	5	120	92.08	-2.14	0.77	0.896211
				1522	4,031,499 – 4,031,619	+	5	120	96.25	-2.00	0.89	0.991631
				1523	4,031,619 – 4,031,739	+	5	120	95.08	-2.04	0.75	0.500000
				1524	4,031,659 – 4,031,779	+	5	120	93.00	-2.09	0.83	0.980011
				1525	4,031,699 – 4,031,819	-	5	120	86.58	-1.87	0.70	0.628000
878	2R_DroMel_CAF1	4,031,899 – 4,032,011	- - - - - - - - -	1526	4,031,899 – 4,032,011	+	4	120	82.56	-1.68	0.71	0.662073
879	2R_DroMel_CAF1	4,033,008 – 4,033,167	- - - "knownCDS=Parent=FBtr0088754;Name=mXr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30361-RA" - - - - -	1527	4,033,008 – 4,033,128	+	5	120	97.83	-2.86	0.97	0.999893
				1528	4,033,008 – 4,033,128	-	5	120	97.83	-2.44	0.98	0.999729
				1529	4,033,048 – 4,033,167	+	5	120	95.06	-1.76	0.94	0.994230
880	2R_DroMel_CAF1	4,033,272 – 4,033,512	- - - "knownCDS=Parent=FBtr0088754;Name=mXr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30361-RA" - - - - -	1530	4,033,272 – 4,033,392	+	5	120	90.00	-1.92	0.78	0.872800
				1531	4,033,272 – 4,033,392	-	5	120	90.00	-1.92	0.74	0.737683
				1532	4,033,312 – 4,033,432	+	5	120	90.17	-1.76	0.80	0.858174
				1533	4,033,392 – 4,033,512	+	5	120	92.67	-1.27	0.89	0.717260
881	2R_DroMel_CAF1	4,034,067 – 4,034,261	- - - - - - - - -	1534	4,034,067 – 4,034,181	+	5	120	90.12	-1.58	0.78	0.668443
				1535	4,034,101 – 4,034,221	+	5	120	90.75	-2.96	0.79	0.993533
				1536	4,034,101 – 4,034,221	-	5	120	90.75	-2.52	0.78	0.975780
				1537	4,034,141 – 4,034,261	+	5	120	92.08	-3.08	0.82	0.998568
				1538	4,034,141 – 4,034,261	-	5	120	92.08	-1.42	0.83	0.712727
882	2R_DroMel_CAF1	4,034,522 – 4,034,642	- - - - - - - - -	1539	4,034,522 – 4,034,642	+	5	120	98.00	-1.29	0.97	0.814136
883	2R_DroMel_CAF1	4,035,952 – 4,036,135	- - - - - - - - -	1540	4,035,952 – 4,036,055	-	5	120	81.42	-1.66	0.69	0.612235
883	2R_DroMel_CAF1	4,035,952 – 4,036,135	- - - - - - - - -	1541	4,036,015 – 4,036,135	-	4	120	88.19	-1.63	0.71	0.594992
884	2R_DroMel_CAF1	4,036,295 – 4,036,455	- - - - - - - - -	1542	4,036,295 – 4,036,415	+	5	120	95.64	-1.76	0.85	0.933868
				1543	4,036,295 – 4,036,415	-	5	120	95.64	-2.06	0.90	0.996622
				1544	4,036,335 – 4,036,455	+	5	120	97.49	-1.20	0.97	0.714400
				1545	4,036,335 – 4,036,455	-	5	120	97.49	-1.43	0.98	0.940562
885	2R_DroMel_CAF1	4,036,735 – 4,036,852	- - - - - - - - -	1546	4,036,735 – 4,036,852	+	3	118	88.10	-2.52	0.76	0.773513
886	2R_DroMel_CAF1	4,037,373 – 4,037,493	- - - - - - - - -	1547	4,037,373 – 4,037,493	+	5	120	87.83	-1.82	0.76	0.754913
887	2R_DroMel_CAF1	4,038,222 – 4,038,337	- - - - - - - - -	1548	4,038,222 – 4,038,337	-	5	120	95.67	-1.90	0.88	0.986120
888	2R_DroMel_CAF1	4,038,423 – 4,038,543	- - - - - - - - -	1549	4,038,423 – 4,038,543	-	5	120	94.67	-1.86	0.88	0.987967
889	2R_DroMel_CAF1	4,039,860 – 4,040,012	- - - - - - - - -	1550	4,039,860 – 4,039,976	-	5	120	94.88	-1.20	0.93	0.752362
889	2R_DroMel_CAF1	4,039,860 – 4,040,012	- - - - - - - - -	1551	4,039,896 – 4,040,012	-	5	120	97.45	-3.12	0.97	0.999951
890	2R_DroMel_CAF1	4,040,603 – 4,040,801	- - - - - - - - -	1552	4,040,603 – 4,040,721	-	5	120	84.18	-1.57	0.76	0.567197
890	2R_DroMel_CAF1	4,040,603 – 4,040,801	- - - - - - - - -	1553	4,040,683 – 4,040,801	+	5	120	93.01	-1.26	0.86	0.625254
891	2R_DroMel_CAF1	4,041,000 – 4,041,236	- - "RNAmicro=f:4041000_t:4041119_strand:+_p:0.694003" - - - - - -	1554	4,041,000 – 4,041,120	-	5	120	83.29	-1.63	0.81	0.665915
				1555	4,041,080 – 4,041,196	-	4	120	87.25	-1.70	0.68	0.607272
				1556	4,041,120 – 4,041,236	+	4	120	90.34	-1.52	0.74	0.500000
892	2R_DroMel_CAF1	4,041,814 – 4,041,960	- - - - - - - - -	1557	4,041,814 – 4,041,934	-	5	120	95.48	-1.30	0.90	0.758311
892	2R_DroMel_CAF1	4,041,814 – 4,041,960	- - - - - - - - -	1558	4,041,854 – 4,041,960	-	5	120	80.16	-1.68	0.74	0.765494
893	2R_DroMel_CAF1	4,042,040 – 4,042,199	- - - - - - - - -	1559	4,042,040 – 4,042,159	+	5	120	94.65	-2.26	0.79	0.936157
893	2R_DroMel_CAF1	4,042,040 – 4,042,199	- - - - - - - - -	1560	4,042,080 – 4,042,199	+	5	120	93.65	-2.96	0.84	0.998714
894	2R_DroMel_CAF1	4,042,359 – 4,042,558	- - - - - - - - -	1561	4,042,359 – 4,042,478	-	5	120	78.73	-2.06	0.56	0.844657
894	2R_DroMel_CAF1	4,042,359 – 4,042,558	- - - - - - - - -	1562	4,042,438 – 4,042,558	-	5	120	83.75	-1.56	0.82	0.613303
895	2R_DroMel_CAF1	4,043,065 – 4,043,223	- - - - - - - - -	1563	4,043,065 – 4,043,183	-	5	120	92.36	-1.83	0.74	0.562347
895	2R_DroMel_CAF1	4,043,065 – 4,043,223	- - - - - - - - -	1564	4,043,104 – 4,043,223	-	5	120	93.48	-1.41	0.88	0.864990
896	2R_DroMel_CAF1	4,043,340 – 4,043,539	- - - - - - - - -	1565	4,043,340 – 4,043,459	-	5	120	94.47	-2.50	0.89	0.999368
				1566	4,043,380 – 4,043,499	-	5	120	93.63	-2.69	0.90	0.999821
				1567	4,043,420 – 4,043,539	+	5	120	96.06	-2.18	0.94	0.999290
897	2R_DroMel_CAF1	4,044,439 – 4,044,559	- - - - - - - - -	1568	4,044,439 – 4,044,559	+	5	120	90.33	-2.33	0.80	0.980566
898	2R_DroMel_CAF1	4,045,492 – 4,045,691	- - - - - - - - -	1569	4,045,492 – 4,045,611	+	5	120	97.14	-2.03	0.93	0.996698
				1570	4,045,492 – 4,045,611	-	5	120	97.14	-1.59	0.91	0.938594
				1571	4,045,532 – 4,045,651	+	5	120	97.32	-2.14	0.93	0.997940
				1572	4,045,532 – 4,045,651	-	5	120	97.32	-1.19	0.92	0.530799
				1573	4,045,572 – 4,045,691	-	5	120	96.98	-1.58	0.94	0.968269
899	2R_DroMel_CAF1	4,046,045 – 4,046,157	- - - "knownCDS=Parent=FBtr0088753;Name=CG14754-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14754-RA" - - - - -	1574	4,046,045 – 4,046,157	+	4	120	91.53	-1.92	0.77	0.701794
900	2R_DroMel_CAF1	4,046,838 – 4,046,939	- - - - - - - - -	1575	4,046,838 – 4,046,939	+	5	120	76.88	-1.93	0.66	0.932591
901	2R_DroMel_CAF1	4,047,018 – 4,047,298	- - - - - - - - -	1576	4,047,018 – 4,047,138	+	5	120	98.83	-2.50	0.96	0.999143
				1577	4,047,138 – 4,047,258	+	5	120	94.92	-1.78	0.88	0.978141
				1578	4,047,138 – 4,047,258	-	5	120	94.92	-1.58	0.89	0.953040
				1579	4,047,178 – 4,047,298	+	5	120	96.50	-2.17	0.91	0.997873
				1580	4,047,178 – 4,047,298	-	5	120	96.50	-2.06	0.98	0.999411
902	2R_DroMel_CAF1	4,047,800 – 4,048,178	- - - - - - - - -	1581	4,047,800 – 4,047,920	-	5	120	89.17	-2.75	0.71	0.911833
				1582	4,047,920 – 4,048,040	+	5	120	93.33	-1.32	0.87	0.731470
				1583	4,047,960 – 4,048,080	+	5	120	92.75	-1.44	0.83	0.716993
				1584	4,048,080 – 4,048,178	-	4	117	86.04	-1.57	0.79	0.649928
903	2R_DroMel_CAF1	4,049,088 – 4,049,208	- - - - - - - - -	1585	4,049,088 – 4,049,208	-	5	120	93.54	-1.63	0.88	0.958060
904	2R_DroMel_CAF1	4,049,544 – 4,049,698	- - - - - - - - -	1586	4,049,544 – 4,049,661	+	5	120	88.47	-2.06	0.76	0.884555
904	2R_DroMel_CAF1	4,049,544 – 4,049,698	- - - - - - - - -	1587	4,049,582 – 4,049,698	-	5	120	85.53	-1.57	0.73	0.528007
905	2R_DroMel_CAF1	4,050,328 – 4,050,528	- - - - - - - - -	1588	4,050,328 – 4,050,448	-	5	120	96.21	-2.71	0.85	0.997228
				1589	4,050,408 – 4,050,528	+	5	120	97.83	-1.82	0.94	0.989089
				1590	4,050,408 – 4,050,528	-	5	120	97.83	-1.38	0.97	0.899276
906	2R_DroMel_CAF1	4,050,648 – 4,050,766	- - - - - - - - -	1591	4,050,648 – 4,050,766	+	5	120	90.15	-1.83	0.76	0.774740
906	2R_DroMel_CAF1	4,050,648 – 4,050,766	- - - - - - - - -	1592	4,050,648 – 4,050,766	-	5	120	90.15	-1.61	0.79	0.721302
907	2R_DroMel_CAF1	4,050,938 – 4,051,044	- - - - - - - - -	1593	4,050,938 – 4,051,044	+	5	120	74.71	-3.08	0.55	0.999653
907	2R_DroMel_CAF1	4,050,938 – 4,051,044	- - - - - - - - -	1594	4,050,938 – 4,051,044	-	5	120	74.71	-3.71	0.57	0.999914
908	2R_DroMel_CAF1	4,053,425 – 4,053,585	- - - - - - - - -	1595	4,053,425 – 4,053,545	+	5	120	89.03	-1.74	0.73	0.597814
				1596	4,053,425 – 4,053,545	-	5	120	89.03	-2.87	0.85	0.999018
				1597	4,053,465 – 4,053,585	-	5	120	90.45	-1.54	0.85	0.835987
909	2R_DroMel_CAF1	4,054,362 – 4,054,594	- - - - - - - - -	1598	4,054,362 – 4,054,482	+	5	120	92.67	-2.12	0.79	0.930959
909	2R_DroMel_CAF1	4,054,362 – 4,054,594	- - - - - - - - -	1599	4,054,482 – 4,054,594	+	5	120	90.98	-1.61	0.82	0.820017
910	2R_DroMel_CAF1	4,054,628 – 4,054,771	- - - - - - - - -	1600	4,054,628 – 4,054,731	+	4	120	90.13	-2.53	0.87	0.982764
				1601	4,054,628 – 4,054,731	-	4	120	90.13	-1.94	0.96	0.967581
				1602	4,054,651 – 4,054,771	+	4	120	98.33	-2.54	0.97	0.938401
				1603	4,054,651 – 4,054,771	-	4	120	98.33	-2.86	0.98	0.966982
911	2R_DroMel_CAF1	4,054,927 – 4,055,162	- - - - - - - - -	1604	4,054,927 – 4,055,044	+	4	120	88.19	-1.56	0.84	0.687844
				1605	4,055,004 – 4,055,122	+	4	120	78.22	-2.58	0.46	0.701166
				1606	4,055,004 – 4,055,122	-	4	120	78.22	-1.83	0.57	0.515113
				1607	4,055,044 – 4,055,162	+	4	120	87.13	-1.47	0.71	0.538380
				1608	4,055,044 – 4,055,162	-	4	120	87.13	-1.36	0.79	0.500000
912	2R_DroMel_CAF1	4,055,662 – 4,055,755	- - - - - - - - -	1609	4,055,662 – 4,055,755	-	4	119	70.29	-1.97	0.65	0.992482
913	2R_DroMel_CAF1	4,056,055 – 4,056,173	- - - - - - - - -	1610	4,056,055 – 4,056,173	+	5	120	86.08	-1.70	0.68	0.500000
914	2R_DroMel_CAF1	4,057,140 – 4,057,444	- - - - - - - - -	1611	4,057,140 – 4,057,249	+	5	120	92.58	-1.20	0.89	0.617035
				1612	4,057,180 – 4,057,284	+	5	120	90.92	-1.21	0.88	0.536989
				1613	4,057,284 – 4,057,404	-	3	120	97.78	-2.72	0.93	0.955632
				1614	4,057,324 – 4,057,444	-	3	120	96.67	-1.34	1.03	0.636841
915	2R_DroMel_CAF1	4,057,955 – 4,058,097	- - - - - - - - -	1615	4,057,955 – 4,058,057	+	5	120	89.95	-2.80	0.87	0.999428
				1616	4,057,955 – 4,058,057	-	5	120	89.95	-1.93	0.75	0.774126
				1617	4,057,977 – 4,058,097	+	5	120	97.33	-1.41	0.93	0.880422
				1618	4,057,977 – 4,058,097	-	5	120	97.33	-2.04	0.94	0.997165
916	2R_DroMel_CAF1	4,058,188 – 4,058,308	- - - - - - - - -	1619	4,058,188 – 4,058,308	+	5	120	98.50	-1.76	0.93	0.971494
917	2R_DroMel_CAF1	4,059,662 – 4,059,782	- - - - - - - - -	1620	4,059,662 – 4,059,782	-	5	120	94.00	-2.01	0.76	0.728584
918	2R_DroMel_CAF1	4,060,898 – 4,061,015	- - - - - - - - -	1621	4,060,898 – 4,061,015	+	5	120	90.69	-1.42	0.93	0.902220
919	2R_DroMel_CAF1	4,061,335 – 4,061,455	- - - - - - - - -	1622	4,061,335 – 4,061,455	+	5	120	91.33	-2.28	0.83	0.990483
919	2R_DroMel_CAF1	4,061,335 – 4,061,455	- - - - - - - - -	1623	4,061,335 – 4,061,455	-	5	120	91.33	-2.61	0.78	0.980418
920	2R_DroMel_CAF1	4,062,202 – 4,062,439	- - - - - - - - -	1624	4,062,202 – 4,062,321	-	5	120	91.90	-1.55	0.84	0.836888
920	2R_DroMel_CAF1	4,062,202 – 4,062,439	- - - - - - - - -	1625	4,062,321 – 4,062,439	-	5	120	91.78	-1.30	0.86	0.652056
921	2R_DroMel_CAF1	4,063,163 – 4,063,274	- - - - - - - - -	1626	4,063,163 – 4,063,274	+	4	117	83.33	-2.31	0.66	0.902378
922	2R_DroMel_CAF1	4,063,394 – 4,063,513	- - - - - - - - -	1627	4,063,394 – 4,063,513	+	5	120	97.15	-2.14	0.95	0.998997
923	2R_DroMel_CAF1	4,064,938 – 4,065,116	- - - - - - - - -	1628	4,064,938 – 4,065,036	+	4	103	85.24	-1.42	0.77	0.522986
				1629	4,064,938 – 4,065,036	-	4	103	85.24	-2.22	0.74	0.913812
				1630	4,065,000 – 4,065,116	-	5	120	89.97	-1.71	0.90	0.963420
924	2R_DroMel_CAF1	4,065,187 – 4,065,478	- - - - - - - - -	1631	4,065,187 – 4,065,307	-	5	120	92.50	-1.84	0.82	0.937827
				1632	4,065,227 – 4,065,347	-	5	120	92.83	-2.22	0.80	0.967051
				1633	4,065,347 – 4,065,467	-	5	120	91.88	-1.36	0.80	0.508689
				1634	4,065,387 – 4,065,478	-	4	91	86.09	-2.33	0.78	0.945311
925	2R_DroMel_CAF1	4,065,523 – 4,065,683	- - - - - - - - -	1635	4,065,523 – 4,065,643	-	4	120	85.69	-2.13	0.83	0.939654
925	2R_DroMel_CAF1	4,065,523 – 4,065,683	- - - - - - - - -	1636	4,065,563 – 4,065,683	-	5	120	71.86	-1.90	0.58	0.944027
926	2R_DroMel_CAF1	4,065,845 – 4,065,965	- - - - - - - - -	1637	4,065,845 – 4,065,965	+	4	120	91.88	-2.18	0.82	0.890922
927	2R_DroMel_CAF1	4,066,264 – 4,066,354	- - - - - - - - -	1638	4,066,264 – 4,066,354	-	5	120	85.58	-1.68	0.98	0.931718
928	2R_DroMel_CAF1	4,066,465 – 4,066,585	- - - - - - - - -	1639	4,066,465 – 4,066,585	+	5	120	91.50	-1.44	0.79	0.548362
929	2R_DroMel_CAF1	4,066,664 – 4,066,927	- - - - - - - - -	1640	4,066,664 – 4,066,784	+	5	120	94.58	-1.48	0.81	0.604117
				1641	4,066,744 – 4,066,847	-	5	120	70.75	-0.81	0.71	0.529742
				1642	4,066,816 – 4,066,927	+	5	120	80.18	-2.28	0.66	0.952118
930	2R_DroMel_CAF1	4,067,684 – 4,067,786	- - - - - - - - -	1643	4,067,684 – 4,067,786	+	3	117	74.85	-1.94	0.69	0.988172
931	2R_DroMel_CAF1	4,067,915 – 4,068,068	- - - - - - - - -	1644	4,067,915 – 4,068,028	-	4	113	91.74	-1.58	0.83	0.653704
931	2R_DroMel_CAF1	4,067,915 – 4,068,068	- - - - - - - - -	1645	4,067,955 – 4,068,068	-	5	120	90.59	-1.94	0.77	0.839798
932	2R_DroMel_CAF1	4,068,170 – 4,068,290	- - - - - - - - -	1646	4,068,170 – 4,068,290	+	5	120	91.92	-1.78	0.85	0.952240
933	2R_DroMel_CAF1	4,068,738 – 4,068,853	- - - - - - - - -	1647	4,068,738 – 4,068,853	+	5	120	85.43	-1.80	0.74	0.718159
933	2R_DroMel_CAF1	4,068,738 – 4,068,853	- - - - - - - - -	1648	4,068,738 – 4,068,853	-	5	120	85.43	-1.62	0.78	0.636630
934	2R_DroMel_CAF1	4,069,760 – 4,069,954	- - - - - - - - -	1649	4,069,760 – 4,069,875	+	5	120	91.96	-3.38	0.92	0.999979
				1650	4,069,760 – 4,069,875	-	5	120	91.96	-2.89	0.85	0.999419
				1651	4,069,800 – 4,069,914	+	5	120	91.92	-2.01	0.96	0.999233
				1652	4,069,840 – 4,069,954	+	5	120	92.78	-1.48	0.89	0.909528
935	2R_DroMel_CAF1	4,070,033 – 4,070,192	- - - - - - - - -	1653	4,070,033 – 4,070,152	-	5	120	91.11	-2.21	0.78	0.943399
				1654	4,070,072 – 4,070,192	+	5	120	91.58	-1.64	0.80	0.787311
				1655	4,070,072 – 4,070,192	-	5	120	91.58	-1.82	0.80	0.868226
936	2R_DroMel_CAF1	4,070,405 – 4,070,514	- - - - - - - - -	1656	4,070,405 – 4,070,514	-	5	120	74.47	-2.00	0.22	0.931392
937	2R_DroMel_CAF1	4,070,793 – 4,070,898	- - - - - - - - -	1657	4,070,793 – 4,070,898	-	5	120	87.62	-2.74	0.74	0.967661
938	2R_DroMel_CAF1	4,071,006 – 4,071,159	- - - - - - - - -	1658	4,071,006 – 4,071,119	+	5	120	91.28	-1.26	0.86	0.599833
938	2R_DroMel_CAF1	4,071,006 – 4,071,159	- - - - - - - - -	1659	4,071,046 – 4,071,159	+	5	120	90.07	-2.21	0.87	0.994876
939	2R_DroMel_CAF1	4,071,196 – 4,071,739	- - - - - - - - -	1660	4,071,196 – 4,071,316	+	5	120	97.83	-2.77	0.93	0.999611
				1661	4,071,236 – 4,071,355	+	5	120	97.67	-1.48	0.96	0.939541
				1662	4,071,276 – 4,071,381	-	5	120	88.56	-1.78	0.80	0.841982
				1663	4,071,381 – 4,071,499	+	5	120	93.69	-2.42	0.87	0.998407
				1664	4,071,381 – 4,071,499	-	5	120	93.69	-1.14	0.90	0.565310
				1665	4,071,419 – 4,071,539	+	5	120	97.67	-1.94	0.95	0.996105
				1666	4,071,419 – 4,071,539	-	5	120	97.67	-1.61	0.97	0.980390
				1667	4,071,459 – 4,071,579	-	5	120	97.83	-1.78	1.00	0.995111
				1668	4,071,499 – 4,071,619	-	5	120	97.83	-1.33	0.98	0.878216
				1669	4,071,619 – 4,071,739	+	5	120	83.60	-2.10	0.62	0.691877
940	2R_DroMel_CAF1	4,073,445 – 4,073,760	- - - - - - - - -	1670	4,073,445 – 4,073,560	+	5	120	86.75	-1.68	0.85	0.817813
				1671	4,073,445 – 4,073,560	-	5	120	86.75	-2.93	0.73	0.976183
				1672	4,073,480 – 4,073,600	-	5	120	89.75	-1.69	0.72	0.514044
				1673	4,073,560 – 4,073,680	+	5	120	97.33	-1.93	0.95	0.996412
				1674	4,073,560 – 4,073,680	-	5	120	97.33	-1.66	0.94	0.974744
				1675	4,073,600 – 4,073,720	+	5	120	96.83	-3.87	0.90	0.999754
				1676	4,073,600 – 4,073,720	-	5	120	96.83	-1.86	0.88	0.970606
				1677	4,073,640 – 4,073,760	+	5	120	91.46	-2.53	0.78	0.969855
941	2R_DroMel_CAF1	4,073,800 – 4,073,920	- - - - - - - - -	1678	4,073,800 – 4,073,920	+	5	120	92.17	-1.99	0.78	0.894548
941	2R_DroMel_CAF1	4,073,800 – 4,073,920	- - - - - - - - -	1679	4,073,800 – 4,073,920	-	5	120	92.17	-2.09	0.73	0.695295
942	2R_DroMel_CAF1	4,073,960 – 4,074,066	- - - - - - - - -	1680	4,073,960 – 4,074,066	+	5	120	83.78	-1.66	0.75	0.634246
943	2R_DroMel_CAF1	4,074,801 – 4,075,158	- - - - - - - - -	1681	4,074,801 – 4,074,919	+	5	120	96.38	-1.27	0.91	0.699098
				1682	4,074,919 – 4,075,039	+	5	120	92.75	-2.21	0.84	0.992176
				1683	4,075,039 – 4,075,158	+	5	120	95.50	-1.56	0.87	0.903110
				1684	4,075,039 – 4,075,158	-	5	120	95.50	-1.30	0.86	0.569043
944	2R_DroMel_CAF1	4,076,315 – 4,076,595	- - - "knownCDS=Parent=FBtr0088735;Name=Cyp6a14-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8687-RB" - - - - -	1685	4,076,315 – 4,076,435	-	5	120	95.50	-1.14	0.91	0.552426
				1686	4,076,395 – 4,076,515	+	5	120	91.50	-1.82	0.82	0.925102
				1687	4,076,395 – 4,076,515	-	5	120	91.50	-1.63	0.87	0.935327
				1688	4,076,435 – 4,076,555	+	5	120	90.58	-2.45	0.80	0.987303
				1689	4,076,435 – 4,076,555	-	5	120	90.58	-3.08	0.88	0.999867
				1690	4,076,475 – 4,076,595	+	5	120	92.50	-1.62	0.76	0.558087
				1691	4,076,475 – 4,076,595	-	5	120	92.50	-2.01	0.79	0.898099
945	2R_DroMel_CAF1	4,076,795 – 4,076,915	- - - "knownCDS=Parent=FBtr0088735;Name=Cyp6a14-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8687-RB" - - - - -	1692	4,076,795 – 4,076,915	-	5	120	93.00	-1.43	0.90	0.910697
946	2R_DroMel_CAF1	4,077,195 – 4,077,315	- - - "knownCDS=Parent=FBtr0088735;Name=Cyp6a14-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8687-RB" - - - - -	1693	4,077,195 – 4,077,315	+	5	120	94.33	-1.44	0.83	0.648133
947	2R_DroMel_CAF1	4,077,633 – 4,077,753	- - - "knownCDS=Parent=FBtr0088734;Name=Cyp6a14-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8687-RA" - - - - -	1694	4,077,633 – 4,077,753	+	5	120	91.67	-1.96	0.78	0.875661
947	2R_DroMel_CAF1	4,077,633 – 4,077,753		1695	4,077,633 – 4,077,753	-	5	120	91.67	-1.50	0.79	0.604271
948	2R_DroMel_CAF1	4,079,448 – 4,079,566	- - - - - - - - -	1696	4,079,448 – 4,079,566	+	5	120	93.93	-1.92	0.78	0.786097
949	2R_DroMel_CAF1	4,079,686 – 4,079,803	- - - - - - - - -	1697	4,079,686 – 4,079,803	-	4	120	79.17	-1.92	0.63	0.778254
950	2R_DroMel_CAF1	4,083,583 – 4,083,703	- - - "knownCDS=Parent=FBtr0088690;Name=Cyp6a13-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2397-RA" - - - - -	1698	4,083,583 – 4,083,703	-	5	120	89.00	-1.87	0.78	0.845171
951	2R_DroMel_CAF1	4,093,990 – 4,094,090	- - - "knownCDS=Parent=FBtr0088732;Name=CG14747-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14747-RA" - - - - -	1699	4,093,990 – 4,094,090	+	6	120	87.69	-1.45	0.86	0.500000
952	2R_DroMel_CAF1	4,095,393 – 4,095,485	- - - - - - - - -	1700	4,095,393 – 4,095,485	-	6	111	77.76	-1.44	0.65	0.738723
953	2R_DroMel_CAF1	4,096,573 – 4,096,684	- - - - - - - - -	1701	4,096,573 – 4,096,684	+	5	120	82.33	-2.48	0.70	0.962940
954	2R_DroMel_CAF1	4,097,729 – 4,097,822	- - - - - - - - -	1702	4,097,729 – 4,097,822	+	4	96	76.01	-2.21	0.53	0.871866
955	2R_DroMel_CAF1	4,098,257 – 4,098,364	- - - - - - - - -	1703	4,098,257 – 4,098,364	-	3	107	96.26	-2.14	0.94	0.884275
956	2R_DroMel_CAF1	4,099,513 – 4,099,613	- - - - - - - - -	1704	4,099,513 – 4,099,613	+	3	100	91.72	-1.45	0.94	0.555215
957	2R_DroMel_CAF1	4,100,067 – 4,100,178	- - - - - - - - -	1705	4,100,067 – 4,100,161	+	3	95	95.09	-3.48	0.94	0.987398
				1706	4,100,067 – 4,100,161	-	3	95	95.09	-2.70	0.91	0.941441
				1707	4,100,082 – 4,100,178	+	4	120	66.33	-1.98	0.64	0.997104
				1708	4,100,082 – 4,100,178	-	4	120	66.33	-2.65	0.48	0.996911
958	2R_DroMel_CAF1	4,100,869 – 4,100,960	- - - - - - - - -	1709	4,100,869 – 4,100,960	+	3	91	97.80	-2.33	0.96	0.936953
959	2R_DroMel_CAF1	4,104,626 – 4,104,742	- - - - - - - - -	1710	4,104,626 – 4,104,742	+	4	120	83.47	-1.68	0.69	0.645677
959	2R_DroMel_CAF1	4,104,626 – 4,104,742	- - - - - - - - -	1711	4,104,626 – 4,104,742	-	4	120	83.47	-1.75	0.69	0.692237
960	2R_DroMel_CAF1	4,106,396 – 4,106,491	- - - - - - - - -	1712	4,106,396 – 4,106,491	+	6	108	62.86	-1.89	0.58	0.958491
960	2R_DroMel_CAF1	4,106,396 – 4,106,491	- - - - - - - - -	1713	4,106,396 – 4,106,491	-	6	108	62.86	-1.51	0.57	0.870947
961	2R_DroMel_CAF1	4,106,607 – 4,106,699	- - - - - - - - -	1714	4,106,607 – 4,106,699	+	4	95	90.73	-2.28	0.73	0.749740
962	2R_DroMel_CAF1	4,108,179 – 4,108,273	- - - - - - - - -	1715	4,108,179 – 4,108,273	+	5	97	75.37	-1.73	0.61	0.788929
963	2R_DroMel_CAF1	4,108,922 – 4,109,028	- - - - - - - - -	1716	4,108,922 – 4,109,028	-	3	110	95.71	-1.28	1.01	0.548945
964	2R_DroMel_CAF1	4,110,035 – 4,110,144	- - - - - - - - -	1717	4,110,035 – 4,110,144	+	6	112	73.22	-1.61	0.51	0.584876
964	2R_DroMel_CAF1	4,110,035 – 4,110,144	- - - - - - - - -	1718	4,110,035 – 4,110,144	-	6	112	73.22	-1.62	0.55	0.740831
965	2R_DroMel_CAF1	4,110,336 – 4,110,452	- - - - - - - - -	1719	4,110,336 – 4,110,452	-	6	116	73.11	-1.43	0.62	0.789587
966	2R_DroMel_CAF1	4,112,443 – 4,112,563	- - - "knownCDS=Parent=FBtr0088692;Name=rgr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8643-RA" - - - - -	1720	4,112,443 – 4,112,563	+	5	120	92.92	-1.33	0.83	0.582192
967	2R_DroMel_CAF1	4,113,421 – 4,113,538	- - - - - - - - -	1721	4,113,421 – 4,113,538	-	5	120	89.68	-2.31	0.80	0.976267
968	2R_DroMel_CAF1	4,113,705 – 4,113,822	- - - - - - - - -	1722	4,113,705 – 4,113,822	+	4	119	91.60	-2.48	0.76	0.847314
968	2R_DroMel_CAF1	4,113,705 – 4,113,822	- - - - - - - - -	1723	4,113,705 – 4,113,822	-	4	119	91.60	-3.90	0.71	0.699138
969	2R_DroMel_CAF1	4,115,281 – 4,115,378	- - - - - - - - -	1724	4,115,281 – 4,115,378	+	4	98	88.59	-2.22	0.73	0.843533
969	2R_DroMel_CAF1	4,115,281 – 4,115,378	- - - - - - - - -	1725	4,115,281 – 4,115,378	-	4	98	88.59	-1.61	0.75	0.633760
970	2R_DroMel_CAF1	4,116,509 – 4,116,603	- - - - - - - - -	1726	4,116,509 – 4,116,603	+	5	110	82.09	-1.94	0.61	0.664932
970	2R_DroMel_CAF1	4,116,509 – 4,116,603	- - - - - - - - -	1727	4,116,509 – 4,116,603	-	5	110	82.09	-2.24	0.63	0.869111
971	2R_DroMel_CAF1	4,116,789 – 4,117,038	- - - - - - - - -	1728	4,116,789 – 4,116,897	-	4	108	90.62	-1.71	0.86	0.810169
				1729	4,116,897 – 4,117,009	+	3	120	73.30	-1.38	0.66	0.734648
				1730	4,116,937 – 4,117,038	+	3	120	75.73	-1.67	0.76	0.956719
972	2R_DroMel_CAF1	4,117,498 – 4,117,602	- - - - - - - - -	1731	4,117,498 – 4,117,602	+	4	112	89.26	-2.31	0.66	0.600827
972	2R_DroMel_CAF1	4,117,498 – 4,117,602	- - - - - - - - -	1732	4,117,498 – 4,117,602	-	4	112	89.26	-1.50	0.75	0.549585
973	2R_DroMel_CAF1	4,118,887 – 4,118,993	- - - - - - - - -	1733	4,118,887 – 4,118,993	+	3	111	92.00	-2.66	0.75	0.630187
974	2R_DroMel_CAF1	4,119,059 – 4,119,174	- - - - - - - - -	1734	4,119,059 – 4,119,174	+	3	120	80.11	-1.96	0.60	0.594089
975	2R_DroMel_CAF1	4,121,589 – 4,121,693	- - - - - - - - -	1735	4,121,589 – 4,121,693	+	6	108	81.32	-1.59	0.81	0.769682
975	2R_DroMel_CAF1	4,121,589 – 4,121,693	- - - - - - - - -	1736	4,121,589 – 4,121,693	-	6	108	81.32	-1.80	0.81	0.837014
976	2R_DroMel_CAF1	4,123,188 – 4,123,283	- - - - - - - - -	1737	4,123,188 – 4,123,283	+	6	95	86.72	-2.01	0.84	0.794787
976	2R_DroMel_CAF1	4,123,188 – 4,123,283	- - - - - - - - -	1738	4,123,188 – 4,123,283	-	6	95	86.72	-2.52	0.90	0.984513
977	2R_DroMel_CAF1	4,124,822 – 4,124,923	- - - "knownCDS=Parent=FBtr0088729;Name=CG8642-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8642-RA" - - - - -	1739	4,124,822 – 4,124,923	+	6	105	77.45	-1.35	0.61	0.526565
977	2R_DroMel_CAF1	4,124,822 – 4,124,923		1740	4,124,822 – 4,124,923	-	6	105	77.45	-1.10	0.74	0.711129
978	2R_DroMel_CAF1	4,128,704 – 4,128,815	- - - "knownCDS=Parent=FBtr0088693;Name=Cirl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8639-RA" - - - - -	1741	4,128,704 – 4,128,815	-	6	111	77.24	-1.35	0.63	0.603595
979	2R_DroMel_CAF1	4,132,307 – 4,132,400	- - - "knownCDS=Parent=FBtr0088693;Name=Cirl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8639-RA" - - - - -	1742	4,132,307 – 4,132,400	+	6	120	74.20	-1.61	0.54	0.638517
980	2R_DroMel_CAF1	4,134,095 – 4,134,231	- - - "knownCDS=Parent=FBtr0088693;Name=Cirl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8639-RA" - - - - -	1743	4,134,095 – 4,134,200	+	6	120	80.08	-2.72	0.65	0.949604
				1744	4,134,095 – 4,134,200	-	6	120	80.08	-2.84	0.67	0.958266
				1745	4,134,135 – 4,134,231	+	6	120	80.47	-2.13	0.69	0.886622
981	2R_DroMel_CAF1	4,134,980 – 4,135,091	- - - "knownCDS=Parent=FBtr0088693;Name=Cirl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8639-RA" - - - - -	1746	4,134,980 – 4,135,091	-	6	114	79.08	-1.57	0.62	0.648627
982	2R_DroMel_CAF1	4,135,848 – 4,135,944	- - - - - - - - -	1747	4,135,848 – 4,135,944	-	6	100	92.47	-1.40	0.92	0.893160
983	2R_DroMel_CAF1	4,138,054 – 4,138,171	- - - - - - - - -	1748	4,138,054 – 4,138,171	-	5	120	79.49	-2.00	0.58	0.795663
984	2R_DroMel_CAF1	4,138,243 – 4,138,362	- - - "knownCDS=Parent=FBtr0088728;Name=CG8734-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8734-RA" - - - - -	1749	4,138,243 – 4,138,362	-	5	119	92.44	-1.51	0.92	0.953968
985	2R_DroMel_CAF1	4,139,009 – 4,139,129	- - - "knownCDS=Parent=FBtr0088728;Name=CG8734-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8734-RA" - - - - -	1750	4,139,009 – 4,139,129	-	4	120	90.42	-1.39	0.81	0.500000
986	2R_DroMel_CAF1	4,139,135 – 4,139,254	- - - "knownCDS=Parent=FBtr0088728;Name=CG8734-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8734-RA" - - - - -	1751	4,139,135 – 4,139,254	+	4	119	90.48	-1.87	0.77	0.740500
986	2R_DroMel_CAF1	4,139,135 – 4,139,254		1752	4,139,135 – 4,139,254	-	4	119	90.48	-1.71	0.81	0.739172
987	2R_DroMel_CAF1	4,142,166 – 4,142,256	- - - "knownCDS=Parent=FBtr0088727;Name=CG8635-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8635-RA" - - - - -	1753	4,142,166 – 4,142,256	+	6	96	83.55	-2.10	0.70	0.635946
987	2R_DroMel_CAF1	4,142,166 – 4,142,256		1754	4,142,166 – 4,142,256	-	6	96	83.55	-2.24	0.66	0.597214
988	2R_DroMel_CAF1	4,144,950 – 4,145,044	- - - - - - - - -	1755	4,144,950 – 4,145,044	+	3	94	78.87	-1.48	0.72	0.635541
989	2R_DroMel_CAF1	4,146,788 – 4,146,901	- - - - - - - - -	1756	4,146,788 – 4,146,878	-	4	107	84.77	-1.91	0.75	0.829221
989	2R_DroMel_CAF1	4,146,788 – 4,146,901	- - - - - - - - -	1757	4,146,809 – 4,146,901	-	6	108	73.33	-1.60	0.66	0.938480
990	2R_DroMel_CAF1	4,159,050 – 4,159,165	- - - - - - - - -	1758	4,159,050 – 4,159,165	-	4	116	74.17	-1.93	0.56	0.817691
991	2R_DroMel_CAF1	4,161,268 – 4,161,366	- - - - - - - - -	1759	4,161,268 – 4,161,366	-	5	99	87.12	-1.97	0.83	0.933089
992	2R_DroMel_CAF1	4,162,951 – 4,163,069	- - - - - - - - -	1760	4,162,951 – 4,163,069	+	5	118	74.57	-1.99	0.32	0.888576
993	2R_DroMel_CAF1	4,166,775 – 4,166,865	- - - - - - - - -	1761	4,166,775 – 4,166,865	+	6	105	83.39	-2.16	0.62	0.509270
994	2R_DroMel_CAF1	4,173,689 – 4,173,806	- - - "knownCDS=Parent=FBtr0089427;Name=ptc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2411-RA" - - - - -	1762	4,173,689 – 4,173,806	+	6	120	80.88	-1.30	0.67	0.515311
995	2R_DroMel_CAF1	4,176,015 – 4,176,174	- - - "knownCDS=Parent=FBtr0089427;Name=ptc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2411-RA" - - - - -	1763	4,176,015 – 4,176,135	+	6	120	90.72	-2.16	0.84	0.867337
995	2R_DroMel_CAF1	4,176,015 – 4,176,174		1764	4,176,055 – 4,176,174	+	6	120	88.77	-1.90	0.93	0.977878
996	2R_DroMel_CAF1	4,178,129 – 4,178,227	- - - - - - - - -	1765	4,178,129 – 4,178,227	+	4	98	95.24	-1.69	0.94	0.815211
996	2R_DroMel_CAF1	4,178,129 – 4,178,227	- - - - - - - - -	1766	4,178,129 – 4,178,227	-	4	98	95.24	-1.77	0.86	0.658423
997	2R_DroMel_CAF1	4,187,896 – 4,188,016	- - - - - - - - -	1767	4,187,896 – 4,188,016	-	3	120	91.01	-1.96	0.97	0.936723
998	2R_DroMel_CAF1	4,196,611 – 4,196,709	- - - - - - - - -	1768	4,196,611 – 4,196,709	-	6	118	76.30	-2.15	0.38	0.546149
999	2R_DroMel_CAF1	4,196,826 – 4,196,919	- - - - - - - - -	1769	4,196,826 – 4,196,919	+	6	104	87.24	-1.68	0.93	0.910376
1000	2R_DroMel_CAF1	4,200,021 – 4,200,126	- - - - - - - - -	1770	4,200,021 – 4,200,126	-	6	120	93.33	-1.38	0.96	0.976580
1001	2R_DroMel_CAF1	4,203,772 – 4,203,892	- - - "knownCDS=Parent=FBtr0088704;Name=Jon44E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8579-RA" - - - - -	1771	4,203,772 – 4,203,892	+	5	120	89.42	-1.83	0.78	0.828890
1002	2R_DroMel_CAF1	4,205,923 – 4,206,163	- - - "knownCDS=Parent=FBtr0088725;Name=CG8586-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8586-RA" - - - - -	1772	4,205,923 – 4,206,043	+	5	120	94.00	-1.84	0.91	0.994388
				1773	4,205,963 – 4,206,083	+	5	120	92.17	-1.69	0.78	0.722405
				1774	4,206,043 – 4,206,163	+	5	120	90.83	-1.53	0.84	0.809914
1003	2R_DroMel_CAF1	4,207,635 – 4,207,728	- - - - - - - - -	1775	4,207,635 – 4,207,728	+	4	120	75.04	-1.72	0.58	0.554509
1004	2R_DroMel_CAF1	4,208,124 – 4,208,220	- - - - - - - - -	1776	4,208,124 – 4,208,220	-	4	112	83.38	-1.62	0.76	0.659845
1005	2R_DroMel_CAF1	4,208,448 – 4,208,568	- - - "knownCDS=Parent=FBtr0088705;Name=CG8738-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8738-RA" - - - - -	1777	4,208,448 – 4,208,568	-	5	120	94.33	-1.14	0.89	0.531764
1006	2R_DroMel_CAF1	4,209,702 – 4,209,798	- - - "knownCDS=Parent=FBtr0088705;Name=CG8738-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8738-RA" - - - - -	1778	4,209,702 – 4,209,798	+	5	96	94.48	-2.68	0.88	0.999615
1006	2R_DroMel_CAF1	4,209,702 – 4,209,798		1779	4,209,702 – 4,209,798	-	5	96	94.48	-1.48	0.92	0.954821
1007	2R_DroMel_CAF1	4,210,467 – 4,210,561	- - - - - - - - -	1780	4,210,467 – 4,210,561	+	3	112	85.71	-3.52	0.73	0.964895
1007	2R_DroMel_CAF1	4,210,467 – 4,210,561	- - - - - - - - -	1781	4,210,467 – 4,210,561	-	3	112	85.71	-1.75	0.87	0.744241
1008	2R_DroMel_CAF1	4,210,757 – 4,210,916	- - - - - - - - -	1782	4,210,757 – 4,210,876	-	5	120	91.40	-1.64	0.77	0.633896
1008	2R_DroMel_CAF1	4,210,757 – 4,210,916	- - - - - - - - -	1783	4,210,797 – 4,210,916	-	5	120	87.37	-1.86	0.75	0.749457
1009	2R_DroMel_CAF1	4,212,067 – 4,212,183	- - - - - - - - -	1784	4,212,067 – 4,212,183	+	5	120	91.66	-1.91	0.76	0.768468
1009	2R_DroMel_CAF1	4,212,067 – 4,212,183	- - - - - - - - -	1785	4,212,067 – 4,212,183	-	5	120	91.66	-1.85	0.78	0.808025
1010	2R_DroMel_CAF1	4,212,857 – 4,213,094	- - - "knownCDS=Parent=FBtr0088724;Name=CG8584-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8584-RA" - - - - -	1786	4,212,857 – 4,212,977	+	5	120	89.58	-2.22	0.75	0.893530
				1787	4,212,857 – 4,212,977	-	5	120	89.58	-2.74	0.84	0.998239
				1788	4,212,977 – 4,213,094	+	5	120	87.57	-2.10	0.74	0.849176
1011	2R_DroMel_CAF1	4,213,834 – 4,213,994	- - - "knownCDS=Parent=FBtr0088706;Name=CG12376-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12376-RA" - - - - -	1789	4,213,834 – 4,213,954	+	4	120	92.22	-2.48	0.87	0.973380
				1790	4,213,834 – 4,213,954	-	4	120	92.22	-1.96	0.84	0.866857
				1791	4,213,874 – 4,213,994	+	4	120	90.56	-1.58	0.81	0.648867
1012	2R_DroMel_CAF1	4,215,408 – 4,215,568	- - - "knownCDS=Parent=FBtr0088706;Name=CG12376-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12376-RA" - - - - -	1792	4,215,408 – 4,215,528	+	4	120	88.61	-2.19	0.81	0.924803
				1793	4,215,408 – 4,215,528	-	4	120	88.61	-2.44	0.74	0.905283
				1794	4,215,448 – 4,215,568	+	4	120	92.08	-1.41	0.85	0.520210
1013	2R_DroMel_CAF1	4,215,763 – 4,215,883	- - - "knownCDS=Parent=FBtr0088706;Name=CG12376-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12376-RA" - - - - -	1795	4,215,763 – 4,215,883	+	4	120	93.75	-1.47	0.92	0.659887
1014	2R_DroMel_CAF1	4,216,003 – 4,216,241	- - - "knownCDS=Parent=FBtr0088706;Name=CG12376-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12376-RA" - - - - -	1796	4,216,003 – 4,216,123	+	4	120	92.36	-2.70	0.85	0.972374
				1797	4,216,003 – 4,216,123	-	4	120	92.36	-2.57	0.81	0.923608
				1798	4,216,043 – 4,216,163	+	4	120	93.47	-2.38	0.93	0.985196
				1799	4,216,043 – 4,216,163	-	4	120	93.47	-1.61	0.96	0.852522
				1800	4,216,123 – 4,216,241	+	4	120	86.27	-1.60	0.74	0.643574
1015	2R_DroMel_CAF1	4,216,702 – 4,216,822	- - - - - - - - -	1801	4,216,702 – 4,216,822	+	4	120	88.75	-1.96	0.65	0.500000
1015	2R_DroMel_CAF1	4,216,702 – 4,216,822	- - - - - - - - -	1802	4,216,702 – 4,216,822	-	4	120	88.75	-2.38	0.66	0.678171
1016	2R_DroMel_CAF1	4,217,583 – 4,217,693	- - - - - - - - -	1803	4,217,583 – 4,217,693	+	4	120	92.05	-1.58	0.87	0.724541
1017	2R_DroMel_CAF1	4,217,912 – 4,218,032	- - - - - - - - -	1804	4,217,912 – 4,218,032	-	4	120	86.25	-1.40	0.73	0.516471
1018	2R_DroMel_CAF1	4,220,586 – 4,220,706	- - - "knownCDS=Parent=FBtr0088723;Name=CG14744-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14744-RA" - - - - -	1805	4,220,586 – 4,220,706	+	5	120	94.17	-1.36	0.87	0.762819
1018	2R_DroMel_CAF1	4,220,586 – 4,220,706		1806	4,220,586 – 4,220,706	-	5	120	94.17	-1.48	0.84	0.784305
1019	2R_DroMel_CAF1	4,222,296 – 4,222,496	- - - "knownCDS=Parent=FBtr0088722;Name=CG14743-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14743-RA" - - - - -	1807	4,222,296 – 4,222,416	-	5	120	93.33	-1.53	0.83	0.798493
				1808	4,222,336 – 4,222,456	-	5	120	92.50	-1.61	0.78	0.649352
				1809	4,222,376 – 4,222,496	+	5	120	89.83	-2.18	0.84	0.988029
1020	2R_DroMel_CAF1	4,222,994 – 4,223,114	- - - "knownCDS=Parent=FBtr0088722;Name=CG14743-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14743-RA" - - - - -	1810	4,222,994 – 4,223,114	-	5	120	89.16	-1.44	0.80	0.591486
1021	2R_DroMel_CAF1	4,223,269 – 4,223,429	- - - "knownCDS=Parent=FBtr0088722;Name=CG14743-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14743-RA" - - - - -	1811	4,223,269 – 4,223,389	+	5	120	91.42	-2.04	0.84	0.984191
				1812	4,223,269 – 4,223,389	-	5	120	91.42	-2.05	0.82	0.965223
				1813	4,223,309 – 4,223,429	-	5	120	90.67	-1.33	0.82	0.533560
1022	2R_DroMel_CAF1	4,224,080 – 4,224,200	- - - "knownCDS=Parent=FBtr0088722;Name=CG14743-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14743-RA" - - - - -	1814	4,224,080 – 4,224,200	-	5	120	95.08	-1.12	0.91	0.519678
1023	2R_DroMel_CAF1	4,225,592 – 4,225,752	- - - "knownCDS=Parent=FBtr0088708;Name=PGRP-SC1b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8577-RA" - - - - -	1815	4,225,592 – 4,225,712	-	5	120	96.67	-1.19	0.95	0.704941
1023	2R_DroMel_CAF1	4,225,592 – 4,225,752		1816	4,225,632 – 4,225,752	-	5	120	97.67	-1.99	0.97	0.997791
1024	2R_DroMel_CAF1	4,226,210 – 4,226,518	- - - - - - - - -	1817	4,226,210 – 4,226,324	+	5	120	94.50	-1.97	0.85	0.979837
				1818	4,226,284 – 4,226,404	+	5	120	96.15	-1.59	0.99	0.991216
				1819	4,226,284 – 4,226,404	-	5	120	96.15	-1.83	0.96	0.996881
				1820	4,226,404 – 4,226,518	-	5	120	93.50	-1.13	0.92	0.615066
1025	2R_DroMel_CAF1	4,229,889 – 4,230,009	- - - - - - - - -	1821	4,229,889 – 4,230,009	-	5	120	95.83	-1.32	0.86	0.564070
1026	2R_DroMel_CAF1	4,230,129 – 4,230,249	- - - - - - - - -	1822	4,230,129 – 4,230,249	+	5	120	95.17	-1.97	0.90	0.995374
1026	2R_DroMel_CAF1	4,230,129 – 4,230,249	- - - - - - - - -	1823	4,230,129 – 4,230,249	-	5	120	95.17	-1.78	0.87	0.969835
1027	2R_DroMel_CAF1	4,231,338 – 4,231,450	- - "RNAmicro=f:4231338_t:4231454_strand:-_p:0.997630" - - - - - -	1824	4,231,338 – 4,231,450	+	5	117	78.61	-3.24	0.72	0.999118
1027	2R_DroMel_CAF1	4,231,338 – 4,231,450		1825	4,231,338 – 4,231,450	-	5	117	78.61	-3.37	0.73	0.999317
1028	2R_DroMel_CAF1	4,233,814 – 4,233,951	- - - - - - - - -	1826	4,233,814 – 4,233,919	+	6	116	84.60	-3.73	0.77	0.940183
1028	2R_DroMel_CAF1	4,233,814 – 4,233,951	- - - - - - - - -	1827	4,233,853 – 4,233,951	+	6	117	77.26	-1.98	0.56	0.864578
1029	2R_DroMel_CAF1	4,236,590 – 4,236,704	- - - - - - - - -	1828	4,236,590 – 4,236,704	+	5	114	87.02	-1.64	0.80	0.712365
1030	2R_DroMel_CAF1	4,239,616 – 4,239,706	- - - - - - - - -	1829	4,239,616 – 4,239,706	+	6	90	82.33	-1.22	0.86	0.500000
1030	2R_DroMel_CAF1	4,239,616 – 4,239,706	- - - - - - - - -	1830	4,239,616 – 4,239,706	-	6	90	82.33	-1.64	0.81	0.728495
1031	2R_DroMel_CAF1	4,240,507 – 4,240,599	- - - - - - - - -	1831	4,240,507 – 4,240,599	+	6	97	82.61	-1.71	0.72	0.637532
1031	2R_DroMel_CAF1	4,240,507 – 4,240,599	- - - - - - - - -	1832	4,240,507 – 4,240,599	-	6	97	82.61	-2.46	0.70	0.811275
1032	2R_DroMel_CAF1	4,241,154 – 4,241,247	- - - "knownCDS=Parent=FBtr0088717;Name=CG30356-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30356-RA" - - - - -	1833	4,241,154 – 4,241,247	+	6	98	73.17	-2.02	0.40	0.765769
1033	2R_DroMel_CAF1	4,241,516 – 4,241,634	- - - "knownCDS=Parent=FBtr0100111;Name=cmp44E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8739-RC" - - - - -	1834	4,241,516 – 4,241,634	+	6	120	72.03	-1.32	0.58	0.559410
1034	2R_DroMel_CAF1	4,241,758 – 4,241,850	- - - - - - - - -	1835	4,241,758 – 4,241,850	-	3	93	86.02	-2.68	0.75	0.887558
1035	2R_DroMel_CAF1	4,242,294 – 4,242,414	- - - "knownCDS=Parent=FBtr0088716, FBtr0088715;Name=cmp44E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8739-RA, FlyBase+Annotation+IDs:CG8739-RB" - - - - -	1836	4,242,294 – 4,242,414	+	6	120	80.67	-1.38	0.68	0.607136
1036	2R_DroMel_CAF1	4,244,364 – 4,244,456	- - - "knownCDS=Parent=FBtr0088716, FBtr0088715;Name=cmp44E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8739-RA, FlyBase+Annotation+IDs:CG8739-RB" - - - - -	1837	4,244,364 – 4,244,456	+	6	106	77.84	-1.68	0.68	0.885716
1037	2R_DroMel_CAF1	4,249,551 – 4,249,647	- - - - - - - - -	1838	4,249,551 – 4,249,647	+	4	98	87.29	-1.59	0.68	0.558486
1038	2R_DroMel_CAF1	4,254,260 – 4,254,374	- - - - - - - - -	1839	4,254,260 – 4,254,374	+	6	118	81.87	-1.30	0.77	0.566693
1039	2R_DroMel_CAF1	4,269,342 – 4,269,463	- - - - - - - - -	1840	4,269,342 – 4,269,433	-	6	92	76.72	-1.08	0.67	0.555604
1039	2R_DroMel_CAF1	4,269,342 – 4,269,463	- - - - - - - - -	1841	4,269,370 – 4,269,463	-	6	94	79.89	-1.80	0.58	0.636062
1040	2R_DroMel_CAF1	4,270,720 – 4,270,835	- - - - - - - - -	1842	4,270,720 – 4,270,835	+	3	115	93.04	-1.63	0.90	0.512863
1041	2R_DroMel_CAF1	4,282,280 – 4,282,371	- - - - - - - - -	1843	4,282,280 – 4,282,371	-	6	108	69.65	-1.56	0.48	0.596940
1042	2R_DroMel_CAF1	4,282,842 – 4,282,937	- - - - - - - - -	1844	4,282,842 – 4,282,937	+	6	112	72.19	-2.05	0.49	0.945769
1043	2R_DroMel_CAF1	4,296,485 – 4,296,578	- - - - - - - - -	1845	4,296,485 – 4,296,578	-	6	95	81.53	-2.46	0.71	0.888458
1044	2R_DroMel_CAF1	4,299,118 – 4,299,218	- - - - - - - - -	1846	4,299,118 – 4,299,218	+	6	115	80.35	-1.75	0.61	0.648159
1044	2R_DroMel_CAF1	4,299,118 – 4,299,218	- - - - - - - - -	1847	4,299,118 – 4,299,218	-	6	115	80.35	-2.45	0.50	0.737665
1045	2R_DroMel_CAF1	4,302,034 – 4,302,162	- - - - - - - - -	1848	4,302,034 – 4,302,134	-	5	108	84.11	-1.63	0.67	0.500000
1045	2R_DroMel_CAF1	4,302,034 – 4,302,162	- - - - - - - - -	1849	4,302,064 – 4,302,162	-	5	106	83.79	-2.05	0.83	0.931024
1046	2R_DroMel_CAF1	4,305,901 – 4,306,035	- - - - - - - - -	1850	4,305,901 – 4,306,001	+	6	119	81.32	-1.99	0.67	0.781408
				1851	4,305,901 – 4,306,001	-	6	119	81.32	-1.83	0.58	0.523417
				1852	4,305,941 – 4,306,035	+	5	94	92.66	-2.14	0.85	0.991877
				1853	4,305,941 – 4,306,035	-	5	94	92.66	-2.22	0.78	0.931844
1047	2R_DroMel_CAF1	4,307,295 – 4,307,396	- - - - - - - - -	1854	4,307,295 – 4,307,396	+	5	102	94.04	-2.29	0.74	0.697660
1048	2R_DroMel_CAF1	4,310,594 – 4,310,700	- - - - - - - - -	1855	4,310,594 – 4,310,700	+	6	108	78.86	-1.95	0.69	0.918137
1049	2R_DroMel_CAF1	4,311,966 – 4,312,060	- - - - - - - - -	1856	4,311,966 – 4,312,060	-	6	97	86.09	-1.57	0.87	0.667381
1050	2R_DroMel_CAF1	4,312,400 – 4,312,494	- - - - - - - - -	1857	4,312,400 – 4,312,494	+	6	95	98.52	-0.82	0.94	0.525585
1051	2R_DroMel_CAF1	4,312,834 – 4,312,931	- - - - - - - - -	1858	4,312,834 – 4,312,931	-	4	111	79.39	-3.41	0.62	0.999083
1052	2R_DroMel_CAF1	4,314,889 – 4,314,996	- - - - - - - - -	1859	4,314,889 – 4,314,996	-	6	120	86.64	-1.99	0.83	0.723532
1053	2R_DroMel_CAF1	4,315,469 – 4,315,574	- - - - - - - - -	1860	4,315,469 – 4,315,574	-	4	109	82.57	-1.50	0.70	0.513939
1054	2R_DroMel_CAF1	4,319,349 – 4,319,567	- - - - - - - - -	1861	4,319,349 – 4,319,466	-	3	117	86.39	-3.15	0.71	0.914570
1054	2R_DroMel_CAF1	4,319,349 – 4,319,567	- - - - - - - - -	1862	4,319,466 – 4,319,567	-	5	113	84.82	-2.32	0.65	0.809932
1055	2R_DroMel_CAF1	4,319,970 – 4,320,079	- - - - - - - - -	1863	4,319,970 – 4,320,079	+	5	110	77.35	-2.08	0.43	0.824818
1055	2R_DroMel_CAF1	4,319,970 – 4,320,079	- - - - - - - - -	1864	4,319,970 – 4,320,079	-	5	110	77.35	-1.98	0.64	0.917766
1056	2R_DroMel_CAF1	4,320,679 – 4,320,769	- - - - - - - - -	1865	4,320,679 – 4,320,769	-	6	120	73.46	-2.18	0.34	0.735049
1057	2R_DroMel_CAF1	4,322,143 – 4,322,240	- - - - - - - - -	1866	4,322,143 – 4,322,240	-	5	99	95.11	-1.59	0.84	0.807861
1058	2R_DroMel_CAF1	4,323,538 – 4,323,636	- - - - - - - - -	1867	4,323,538 – 4,323,636	-	5	120	77.15	-2.06	0.16	0.915605
1059	2R_DroMel_CAF1	4,325,854 – 4,326,028	- - - - - - - - -	1868	4,325,854 – 4,325,964	-	6	120	67.82	-2.03	0.29	0.698200
1059	2R_DroMel_CAF1	4,325,854 – 4,326,028	- - - - - - - - -	1869	4,325,924 – 4,326,028	-	6	120	80.84	-2.07	0.62	0.780961
1060	2R_DroMel_CAF1	4,327,516 – 4,327,648	- - - - - - - - -	1870	4,327,516 – 4,327,636	-	5	120	99.00	-1.23	0.96	0.559940
				1871	4,327,556 – 4,327,648	+	5	93	96.54	-2.97	0.84	0.995779
				1872	4,327,556 – 4,327,648	-	5	93	96.54	-2.18	0.93	0.998989
1061	2R_DroMel_CAF1	4,327,985 – 4,328,159	- - - - - - - - -	1873	4,327,985 – 4,328,089	-	6	120	82.30	-2.58	0.54	0.604481
1061	2R_DroMel_CAF1	4,327,985 – 4,328,159	- - - - - - - - -	1874	4,328,064 – 4,328,159	+	5	120	70.14	-2.11	0.40	0.955470
1062	2R_DroMel_CAF1	4,328,557 – 4,328,647	- - - - - - - - -	1875	4,328,557 – 4,328,647	+	3	97	84.54	-2.09	0.73	0.726206
1063	2R_DroMel_CAF1	4,330,045 – 4,330,151	- - - - - - - - -	1876	4,330,045 – 4,330,151	+	5	116	70.98	-2.49	0.23	0.991641
1064	2R_DroMel_CAF1	4,330,991 – 4,331,150	- - - - - - - - -	1877	4,330,991 – 4,331,110	+	3	120	76.49	-2.05	0.65	0.965889
1064	2R_DroMel_CAF1	4,330,991 – 4,331,150	- - - - - - - - -	1878	4,331,030 – 4,331,150	+	3	120	80.71	-1.72	0.72	0.718029
1065	2R_DroMel_CAF1	4,338,411 – 4,338,511	- - - "knownCDS=Parent=FBtr0088636;Name=CG30350-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30350-RA" - - - - -	1879	4,338,411 – 4,338,511	+	6	112	78.85	-2.26	0.45	0.618045
1065	2R_DroMel_CAF1	4,338,411 – 4,338,511		1880	4,338,411 – 4,338,511	-	6	112	78.85	-2.39	0.40	0.500000
1066	2R_DroMel_CAF1	4,350,352 – 4,350,451	- - - - - - - - -	1881	4,350,352 – 4,350,451	+	4	100	87.85	-2.37	0.76	0.922831
1067	2R_DroMel_CAF1	4,350,538 – 4,350,629	- - - - - - - - -	1882	4,350,538 – 4,350,629	+	5	106	77.08	-1.72	0.64	0.782192
1067	2R_DroMel_CAF1	4,350,538 – 4,350,629	- - - - - - - - -	1883	4,350,538 – 4,350,629	-	5	106	77.08	-1.47	0.72	0.744573
1068	2R_DroMel_CAF1	4,352,036 – 4,352,138	- - - - - - - - -	1884	4,352,036 – 4,352,138	+	6	116	77.65	-1.80	0.55	0.681195
1069	2R_DroMel_CAF1	4,353,431 – 4,353,557	- - - - - - - - -	1885	4,353,431 – 4,353,529	+	6	109	84.38	-2.01	0.78	0.691264
1069	2R_DroMel_CAF1	4,353,431 – 4,353,557	- - - - - - - - -	1886	4,353,462 – 4,353,557	+	6	101	83.84	-3.37	0.67	0.838895
1070	2R_DroMel_CAF1	4,358,237 – 4,358,342	- - - - - - - - -	1887	4,358,237 – 4,358,342	+	5	105	95.81	-2.03	0.83	0.944670
1071	2R_DroMel_CAF1	4,361,682 – 4,361,780	- - - - - - - - -	1888	4,361,682 – 4,361,780	+	6	101	87.68	-2.51	0.83	0.892331
1072	2R_DroMel_CAF1	4,365,056 – 4,365,312	- - - - - - - - -	1889	4,365,056 – 4,365,165	+	4	116	86.03	-2.36	0.75	0.938822
				1890	4,365,056 – 4,365,165	-	4	116	86.03	-3.41	0.72	0.985894
				1891	4,365,089 – 4,365,205	+	5	116	88.99	-2.32	0.74	0.886351
				1892	4,365,089 – 4,365,205	-	5	116	88.99	-2.25	0.82	0.980496
				1893	4,365,205 – 4,365,312	-	5	107	87.17	-1.62	0.76	0.628019
1073	2R_DroMel_CAF1	4,365,952 – 4,366,053	- - - - - - - - -	1894	4,365,952 – 4,366,053	-	4	101	90.89	-1.70	0.81	0.718165
1074	2R_DroMel_CAF1	4,367,417 – 4,367,507	- - - - - - - - -	1895	4,367,417 – 4,367,507	+	3	90	92.42	-2.01	0.82	0.530949
1075	2R_DroMel_CAF1	4,368,647 – 4,368,746	- - - - - - - - -	1896	4,368,647 – 4,368,746	+	6	99	96.36	-1.62	0.92	0.974257
1075	2R_DroMel_CAF1	4,368,647 – 4,368,746	- - - - - - - - -	1897	4,368,647 – 4,368,746	-	6	99	96.36	-2.92	0.90	0.999426
1076	2R_DroMel_CAF1	4,370,614 – 4,370,704	- - - - - - - - -	1898	4,370,614 – 4,370,704	+	3	99	85.87	-1.82	0.77	0.566342
1077	2R_DroMel_CAF1	4,370,993 – 4,371,083	- - - - - - - - -	1899	4,370,993 – 4,371,083	-	6	95	93.29	-2.21	0.98	0.999855
1078	2R_DroMel_CAF1	4,372,058 – 4,372,191	- - - - - - - - -	1900	4,372,058 – 4,372,163	+	5	105	89.94	-2.04	0.85	0.982421
				1901	4,372,058 – 4,372,163	-	5	105	89.94	-1.52	0.84	0.777698
				1902	4,372,083 – 4,372,191	+	5	108	96.02	-1.80	0.92	0.990721
				1903	4,372,083 – 4,372,191	-	5	108	96.02	-1.62	0.91	0.969976
1079	2R_DroMel_CAF1	4,372,300 – 4,372,460	- - - - - - - - -	1904	4,372,300 – 4,372,396	-	5	96	94.79	-1.20	0.88	0.587512
				1905	4,372,317 – 4,372,420	-	5	103	92.91	-1.36	0.86	0.734850
				1906	4,372,356 – 4,372,460	-	5	104	94.13	-1.41	0.88	0.840588
1080	2R_DroMel_CAF1	4,372,806 – 4,373,062	- - - - - - - - -	1907	4,372,806 – 4,372,906	-	5	115	86.78	-1.78	0.68	0.527845
				1908	4,372,906 – 4,373,026	+	5	120	88.00	-1.38	0.82	0.516618
				1909	4,372,946 – 4,373,062	+	5	120	91.84	-1.61	0.87	0.932093
1081	2R_DroMel_CAF1	4,373,846 – 4,373,978	- - - - - - - - -	1910	4,373,846 – 4,373,944	-	3	99	78.17	-2.20	0.88	0.996814
				1911	4,373,873 – 4,373,978	+	3	106	79.22	-1.55	0.76	0.742269
				1912	4,373,873 – 4,373,978	-	3	106	79.22	-1.89	0.77	0.932346
1082	2R_DroMel_CAF1	4,375,358 – 4,375,452	- - - - - - - - -	1913	4,375,358 – 4,375,452	+	5	94	97.66	-1.59	1.00	0.984490
1082	2R_DroMel_CAF1	4,375,358 – 4,375,452	- - - - - - - - -	1914	4,375,358 – 4,375,452	-	5	94	97.66	-1.91	0.87	0.944889
1083	2R_DroMel_CAF1	4,375,782 – 4,375,919	- - - - - - - - -	1915	4,375,782 – 4,375,883	-	5	101	93.96	-1.57	0.81	0.698613
				1916	4,375,822 – 4,375,919	+	5	97	90.47	-1.53	0.87	0.864094
				1917	4,375,822 – 4,375,919	-	5	97	90.47	-2.08	0.88	0.993540
1084	2R_DroMel_CAF1	4,376,420 – 4,376,539	- - - - - - - - -	1918	4,376,420 – 4,376,539	+	5	120	97.33	-1.13	0.96	0.575301
1085	2R_DroMel_CAF1	4,378,297 – 4,378,433	- - - - - - - - -	1919	4,378,297 – 4,378,397	+	6	109	76.75	-2.28	0.43	0.798406
1085	2R_DroMel_CAF1	4,378,297 – 4,378,433	- - - - - - - - -	1920	4,378,323 – 4,378,433	+	6	120	77.16	-1.69	0.57	0.706753
1086	2R_DroMel_CAF1	4,378,822 – 4,378,929	- - - "knownCDS=Parent=FBtr0088639, FBtr0088640;Name=Rya-r44F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10844-RD, FlyBase+Annotation+IDs:CG10844-RA" - - - - -	1921	4,378,822 – 4,378,929	-	6	108	82.59	-1.32	0.74	0.500000
1087	2R_DroMel_CAF1	4,380,241 – 4,380,401	- - - "knownCDS=Parent=FBtr0088639, FBtr0088640;Name=Rya-r44F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10844-RD, FlyBase+Annotation+IDs:CG10844-RA" - - - - -	1922	4,380,241 – 4,380,361	+	6	120	85.50	-1.76	0.78	0.500000
				1923	4,380,281 – 4,380,401	+	6	120	84.72	-1.67	0.82	0.622340
				1924	4,380,281 – 4,380,401	-	6	120	84.72	-1.64	0.77	0.500000
1088	2R_DroMel_CAF1	4,381,646 – 4,381,752	- - - "knownCDS=Parent=FBtr0088637, FBtr0088638;Name=Rya-r44F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10844-RC, FlyBase+Annotation+IDs:CG10844-RB" - - - - -	1925	4,381,646 – 4,381,752	+	6	116	80.47	-1.81	0.76	0.860416
1088	2R_DroMel_CAF1	4,381,646 – 4,381,752		1926	4,381,646 – 4,381,752	-	6	116	80.47	-1.49	0.63	0.547127
1089	2R_DroMel_CAF1	4,386,800 – 4,386,917	- - - - - - - - -	1927	4,386,800 – 4,386,917	+	5	120	88.33	-2.40	0.77	0.959650
1090	2R_DroMel_CAF1	4,393,712 – 4,393,830	- - - - - - - - -	1928	4,393,712 – 4,393,830	+	6	118	82.85	-1.74	0.65	0.516441
1090	2R_DroMel_CAF1	4,393,712 – 4,393,830	- - - - - - - - -	1929	4,393,712 – 4,393,830	-	6	118	82.85	-2.59	0.55	0.565209
1091	2R_DroMel_CAF1	4,394,116 – 4,394,263	- - - "knownCDS=Parent=FBtr0088637, FBtr0088638;Name=Rya-r44F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10844-RC, FlyBase+Annotation+IDs:CG10844-RB" - - - - -	1930	4,394,116 – 4,394,236	+	6	120	93.11	-1.56	0.86	0.689147
1091	2R_DroMel_CAF1	4,394,116 – 4,394,263		1931	4,394,156 – 4,394,263	+	6	110	79.45	-2.16	0.89	0.953633
1092	2R_DroMel_CAF1	4,395,399 – 4,395,615	- - - "knownCDS=Parent=FBtr0088637, FBtr0088638;Name=Rya-r44F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10844-RC, FlyBase+Annotation+IDs:CG10844-RB" - - - - -	1932	4,395,399 – 4,395,495	+	6	98	79.93	-2.11	0.74	0.922676
				1933	4,395,399 – 4,395,495	-	6	98	79.93	-1.48	0.66	0.661494
				1934	4,395,421 – 4,395,535	-	6	120	84.33	-1.83	0.76	0.590317
				1935	4,395,455 – 4,395,575	-	6	120	92.61	-2.67	0.79	0.657419
				1936	4,395,495 – 4,395,615	+	6	120	92.78	-2.45	0.80	0.679126
				1937	4,395,495 – 4,395,615	-	6	120	92.78	-4.06	0.90	0.999826
1093	2R_DroMel_CAF1	4,400,005 – 4,400,125	- - - - - - - - -	1938	4,400,005 – 4,400,125	+	4	120	81.45	-2.03	0.72	0.897950
1094	2R_DroMel_CAF1	4,401,649 – 4,401,767	- - - "knownCDS=Parent=FBtr0088686;Name=CG8272-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8272-RA" - - - - -	1939	4,401,649 – 4,401,767	-	6	118	79.60	-1.03	0.74	0.529045
1095	2R_DroMel_CAF1	4,405,972 – 4,406,066	- - - - - - - - -	1940	4,405,972 – 4,406,066	+	6	99	79.22	-2.69	0.62	0.965162
1096	2R_DroMel_CAF1	4,407,007 – 4,407,108	- - - - - - - - -	1941	4,407,007 – 4,407,108	-	6	105	81.89	-1.92	0.67	0.708589
1097	2R_DroMel_CAF1	4,407,597 – 4,407,697	- - - - - - - - -	1942	4,407,597 – 4,407,697	+	6	104	81.83	-1.46	0.65	0.500000
1098	2R_DroMel_CAF1	4,408,899 – 4,409,009	- - - "knownCDS=Parent=FBtr0088642, FBtr0088643;Name=sec31-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8266-RA, FlyBase+Annotation+IDs:CG8266-RB" - - - - -	1943	4,408,899 – 4,409,009	-	6	110	83.83	-1.98	0.76	0.684900
1099	2R_DroMel_CAF1	4,410,873 – 4,410,963	- - - "knownCDS=Parent=FBtr0088685;Name=CG8262-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8262-RA" - - - - -	1944	4,410,873 – 4,410,963	+	6	90	88.96	-1.86	0.86	0.784911
1100	2R_DroMel_CAF1	4,414,260 – 4,414,402	- - - "knownCDS=Parent=FBtr0088649;Name=Ggamma1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8261-RE" - - - - -	1945	4,414,260 – 4,414,380	+	6	120	83.50	-2.83	0.68	0.775416
				1946	4,414,260 – 4,414,380	-	6	120	83.50	-3.06	0.66	0.793253
				1947	4,414,300 – 4,414,402	+	6	103	72.14	-2.60	0.44	0.993078
				1948	4,414,300 – 4,414,402	-	6	103	72.14	-1.70	0.56	0.878669
1101	2R_DroMel_CAF1	4,420,221 – 4,420,358	- - - - - - - - -	1949	4,420,221 – 4,420,326	+	6	105	78.16	-1.16	0.67	0.556839
1101	2R_DroMel_CAF1	4,420,221 – 4,420,358	- - - - - - - - -	1950	4,420,261 – 4,420,358	-	6	105	70.44	-1.58	0.47	0.554696
1102	2R_DroMel_CAF1	4,421,079 – 4,421,195	- - - "knownCDS=Parent=FBtr0088650;Name=CG30349-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30349-RA" - - - - -	1951	4,421,079 – 4,421,195	+	6	116	78.10	-1.77	0.58	0.750506
1103	2R_DroMel_CAF1	4,421,827 – 4,421,919	- - - "knownCDS=Parent=FBtr0088682;Name=CG8252-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8252-RA" - - - - -	1952	4,421,827 – 4,421,919	+	6	93	78.63	-1.40	0.64	0.617365
1104	2R_DroMel_CAF1	4,423,289 – 4,423,409	- - - "knownCDS=Parent=FBtr0088679, FBtr0088680, FBtr0088681;Name=Pgi-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8251-RA, FlyBase+Annotation+IDs:CG8251-RB, FlyBase+Annotation+IDs:CG8251-RC" - - - - -	1953	4,423,289 – 4,423,409	-	6	120	79.67	-1.90	0.55	0.618195
1105	2R_DroMel_CAF1	4,424,342 – 4,424,461	- - - - - - - - -	1954	4,424,342 – 4,424,461	+	5	119	93.36	-1.89	0.89	0.991703
1105	2R_DroMel_CAF1	4,424,342 – 4,424,461	- - - - - - - - -	1955	4,424,342 – 4,424,461	-	5	119	93.36	-1.63	0.97	0.993354
1106	2R_DroMel_CAF1	4,427,164 – 4,427,263	- - - "knownCDS=Parent=FBtr0088651;Name=lin-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11770-RA" - - - - -	1956	4,427,164 – 4,427,263	+	6	120	71.77	-1.97	0.45	0.881811
1107	2R_DroMel_CAF1	4,435,721 – 4,435,817	- - - "knownCDS=Parent=FBtr0088652;Name=CG8243-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8243-RA" - - - - -	1957	4,435,721 – 4,435,817	+	5	120	69.61	-1.78	0.40	0.683638
1108	2R_DroMel_CAF1	4,436,208 – 4,436,304	- - - "knownCDS=Parent=FBtr0088652;Name=CG8243-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8243-RA" - - - - -	1958	4,436,208 – 4,436,304	+	5	120	74.91	-1.82	0.50	0.712761
1108	2R_DroMel_CAF1	4,436,208 – 4,436,304		1959	4,436,208 – 4,436,304	-	5	120	74.91	-1.72	0.32	0.543998
1109	2R_DroMel_CAF1	4,436,902 – 4,437,006	- - - - - - - - -	1960	4,436,902 – 4,437,006	-	5	120	72.70	-1.79	0.46	0.704647
1110	2R_DroMel_CAF1	4,439,517 – 4,439,620	- - - "knownCDS=Parent=FBtr0088676;Name=CG8235-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8235-RA" - - - - -	1961	4,439,517 – 4,439,620	+	6	105	77.56	-2.50	0.52	0.954667
1111	2R_DroMel_CAF1	4,442,220 – 4,442,319	- - - "knownCDS=Parent=FBtr0088654;Name=CG8232-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8232-RA" - - - - -	1962	4,442,220 – 4,442,319	+	6	118	73.23	-1.63	0.68	0.954311
1111	2R_DroMel_CAF1	4,442,220 – 4,442,319		1963	4,442,220 – 4,442,319	-	6	118	73.23	-2.08	0.69	0.988555
1112	2R_DroMel_CAF1	4,443,957 – 4,444,067	- - - "knownCDS=Parent=FBtr0088654;Name=CG8232-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8232-RA" - - - - -	1964	4,443,957 – 4,444,067	+	6	118	78.81	-1.33	0.71	0.733100
1113	2R_DroMel_CAF1	4,449,341 – 4,449,442	- - - "knownCDS=Parent=FBtr0088675;Name=CG13745-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13745-RA" - - - - -	1965	4,449,341 – 4,449,442	-	6	105	78.98	-1.43	0.61	0.533963
1114	2R_DroMel_CAF1	4,452,658 – 4,452,779	- - - - - - - - -	1966	4,452,658 – 4,452,751	+	6	109	77.15	-1.42	0.65	0.729621
1114	2R_DroMel_CAF1	4,452,658 – 4,452,779	- - - - - - - - -	1967	4,452,683 – 4,452,779	+	6	108	78.20	-1.59	0.73	0.891274
1115	2R_DroMel_CAF1	4,455,557 – 4,455,648	- - - - - - - - -	1968	4,455,557 – 4,455,648	+	6	96	83.57	-1.50	0.79	0.544128
1116	2R_DroMel_CAF1	4,459,088 – 4,459,282	- - - - - - - - -	1969	4,459,088 – 4,459,182	+	5	95	93.86	-2.00	0.81	0.943562
				1970	4,459,104 – 4,459,222	+	5	118	93.03	-1.52	0.80	0.671844
				1971	4,459,182 – 4,459,282	+	4	115	80.76	-1.67	0.64	0.551373
1117	2R_DroMel_CAF1	4,465,950 – 4,466,110	- - - - - - - - -	1972	4,465,950 – 4,466,070	-	6	120	83.90	-1.54	0.81	0.576144
1117	2R_DroMel_CAF1	4,465,950 – 4,466,110	- - - - - - - - -	1973	4,465,990 – 4,466,110	-	6	120	84.98	-2.55	0.83	0.911449
1118	2R_DroMel_CAF1	4,484,264 – 4,484,375	- - - "knownCDS=Parent=FBtr0088670;Name=CG8213-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8213-RA" - - - - -	1974	4,484,264 – 4,484,375	+	6	120	73.84	-1.98	0.39	0.616742
1119	2R_DroMel_CAF1	4,485,844 – 4,485,958	- - - "knownCDS=Parent=FBtr0088670;Name=CG8213-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8213-RA" - - - - -	1975	4,485,844 – 4,485,958	+	6	117	79.19	-1.33	0.64	0.522484
1120	2R_DroMel_CAF1	4,488,986 – 4,489,088	- - - - - - - - -	1976	4,488,986 – 4,489,088	-	6	105	81.89	-2.00	0.67	0.733877
1121	2R_DroMel_CAF1	4,496,489 – 4,496,579	- - - - - - - - -	1977	4,496,489 – 4,496,579	+	5	90	87.96	-1.85	0.74	0.721699
1121	2R_DroMel_CAF1	4,496,489 – 4,496,579	- - - - - - - - -	1978	4,496,489 – 4,496,579	-	5	90	87.96	-3.35	0.79	0.997718
1122	2R_DroMel_CAF1	4,498,491 – 4,498,581	- - - - - - - - -	1979	4,498,491 – 4,498,581	+	5	98	83.32	-2.09	0.68	0.826272
1123	2R_DroMel_CAF1	4,506,484 – 4,506,583	- - - - - - - - -	1980	4,506,484 – 4,506,583	+	4	99	91.42	-1.65	0.82	0.685726
1123	2R_DroMel_CAF1	4,506,484 – 4,506,583	- - - - - - - - -	1981	4,506,484 – 4,506,583	-	4	99	91.42	-1.88	0.82	0.824739
1124	2R_DroMel_CAF1	4,507,195 – 4,507,286	- - - - - - - - -	1982	4,507,195 – 4,507,286	+	6	102	78.07	-2.02	0.67	0.939424
1124	2R_DroMel_CAF1	4,507,195 – 4,507,286	- - - - - - - - -	1983	4,507,195 – 4,507,286	-	6	102	78.07	-1.72	0.72	0.915657
1125	2R_DroMel_CAF1	4,508,626 – 4,508,719	- - - "knownCDS=Parent=FBtr0088668;Name=CG8181-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8181-RA" - - - - -	1984	4,508,626 – 4,508,719	-	6	102	75.07	-2.17	0.47	0.905961
1126	2R_DroMel_CAF1	4,509,144 – 4,509,266	- - - "knownCDS=Parent=FBtr0088668;Name=CG8181-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8181-RA" - - - - -	1985	4,509,144 – 4,509,235	+	6	91	78.90	-1.94	0.71	0.926638
1126	2R_DroMel_CAF1	4,509,144 – 4,509,266		1986	4,509,171 – 4,509,266	+	6	99	76.45	-2.33	0.57	0.969921
1127	2R_DroMel_CAF1	4,516,207 – 4,516,358	- - - - - - - - -	1987	4,516,207 – 4,516,298	+	3	92	92.39	-1.48	0.93	0.525707
				1988	4,516,207 – 4,516,298	-	3	92	92.39	-2.23	0.90	0.869051
				1989	4,516,268 – 4,516,358	+	3	91	92.31	-2.00	0.81	0.500000
				1990	4,516,268 – 4,516,358	-	3	91	92.31	-2.06	0.86	0.699483
1128	2R_DroMel_CAF1	4,517,940 – 4,518,060	- - - - - - - - -	1991	4,517,940 – 4,518,031	+	5	91	91.43	-1.49	0.82	0.739160
1128	2R_DroMel_CAF1	4,517,940 – 4,518,060	- - - - - - - - -	1992	4,517,961 – 4,518,060	+	5	110	84.72	-1.78	0.71	0.659913
1129	2R_DroMel_CAF1	4,522,258 – 4,522,356	- - - - - - - - -	1993	4,522,258 – 4,522,356	+	3	98	85.27	-2.82	0.57	0.500000
1130	2R_DroMel_CAF1	4,523,053 – 4,523,213	- - - "knownCDS=Parent=FBtr0088667;Name=CG8172-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8172-RA" - - - - -	1994	4,523,053 – 4,523,173	-	6	120	86.67	-2.12	0.77	0.513175
1130	2R_DroMel_CAF1	4,523,053 – 4,523,213		1995	4,523,093 – 4,523,213	-	6	120	91.28	-1.74	0.83	0.555049
1131	2R_DroMel_CAF1	4,523,372 – 4,523,480	- - - - - - - - -	1996	4,523,372 – 4,523,480	+	6	108	73.71	-2.23	0.56	0.981630
1132	2R_DroMel_CAF1	4,530,057 – 4,530,166	- - - "knownCDS=Parent=FBtr0088660;Name=CG13747-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13747-RA" - - - - -	1997	4,530,057 – 4,530,166	-	6	111	80.58	-1.93	0.55	0.544911
1133	2R_DroMel_CAF1	4,532,533 – 4,532,623	- - - - - - - - -	1998	4,532,533 – 4,532,623	+	6	109	81.44	-1.52	0.81	0.728421
1134	2R_DroMel_CAF1	4,533,133 – 4,533,253	- - - - - - - - -	1999	4,533,133 – 4,533,253	-	6	120	84.44	-1.70	0.75	0.505004
1135	2R_DroMel_CAF1	4,534,399 – 4,534,513	- - - "knownCDS=Parent=FBtr0088665;Name=CG8170-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8170-RA" - - - - -	2000	4,534,399 – 4,534,513	+	6	114	75.28	-1.65	0.51	0.517474
1136	2R_DroMel_CAF1	4,534,991 – 4,535,081	- - - "knownCDS=Parent=FBtr0088665;Name=CG8170-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8170-RA" - - - - -	2001	4,534,991 – 4,535,081	-	6	102	76.16	-1.64	0.58	0.754805
1137	2R_DroMel_CAF1	4,538,099 – 4,538,209	- - - - - - - - -	2002	4,538,099 – 4,538,209	+	5	110	92.69	-2.45	0.75	0.904413
1138	2R_DroMel_CAF1	4,538,803 – 4,538,897	- - - - - - - - -	2003	4,538,803 – 4,538,897	-	5	95	93.33	-2.08	0.90	0.997723
1139	2R_DroMel_CAF1	4,540,570 – 4,540,673	- - - - - - - - -	2004	4,540,570 – 4,540,673	+	6	110	75.95	-1.57	0.59	0.716924
1139	2R_DroMel_CAF1	4,540,570 – 4,540,673	- - - - - - - - -	2005	4,540,570 – 4,540,673	-	6	110	75.95	-1.82	0.62	0.923428
1140	2R_DroMel_CAF1	4,541,530 – 4,541,620	- - - - - - - - -	2006	4,541,530 – 4,541,620	-	5	90	89.22	-1.87	0.73	0.671911
1141	2R_DroMel_CAF1	4,550,311 – 4,550,418	- - - - - - - - -	2007	4,550,311 – 4,550,418	+	5	115	92.49	-1.36	0.91	0.861112
1142	2R_DroMel_CAF1	4,558,485 – 4,558,745	- - - - - - - - -	2008	4,558,485 – 4,558,602	-	6	119	72.12	-1.18	0.67	0.780654
				2009	4,558,525 – 4,558,641	-	5	116	79.75	-1.83	0.80	0.901974
				2010	4,558,602 – 4,558,705	-	4	103	83.69	-1.78	0.93	0.916967
				2011	4,558,641 – 4,558,745	-	6	115	79.39	-2.76	0.45	0.867021
1143	2R_DroMel_CAF1	4,558,993 – 4,559,083	- - - - - - - - -	2012	4,558,993 – 4,559,083	+	5	112	80.28	-1.88	0.57	0.612593
1144	2R_DroMel_CAF1	4,560,785 – 4,560,877	- - - - - - - - -	2013	4,560,785 – 4,560,877	+	6	101	83.86	-2.05	0.75	0.670744
1145	2R_DroMel_CAF1	4,562,634 – 4,562,729	- - - "knownCDS=Parent=FBtr0088662;Name=CG13743-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13743-RA" - - - - -	2014	4,562,634 – 4,562,729	-	6	105	78.95	-1.90	0.56	0.714517
1146	2R_DroMel_CAF1	4,567,215 – 4,567,315	- - - - - - - - -	2015	4,567,215 – 4,567,315	-	6	116	67.56	-2.03	0.31	0.779091
1147	2R_DroMel_CAF1	4,571,667 – 4,571,782	- - - - - - - - -	2016	4,571,667 – 4,571,763	-	6	109	83.92	-2.06	0.73	0.644466
1147	2R_DroMel_CAF1	4,571,667 – 4,571,782	- - - - - - - - -	2017	4,571,687 – 4,571,782	+	6	99	87.06	-2.19	0.76	0.500000
1148	2R_DroMel_CAF1	4,576,326 – 4,576,453	- - - - - - - - -	2018	4,576,326 – 4,576,423	+	4	97	94.16	-2.42	0.83	0.893155
				2019	4,576,363 – 4,576,453	+	5	96	87.37	-1.66	0.85	0.821808
				2020	4,576,363 – 4,576,453	-	5	96	87.37	-1.74	0.85	0.875929
1149	2R_DroMel_CAF1	4,582,629 – 4,582,739	- - - - - - - - -	2021	4,582,629 – 4,582,739	-	5	118	94.88	-1.45	0.91	0.931601
1150	2R_DroMel_CAF1	4,585,027 – 4,585,125	- - - - - - - - -	2022	4,585,027 – 4,585,125	-	5	106	87.18	-1.44	0.80	0.520778
1151	2R_DroMel_CAF1	4,593,377 – 4,593,486	- - - "knownCDS=Parent=FBtr0088560, FBtr0088561, FBtr0088562;Name=CG8083-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8083-RA, FlyBase+Annotation+IDs:CG8083-RB, FlyBase+Annotation+IDs:CG8083-RC" - - - - -	2023	4,593,377 – 4,593,486	+	6	114	79.28	-1.81	0.62	0.778060
1152	2R_DroMel_CAF1	4,593,749 – 4,593,849	- - - "knownCDS=Parent=FBtr0088560, FBtr0088561, FBtr0088562;Name=CG8083-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8083-RA, FlyBase+Annotation+IDs:CG8083-RB, FlyBase+Annotation+IDs:CG8083-RC" - - - - -	2024	4,593,749 – 4,593,849	-	6	104	76.53	-1.59	0.66	0.874279
1153	2R_DroMel_CAF1	4,599,222 – 4,599,342	- - - "knownCDS=Parent=FBtr0088634;Name=CG13742-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13742-RA" - - - - -	2025	4,599,222 – 4,599,342	+	6	120	80.89	-2.31	0.58	0.792656
1154	2R_DroMel_CAF1	4,603,034 – 4,603,130	- - - - - - - - -	2026	4,603,034 – 4,603,130	-	5	120	73.05	-1.79	0.41	0.661181
1155	2R_DroMel_CAF1	4,607,152 – 4,607,352	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002401; Name=psi28S-2949;Dbxref=FB:FBgn0082981, GB:AJ831220" - - - - - - - -	2027	4,607,152 – 4,607,251	-	6	102	81.73	-2.27	0.70	0.842611
				2028	4,607,179 – 4,607,288	+	6	116	79.58	-2.01	0.62	0.848611
				2029	4,607,179 – 4,607,288	-	6	116	79.58	-3.34	0.46	0.965637
				2030	4,607,251 – 4,607,352	+	6	106	83.25	-2.83	0.71	0.834847
1156	2R_DroMel_CAF1	4,607,488 – 4,607,590	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002402; Name=DmOr_aca5;Alias=snoRNA:227;Dbxref=FB:FBgn0065074, GB:AJ809558,FB:FBgn0082921,GB:NR_002540" - - - - - - - "Flybase=FBgn0082921:snoRNA:Or-aca5:nuclear_small_nucleolar_RNA_gene\|3e-49"	2031	4,607,488 – 4,607,590	+	6	115	80.90	-2.57	0.85	0.955626
1157	2R_DroMel_CAF1	4,608,869 – 4,608,988	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002407; Name=DmOr_cd2;Alias=snoRNA:461;Dbxref=FB:FBgn0065065, GB:AY805215,FB:FBgn0082920,GB:NR_002541" - - - - - - - "Flybase=FBgn0082920:snoRNA:Or-cd2:nuclear_small_nucleolar_RNA_gene\|4e-61"	2032	4,608,869 – 4,608,988	+	6	120	83.07	-1.78	0.79	0.711082
1158	2R_DroMel_CAF1	4,609,178 – 4,609,298	- - - "knownCDS=Parent=FBtr0088631;Name=CG8078-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8078-RA" - - - - -	2033	4,609,178 – 4,609,298	-	6	120	80.94	-1.77	0.61	0.613844
1159	2R_DroMel_CAF1	4,613,329 – 4,613,449	- - - "knownCDS=Parent=FBtr0088565;Name=CG8777-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8777-RA" - - - - -	2034	4,613,329 – 4,613,449	+	6	120	76.89	-1.78	0.59	0.823492
1159	2R_DroMel_CAF1	4,613,329 – 4,613,449		2035	4,613,329 – 4,613,449	-	6	120	76.89	-2.07	0.45	0.635497
1160	2R_DroMel_CAF1	4,617,847 – 4,617,948	- - - - - - - - -	2036	4,617,847 – 4,617,948	+	6	106	70.31	-1.87	0.52	0.930154
1161	2R_DroMel_CAF1	4,621,270 – 4,621,363	- - - - - - - - -	2037	4,621,270 – 4,621,363	+	4	93	92.25	-1.59	0.82	0.622403
1162	2R_DroMel_CAF1	4,625,496 – 4,625,716	- - - "knownCDS=Parent=FBtr0088628;Name=Mys45A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8070-RA" - - - - -	2038	4,625,496 – 4,625,616	-	6	120	79.56	-1.55	0.59	0.520391
1162	2R_DroMel_CAF1	4,625,496 – 4,625,716		2039	4,625,616 – 4,625,716	-	6	108	79.50	-1.05	0.86	0.589342
1163	2R_DroMel_CAF1	4,627,517 – 4,627,621	- - - "knownCDS=Parent=FBtr0088569;Name=Phax-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8069-RB" - - - - -	2040	4,627,517 – 4,627,621	-	6	116	72.57	-1.26	0.61	0.602562
1164	2R_DroMel_CAF1	4,628,679 – 4,628,814	- - - - - - - - -	2041	4,628,679 – 4,628,775	-	4	96	88.37	-1.82	0.73	0.711640
1164	2R_DroMel_CAF1	4,628,679 – 4,628,814	- - - - - - - - -	2042	4,628,719 – 4,628,814	+	4	96	85.34	-2.04	0.72	0.852667
1165	2R_DroMel_CAF1	4,628,829 – 4,628,922	- - - - - - - - -	2043	4,628,829 – 4,628,922	+	5	97	80.76	-2.15	0.52	0.725301
1166	2R_DroMel_CAF1	4,630,290 – 4,630,382	- - - - - - - - -	2044	4,630,290 – 4,630,382	+	6	96	77.94	-1.75	0.63	0.853618
1167	2R_DroMel_CAF1	4,630,756 – 4,630,852	- - - "knownCDS=Parent=FBtr0088571, FBtr0088574;Name=Su(var)2-10-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8068-RH, FlyBase+Annotation+IDs:CG8068-RF" - - - - -	2045	4,630,756 – 4,630,852	+	6	105	76.75	-1.65	0.53	0.500000
1168	2R_DroMel_CAF1	4,632,222 – 4,632,325	- - - "knownCDS=Parent=FBtr0088570;Name=Su(var)2-10-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8068-RI" - - - - -	2046	4,632,222 – 4,632,325	+	6	109	81.55	-2.00	0.63	0.696953
1169	2R_DroMel_CAF1	4,633,655 – 4,633,751	- - - - - - - - -	2047	4,633,655 – 4,633,751	-	4	106	85.35	-1.55	0.86	0.688321
1170	2R_DroMel_CAF1	4,640,536 – 4,640,660	- - - - - - - - -	2048	4,640,536 – 4,640,628	+	3	92	88.41	-3.04	0.88	0.973345
				2049	4,640,536 – 4,640,628	-	3	92	88.41	-2.77	0.85	0.938765
				2050	4,640,552 – 4,640,660	+	3	115	85.42	-2.32	0.91	0.968096
				2051	4,640,552 – 4,640,660	-	3	115	85.42	-2.15	0.86	0.894021
1171	2R_DroMel_CAF1	4,645,908 – 4,646,027	- - - "knownCDS=Parent=FBtr0088580;Name=CG8058-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8058-RA" - - - - -	2052	4,645,908 – 4,646,027	+	6	120	81.51	-1.60	0.64	0.543890
1172	2R_DroMel_CAF1	4,649,722 – 4,649,849	- - - - - - - - -	2053	4,649,722 – 4,649,820	+	5	99	89.84	-1.39	0.81	0.575850
				2054	4,649,746 – 4,649,849	+	5	103	92.42	-1.44	0.94	0.949153
				2055	4,649,746 – 4,649,849	-	5	103	92.42	-2.33	0.90	0.999366
1173	2R_DroMel_CAF1	4,651,305 – 4,651,445	- - - - - - - - -	2056	4,651,305 – 4,651,409	+	4	117	84.01	-2.69	0.56	0.761439
1173	2R_DroMel_CAF1	4,651,305 – 4,651,445	- - - - - - - - -	2057	4,651,345 – 4,651,445	-	4	113	81.06	-2.54	0.54	0.830156
1174	2R_DroMel_CAF1	4,652,963 – 4,653,075	- - - - - - - - -	2058	4,652,963 – 4,653,075	-	6	120	82.56	-1.74	0.74	0.682273
1175	2R_DroMel_CAF1	4,671,438 – 4,671,540	- - - "knownCDS=Parent=FBtr0088622;Name=CG8008-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8008-RA" - - - - -	2059	4,671,438 – 4,671,540	-	6	102	89.08	-1.92	0.81	0.524328
1176	2R_DroMel_CAF1	4,682,258 – 4,682,378	- - - "knownCDS=Parent=FBtr0088618;Name=Rme-8-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8014-RA" - - - - -	2060	4,682,258 – 4,682,378	-	6	120	80.33	-1.59	0.64	0.648197
1177	2R_DroMel_CAF1	4,682,700 – 4,682,878	- - - "knownCDS=Parent=FBtr0088618;Name=Rme-8-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8014-RA" - - - - -	2061	4,682,700 – 4,682,799	+	6	99	82.12	-1.42	0.68	0.516833
1177	2R_DroMel_CAF1	4,682,700 – 4,682,878		2062	4,682,759 – 4,682,878	-	6	119	80.06	-1.94	0.59	0.729088
1178	2R_DroMel_CAF1	4,684,146 – 4,684,254	- - - "knownCDS=Parent=FBtr0088618;Name=Rme-8-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8014-RA" - - - - -	2063	4,684,146 – 4,684,254	-	6	114	80.74	-1.77	0.73	0.818768
1179	2R_DroMel_CAF1	4,686,115 – 4,686,235	- - - "knownCDS=Parent=FBtr0088618;Name=Rme-8-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8014-RA" - - - - -	2064	4,686,115 – 4,686,235	-	6	120	80.28	-1.21	0.75	0.622125
1180	2R_DroMel_CAF1	4,692,633 – 4,692,723	- - - "knownCDS=Parent=FBtr0089930;Name=ltd-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8024-RA" - - - - -	2065	4,692,633 – 4,692,723	-	6	108	82.22	-1.51	0.67	0.517199
1181	2R_DroMel_CAF1	4,699,799 – 4,699,893	- - - "knownCDS=Parent=FBtr0088611;Name=CG8026-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8026-RB" - - - - -	2066	4,699,799 – 4,699,893	+	6	108	77.30	-1.72	0.77	0.945747
1182	2R_DroMel_CAF1	4,704,666 – 4,704,826	- - - - - - - - -	2067	4,704,666 – 4,704,786	+	5	120	96.22	-1.69	0.93	0.984035
1182	2R_DroMel_CAF1	4,704,666 – 4,704,826	- - - - - - - - -	2068	4,704,706 – 4,704,826	+	5	120	99.67	-1.65	1.00	0.951828
1183	2R_DroMel_CAF1	4,705,022 – 4,705,133	- - - - - - - - -	2069	4,705,022 – 4,705,133	-	5	120	92.67	-2.16	0.85	0.992549
1184	2R_DroMel_CAF1	4,705,777 – 4,705,931	- - - - - - - - -	2070	4,705,777 – 4,705,891	+	5	120	94.33	-1.77	0.85	0.955053
				2071	4,705,817 – 4,705,931	+	5	120	92.10	-2.23	0.79	0.956562
				2072	4,705,817 – 4,705,931	-	5	120	92.10	-1.61	0.85	0.912573
1185	2R_DroMel_CAF1	4,706,473 – 4,706,593	- - - - - - - - -	2073	4,706,473 – 4,706,593	-	3	120	92.50	-1.39	0.98	0.637408
1186	2R_DroMel_CAF1	4,711,839 – 4,711,943	- - - - - - - - -	2074	4,711,839 – 4,711,943	-	6	104	90.37	-2.51	0.83	0.880346
1187	2R_DroMel_CAF1	4,713,569 – 4,713,660	- - - - - - - - -	2075	4,713,569 – 4,713,660	-	6	99	83.38	-2.40	0.77	0.828860
1188	2R_DroMel_CAF1	4,713,871 – 4,714,021	- - "RNAmicro=f:4713908_t:4714020_strand:+_p:0.877093" - - - - - -	2076	4,713,871 – 4,713,988	+	3	120	76.45	-1.11	0.82	0.733181
1188	2R_DroMel_CAF1	4,713,871 – 4,714,021		2077	4,713,908 – 4,714,021	+	3	113	82.74	-1.54	0.98	0.989954
1189	2R_DroMel_CAF1	4,714,206 – 4,714,308	- - - - - - - - -	2078	4,714,206 – 4,714,308	+	5	102	87.70	-1.35	0.92	0.627429
1190	2R_DroMel_CAF1	4,718,690 – 4,718,786	- - - - - - - - -	2079	4,718,690 – 4,718,786	-	6	108	71.04	-2.40	0.55	0.993571
1191	2R_DroMel_CAF1	4,718,867 – 4,718,965	- - - - - - - - -	2080	4,718,867 – 4,718,965	+	5	98	84.39	-1.79	0.72	0.677423
1192	2R_DroMel_CAF1	4,719,877 – 4,719,985	- - - "knownCDS=Parent=FBtr0088587, FBtr0088588;Name=CG8029-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8029-RB, FlyBase+Annotation+IDs:CG8029-RA" - - - - -	2081	4,719,877 – 4,719,985	+	6	110	76.58	-1.89	0.60	0.909508
1193	2R_DroMel_CAF1	4,727,227 – 4,727,335	- - - - - - - - -	2082	4,727,227 – 4,727,335	-	5	111	81.19	-1.64	0.63	0.500000
1194	2R_DroMel_CAF1	4,732,472 – 4,732,562	- - - - - - - - -	2083	4,732,472 – 4,732,562	+	6	108	70.83	-2.01	0.55	0.971814
1195	2R_DroMel_CAF1	4,734,282 – 4,734,402	- - - - - - - - -	2084	4,734,282 – 4,734,402	-	5	120	91.73	-1.96	0.72	0.553033
1196	2R_DroMel_CAF1	4,736,239 – 4,736,335	- - - - - - - - -	2085	4,736,239 – 4,736,335	+	6	97	80.71	-3.11	0.39	0.734347
1197	2R_DroMel_CAF1	4,741,158 – 4,741,261	- - - - - - - - -	2086	4,741,158 – 4,741,261	-	5	103	72.61	-2.12	0.69	0.993819
1198	2R_DroMel_CAF1	4,743,372 – 4,743,462	- - - - - - - - -	2087	4,743,372 – 4,743,462	+	5	91	98.90	-2.14	0.96	0.996697
1199	2R_DroMel_CAF1	4,746,221 – 4,746,319	- - - - - - - - -	2088	4,746,221 – 4,746,319	-	6	120	80.62	-1.25	0.70	0.559669
1200	2R_DroMel_CAF1	4,747,549 – 4,747,653	- - - - - - - - -	2089	4,747,549 – 4,747,653	+	4	104	81.25	-1.61	0.68	0.561687
1201	2R_DroMel_CAF1	4,758,383 – 4,758,474	- - - - - - - - -	2090	4,758,383 – 4,758,474	-	5	98	87.07	-1.59	0.73	0.540709
1202	2R_DroMel_CAF1	4,758,805 – 4,758,902	- - - - - - - - -	2091	4,758,805 – 4,758,902	+	6	98	81.50	-2.72	0.46	0.594410
1203	2R_DroMel_CAF1	4,774,178 – 4,774,271	- - - "knownCDS=texon10512;Parent=CG_RGUI_GID_mRNA_40002734, CG_DGIL_SNO_28355197, CG_BATZ_CON_47003191" - - - - -	2092	4,774,178 – 4,774,271	-	6	98	80.35	-1.59	0.66	0.679917
1204	2R_DroMel_CAF1	4,783,157 – 4,783,253	- - - - - - - - -	2093	4,783,157 – 4,783,253	+	6	100	81.05	-1.64	0.75	0.774025
1205	2R_DroMel_CAF1	4,788,635 – 4,788,761	- - - - - - - - -	2094	4,788,635 – 4,788,729	+	4	102	69.77	-1.79	0.51	0.754651
1205	2R_DroMel_CAF1	4,788,635 – 4,788,761	- - - - - - - - -	2095	4,788,658 – 4,788,761	+	5	118	68.44	-1.42	0.61	0.714717
1206	2R_DroMel_CAF1	4,804,704 – 4,804,801	- - - - - - - - -	2096	4,804,704 – 4,804,801	-	5	97	96.29	-1.58	0.93	0.967378
1207	2R_DroMel_CAF1	4,805,251 – 4,805,444	- - - - - - - - -	2097	4,805,251 – 4,805,371	+	5	120	94.67	-1.85	0.93	0.996020
				2098	4,805,291 – 4,805,407	-	5	116	98.02	-1.51	0.97	0.944674
				2099	4,805,331 – 4,805,444	-	5	115	95.20	-1.71	0.95	0.994221
1208	2R_DroMel_CAF1	4,805,632 – 4,805,746	- - - - - - - - -	2100	4,805,632 – 4,805,746	+	5	114	94.04	-2.59	0.80	0.980139
1209	2R_DroMel_CAF1	4,806,090 – 4,806,181	- - - - - - - - -	2101	4,806,090 – 4,806,181	+	5	96	89.46	-1.65	0.75	0.623035
1210	2R_DroMel_CAF1	4,806,545 – 4,806,689	- - - - - - - - -	2102	4,806,545 – 4,806,659	+	5	114	93.33	-2.11	0.83	0.980183
				2103	4,806,579 – 4,806,689	+	5	110	96.36	-1.82	0.92	0.991165
				2104	4,806,579 – 4,806,689	-	5	110	96.36	-1.24	0.96	0.815354
1211	2R_DroMel_CAF1	4,807,346 – 4,807,516	- - - - - - - - -	2105	4,807,346 – 4,807,439	+	4	93	75.46	-1.65	0.67	0.767668
				2106	4,807,346 – 4,807,439	-	4	93	75.46	-1.53	0.66	0.569127
				2107	4,807,359 – 4,807,479	+	6	120	75.56	-2.29	0.69	0.987161
				2108	4,807,359 – 4,807,479	-	6	120	75.56	-2.13	0.66	0.979462
				2109	4,807,399 – 4,807,516	+	6	117	76.18	-1.77	0.55	0.766398
				2110	4,807,399 – 4,807,516	-	6	117	76.18	-1.70	0.60	0.832660
1212	2R_DroMel_CAF1	4,815,052 – 4,815,146	- - - - - - - - -	2111	4,815,052 – 4,815,146	+	6	100	77.21	-2.48	0.46	0.922181
1213	2R_DroMel_CAF1	4,817,495 – 4,817,587	- - - "knownCDS=Parent=FBtr0088598;Name=Myd88-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2078-RA" - - - - -	2112	4,817,495 – 4,817,587	+	6	92	87.10	-1.61	0.83	0.520958
1214	2R_DroMel_CAF1	4,821,184 – 4,821,286	- - - - - - - - -	2113	4,821,184 – 4,821,286	-	5	103	94.50	-1.40	0.82	0.570849
1215	2R_DroMel_CAF1	4,824,153 – 4,824,250	- - - - - - - - -	2114	4,824,153 – 4,824,250	+	5	97	94.01	-1.76	0.86	0.965482
1215	2R_DroMel_CAF1	4,824,153 – 4,824,250	- - - - - - - - -	2115	4,824,153 – 4,824,250	-	5	97	94.01	-1.50	0.96	0.981638
1216	2R_DroMel_CAF1	4,824,826 – 4,824,937	- - "RNAmicro=f:4824838_t:4824957_strand:+_p:0.998325" - - - - - -	2116	4,824,826 – 4,824,918	+	4	120	82.23	-2.66	0.95	0.997159
				2117	4,824,826 – 4,824,918	-	4	120	82.23	-2.79	0.99	0.998507
				2118	4,824,838 – 4,824,937	+	4	120	83.11	-2.90	0.95	0.998273
				2119	4,824,838 – 4,824,937	-	4	120	83.11	-3.57	0.98	0.999357
1217	2R_DroMel_CAF1	4,828,922 – 4,829,014	- - - - - - - - -	2120	4,828,922 – 4,829,014	+	3	120	69.37	-1.58	0.60	0.929336
1218	2R_DroMel_CAF1	4,829,315 – 4,829,418	- - - - - - - - -	2121	4,829,315 – 4,829,418	+	5	120	80.16	-1.64	0.65	0.586595
1219	2R_DroMel_CAF1	4,829,878 – 4,829,974	- - - "knownCDS=Parent=FBtr0088558;Name=CG13739-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13739-RA" - - - - -	2122	4,829,878 – 4,829,974	+	6	101	84.80	-2.37	0.72	0.604762
1220	2R_DroMel_CAF1	4,830,893 – 4,830,985	- - - "knownCDS=Parent=FBtr0088558;Name=CG13739-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13739-RA" - - - - -	2123	4,830,893 – 4,830,985	+	6	104	83.80	-2.09	0.74	0.684704
1220	2R_DroMel_CAF1	4,830,893 – 4,830,985		2124	4,830,893 – 4,830,985	-	6	104	83.80	-1.96	0.81	0.775475
1221	2R_DroMel_CAF1	4,831,174 – 4,831,285	- - - "knownCDS=Parent=FBtr0088558;Name=CG13739-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13739-RA" - - - - -	2125	4,831,174 – 4,831,285	-	6	114	86.19	-1.80	0.88	0.824256
1222	2R_DroMel_CAF1	4,831,972 – 4,832,084	- - - - - - - - -	2126	4,831,972 – 4,832,084	+	6	120	84.98	-1.95	0.75	0.539892
1223	2R_DroMel_CAF1	4,832,143 – 4,832,248	- - - - - - - - -	2127	4,832,143 – 4,832,248	+	5	120	84.16	-1.65	0.69	0.545120
1224	2R_DroMel_CAF1	4,836,375 – 4,836,491	- - - - - - - - -	2128	4,836,375 – 4,836,491	+	5	120	85.61	-2.49	0.70	0.915054
1224	2R_DroMel_CAF1	4,836,375 – 4,836,491	- - - - - - - - -	2129	4,836,375 – 4,836,491	-	5	120	85.61	-3.37	0.72	0.992033
1225	2R_DroMel_CAF1	4,837,402 – 4,837,508	- - - - - - - - -	2130	4,837,402 – 4,837,508	+	5	107	86.41	-1.60	0.81	0.668770
1226	2R_DroMel_CAF1	4,839,594 – 4,839,696	- - - - - - - - -	2131	4,839,594 – 4,839,696	+	3	102	94.77	-2.17	0.91	0.836101
1227	2R_DroMel_CAF1	4,840,340 – 4,840,500	- - - - - - - - -	2132	4,840,340 – 4,840,460	-	3	120	85.00	-3.17	0.83	0.981009
1227	2R_DroMel_CAF1	4,840,340 – 4,840,500	- - - - - - - - -	2133	4,840,380 – 4,840,500	-	3	120	92.13	-2.11	0.82	0.592269
1228	2R_DroMel_CAF1	4,841,049 – 4,841,166	- - - - - - - - -	2134	4,841,049 – 4,841,166	-	3	117	90.86	-2.38	0.78	0.666575
1229	2R_DroMel_CAF1	4,841,360 – 4,841,452	- - - - - - - - -	2135	4,841,360 – 4,841,452	+	4	107	77.10	-2.11	0.70	0.974056
1230	2R_DroMel_CAF1	4,841,464 – 4,841,559	- - - - - - - - -	2136	4,841,464 – 4,841,559	+	4	105	74.75	-2.46	0.60	0.994366
1230	2R_DroMel_CAF1	4,841,464 – 4,841,559	- - - - - - - - -	2137	4,841,464 – 4,841,559	-	4	105	74.75	-3.12	0.61	0.999831
1231	2R_DroMel_CAF1	4,843,301 – 4,843,425	- - - - - - - - -	2138	4,843,301 – 4,843,400	+	3	108	89.21	-2.00	0.94	0.920059
				2139	4,843,301 – 4,843,400	-	3	108	89.21	-2.66	0.86	0.923147
				2140	4,843,329 – 4,843,425	+	3	120	79.77	-2.32	0.86	0.991533
				2141	4,843,329 – 4,843,425	-	3	120	79.77	-2.28	0.75	0.975593
1232	2R_DroMel_CAF1	4,848,659 – 4,848,789	- - - - - - - - -	2142	4,848,659 – 4,848,763	-	4	109	79.34	-2.36	0.63	0.965181
1232	2R_DroMel_CAF1	4,848,659 – 4,848,789	- - - - - - - - -	2143	4,848,691 – 4,848,789	-	5	112	79.87	-2.34	0.45	0.856702
1233	2R_DroMel_CAF1	4,849,986 – 4,850,082	- - - - - - - - -	2144	4,849,986 – 4,850,082	-	3	102	88.93	-2.84	0.92	0.980707
1234	2R_DroMel_CAF1	4,850,764 – 4,850,865	- - - - - - - - -	2145	4,850,764 – 4,850,865	-	3	101	94.72	-1.93	0.86	0.549156
1235	2R_DroMel_CAF1	4,851,032 – 4,851,134	- - - - - - - - -	2146	4,851,032 – 4,851,134	+	3	110	83.33	-2.34	0.72	0.880765
1236	2R_DroMel_CAF1	4,851,295 – 4,851,495	- - - - - - - - -	2147	4,851,295 – 4,851,415	+	3	120	95.56	-1.69	0.92	0.573796
1236	2R_DroMel_CAF1	4,851,295 – 4,851,495	- - - - - - - - -	2148	4,851,375 – 4,851,495	+	3	120	71.15	-1.70	0.63	0.972630
1237	2R_DroMel_CAF1	4,852,374 – 4,852,510	- - - - - - - - -	2149	4,852,374 – 4,852,478	+	3	104	96.15	-1.93	0.88	0.597531
				2150	4,852,374 – 4,852,478	-	3	104	96.15	-2.45	0.97	0.969443
				2151	4,852,407 – 4,852,510	+	3	103	95.47	-1.83	0.91	0.639525
1238	2R_DroMel_CAF1	4,852,943 – 4,853,040	- - - - - - - - -	2152	4,852,943 – 4,853,040	+	3	97	94.50	-1.80	0.97	0.824909
1238	2R_DroMel_CAF1	4,852,943 – 4,853,040	- - - - - - - - -	2153	4,852,943 – 4,853,040	-	3	97	94.50	-1.96	0.93	0.809034
1239	2R_DroMel_CAF1	4,860,838 – 4,860,934	- - - - - - - - -	2154	4,860,838 – 4,860,934	+	6	107	73.64	-1.94	0.61	0.966790
1240	2R_DroMel_CAF1	4,861,352 – 4,861,445	- - - - - - - - -	2155	4,861,352 – 4,861,445	-	4	93	77.72	-1.81	0.61	0.648000
1241	2R_DroMel_CAF1	4,861,533 – 4,861,627	- - - - - - - - -	2156	4,861,533 – 4,861,627	+	5	96	77.74	-1.33	0.06	0.500000
1242	2R_DroMel_CAF1	4,873,181 – 4,873,300	- - - - - - - - -	2157	4,873,181 – 4,873,300	+	5	119	77.44	-1.89	0.24	0.729484
1243	2R_DroMel_CAF1	4,878,541 – 4,878,651	- - - - - - - - -	2158	4,878,541 – 4,878,651	-	3	110	84.47	-0.77	0.93	0.567393
1244	2R_DroMel_CAF1	4,879,782 – 4,879,873	- - - - - - - - -	2159	4,879,782 – 4,879,873	-	6	93	86.56	-3.29	0.76	0.837010
1245	2R_DroMel_CAF1	4,881,350 – 4,881,441	- - - - - - - - -	2160	4,881,350 – 4,881,441	-	6	108	72.64	-2.67	0.55	0.996491
1246	2R_DroMel_CAF1	4,881,623 – 4,881,726	- - - - - - - - -	2161	4,881,623 – 4,881,726	-	6	109	76.33	-1.93	0.90	0.969497
1247	2R_DroMel_CAF1	4,882,116 – 4,882,219	- - - "knownCDS=texon1137;Parent=CG_NCBI_GNO_32243810, CG_RGUI_GID_mRNA_40002742, CG_DGIL_SNO_28355212, CG_BATZ_CON_47003202" - - - - -	2162	4,882,116 – 4,882,219	+	6	114	74.31	-1.04	0.68	0.622757
1247	2R_DroMel_CAF1	4,882,116 – 4,882,219		2163	4,882,116 – 4,882,219	-	6	114	74.31	-1.01	0.82	0.896936
1248	2R_DroMel_CAF1	4,882,677 – 4,882,769	- - - - - - - - -	2164	4,882,677 – 4,882,769	-	6	115	79.58	-1.85	0.62	0.780965
1249	2R_DroMel_CAF1	4,891,036 – 4,891,138	- - - - - - - - -	2165	4,891,036 – 4,891,138	+	3	104	85.57	-2.12	0.70	0.636996
1250	2R_DroMel_CAF1	4,895,529 – 4,895,629	- - - - - - - - -	2166	4,895,529 – 4,895,629	-	6	107	85.73	-2.53	0.73	0.568228
1251	2R_DroMel_CAF1	4,895,665 – 4,895,768	- - - - - - - - -	2167	4,895,665 – 4,895,768	-	5	104	94.97	-1.39	0.89	0.852379
1252	2R_DroMel_CAF1	4,896,615 – 4,896,706	- - - - - - - - -	2168	4,896,615 – 4,896,706	+	6	108	68.65	-2.02	0.29	0.643143
1252	2R_DroMel_CAF1	4,896,615 – 4,896,706	- - - - - - - - -	2169	4,896,615 – 4,896,706	-	6	108	68.65	-2.04	0.27	0.588701
1253	2R_DroMel_CAF1	4,902,741 – 4,902,873	- - - "knownCDS=Parent=FBtr0089292;Name=l(2)03659-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8799-RA" - - - - -	2170	4,902,741 – 4,902,849	-	5	115	81.93	-2.18	0.76	0.939931
1253	2R_DroMel_CAF1	4,902,741 – 4,902,873		2171	4,902,774 – 4,902,873	-	5	99	92.63	-1.45	0.90	0.911266
1254	2R_DroMel_CAF1	4,905,721 – 4,905,997	- - - "knownCDS=Parent=FBtr0089292;Name=l(2)03659-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8799-RA" - - - - -	2172	4,905,721 – 4,905,841	+	5	120	91.17	-1.48	0.86	0.833186
				2173	4,905,801 – 4,905,921	+	5	120	91.25	-1.90	0.79	0.893974
				2174	4,905,841 – 4,905,957	+	5	120	90.07	-2.54	0.76	0.951207
				2175	4,905,881 – 4,905,997	+	5	120	87.24	-1.95	0.73	0.768209
1255	2R_DroMel_CAF1	4,906,597 – 4,906,717	- - - "knownCDS=Parent=FBtr0089292;Name=l(2)03659-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8799-RA" - - - - -	2176	4,906,597 – 4,906,717	-	5	120	91.17	-2.00	0.74	0.709204
1256	2R_DroMel_CAF1	4,908,120 – 4,908,212	- - - - - - - - -	2177	4,908,120 – 4,908,212	-	5	95	75.24	-2.32	0.19	0.984204
1257	2R_DroMel_CAF1	4,910,410 – 4,910,561	- - - "knownCDS=Parent=FBtr0088554;Name=CG8801-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8801-RA" - - - - -	2178	4,910,410 – 4,910,524	+	6	119	80.76	-1.64	0.60	0.514270
				2179	4,910,450 – 4,910,561	+	6	115	80.13	-2.31	0.70	0.928173
				2180	4,910,450 – 4,910,561	-	6	115	80.13	-2.42	0.81	0.949451
1258	2R_DroMel_CAF1	4,911,341 – 4,911,441	- - - "knownCDS=Parent=FBtr0088505;Name=l(2)k10201-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13951-RA" - - - - -	2181	4,911,341 – 4,911,441	+	5	109	72.10	-1.93	0.23	0.887423
1259	2R_DroMel_CAF1	4,914,948 – 4,915,042	- - - - - - - - -	2182	4,914,948 – 4,915,042	+	6	114	78.41	-1.86	0.54	0.659285
1259	2R_DroMel_CAF1	4,914,948 – 4,915,042	- - - - - - - - -	2183	4,914,948 – 4,915,042	-	6	114	78.41	-1.64	0.59	0.633963
1260	2R_DroMel_CAF1	4,924,188 – 4,924,357	- - - - - - - - -	2184	4,924,188 – 4,924,291	+	5	120	73.03	-2.31	0.30	0.986985
				2185	4,924,188 – 4,924,291	-	5	120	73.03	-2.37	0.54	0.993777
				2186	4,924,251 – 4,924,357	-	5	107	85.16	-2.05	0.62	0.564494
1261	2R_DroMel_CAF1	4,924,849 – 4,924,967	- - - - - - - - -	2187	4,924,849 – 4,924,942	+	6	94	87.61	-2.20	0.80	0.632732
1261	2R_DroMel_CAF1	4,924,849 – 4,924,967	- - - - - - - - -	2188	4,924,872 – 4,924,967	-	6	107	82.36	-2.19	0.58	0.559841
1262	2R_DroMel_CAF1	4,926,439 – 4,926,545	- - - - - - - - -	2189	4,926,439 – 4,926,545	-	6	117	79.95	-1.98	0.67	0.866941
1263	2R_DroMel_CAF1	4,927,069 – 4,927,168	- - - "knownCDS=Parent=FBtr0088506;Name=wun2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8805-RA" - - - - -	2190	4,927,069 – 4,927,168	-	6	107	78.23	-1.62	0.59	0.645257
1264	2R_DroMel_CAF1	4,929,319 – 4,929,416	- - - - - - - - -	2191	4,929,319 – 4,929,416	+	6	97	80.15	-1.50	0.76	0.786360
1265	2R_DroMel_CAF1	4,931,776 – 4,931,896	- - - - - - - - -	2192	4,931,776 – 4,931,896	-	3	120	80.22	-1.99	0.66	0.811207
1266	2R_DroMel_CAF1	4,931,930 – 4,932,025	- - - - - - - - -	2193	4,931,930 – 4,932,025	+	4	120	74.30	-2.22	0.52	0.895040
1266	2R_DroMel_CAF1	4,931,930 – 4,932,025	- - - - - - - - -	2194	4,931,930 – 4,932,025	-	4	120	74.30	-2.68	0.38	0.650487
1267	2R_DroMel_CAF1	4,933,130 – 4,933,427	- - - - - - - - -	2195	4,933,130 – 4,933,247	+	4	120	84.06	-2.24	0.70	0.913846
				2196	4,933,130 – 4,933,247	-	4	120	84.06	-2.82	0.72	0.984300
				2197	4,933,170 – 4,933,271	+	4	120	76.55	-3.03	0.65	0.999635
				2198	4,933,170 – 4,933,271	-	4	120	76.55	-2.59	0.65	0.997254
				2199	4,933,207 – 4,933,310	+	4	120	85.65	-2.15	0.59	0.538908
				2200	4,933,207 – 4,933,310	-	4	120	85.65	-1.96	0.67	0.742626
				2201	4,933,310 – 4,933,427	+	4	120	78.99	-2.94	0.50	0.944602
1268	2R_DroMel_CAF1	4,935,835 – 4,935,931	- - - - - - - - -	2202	4,935,835 – 4,935,931	+	4	96	85.59	-1.48	0.75	0.568671
1269	2R_DroMel_CAF1	4,936,693 – 4,936,789	- - - - - - - - -	2203	4,936,693 – 4,936,789	-	6	112	62.86	-1.46	0.42	0.591638
1270	2R_DroMel_CAF1	4,944,480 – 4,944,597	- - - "knownCDS=Parent=FBtr0088508;Name=Pdk-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8808-RA" - - - - -	2204	4,944,480 – 4,944,597	-	6	117	80.11	-1.32	0.67	0.580025
1271	2R_DroMel_CAF1	4,947,367 – 4,947,458	- - - - - - - - -	2205	4,947,367 – 4,947,458	+	6	104	72.00	-1.12	0.64	0.592836
1272	2R_DroMel_CAF1	4,971,398 – 4,971,501	- - - - - - - - -	2206	4,971,398 – 4,971,501	-	4	104	85.83	-2.17	0.66	0.795451
1273	2R_DroMel_CAF1	4,974,272 – 4,974,381	- - - - - - - - -	2207	4,974,272 – 4,974,381	+	4	112	76.70	-1.93	0.58	0.746006
1274	2R_DroMel_CAF1	4,983,322 – 4,983,421	- - - - - - - - -	2208	4,983,322 – 4,983,421	+	6	106	84.31	-2.35	0.78	0.782463
1275	2R_DroMel_CAF1	5,007,624 – 5,007,743	- - - - - - - - -	2209	5,007,624 – 5,007,714	+	6	93	81.55	-2.13	0.67	0.805037
1275	2R_DroMel_CAF1	5,007,624 – 5,007,743	- - - - - - - - -	2210	5,007,647 – 5,007,743	-	6	105	81.15	-1.53	0.69	0.649195
1276	2R_DroMel_CAF1	5,008,710 – 5,008,800	- - - - - - - - -	2211	5,008,710 – 5,008,800	+	6	90	94.22	-1.61	0.93	0.978291
1276	2R_DroMel_CAF1	5,008,710 – 5,008,800	- - - - - - - - -	2212	5,008,710 – 5,008,800	-	6	90	94.22	-1.99	0.89	0.981108
1277	2R_DroMel_CAF1	5,016,032 – 5,016,140	- - - - - - - - -	2213	5,016,032 – 5,016,140	+	4	113	84.36	-2.89	0.57	0.821085
1278	2R_DroMel_CAF1	5,016,341 – 5,016,455	- - - - - - - - -	2214	5,016,341 – 5,016,455	-	5	119	89.05	-2.10	0.73	0.809380
1279	2R_DroMel_CAF1	5,017,676 – 5,017,766	- - - - - - - - -	2215	5,017,676 – 5,017,766	-	4	90	97.22	-1.63	0.97	0.671498
1280	2R_DroMel_CAF1	5,018,167 – 5,018,283	- - - - - - - - -	2216	5,018,167 – 5,018,270	+	5	119	78.95	-2.19	0.70	0.965726
				2217	5,018,167 – 5,018,270	-	5	119	78.95	-3.39	0.64	0.999209
				2218	5,018,191 – 5,018,283	+	5	96	93.40	-1.15	0.88	0.513113
				2219	5,018,191 – 5,018,283	-	5	96	93.40	-1.88	0.79	0.863263
1281	2R_DroMel_CAF1	5,018,661 – 5,018,758	- - - - - - - - -	2220	5,018,661 – 5,018,758	+	6	109	80.36	-1.79	0.75	0.856695
1282	2R_DroMel_CAF1	5,019,458 – 5,019,548	- - - - - - - - -	2221	5,019,458 – 5,019,548	+	6	90	73.64	-3.36	0.36	0.997589
1283	2R_DroMel_CAF1	5,021,698 – 5,021,818	- - - "knownCDS=Parent=FBtr0088513;Name=CG12933-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12933-RA" - - - - -	2222	5,021,698 – 5,021,818	-	6	120	95.33	-2.14	0.83	0.810556
1284	2R_DroMel_CAF1	5,024,830 – 5,024,928	- - - - - - - - -	2223	5,024,830 – 5,024,928	-	6	104	75.98	-2.89	0.38	0.974648
1285	2R_DroMel_CAF1	5,025,907 – 5,025,997	- - - - - - - - -	2224	5,025,907 – 5,025,997	-	6	94	91.15	-1.77	0.89	0.922703
1286	2R_DroMel_CAF1	5,026,806 – 5,026,905	- - - - - - - - -	2225	5,026,806 – 5,026,905	+	5	99	91.32	-1.86	0.80	0.888340
1287	2R_DroMel_CAF1	5,027,286 – 5,027,382	- - - - - - - - -	2226	5,027,286 – 5,027,382	-	5	109	76.19	-1.60	0.59	0.526332
1288	2R_DroMel_CAF1	5,028,361 – 5,028,457	- - - - - - - - -	2227	5,028,361 – 5,028,457	+	5	96	93.01	-3.31	0.87	0.999831
1288	2R_DroMel_CAF1	5,028,361 – 5,028,457	- - - - - - - - -	2228	5,028,361 – 5,028,457	-	5	96	93.01	-1.41	0.80	0.541368
1289	2R_DroMel_CAF1	5,029,333 – 5,029,423	- - - - - - - - -	2229	5,029,333 – 5,029,423	+	6	103	84.59	-2.71	0.65	0.539274
1290	2R_DroMel_CAF1	5,029,698 – 5,029,800	- - - - - - - - -	2230	5,029,698 – 5,029,800	+	5	111	95.27	-2.11	0.95	0.999451
1290	2R_DroMel_CAF1	5,029,698 – 5,029,800	- - - - - - - - -	2231	5,029,698 – 5,029,800	-	5	111	95.27	-1.38	0.92	0.892952
1291	2R_DroMel_CAF1	5,030,198 – 5,030,393	- - - - - - - - -	2232	5,030,198 – 5,030,317	+	5	119	85.93	-2.17	0.70	0.820292
				2233	5,030,238 – 5,030,357	+	5	119	96.22	-3.58	0.90	0.999849
				2234	5,030,238 – 5,030,357	-	5	119	96.22	-1.44	0.98	0.967611
				2235	5,030,278 – 5,030,393	+	5	115	97.39	-2.13	0.97	0.999173
1292	2R_DroMel_CAF1	5,032,124 – 5,032,258	- - - - - - - - -	2236	5,032,124 – 5,032,238	-	5	114	96.47	-1.30	0.88	0.604936
1292	2R_DroMel_CAF1	5,032,124 – 5,032,258	- - - - - - - - -	2237	5,032,160 – 5,032,258	-	5	98	96.92	-1.20	0.95	0.733628
1293	2R_DroMel_CAF1	5,035,726 – 5,035,914	- - "RNAmicro=f:5035804_t:5035918_strand:+_p:0.954173" "knownCDS=Parent=FBtr0088514;Name=CG12932-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12932-RA" - - - - -	2238	5,035,726 – 5,035,842	-	3	116	97.70	-3.32	0.98	0.991805
				2239	5,035,766 – 5,035,880	-	4	114	87.87	-2.52	0.87	0.986241
				2240	5,035,804 – 5,035,914	+	4	115	81.93	-2.05	0.76	0.916106
				2241	5,035,804 – 5,035,914	-	4	115	81.93	-1.95	0.70	0.840982
1294	2R_DroMel_CAF1	5,036,263 – 5,036,500	- - - - - - - - -	2242	5,036,263 – 5,036,368	+	3	120	80.35	-1.54	0.68	0.511127
				2243	5,036,263 – 5,036,368	-	3	120	80.35	-2.60	0.75	0.988795
				2244	5,036,296 – 5,036,408	-	3	120	88.89	-2.23	0.79	0.693878
				2245	5,036,408 – 5,036,500	+	3	92	95.65	-1.96	0.92	0.772177
1295	2R_DroMel_CAF1	5,039,206 – 5,039,341	- - - - - - - - -	2246	5,039,206 – 5,039,301	+	6	120	76.92	-1.47	0.74	0.904633
				2247	5,039,206 – 5,039,301	-	6	120	76.92	-1.89	0.72	0.960018
				2248	5,039,227 – 5,039,341	+	6	120	81.59	-2.02	0.78	0.862101
				2249	5,039,227 – 5,039,341	-	6	120	81.59	-2.03	0.77	0.856912
1296	2R_DroMel_CAF1	5,055,232 – 5,055,375	- - - - - - - - -	2250	5,055,232 – 5,055,335	+	4	120	81.28	-2.54	0.71	0.985692
				2251	5,055,232 – 5,055,335	-	4	120	81.28	-2.72	0.77	0.994849
				2252	5,055,260 – 5,055,375	+	4	120	92.64	-2.92	0.93	0.995919
				2253	5,055,260 – 5,055,375	-	4	120	92.64	-2.62	0.89	0.986350
1297	2R_DroMel_CAF1	5,056,198 – 5,056,309	- - - - - - - - -	2254	5,056,198 – 5,056,309	+	4	111	88.54	-1.62	0.76	0.652146
1298	2R_DroMel_CAF1	5,057,661 – 5,057,775	- - - "knownCDS=Parent=FBtr0088547;Name=CG1888-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1888-RA" - - - - -	2255	5,057,661 – 5,057,775	+	4	117	88.02	-1.54	0.71	0.555074
1299	2R_DroMel_CAF1	5,059,021 – 5,059,184	- - - - - - - - -	2256	5,059,021 – 5,059,112	-	4	120	78.04	-3.19	0.73	0.999758
				2257	5,059,054 – 5,059,152	-	4	120	84.40	-2.20	0.85	0.957320
				2258	5,059,076 – 5,059,184	-	3	108	96.30	-2.16	0.96	0.909302
1300	2R_DroMel_CAF1	5,061,128 – 5,061,305	- - - - - - - - -	2259	5,061,128 – 5,061,230	-	4	120	81.85	-2.11	0.58	0.650055
				2260	5,061,152 – 5,061,266	+	4	117	91.17	-1.73	0.84	0.773306
				2261	5,061,190 – 5,061,305	+	4	116	94.23	-1.54	0.84	0.507335
1301	2R_DroMel_CAF1	5,062,594 – 5,062,697	- - - - - - - - -	2262	5,062,594 – 5,062,697	+	4	112	86.67	-2.51	0.70	0.910223
1301	2R_DroMel_CAF1	5,062,594 – 5,062,697	- - - - - - - - -	2263	5,062,594 – 5,062,697	-	4	112	86.67	-1.72	0.72	0.692896
1302	2R_DroMel_CAF1	5,063,541 – 5,063,644	- - - - - - - - -	2264	5,063,541 – 5,063,644	+	5	105	84.59	-2.72	0.52	0.639047
1303	2R_DroMel_CAF1	5,064,415 – 5,064,515	- - - - - - - - -	2265	5,064,415 – 5,064,515	+	5	115	79.62	-2.00	0.61	0.833970
1303	2R_DroMel_CAF1	5,064,415 – 5,064,515	- - - - - - - - -	2266	5,064,415 – 5,064,515	-	5	115	79.62	-1.91	0.51	0.566243
1304	2R_DroMel_CAF1	5,065,546 – 5,065,665	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002244; Name=dme-mir-14" - "RNAmicro=f:5065546_t:5065665_strand:-_p:0.880648" - - - "miRBase=dme-mir-14\|7e-31" - -	2267	5,065,546 – 5,065,665	+	5	120	94.39	-3.78	1.00	0.999996
1304	2R_DroMel_CAF1	5,065,546 – 5,065,665		2268	5,065,546 – 5,065,665	-	5	120	94.39	-1.29	0.90	0.791378
1305	2R_DroMel_CAF1	5,065,851 – 5,065,977	- - - - - - - - -	2269	5,065,851 – 5,065,944	+	5	120	71.17	-3.11	0.26	0.999422
				2270	5,065,851 – 5,065,944	-	5	120	71.17	-3.49	0.25	0.999726
				2271	5,065,882 – 5,065,977	-	4	96	93.89	-1.40	0.91	0.557026
1306	2R_DroMel_CAF1	5,068,056 – 5,068,159	- - - - - - - - -	2272	5,068,056 – 5,068,159	+	4	103	89.11	-1.51	0.73	0.533209
1307	2R_DroMel_CAF1	5,069,843 – 5,069,935	- - - - - - - - -	2273	5,069,843 – 5,069,935	-	4	93	94.90	-1.55	0.92	0.681629
1308	2R_DroMel_CAF1	5,070,132 – 5,070,226	- - - - - - - - -	2274	5,070,132 – 5,070,226	+	5	95	96.62	-1.25	0.89	0.576714
1309	2R_DroMel_CAF1	5,070,243 – 5,070,337	- - - - - - - - -	2275	5,070,243 – 5,070,337	-	4	96	87.50	-1.57	0.76	0.632784
1310	2R_DroMel_CAF1	5,071,515 – 5,071,619	- - - "knownCDS=Parent=FBtr0088519;Name=Or45b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12931-RA" - - - - -	2276	5,071,515 – 5,071,619	+	6	115	81.30	-1.42	0.66	0.528491
1311	2R_DroMel_CAF1	5,073,154 – 5,073,256	- - - - - - - - -	2277	5,073,154 – 5,073,256	-	5	106	79.03	-2.67	0.53	0.985086
1312	2R_DroMel_CAF1	5,085,458 – 5,085,572	- - - - - - - - -	2278	5,085,458 – 5,085,572	-	6	119	78.06	-1.17	0.67	0.556071
1313	2R_DroMel_CAF1	5,089,726 – 5,089,816	- - - - - - - - -	2279	5,089,726 – 5,089,816	+	6	91	84.46	-2.06	0.79	0.735226
1314	2R_DroMel_CAF1	5,094,762 – 5,094,881	- - - "knownCDS=Parent=FBtr0088542, FBtr0088543;Name=CG1868-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1868-RB, FlyBase+Annotation+IDs:CG1868-RA" - - - - -	2280	5,094,762 – 5,094,881	+	6	119	79.89	-1.41	0.63	0.534074
1315	2R_DroMel_CAF1	5,095,388 – 5,095,585	- - - "knownCDS=Parent=FBtr0088543;Name=CG1868-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1868-RA" - - - - -	2281	5,095,388 – 5,095,505	-	5	120	76.31	-1.87	0.43	0.642188
				2282	5,095,428 – 5,095,545	+	6	120	76.95	-2.16	0.55	0.924378
				2283	5,095,428 – 5,095,545	-	6	120	76.95	-2.51	0.39	0.841750
				2284	5,095,465 – 5,095,585	+	6	120	78.72	-1.84	0.54	0.612108
1316	2R_DroMel_CAF1	5,100,289 – 5,100,394	- - - "knownCDS=Parent=FBtr0088540;Name=CG12928-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12928-RA" - - - - -	2285	5,100,289 – 5,100,394	+	6	108	83.58	-2.40	0.62	0.548886
1317	2R_DroMel_CAF1	5,102,246 – 5,102,363	- - - - - - - - -	2286	5,102,246 – 5,102,363	+	5	120	73.54	-1.90	0.47	0.822259
1318	2R_DroMel_CAF1	5,106,957 – 5,107,070	- - - "knownCDS=Parent=FBtr0089739;Name=CG1863-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1863-RB" - - - - -	2287	5,106,957 – 5,107,070	-	6	114	75.18	-1.83	0.54	0.822955
1319	2R_DroMel_CAF1	5,107,991 – 5,108,086	- - - - - - - - -	2288	5,107,991 – 5,108,086	-	6	101	75.03	-1.63	0.61	0.844777
1320	2R_DroMel_CAF1	5,114,460 – 5,114,580	- - - "knownCDS=Parent=FBtr0088534;Name=CG30339-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30339-RA" - - - - -	2289	5,114,460 – 5,114,580	-	6	120	81.11	-1.82	0.61	0.609979
1321	2R_DroMel_CAF1	5,123,533 – 5,123,663	- - - - - - - - -	2290	5,123,533 – 5,123,624	+	6	94	81.28	-1.17	0.75	0.519026
1321	2R_DroMel_CAF1	5,123,533 – 5,123,663	- - - - - - - - -	2291	5,123,563 – 5,123,663	+	4	103	90.05	-1.42	0.82	0.549302
1322	2R_DroMel_CAF1	5,130,842 – 5,130,938	- - - - - - - - -	2292	5,130,842 – 5,130,938	-	6	116	66.92	-2.30	0.24	0.797997
1323	2R_DroMel_CAF1	5,132,021 – 5,132,127	- - - - - - - - -	2293	5,132,021 – 5,132,127	-	4	106	80.68	-1.79	0.60	0.521472
1324	2R_DroMel_CAF1	5,133,025 – 5,133,165	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002246; Name=dme-mir-307" - "RNAmicro=f:5133062_t:5133170_strand:+_p:0.827408" - - - "miRBase=dme-mir-307\|1e-45" - -	2294	5,133,025 – 5,133,141	+	6	118	82.88	-2.04	0.92	0.939313
				2295	5,133,025 – 5,133,141	-	6	118	82.88	-1.85	0.91	0.891821
				2296	5,133,062 – 5,133,165	+	6	109	91.85	-3.46	0.95	0.999951
				2297	5,133,062 – 5,133,165	-	6	109	91.85	-4.43	1.00	0.999987
1325	2R_DroMel_CAF1	5,133,747 – 5,133,837	- - - - - - - - -	2298	5,133,747 – 5,133,837	-	6	114	74.27	-2.00	0.61	0.968829
1326	2R_DroMel_CAF1	5,137,533 – 5,137,635	- - - - - - - - -	2299	5,137,533 – 5,137,635	+	4	102	94.61	-2.63	0.94	0.988562
1326	2R_DroMel_CAF1	5,137,533 – 5,137,635	- - - - - - - - -	2300	5,137,533 – 5,137,635	-	4	102	94.61	-3.27	0.96	0.996079
1327	2R_DroMel_CAF1	5,138,206 – 5,138,299	- - - - - - - - -	2301	5,138,206 – 5,138,299	-	6	96	76.67	-1.63	0.67	0.900967
1328	2R_DroMel_CAF1	5,138,684 – 5,138,777	- - - - - - - - -	2302	5,138,684 – 5,138,777	-	6	94	78.26	-2.06	0.65	0.937968
1329	2R_DroMel_CAF1	5,139,021 – 5,139,136	- - - - - - - - -	2303	5,139,021 – 5,139,136	+	4	115	91.67	-2.60	0.89	0.988336
1330	2R_DroMel_CAF1	5,140,833 – 5,140,947	- - - - - - - - -	2304	5,140,833 – 5,140,947	-	3	119	80.95	-1.62	0.82	0.798606
1331	2R_DroMel_CAF1	5,143,981 – 5,144,075	- - - - - - - - -	2305	5,143,981 – 5,144,075	+	6	99	82.55	-1.90	0.63	0.551867
1332	2R_DroMel_CAF1	5,144,195 – 5,144,314	- - - - - - - - -	2306	5,144,195 – 5,144,297	+	6	105	82.91	-1.90	0.73	0.691710
1332	2R_DroMel_CAF1	5,144,195 – 5,144,314	- - - - - - - - -	2307	5,144,223 – 5,144,314	+	4	93	87.75	-2.22	0.77	0.912860
1333	2R_DroMel_CAF1	5,151,699 – 5,151,797	- - - - - - - - -	2308	5,151,699 – 5,151,797	+	6	100	72.26	-1.76	0.52	0.843757
1334	2R_DroMel_CAF1	5,153,553 – 5,153,687	- - - - - - - - -	2309	5,153,553 – 5,153,662	+	6	120	81.30	-2.55	0.77	0.929533
				2310	5,153,553 – 5,153,662	-	6	120	81.30	-1.76	0.70	0.752737
				2311	5,153,582 – 5,153,687	+	6	120	80.39	-2.16	0.82	0.932641
				2312	5,153,582 – 5,153,687	-	6	120	80.39	-1.91	0.76	0.882751
1335	2R_DroMel_CAF1	5,154,560 – 5,154,650	- - - - - - - - -	2313	5,154,560 – 5,154,650	-	6	94	91.46	-3.08	0.87	0.996876
1336	2R_DroMel_CAF1	5,156,385 – 5,156,480	- - - - - - - - -	2314	5,156,385 – 5,156,480	-	5	104	76.83	-1.61	0.15	0.632830
1337	2R_DroMel_CAF1	5,157,677 – 5,157,775	- - - - - - - - -	2315	5,157,677 – 5,157,775	-	5	105	72.21	-2.13	0.05	0.938037
1338	2R_DroMel_CAF1	5,160,004 – 5,160,102	- - - - - - - - -	2316	5,160,004 – 5,160,102	+	5	104	76.25	-1.80	0.67	0.897928
1339	2R_DroMel_CAF1	5,163,243 – 5,163,363	- - - - - - - - -	2317	5,163,243 – 5,163,334	+	6	118	75.63	-2.29	0.61	0.982239
1339	2R_DroMel_CAF1	5,163,243 – 5,163,363	- - - - - - - - -	2318	5,163,258 – 5,163,363	+	6	120	77.72	-1.82	0.76	0.946350
1340	2R_DroMel_CAF1	5,165,443 – 5,165,542	- - - - - - - - -	2319	5,165,443 – 5,165,542	+	6	99	91.85	-1.98	0.82	0.607177
1341	2R_DroMel_CAF1	5,168,166 – 5,168,294	- - - - - - - - -	2320	5,168,166 – 5,168,269	+	6	107	83.32	-4.65	0.79	0.974650
				2321	5,168,166 – 5,168,269	-	6	107	83.32	-2.92	0.67	0.793886
				2322	5,168,204 – 5,168,294	+	6	108	81.60	-4.40	0.79	0.967882
1342	2R_DroMel_CAF1	5,177,555 – 5,177,659	- - - - - - - - -	2323	5,177,555 – 5,177,659	-	6	104	94.11	-1.31	0.89	0.651919
1343	2R_DroMel_CAF1	5,180,536 – 5,180,632	- - - - - - - - -	2324	5,180,536 – 5,180,632	+	6	103	78.80	-2.09	0.82	0.952901
1344	2R_DroMel_CAF1	5,180,729 – 5,180,825	- - - - - - - - -	2325	5,180,729 – 5,180,825	-	6	99	72.00	-2.80	0.38	0.994505
1345	2R_DroMel_CAF1	5,191,763 – 5,191,855	- - - - - - - - -	2326	5,191,763 – 5,191,855	+	6	92	75.04	-2.40	0.54	0.983148
1346	2R_DroMel_CAF1	5,201,285 – 5,201,387	- - - "knownCDS=Parent=FBtr0088499;Name=Uba1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1782-RA" - - - - -	2327	5,201,285 – 5,201,387	+	6	117	74.73	-1.40	0.67	0.863882
1347	2R_DroMel_CAF1	5,201,643 – 5,201,749	- - - "knownCDS=Parent=FBtr0088499;Name=Uba1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1782-RA" - - - - -	2328	5,201,643 – 5,201,749	+	6	109	77.33	-1.29	0.65	0.640533
1348	2R_DroMel_CAF1	5,208,084 – 5,208,188	- - - - - - - - -	2329	5,208,084 – 5,208,188	-	6	107	92.19	-1.05	0.91	0.509730
1349	2R_DroMel_CAF1	5,218,597 – 5,218,735	- - - "knownCDS=Parent=FBtr0088467;Name=CG1773-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1773-RA" - - - - -	2330	5,218,597 – 5,218,711	+	3	114	91.81	-1.77	0.86	0.520808
1349	2R_DroMel_CAF1	5,218,597 – 5,218,735		2331	5,218,631 – 5,218,735	+	3	104	94.23	-2.72	0.93	0.968854
1350	2R_DroMel_CAF1	5,219,569 – 5,219,689	- - - "knownCDS=Parent=FBtr0088468;Name=CG10459-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10459-RA" - - - - -	2332	5,219,569 – 5,219,689	+	6	120	81.06	-2.03	0.69	0.830492
1350	2R_DroMel_CAF1	5,219,569 – 5,219,689		2333	5,219,569 – 5,219,689	-	6	120	81.06	-1.48	0.68	0.631258
1351	2R_DroMel_CAF1	5,225,015 – 5,225,132	- - - "knownCDS=Parent=FBtr0088470;Name=dap-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1772-RB" - - - - -	2334	5,225,015 – 5,225,132	+	6	117	90.88	-0.99	0.96	0.680960
1352	2R_DroMel_CAF1	5,227,389 – 5,227,515	- - - - - - - - -	2335	5,227,389 – 5,227,483	+	6	94	81.63	-2.27	0.70	0.849436
				2336	5,227,389 – 5,227,483	-	6	94	81.63	-2.48	0.61	0.813593
				2337	5,227,423 – 5,227,515	+	6	94	83.17	-2.96	0.70	0.848048
				2338	5,227,423 – 5,227,515	-	6	94	83.17	-2.21	0.65	0.621858
1353	2R_DroMel_CAF1	5,227,633 – 5,227,735	- - - - - - - - -	2339	5,227,633 – 5,227,735	+	6	104	78.97	-2.78	0.63	0.973296
1354	2R_DroMel_CAF1	5,229,090 – 5,229,206	- - - "knownCDS=Parent=FBtr0088498;Name=CG30004-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30004-RA" - - - - -	2340	5,229,090 – 5,229,206	-	6	116	74.45	-2.26	0.35	0.753742
1355	2R_DroMel_CAF1	5,231,010 – 5,231,105	- - - - - - - - -	2341	5,231,010 – 5,231,105	+	4	95	92.11	-1.89	0.78	0.709984
1356	2R_DroMel_CAF1	5,232,993 – 5,233,094	- - - "knownCDS=Parent=FBtr0088497;Name=CG1776-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1776-RA" - - - - -	2342	5,232,993 – 5,233,094	-	6	102	78.64	-1.13	0.67	0.500000
1357	2R_DroMel_CAF1	5,233,425 – 5,233,526	- - - - - - - - -	2343	5,233,425 – 5,233,526	+	4	113	83.23	-2.09	0.74	0.909379
1357	2R_DroMel_CAF1	5,233,425 – 5,233,526	- - - - - - - - -	2344	5,233,425 – 5,233,526	-	4	113	83.23	-2.38	0.77	0.969597
1358	2R_DroMel_CAF1	5,236,018 – 5,236,109	- - - - - - - - -	2345	5,236,018 – 5,236,109	+	4	102	82.73	-1.58	0.73	0.605126
1359	2R_DroMel_CAF1	5,237,571 – 5,237,669	- - - - - - - - -	2346	5,237,571 – 5,237,669	+	6	104	87.01	-2.35	0.76	0.537377
1360	2R_DroMel_CAF1	5,238,036 – 5,238,127	- - - - - - - - -	2347	5,238,036 – 5,238,127	+	6	93	84.43	-2.65	0.66	0.571924
1361	2R_DroMel_CAF1	5,247,508 – 5,247,616	- - - - - - - - -	2348	5,247,508 – 5,247,616	-	5	120	78.26	-1.46	0.07	0.552670
1362	2R_DroMel_CAF1	5,251,661 – 5,251,779	- - - - - - - - -	2349	5,251,661 – 5,251,779	+	5	120	70.53	-1.88	0.25	0.791583
1362	2R_DroMel_CAF1	5,251,661 – 5,251,779	- - - - - - - - -	2350	5,251,661 – 5,251,779	-	5	120	70.53	-1.76	0.38	0.637053
1363	2R_DroMel_CAF1	5,255,658 – 5,255,749	- - - - - - - - -	2351	5,255,658 – 5,255,749	+	6	101	74.95	-1.64	0.51	0.538320
1363	2R_DroMel_CAF1	5,255,658 – 5,255,749	- - - - - - - - -	2352	5,255,658 – 5,255,749	-	6	101	74.95	-1.82	0.54	0.825798
1364	2R_DroMel_CAF1	5,262,407 – 5,262,514	- - - - - - - - -	2353	5,262,407 – 5,262,514	+	6	111	80.48	-1.84	0.58	0.582391
1365	2R_DroMel_CAF1	5,267,952 – 5,268,065	- - - - - - - - -	2354	5,267,952 – 5,268,065	-	6	113	74.08	-1.78	0.59	0.918226
1366	2R_DroMel_CAF1	5,271,177 – 5,271,321	- - - - - - - - -	2355	5,271,177 – 5,271,281	+	3	116	82.30	-0.96	0.93	0.845395
1366	2R_DroMel_CAF1	5,271,177 – 5,271,321	- - - - - - - - -	2356	5,271,207 – 5,271,321	+	3	120	85.80	-1.56	0.86	0.594582
1367	2R_DroMel_CAF1	5,276,668 – 5,276,819	- - "RNAmicro=f:5276708_t:5276818_strand:+_p:0.977713" "knownCDS=Parent=FBtr0088472;Name=trpl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18345-RC" - - - - -	2357	5,276,668 – 5,276,785	-	6	120	77.06	-1.88	0.48	0.512226
				2358	5,276,708 – 5,276,819	+	6	111	80.24	-1.47	0.66	0.632833
				2359	5,276,708 – 5,276,819	-	6	111	80.24	-2.55	0.64	0.929510
1368	2R_DroMel_CAF1	5,280,930 – 5,281,076	- - - "knownCDS=Parent=FBtr0088495;Name=CG1688-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1688-RA" - - - - -	2360	5,280,930 – 5,281,037	-	5	108	86.50	-1.77	0.72	0.629347
1368	2R_DroMel_CAF1	5,280,930 – 5,281,076		2361	5,280,957 – 5,281,076	-	5	119	83.28	-1.71	0.65	0.516683
1369	2R_DroMel_CAF1	5,293,124 – 5,293,227	- - - - - - - - -	2362	5,293,124 – 5,293,227	+	4	103	80.26	-1.76	0.62	0.563068
1370	2R_DroMel_CAF1	5,294,061 – 5,294,156	- - - - - - - - -	2363	5,294,061 – 5,294,156	+	6	107	79.08	-2.39	0.55	0.907366
1370	2R_DroMel_CAF1	5,294,061 – 5,294,156	- - - - - - - - -	2364	5,294,061 – 5,294,156	-	6	107	79.08	-3.10	0.49	0.970039
1371	2R_DroMel_CAF1	5,294,719 – 5,294,815	- - - - - - - - -	2365	5,294,719 – 5,294,815	-	6	98	88.14	-2.84	0.80	0.846510
1372	2R_DroMel_CAF1	5,298,147 – 5,298,247	- - - - - - - - -	2366	5,298,147 – 5,298,247	-	5	104	73.11	-2.15	0.59	0.983972
1373	2R_DroMel_CAF1	5,307,786 – 5,307,904	- - - - - - - - -	2367	5,307,786 – 5,307,904	-	4	120	69.14	-1.79	0.47	0.557019
1374	2R_DroMel_CAF1	5,315,232 – 5,315,337	- - - - - - - - -	2368	5,315,232 – 5,315,337	+	6	114	83.50	-1.78	0.68	0.509957
1375	2R_DroMel_CAF1	5,315,573 – 5,315,663	- - - - - - - - -	2369	5,315,573 – 5,315,663	+	5	90	84.70	-2.27	0.63	0.734992
1376	2R_DroMel_CAF1	5,316,822 – 5,316,914	- - - - - - - - -	2370	5,316,822 – 5,316,914	-	6	102	77.33	-2.14	0.52	0.873472
1377	2R_DroMel_CAF1	5,320,591 – 5,320,695	- - - - - - - - -	2371	5,320,591 – 5,320,695	-	6	118	82.08	-1.80	0.62	0.544720
1378	2R_DroMel_CAF1	5,321,064 – 5,321,164	- - - - - - - - -	2372	5,321,064 – 5,321,164	-	3	104	89.74	-2.38	0.70	0.514303
1379	2R_DroMel_CAF1	5,322,515 – 5,322,612	- - - - - - - - -	2373	5,322,515 – 5,322,612	-	5	112	68.72	-2.16	0.18	0.845750
1380	2R_DroMel_CAF1	5,324,099 – 5,324,199	- - - - - - - - -	2374	5,324,099 – 5,324,199	-	3	120	78.82	-1.60	0.73	0.754769
1381	2R_DroMel_CAF1	5,324,385 – 5,324,517	- - - - - - - - -	2375	5,324,385 – 5,324,498	-	6	119	78.05	-1.77	0.62	0.827441
1381	2R_DroMel_CAF1	5,324,385 – 5,324,517	- - - - - - - - -	2376	5,324,425 – 5,324,517	-	6	101	81.49	-1.49	0.71	0.640725
1382	2R_DroMel_CAF1	5,328,127 – 5,328,228	- - "RNAmicro=f:5328127_t:5328227_strand:+_p:0.994750" "knownCDS=Parent=FBtr0088475;Name=lectin-46Cb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1652-RA" - - - - -	2377	5,328,127 – 5,328,228	-	4	101	88.28	-2.95	0.87	0.994329
1383	2R_DroMel_CAF1	5,330,979 – 5,331,080	- - - - - - - - -	2378	5,330,979 – 5,331,080	-	4	108	81.29	-2.34	0.67	0.953492
1384	2R_DroMel_CAF1	5,337,164 – 5,337,277	- - - "knownCDS=Parent=FBtr0088491;Name=CG1625-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1625-RA" - - - - -	2379	5,337,164 – 5,337,277	+	6	117	77.59	-2.16	0.50	0.824102
1385	2R_DroMel_CAF1	5,338,483 – 5,338,590	- - - "knownCDS=Parent=FBtr0088491;Name=CG1625-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1625-RA" - - - - -	2380	5,338,483 – 5,338,590	+	6	111	80.36	-1.65	0.63	0.655294
1386	2R_DroMel_CAF1	5,344,942 – 5,345,041	- - - - - - - - -	2381	5,344,942 – 5,345,041	-	5	109	76.28	-2.34	0.38	0.971314
1387	2R_DroMel_CAF1	5,358,761 – 5,358,876	- - - - - - - - -	2382	5,358,761 – 5,358,876	-	5	119	68.65	-2.27	0.53	0.992505
1388	2R_DroMel_CAF1	5,360,823 – 5,360,943	- - - "knownCDS=Parent=FBtr0088373;Name=CG1671-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1671-RA" - - - - -	2383	5,360,823 – 5,360,943	-	6	120	82.22	-1.62	0.70	0.624034
1389	2R_DroMel_CAF1	5,364,937 – 5,365,041	- - - "knownCDS=Parent=FBtr0088454, FBtr0088455, FBtr0088456, FBtr0088457, FBtr0088458, FBtr0088459, FBtr0088460, FBtr0088461, FBtr0088462;Name=CG1516-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1516-RI, FlyBase+Annotation+IDs:CG1516-RE, FlyBase+Annotation+IDs:CG1516-RD, FlyBase+Annotation+IDs:CG1516-RA, FlyBase+Annotation+IDs:CG1516-RJ, FlyBase+Annotation+IDs:CG1516-RB, FlyBase+Annotation+IDs:CG1516-RK, FlyBase+Annotation+IDs:CG1516-RL, FlyBase+Annotation+IDs:CG1516-RG" - - - - -	2384	5,364,937 – 5,365,041	+	6	107	78.52	-1.30	0.66	0.620307
1390	2R_DroMel_CAF1	5,374,391 – 5,374,511	- - - - - - - - -	2385	5,374,391 – 5,374,511	+	3	120	93.06	-3.11	0.86	0.942202
1391	2R_DroMel_CAF1	5,378,429 – 5,378,569	- - - - - - - - -	2386	5,378,429 – 5,378,549	-	5	120	92.55	-1.44	0.82	0.653231
1391	2R_DroMel_CAF1	5,378,429 – 5,378,569	- - - - - - - - -	2387	5,378,469 – 5,378,569	+	5	120	75.47	-1.64	0.56	0.529875
1392	2R_DroMel_CAF1	5,392,697 – 5,392,793	- - - "knownCDS=Parent=FBtr0088451;Name=CG1472-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1472-RA" - - - - -	2388	5,392,697 – 5,392,793	+	6	113	70.41	-1.71	0.48	0.769991
1393	2R_DroMel_CAF1	5,395,701 – 5,395,811	- - - "knownCDS=Parent=FBtr0088450;Name=CG1513-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1513-RA" - - - - -	2389	5,395,701 – 5,395,811	+	6	120	80.18	-1.46	0.62	0.513673
1394	2R_DroMel_CAF1	5,397,249 – 5,397,354	- - - "knownCDS=Parent=FBtr0088450;Name=CG1513-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1513-RA" - - - - -	2390	5,397,249 – 5,397,354	-	6	114	78.47	-1.31	0.68	0.686059
1395	2R_DroMel_CAF1	5,399,123 – 5,399,227	- - - "knownCDS=Parent=FBtr0088450;Name=CG1513-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1513-RA" - - - - -	2391	5,399,123 – 5,399,227	-	6	118	78.43	-1.48	0.65	0.717933
1396	2R_DroMel_CAF1	5,400,264 – 5,400,368	- - - "knownCDS=Parent=FBtr0088379;Name=CG12923-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12923-RA" - - - - -	2392	5,400,264 – 5,400,368	+	6	109	73.08	-1.52	0.56	0.698135
1397	2R_DroMel_CAF1	5,405,951 – 5,406,071	- - - "knownCDS=Parent=FBtr0088381;Name=CG30007-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30007-RB" - - - - -	2393	5,405,951 – 5,406,071	-	5	120	88.33	-2.02	0.67	0.517607
1398	2R_DroMel_CAF1	5,408,888 – 5,409,020	- - - "knownCDS=Parent=FBtr0088382;Name=CG30007-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30007-RA" - - - - -	2394	5,408,888 – 5,409,008	+	5	120	89.67	-2.37	0.88	0.998121
				2395	5,408,928 – 5,409,020	+	5	92	91.41	-2.10	0.85	0.988535
				2396	5,408,928 – 5,409,020	-	5	92	91.41	-1.16	0.92	0.587825
1399	2R_DroMel_CAF1	5,412,555 – 5,412,665	- - - "knownCDS=Parent=FBtr0088448, FBtr0088449;Name=CG1441-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1441-RA, FlyBase+Annotation+IDs:CG1441-RB" - - - - -	2397	5,412,555 – 5,412,665	-	6	119	74.54	-1.25	0.71	0.861519
1400	2R_DroMel_CAF1	5,413,165 – 5,413,308	- - - - - - - - -	2398	5,413,165 – 5,413,274	-	5	109	91.49	-2.04	0.86	0.988947
				2399	5,413,201 – 5,413,308	+	5	107	93.60	-1.45	0.92	0.941578
				2400	5,413,201 – 5,413,308	-	5	107	93.60	-2.49	0.96	0.999948
1401	2R_DroMel_CAF1	5,413,329 – 5,413,431	- - - - - - - - -	2401	5,413,329 – 5,413,431	+	5	102	96.46	-2.66	0.87	0.998542
1401	2R_DroMel_CAF1	5,413,329 – 5,413,431	- - - - - - - - -	2402	5,413,329 – 5,413,431	-	5	102	96.46	-2.98	0.95	0.999954
1402	2R_DroMel_CAF1	5,420,219 – 5,420,470	- - - - - - - - -	2403	5,420,219 – 5,420,334	-	4	120	72.50	-1.49	0.63	0.635450
				2404	5,420,295 – 5,420,404	+	5	110	79.10	-2.15	0.60	0.909612
				2405	5,420,374 – 5,420,470	+	5	96	92.86	-1.35	0.83	0.625753
1403	2R_DroMel_CAF1	5,427,570 – 5,427,671	- - - - - - - - -	2406	5,427,570 – 5,427,671	-	5	101	80.46	-1.76	0.58	0.508909
1404	2R_DroMel_CAF1	5,429,725 – 5,429,823	- - - "knownCDS=Parent=FBtr0088447;Name=Mef2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1429-RF" - - - - -	2407	5,429,725 – 5,429,823	+	6	107	75.00	-1.14	0.65	0.547274
1404	2R_DroMel_CAF1	5,429,725 – 5,429,823		2408	5,429,725 – 5,429,823	-	6	107	75.00	-1.44	0.62	0.757415
1405	2R_DroMel_CAF1	5,435,731 – 5,435,850	- - - - - - - - -	2409	5,435,731 – 5,435,850	+	5	119	93.77	-1.36	0.91	0.880810
1405	2R_DroMel_CAF1	5,435,731 – 5,435,850	- - - - - - - - -	2410	5,435,731 – 5,435,850	-	5	119	93.77	-2.59	0.90	0.999710
1406	2R_DroMel_CAF1	5,439,510 – 5,439,645	- - - - - - - - -	2411	5,439,510 – 5,439,616	-	5	106	91.31	-1.71	0.87	0.957509
				2412	5,439,550 – 5,439,645	+	6	108	77.85	-1.74	0.66	0.887931
				2413	5,439,550 – 5,439,645	-	6	108	77.85	-1.92	0.66	0.928700
1407	2R_DroMel_CAF1	5,440,315 – 5,440,420	- - - - - - - - -	2414	5,440,315 – 5,440,420	+	5	111	88.18	-1.65	0.73	0.557292
1408	2R_DroMel_CAF1	5,441,523 – 5,441,616	- - - - - - - - -	2415	5,441,523 – 5,441,616	+	4	94	92.10	-1.51	0.86	0.638171
1409	2R_DroMel_CAF1	5,444,780 – 5,444,873	- - - - - - - - -	2416	5,444,780 – 5,444,873	+	5	95	82.01	-2.78	0.93	0.997352
1409	2R_DroMel_CAF1	5,444,780 – 5,444,873	- - - - - - - - -	2417	5,444,780 – 5,444,873	-	5	95	82.01	-2.75	0.83	0.994804
1410	2R_DroMel_CAF1	5,450,885 – 5,450,992	- - - - - - - - -	2418	5,450,885 – 5,450,992	+	5	108	96.28	-1.60	0.82	0.678534
1411	2R_DroMel_CAF1	5,451,252 – 5,451,344	- - - - - - - - -	2419	5,451,252 – 5,451,344	+	3	92	88.52	-2.28	0.71	0.565135
1412	2R_DroMel_CAF1	5,457,039 – 5,457,134	- - - - - - - - -	2420	5,457,039 – 5,457,134	+	5	97	96.98	-2.02	0.93	0.997089
1413	2R_DroMel_CAF1	5,459,599 – 5,459,716	- - - - - - - - -	2421	5,459,599 – 5,459,716	-	5	117	94.02	-1.69	0.82	0.832185
1414	2R_DroMel_CAF1	5,460,123 – 5,460,220	- - - - - - - - -	2422	5,460,123 – 5,460,220	+	5	97	88.95	-1.42	0.85	0.650346
1415	2R_DroMel_CAF1	5,469,609 – 5,469,702	- - - - - - - - -	2423	5,469,609 – 5,469,702	+	4	96	80.07	-1.76	0.63	0.603988
1416	2R_DroMel_CAF1	5,472,336 – 5,472,438	- - - "knownCDS=Parent=FBtr0088385;Name=CG12130-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12130-RA" - - - - -	2424	5,472,336 – 5,472,438	+	6	114	81.45	-1.87	0.62	0.643795
1416	2R_DroMel_CAF1	5,472,336 – 5,472,438		2425	5,472,336 – 5,472,438	-	6	114	81.45	-1.65	0.67	0.656075
1417	2R_DroMel_CAF1	5,475,773 – 5,475,863	- - - - - - - - -	2426	5,475,773 – 5,475,863	+	6	99	76.26	-2.51	0.52	0.977212
1417	2R_DroMel_CAF1	5,475,773 – 5,475,863	- - - - - - - - -	2427	5,475,773 – 5,475,863	-	6	99	76.26	-2.06	0.47	0.767045
1418	2R_DroMel_CAF1	5,476,802 – 5,476,909	- - - - - - - - -	2428	5,476,802 – 5,476,909	-	5	107	95.05	-1.58	0.84	0.813629
1419	2R_DroMel_CAF1	5,479,938 – 5,480,058	- - - "knownCDS=Parent=FBtr0088386;Name=CG12133-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12133-RA" - - - - -	2429	5,479,938 – 5,480,058	+	4	120	83.89	-1.68	0.73	0.687876
1420	2R_DroMel_CAF1	5,481,612 – 5,481,714	- - - - - - - - -	2430	5,481,612 – 5,481,714	+	6	111	78.83	-2.40	0.44	0.701413
1421	2R_DroMel_CAF1	5,483,629 – 5,483,733	- - - "knownCDS=Parent=FBtr0088389;Name=CG12134-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12134-RB" - - - - -	2431	5,483,629 – 5,483,733	-	6	110	77.63	-1.58	0.61	0.706604
1422	2R_DroMel_CAF1	5,484,169 – 5,484,274	- - - "knownCDS=Parent=FBtr0088389;Name=CG12134-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12134-RB" - - - - -	2432	5,484,169 – 5,484,274	+	6	109	78.34	-0.90	0.76	0.530920
1423	2R_DroMel_CAF1	5,488,098 – 5,488,209	- - - - - - - - -	2433	5,488,098 – 5,488,209	+	5	115	90.84	-2.63	0.69	0.717401
1424	2R_DroMel_CAF1	5,489,311 – 5,489,415	- - - - - - - - -	2434	5,489,311 – 5,489,415	-	4	118	80.93	-2.53	0.60	0.942428
1425	2R_DroMel_CAF1	5,490,727 – 5,490,817	- - - - - - - - -	2435	5,490,727 – 5,490,817	+	6	102	80.78	-1.15	0.74	0.543770
1425	2R_DroMel_CAF1	5,490,727 – 5,490,817	- - - - - - - - -	2436	5,490,727 – 5,490,817	-	6	102	80.78	-1.24	0.69	0.525210
1426	2R_DroMel_CAF1	5,493,642 – 5,493,733	- - - - - - - - -	2437	5,493,642 – 5,493,733	-	5	101	70.28	-2.48	0.09	0.962385
1427	2R_DroMel_CAF1	5,496,807 – 5,496,900	- - - - - - - - -	2438	5,496,807 – 5,496,900	+	4	93	94.60	-2.00	0.93	0.939647
1427	2R_DroMel_CAF1	5,496,807 – 5,496,900	- - - - - - - - -	2439	5,496,807 – 5,496,900	-	4	93	94.60	-1.90	0.96	0.936956
1428	2R_DroMel_CAF1	5,497,508 – 5,497,599	- - - - - - - - -	2440	5,497,508 – 5,497,599	+	4	95	86.74	-1.58	0.69	0.566902
1428	2R_DroMel_CAF1	5,497,508 – 5,497,599	- - - - - - - - -	2441	5,497,508 – 5,497,599	-	4	95	86.74	-1.82	0.64	0.547326
1429	2R_DroMel_CAF1	5,498,502 – 5,498,603	- - - - - - - - -	2442	5,498,502 – 5,498,603	-	3	117	80.47	-1.29	0.83	0.655060
1430	2R_DroMel_CAF1	5,498,826 – 5,498,946	- - - - - - - - -	2443	5,498,826 – 5,498,946	+	5	120	97.67	-1.21	0.94	0.631949
1431	2R_DroMel_CAF1	5,499,255 – 5,499,449	- - - - - - - - -	2444	5,499,255 – 5,499,372	+	4	120	93.08	-1.39	0.88	0.538719
				2445	5,499,292 – 5,499,412	-	4	120	98.06	-1.98	0.98	0.842912
				2446	5,499,332 – 5,499,449	+	4	120	90.72	-1.59	0.87	0.744033
				2447	5,499,332 – 5,499,449	-	4	120	90.72	-1.75	0.94	0.919912
1432	2R_DroMel_CAF1	5,500,202 – 5,500,300	- - - - - - - - -	2448	5,500,202 – 5,500,300	+	5	120	73.48	-1.46	0.66	0.763563
1433	2R_DroMel_CAF1	5,500,497 – 5,500,648	- - - - - - - - -	2449	5,500,497 – 5,500,608	+	5	111	96.40	-2.53	0.93	0.999776
				2450	5,500,497 – 5,500,608	-	5	111	96.40	-1.31	0.88	0.621763
				2451	5,500,537 – 5,500,648	+	5	111	88.62	-2.12	0.82	0.970440
1434	2R_DroMel_CAF1	5,500,869 – 5,500,961	- - - - - - - - -	2452	5,500,869 – 5,500,961	-	5	120	72.15	-1.73	0.47	0.637190
1435	2R_DroMel_CAF1	5,505,083 – 5,505,175	- - - - - - - - -	2453	5,505,083 – 5,505,175	+	6	92	79.42	-1.63	0.69	0.811219
1436	2R_DroMel_CAF1	5,506,281 – 5,506,376	- - - - - - - - -	2454	5,506,281 – 5,506,376	-	5	95	95.45	-1.41	0.96	0.952036
1437	2R_DroMel_CAF1	5,510,721 – 5,510,830	- - - - - - - - -	2455	5,510,721 – 5,510,830	-	6	109	90.09	-2.24	0.81	0.672611
1438	2R_DroMel_CAF1	5,511,205 – 5,511,335	- - - "knownCDS=Parent=FBtr0088437, FBtr0088438, FBtr0088439;Name=Pka-R2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15862-RA, FlyBase+Annotation+IDs:CG15862-RB, FlyBase+Annotation+IDs:CG15862-RC" - - - - -	2456	5,511,205 – 5,511,295	-	6	101	74.67	-1.58	0.76	0.965746
1438	2R_DroMel_CAF1	5,511,205 – 5,511,335		2457	5,511,222 – 5,511,335	-	6	120	82.15	-1.46	0.73	0.591453
1439	2R_DroMel_CAF1	5,516,535 – 5,516,627	- - "RNAmicro=f:5516535_t:5516629_strand:-_p:0.986396" - - - - - -	2458	5,516,535 – 5,516,627	+	5	95	90.44	-4.49	0.78	0.998116
1439	2R_DroMel_CAF1	5,516,535 – 5,516,627		2459	5,516,535 – 5,516,627	-	5	95	90.44	-3.20	0.86	0.999788
1440	2R_DroMel_CAF1	5,519,956 – 5,520,050	- - - - - - - - -	2460	5,519,956 – 5,520,050	-	5	103	88.55	-2.32	0.82	0.983533
1441	2R_DroMel_CAF1	5,521,269 – 5,521,424	- - - - - - - - -	2461	5,521,269 – 5,521,367	-	6	108	80.36	-1.11	0.72	0.519948
				2462	5,521,299 – 5,521,405	+	5	110	84.14	-1.73	0.82	0.758785
				2463	5,521,299 – 5,521,405	-	5	110	84.14	-1.51	0.74	0.500000
				2464	5,521,333 – 5,521,424	-	5	95	81.36	-2.11	0.74	0.924544
1442	2R_DroMel_CAF1	5,521,526 – 5,521,630	- - - - - - - - -	2465	5,521,526 – 5,521,630	+	5	104	96.54	-1.19	0.93	0.680780
1442	2R_DroMel_CAF1	5,521,526 – 5,521,630	- - - - - - - - -	2466	5,521,526 – 5,521,630	-	5	104	96.54	-1.62	0.85	0.835888
1443	2R_DroMel_CAF1	5,521,857 – 5,521,950	- - - - - - - - -	2467	5,521,857 – 5,521,950	-	5	93	96.56	-2.26	0.88	0.995810
1444	2R_DroMel_CAF1	5,523,133 – 5,523,229	- - - - - - - - -	2468	5,523,133 – 5,523,229	-	6	103	74.52	-1.97	0.47	0.814797
1445	2R_DroMel_CAF1	5,524,938 – 5,525,067	- - - - - - - - -	2469	5,524,938 – 5,525,053	+	5	115	88.09	-3.27	0.77	0.995724
1445	2R_DroMel_CAF1	5,524,938 – 5,525,067	- - - - - - - - -	2470	5,524,976 – 5,525,067	+	4	91	96.70	-1.78	0.91	0.709046
1446	2R_DroMel_CAF1	5,525,230 – 5,525,365	- - - - - - - - -	2471	5,525,230 – 5,525,343	-	5	118	78.62	-1.92	0.63	0.847247
1446	2R_DroMel_CAF1	5,525,230 – 5,525,365	- - - - - - - - -	2472	5,525,267 – 5,525,365	-	5	100	89.81	-2.16	0.88	0.994873
1447	2R_DroMel_CAF1	5,527,106 – 5,527,207	- - - - - - - - -	2473	5,527,106 – 5,527,207	+	3	101	97.36	-1.70	0.97	0.740987
1447	2R_DroMel_CAF1	5,527,106 – 5,527,207	- - - - - - - - -	2474	5,527,106 – 5,527,207	-	3	101	97.36	-2.08	0.87	0.649335
1448	2R_DroMel_CAF1	5,527,534 – 5,527,644	- - - - - - - - -	2475	5,527,534 – 5,527,644	+	5	120	77.30	-1.91	0.82	0.973680
1448	2R_DroMel_CAF1	5,527,534 – 5,527,644	- - - - - - - - -	2476	5,527,534 – 5,527,644	-	5	120	77.30	-1.44	0.70	0.636959
1449	2R_DroMel_CAF1	5,528,001 – 5,528,097	- - - - - - - - -	2477	5,528,001 – 5,528,097	+	5	98	83.53	-2.02	0.58	0.552975
1450	2R_DroMel_CAF1	5,534,158 – 5,534,254	- - - - - - - - -	2478	5,534,158 – 5,534,254	-	3	97	87.24	-1.88	0.90	0.851821
1451	2R_DroMel_CAF1	5,543,066 – 5,543,251	- - - "knownCDS=Parent=FBtr0088435, FBtr0088436;Name=CG1407-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1407-RB, FlyBase+Annotation+IDs:CG1407-RA" - - - - -	2479	5,543,066 – 5,543,181	-	6	117	77.27	-1.58	0.65	0.825979
1451	2R_DroMel_CAF1	5,543,066 – 5,543,251		2480	5,543,141 – 5,543,251	-	6	113	80.42	-1.72	0.61	0.637542
1452	2R_DroMel_CAF1	5,545,612 – 5,545,732	- - - "knownCDS=Parent=FBtr0088395;Name=CG12129-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12129-RA" - - - - -	2481	5,545,612 – 5,545,732	-	5	120	93.58	-1.38	0.93	0.923845
1453	2R_DroMel_CAF1	5,551,419 – 5,551,568	- - - "knownCDS=Parent=FBtr0088434;Name=CG18445-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18445-RA" - - - - -	2482	5,551,419 – 5,551,528	+	6	110	79.76	-1.83	0.67	0.843705
1453	2R_DroMel_CAF1	5,551,419 – 5,551,568		2483	5,551,448 – 5,551,568	-	6	120	80.22	-1.51	0.65	0.627878
1454	2R_DroMel_CAF1	5,558,396 – 5,558,496	- - - - - - - - -	2484	5,558,396 – 5,558,496	-	5	103	84.68	-1.61	0.69	0.513197
1455	2R_DroMel_CAF1	5,560,422 – 5,560,525	- - - - - - - - -	2485	5,560,422 – 5,560,525	+	4	113	81.07	-1.85	0.63	0.680889
1456	2R_DroMel_CAF1	5,561,734 – 5,561,827	- - - - - - - - -	2486	5,561,734 – 5,561,827	+	3	93	90.65	-1.43	0.95	0.638619
1456	2R_DroMel_CAF1	5,561,734 – 5,561,827	- - - - - - - - -	2487	5,561,734 – 5,561,827	-	3	93	90.65	-2.06	0.82	0.612248
1457	2R_DroMel_CAF1	5,563,571 – 5,563,672	- - - - - - - - -	2488	5,563,571 – 5,563,672	+	6	101	76.57	-1.07	0.68	0.585283
1458	2R_DroMel_CAF1	5,574,604 – 5,574,698	- - - - - - - - -	2489	5,574,604 – 5,574,698	+	6	100	79.44	-1.69	0.64	0.765951
1459	2R_DroMel_CAF1	5,575,049 – 5,575,162	- - - - - - - - -	2490	5,575,049 – 5,575,162	+	4	116	91.91	-2.35	0.78	0.853522
1460	2R_DroMel_CAF1	5,578,177 – 5,578,297	- - - "knownCDS=Parent=FBtr0088431;Name=CG2292-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2292-RA" - - - - -	2491	5,578,177 – 5,578,297	-	6	120	79.94	-1.17	0.73	0.600195
1461	2R_DroMel_CAF1	5,579,420 – 5,579,540	- - - "knownCDS=Parent=FBtr0088429, FBtr0088430;Name=cdc2rk-cds, ;Dbxref=FlyBase+Annotation+IDs:CG1362-RA, FlyBase+Annotation+IDs:CG1362-RB" - - - - -	2492	5,579,420 – 5,579,540	+	6	120	75.94	-2.32	0.34	0.634543
1462	2R_DroMel_CAF1	5,581,813 – 5,581,923	- - - - - - - - -	2493	5,581,813 – 5,581,923	+	6	113	82.34	-1.98	0.80	0.829214
1463	2R_DroMel_CAF1	5,590,004 – 5,590,121	- - - - - - - - -	2494	5,590,004 – 5,590,121	+	4	120	88.47	-2.03	0.70	0.712615
1464	2R_DroMel_CAF1	5,590,849 – 5,590,939	- - - "knownCDS=Parent=FBtr0088405, FBtr0088406;Name=egr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12919-RA, FlyBase+Annotation+IDs:CG12919-RB" - - - - -	2495	5,590,849 – 5,590,939	-	6	90	78.03	-1.18	0.66	0.551713
1465	2R_DroMel_CAF1	5,591,279 – 5,591,373	- - - - - - - - -	2496	5,591,279 – 5,591,373	+	3	94	97.16	-2.41	1.00	0.973691
1465	2R_DroMel_CAF1	5,591,279 – 5,591,373	- - - - - - - - -	2497	5,591,279 – 5,591,373	-	3	94	97.16	-2.68	0.89	0.898789
1466	2R_DroMel_CAF1	5,596,488 – 5,596,587	- - - - - - - - -	2498	5,596,488 – 5,596,587	+	5	115	81.31	-2.08	0.47	0.506065
1467	2R_DroMel_CAF1	5,602,441 – 5,602,572	- - - "knownCDS=Parent=FBtr0088407, FBtr0088409;Name=CG2269-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2269-RC, FlyBase+Annotation+IDs:CG2269-RB" - - - - -	2499	5,602,441 – 5,602,532	-	6	91	79.82	-1.89	0.66	0.843362
1467	2R_DroMel_CAF1	5,602,441 – 5,602,572		2500	5,602,469 – 5,602,572	-	6	108	77.76	-1.76	0.57	0.708129
1468	2R_DroMel_CAF1	5,607,309 – 5,607,399	- - - - - - - - -	2501	5,607,309 – 5,607,399	-	6	108	78.68	-1.61	0.69	0.847822
1469	2R_DroMel_CAF1	5,609,508 – 5,609,622	- - - "knownCDS=Parent=FBtr0088410, FBtr0088411;Name=Jra-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2275-RB, FlyBase+Annotation+IDs:CG2275-RA" - - - - -	2502	5,609,508 – 5,609,622	-	6	114	78.62	-1.90	0.52	0.578847
1470	2R_DroMel_CAF1	5,614,370 – 5,614,519	- - - - - - - - -	2503	5,614,370 – 5,614,488	-	5	118	87.37	-1.87	0.68	0.539076
1470	2R_DroMel_CAF1	5,614,370 – 5,614,519	- - - - - - - - -	2504	5,614,408 – 5,614,519	-	5	120	81.28	-2.43	0.53	0.876949
1471	2R_DroMel_CAF1	5,617,805 – 5,617,990	- - - - - - - - -	2505	5,617,805 – 5,617,925	+	5	120	96.08	-1.33	0.96	0.908854
1471	2R_DroMel_CAF1	5,617,805 – 5,617,990	- - - - - - - - -	2506	5,617,885 – 5,617,990	+	5	120	73.06	-1.96	0.70	0.987986
1472	2R_DroMel_CAF1	5,622,610 – 5,622,703	- - - - - - - - -	2507	5,622,610 – 5,622,703	+	5	94	93.38	-2.51	0.84	0.996614
1473	2R_DroMel_CAF1	5,623,039 – 5,623,131	- - - - - - - - -	2508	5,623,039 – 5,623,131	-	6	120	80.92	-1.68	0.61	0.563081
1474	2R_DroMel_CAF1	5,625,622 – 5,625,749	- - - - - - - - -	2509	5,625,622 – 5,625,712	+	5	105	87.25	-2.32	0.73	0.886664
1474	2R_DroMel_CAF1	5,625,622 – 5,625,749	- - - - - - - - -	2510	5,625,646 – 5,625,749	+	5	116	87.85	-1.89	0.82	0.912361
1475	2R_DroMel_CAF1	5,634,911 – 5,635,071	- - - - - - - - -	2511	5,634,911 – 5,635,031	-	5	120	95.67	-1.23	0.94	0.790364
				2512	5,634,951 – 5,635,071	+	5	120	87.16	-3.61	0.78	0.998258
				2513	5,634,951 – 5,635,071	-	5	120	87.16	-5.57	0.84	0.998830
1476	2R_DroMel_CAF1	5,635,275 – 5,635,395	- - - - - - - - -	2514	5,635,275 – 5,635,395	+	5	120	95.17	-1.65	0.86	0.922624
1477	2R_DroMel_CAF1	5,635,841 – 5,635,945	- - - - - - - - -	2515	5,635,841 – 5,635,945	-	5	120	84.05	-1.66	0.77	0.654209
1478	2R_DroMel_CAF1	5,636,274 – 5,636,387	- - - - - - - - -	2516	5,636,274 – 5,636,387	+	5	119	90.81	-1.55	0.90	0.930320
1479	2R_DroMel_CAF1	5,637,192 – 5,637,312	- - - - - - - - -	2517	5,637,192 – 5,637,312	+	5	120	90.85	-3.18	0.86	0.999788
1480	2R_DroMel_CAF1	5,637,856 – 5,637,975	- - - - - - - - -	2518	5,637,856 – 5,637,975	-	5	120	90.41	-1.26	0.87	0.578032
1481	2R_DroMel_CAF1	5,638,787 – 5,638,905	- - - - - - - - -	2519	5,638,787 – 5,638,905	+	5	120	96.13	-1.17	0.92	0.627107
1482	2R_DroMel_CAF1	5,638,941 – 5,639,061	- - - - - - - - -	2520	5,638,941 – 5,639,061	+	5	120	90.53	-1.41	0.89	0.809638
1483	2R_DroMel_CAF1	5,639,681 – 5,639,840	- - - - - - - - -	2521	5,639,681 – 5,639,800	-	5	120	93.80	-1.89	0.77	0.692023
1483	2R_DroMel_CAF1	5,639,681 – 5,639,840	- - - - - - - - -	2522	5,639,721 – 5,639,840	+	5	120	97.15	-1.98	0.84	0.935462
1484	2R_DroMel_CAF1	5,639,919 – 5,640,038	- - - - - - - - -	2523	5,639,919 – 5,640,038	+	5	120	91.31	-1.34	0.80	0.512663
1485	2R_DroMel_CAF1	5,640,078 – 5,640,198	- - - - - - - - -	2524	5,640,078 – 5,640,198	-	5	120	88.71	-1.90	0.72	0.654769
1486	2R_DroMel_CAF1	5,640,318 – 5,640,432	- - - - - - - - -	2525	5,640,318 – 5,640,432	-	5	120	89.08	-1.46	0.78	0.542024
1487	2R_DroMel_CAF1	5,642,448 – 5,642,559	- - - - - - - - -	2526	5,642,448 – 5,642,559	+	5	120	88.83	-1.64	0.86	0.878382
1488	2R_DroMel_CAF1	5,646,434 – 5,646,531	- - - - - - - - -	2527	5,646,434 – 5,646,531	+	5	97	93.92	-2.00	0.87	0.990477
1489	2R_DroMel_CAF1	5,653,746 – 5,653,846	- - - "knownCDS=Parent=FBtr0088330, FBtr0088331;Name=Or46a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33478-RA, FlyBase+Annotation+IDs:CG33478-RB" - - - - -	2528	5,653,746 – 5,653,846	-	6	104	82.12	-1.43	0.79	0.624587
1490	2R_DroMel_CAF1	5,658,832 – 5,658,923	- - - - - - - - -	2529	5,658,832 – 5,658,923	+	6	96	85.47	-2.66	0.87	0.967983
1491	2R_DroMel_CAF1	5,659,256 – 5,659,361	- - - - - - - - -	2530	5,659,256 – 5,659,361	-	6	114	82.42	-2.36	0.66	0.768977
1492	2R_DroMel_CAF1	5,660,764 – 5,660,870	- - - "knownCDS=Parent=FBtr0088371;Name=KCNQ-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33135-RA" - - - - -	2531	5,660,764 – 5,660,870	-	6	106	77.70	-1.17	0.65	0.517248
1493	2R_DroMel_CAF1	5,665,088 – 5,665,200	- - - "knownCDS=Parent=FBtr0088371, FBtr0088372;Name=KCNQ-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33135-RA, FlyBase+Annotation+IDs:CG33135-RB" - - - - -	2532	5,665,088 – 5,665,200	-	6	114	76.40	-1.51	0.62	0.751675
1494	2R_DroMel_CAF1	5,665,963 – 5,666,103	- - - "knownCDS=Parent=FBtr0088371, FBtr0088372;Name=KCNQ-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33135-RA, FlyBase+Annotation+IDs:CG33135-RB" - - - - -	2533	5,665,963 – 5,666,082	-	6	120	80.86	-1.61	0.71	0.746746
				2534	5,666,003 – 5,666,103	+	6	104	77.48	-1.60	0.81	0.932476
				2535	5,666,003 – 5,666,103	-	6	104	77.48	-1.95	0.66	0.938567
1495	2R_DroMel_CAF1	5,670,711 – 5,670,836	- - - - - - - - -	2536	5,670,711 – 5,670,801	+	4	103	72.04	-1.63	0.67	0.904450
				2537	5,670,711 – 5,670,801	-	4	103	72.04	-2.00	0.63	0.982975
				2538	5,670,746 – 5,670,836	-	4	106	67.69	-2.07	0.46	0.889143
1496	2R_DroMel_CAF1	5,671,287 – 5,671,382	- - - - - - - - -	2539	5,671,287 – 5,671,382	+	5	95	78.21	-1.60	0.71	0.764894
1497	2R_DroMel_CAF1	5,676,814 – 5,676,923	- - - - - - - - -	2540	5,676,814 – 5,676,923	+	5	111	88.10	-1.68	0.81	0.786215
1498	2R_DroMel_CAF1	5,681,322 – 5,681,431	- - - - - - - - -	2541	5,681,322 – 5,681,431	-	6	111	79.49	-2.22	0.58	0.864072
1499	2R_DroMel_CAF1	5,682,405 – 5,682,521	- - - - - - - - -	2542	5,682,405 – 5,682,521	-	5	120	73.05	-1.49	0.09	0.639265
1500	2R_DroMel_CAF1	5,685,695 – 5,685,785	- - - - - - - - -	2543	5,685,695 – 5,685,785	-	6	102	90.88	-1.43	0.89	0.747296
1501	2R_DroMel_CAF1	5,687,535 – 5,687,634	- - - - - - - - -	2544	5,687,535 – 5,687,634	-	6	104	71.61	-1.88	0.45	0.808577
1502	2R_DroMel_CAF1	5,698,105 – 5,698,204	- - - - - - - - -	2545	5,698,105 – 5,698,204	+	5	120	78.58	-1.97	0.58	0.808634
1502	2R_DroMel_CAF1	5,698,105 – 5,698,204	- - - - - - - - -	2546	5,698,105 – 5,698,204	-	5	120	78.58	-1.90	0.50	0.598436
1503	2R_DroMel_CAF1	5,701,712 – 5,701,812	- - - - - - - - -	2547	5,701,712 – 5,701,812	-	5	101	81.23	-2.44	0.27	0.697480
1504	2R_DroMel_CAF1	5,701,855 – 5,701,956	- - - - - - - - -	2548	5,701,855 – 5,701,956	+	5	106	91.17	-1.57	0.90	0.940299
1505	2R_DroMel_CAF1	5,704,184 – 5,704,275	- - - - - - - - -	2549	5,704,184 – 5,704,275	+	6	92	81.46	-2.18	0.72	0.860418
1506	2R_DroMel_CAF1	5,705,611 – 5,705,715	- - - - - - - - -	2550	5,705,611 – 5,705,715	+	6	118	78.09	-2.32	0.64	0.963297
1506	2R_DroMel_CAF1	5,705,611 – 5,705,715	- - - - - - - - -	2551	5,705,611 – 5,705,715	-	6	118	78.09	-1.76	0.61	0.815311
1507	2R_DroMel_CAF1	5,707,048 – 5,707,148	- - - - - - - - -	2552	5,707,048 – 5,707,148	-	6	107	77.64	-1.94	0.47	0.505603
1508	2R_DroMel_CAF1	5,707,779 – 5,707,876	- - - - - - - - -	2553	5,707,779 – 5,707,876	-	6	101	81.97	-3.52	0.51	0.899495
1509	2R_DroMel_CAF1	5,710,185 – 5,710,288	- - - - - - - - -	2554	5,710,185 – 5,710,288	+	6	108	80.50	-1.06	0.74	0.500000
1510	2R_DroMel_CAF1	5,720,211 – 5,720,331	- - - "knownCDS=Parent=FBtr0088366;Name=Hr46-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33183-RC" - - - - -	2555	5,720,211 – 5,720,331	-	6	120	92.39	-0.94	0.99	0.833788
1511	2R_DroMel_CAF1	5,728,151 – 5,728,243	- - - - - - - - -	2556	5,728,151 – 5,728,243	+	5	98	77.40	-2.07	0.45	0.820010
1512	2R_DroMel_CAF1	5,729,126 – 5,729,290	- - - - - - - - -	2557	5,729,126 – 5,729,235	+	4	109	94.09	-2.36	0.80	0.794792
				2558	5,729,126 – 5,729,235	-	4	109	94.09	-3.58	0.88	0.982467
				2559	5,729,195 – 5,729,290	-	4	111	73.23	-1.29	0.75	0.709671
1513	2R_DroMel_CAF1	5,731,720 – 5,731,822	- - - - - - - - -	2560	5,731,720 – 5,731,822	+	5	102	93.89	-1.40	0.88	0.831381
1514	2R_DroMel_CAF1	5,733,390 – 5,733,525	- - - - - - - - -	2561	5,733,390 – 5,733,496	-	6	114	76.57	-1.94	0.46	0.556371
1514	2R_DroMel_CAF1	5,733,390 – 5,733,525	- - - - - - - - -	2562	5,733,430 – 5,733,525	-	6	111	75.34	-2.20	0.33	0.517448
1515	2R_DroMel_CAF1	5,735,719 – 5,735,825	- - - - - - - - -	2563	5,735,719 – 5,735,825	+	6	108	82.27	-1.69	0.75	0.701017
1516	2R_DroMel_CAF1	5,746,571 – 5,746,671	- - - - - - - - -	2564	5,746,571 – 5,746,671	+	6	120	73.10	-2.25	0.54	0.982928
1517	2R_DroMel_CAF1	5,747,574 – 5,747,671	- - - - - - - - -	2565	5,747,574 – 5,747,671	-	6	102	77.58	-2.01	0.53	0.794785
1518	2R_DroMel_CAF1	5,753,463 – 5,753,568	- - - "knownCDS=Parent=FBtr0088333;Name=Hdc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3454-RA" - - - - -	2566	5,753,463 – 5,753,568	+	6	120	79.49	-1.68	0.75	0.872686
1519	2R_DroMel_CAF1	5,754,435 – 5,754,528	- - - - - - - - -	2567	5,754,435 – 5,754,528	+	6	102	82.78	-1.66	0.72	0.603128
1520	2R_DroMel_CAF1	5,757,983 – 5,758,077	- - - - - - - - -	2568	5,757,983 – 5,758,077	+	3	110	86.06	-2.17	0.73	0.677205
1520	2R_DroMel_CAF1	5,757,983 – 5,758,077	- - - - - - - - -	2569	5,757,983 – 5,758,077	-	3	110	86.06	-2.89	0.81	0.947305
1521	2R_DroMel_CAF1	5,759,059 – 5,759,158	- - - - - - - - -	2570	5,759,059 – 5,759,158	+	6	109	78.16	-1.76	0.58	0.738228
1522	2R_DroMel_CAF1	5,765,308 – 5,765,428	- - - "knownCDS=Parent=FBtr0088335;Name=CG12913-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12913-RA" - - - - -	2571	5,765,308 – 5,765,428	-	6	120	78.60	-2.09	0.52	0.755531
1523	2R_DroMel_CAF1	5,772,225 – 5,772,328	- - - - - - - - -	2572	5,772,225 – 5,772,328	+	5	103	96.12	-1.32	0.93	0.844277
1524	2R_DroMel_CAF1	5,776,623 – 5,776,848	- - - - - - - - -	2573	5,776,623 – 5,776,741	+	5	120	74.30	-2.73	0.33	0.998224
				2574	5,776,663 – 5,776,768	-	3	109	89.66	-2.27	0.77	0.642012
				2575	5,776,703 – 5,776,808	+	3	109	93.10	-2.20	0.94	0.920417
				2576	5,776,741 – 5,776,848	+	5	120	87.74	-1.85	0.74	0.738144
1525	2R_DroMel_CAF1	5,777,498 – 5,777,592	- - - - - - - - -	2577	5,777,498 – 5,777,592	+	5	102	93.42	-2.79	0.88	0.999673
1525	2R_DroMel_CAF1	5,777,498 – 5,777,592	- - - - - - - - -	2578	5,777,498 – 5,777,592	-	5	102	93.42	-2.33	0.85	0.995674
1526	2R_DroMel_CAF1	5,781,564 – 5,781,660	- - - - - - - - -	2579	5,781,564 – 5,781,660	+	5	97	90.25	-2.28	0.81	0.979901
1527	2R_DroMel_CAF1	5,784,467 – 5,784,582	- - - - - - - - -	2580	5,784,467 – 5,784,582	+	5	119	94.17	-1.33	0.89	0.802041
1528	2R_DroMel_CAF1	5,785,113 – 5,785,231	- - - - - - - - -	2581	5,785,113 – 5,785,231	+	5	120	91.09	-1.55	0.88	0.912643
1529	2R_DroMel_CAF1	5,786,317 – 5,786,417	- - - - - - - - -	2582	5,786,317 – 5,786,417	+	5	100	94.20	-1.64	0.93	0.988271
1530	2R_DroMel_CAF1	5,789,794 – 5,789,890	- - - - - - - - -	2583	5,789,794 – 5,789,890	+	6	98	79.90	-1.48	0.66	0.663873
1531	2R_DroMel_CAF1	5,791,973 – 5,792,076	- - - "knownCDS=Parent=FBtr0088341;Name=CAP-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18408-RA" - - - - -	2584	5,791,973 – 5,792,076	-	5	103	93.40	-1.23	0.86	0.575267
1532	2R_DroMel_CAF1	5,792,504 – 5,792,609	- - - "knownCDS=Parent=FBtr0088341;Name=CAP-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18408-RA" - - - - -	2585	5,792,504 – 5,792,609	-	6	110	78.41	-1.53	0.58	0.507098
1533	2R_DroMel_CAF1	5,793,633 – 5,793,728	- - - "knownCDS=Parent=FBtr0088341;Name=CAP-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18408-RA" - - - - -	2586	5,793,633 – 5,793,728	+	6	117	77.88	-2.21	0.74	0.969450
1533	2R_DroMel_CAF1	5,793,633 – 5,793,728		2587	5,793,633 – 5,793,728	-	6	117	77.88	-1.86	0.68	0.928558
1534	2R_DroMel_CAF1	5,803,010 – 5,803,106	- - - - - - - - -	2588	5,803,010 – 5,803,106	+	6	120	79.55	-1.25	0.77	0.712068
1535	2R_DroMel_CAF1	5,807,768 – 5,807,881	- - - "knownCDS=Parent=FBtr0088344;Name=CAP-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18408-RB" - - - - -	2589	5,807,768 – 5,807,881	-	6	118	74.97	-1.17	0.64	0.547655
1536	2R_DroMel_CAF1	5,811,343 – 5,811,457	- - - "knownCDS=Parent=FBtr0088344;Name=CAP-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18408-RB" - - - - -	2590	5,811,343 – 5,811,457	-	6	120	83.22	-1.99	0.77	0.744578
1537	2R_DroMel_CAF1	5,813,618 – 5,813,736	- - - "knownCDS=Parent=FBtr0088345;Name=CAP-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18408-RD" - - - - -	2591	5,813,618 – 5,813,736	-	6	120	79.78	-2.01	0.51	0.535959
1538	2R_DroMel_CAF1	5,815,283 – 5,815,392	- - - - - - - - -	2592	5,815,283 – 5,815,392	-	5	112	91.02	-3.19	0.82	0.998787
1539	2R_DroMel_CAF1	5,817,803 – 5,817,922	- - "RNAmicro=f:5817803_t:5817922_strand:+_p:0.989029" - - - - - -	2593	5,817,803 – 5,817,922	-	3	120	67.69	-3.97	0.65	1.000000
1540	2R_DroMel_CAF1	5,820,012 – 5,820,120	- - - "knownCDS=Parent=FBtr0088360;Name=JhI-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3298-RB" - - - - -	2594	5,820,012 – 5,820,120	+	6	108	75.86	-1.46	0.64	0.798336
1540	2R_DroMel_CAF1	5,820,012 – 5,820,120		2595	5,820,012 – 5,820,120	-	6	108	75.86	-1.40	0.67	0.829198
1541	2R_DroMel_CAF1	5,820,380 – 5,820,488	- - - "knownCDS=Parent=FBtr0088360;Name=JhI-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3298-RB" - - - - -	2596	5,820,380 – 5,820,488	+	6	108	82.96	-1.93	0.72	0.679908
1542	2R_DroMel_CAF1	5,824,249 – 5,824,363	- - - - - - - - -	2597	5,824,249 – 5,824,363	+	6	114	90.29	-2.30	0.83	0.847208
1543	2R_DroMel_CAF1	5,837,114 – 5,837,234	- - - "knownCDS=Parent=FBtr0088358;Name=CG12904-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12904-RA" - - - - -	2598	5,837,114 – 5,837,234	-	6	120	84.66	-1.76	0.82	0.667155
1544	2R_DroMel_CAF1	5,838,888 – 5,838,979	- - - - - - - - -	2599	5,838,888 – 5,838,979	+	6	91	82.18	-1.85	0.70	0.703390
1544	2R_DroMel_CAF1	5,838,888 – 5,838,979	- - - - - - - - -	2600	5,838,888 – 5,838,979	-	6	91	82.18	-1.76	0.65	0.583814
1545	2R_DroMel_CAF1	5,842,648 – 5,842,738	- - - "knownCDS=Parent=FBtr0088358;Name=CG12904-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12904-RA" - - - - -	2601	5,842,648 – 5,842,738	-	6	102	78.72	-1.38	0.65	0.642330
1546	2R_DroMel_CAF1	5,850,007 – 5,850,105	- - - - - - - - -	2602	5,850,007 – 5,850,105	-	5	98	92.61	-1.83	0.76	0.668584
1547	2R_DroMel_CAF1	5,851,365 – 5,851,479	- - - - - - - - -	2603	5,851,365 – 5,851,479	-	6	120	90.29	-1.70	0.88	0.848783
1548	2R_DroMel_CAF1	5,863,954 – 5,864,059	- - - - - - - - -	2604	5,863,954 – 5,864,059	-	3	105	73.95	-1.85	0.60	0.902555
1549	2R_DroMel_CAF1	5,877,420 – 5,877,518	- - - - - - - - -	2605	5,877,420 – 5,877,518	-	5	98	96.22	-1.76	0.89	0.973934
1550	2R_DroMel_CAF1	5,877,983 – 5,878,077	- - - - - - - - -	2606	5,877,983 – 5,878,077	+	6	110	79.46	-2.54	0.47	0.798861
1551	2R_DroMel_CAF1	5,879,408 – 5,879,507	- - - - - - - - -	2607	5,879,408 – 5,879,507	+	6	120	79.69	-2.11	0.74	0.929271
1552	2R_DroMel_CAF1	5,885,061 – 5,885,151	- - - - - - - - -	2608	5,885,061 – 5,885,151	+	5	90	79.19	-2.35	0.63	0.966794
1553	2R_DroMel_CAF1	5,888,257 – 5,888,365	- - - - - - - - -	2609	5,888,257 – 5,888,365	-	3	119	88.24	-1.93	0.77	0.517391
1554	2R_DroMel_CAF1	5,888,682 – 5,888,837	- - - - - - - - -	2610	5,888,682 – 5,888,797	+	3	118	88.42	-2.14	0.76	0.604748
1554	2R_DroMel_CAF1	5,888,682 – 5,888,837	- - - - - - - - -	2611	5,888,721 – 5,888,837	+	3	118	87.29	-2.53	0.71	0.742244
1555	2R_DroMel_CAF1	5,893,259 – 5,893,377	- - - - - - - - -	2612	5,893,259 – 5,893,377	-	5	120	95.88	-1.85	0.92	0.993793
1556	2R_DroMel_CAF1	5,893,736 – 5,893,826	- - - - - - - - -	2613	5,893,736 – 5,893,826	-	5	91	90.44	-2.20	0.81	0.974084
1557	2R_DroMel_CAF1	5,893,926 – 5,894,078	- - - - - - - - -	2614	5,893,926 – 5,894,045	-	5	119	97.14	-1.58	0.88	0.860978
1557	2R_DroMel_CAF1	5,893,926 – 5,894,078	- - - - - - - - -	2615	5,893,965 – 5,894,078	-	5	113	95.93	-1.51	0.91	0.940245
1558	2R_DroMel_CAF1	5,894,543 – 5,894,663	- - - - - - - - -	2616	5,894,543 – 5,894,663	+	5	120	95.58	-1.70	0.80	0.652928
1559	2R_DroMel_CAF1	5,894,968 – 5,895,058	- - - - - - - - -	2617	5,894,968 – 5,895,058	+	5	90	95.89	-2.10	0.92	0.998106
1559	2R_DroMel_CAF1	5,894,968 – 5,895,058	- - - - - - - - -	2618	5,894,968 – 5,895,058	-	5	90	95.89	-1.28	0.86	0.550315
1560	2R_DroMel_CAF1	5,895,718 – 5,895,824	- - - - - - - - -	2619	5,895,718 – 5,895,824	-	6	120	85.96	-2.08	0.86	0.873557
1561	2R_DroMel_CAF1	5,897,098 – 5,897,213	- - - - - - - - -	2620	5,897,098 – 5,897,213	-	6	120	82.91	-1.58	0.71	0.544390
1562	2R_DroMel_CAF1	5,898,823 – 5,898,913	- - - - - - - - -	2621	5,898,823 – 5,898,913	+	4	94	91.40	-1.57	0.81	0.611294
1563	2R_DroMel_CAF1	5,902,704 – 5,902,804	- - - - - - - - -	2622	5,902,704 – 5,902,804	-	6	120	79.25	-2.22	0.72	0.946123
1564	2R_DroMel_CAF1	5,908,001 – 5,908,104	- - - - - - - - -	2623	5,908,001 – 5,908,104	+	5	113	89.65	-1.83	0.78	0.839841
1565	2R_DroMel_CAF1	5,908,724 – 5,908,824	- - - - - - - - -	2624	5,908,724 – 5,908,824	+	6	120	79.44	-1.49	0.60	0.519876
1566	2R_DroMel_CAF1	5,908,856 – 5,908,957	- - - - - - - - -	2625	5,908,856 – 5,908,957	+	6	120	83.29	-2.26	0.68	0.661350
1566	2R_DroMel_CAF1	5,908,856 – 5,908,957	- - - - - - - - -	2626	5,908,856 – 5,908,957	-	6	120	83.29	-2.41	0.63	0.614812
1567	2R_DroMel_CAF1	5,912,799 – 5,912,911	- - - - - - - - -	2627	5,912,799 – 5,912,911	-	4	120	87.93	-1.61	0.71	0.594898
1568	2R_DroMel_CAF1	5,913,049 – 5,913,233	- - - - - - - - -	2628	5,913,049 – 5,913,158	-	4	120	78.37	-1.93	0.57	0.615038
1568	2R_DroMel_CAF1	5,913,049 – 5,913,233	- - - - - - - - -	2629	5,913,119 – 5,913,233	+	4	120	88.36	-1.85	0.68	0.596410
1569	2R_DroMel_CAF1	5,918,745 – 5,918,856	- - - - - - - - -	2630	5,918,745 – 5,918,856	-	5	117	93.77	-1.66	0.78	0.618086
1570	2R_DroMel_CAF1	5,921,888 – 5,922,008	- - - "knownCDS=Parent=FBtr0088319;Name=CG33476-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33476-RA" - - - - -	2631	5,921,888 – 5,922,008	+	5	120	89.67	-1.69	0.81	0.828657
1571	2R_DroMel_CAF1	5,924,378 – 5,924,532	- - - "knownCDS=Parent=FBtr0088317;Name=CG12897-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12897-RA" - - - - -	2632	5,924,378 – 5,924,492	+	5	114	98.60	-1.84	0.99	0.992758
				2633	5,924,378 – 5,924,492	-	5	114	98.60	-1.16	0.98	0.551267
				2634	5,924,412 – 5,924,532	+	6	120	97.22	-1.16	0.96	0.941998
				2635	5,924,412 – 5,924,532	-	6	120	97.22	-0.82	1.00	0.858540
1572	2R_DroMel_CAF1	5,927,636 – 5,927,744	- - - - - - - - -	2636	5,927,636 – 5,927,744	-	5	108	91.94	-1.56	0.80	0.699175
1573	2R_DroMel_CAF1	5,928,197 – 5,928,314	- - - - - - - - -	2637	5,928,197 – 5,928,314	-	5	120	93.06	-2.24	0.93	0.999582
1574	2R_DroMel_CAF1	5,932,457 – 5,932,573	- - - - - - - - -	2638	5,932,457 – 5,932,573	+	3	120	73.03	-1.62	0.78	0.990843
1575	2R_DroMel_CAF1	5,932,613 – 5,932,733	- - - "knownCDS=Parent=FBtr0088316;Name=CG11825-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11825-RA" - - - - -	2639	5,932,613 – 5,932,733	+	3	120	95.56	-1.80	0.94	0.713200
1576	2R_DroMel_CAF1	5,933,158 – 5,933,248	- - - - - - - - -	2640	5,933,158 – 5,933,248	+	4	108	61.78	-1.69	0.45	0.744307
1576	2R_DroMel_CAF1	5,933,158 – 5,933,248	- - - - - - - - -	2641	5,933,158 – 5,933,248	-	4	108	61.78	-1.78	0.41	0.522106
1577	2R_DroMel_CAF1	5,934,107 – 5,934,215	- - - "knownCDS=Parent=FBtr0088260;Name=CG33474-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33474-RA" - - - - -	2642	5,934,107 – 5,934,215	-	3	120	80.46	-1.51	0.70	0.528511
1578	2R_DroMel_CAF1	5,939,913 – 5,940,006	- - - - - - - - -	2643	5,939,913 – 5,940,006	+	4	93	87.25	-3.56	0.90	0.998221
1578	2R_DroMel_CAF1	5,939,913 – 5,940,006	- - - - - - - - -	2644	5,939,913 – 5,940,006	-	4	93	87.25	-2.17	0.70	0.810758
1579	2R_DroMel_CAF1	5,940,086 – 5,940,181	- - - - - - - - -	2645	5,940,086 – 5,940,181	+	5	120	71.33	-2.26	0.42	0.984717
1580	2R_DroMel_CAF1	5,941,395 – 5,941,555	- - - - - - - - -	2646	5,941,395 – 5,941,515	-	5	120	77.91	-2.15	0.48	0.871190
1580	2R_DroMel_CAF1	5,941,395 – 5,941,555	- - - - - - - - -	2647	5,941,435 – 5,941,555	+	5	120	82.38	-2.35	0.62	0.885783
1581	2R_DroMel_CAF1	5,941,912 – 5,942,147	- - - - - - - - -	2648	5,941,912 – 5,942,032	+	4	120	95.69	-2.77	0.91	0.974568
				2649	5,941,952 – 5,942,072	+	4	120	98.75	-4.51	1.00	0.904051
				2650	5,941,952 – 5,942,072	-	4	120	98.75	-1.73	1.00	0.631220
				2651	5,942,032 – 5,942,147	-	4	120	93.58	-1.67	0.97	0.886014
1582	2R_DroMel_CAF1	5,942,187 – 5,942,291	- - - - - - - - -	2652	5,942,187 – 5,942,291	+	5	120	83.25	-1.94	0.86	0.909407
1583	2R_DroMel_CAF1	5,942,565 – 5,942,756	- - - "knownCDS=Parent=FBtr0088263;Name=micr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11763-RA" - - - - -	2653	5,942,565 – 5,942,682	-	4	117	96.58	-2.33	0.95	0.958646
1583	2R_DroMel_CAF1	5,942,565 – 5,942,756		2654	5,942,642 – 5,942,756	-	3	117	91.28	-1.97	1.00	0.963965
1584	2R_DroMel_CAF1	5,943,073 – 5,943,193	- - - "knownCDS=Parent=FBtr0088263;Name=micr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11763-RA" - - - - -	2655	5,943,073 – 5,943,193	-	5	120	96.42	-1.08	0.96	0.561821
1585	2R_DroMel_CAF1	5,944,321 – 5,944,507	- - - - - - - - -	2656	5,944,321 – 5,944,439	+	5	120	91.44	-1.37	0.80	0.510262
				2657	5,944,359 – 5,944,477	+	5	120	94.95	-3.33	0.98	0.999993
				2658	5,944,359 – 5,944,477	-	5	120	94.95	-2.19	0.85	0.990527
				2659	5,944,399 – 5,944,507	+	5	120	85.54	-2.12	0.86	0.969300
				2660	5,944,399 – 5,944,507	-	5	120	85.54	-1.71	0.85	0.804067
1586	2R_DroMel_CAF1	5,950,040 – 5,950,134	- - - - - - - - -	2661	5,950,040 – 5,950,134	+	5	102	92.46	-2.82	0.76	0.966408
1587	2R_DroMel_CAF1	5,951,963 – 5,952,108	- - - - - - - - -	2662	5,951,963 – 5,952,057	+	6	112	72.08	-1.97	0.38	0.722378
				2663	5,951,982 – 5,952,090	+	6	120	74.66	-2.34	0.38	0.882719
				2664	5,952,018 – 5,952,108	+	5	90	92.22	-2.17	0.78	0.919135
				2665	5,952,018 – 5,952,108	-	5	90	92.22	-1.68	0.94	0.989510
1588	2R_DroMel_CAF1	5,954,981 – 5,955,076	- - - - - - - - -	2666	5,954,981 – 5,955,076	+	5	95	80.11	-2.28	0.70	0.963583
1589	2R_DroMel_CAF1	5,957,364 – 5,957,574	- - - - - - - - -	2667	5,957,364 – 5,957,472	+	6	111	80.33	-1.12	0.70	0.500000
1589	2R_DroMel_CAF1	5,957,364 – 5,957,574	- - - - - - - - -	2668	5,957,472 – 5,957,574	+	6	106	79.14	-2.02	0.68	0.917496
1590	2R_DroMel_CAF1	5,959,300 – 5,959,450	- - - - - - - - -	2669	5,959,300 – 5,959,420	+	5	120	93.17	-2.13	0.73	0.602955
				2670	5,959,300 – 5,959,420	-	5	120	93.17	-2.31	0.83	0.991771
				2671	5,959,340 – 5,959,450	-	5	111	95.65	-1.68	0.90	0.970102
1591	2R_DroMel_CAF1	5,959,588 – 5,959,681	- - - - - - - - -	2672	5,959,588 – 5,959,681	+	5	94	83.70	-1.54	0.77	0.549282
1592	2R_DroMel_CAF1	5,962,127 – 5,962,220	- - - - - - - - -	2673	5,962,127 – 5,962,220	-	4	118	82.13	-1.61	0.78	0.663668
1593	2R_DroMel_CAF1	5,962,245 – 5,962,355	- - - "knownCDS=Parent=FBtr0088311, FBtr0088312, FBtr0088313;Name=Cyp49a1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18377-RA, FlyBase+Annotation+IDs:CG18377-RC, FlyBase+Annotation+IDs:CG18377-RD" - - - - -	2674	5,962,245 – 5,962,355	-	6	120	77.33	-0.86	0.73	0.516564
1594	2R_DroMel_CAF1	5,963,951 – 5,964,052	- - - - - - - - -	2675	5,963,951 – 5,964,052	+	6	105	78.50	-1.35	0.75	0.812605
1594	2R_DroMel_CAF1	5,963,951 – 5,964,052	- - - - - - - - -	2676	5,963,951 – 5,964,052	-	6	105	78.50	-1.41	0.82	0.859204
1595	2R_DroMel_CAF1	5,970,276 – 5,970,380	- - - - - - - - -	2677	5,970,276 – 5,970,380	-	6	120	73.15	-1.73	0.51	0.747670
1596	2R_DroMel_CAF1	5,978,917 – 5,979,021	- - - "knownCDS=Parent=FBtr0088310;Name=Caf1-105-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12892-RA" - - - - -	2678	5,978,917 – 5,979,021	-	6	114	81.12	-1.66	0.62	0.578779
1597	2R_DroMel_CAF1	5,983,804 – 5,983,915	- - - "knownCDS=Parent=FBtr0088307, FBtr0088308;Name=CPTI-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12891-RA, FlyBase+Annotation+IDs:CG12891-RB" - - - - -	2679	5,983,804 – 5,983,915	-	6	119	78.95	-1.92	0.56	0.730830
1598	2R_DroMel_CAF1	5,989,014 – 5,989,157	- - - - - - - - -	2680	5,989,014 – 5,989,117	-	5	114	75.72	-1.21	0.75	0.704280
1598	2R_DroMel_CAF1	5,989,014 – 5,989,157	- - - - - - - - -	2681	5,989,047 – 5,989,157	-	5	120	78.12	-1.92	0.69	0.918076
1599	2R_DroMel_CAF1	5,992,092 – 5,992,189	- - - - - - - - -	2682	5,992,092 – 5,992,189	+	6	104	80.94	-1.60	0.74	0.758954
1600	2R_DroMel_CAF1	5,993,138 – 5,993,231	- - - - - - - - -	2683	5,993,138 – 5,993,231	-	6	99	75.97	-1.28	0.69	0.801641
1601	2R_DroMel_CAF1	5,995,637 – 5,995,756	- - - "knownCDS=Parent=FBtr0089347, FBtr0089357;Name=lola-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12052-RG, FlyBase+Annotation+IDs:CG12052-RR" - - - - -	2684	5,995,637 – 5,995,756	-	6	119	87.96	-1.88	0.89	0.898711
1602	2R_DroMel_CAF1	5,999,913 – 6,000,020	- - - "knownCDS=Parent=FBtr0089365;Name=lola-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12052-RX" - - - - -	2685	5,999,913 – 6,000,020	+	6	117	74.85	-1.99	0.40	0.582889
1603	2R_DroMel_CAF1	6,003,996 – 6,004,116	- - - "knownCDS=Parent=FBtr0089361;Name=lola-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12052-RO" - - - - -	2686	6,003,996 – 6,004,116	-	6	120	83.72	-2.10	0.73	0.661203
1604	2R_DroMel_CAF1	6,007,068 – 6,007,173	- - - - - - - - -	2687	6,007,068 – 6,007,173	-	6	108	93.00	-1.56	0.85	0.547023
1605	2R_DroMel_CAF1	6,023,171 – 6,023,279	- - - - - - - - -	2688	6,023,171 – 6,023,279	-	6	117	82.16	-1.29	0.77	0.534364
1606	2R_DroMel_CAF1	6,026,148 – 6,026,284	- - "RNAmicro=f:6026178_t:6026290_strand:+_p:0.901231" - - - - - -	2689	6,026,148 – 6,026,257	+	5	109	92.12	-1.54	0.79	0.663688
				2690	6,026,148 – 6,026,257	-	5	109	92.12	-2.28	0.93	0.999587
				2691	6,026,178 – 6,026,284	+	5	113	89.74	-1.38	0.84	0.635353
				2692	6,026,178 – 6,026,284	-	5	113	89.74	-3.01	0.94	0.999962
1607	2R_DroMel_CAF1	6,029,723 – 6,029,855	- - - "knownCDS=Parent=FBtr0089353;Name=lola-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12052-RK" - - - - -	2693	6,029,723 – 6,029,815	-	6	96	82.24	-2.41	0.70	0.828952
1607	2R_DroMel_CAF1	6,029,723 – 6,029,855		2694	6,029,735 – 6,029,855	-	6	120	80.93	-1.92	0.58	0.589488
1608	2R_DroMel_CAF1	6,030,774 – 6,030,869	- - - - - - - - -	2695	6,030,774 – 6,030,869	+	6	102	67.10	-1.85	0.34	0.649657
1608	2R_DroMel_CAF1	6,030,774 – 6,030,869	- - - - - - - - -	2696	6,030,774 – 6,030,869	-	6	102	67.10	-2.42	0.41	0.988650
1609	2R_DroMel_CAF1	6,034,676 – 6,034,784	- - - "knownCDS=Parent=FBtr0089358;Name=lola-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12052-RS" - - - - -	2697	6,034,676 – 6,034,784	+	6	114	83.64	-2.55	0.69	0.723048
1610	2R_DroMel_CAF1	6,041,570 – 6,041,671	- - - - - - - - -	2698	6,041,570 – 6,041,671	-	6	106	79.69	-2.57	0.71	0.956010
1611	2R_DroMel_CAF1	6,043,963 – 6,044,061	- - - - - - - - -	2699	6,043,963 – 6,044,061	-	6	112	77.77	-1.31	0.73	0.807069
1612	2R_DroMel_CAF1	6,044,268 – 6,044,363	- - - "knownCDS=Parent=FBtr0100286;Name=lola-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12052-RZ" - - - - -	2700	6,044,268 – 6,044,363	-	6	95	85.61	-1.85	0.81	0.639580
1613	2R_DroMel_CAF1	6,046,998 – 6,047,092	- - - - - - - - -	2701	6,046,998 – 6,047,092	+	5	106	84.70	-2.56	0.76	0.975629
1613	2R_DroMel_CAF1	6,046,998 – 6,047,092	- - - - - - - - -	2702	6,046,998 – 6,047,092	-	5	106	84.70	-3.20	0.80	0.997887
1614	2R_DroMel_CAF1	6,048,756 – 6,048,863	- - - - - - - - -	2703	6,048,756 – 6,048,863	-	6	120	75.50	-0.60	0.89	0.614578
1615	2R_DroMel_CAF1	6,048,929 – 6,049,091	- - - - - - - - -	2704	6,048,929 – 6,049,024	-	6	105	79.51	-1.12	0.88	0.632332
1615	2R_DroMel_CAF1	6,048,929 – 6,049,091	- - - - - - - - -	2705	6,048,993 – 6,049,091	-	6	107	80.28	-1.93	0.67	0.842309
1616	2R_DroMel_CAF1	6,058,583 – 6,058,734	- - - - - - - - -	2706	6,058,583 – 6,058,703	+	5	120	79.74	-2.50	0.61	0.975595
				2707	6,058,583 – 6,058,703	-	5	120	79.74	-2.08	0.63	0.882842
				2708	6,058,623 – 6,058,734	+	5	120	80.64	-2.29	0.69	0.956747
1617	2R_DroMel_CAF1	6,058,845 – 6,058,942	- - - - - - - - -	2709	6,058,845 – 6,058,942	+	5	106	91.65	-1.88	0.95	0.997591
1617	2R_DroMel_CAF1	6,058,845 – 6,058,942	- - - - - - - - -	2710	6,058,845 – 6,058,942	-	5	106	91.65	-1.45	0.88	0.871355
1618	2R_DroMel_CAF1	6,063,169 – 6,063,266	- - - - - - - - -	2711	6,063,169 – 6,063,266	-	6	113	77.83	-1.50	0.61	0.642548
1619	2R_DroMel_CAF1	6,072,377 – 6,072,519	- - - - - - - - -	2712	6,072,377 – 6,072,486	-	3	110	82.07	-1.73	0.68	0.580179
1619	2R_DroMel_CAF1	6,072,377 – 6,072,519	- - - - - - - - -	2713	6,072,409 – 6,072,519	-	5	111	89.10	-1.83	0.78	0.818034
1620	2R_DroMel_CAF1	6,076,365 – 6,076,458	- - - - - - - - -	2714	6,076,365 – 6,076,458	-	6	106	77.59	-1.65	0.70	0.906178
1621	2R_DroMel_CAF1	6,085,502 – 6,085,599	- - - - - - - - -	2715	6,085,502 – 6,085,599	+	3	98	79.06	-1.50	0.85	0.899330
1622	2R_DroMel_CAF1	6,087,014 – 6,087,104	- - - - - - - - -	2716	6,087,014 – 6,087,104	+	6	90	85.46	-1.56	0.92	0.807557
1623	2R_DroMel_CAF1	6,090,497 – 6,090,588	- - - - - - - - -	2717	6,090,497 – 6,090,588	-	6	107	80.57	-1.16	0.70	0.500000
1624	2R_DroMel_CAF1	6,090,974 – 6,091,074	- - - - - - - - -	2718	6,090,974 – 6,091,074	-	5	102	94.64	-1.38	0.85	0.696773
1625	2R_DroMel_CAF1	6,092,213 – 6,092,312	- - - - - - - - -	2719	6,092,213 – 6,092,312	+	4	102	93.24	-2.51	0.87	0.971255
1625	2R_DroMel_CAF1	6,092,213 – 6,092,312	- - - - - - - - -	2720	6,092,213 – 6,092,312	-	4	102	93.24	-3.93	0.77	0.776405
1626	2R_DroMel_CAF1	6,094,385 – 6,094,484	- - - - - - - - -	2721	6,094,385 – 6,094,484	+	5	105	88.82	-1.93	0.78	0.858985
1626	2R_DroMel_CAF1	6,094,385 – 6,094,484	- - - - - - - - -	2722	6,094,385 – 6,094,484	-	5	105	88.82	-1.29	0.86	0.506427
1627	2R_DroMel_CAF1	6,095,681 – 6,095,805	- - - - - - - - -	2723	6,095,681 – 6,095,784	+	5	116	81.77	-2.45	0.45	0.743042
1627	2R_DroMel_CAF1	6,095,681 – 6,095,805	- - - - - - - - -	2724	6,095,714 – 6,095,805	-	5	101	78.39	-1.45	0.01	0.612514
1628	2R_DroMel_CAF1	6,107,368 – 6,107,467	- - - - - - - - -	2725	6,107,368 – 6,107,467	+	6	106	75.60	-1.12	0.65	0.542555
1629	2R_DroMel_CAF1	6,114,792 – 6,114,892	- - - - - - - - -	2726	6,114,792 – 6,114,892	+	5	102	93.54	-1.55	0.85	0.860280
1629	2R_DroMel_CAF1	6,114,792 – 6,114,892	- - - - - - - - -	2727	6,114,792 – 6,114,892	-	5	102	93.54	-2.55	0.96	0.999953
1630	2R_DroMel_CAF1	6,124,706 – 6,124,854	- - - "knownCDS=Parent=FBtr0088280, FBtr0088281, FBtr0088278, FBtr0088279, FBtr0088277, FBtr0100605, FBtr0100606;Name=psq-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2368-RG, FlyBase+Annotation+IDs:CG2368-RH, FlyBase+Annotation+IDs:CG2368-RD, FlyBase+Annotation+IDs:CG2368-RF, FlyBase+Annotation+IDs:CG2368-RE, FlyBase+Annotation+IDs:CG2368-RI, FlyBase+Annotation+IDs:CG2368-RJ" - - - - -	2728	6,124,706 – 6,124,814	-	6	108	97.28	-2.17	0.94	0.999174
1630	2R_DroMel_CAF1	6,124,706 – 6,124,854		2729	6,124,734 – 6,124,854	-	6	120	97.44	-2.44	0.93	0.999234
1631	2R_DroMel_CAF1	6,126,308 – 6,126,435	- - - "knownCDS=Parent=FBtr0100607;Name=psq-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2368-RK" - - - - -	2730	6,126,308 – 6,126,398	-	6	106	83.63	-1.34	0.89	0.573904
1631	2R_DroMel_CAF1	6,126,308 – 6,126,435		2731	6,126,326 – 6,126,435	-	6	120	82.04	-2.18	0.72	0.819966
1632	2R_DroMel_CAF1	6,132,517 – 6,132,613	- - - - - - - - -	2732	6,132,517 – 6,132,613	+	6	113	79.81	-1.84	0.79	0.901599
1632	2R_DroMel_CAF1	6,132,517 – 6,132,613	- - - - - - - - -	2733	6,132,517 – 6,132,613	-	6	113	79.81	-1.40	0.71	0.710588
1633	2R_DroMel_CAF1	6,160,127 – 6,160,225	- - - - - - - - -	2734	6,160,127 – 6,160,225	-	6	104	73.21	-0.63	0.77	0.624106
1634	2R_DroMel_CAF1	6,163,361 – 6,163,454	- - - "knownCDS=Parent=FBtr0088212;Name=CG11887-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11887-RA" - - - - -	2735	6,163,361 – 6,163,454	+	6	110	80.11	-2.77	0.71	0.956851
1634	2R_DroMel_CAF1	6,163,361 – 6,163,454		2736	6,163,361 – 6,163,454	-	6	110	80.11	-1.98	0.82	0.918394
1635	2R_DroMel_CAF1	6,166,071 – 6,166,162	- - - - - - - - -	2737	6,166,071 – 6,166,162	+	6	91	90.86	-2.17	0.96	0.998627
1636	2R_DroMel_CAF1	6,170,731 – 6,170,835	- - - - - - - - -	2738	6,170,731 – 6,170,835	+	6	110	81.21	-2.55	0.52	0.721246
1636	2R_DroMel_CAF1	6,170,731 – 6,170,835	- - - - - - - - -	2739	6,170,731 – 6,170,835	-	6	110	81.21	-2.22	0.55	0.623343
1637	2R_DroMel_CAF1	6,183,851 – 6,183,949	- - - - - - - - -	2740	6,183,851 – 6,183,949	+	5	98	94.48	-1.67	0.82	0.838964
1637	2R_DroMel_CAF1	6,183,851 – 6,183,949	- - - - - - - - -	2741	6,183,851 – 6,183,949	-	5	98	94.48	-1.86	0.85	0.968893
1638	2R_DroMel_CAF1	6,188,067 – 6,188,161	- - "RNAmicro=f:6188067_t:6188163_strand:-_p:0.631202" - - - - - -	2742	6,188,067 – 6,188,161	+	6	97	83.44	-2.23	0.77	0.796561
1638	2R_DroMel_CAF1	6,188,067 – 6,188,161		2743	6,188,067 – 6,188,161	-	6	97	83.44	-2.42	0.68	0.686118
1639	2R_DroMel_CAF1	6,189,294 – 6,189,393	- - - - - - - - -	2744	6,189,294 – 6,189,393	-	5	100	96.98	-1.45	0.90	0.856069
1640	2R_DroMel_CAF1	6,193,157 – 6,193,256	- - - - - - - - -	2745	6,193,157 – 6,193,256	-	6	99	79.81	-2.12	0.69	0.912634
1641	2R_DroMel_CAF1	6,193,823 – 6,193,922	- - - - - - - - -	2746	6,193,823 – 6,193,922	-	3	104	88.46	-2.23	0.86	0.852605
1642	2R_DroMel_CAF1	6,198,155 – 6,198,248	- - - - - - - - -	2747	6,198,155 – 6,198,248	-	5	93	85.90	-2.02	0.77	0.868318
1643	2R_DroMel_CAF1	6,200,956 – 6,201,047	- - - - - - - - -	2748	6,200,956 – 6,201,047	-	6	97	68.66	-2.31	0.19	0.613794
1644	2R_DroMel_CAF1	6,202,154 – 6,202,255	- - - - - - - - -	2749	6,202,154 – 6,202,255	-	6	101	94.06	-1.38	0.86	0.521551
1645	2R_DroMel_CAF1	6,204,689 – 6,204,786	- - - - - - - - -	2750	6,204,689 – 6,204,786	+	5	103	87.83	-1.51	0.80	0.622039
1646	2R_DroMel_CAF1	6,211,180 – 6,211,272	- - - - - - - - -	2751	6,211,180 – 6,211,272	-	6	92	81.09	-1.37	0.80	0.671026
1647	2R_DroMel_CAF1	6,218,658 – 6,218,765	- - - - - - - - -	2752	6,218,658 – 6,218,765	-	6	107	86.60	-3.09	0.72	0.624996
1648	2R_DroMel_CAF1	6,220,605 – 6,220,699	- - - - - - - - -	2753	6,220,605 – 6,220,699	+	6	100	70.63	-2.15	0.44	0.959152
1648	2R_DroMel_CAF1	6,220,605 – 6,220,699	- - - - - - - - -	2754	6,220,605 – 6,220,699	-	6	100	70.63	-1.45	0.59	0.805378
1649	2R_DroMel_CAF1	6,224,292 – 6,224,412	- - - "knownCDS=Parent=FBtr0088214;Name=stan-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11895-RA" - - - - -	2755	6,224,292 – 6,224,412	+	6	120	80.56	-1.40	0.67	0.599971
1650	2R_DroMel_CAF1	6,235,570 – 6,235,663	- - - - - - - - -	2756	6,235,570 – 6,235,663	+	5	105	74.60	-1.81	0.34	0.677885
1650	2R_DroMel_CAF1	6,235,570 – 6,235,663	- - - - - - - - -	2757	6,235,570 – 6,235,663	-	5	105	74.60	-1.96	0.05	0.934496
1651	2R_DroMel_CAF1	6,240,451 – 6,240,549	- - - - - - - - -	2758	6,240,451 – 6,240,549	+	5	98	92.86	-1.51	0.85	0.839172
1651	2R_DroMel_CAF1	6,240,451 – 6,240,549	- - - - - - - - -	2759	6,240,451 – 6,240,549	-	5	98	92.86	-1.36	0.96	0.938236
1652	2R_DroMel_CAF1	6,247,249 – 6,247,341	- - - - - - - - -	2760	6,247,249 – 6,247,341	-	5	100	79.08	-2.07	0.33	0.655365
1653	2R_DroMel_CAF1	6,248,142 – 6,248,233	- - - - - - - - -	2761	6,248,142 – 6,248,233	-	6	94	74.19	-2.30	0.43	0.939516
1654	2R_DroMel_CAF1	6,252,933 – 6,253,030	- - - - - - - - -	2762	6,252,933 – 6,253,030	+	6	97	81.62	-1.53	0.65	0.549609
1655	2R_DroMel_CAF1	6,257,123 – 6,257,228	- - - "knownCDS=Parent=FBtr0088254;Name=CG33144-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33144-RA" - - - - -	2763	6,257,123 – 6,257,228	-	6	116	79.09	-1.13	0.73	0.627659
1656	2R_DroMel_CAF1	6,259,087 – 6,259,184	- - - - - - - - -	2764	6,259,087 – 6,259,184	-	6	110	81.24	-1.60	0.62	0.530532
1657	2R_DroMel_CAF1	6,263,741 – 6,263,891	- - - - - - - - -	2765	6,263,741 – 6,263,859	-	5	118	84.41	-2.09	0.70	0.817909
1657	2R_DroMel_CAF1	6,263,741 – 6,263,891	- - - - - - - - -	2766	6,263,779 – 6,263,891	-	5	120	82.12	-2.78	0.66	0.980784
1658	2R_DroMel_CAF1	6,264,515 – 6,264,697	- - - - - - - - -	2767	6,264,515 – 6,264,632	+	5	117	94.62	-2.47	0.83	0.992751
				2768	6,264,515 – 6,264,632	-	5	117	94.62	-2.47	0.93	0.999844
				2769	6,264,555 – 6,264,657	+	6	120	81.67	-2.56	0.63	0.846385
				2770	6,264,555 – 6,264,657	-	6	120	81.67	-2.47	0.67	0.858614
				2771	6,264,595 – 6,264,697	-	6	120	81.24	-2.85	0.51	0.822793
1659	2R_DroMel_CAF1	6,266,698 – 6,266,796	- - - - - - - - -	2772	6,266,698 – 6,266,796	-	6	107	87.98	-2.26	0.79	0.600088
1660	2R_DroMel_CAF1	6,276,737 – 6,276,840	- - - - - - - - -	2773	6,276,737 – 6,276,840	+	5	108	94.10	-1.98	0.89	0.994735
1661	2R_DroMel_CAF1	6,280,062 – 6,280,159	- - - - - - - - -	2774	6,280,062 – 6,280,159	-	4	104	76.95	-3.05	0.39	0.736353
1662	2R_DroMel_CAF1	6,282,519 – 6,282,694	- - - - - - - - -	2775	6,282,519 – 6,282,618	-	3	115	64.13	-1.55	0.51	0.695173
				2776	6,282,544 – 6,282,658	+	4	120	75.90	-2.32	0.57	0.966536
				2777	6,282,544 – 6,282,658	-	4	120	75.90	-2.35	0.54	0.942343
				2778	6,282,578 – 6,282,694	+	4	118	81.10	-2.18	0.69	0.937463
				2779	6,282,578 – 6,282,694	-	4	118	81.10	-1.84	0.71	0.802435
1663	2R_DroMel_CAF1	6,283,073 – 6,283,191	- - - - - - - - -	2780	6,283,073 – 6,283,191	+	4	118	94.99	-1.67	0.82	0.500000
1664	2R_DroMel_CAF1	6,283,898 – 6,284,041	- - - - - - - - -	2781	6,283,898 – 6,284,002	+	5	120	77.90	-1.82	0.30	0.518446
1664	2R_DroMel_CAF1	6,283,898 – 6,284,041	- - - - - - - - -	2782	6,283,930 – 6,284,041	+	5	120	70.49	-2.36	0.41	0.991396
1665	2R_DroMel_CAF1	6,292,908 – 6,293,010	- - - - - - - - -	2783	6,292,908 – 6,293,010	+	4	107	69.67	-2.38	0.46	0.964912
1666	2R_DroMel_CAF1	6,300,338 – 6,300,436	- - - - - - - - -	2784	6,300,338 – 6,300,436	+	4	104	79.51	-1.40	0.80	0.547748
1667	2R_DroMel_CAF1	6,311,579 – 6,311,679	- - - - - - - - -	2785	6,311,579 – 6,311,679	-	6	104	80.37	-1.70	0.63	0.671678
1668	2R_DroMel_CAF1	6,315,365 – 6,315,475	- - - - - - - - -	2786	6,315,365 – 6,315,475	-	5	114	79.49	-1.99	0.38	0.505096
1669	2R_DroMel_CAF1	6,317,289 – 6,317,383	- - - "knownCDS=Parent=FBtr0088253;Name=CG12340-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12340-RA" - - - - -	2787	6,317,289 – 6,317,383	-	6	105	76.22	-1.13	0.68	0.650881
1670	2R_DroMel_CAF1	6,324,448 – 6,324,541	- - - - - - - - -	2788	6,324,448 – 6,324,541	+	5	101	74.44	-1.76	0.80	0.987145
1671	2R_DroMel_CAF1	6,332,220 – 6,332,344	- - - "knownCDS=Parent=FBtr0088250;Name=CG12342-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12342-RB" - - - - -	2789	6,332,220 – 6,332,314	+	5	94	92.13	-1.93	0.79	0.895632
1671	2R_DroMel_CAF1	6,332,220 – 6,332,344		2790	6,332,254 – 6,332,344	+	5	90	92.89	-1.49	0.78	0.520354
1672	2R_DroMel_CAF1	6,333,195 – 6,333,289	- - - "knownCDS=Parent=FBtr0088250;Name=CG12342-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12342-RB" - - - - -	2791	6,333,195 – 6,333,289	+	6	104	78.36	-1.89	0.63	0.877566
1672	2R_DroMel_CAF1	6,333,195 – 6,333,289		2792	6,333,195 – 6,333,289	-	6	104	78.36	-2.64	0.41	0.823387
1673	2R_DroMel_CAF1	6,335,323 – 6,335,413	- - - - - - - - -	2793	6,335,323 – 6,335,413	+	6	98	80.72	-1.85	0.60	0.649852
1674	2R_DroMel_CAF1	6,335,711 – 6,335,835	- - - - - - - - -	2794	6,335,711 – 6,335,802	+	6	96	88.67	-1.25	0.93	0.705213
				2795	6,335,743 – 6,335,835	+	6	103	80.08	-1.87	0.72	0.875957
				2796	6,335,743 – 6,335,835	-	6	103	80.08	-1.43	0.77	0.766612
1675	2R_DroMel_CAF1	6,344,514 – 6,344,616	- - - - - - - - -	2797	6,344,514 – 6,344,616	-	6	120	81.11	-1.63	0.72	0.743187
1676	2R_DroMel_CAF1	6,350,468 – 6,350,561	- - - - - - - - -	2798	6,350,468 – 6,350,561	-	4	93	81.10	-1.50	0.78	0.567787
1677	2R_DroMel_CAF1	6,354,447 – 6,354,546	- - - - - - - - -	2799	6,354,447 – 6,354,546	-	6	101	81.00	-1.64	0.65	0.645631
1678	2R_DroMel_CAF1	6,355,553 – 6,355,645	- - - - - - - - -	2800	6,355,553 – 6,355,645	-	5	92	95.87	-1.92	1.00	0.999231
1679	2R_DroMel_CAF1	6,356,043 – 6,356,146	- - - "knownCDS=Parent=FBtr0088242;Name=CG30015-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30015-RA" - - - - -	2801	6,356,043 – 6,356,146	+	5	103	91.65	-1.39	0.84	0.688635
1679	2R_DroMel_CAF1	6,356,043 – 6,356,146		2802	6,356,043 – 6,356,146	-	5	103	91.65	-1.86	0.78	0.831693
1680	2R_DroMel_CAF1	6,356,803 – 6,356,907	- - - "knownCDS=Parent=FBtr0088242;Name=CG30015-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30015-RA" - - - - -	2803	6,356,803 – 6,356,907	-	5	113	89.50	-1.94	0.77	0.858660
1681	2R_DroMel_CAF1	6,359,335 – 6,359,438	- - - "knownCDS=Parent=FBtr0088242;Name=CG30015-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30015-RA" - - - - -	2804	6,359,335 – 6,359,438	+	6	110	76.88	-1.27	0.65	0.617484
1682	2R_DroMel_CAF1	6,362,992 – 6,363,083	- - - - - - - - -	2805	6,362,992 – 6,363,083	+	6	106	82.80	-2.57	0.60	0.677927
1683	2R_DroMel_CAF1	6,373,957 – 6,374,047	- - - - - - - - -	2806	6,373,957 – 6,374,047	+	6	104	83.29	-2.19	0.71	0.712454
1684	2R_DroMel_CAF1	6,377,944 – 6,378,062	- - - - - - - - -	2807	6,377,944 – 6,378,062	+	5	119	77.90	-1.74	0.55	0.518803
1684	2R_DroMel_CAF1	6,377,944 – 6,378,062	- - - - - - - - -	2808	6,377,944 – 6,378,062	-	5	119	77.90	-1.97	0.54	0.783484
1685	2R_DroMel_CAF1	6,378,962 – 6,379,077	- - - - - - - - -	2809	6,378,962 – 6,379,077	+	4	117	83.46	-2.63	0.53	0.599748
1685	2R_DroMel_CAF1	6,378,962 – 6,379,077	- - - - - - - - -	2810	6,378,962 – 6,379,077	-	4	117	83.46	-1.90	0.65	0.711592
1686	2R_DroMel_CAF1	6,388,397 – 6,388,506	- - - - - - - - -	2811	6,388,397 – 6,388,506	+	5	117	75.46	-2.26	0.40	0.965221
1687	2R_DroMel_CAF1	6,392,301 – 6,392,421	- - - "knownCDS=Parent=FBtr0088228;Name=CG6751-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6751-RA" - - - - -	2812	6,392,301 – 6,392,421	+	6	120	80.61	-2.22	0.62	0.840914
1688	2R_DroMel_CAF1	6,396,816 – 6,396,918	- - - "knownCDS=Parent=FBtr0100498;Name=CG11919-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11919-RA" - - - - -	2813	6,396,816 – 6,396,918	-	6	102	78.82	-2.01	0.53	0.713170
1689	2R_DroMel_CAF1	6,403,499 – 6,403,631	- - - "knownCDS=Parent=FBtr0088235;Name=CG30020-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30020-RA" - - - - -	2814	6,403,499 – 6,403,605	+	6	110	81.37	-1.68	0.62	0.549078
				2815	6,403,499 – 6,403,605	-	6	110	81.37	-2.07	0.65	0.784219
				2816	6,403,525 – 6,403,631	+	6	106	82.08	-1.87	0.62	0.562129
				2817	6,403,525 – 6,403,631	-	6	106	82.08	-1.96	0.71	0.756274
1690	2R_DroMel_CAF1	6,414,476 – 6,414,676	- - - "knownCDS=Parent=FBtr0088237;Name=Rpb5-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11979-RA" - - - - -	2818	6,414,476 – 6,414,596	-	5	120	94.42	-1.20	0.93	0.762885
1690	2R_DroMel_CAF1	6,414,476 – 6,414,676		2819	6,414,556 – 6,414,676	-	5	120	96.67	-1.05	0.97	0.526918
1691	2R_DroMel_CAF1	6,415,564 – 6,415,667	- - - - - - - - -	2820	6,415,564 – 6,415,667	+	4	113	77.83	-3.07	0.43	0.866041
1692	2R_DroMel_CAF1	6,415,707 – 6,415,827	- - - - - - - - -	2821	6,415,707 – 6,415,827	+	5	120	96.33	-1.62	0.94	0.979629
1693	2R_DroMel_CAF1	6,416,498 – 6,416,618	- - - - - - - - -	2822	6,416,498 – 6,416,618	-	5	120	93.73	-2.49	0.88	0.999306
1694	2R_DroMel_CAF1	6,417,299 – 6,417,419	- - - - - - - - -	2823	6,417,299 – 6,417,419	+	5	120	94.66	-2.16	0.91	0.998877
1695	2R_DroMel_CAF1	6,418,027 – 6,418,130	- - - - - - - - -	2824	6,418,027 – 6,418,130	+	5	120	83.01	-2.51	0.68	0.948083
1696	2R_DroMel_CAF1	6,419,113 – 6,419,393	- - - - - - - - -	2825	6,419,113 – 6,419,233	-	5	120	89.97	-2.08	0.78	0.915637
				2826	6,419,153 – 6,419,273	-	5	120	94.49	-1.55	0.86	0.891207
				2827	6,419,193 – 6,419,313	+	5	120	97.67	-1.15	1.00	0.694002
				2828	6,419,193 – 6,419,313	-	5	120	97.67	-2.35	0.97	0.999645
				2829	6,419,233 – 6,419,353	+	5	120	97.42	-3.17	0.94	0.999900
				2830	6,419,233 – 6,419,353	-	5	120	97.42	-3.51	1.01	0.999980
				2831	6,419,273 – 6,419,393	+	5	120	95.58	-3.23	0.93	0.999956
				2832	6,419,273 – 6,419,393	-	5	120	95.58	-1.80	0.97	0.997317
1697	2R_DroMel_CAF1	6,424,179 – 6,424,277	- - - - - - - - -	2833	6,424,179 – 6,424,277	-	6	102	79.65	-1.94	0.52	0.517656
1698	2R_DroMel_CAF1	6,425,043 – 6,425,180	- - - - - - - - -	2834	6,425,043 – 6,425,149	+	6	120	80.62	-2.12	0.63	0.824972
				2835	6,425,043 – 6,425,149	-	6	120	80.62	-2.24	0.54	0.696350
				2836	6,425,082 – 6,425,180	+	4	113	72.10	-2.02	0.60	0.975687
1699	2R_DroMel_CAF1	6,429,895 – 6,430,002	- - - - - - - - -	2837	6,429,895 – 6,430,002	-	3	109	81.23	-2.15	0.67	0.856413
1700	2R_DroMel_CAF1	6,432,298 – 6,432,394	- - - - - - - - -	2838	6,432,298 – 6,432,394	-	5	100	91.99	-1.32	0.83	0.593576
1701	2R_DroMel_CAF1	6,435,196 – 6,435,323	- - - - - - - - -	2839	6,435,196 – 6,435,309	+	6	118	80.35	-2.74	0.58	0.927417
				2840	6,435,232 – 6,435,323	+	6	93	74.15	-1.55	0.62	0.847532
				2841	6,435,232 – 6,435,323	-	6	93	74.15	-1.18	0.63	0.544430
1702	2R_DroMel_CAF1	6,436,746 – 6,436,912	- - - - - - - - -	2842	6,436,746 – 6,436,842	-	5	97	84.16	-2.53	0.57	0.753209
				2843	6,436,764 – 6,436,872	-	5	112	82.85	-2.66	0.52	0.842355
				2844	6,436,802 – 6,436,912	-	5	113	90.07	-1.73	0.88	0.961289
1703	2R_DroMel_CAF1	6,440,564 – 6,440,671	- - - - - - - - -	2845	6,440,564 – 6,440,671	-	6	119	80.62	-1.86	0.58	0.594592
1704	2R_DroMel_CAF1	6,447,107 – 6,447,201	- - - - - - - - -	2846	6,447,107 – 6,447,201	-	6	98	81.51	-1.93	0.72	0.806802
1705	2R_DroMel_CAF1	6,447,446 – 6,447,577	- - - - - - - - -	2847	6,447,446 – 6,447,538	-	6	110	76.42	-1.97	0.49	0.749487
1705	2R_DroMel_CAF1	6,447,446 – 6,447,577	- - - - - - - - -	2848	6,447,482 – 6,447,577	-	6	110	81.68	-2.44	0.57	0.723449
1706	2R_DroMel_CAF1	6,452,594 – 6,452,739	- - - - - - - - -	2849	6,452,594 – 6,452,706	-	4	114	83.19	-1.55	0.73	0.589221
1706	2R_DroMel_CAF1	6,452,594 – 6,452,739	- - - - - - - - -	2850	6,452,632 – 6,452,739	-	5	110	85.93	-2.17	0.80	0.942237
1707	2R_DroMel_CAF1	6,452,872 – 6,452,993	- - - - - - - - -	2851	6,452,872 – 6,452,969	+	6	100	81.48	-1.22	0.72	0.514599
				2852	6,452,872 – 6,452,969	-	6	100	81.48	-1.51	0.66	0.568910
				2853	6,452,893 – 6,452,993	-	5	100	88.30	-1.56	0.79	0.644473
1708	2R_DroMel_CAF1	6,458,414 – 6,458,571	- - - - - - - - -	2854	6,458,414 – 6,458,505	+	5	91	95.38	-2.05	0.90	0.996329
				2855	6,458,414 – 6,458,505	-	5	91	95.38	-2.40	0.94	0.999818
				2856	6,458,439 – 6,458,540	-	6	106	88.12	-2.16	0.81	0.680060
				2857	6,458,469 – 6,458,571	+	6	116	92.50	-2.10	0.86	0.920546
				2858	6,458,469 – 6,458,571	-	6	116	92.50	-2.14	0.93	0.996993
1709	2R_DroMel_CAF1	6,458,916 – 6,459,014	- - - - - - - - -	2859	6,458,916 – 6,459,014	+	6	102	79.99	-1.12	0.79	0.601430
1710	2R_DroMel_CAF1	6,459,792 – 6,459,899	- - - - - - - - -	2860	6,459,792 – 6,459,899	-	5	107	90.50	-1.42	0.83	0.664119
1711	2R_DroMel_CAF1	6,460,557 – 6,460,686	- - - - - - - - -	2861	6,460,557 – 6,460,657	+	6	112	79.97	-2.35	0.60	0.897363
1711	2R_DroMel_CAF1	6,460,557 – 6,460,686	- - - - - - - - -	2862	6,460,581 – 6,460,686	+	6	111	78.43	-1.46	0.67	0.764507
1712	2R_DroMel_CAF1	6,461,071 – 6,461,179	- - - - - - - - -	2863	6,461,071 – 6,461,179	-	5	115	89.62	-1.62	0.77	0.671330
1713	2R_DroMel_CAF1	6,462,076 – 6,462,176	- - - - - - - - -	2864	6,462,076 – 6,462,176	+	3	104	92.88	-2.54	0.82	0.781419
1714	2R_DroMel_CAF1	6,462,311 – 6,462,406	- - - - - - - - -	2865	6,462,311 – 6,462,406	+	6	114	81.49	-2.30	0.65	0.821694
1715	2R_DroMel_CAF1	6,472,846 – 6,472,953	- - - - - - - - -	2866	6,472,846 – 6,472,953	+	4	112	77.76	-1.80	0.62	0.687304
1716	2R_DroMel_CAF1	6,473,724 – 6,473,830	- - - - - - - - -	2867	6,473,724 – 6,473,830	-	4	119	82.60	-2.00	0.58	0.543482
1717	2R_DroMel_CAF1	6,473,883 – 6,474,000	- - - - - - - - -	2868	6,473,883 – 6,474,000	+	4	119	87.78	-1.83	0.70	0.679739
1718	2R_DroMel_CAF1	6,475,252 – 6,475,359	- - - - - - - - -	2869	6,475,252 – 6,475,359	-	5	107	86.73	-2.51	0.67	0.815716
1719	2R_DroMel_CAF1	6,475,578 – 6,475,674	- - - - - - - - -	2870	6,475,578 – 6,475,674	+	6	105	83.16	-2.17	0.76	0.780156
1720	2R_DroMel_CAF1	6,476,488 – 6,476,594	- - - - - - - - -	2871	6,476,488 – 6,476,594	+	4	106	93.33	-2.44	0.90	0.978669
1720	2R_DroMel_CAF1	6,476,488 – 6,476,594	- - - - - - - - -	2872	6,476,488 – 6,476,594	-	4	106	93.33	-2.72	0.82	0.934926
1721	2R_DroMel_CAF1	6,476,634 – 6,476,744	- - - - - - - - -	2873	6,476,634 – 6,476,744	-	3	116	71.93	-1.25	0.64	0.516887
1722	2R_DroMel_CAF1	6,477,276 – 6,477,441	- - - - - - - - -	2874	6,477,276 – 6,477,369	+	5	96	87.03	-1.79	0.73	0.660731
				2875	6,477,338 – 6,477,441	+	6	109	80.45	-1.94	0.56	0.586745
				2876	6,477,338 – 6,477,441	-	6	109	80.45	-2.75	0.48	0.815367
1723	2R_DroMel_CAF1	6,486,062 – 6,486,182	- - - - - - - - -	2877	6,486,062 – 6,486,156	+	6	96	84.87	-2.42	0.71	0.567455
				2878	6,486,062 – 6,486,156	-	6	96	84.87	-2.93	0.73	0.755170
				2879	6,486,080 – 6,486,182	-	6	120	83.91	-1.84	0.80	0.690470
1724	2R_DroMel_CAF1	6,489,616 – 6,489,750	- - - - - - - - -	2880	6,489,616 – 6,489,715	+	4	107	84.50	-2.61	0.80	0.984330
				2881	6,489,616 – 6,489,715	-	4	107	84.50	-3.20	0.69	0.987085
				2882	6,489,655 – 6,489,750	+	4	103	83.33	-2.81	0.83	0.994695
				2883	6,489,655 – 6,489,750	-	4	103	83.33	-2.63	0.74	0.982337
1725	2R_DroMel_CAF1	6,490,308 – 6,490,442	- - - - - - - - -	2884	6,490,308 – 6,490,403	-	6	102	87.53	-2.75	0.76	0.630472
				2885	6,490,344 – 6,490,442	+	6	105	90.70	-2.55	0.86	0.968088
				2886	6,490,344 – 6,490,442	-	6	105	90.70	-2.02	0.85	0.843296
1726	2R_DroMel_CAF1	6,500,642 – 6,500,741	- - - - - - - - -	2887	6,500,642 – 6,500,741	+	6	110	77.29	-1.40	0.75	0.878588
1726	2R_DroMel_CAF1	6,500,642 – 6,500,741	- - - - - - - - -	2888	6,500,642 – 6,500,741	-	6	110	77.29	-1.54	0.67	0.845316
1727	2R_DroMel_CAF1	6,501,486 – 6,501,576	- - - - - - - - -	2889	6,501,486 – 6,501,576	-	6	101	78.13	-1.93	0.55	0.749632
1728	2R_DroMel_CAF1	6,501,934 – 6,502,051	- - - - - - - - -	2890	6,501,934 – 6,502,051	+	5	117	89.86	-2.35	0.85	0.995642
1728	2R_DroMel_CAF1	6,501,934 – 6,502,051	- - - - - - - - -	2891	6,501,934 – 6,502,051	-	5	117	89.86	-2.49	0.80	0.986739
1729	2R_DroMel_CAF1	6,505,293 – 6,505,402	- - - - - - - - -	2892	6,505,293 – 6,505,402	+	4	109	78.09	-1.85	0.62	0.736369
1730	2R_DroMel_CAF1	6,511,791 – 6,511,888	- - - - - - - - -	2893	6,511,791 – 6,511,888	+	6	120	79.01	-2.02	0.58	0.818846
1730	2R_DroMel_CAF1	6,511,791 – 6,511,888	- - - - - - - - -	2894	6,511,791 – 6,511,888	-	6	120	79.01	-1.54	0.62	0.633150
1731	2R_DroMel_CAF1	6,512,715 – 6,512,806	- - - - - - - - -	2895	6,512,715 – 6,512,806	-	6	108	83.28	-1.65	0.82	0.672408
1732	2R_DroMel_CAF1	6,514,004 – 6,514,123	- - - - - - - - -	2896	6,514,004 – 6,514,123	+	6	120	78.25	-1.48	0.64	0.715325
1733	2R_DroMel_CAF1	6,519,815 – 6,519,905	- - - - - - - - -	2897	6,519,815 – 6,519,905	-	6	96	82.89	-2.05	0.79	0.814734
1734	2R_DroMel_CAF1	6,521,536 – 6,521,635	- - - - - - - - -	2898	6,521,536 – 6,521,635	+	6	104	72.80	-1.64	0.71	0.971662
1735	2R_DroMel_CAF1	6,524,363 – 6,524,477	- - - - - - - - -	2899	6,524,363 – 6,524,477	-	6	120	78.75	-2.22	0.47	0.661163
1736	2R_DroMel_CAF1	6,535,632 – 6,535,725	- - - - - - - - -	2900	6,535,632 – 6,535,725	-	5	98	86.32	-1.90	0.75	0.775758
1737	2R_DroMel_CAF1	6,544,562 – 6,544,655	- - - - - - - - -	2901	6,544,562 – 6,544,655	-	6	102	78.54	-1.94	0.79	0.945061
1738	2R_DroMel_CAF1	6,550,739 – 6,550,853	- - - - - - - - -	2902	6,550,739 – 6,550,832	+	6	93	91.40	-2.84	0.89	0.997888
1738	2R_DroMel_CAF1	6,550,739 – 6,550,853	- - - - - - - - -	2903	6,550,762 – 6,550,853	+	6	109	71.30	-1.38	0.56	0.561832
1739	2R_DroMel_CAF1	6,555,021 – 6,555,118	- - - - - - - - -	2904	6,555,021 – 6,555,118	-	6	99	84.91	-1.65	0.85	0.670877
1740	2R_DroMel_CAF1	6,555,262 – 6,555,357	- - - - - - - - -	2905	6,555,262 – 6,555,357	+	6	101	77.67	-2.79	0.46	0.964316
1741	2R_DroMel_CAF1	6,558,311 – 6,558,410	- - - - - - - - -	2906	6,558,311 – 6,558,410	+	5	103	74.70	-1.54	0.71	0.891766
1742	2R_DroMel_CAF1	6,560,350 – 6,560,449	- - - - - - - - -	2907	6,560,350 – 6,560,449	+	5	99	90.48	-2.28	0.72	0.754669
1743	2R_DroMel_CAF1	6,560,617 – 6,560,711	- - - - - - - - -	2908	6,560,617 – 6,560,711	+	6	95	93.92	-2.35	0.95	0.999715
1744	2R_DroMel_CAF1	6,562,057 – 6,562,160	- - - - - - - - -	2909	6,562,057 – 6,562,160	+	6	103	85.83	-3.06	0.83	0.955297
1744	2R_DroMel_CAF1	6,562,057 – 6,562,160	- - - - - - - - -	2910	6,562,057 – 6,562,160	-	6	103	85.83	-3.48	0.79	0.939087
1745	2R_DroMel_CAF1	6,565,892 – 6,566,027	- - - - - - - - -	2911	6,565,892 – 6,565,998	+	6	120	76.13	-1.39	0.64	0.737350
				2912	6,565,892 – 6,565,998	-	6	120	76.13	-1.95	0.74	0.974228
				2913	6,565,918 – 6,566,027	-	6	120	72.70	-1.17	0.61	0.500000
1746	2R_DroMel_CAF1	6,568,003 – 6,568,094	- - - - - - - - -	2914	6,568,003 – 6,568,094	-	4	112	77.59	-1.89	0.82	0.960034
1747	2R_DroMel_CAF1	6,570,647 – 6,570,739	- - - - - - - - -	2915	6,570,647 – 6,570,739	+	6	92	90.90	-4.34	0.90	0.999716
1748	2R_DroMel_CAF1	6,571,499 – 6,571,592	- - - - - - - - -	2916	6,571,499 – 6,571,592	+	6	111	73.72	-1.35	0.59	0.560265
1749	2R_DroMel_CAF1	6,577,767 – 6,577,857	- - - - - - - - -	2917	6,577,767 – 6,577,857	+	3	91	87.92	-1.39	0.94	0.711570
1750	2R_DroMel_CAF1	6,580,228 – 6,580,328	- - - - - - - - -	2918	6,580,228 – 6,580,328	-	5	100	90.12	-2.28	0.68	0.519921
1751	2R_DroMel_CAF1	6,585,110 – 6,585,209	- - - - - - - - -	2919	6,585,110 – 6,585,209	+	3	100	88.93	-1.33	0.94	0.610099
1752	2R_DroMel_CAF1	6,585,450 – 6,585,540	- - - - - - - - -	2920	6,585,450 – 6,585,540	+	5	103	71.08	-1.80	0.23	0.736844
1753	2R_DroMel_CAF1	6,586,201 – 6,586,345	- - - - - - - - -	2921	6,586,201 – 6,586,305	+	3	104	85.71	-3.30	1.00	0.998288
				2922	6,586,201 – 6,586,305	-	3	104	85.71	-1.35	0.89	0.608435
				2923	6,586,239 – 6,586,345	+	5	120	83.03	-2.80	0.57	0.928802
1754	2R_DroMel_CAF1	6,586,692 – 6,586,789	- - - - - - - - -	2924	6,586,692 – 6,586,789	-	6	110	85.95	-2.26	0.74	0.528273
1755	2R_DroMel_CAF1	6,588,520 – 6,588,625	- - - - - - - - -	2925	6,588,520 – 6,588,625	-	5	105	81.54	-1.56	0.76	0.617404
1756	2R_DroMel_CAF1	6,588,672 – 6,588,770	- - - - - - - - -	2926	6,588,672 – 6,588,770	+	6	112	77.01	-1.67	0.59	0.745086
1757	2R_DroMel_CAF1	6,594,800 – 6,594,912	- - - - - - - - -	2927	6,594,800 – 6,594,912	-	5	116	72.44	-1.98	0.61	0.971027
1758	2R_DroMel_CAF1	6,597,112 – 6,597,203	- - - - - - - - -	2928	6,597,112 – 6,597,203	-	4	91	95.42	-2.26	0.91	0.942913
1759	2R_DroMel_CAF1	6,597,650 – 6,597,742	- - - - - - - - -	2929	6,597,650 – 6,597,742	+	6	103	78.13	-1.53	0.73	0.878574
1759	2R_DroMel_CAF1	6,597,650 – 6,597,742	- - - - - - - - -	2930	6,597,650 – 6,597,742	-	6	103	78.13	-2.05	0.66	0.938670
1760	2R_DroMel_CAF1	6,598,603 – 6,598,707	- - - - - - - - -	2931	6,598,603 – 6,598,707	-	6	120	74.88	-1.66	0.53	0.633836
1761	2R_DroMel_CAF1	6,598,741 – 6,598,868	- - - - - - - - -	2932	6,598,741 – 6,598,841	+	4	102	90.86	-3.11	0.81	0.974639
				2933	6,598,741 – 6,598,841	-	4	102	90.86	-2.57	0.88	0.987359
				2934	6,598,777 – 6,598,868	-	4	98	87.50	-1.54	0.80	0.642468
1762	2R_DroMel_CAF1	6,599,011 – 6,599,108	- - - - - - - - -	2935	6,599,011 – 6,599,108	-	6	113	78.58	-1.97	0.49	0.522523
1763	2R_DroMel_CAF1	6,599,511 – 6,599,602	- - - - - - - - -	2936	6,599,511 – 6,599,602	+	5	96	88.09	-1.64	0.81	0.759765
1764	2R_DroMel_CAF1	6,599,776 – 6,599,867	- - - - - - - - -	2937	6,599,776 – 6,599,867	-	3	102	84.92	-2.66	0.72	0.897630
1765	2R_DroMel_CAF1	6,601,000 – 6,601,141	- - - - - - - - -	2938	6,601,000 – 6,601,110	+	4	112	87.11	-2.97	0.83	0.991788
				2939	6,601,000 – 6,601,110	-	4	112	87.11	-1.56	0.84	0.687272
				2940	6,601,036 – 6,601,141	+	4	106	84.46	-2.94	0.71	0.983766
				2941	6,601,036 – 6,601,141	-	4	106	84.46	-2.23	0.75	0.931235
1766	2R_DroMel_CAF1	6,604,292 – 6,604,388	- - - - - - - - -	2942	6,604,292 – 6,604,388	-	6	112	87.33	-2.16	0.83	0.796624
1767	2R_DroMel_CAF1	6,609,032 – 6,609,136	- - - - - - - - -	2943	6,609,032 – 6,609,136	-	6	120	79.30	-1.67	0.72	0.862929
1768	2R_DroMel_CAF1	6,610,536 – 6,610,627	- - - - - - - - -	2944	6,610,536 – 6,610,627	-	4	98	72.80	-2.60	0.55	0.996925
1769	2R_DroMel_CAF1	6,612,263 – 6,612,399	- - - - - - - - -	2945	6,612,263 – 6,612,370	+	5	119	78.93	-2.12	0.73	0.961463
1769	2R_DroMel_CAF1	6,612,263 – 6,612,399	- - - - - - - - -	2946	6,612,290 – 6,612,399	+	5	113	84.72	-2.24	0.61	0.681881
1770	2R_DroMel_CAF1	6,625,089 – 6,625,189	- - - - - - - - -	2947	6,625,089 – 6,625,189	-	6	100	97.00	-1.39	0.87	0.589579
1771	2R_DroMel_CAF1	6,625,235 – 6,625,342	- - - - - - - - -	2948	6,625,235 – 6,625,342	+	5	108	89.35	-2.26	0.77	0.943805
1771	2R_DroMel_CAF1	6,625,235 – 6,625,342	- - - - - - - - -	2949	6,625,235 – 6,625,342	-	5	108	89.35	-1.48	0.78	0.566714
1772	2R_DroMel_CAF1	6,628,996 – 6,629,101	- - - - - - - - -	2950	6,628,996 – 6,629,101	+	5	107	82.25	-2.00	0.65	0.777053
1773	2R_DroMel_CAF1	6,629,610 – 6,629,717	- - - - - - - - -	2951	6,629,610 – 6,629,717	-	6	112	85.28	-2.56	0.72	0.602761
1774	2R_DroMel_CAF1	6,632,423 – 6,632,521	- - - "knownCDS=Parent=FBtr0088209;Name=CG30490-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30490-RA" - - - - -	2952	6,632,423 – 6,632,521	+	6	103	77.85	-2.66	0.50	0.961721
1774	2R_DroMel_CAF1	6,632,423 – 6,632,521		2953	6,632,423 – 6,632,521	-	6	103	77.85	-1.99	0.56	0.833439
1775	2R_DroMel_CAF1	6,634,819 – 6,634,928	- - - - - - - - -	2954	6,634,819 – 6,634,928	-	6	111	85.85	-1.81	0.81	0.603388
1776	2R_DroMel_CAF1	6,636,154 – 6,636,274	- - - "knownCDS=Parent=FBtr0089419;Name=Cyp12d1-p-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30489-RA" - - - - -	2955	6,636,154 – 6,636,274	+	5	120	89.75	-1.77	0.84	0.917692
1777	2R_DroMel_CAF1	6,643,997 – 6,644,095	- - - - - - - - -	2956	6,643,997 – 6,644,095	-	5	98	81.78	-1.61	0.69	0.576088
1778	2R_DroMel_CAF1	6,645,134 – 6,645,226	- - - - - - - - -	2957	6,645,134 – 6,645,226	-	6	115	81.40	-1.50	0.67	0.594771
1779	2R_DroMel_CAF1	6,648,130 – 6,648,261	- - - - - - - - -	2958	6,648,130 – 6,648,233	+	4	112	94.88	-2.27	1.00	0.986551
				2959	6,648,130 – 6,648,233	-	4	112	94.88	-1.69	0.97	0.867069
				2960	6,648,161 – 6,648,261	+	6	106	92.22	-1.38	0.88	0.649120
1780	2R_DroMel_CAF1	6,670,922 – 6,671,124	- - - "knownCDS=Parent=FBtr0088204;Name=CG13230-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13230-RA" - - - - -	2961	6,670,922 – 6,671,021	-	6	99	77.87	-1.28	0.76	0.821718
1780	2R_DroMel_CAF1	6,670,922 – 6,671,124		2962	6,671,021 – 6,671,124	-	6	104	78.36	-2.09	0.49	0.676521
1781	2R_DroMel_CAF1	6,672,146 – 6,672,250	- - - - - - - - -	2963	6,672,146 – 6,672,250	+	6	120	81.40	-2.74	0.58	0.855618
1782	2R_DroMel_CAF1	6,673,074 – 6,673,184	- - - - - - - - -	2964	6,673,074 – 6,673,184	+	5	120	80.82	-2.02	0.60	0.767137
1783	2R_DroMel_CAF1	6,680,157 – 6,680,251	- - - - - - - - -	2965	6,680,157 – 6,680,251	-	5	95	77.88	-1.63	0.13	0.607422
1784	2R_DroMel_CAF1	6,681,285 – 6,681,405	- - - - - - - - -	2966	6,681,285 – 6,681,405	+	5	120	78.51	-1.67	0.65	0.681496
1785	2R_DroMel_CAF1	6,688,145 – 6,688,241	- - - - - - - - -	2967	6,688,145 – 6,688,241	+	6	102	88.29	-3.06	0.76	0.704581
1785	2R_DroMel_CAF1	6,688,145 – 6,688,241	- - - - - - - - -	2968	6,688,145 – 6,688,241	-	6	102	88.29	-3.62	0.77	0.901214
1786	2R_DroMel_CAF1	6,694,142 – 6,694,239	- - - - - - - - -	2969	6,694,142 – 6,694,239	-	5	110	77.72	-1.35	0.70	0.500000
1787	2R_DroMel_CAF1	6,695,287 – 6,695,388	- - - - - - - - -	2970	6,695,287 – 6,695,388	+	6	111	83.99	-2.04	0.77	0.703648
1787	2R_DroMel_CAF1	6,695,287 – 6,695,388	- - - - - - - - -	2971	6,695,287 – 6,695,388	-	6	111	83.99	-2.54	0.70	0.692762
1788	2R_DroMel_CAF1	6,697,110 – 6,697,203	- - - - - - - - -	2972	6,697,110 – 6,697,203	-	5	97	72.58	-2.16	0.44	0.969026
1789	2R_DroMel_CAF1	6,704,434 – 6,704,525	- - - - - - - - -	2973	6,704,434 – 6,704,525	+	6	101	80.35	-3.10	0.73	0.962455
1790	2R_DroMel_CAF1	6,704,794 – 6,704,911	- - - - - - - - -	2974	6,704,794 – 6,704,911	+	6	120	84.28	-2.20	0.67	0.500000
1791	2R_DroMel_CAF1	6,705,257 – 6,705,358	- - - - - - - - -	2975	6,705,257 – 6,705,358	+	6	110	74.01	-1.73	0.51	0.705396
1792	2R_DroMel_CAF1	6,705,880 – 6,705,987	- - - - - - - - -	2976	6,705,880 – 6,705,987	-	4	120	76.87	-1.55	0.69	0.606504
1793	2R_DroMel_CAF1	6,710,257 – 6,710,348	- - - - - - - - -	2977	6,710,257 – 6,710,348	-	4	108	75.85	-1.48	0.70	0.600289
1794	2R_DroMel_CAF1	6,710,848 – 6,710,984	- - - - - - - - -	2978	6,710,848 – 6,710,950	+	5	108	80.46	-1.61	0.72	0.667654
				2979	6,710,848 – 6,710,950	-	5	108	80.46	-2.31	0.62	0.934387
				2980	6,710,884 – 6,710,984	+	5	104	88.48	-1.68	0.73	0.569192
				2981	6,710,884 – 6,710,984	-	5	104	88.48	-2.36	0.66	0.608909
1795	2R_DroMel_CAF1	6,715,191 – 6,715,284	- - - - - - - - -	2982	6,715,191 – 6,715,284	+	6	93	83.32	-1.98	0.65	0.530064
1795	2R_DroMel_CAF1	6,715,191 – 6,715,284	- - - - - - - - -	2983	6,715,191 – 6,715,284	-	6	93	83.32	-1.93	0.70	0.613206
1796	2R_DroMel_CAF1	6,718,209 – 6,718,300	- - - - - - - - -	2984	6,718,209 – 6,718,300	+	5	95	89.33	-1.99	0.73	0.740424
1796	2R_DroMel_CAF1	6,718,209 – 6,718,300	- - - - - - - - -	2985	6,718,209 – 6,718,300	-	5	95	89.33	-2.69	0.69	0.794022
1797	2R_DroMel_CAF1	6,727,245 – 6,727,348	- - - "knownCDS=Parent=FBtr0088099;Name=shn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7734-RB" - - - - -	2986	6,727,245 – 6,727,348	-	6	106	80.51	-2.25	0.60	0.826854
1798	2R_DroMel_CAF1	6,729,711 – 6,729,821	- - - "knownCDS=Parent=FBtr0088099;Name=shn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7734-RB" - - - - -	2987	6,729,711 – 6,729,821	+	6	119	80.59	-1.51	0.64	0.581585
1799	2R_DroMel_CAF1	6,731,861 – 6,731,959	- - "RNAmicro=f:6731861_t:6731962_strand:+_p:0.836637" "knownCDS=Parent=FBtr0088099;Name=shn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7734-RB" - - - - -	2988	6,731,861 – 6,731,959	-	6	102	82.20	-1.99	0.68	0.712977
1800	2R_DroMel_CAF1	6,747,151 – 6,747,259	- - - - - - - - -	2989	6,747,151 – 6,747,259	-	3	108	86.73	-1.94	0.80	0.643122
1801	2R_DroMel_CAF1	6,747,483 – 6,747,585	- - - - - - - - -	2990	6,747,483 – 6,747,585	+	3	104	85.16	-1.87	0.81	0.693839
1802	2R_DroMel_CAF1	6,754,121 – 6,754,223	- - - "knownCDS=Parent=FBtr0088193;Name=CG13216-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13216-RA" - - - - -	2991	6,754,121 – 6,754,223	+	4	102	89.71	-1.37	0.81	0.500000
1803	2R_DroMel_CAF1	6,754,252 – 6,754,384	- - - "knownCDS=Parent=FBtr0088193;Name=CG13216-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13216-RA" - - - - -	2992	6,754,252 – 6,754,344	-	6	92	80.80	-1.61	0.60	0.500000
1803	2R_DroMel_CAF1	6,754,252 – 6,754,384		2993	6,754,280 – 6,754,384	-	6	104	79.94	-2.04	0.59	0.773836
1804	2R_DroMel_CAF1	6,758,510 – 6,758,605	- - - - - - - - -	2994	6,758,510 – 6,758,605	-	3	95	87.37	-3.08	0.81	0.944886
1805	2R_DroMel_CAF1	6,759,195 – 6,759,315	- - - - - - - - -	2995	6,759,195 – 6,759,315	+	5	120	77.78	-1.77	0.60	0.691487
1806	2R_DroMel_CAF1	6,759,594 – 6,759,688	- - - - - - - - -	2996	6,759,594 – 6,759,688	+	5	109	77.42	-2.86	0.55	0.997525
1807	2R_DroMel_CAF1	6,761,952 – 6,762,042	- - - - - - - - -	2997	6,761,952 – 6,762,042	+	6	102	73.12	-2.10	0.40	0.838132
1808	2R_DroMel_CAF1	6,778,213 – 6,778,305	- - - - - - - - -	2998	6,778,213 – 6,778,305	+	6	109	79.35	-1.93	0.61	0.818728
1809	2R_DroMel_CAF1	6,786,811 – 6,786,909	- - - - - - - - -	2999	6,786,811 – 6,786,909	+	5	101	90.66	-2.15	0.73	0.741827
1809	2R_DroMel_CAF1	6,786,811 – 6,786,909	- - - - - - - - -	3000	6,786,811 – 6,786,909	-	5	101	90.66	-2.78	0.76	0.972424
1810	2R_DroMel_CAF1	6,787,657 – 6,787,761	- - - - - - - - -	3001	6,787,657 – 6,787,761	+	5	110	85.17	-2.05	0.73	0.839658
1811	2R_DroMel_CAF1	6,788,876 – 6,788,971	- - - - - - - - -	3002	6,788,876 – 6,788,971	+	4	107	89.60	-2.22	0.84	0.946608
1812	2R_DroMel_CAF1	6,789,017 – 6,789,219	- - - - - - - - -	3003	6,789,017 – 6,789,116	+	5	99	86.16	-1.54	0.88	0.705204
				3004	6,789,048 – 6,789,149	+	5	101	86.44	-1.87	0.78	0.815912
				3005	6,789,048 – 6,789,149	-	5	101	86.44	-1.70	0.74	0.624237
				3006	6,789,116 – 6,789,219	-	5	103	95.73	-2.17	0.83	0.972047
1813	2R_DroMel_CAF1	6,789,246 – 6,789,376	- - - - - - - - -	3007	6,789,246 – 6,789,356	+	5	111	90.24	-1.61	0.87	0.908688
				3008	6,789,246 – 6,789,356	-	5	111	90.24	-1.28	0.85	0.525418
				3009	6,789,286 – 6,789,376	-	5	91	89.39	-2.22	0.72	0.778101
1814	2R_DroMel_CAF1	6,789,551 – 6,789,689	- - - - - - - - -	3010	6,789,551 – 6,789,649	+	5	111	82.72	-1.82	0.66	0.650940
1814	2R_DroMel_CAF1	6,789,551 – 6,789,689	- - - - - - - - -	3011	6,789,587 – 6,789,689	-	5	115	82.98	-2.04	0.75	0.884052
1815	2R_DroMel_CAF1	6,790,325 – 6,790,431	- - - - - - - - -	3012	6,790,325 – 6,790,431	+	6	120	69.75	-1.79	0.46	0.827379
1815	2R_DroMel_CAF1	6,790,325 – 6,790,431	- - - - - - - - -	3013	6,790,325 – 6,790,431	-	6	120	69.75	-2.22	0.44	0.975201
1816	2R_DroMel_CAF1	6,790,575 – 6,790,695	- - - "knownCDS=Parent=FBtr0088184;Name=TpnC47D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9073-RA" - - - - -	3014	6,790,575 – 6,790,695	-	6	120	95.17	-1.58	0.94	0.987228
1817	2R_DroMel_CAF1	6,790,920 – 6,791,097	- - - - - - - - -	3015	6,790,920 – 6,791,020	-	4	112	88.36	-1.59	0.75	0.631340
1817	2R_DroMel_CAF1	6,790,920 – 6,791,097	- - - - - - - - -	3016	6,790,983 – 6,791,097	-	3	117	68.04	-1.92	0.52	0.917753
1818	2R_DroMel_CAF1	6,793,051 – 6,793,165	- - - - - - - - -	3017	6,793,051 – 6,793,165	+	6	120	80.25	-1.71	0.64	0.707533
1819	2R_DroMel_CAF1	6,794,180 – 6,794,280	- - - - - - - - -	3018	6,794,180 – 6,794,280	+	6	104	81.73	-1.69	0.71	0.696493
1820	2R_DroMel_CAF1	6,799,835 – 6,799,981	- - - - - - - - -	3019	6,799,835 – 6,799,944	+	5	109	96.24	-1.82	0.94	0.994911
				3020	6,799,835 – 6,799,944	-	5	109	96.24	-2.06	0.91	0.996506
				3021	6,799,873 – 6,799,981	+	6	111	80.06	-1.24	0.77	0.668706
				3022	6,799,873 – 6,799,981	-	6	111	80.06	-2.09	0.73	0.913695
1821	2R_DroMel_CAF1	6,809,527 – 6,809,618	- - - - - - - - -	3023	6,809,527 – 6,809,618	+	3	94	82.80	-1.75	0.77	0.683347
1821	2R_DroMel_CAF1	6,809,527 – 6,809,618	- - - - - - - - -	3024	6,809,527 – 6,809,618	-	3	94	82.80	-2.61	0.79	0.968131
1822	2R_DroMel_CAF1	6,818,752 – 6,818,912	- - - "knownCDS=Parent=FBtr0088171;Name=Obp47b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13208-RA" - - - - -	3025	6,818,752 – 6,818,872	+	4	120	92.89	-1.38	0.91	0.583126
				3026	6,818,752 – 6,818,872	-	4	120	92.89	-1.55	0.91	0.750015
				3027	6,818,792 – 6,818,912	+	4	120	95.00	-1.53	0.95	0.705818
1823	2R_DroMel_CAF1	6,825,553 – 6,825,645	- - - - - - - - -	3028	6,825,553 – 6,825,645	-	5	92	91.46	-1.56	0.88	0.920967
1824	2R_DroMel_CAF1	6,827,425 – 6,827,595	- - - "knownCDS=Parent=FBtr0089382;Name=nompA-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13207-RD" - - - - -	3029	6,827,425 – 6,827,521	+	6	102	76.34	-1.88	0.54	0.804866
1824	2R_DroMel_CAF1	6,827,425 – 6,827,595		3030	6,827,481 – 6,827,595	+	6	120	80.52	-1.35	0.70	0.632880
1825	2R_DroMel_CAF1	6,833,409 – 6,833,528	- - - - - - - - -	3031	6,833,409 – 6,833,499	-	6	94	80.31	-2.07	0.75	0.909071
1825	2R_DroMel_CAF1	6,833,409 – 6,833,528	- - - - - - - - -	3032	6,833,438 – 6,833,528	-	5	90	94.88	-1.68	0.95	0.992459
1826	2R_DroMel_CAF1	6,836,856 – 6,836,961	- - - "knownCDS=Parent=FBtr0088166;Name=Or47b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13206-RA" - - - - -	3033	6,836,856 – 6,836,961	-	6	105	90.16	-2.38	0.83	0.867193
1827	2R_DroMel_CAF1	6,843,036 – 6,843,142	- - - - - - - - -	3034	6,843,036 – 6,843,142	+	5	106	95.00	-1.50	0.88	0.892944
1828	2R_DroMel_CAF1	6,851,804 – 6,851,910	- - - "knownCDS=Parent=FBtr0088120;Name=sha-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13209-RA" - - - - -	3035	6,851,804 – 6,851,910	-	4	120	79.11	-2.20	0.65	0.945838
1829	2R_DroMel_CAF1	6,854,488 – 6,854,582	- - - "knownCDS=Parent=FBtr0088165;Name=kappaTry-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12388-RA" - - - - -	3036	6,854,488 – 6,854,582	-	6	103	80.34	-2.28	0.61	0.868391
1830	2R_DroMel_CAF1	6,854,672 – 6,854,765	- - - - - - - - -	3037	6,854,672 – 6,854,765	+	6	100	80.48	-1.51	0.69	0.693761
1830	2R_DroMel_CAF1	6,854,672 – 6,854,765	- - - - - - - - -	3038	6,854,672 – 6,854,765	-	6	100	80.48	-2.40	0.73	0.930157
1831	2R_DroMel_CAF1	6,866,765 – 6,866,858	- - - "knownCDS=Parent=FBtr0088123;Name=CG30031-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30031-RA" - - - - -	3039	6,866,765 – 6,866,858	-	5	120	75.82	-1.59	0.70	0.856354
1832	2R_DroMel_CAF1	6,873,460 – 6,873,566	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000289; Name=Dmel_SeC(e)_TCA_14000289;TFAMID=DmelZTCA-6873557" "tRNAscan=type:SeC(e):anticodon:TCA f:6873471_t:6873567_strand=-_cove=56.66" - - - - "miRBase=sme-mir-749\|3e-11" - "Flybase=FBgn0011987:transfer_RNA:SeCys:cytosolic_tRNA_gene\|1e-45"	3040	6,873,460 – 6,873,566	+	6	119	80.33	-1.25	0.88	0.664256
1833	2R_DroMel_CAF1	6,880,888 – 6,881,008	- - - - - - - - -	3041	6,880,888 – 6,881,008	-	3	120	86.16	-1.50	0.86	0.560731
1834	2R_DroMel_CAF1	6,883,173 – 6,883,319	- - - - - - - - -	3042	6,883,173 – 6,883,279	+	3	112	94.55	-2.24	0.82	0.601931
				3043	6,883,173 – 6,883,279	-	3	112	94.55	-4.04	0.82	0.893178
				3044	6,883,209 – 6,883,319	+	3	112	97.01	-2.19	0.83	0.532272
1835	2R_DroMel_CAF1	6,885,093 – 6,885,436	- - - "knownCDS=Parent=FBtr0088129;Name=CG13204-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13204-RB" - - - - -	3045	6,885,093 – 6,885,204	+	6	120	82.69	-3.32	0.61	0.874275
				3046	6,885,093 – 6,885,204	-	6	120	82.69	-3.11	0.63	0.852212
				3047	6,885,131 – 6,885,236	+	6	120	82.12	-2.43	0.63	0.775433
				3048	6,885,131 – 6,885,236	-	6	120	82.12	-3.28	0.67	0.923661
				3049	6,885,204 – 6,885,316	-	6	120	81.63	-1.50	0.66	0.548759
				3050	6,885,316 – 6,885,436	+	6	120	91.00	-1.34	0.87	0.534579
1836	2R_DroMel_CAF1	6,885,709 – 6,885,829	- - - "knownCDS=Parent=FBtr0088129;Name=CG13204-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13204-RB" - - - - -	3051	6,885,709 – 6,885,829	+	6	120	89.17	-2.57	0.89	0.988207
1837	2R_DroMel_CAF1	6,892,569 – 6,892,683	- - - "knownCDS=Parent=FBtr0100284;Name=CG13203-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13203-RB" - - - - -	3052	6,892,569 – 6,892,683	+	4	114	93.27	-3.15	0.92	0.994850
1837	2R_DroMel_CAF1	6,892,569 – 6,892,683		3053	6,892,569 – 6,892,683	-	4	114	93.27	-2.06	0.93	0.960387
1838	2R_DroMel_CAF1	6,893,432 – 6,893,542	- - - "knownCDS=Parent=FBtr0088151, FBtr0088152;Name=Tsp47F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9033-RB, FlyBase+Annotation+IDs:CG9033-RA" - - - - -	3054	6,893,432 – 6,893,542	-	6	114	77.07	-1.50	0.62	0.721376
1839	2R_DroMel_CAF1	6,905,631 – 6,905,726	- - - - - - - - -	3055	6,905,631 – 6,905,726	-	6	112	79.66	-2.24	0.55	0.816790
1840	2R_DroMel_CAF1	6,910,222 – 6,910,352	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000068; Name=Dmel_Thr_TGT_14000068;TFAMID=DmelTTGT-6910260" "tRNAscan=type:Thr:anticodon:TGT f:6910259_t:6910367_strand=+_cove=76.08" - - "Rfam=AE003695.2/2735-2806_RF00005;tRNA;\|1e-27" - - - "Flybase=FBgn0050257:CR30257:cytosolic_tRNA_gene\|1e-36"	3056	6,910,222 – 6,910,333	-	6	119	81.18	-1.71	0.80	0.814928
				3057	6,910,258 – 6,910,352	+	6	113	80.44	-1.52	0.94	0.838568
				3058	6,910,258 – 6,910,352	-	6	113	80.44	-1.92	0.91	0.929510
1841	2R_DroMel_CAF1	6,915,676 – 6,915,783	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000069; Name=Dmel_Thr_TGT_14000069;TFAMID=DmelTTGT-6915748" "tRNAscan=type:Thr:anticodon:TGT f:6915676_t:6915747_strand=-_cove=76.08" - - "Rfam=AE003695.2/2735-2806_RF00005;tRNA;\|1e-27" - - - "Flybase=FBgn0050257:CR30257:cytosolic_tRNA_gene\|1e-36"	3059	6,915,676 – 6,915,783	+	6	120	82.20	-1.32	0.83	0.570880
1842	2R_DroMel_CAF1	6,918,181 – 6,918,285	- - - - - - - - -	3060	6,918,181 – 6,918,285	+	4	104	71.92	-1.74	0.70	0.966946
1843	2R_DroMel_CAF1	6,921,117 – 6,921,227	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000071; Name=Dmel_Thr_TGT_14000071;TFAMID=DmelTTGT-6921210" "tRNAscan=type:Thr:anticodon:TGT f:6921138_t:6921230_strand=-_cove=76.08" - - "Rfam=AE003695.2/2735-2806_RF00005;tRNA;\|1e-27" - - - "Flybase=FBgn0050257:CR30257:cytosolic_tRNA_gene\|1e-36"	3061	6,921,117 – 6,921,227	+	6	118	80.87	-1.90	0.87	0.904261
1844	2R_DroMel_CAF1	6,926,396 – 6,926,500	- - - - - - - - -	3062	6,926,396 – 6,926,500	+	3	114	89.58	-2.04	0.83	0.666292
1845	2R_DroMel_CAF1	6,930,899 – 6,931,016	- - - "knownCDS=Parent=FBtr0088135;Name=CG7763-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7763-RA" - - - - -	3063	6,930,899 – 6,931,016	-	5	120	74.37	-1.71	0.52	0.603964
1846	2R_DroMel_CAF1	6,940,190 – 6,940,283	- - - - - - - - -	3064	6,940,190 – 6,940,283	+	4	95	87.05	-2.29	0.67	0.804612
1847	2R_DroMel_CAF1	6,954,584 – 6,954,684	- - - - - - - - -	3065	6,954,584 – 6,954,684	-	5	113	70.99	-2.04	0.42	0.939349
1848	2R_DroMel_CAF1	6,955,296 – 6,955,390	- - - - - - - - -	3066	6,955,296 – 6,955,390	+	3	94	71.53	-1.50	0.65	0.917080
1849	2R_DroMel_CAF1	6,955,896 – 6,956,071	- - - "knownCDS=Parent=FBtr0088136, FBtr0088137;Name=CG7777-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7777-RB, FlyBase+Annotation+IDs:CG7777-RA" - - - - -	3067	6,955,896 – 6,956,016	-	6	120	78.78	-2.85	0.44	0.918151
				3068	6,955,936 – 6,956,045	+	6	119	76.46	-2.38	0.62	0.981527
				3069	6,955,936 – 6,956,045	-	6	119	76.46	-2.33	0.63	0.980169
				3070	6,955,976 – 6,956,071	+	6	109	75.56	-2.04	0.69	0.978732
				3071	6,955,976 – 6,956,071	-	6	109	75.56	-1.13	0.68	0.663534
1850	2R_DroMel_CAF1	6,961,811 – 6,961,940	- - - - - - - - -	3072	6,961,811 – 6,961,911	-	5	100	94.16	-1.29	0.93	0.861362
				3073	6,961,838 – 6,961,940	+	6	105	76.27	-2.39	0.61	0.982411
				3074	6,961,838 – 6,961,940	-	6	105	76.27	-3.45	0.66	0.994585
1851	2R_DroMel_CAF1	6,968,662 – 6,968,782	- - - - - - - - -	3075	6,968,662 – 6,968,782	+	6	120	82.98	-1.92	0.66	0.579455
1852	2R_DroMel_CAF1	6,968,895 – 6,968,998	- - - - - - - - -	3076	6,968,895 – 6,968,998	+	5	103	97.08	-2.72	0.92	0.999741
1852	2R_DroMel_CAF1	6,968,895 – 6,968,998	- - - - - - - - -	3077	6,968,895 – 6,968,998	-	5	103	97.08	-3.07	0.99	0.999975
1853	2R_DroMel_CAF1	6,969,782 – 6,969,872	- - - - - - - - -	3078	6,969,782 – 6,969,872	+	6	106	75.55	-1.77	0.84	0.973106
1853	2R_DroMel_CAF1	6,969,782 – 6,969,872	- - - - - - - - -	3079	6,969,782 – 6,969,872	-	6	106	75.55	-1.85	0.87	0.974429
1854	2R_DroMel_CAF1	6,970,257 – 6,970,377	- - - "knownCDS=Parent=FBtr0088140;Name=E(Pc)-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7776-RB" - - - - -	3080	6,970,257 – 6,970,377	-	6	120	88.11	-2.19	0.84	0.859847
1855	2R_DroMel_CAF1	6,971,718 – 6,971,820	- - - "knownCDS=Parent=FBtr0088139;Name=E(Pc)-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7776-RA" - - - - -	3081	6,971,718 – 6,971,820	+	6	111	77.01	-2.82	0.34	0.892490
1855	2R_DroMel_CAF1	6,971,718 – 6,971,820		3082	6,971,718 – 6,971,820	-	6	111	77.01	-2.30	0.36	0.546061
1856	2R_DroMel_CAF1	6,972,781 – 6,972,875	- - - - - - - - -	3083	6,972,781 – 6,972,875	-	6	94	87.59	-2.15	0.82	0.741685
1857	2R_DroMel_CAF1	6,973,807 – 6,973,900	- - - "knownCDS=Parent=FBtr0088140;Name=E(Pc)-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7776-RB" - - - - -	3084	6,973,807 – 6,973,900	-	5	93	95.81	-1.88	0.94	0.996654
1858	2R_DroMel_CAF1	6,974,284 – 6,974,390	- - - "knownCDS=Parent=FBtr0088140;Name=E(Pc)-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7776-RB" - - - - -	3085	6,974,284 – 6,974,390	-	6	106	87.61	-2.43	0.79	0.717069
1859	2R_DroMel_CAF1	6,985,201 – 6,985,294	- - - - - - - - -	3086	6,985,201 – 6,985,294	+	6	120	80.25	-2.29	0.53	0.749408
1859	2R_DroMel_CAF1	6,985,201 – 6,985,294	- - - - - - - - -	3087	6,985,201 – 6,985,294	-	6	120	80.25	-4.00	0.55	0.985234
1860	2R_DroMel_CAF1	6,990,760 – 6,990,859	- - - - - - - - -	3088	6,990,760 – 6,990,859	-	4	102	87.60	-1.53	0.86	0.680610
1861	2R_DroMel_CAF1	6,994,089 – 6,994,216	- - - - - - - - -	3089	6,994,089 – 6,994,186	-	6	118	76.41	-2.44	0.67	0.986337
1861	2R_DroMel_CAF1	6,994,089 – 6,994,216	- - - - - - - - -	3090	6,994,119 – 6,994,216	-	6	110	76.70	-2.52	0.50	0.964840
1862	2R_DroMel_CAF1	6,995,595 – 6,995,685	- - - - - - - - -	3091	6,995,595 – 6,995,685	-	5	92	90.42	-2.20	0.70	0.627210
1863	2R_DroMel_CAF1	6,996,599 – 6,996,689	- - - - - - - - -	3092	6,996,599 – 6,996,689	-	4	90	84.00	-1.67	0.68	0.625519
1864	2R_DroMel_CAF1	6,997,219 – 6,997,314	- - - - - - - - -	3093	6,997,219 – 6,997,314	+	6	108	76.51	-2.52	0.47	0.955502
1864	2R_DroMel_CAF1	6,997,219 – 6,997,314	- - - - - - - - -	3094	6,997,219 – 6,997,314	-	6	108	76.51	-1.96	0.45	0.572586
1865	2R_DroMel_CAF1	6,999,481 – 6,999,571	- - - - - - - - -	3095	6,999,481 – 6,999,571	+	5	90	93.00	-2.17	0.83	0.983051
1866	2R_DroMel_CAF1	7,008,506 – 7,008,615	- - - - - - - - -	3096	7,008,506 – 7,008,615	-	6	120	75.49	-1.60	0.61	0.830385
1867	2R_DroMel_CAF1	7,010,065 – 7,010,171	- - - - - - - - -	3097	7,010,065 – 7,010,171	+	6	117	80.54	-2.48	0.68	0.923654
1867	2R_DroMel_CAF1	7,010,065 – 7,010,171	- - - - - - - - -	3098	7,010,065 – 7,010,171	-	6	117	80.54	-2.26	0.75	0.922148
1868	2R_DroMel_CAF1	7,024,262 – 7,024,366	- - - - - - - - -	3099	7,024,262 – 7,024,366	-	5	110	76.86	-1.53	0.06	0.708909
1869	2R_DroMel_CAF1	7,027,964 – 7,028,056	- - - - - - - - -	3100	7,027,964 – 7,028,056	+	6	97	76.33	-0.80	0.74	0.539989
1869	2R_DroMel_CAF1	7,027,964 – 7,028,056	- - - - - - - - -	3101	7,027,964 – 7,028,056	-	6	97	76.33	-1.18	0.64	0.500000
1870	2R_DroMel_CAF1	7,031,071 – 7,031,167	- - - - - - - - -	3102	7,031,071 – 7,031,167	+	6	110	76.44	-1.96	0.48	0.695755
1871	2R_DroMel_CAF1	7,038,035 – 7,038,126	- - - - - - - - -	3103	7,038,035 – 7,038,126	+	6	91	83.36	-2.04	0.85	0.874332
1872	2R_DroMel_CAF1	7,042,310 – 7,042,430	- - - "knownCDS=Parent=FBtr0088096;Name=en-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9015-RA" - - - - -	3104	7,042,310 – 7,042,430	+	6	120	82.63	-1.61	0.66	0.500000
1873	2R_DroMel_CAF1	7,050,078 – 7,050,168	- - - - - - - - -	3105	7,050,078 – 7,050,168	-	6	96	81.01	-1.49	0.66	0.601082
1874	2R_DroMel_CAF1	7,050,409 – 7,050,506	- - - - - - - - -	3106	7,050,409 – 7,050,506	-	5	102	86.97	-1.91	0.74	0.769307
1875	2R_DroMel_CAF1	7,055,973 – 7,056,079	- - - - - - - - -	3107	7,055,973 – 7,056,079	-	6	106	93.33	-2.71	0.78	0.611904
1876	2R_DroMel_CAF1	7,060,584 – 7,060,676	- - - - - - - - -	3108	7,060,584 – 7,060,676	-	6	109	83.09	-2.26	0.60	0.524953
1877	2R_DroMel_CAF1	7,060,744 – 7,060,837	- - - - - - - - -	3109	7,060,744 – 7,060,837	-	6	102	80.27	-1.33	0.66	0.540730
1878	2R_DroMel_CAF1	7,066,063 – 7,066,169	- - - - - - - - -	3110	7,066,063 – 7,066,169	+	3	107	79.26	-2.63	0.60	0.961354
1878	2R_DroMel_CAF1	7,066,063 – 7,066,169	- - - - - - - - -	3111	7,066,063 – 7,066,169	-	3	107	79.26	-2.30	0.57	0.772065
1879	2R_DroMel_CAF1	7,070,737 – 7,070,834	- - - - - - - - -	3112	7,070,737 – 7,070,834	+	6	105	82.42	-1.49	0.77	0.615709
1880	2R_DroMel_CAF1	7,073,459 – 7,073,556	- - - - - - - - -	3113	7,073,459 – 7,073,556	-	4	104	76.55	-2.41	0.63	0.990458
1881	2R_DroMel_CAF1	7,078,971 – 7,079,063	- - - - - - - - -	3114	7,078,971 – 7,079,063	+	5	119	66.34	-1.68	0.52	0.815629
1882	2R_DroMel_CAF1	7,085,095 – 7,085,218	- - - - - - - - -	3115	7,085,095 – 7,085,200	+	6	120	89.81	-1.58	0.88	0.751896
				3116	7,085,122 – 7,085,218	+	6	117	81.25	-1.56	0.73	0.710514
				3117	7,085,122 – 7,085,218	-	6	117	81.25	-2.32	0.67	0.866171
1883	2R_DroMel_CAF1	7,087,322 – 7,087,423	- - - - - - - - -	3118	7,087,322 – 7,087,423	-	5	101	90.30	-2.44	0.82	0.992328
1884	2R_DroMel_CAF1	7,107,650 – 7,107,758	- - - "knownCDS=Parent=FBtr0088091;Name=tou-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10897-RA" - - - - -	3119	7,107,650 – 7,107,758	+	6	120	76.35	-2.20	0.47	0.866615
1884	2R_DroMel_CAF1	7,107,650 – 7,107,758		3120	7,107,650 – 7,107,758	-	6	120	76.35	-2.60	0.45	0.963541
1885	2R_DroMel_CAF1	7,108,257 – 7,108,361	- - - - - - - - -	3121	7,108,257 – 7,108,361	+	6	104	88.16	-2.64	0.78	0.720044
1886	2R_DroMel_CAF1	7,108,539 – 7,108,630	- - - - - - - - -	3122	7,108,539 – 7,108,630	-	4	95	91.71	-2.34	0.73	0.686418
1887	2R_DroMel_CAF1	7,110,768 – 7,110,902	- - - - - - - - -	3123	7,110,768 – 7,110,862	-	5	120	73.92	-2.01	0.44	0.899602
1887	2R_DroMel_CAF1	7,110,768 – 7,110,902	- - - - - - - - -	3124	7,110,795 – 7,110,902	-	5	120	78.98	-2.28	0.39	0.858423
1888	2R_DroMel_CAF1	7,116,860 – 7,116,955	- - - - - - - - -	3125	7,116,860 – 7,116,955	-	4	117	68.02	-2.10	0.41	0.587480
1889	2R_DroMel_CAF1	7,121,936 – 7,122,030	- - - - - - - - -	3126	7,121,936 – 7,122,030	+	5	109	80.36	-2.18	0.37	0.611956
1890	2R_DroMel_CAF1	7,122,221 – 7,122,319	- - - - - - - - -	3127	7,122,221 – 7,122,319	+	6	119	67.71	-1.60	0.44	0.637291
1891	2R_DroMel_CAF1	7,124,996 – 7,125,275	- - - - - - - - -	3128	7,124,996 – 7,125,088	-	6	98	83.10	-4.71	0.82	0.977554
				3129	7,125,016 – 7,125,113	-	6	114	80.62	-1.13	0.72	0.510495
				3130	7,125,088 – 7,125,178	+	6	106	86.43	-2.01	0.78	0.535793
				3131	7,125,113 – 7,125,215	-	6	105	87.17	-2.05	0.79	0.570762
				3132	7,125,178 – 7,125,275	+	6	105	84.99	-2.93	0.63	0.500000
1892	2R_DroMel_CAF1	7,126,341 – 7,126,475	- - - - - - - - -	3133	7,126,341 – 7,126,441	-	3	102	75.09	-2.15	0.53	0.704310
1892	2R_DroMel_CAF1	7,126,341 – 7,126,475	- - - - - - - - -	3134	7,126,374 – 7,126,475	-	5	110	76.47	-1.81	0.56	0.720468
1893	2R_DroMel_CAF1	7,131,971 – 7,132,233	- - - - - - - - -	3135	7,131,971 – 7,132,079	+	5	120	90.16	-2.24	0.80	0.973938
				3136	7,131,971 – 7,132,079	-	5	120	90.16	-1.60	0.76	0.594457
				3137	7,132,079 – 7,132,193	+	5	114	91.02	-1.99	0.75	0.790717
				3138	7,132,119 – 7,132,233	+	5	114	92.17	-1.89	0.72	0.500000
				3139	7,132,119 – 7,132,233	-	5	114	92.17	-1.84	0.81	0.902164
1894	2R_DroMel_CAF1	7,136,628 – 7,136,723	- - - - - - - - -	3140	7,136,628 – 7,136,723	+	6	95	79.60	-1.73	0.59	0.625437
1895	2R_DroMel_CAF1	7,140,087 – 7,140,211	- - - "knownCDS=Parent=FBtr0088089;Name=CG9005-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9005-RA" - - - - -	3141	7,140,087 – 7,140,189	+	6	117	77.38	-1.87	0.64	0.915715
				3142	7,140,087 – 7,140,189	-	6	117	77.38	-3.61	0.71	0.988764
				3143	7,140,121 – 7,140,211	-	6	105	76.71	-1.91	0.64	0.939545
1896	2R_DroMel_CAF1	7,148,958 – 7,149,091	- - - - - - - - -	3144	7,148,958 – 7,149,066	-	5	112	84.90	-1.41	0.93	0.595115
1896	2R_DroMel_CAF1	7,148,958 – 7,149,091	- - - - - - - - -	3145	7,148,996 – 7,149,091	+	5	97	90.93	-2.03	0.92	0.997663
1897	2R_DroMel_CAF1	7,152,234 – 7,152,371	- - - - - - - - -	3146	7,152,234 – 7,152,350	+	5	116	91.97	-2.53	0.88	0.999406
1897	2R_DroMel_CAF1	7,152,234 – 7,152,371	- - - - - - - - -	3147	7,152,274 – 7,152,371	-	5	109	91.10	-1.11	0.95	0.576856
1898	2R_DroMel_CAF1	7,152,936 – 7,153,031	- - "RNAmicro=f:7152936_t:7153030_strand:+_p:0.573790" - - - - - -	3148	7,152,936 – 7,153,031	+	6	95	91.30	-1.50	0.86	0.566321
1898	2R_DroMel_CAF1	7,152,936 – 7,153,031		3149	7,152,936 – 7,153,031	-	6	95	91.30	-3.06	0.97	0.999947
1899	2R_DroMel_CAF1	7,155,214 – 7,155,313	- - - - - - - - -	3150	7,155,214 – 7,155,313	+	6	120	81.07	-1.55	0.63	0.535214
1900	2R_DroMel_CAF1	7,156,098 – 7,156,194	- - - - - - - - -	3151	7,156,098 – 7,156,194	+	5	96	96.04	-2.94	0.89	0.999652
1900	2R_DroMel_CAF1	7,156,098 – 7,156,194	- - - - - - - - -	3152	7,156,098 – 7,156,194	-	5	96	96.04	-2.90	0.94	0.999940
1901	2R_DroMel_CAF1	7,168,262 – 7,168,363	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000072; Name=Dmel_Arg_TCT_14000072;TFAMID=DmelRTCT-7168346" "tRNAscan=type:Arg:anticodon:TCT f:7168273_t:7168356_strand=-_cove=82.67" - - "Rfam=AC005749.1/32735-32807_RF00005;tRNA;\|2e-20" - - - "Flybase=FBgn0050254:CR30254:cytosolic_tRNA_gene\|3e-37"	3153	7,168,262 – 7,168,363	+	6	120	83.98	-1.42	0.90	0.642162
1902	2R_DroMel_CAF1	7,169,216 – 7,169,333	- - - - - - - - -	3154	7,169,216 – 7,169,333	-	5	120	86.46	-1.80	0.72	0.652323
1903	2R_DroMel_CAF1	7,172,464 – 7,172,555	- - - - - - - - -	3155	7,172,464 – 7,172,555	+	4	95	91.35	-1.41	0.92	0.663136
1904	2R_DroMel_CAF1	7,173,499 – 7,173,597	- - - - - - - - -	3156	7,173,499 – 7,173,597	-	6	118	77.83	-2.02	0.56	0.861963
1905	2R_DroMel_CAF1	7,177,126 – 7,177,220	- - - - - - - - -	3157	7,177,126 – 7,177,220	-	6	97	88.94	-1.35	0.90	0.651988
1906	2R_DroMel_CAF1	7,179,693 – 7,179,798	- - - - - - - - -	3158	7,179,693 – 7,179,798	+	4	111	83.36	-1.72	0.68	0.656961
1907	2R_DroMel_CAF1	7,186,380 – 7,186,495	- - - - - - - - -	3159	7,186,380 – 7,186,495	+	5	120	83.16	-2.34	0.58	0.780238
1907	2R_DroMel_CAF1	7,186,380 – 7,186,495	- - - - - - - - -	3160	7,186,380 – 7,186,495	-	5	120	83.16	-1.93	0.63	0.644827
1908	2R_DroMel_CAF1	7,190,122 – 7,190,234	- - - "knownCDS=Parent=FBtr0088073, FBtr0088074;Name=CG30035-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30035-RA, FlyBase+Annotation+IDs:CG30035-RB" - - - - -	3161	7,190,122 – 7,190,234	+	6	119	74.35	-1.20	0.62	0.519118
1909	2R_DroMel_CAF1	7,193,095 – 7,193,215	- - - "knownCDS=Parent=FBtr0088075, FBtr0088076;Name=CG8234-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8234-RA, FlyBase+Annotation+IDs:CG8234-RB" - - - - -	3162	7,193,095 – 7,193,215	-	4	120	83.06	-2.07	0.68	0.864297
1910	2R_DroMel_CAF1	7,193,360 – 7,193,480	- - - "knownCDS=Parent=FBtr0088075, FBtr0088076;Name=CG8234-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8234-RA, FlyBase+Annotation+IDs:CG8234-RB" - - - - -	3163	7,193,360 – 7,193,480	+	4	120	84.58	-2.00	0.77	0.876267
1911	2R_DroMel_CAF1	7,193,708 – 7,193,828	- - - "knownCDS=Parent=FBtr0088075, FBtr0088076;Name=CG8234-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8234-RA, FlyBase+Annotation+IDs:CG8234-RB" - - - - -	3164	7,193,708 – 7,193,828	+	4	120	82.78	-1.78	0.63	0.606789
1912	2R_DroMel_CAF1	7,193,930 – 7,194,039	- - - - - - - - -	3165	7,193,930 – 7,194,039	+	3	120	81.41	-1.79	0.63	0.523547
1913	2R_DroMel_CAF1	7,195,180 – 7,195,297	- - - - - - - - -	3166	7,195,180 – 7,195,297	-	5	118	89.86	-1.73	0.72	0.543719
1914	2R_DroMel_CAF1	7,200,478 – 7,200,578	- - - "knownCDS=Parent=FBtr0088084;Name=CG13196-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13196-RA" - - - - -	3167	7,200,478 – 7,200,578	+	6	100	74.60	-2.87	0.47	0.995108
1915	2R_DroMel_CAF1	7,201,204 – 7,201,308	- - - - - - - - -	3168	7,201,204 – 7,201,308	-	6	114	78.24	-1.57	0.65	0.775513
1916	2R_DroMel_CAF1	7,204,528 – 7,204,663	- - - - - - - - -	3169	7,204,528 – 7,204,629	+	5	102	78.08	-2.04	0.62	0.909164
				3170	7,204,553 – 7,204,663	+	5	111	81.07	-2.41	0.65	0.955891
				3171	7,204,553 – 7,204,663	-	5	111	81.07	-2.44	0.50	0.867812
1917	2R_DroMel_CAF1	7,205,355 – 7,205,475	- - - "knownCDS=Parent=FBtr0088082, FBtr0088083;Name=wal-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8996-RA, FlyBase+Annotation+IDs:CG8996-RB" - - - - -	3172	7,205,355 – 7,205,475	+	6	120	78.72	-1.29	0.66	0.601288
1918	2R_DroMel_CAF1	7,221,503 – 7,221,604	- - - - - - - - -	3173	7,221,503 – 7,221,604	+	5	106	88.16	-2.31	0.86	0.992987
1919	2R_DroMel_CAF1	7,226,242 – 7,226,336	- - - - - - - - -	3174	7,226,242 – 7,226,336	-	6	97	76.49	-1.79	0.51	0.595685
1920	2R_DroMel_CAF1	7,227,381 – 7,227,476	- - - - - - - - -	3175	7,227,381 – 7,227,476	-	6	104	78.03	-1.66	0.60	0.725667
1921	2R_DroMel_CAF1	7,228,468 – 7,228,562	- - - - - - - - -	3176	7,228,468 – 7,228,562	-	5	94	96.49	-1.90	0.99	0.998723
1922	2R_DroMel_CAF1	7,245,732 – 7,245,825	- - - - - - - - -	3177	7,245,732 – 7,245,825	+	6	109	76.36	-2.00	0.60	0.937058
1923	2R_DroMel_CAF1	7,246,974 – 7,247,080	- - - - - - - - -	3178	7,246,974 – 7,247,080	-	6	120	83.72	-2.66	0.62	0.596571
1924	2R_DroMel_CAF1	7,247,764 – 7,247,908	- - - - - - - - -	3179	7,247,764 – 7,247,873	+	6	111	70.36	-2.00	0.72	0.989954
				3180	7,247,796 – 7,247,908	+	6	116	80.58	-2.00	0.82	0.908041
				3181	7,247,796 – 7,247,908	-	6	116	80.58	-1.16	0.74	0.560148
1925	2R_DroMel_CAF1	7,250,267 – 7,250,358	- - - - - - - - -	3182	7,250,267 – 7,250,358	-	5	91	87.85	-1.60	0.77	0.624519
1926	2R_DroMel_CAF1	7,259,943 – 7,260,040	- - - - - - - - -	3183	7,259,943 – 7,260,040	-	4	108	75.69	-2.08	0.70	0.981463
1927	2R_DroMel_CAF1	7,260,879 – 7,260,973	- - - - - - - - -	3184	7,260,879 – 7,260,973	-	6	95	81.17	-2.44	0.62	0.856240
1928	2R_DroMel_CAF1	7,263,065 – 7,263,159	- - - - - - - - -	3185	7,263,065 – 7,263,159	+	5	94	95.53	-1.90	0.82	0.907207
1928	2R_DroMel_CAF1	7,263,065 – 7,263,159	- - - - - - - - -	3186	7,263,065 – 7,263,159	-	5	94	95.53	-2.99	0.89	0.999768
1929	2R_DroMel_CAF1	7,277,067 – 7,277,160	- - - - - - - - -	3187	7,277,067 – 7,277,160	+	6	106	82.67	-1.38	0.75	0.524352
1929	2R_DroMel_CAF1	7,277,067 – 7,277,160	- - - - - - - - -	3188	7,277,067 – 7,277,160	-	6	106	82.67	-2.38	0.84	0.925528
1930	2R_DroMel_CAF1	7,278,678 – 7,278,777	- - - - - - - - -	3189	7,278,678 – 7,278,777	+	5	107	88.57	-2.15	0.67	0.545588
1930	2R_DroMel_CAF1	7,278,678 – 7,278,777	- - - - - - - - -	3190	7,278,678 – 7,278,777	-	5	107	88.57	-2.32	0.77	0.950653
1931	2R_DroMel_CAF1	7,282,440 – 7,282,539	- - - - - - - - -	3191	7,282,440 – 7,282,539	+	6	104	79.40	-2.02	0.58	0.799603
1931	2R_DroMel_CAF1	7,282,440 – 7,282,539	- - - - - - - - -	3192	7,282,440 – 7,282,539	-	6	104	79.40	-1.91	0.58	0.751874
1932	2R_DroMel_CAF1	7,284,342 – 7,284,442	- - - "knownCDS=Parent=FBtr0088029;Name=CG13193-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13193-RA" - - - - -	3193	7,284,342 – 7,284,442	-	6	114	78.70	-2.98	0.44	0.946925
1933	2R_DroMel_CAF1	7,298,572 – 7,298,692	- - - - - - - - -	3194	7,298,572 – 7,298,662	+	4	102	81.94	-2.75	0.79	0.994597
1933	2R_DroMel_CAF1	7,298,572 – 7,298,692	- - - - - - - - -	3195	7,298,596 – 7,298,692	+	5	100	82.08	-3.06	0.61	0.986107
1934	2R_DroMel_CAF1	7,299,990 – 7,300,087	- - - - - - - - -	3196	7,299,990 – 7,300,087	+	5	113	80.96	-2.13	0.74	0.940128
1934	2R_DroMel_CAF1	7,299,990 – 7,300,087	- - - - - - - - -	3197	7,299,990 – 7,300,087	-	5	113	80.96	-1.93	0.65	0.790834
1935	2R_DroMel_CAF1	7,301,314 – 7,301,410	- - - - - - - - -	3198	7,301,314 – 7,301,410	+	6	97	85.86	-2.68	0.75	0.695794
1936	2R_DroMel_CAF1	7,301,513 – 7,301,637	- - - - - - - - -	3199	7,301,513 – 7,301,607	-	5	96	88.71	-2.15	0.79	0.939805
1936	2R_DroMel_CAF1	7,301,513 – 7,301,637	- - - - - - - - -	3200	7,301,542 – 7,301,637	-	5	101	91.58	-2.69	0.77	0.978710
1937	2R_DroMel_CAF1	7,302,456 – 7,302,600	- - - - - - - - -	3201	7,302,456 – 7,302,561	-	5	105	95.24	-1.99	0.78	0.761353
1937	2R_DroMel_CAF1	7,302,456 – 7,302,600	- - - - - - - - -	3202	7,302,496 – 7,302,600	-	5	105	95.03	-1.42	0.90	0.880598
1938	2R_DroMel_CAF1	7,311,663 – 7,311,770	- - - - - - - - -	3203	7,311,663 – 7,311,770	+	6	110	80.53	-1.50	0.75	0.752541
1939	2R_DroMel_CAF1	7,317,519 – 7,317,610	- - - - - - - - -	3204	7,317,519 – 7,317,610	+	5	98	93.92	-2.52	0.75	0.859484
1939	2R_DroMel_CAF1	7,317,519 – 7,317,610	- - - - - - - - -	3205	7,317,519 – 7,317,610	-	5	98	93.92	-2.47	0.80	0.980420
1940	2R_DroMel_CAF1	7,320,316 – 7,320,411	- - - - - - - - -	3206	7,320,316 – 7,320,411	-	6	98	90.76	-1.81	0.90	0.939362
1941	2R_DroMel_CAF1	7,327,150 – 7,327,315	- - - "knownCDS=Parent=FBtr0088030;Name=ths-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12443-RA" - - - - -	3207	7,327,150 – 7,327,249	+	6	101	80.07	-2.39	0.52	0.789908
				3208	7,327,184 – 7,327,286	+	6	102	83.99	-2.42	0.69	0.640530
				3209	7,327,212 – 7,327,315	+	6	103	81.42	-2.80	0.74	0.931693
				3210	7,327,212 – 7,327,315	-	6	103	81.42	-1.94	0.69	0.780597
1942	2R_DroMel_CAF1	7,329,466 – 7,329,558	- - - - - - - - -	3211	7,329,466 – 7,329,558	-	5	92	100.00	-1.87	1.00	0.981935
1943	2R_DroMel_CAF1	7,332,404 – 7,332,499	- - - - - - - - -	3212	7,332,404 – 7,332,499	+	5	107	77.09	-2.14	0.37	0.883243
1944	2R_DroMel_CAF1	7,337,598 – 7,337,700	- - - - - - - - -	3213	7,337,598 – 7,337,700	+	5	104	75.19	-1.60	0.03	0.810809
1945	2R_DroMel_CAF1	7,343,087 – 7,343,187	- - - - - - - - -	3214	7,343,087 – 7,343,187	-	5	100	96.20	-1.78	0.88	0.964168
1946	2R_DroMel_CAF1	7,344,022 – 7,344,142	- - - "knownCDS=Parent=FBtr0088064;Name=CG8991-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8991-RA" - - - - -	3215	7,344,022 – 7,344,142	+	6	120	82.17	-2.30	0.55	0.526248
1946	2R_DroMel_CAF1	7,344,022 – 7,344,142		3216	7,344,022 – 7,344,142	-	6	120	82.17	-2.24	0.56	0.543640
1947	2R_DroMel_CAF1	7,357,020 – 7,357,127	- - - - - - - - -	3217	7,357,020 – 7,357,127	-	5	108	88.45	-1.59	0.72	0.500000
1948	2R_DroMel_CAF1	7,359,887 – 7,360,034	- - - - - - - - -	3218	7,359,887 – 7,359,995	-	5	110	88.27	-1.93	0.77	0.841006
1948	2R_DroMel_CAF1	7,359,887 – 7,360,034	- - - - - - - - -	3219	7,359,916 – 7,360,034	+	5	119	84.92	-1.71	0.76	0.672181
1949	2R_DroMel_CAF1	7,366,215 – 7,366,404	- - "RNAmicro=f:7366290_t:7366404_strand:+_p:0.999107" - - - - - -	3220	7,366,215 – 7,366,330	-	3	115	97.68	-1.73	0.93	0.624144
				3221	7,366,250 – 7,366,369	-	3	120	90.81	-2.57	0.85	0.878534
				3222	7,366,290 – 7,366,404	+	3	115	89.24	-2.44	0.93	0.970290
1950	2R_DroMel_CAF1	7,367,216 – 7,367,456	- - - "knownCDS=Parent=FBtr0088032;Name=CG8271-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8271-RA" - - - - -	3223	7,367,216 – 7,367,336	+	3	120	91.67	-1.47	0.95	0.650219
1950	2R_DroMel_CAF1	7,367,216 – 7,367,456		3224	7,367,336 – 7,367,456	+	3	120	96.67	-1.58	0.93	0.510985
1951	2R_DroMel_CAF1	7,368,844 – 7,369,000	- - - - - - - - -	3225	7,368,844 – 7,368,934	-	4	105	65.33	-1.69	0.52	0.910211
				3226	7,368,894 – 7,369,000	+	5	120	71.96	-1.76	0.34	0.647703
				3227	7,368,894 – 7,369,000	-	5	120	71.96	-1.79	0.41	0.696653
1952	2R_DroMel_CAF1	7,370,634 – 7,370,726	- - - "knownCDS=Parent=FBtr0088033;Name=Mtor-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8274-RA" - - - - -	3228	7,370,634 – 7,370,726	+	6	98	69.95	-1.57	0.46	0.541796
1953	2R_DroMel_CAF1	7,375,893 – 7,375,997	- - - "knownCDS=Parent=FBtr0088033;Name=Mtor-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8274-RA" - - - - -	3229	7,375,893 – 7,375,997	-	6	120	71.32	-1.45	0.61	0.851211
1954	2R_DroMel_CAF1	7,379,334 – 7,379,425	- - - - - - - - -	3230	7,379,334 – 7,379,425	+	5	93	91.04	-1.58	0.83	0.840640
1954	2R_DroMel_CAF1	7,379,334 – 7,379,425	- - - - - - - - -	3231	7,379,334 – 7,379,425	-	5	93	91.04	-2.37	0.91	0.999508
1955	2R_DroMel_CAF1	7,390,738 – 7,390,857	- - - "knownCDS=Parent=FBtr0088060;Name=CG13185-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13185-RA" - - - - -	3232	7,390,738 – 7,390,857	-	6	120	75.03	-1.54	0.57	0.660632
1956	2R_DroMel_CAF1	7,391,274 – 7,391,378	- - - "knownCDS=Parent=FBtr0088060;Name=CG13185-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13185-RA" - - - - -	3233	7,391,274 – 7,391,378	+	6	104	76.73	-1.16	0.69	0.669731
1957	2R_DroMel_CAF1	7,392,776 – 7,392,922	- - - "knownCDS=Parent=FBtr0088060;Name=CG13185-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13185-RA" - - - - -	3234	7,392,776 – 7,392,884	+	6	108	83.33	-2.21	0.69	0.659046
				3235	7,392,776 – 7,392,884	-	6	108	83.33	-2.01	0.67	0.575057
				3236	7,392,816 – 7,392,922	+	6	108	83.06	-2.42	0.60	0.581714
				3237	7,392,816 – 7,392,922	-	6	108	83.06	-1.65	0.68	0.513361
1958	2R_DroMel_CAF1	7,397,863 – 7,397,983	- - - "knownCDS=Parent=FBtr0088060;Name=CG13185-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13185-RA" - - - - -	3238	7,397,863 – 7,397,983	+	6	120	80.44	-2.16	0.57	0.746095
1959	2R_DroMel_CAF1	7,401,277 – 7,401,386	- - - "knownCDS=Parent=FBtr0088060;Name=CG13185-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13185-RA" - - - - -	3239	7,401,277 – 7,401,386	+	6	111	77.83	-1.10	0.74	0.690467
1960	2R_DroMel_CAF1	7,407,890 – 7,407,990	- - - - - - - - -	3240	7,407,890 – 7,407,990	+	5	111	74.93	-1.75	0.43	0.526102
1961	2R_DroMel_CAF1	7,409,019 – 7,409,115	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002410; Name=snoRNA:Z1;Dbxref=FB:FBgn0015543,GB:NR_001718,GB:U46015" - - - "Rfam=AC005466.5/37447-37519_RF00346;snoZ1;\|2e-35" "Noncode=n429,u399,AE003824,Z1,Drosophila_melanogaster_(fruit_fly)\|3e-36" - - "Flybase=FBgn0015543:snoRNA:Z1:nuclear_small_nucleolar_RNA_gene\|2e-37"	3241	7,409,019 – 7,409,115	+	6	103	82.38	-2.87	0.68	0.872616
1961	2R_DroMel_CAF1	7,409,019 – 7,409,115		3242	7,409,019 – 7,409,115	-	6	103	82.38	-2.52	0.70	0.839395
1962	2R_DroMel_CAF1	7,409,490 – 7,409,690	- - - "knownCDS=Parent=FBtr0088036;Name=Ef1alpha48D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8280-RB" - - - - -	3243	7,409,490 – 7,409,610	-	6	120	94.28	-1.69	0.85	0.634004
				3244	7,409,530 – 7,409,650	+	6	120	94.28	-1.79	0.83	0.570188
				3245	7,409,570 – 7,409,690	+	6	120	94.61	-1.83	0.86	0.854667
1963	2R_DroMel_CAF1	7,410,009 – 7,410,129	- - - "knownCDS=Parent=FBtr0088036;Name=Ef1alpha48D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8280-RB" - - - - -	3246	7,410,009 – 7,410,129	+	6	120	93.78	-1.21	0.93	0.848317
1964	2R_DroMel_CAF1	7,410,753 – 7,410,873	- - - "knownCDS=Parent=FBtr0088036;Name=Ef1alpha48D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8280-RB" - - - - -	3247	7,410,753 – 7,410,873	+	6	120	95.00	-1.18	0.95	0.918701
1965	2R_DroMel_CAF1	7,420,586 – 7,420,696	- - - - - - - - -	3248	7,420,586 – 7,420,696	+	6	112	79.84	-2.15	0.56	0.783628
1966	2R_DroMel_CAF1	7,426,106 – 7,426,215	- - - - - - - - -	3249	7,426,106 – 7,426,215	-	5	109	95.23	-1.35	0.93	0.894978
1967	2R_DroMel_CAF1	7,433,128 – 7,433,238	- - - - - - - - -	3250	7,433,128 – 7,433,238	+	5	120	93.30	-1.61	0.89	0.961090
1968	2R_DroMel_CAF1	7,433,275 – 7,433,515	- - - - - - - - -	3251	7,433,275 – 7,433,395	+	5	120	89.79	-1.91	0.80	0.910583
				3252	7,433,275 – 7,433,395	-	5	120	89.79	-2.32	0.74	0.897616
				3253	7,433,315 – 7,433,435	+	5	120	88.97	-2.30	0.80	0.976669
				3254	7,433,315 – 7,433,435	-	5	120	88.97	-2.62	0.78	0.980976
				3255	7,433,355 – 7,433,475	+	5	120	94.80	-1.30	0.85	0.579177
				3256	7,433,355 – 7,433,475	-	5	120	94.80	-1.71	0.88	0.965409
				3257	7,433,395 – 7,433,515	+	5	120	96.50	-1.18	0.93	0.632905
				3258	7,433,395 – 7,433,515	-	5	120	96.50	-1.43	0.89	0.840893
1969	2R_DroMel_CAF1	7,434,566 – 7,434,656	- - - - - - - - -	3259	7,434,566 – 7,434,656	-	6	98	78.14	-1.40	0.67	0.746930
1970	2R_DroMel_CAF1	7,436,919 – 7,437,024	- - - - - - - - -	3260	7,436,919 – 7,437,024	+	5	110	79.76	-2.42	0.81	0.988232
1970	2R_DroMel_CAF1	7,436,919 – 7,437,024	- - - - - - - - -	3261	7,436,919 – 7,437,024	-	5	110	79.76	-1.53	0.66	0.506567
1971	2R_DroMel_CAF1	7,449,072 – 7,449,234	- - - - - - - - -	3262	7,449,072 – 7,449,178	-	6	106	89.87	-1.94	0.82	0.632892
				3263	7,449,104 – 7,449,209	+	5	105	96.95	-2.00	0.97	0.998632
				3264	7,449,104 – 7,449,209	-	5	105	96.95	-1.74	0.94	0.988879
				3265	7,449,138 – 7,449,234	+	5	96	96.66	-2.00	1.01	0.999433
1972	2R_DroMel_CAF1	7,450,402 – 7,450,500	- - - - - - - - -	3266	7,450,402 – 7,450,500	-	6	103	80.93	-3.06	0.42	0.758264
1973	2R_DroMel_CAF1	7,451,133 – 7,451,234	- - - - - - - - -	3267	7,451,133 – 7,451,234	-	5	117	92.55	-1.43	0.80	0.553379
1974	2R_DroMel_CAF1	7,461,017 – 7,461,116	- - - - - - - - -	3268	7,461,017 – 7,461,116	-	5	99	93.48	-1.94	0.91	0.996982
1975	2R_DroMel_CAF1	7,465,381 – 7,465,472	- - - - - - - - -	3269	7,465,381 – 7,465,472	+	6	91	96.04	-1.12	0.93	0.802955
1976	2R_DroMel_CAF1	7,466,681 – 7,466,811	- - - - - - - - -	3270	7,466,681 – 7,466,788	-	6	118	74.45	-2.16	0.42	0.853420
1976	2R_DroMel_CAF1	7,466,681 – 7,466,811	- - - - - - - - -	3271	7,466,714 – 7,466,811	+	6	117	79.50	-2.01	0.64	0.876800
1977	2R_DroMel_CAF1	7,467,008 – 7,467,122	- - - - - - - - -	3272	7,467,008 – 7,467,122	-	5	117	88.27	-1.72	0.74	0.646984
1978	2R_DroMel_CAF1	7,467,155 – 7,467,247	- - - - - - - - -	3273	7,467,155 – 7,467,247	-	5	92	92.38	-1.89	0.77	0.801576
1979	2R_DroMel_CAF1	7,473,820 – 7,473,911	- - - - - - - - -	3274	7,473,820 – 7,473,911	+	6	95	75.15	-1.50	0.56	0.553162
1980	2R_DroMel_CAF1	7,476,634 – 7,476,729	- - - - - - - - -	3275	7,476,634 – 7,476,729	+	6	99	86.36	-2.53	0.77	0.679201
1981	2R_DroMel_CAF1	7,478,393 – 7,478,523	- - - - - - - - -	3276	7,478,393 – 7,478,513	+	6	120	77.68	-0.96	0.87	0.687553
1981	2R_DroMel_CAF1	7,478,393 – 7,478,523	- - - - - - - - -	3277	7,478,433 – 7,478,523	+	6	109	71.11	-0.73	0.71	0.518802
1982	2R_DroMel_CAF1	7,478,728 – 7,478,843	- - - "knownCDS=Parent=FBtr0088039, FBtr0088040;Name=CG13188-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13188-RA, FlyBase+Annotation+IDs:CG13188-RB" - - - - -	3278	7,478,728 – 7,478,843	-	6	120	80.09	-1.33	0.66	0.562789
1983	2R_DroMel_CAF1	7,481,850 – 7,481,953	- - - "knownCDS=Parent=FBtr0088039;Name=CG13188-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13188-RA" - - - - -	3279	7,481,850 – 7,481,953	+	4	115	85.47	-2.28	0.76	0.935558
1983	2R_DroMel_CAF1	7,481,850 – 7,481,953		3280	7,481,850 – 7,481,953	-	4	115	85.47	-2.57	0.75	0.965195
1984	2R_DroMel_CAF1	7,487,005 – 7,487,100	- - - - - - - - -	3281	7,487,005 – 7,487,100	-	6	120	71.62	-1.69	0.51	0.770626
1985	2R_DroMel_CAF1	7,487,460 – 7,487,559	- - - - - - - - -	3282	7,487,460 – 7,487,559	+	5	113	75.64	-1.48	0.65	0.616249
1986	2R_DroMel_CAF1	7,488,027 – 7,488,144	- - - "knownCDS=Parent=FBtr0088041, FBtr0088042;Name=CG8290-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8290-RB, FlyBase+Annotation+IDs:CG8290-RA" - - - - -	3283	7,488,027 – 7,488,144	-	6	117	79.54	-1.85	0.59	0.705390
1987	2R_DroMel_CAF1	7,492,183 – 7,492,277	- - - "knownCDS=Parent=FBtr0088042;Name=CG8290-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8290-RA" - - - - -	3284	7,492,183 – 7,492,277	-	3	94	94.33	-2.10	0.83	0.581591
1988	2R_DroMel_CAF1	7,494,187 – 7,494,307	- - - "knownCDS=Parent=FBtr0088050;Name=CG30036-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30036-RA" - - - - -	3285	7,494,187 – 7,494,307	+	3	120	79.41	-1.29	0.76	0.500000
1989	2R_DroMel_CAF1	7,495,629 – 7,495,749	- - - "knownCDS=Parent=FBtr0088049;Name=CG30037-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30037-RA" - - - - -	3286	7,495,629 – 7,495,749	-	5	120	93.33	-1.84	0.78	0.753183
1990	2R_DroMel_CAF1	7,499,736 – 7,499,856	- - - "knownCDS=Parent=FBtr0088046;Name=RnrS-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8975-RA" - - - - -	3287	7,499,736 – 7,499,856	-	6	120	82.56	-2.43	0.71	0.825174
1991	2R_DroMel_CAF1	7,500,829 – 7,500,929	- - - "knownCDS=Parent=FBtr0088046;Name=RnrS-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8975-RA" - - - - -	3288	7,500,829 – 7,500,929	+	6	101	82.26	-2.30	0.56	0.561278
1992	2R_DroMel_CAF1	7,514,910 – 7,515,023	- - - - - - - - -	3289	7,514,910 – 7,515,023	+	5	114	83.07	-1.69	0.67	0.572431
1993	2R_DroMel_CAF1	7,516,169 – 7,516,259	- - - - - - - - -	3290	7,516,169 – 7,516,259	+	6	104	81.55	-2.03	0.66	0.758623
1994	2R_DroMel_CAF1	7,517,725 – 7,517,820	- - - - - - - - -	3291	7,517,725 – 7,517,820	+	6	117	79.57	-1.80	0.72	0.878519
1994	2R_DroMel_CAF1	7,517,725 – 7,517,820	- - - - - - - - -	3292	7,517,725 – 7,517,820	-	6	117	79.57	-1.78	0.74	0.884782
1995	2R_DroMel_CAF1	7,518,740 – 7,518,848	- - - "knownCDS=Parent=FBtr0088028;Name=otk-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8967-RA" - - - - -	3293	7,518,740 – 7,518,848	+	6	111	78.97	-1.95	0.58	0.802148
1996	2R_DroMel_CAF1	7,522,885 – 7,522,979	- - - - - - - - -	3294	7,522,885 – 7,522,979	+	5	99	95.02	-1.66	0.88	0.955738
1996	2R_DroMel_CAF1	7,522,885 – 7,522,979	- - - - - - - - -	3295	7,522,885 – 7,522,979	-	5	99	95.02	-1.25	0.95	0.858603
1997	2R_DroMel_CAF1	7,523,402 – 7,523,495	- - - - - - - - -	3296	7,523,402 – 7,523,495	+	6	94	84.29	-1.83	0.74	0.556858
1998	2R_DroMel_CAF1	7,525,442 – 7,525,558	- - "RNAmicro=f:7525467_t:7525557_strand:+_p:0.863796" - - - - - -	3297	7,525,442 – 7,525,538	+	3	96	67.36	-3.42	0.41	0.986935
				3298	7,525,442 – 7,525,538	-	3	96	67.36	-3.28	0.64	1.000000
				3299	7,525,467 – 7,525,558	+	3	91	82.84	-3.69	0.86	0.995086
				3300	7,525,467 – 7,525,558	-	3	91	82.84	-2.35	0.67	0.855616
1999	2R_DroMel_CAF1	7,529,632 – 7,529,738	- - - - - - - - -	3301	7,529,632 – 7,529,738	+	6	106	76.07	-1.30	0.67	0.766378
2000	2R_DroMel_CAF1	7,530,192 – 7,530,294	- - - - - - - - -	3302	7,530,192 – 7,530,294	+	6	111	81.59	-2.98	0.50	0.797607
2001	2R_DroMel_CAF1	7,531,103 – 7,531,198	- - - - - - - - -	3303	7,531,103 – 7,531,198	+	6	103	77.82	-1.64	0.64	0.823557
2002	2R_DroMel_CAF1	7,537,269 – 7,537,359	- - - - - - - - -	3304	7,537,269 – 7,537,359	+	3	91	93.38	-1.91	0.86	0.566386
2003	2R_DroMel_CAF1	7,540,419 – 7,540,539	- - - "knownCDS=Parent=FBtr0088027;Name=CG8964-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8964-RA" - - - - -	3305	7,540,419 – 7,540,539	-	6	120	79.61	-1.65	0.63	0.705536
2004	2R_DroMel_CAF1	7,543,487 – 7,543,664	- - - - - - - - -	3306	7,543,487 – 7,543,592	+	5	107	95.27	-1.41	0.94	0.940054
				3307	7,543,487 – 7,543,592	-	5	107	95.27	-1.16	0.90	0.587044
				3308	7,543,516 – 7,543,627	+	5	118	94.55	-2.64	0.87	0.999134
				3309	7,543,516 – 7,543,627	-	5	118	94.55	-1.34	0.90	0.843688
				3310	7,543,554 – 7,543,664	+	5	117	90.06	-1.29	0.88	0.627330
2005	2R_DroMel_CAF1	7,549,720 – 7,549,862	- - - - - - - - -	3311	7,549,720 – 7,549,830	+	4	120	69.63	-2.38	0.68	0.999592
				3312	7,549,720 – 7,549,830	-	4	120	69.63	-1.88	0.57	0.954008
				3313	7,549,760 – 7,549,862	+	5	112	81.19	-1.92	0.74	0.861474
				3314	7,549,760 – 7,549,862	-	5	112	81.19	-1.87	0.63	0.698259
2006	2R_DroMel_CAF1	7,550,004 – 7,550,094	- - - - - - - - -	3315	7,550,004 – 7,550,094	-	4	90	92.59	-1.91	0.82	0.783162
2007	2R_DroMel_CAF1	7,551,420 – 7,551,574	- - - "knownCDS=Parent=FBtr0087975;Name=CG8321-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8321-RA" - - - - -	3316	7,551,420 – 7,551,534	-	6	114	72.81	-1.79	0.46	0.680614
2007	2R_DroMel_CAF1	7,551,420 – 7,551,574		3317	7,551,454 – 7,551,574	-	6	120	78.50	-1.52	0.58	0.514973
2008	2R_DroMel_CAF1	7,553,668 – 7,553,774	- - - "knownCDS=Parent=FBtr0087976;Name=128up-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8340-RA" - - - - -	3318	7,553,668 – 7,553,774	+	6	120	78.29	-1.78	0.63	0.845639
2008	2R_DroMel_CAF1	7,553,668 – 7,553,774		3319	7,553,668 – 7,553,774	-	6	120	78.29	-1.74	0.56	0.625247
2009	2R_DroMel_CAF1	7,558,789 – 7,558,884	- - - - - - - - -	3320	7,558,789 – 7,558,884	-	4	100	83.05	-2.38	0.57	0.741736
2010	2R_DroMel_CAF1	7,559,298 – 7,559,391	- - - - - - - - -	3321	7,559,298 – 7,559,391	+	6	99	77.06	-1.72	0.59	0.801063
2010	2R_DroMel_CAF1	7,559,298 – 7,559,391	- - - - - - - - -	3322	7,559,298 – 7,559,391	-	6	99	77.06	-2.30	0.54	0.944051
2011	2R_DroMel_CAF1	7,564,999 – 7,565,154	- - - - - - - - -	3323	7,564,999 – 7,565,097	+	6	108	82.63	-2.41	0.70	0.807032
				3324	7,564,999 – 7,565,097	-	6	108	82.63	-3.53	0.73	0.936653
				3325	7,565,025 – 7,565,130	+	6	105	81.87	-2.82	0.58	0.829557
				3326	7,565,025 – 7,565,130	-	6	105	81.87	-3.10	0.64	0.911865
				3327	7,565,057 – 7,565,154	+	6	101	79.79	-2.83	0.61	0.958517
				3328	7,565,057 – 7,565,154	-	6	101	79.79	-2.34	0.61	0.904360
2012	2R_DroMel_CAF1	7,567,755 – 7,567,864	- - - - - - - - -	3329	7,567,755 – 7,567,864	-	5	118	75.77	-1.97	0.25	0.884326
2013	2R_DroMel_CAF1	7,571,555 – 7,571,669	- - - - - - - - -	3330	7,571,555 – 7,571,669	+	3	114	91.10	-2.25	0.92	0.924230
2014	2R_DroMel_CAF1	7,585,286 – 7,585,413	- - - - - - - - -	3331	7,585,286 – 7,585,390	+	4	113	80.40	-1.94	0.66	0.818158
				3332	7,585,317 – 7,585,413	+	4	98	85.71	-2.98	0.84	0.994450
				3333	7,585,317 – 7,585,413	-	4	98	85.71	-1.70	0.74	0.707722
2015	2R_DroMel_CAF1	7,587,373 – 7,587,472	- - - - - - - - -	3334	7,587,373 – 7,587,472	+	5	105	81.58	-2.27	0.59	0.854154
2016	2R_DroMel_CAF1	7,591,374 – 7,591,508	- - - "knownCDS=texon10556;Parent=CG_RGUI_GID_mRNA_40003048, CG_DGIL_SNO_28355743" - - - - -	3335	7,591,374 – 7,591,475	-	6	103	83.08	-3.05	0.59	0.755292
				3336	7,591,409 – 7,591,508	+	5	105	86.06	-2.35	0.71	0.887754
				3337	7,591,409 – 7,591,508	-	5	105	86.06	-2.41	0.73	0.926203
2017	2R_DroMel_CAF1	7,591,820 – 7,591,940	- - - - - - - - -	3338	7,591,820 – 7,591,940	+	4	120	95.65	-2.10	0.97	0.957303
2018	2R_DroMel_CAF1	7,594,032 – 7,594,134	- - - - - - - - -	3339	7,594,032 – 7,594,134	+	6	118	75.57	-2.54	0.56	0.988322
2018	2R_DroMel_CAF1	7,594,032 – 7,594,134	- - - - - - - - -	3340	7,594,032 – 7,594,134	-	6	118	75.57	-2.23	0.59	0.975725
2019	2R_DroMel_CAF1	7,596,842 – 7,596,932	- - - - - - - - -	3341	7,596,842 – 7,596,932	+	6	104	81.99	-2.20	0.69	0.800469
2020	2R_DroMel_CAF1	7,598,840 – 7,598,978	- - - - - - - - -	3342	7,598,840 – 7,598,939	-	5	103	81.97	-1.76	0.68	0.666966
				3343	7,598,871 – 7,598,978	+	5	107	83.93	-3.24	0.73	0.995033
				3344	7,598,871 – 7,598,978	-	5	107	83.93	-3.33	0.63	0.981409
2021	2R_DroMel_CAF1	7,611,163 – 7,611,265	- - - - - - - - -	3345	7,611,163 – 7,611,265	+	3	114	83.94	-1.66	0.75	0.528895
2022	2R_DroMel_CAF1	7,628,624 – 7,628,724	- - - - - - - - -	3346	7,628,624 – 7,628,724	-	4	109	81.22	-2.14	0.55	0.580573
2023	2R_DroMel_CAF1	7,630,513 – 7,630,614	- - - - - - - - -	3347	7,630,513 – 7,630,614	+	5	102	76.94	-1.26	0.74	0.610599
2024	2R_DroMel_CAF1	7,632,534 – 7,632,651	- - - "knownCDS=Parent=FBtr0088021;Name=jeb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30040-RA" - - - - -	3348	7,632,534 – 7,632,651	+	6	117	78.22	-1.80	0.56	0.699891
2025	2R_DroMel_CAF1	7,635,462 – 7,635,616	- - - - - - - - -	3349	7,635,462 – 7,635,576	+	4	120	74.22	-2.14	0.48	0.705373
				3350	7,635,502 – 7,635,616	+	3	114	91.81	-2.10	0.95	0.929154
				3351	7,635,502 – 7,635,616	-	3	114	91.81	-1.76	0.90	0.653118
2026	2R_DroMel_CAF1	7,651,437 – 7,651,542	- - - - - - - - -	3352	7,651,437 – 7,651,542	+	3	107	76.49	-2.50	0.61	0.991578
2026	2R_DroMel_CAF1	7,651,437 – 7,651,542	- - - - - - - - -	3353	7,651,437 – 7,651,542	-	3	107	76.49	-2.54	0.51	0.802388
2027	2R_DroMel_CAF1	7,656,973 – 7,657,133	- - - "knownCDS=Parent=FBtr0087983;Name=CG8378-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8378-RA" - - - - -	3354	7,656,973 – 7,657,093	+	6	120	80.39	-1.66	0.58	0.500000
2027	2R_DroMel_CAF1	7,656,973 – 7,657,133		3355	7,657,013 – 7,657,133	+	6	120	79.67	-2.07	0.60	0.839184
2028	2R_DroMel_CAF1	7,662,823 – 7,662,914	- - - "knownCDS=Parent=FBtr0088017, FBtr0088018;Name=CG8878-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8878-RA, FlyBase+Annotation+IDs:CG8878-RB" - - - - -	3356	7,662,823 – 7,662,914	-	6	91	82.34	-1.34	0.74	0.532723
2029	2R_DroMel_CAF1	7,663,470 – 7,663,584	- - - "knownCDS=Parent=FBtr0088017, FBtr0088018;Name=CG8878-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8878-RA, FlyBase+Annotation+IDs:CG8878-RB" - - - - -	3357	7,663,470 – 7,663,584	-	6	120	78.88	-1.81	0.57	0.670622
2030	2R_DroMel_CAF1	7,665,692 – 7,665,800	- - - "knownCDS=Parent=FBtr0088018;Name=CG8878-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8878-RB" - - - - -	3358	7,665,692 – 7,665,800	+	6	111	80.26	-1.96	0.55	0.596938
2031	2R_DroMel_CAF1	7,674,762 – 7,674,866	- - "RNAmicro=f:7674762_t:7674881_strand:+_p:0.987124" - - - - - -	3359	7,674,762 – 7,674,866	+	6	120	73.79	-1.67	0.59	0.870283
2031	2R_DroMel_CAF1	7,674,762 – 7,674,866		3360	7,674,762 – 7,674,866	-	6	120	73.79	-2.78	0.73	0.993842
2032	2R_DroMel_CAF1	7,677,027 – 7,677,241	- - - - - - - - -	3361	7,677,027 – 7,677,136	-	6	120	73.41	-0.84	0.70	0.555390
2032	2R_DroMel_CAF1	7,677,027 – 7,677,241	- - - - - - - - -	3362	7,677,136 – 7,677,241	-	6	106	80.51	-1.88	0.85	0.901647
2033	2R_DroMel_CAF1	7,678,247 – 7,678,367	- - - "knownCDS=Parent=FBtr0088016;Name=CG8877-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8877-RA" - - - - -	3363	7,678,247 – 7,678,367	-	5	120	91.08	-1.73	0.80	0.837955
2034	2R_DroMel_CAF1	7,678,444 – 7,678,604	- - - "knownCDS=Parent=FBtr0088016;Name=CG8877-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8877-RA" - - - - -	3364	7,678,444 – 7,678,564	+	5	120	88.50	-2.37	0.71	0.828627
				3365	7,678,484 – 7,678,604	+	5	120	91.67	-2.67	0.75	0.940731
				3366	7,678,484 – 7,678,604	-	5	120	91.67	-1.95	0.73	0.581261
2035	2R_DroMel_CAF1	7,678,752 – 7,678,848	- - - - - - - - -	3367	7,678,752 – 7,678,848	-	3	96	95.83	-1.64	0.94	0.608905
2036	2R_DroMel_CAF1	7,679,832 – 7,679,941	- - - - - - - - -	3368	7,679,832 – 7,679,941	-	5	120	69.53	-1.73	0.26	0.500000
2037	2R_DroMel_CAF1	7,680,975 – 7,681,065	- - - - - - - - -	3369	7,680,975 – 7,681,065	+	4	94	78.28	-1.79	0.65	0.728611
2038	2R_DroMel_CAF1	7,683,672 – 7,683,775	- - - "knownCDS=Parent=FBtr0088013, FBtr0088014, FBtr0088015;Name=Oda-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16747-RA, FlyBase+Annotation+IDs:CG16747-RC, FlyBase+Annotation+IDs:CG16747-RB" - - - - -	3370	7,683,672 – 7,683,775	-	6	106	81.70	-1.77	0.66	0.651654
2039	2R_DroMel_CAF1	7,683,855 – 7,684,099	- - - "knownCDS=Parent=FBtr0088013, FBtr0088014, FBtr0088015;Name=Oda-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16747-RA, FlyBase+Annotation+IDs:CG16747-RC, FlyBase+Annotation+IDs:CG16747-RB" - - - - -	3371	7,683,855 – 7,683,966	+	6	111	81.80	-1.28	0.72	0.520966
				3372	7,683,855 – 7,683,966	-	6	111	81.80	-2.30	0.76	0.885031
				3373	7,683,886 – 7,684,006	+	6	120	91.24	-1.48	0.89	0.777026
				3374	7,683,926 – 7,684,046	-	6	120	95.00	-1.35	0.89	0.773034
				3375	7,684,006 – 7,684,099	+	6	120	79.85	-1.21	0.67	0.521597
2040	2R_DroMel_CAF1	7,686,031 – 7,686,172	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002248; Name=dme-mir-281-2" - "RNAmicro=f:7686060_t:7686179_strand:+_p:0.998384" - "Rfam=AC007475.7/163679-163603_RF00249;mir-46;\|1e-37" - "miRBase=dme-mir-281-2\|4e-48" - "Flybase=FBgn0082176:mir-281-2:microRNA_encoding_gene\|3e-07"	3376	7,686,031 – 7,686,134	+	6	120	80.69	-1.19	0.79	0.594021
				3377	7,686,031 – 7,686,134	-	6	120	80.69	-2.54	0.74	0.937211
				3378	7,686,060 – 7,686,172	+	6	120	79.43	-2.15	0.86	0.950366
				3379	7,686,060 – 7,686,172	-	6	120	79.43	-3.88	0.86	0.966708
2041	2R_DroMel_CAF1	7,686,243 – 7,686,385	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002251; Name=dme-mir-281-1" - "RNAmicro=f:7686281_t:7686400_strand:+_p:0.982272" - "Rfam=AC007475.7/163897-163823_RF00249;mir-46;\|2e-36" - "miRBase=dme-mir-281-1\|7e-47" - "Flybase=FBgn0082176:mir-281-2:microRNA_encoding_gene\|3e-07"	3380	7,686,243 – 7,686,359	+	6	120	76.33	-2.26	0.76	0.983187
				3381	7,686,243 – 7,686,359	-	6	120	76.33	-3.83	0.91	0.951907
				3382	7,686,281 – 7,686,385	+	6	120	80.57	-2.84	0.89	0.973136
				3383	7,686,281 – 7,686,385	-	6	120	80.57	-4.43	0.90	0.970982
2042	2R_DroMel_CAF1	7,686,454 – 7,686,569	- - - - - - - - -	3384	7,686,454 – 7,686,548	-	5	95	73.21	-2.87	0.44	0.999372
2042	2R_DroMel_CAF1	7,686,454 – 7,686,569	- - - - - - - - -	3385	7,686,473 – 7,686,569	-	3	109	80.25	-2.08	0.87	0.983512
2043	2R_DroMel_CAF1	7,689,124 – 7,689,235	- - - - - - - - -	3386	7,689,124 – 7,689,235	-	4	111	87.24	-2.08	0.68	0.755596
2044	2R_DroMel_CAF1	7,708,089 – 7,708,179	- - - "knownCDS=Parent=FBtr0087993;Name=Cyp6t3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8457-RA" - - - - -	3387	7,708,089 – 7,708,179	+	6	90	80.86	-1.30	0.77	0.640121
2045	2R_DroMel_CAF1	7,712,981 – 7,713,129	- - - "knownCDS=Parent=FBtr0088008;Name=CG8858-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8858-RA" - - - - -	3388	7,712,981 – 7,713,098	+	6	117	78.92	-2.07	0.54	0.777784
2045	2R_DroMel_CAF1	7,712,981 – 7,713,129		3389	7,713,021 – 7,713,129	+	6	108	76.54	-2.22	0.37	0.550950
2046	2R_DroMel_CAF1	7,713,668 – 7,713,788	- - - "knownCDS=Parent=FBtr0088008;Name=CG8858-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8858-RA" - - - - -	3390	7,713,668 – 7,713,788	-	6	120	75.39	-1.94	0.41	0.500000
2047	2R_DroMel_CAF1	7,715,685 – 7,715,786	- - - - - - - - -	3391	7,715,685 – 7,715,786	+	5	115	72.61	-1.79	0.47	0.712047
2048	2R_DroMel_CAF1	7,717,799 – 7,717,889	- - - - - - - - -	3392	7,717,799 – 7,717,889	+	6	96	79.16	-1.53	0.64	0.670464
2049	2R_DroMel_CAF1	7,718,949 – 7,719,078	- - - - - - - - -	3393	7,718,949 – 7,719,041	+	5	101	79.50	-2.18	0.65	0.938540
				3394	7,718,949 – 7,719,041	-	5	101	79.50	-1.96	0.55	0.701358
				3395	7,718,968 – 7,719,078	+	5	114	82.17	-1.82	0.61	0.572946
2050	2R_DroMel_CAF1	7,720,012 – 7,720,114	- - - - - - - - -	3396	7,720,012 – 7,720,114	+	6	104	82.42	-1.87	0.72	0.712491
2050	2R_DroMel_CAF1	7,720,012 – 7,720,114	- - - - - - - - -	3397	7,720,012 – 7,720,114	-	6	104	82.42	-1.36	0.75	0.540790
2051	2R_DroMel_CAF1	7,721,926 – 7,722,086	- - - - - - - - -	3398	7,721,926 – 7,722,046	+	5	120	83.28	-2.55	0.65	0.935536
				3399	7,721,926 – 7,722,046	-	5	120	83.28	-2.47	0.53	0.713718
				3400	7,721,966 – 7,722,086	+	5	120	79.72	-2.39	0.56	0.941110
2052	2R_DroMel_CAF1	7,723,910 – 7,724,009	- - - - - - - - -	3401	7,723,910 – 7,724,009	-	6	105	71.93	-1.90	0.38	0.617596
2053	2R_DroMel_CAF1	7,724,063 – 7,724,194	- - - - - - - - -	3402	7,724,063 – 7,724,164	-	6	119	81.56	-3.21	0.49	0.857799
2053	2R_DroMel_CAF1	7,724,063 – 7,724,194	- - - - - - - - -	3403	7,724,085 – 7,724,194	-	6	114	79.87	-2.31	0.67	0.927657
2054	2R_DroMel_CAF1	7,726,769 – 7,726,969	- - - - - - - - -	3404	7,726,769 – 7,726,889	-	5	120	81.39	-1.63	0.94	0.844014
				3405	7,726,809 – 7,726,929	+	5	120	95.25	-1.37	0.93	0.909589
				3406	7,726,809 – 7,726,929	-	5	120	95.25	-1.92	0.97	0.998941
				3407	7,726,849 – 7,726,969	+	5	120	94.58	-1.34	0.86	0.696951
2055	2R_DroMel_CAF1	7,728,121 – 7,728,212	- - - - - - - - -	3408	7,728,121 – 7,728,212	+	5	93	90.10	-1.34	0.84	0.578018
2056	2R_DroMel_CAF1	7,729,141 – 7,729,233	- - - - - - - - -	3409	7,729,141 – 7,729,233	+	6	105	78.61	-2.09	0.52	0.745102
2056	2R_DroMel_CAF1	7,729,141 – 7,729,233	- - - - - - - - -	3410	7,729,141 – 7,729,233	-	6	105	78.61	-2.84	0.48	0.956807
2057	2R_DroMel_CAF1	7,730,298 – 7,730,392	- - - - - - - - -	3411	7,730,298 – 7,730,392	+	3	94	83.40	-1.84	0.70	0.605269
2057	2R_DroMel_CAF1	7,730,298 – 7,730,392	- - - - - - - - -	3412	7,730,298 – 7,730,392	-	3	94	83.40	-1.56	0.84	0.669661
2058	2R_DroMel_CAF1	7,730,727 – 7,730,818	- - - - - - - - -	3413	7,730,727 – 7,730,818	+	6	92	81.04	-1.23	0.69	0.500000
2058	2R_DroMel_CAF1	7,730,727 – 7,730,818	- - - - - - - - -	3414	7,730,727 – 7,730,818	-	6	92	81.04	-1.80	0.73	0.808285
2059	2R_DroMel_CAF1	7,736,690 – 7,736,783	- - - - - - - - -	3415	7,736,690 – 7,736,783	-	5	94	84.03	-1.86	0.62	0.514828
2060	2R_DroMel_CAF1	7,738,516 – 7,738,623	- - - - - - - - -	3416	7,738,516 – 7,738,623	+	3	108	79.61	-3.17	0.77	0.998714
2061	2R_DroMel_CAF1	7,740,814 – 7,740,919	- - - "knownCDS=Parent=FBtr0088003;Name=CG8854-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8854-RA" - - - - -	3417	7,740,814 – 7,740,919	+	6	117	81.54	-1.93	0.61	0.625345
2062	2R_DroMel_CAF1	7,741,826 – 7,741,958	- - - "knownCDS=Parent=FBtr0088003;Name=CG8854-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8854-RA" - - - - -	3418	7,741,826 – 7,741,935	+	6	113	74.64	-1.05	0.66	0.521343
				3419	7,741,826 – 7,741,935	-	6	113	74.64	-2.01	0.51	0.897156
				3420	7,741,866 – 7,741,958	-	6	98	78.48	-1.59	0.66	0.801985
2063	2R_DroMel_CAF1	7,746,570 – 7,746,689	- - - - - - - - -	3421	7,746,570 – 7,746,689	+	3	119	71.10	-1.76	0.63	0.980597
2064	2R_DroMel_CAF1	7,753,126 – 7,753,229	- - - - - - - - -	3422	7,753,126 – 7,753,229	-	3	120	64.99	-2.77	0.41	0.959531
2065	2R_DroMel_CAF1	7,757,796 – 7,757,892	- - - - - - - - -	3423	7,757,796 – 7,757,892	+	3	113	82.30	-1.72	0.68	0.548494
2066	2R_DroMel_CAF1	7,758,758 – 7,758,899	- - - - - - - - -	3424	7,758,758 – 7,758,878	+	6	120	77.77	-1.05	0.68	0.500000
2066	2R_DroMel_CAF1	7,758,758 – 7,758,899	- - - - - - - - -	3425	7,758,798 – 7,758,899	+	6	120	64.26	-1.75	0.52	0.927972
2067	2R_DroMel_CAF1	7,759,481 – 7,759,577	- - - - - - - - -	3426	7,759,481 – 7,759,577	+	5	98	94.98	-1.27	0.86	0.595658
2068	2R_DroMel_CAF1	7,764,049 – 7,764,140	- - - - - - - - -	3427	7,764,049 – 7,764,140	-	3	98	62.14	-1.85	0.62	0.999561
2069	2R_DroMel_CAF1	7,764,707 – 7,764,833	- - - - - - - - -	3428	7,764,707 – 7,764,800	-	6	106	78.48	-1.90	0.53	0.643539
2069	2R_DroMel_CAF1	7,764,707 – 7,764,833	- - - - - - - - -	3429	7,764,732 – 7,764,833	-	6	113	75.81	-2.68	0.43	0.974715
2070	2R_DroMel_CAF1	7,766,136 – 7,766,242	- - - - - - - - -	3430	7,766,136 – 7,766,242	+	6	113	65.77	-2.05	0.38	0.919942
2071	2R_DroMel_CAF1	7,766,761 – 7,766,858	- - - - - - - - -	3431	7,766,761 – 7,766,858	-	5	97	85.35	-1.83	0.65	0.527808
2072	2R_DroMel_CAF1	7,768,745 – 7,768,844	- - - - - - - - -	3432	7,768,745 – 7,768,844	+	5	110	88.50	-1.44	0.78	0.522668
2073	2R_DroMel_CAF1	7,773,710 – 7,773,824	- - - - - - - - -	3433	7,773,710 – 7,773,824	+	3	120	79.66	-1.51	0.91	0.969688
2074	2R_DroMel_CAF1	7,778,185 – 7,778,316	- - - - - - - - -	3434	7,778,185 – 7,778,282	-	6	98	79.21	-2.27	0.46	0.598314
2074	2R_DroMel_CAF1	7,778,185 – 7,778,316	- - - - - - - - -	3435	7,778,210 – 7,778,316	+	5	106	87.48	-1.74	0.76	0.714246
2075	2R_DroMel_CAF1	7,778,973 – 7,779,071	- - - - - - - - -	3436	7,778,973 – 7,779,071	+	3	98	96.60	-2.67	0.98	0.983814
2075	2R_DroMel_CAF1	7,778,973 – 7,779,071	- - - - - - - - -	3437	7,778,973 – 7,779,071	-	3	98	96.60	-3.06	0.97	0.988376
2076	2R_DroMel_CAF1	7,798,277 – 7,798,371	- - - - - - - - -	3438	7,798,277 – 7,798,371	+	6	96	80.40	-2.25	0.62	0.861422
2076	2R_DroMel_CAF1	7,798,277 – 7,798,371	- - - - - - - - -	3439	7,798,277 – 7,798,371	-	6	96	80.40	-2.53	0.55	0.864493
2077	2R_DroMel_CAF1	7,799,022 – 7,799,152	- - - - - - - - -	3440	7,799,022 – 7,799,112	+	6	107	73.28	-1.92	0.68	0.982215
				3441	7,799,022 – 7,799,112	-	6	107	73.28	-2.02	0.51	0.933457
				3442	7,799,049 – 7,799,152	+	6	120	81.30	-2.07	0.62	0.741011
2078	2R_DroMel_CAF1	7,800,257 – 7,800,354	- - - - - - - - -	3443	7,800,257 – 7,800,354	+	5	109	83.38	-1.94	0.62	0.601497
2079	2R_DroMel_CAF1	7,802,043 – 7,802,157	- - - - - - - - -	3444	7,802,043 – 7,802,157	-	6	114	79.77	-1.76	0.58	0.611227
2080	2R_DroMel_CAF1	7,803,885 – 7,803,997	- - - - - - - - -	3445	7,803,885 – 7,803,997	+	5	112	92.06	-2.03	0.80	0.944058
2081	2R_DroMel_CAF1	7,806,971 – 7,807,085	- - - - - - - - -	3446	7,806,971 – 7,807,085	+	5	114	90.25	-2.33	0.85	0.995415
2081	2R_DroMel_CAF1	7,806,971 – 7,807,085	- - - - - - - - -	3447	7,806,971 – 7,807,085	-	5	114	90.25	-1.58	0.82	0.792202
2082	2R_DroMel_CAF1	7,808,651 – 7,808,745	- - - - - - - - -	3448	7,808,651 – 7,808,745	+	5	99	91.88	-1.86	0.83	0.950805
2082	2R_DroMel_CAF1	7,808,651 – 7,808,745	- - - - - - - - -	3449	7,808,651 – 7,808,745	-	5	99	91.88	-2.01	0.88	0.994398
2083	2R_DroMel_CAF1	7,815,012 – 7,815,124	- - - "knownCDS=Parent=FBtr0087972, FBtr0087973;Name=CG8850-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8850-RB, FlyBase+Annotation+IDs:CG8850-RA" - - - - -	3450	7,815,012 – 7,815,124	+	6	115	78.82	-1.19	0.65	0.500000
2084	2R_DroMel_CAF1	7,816,426 – 7,816,529	- - - "knownCDS=Parent=FBtr0087972, FBtr0087973;Name=CG8850-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8850-RB, FlyBase+Annotation+IDs:CG8850-RA" - - - - -	3451	7,816,426 – 7,816,529	+	6	110	79.06	-2.40	0.62	0.942751
2084	2R_DroMel_CAF1	7,816,426 – 7,816,529		3452	7,816,426 – 7,816,529	-	6	110	79.06	-2.18	0.75	0.949267
2085	2R_DroMel_CAF1	7,819,025 – 7,819,121	- - - "knownCDS=Parent=FBtr0089669;Name=SIP2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13164-RA" - - - - -	3453	7,819,025 – 7,819,121	-	3	96	78.02	-2.00	0.60	0.805215
2086	2R_DroMel_CAF1	7,824,709 – 7,824,804	- - - "knownCDS=Parent=FBtr0087893;Name=CG17739-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17739-RA" - - - - -	3454	7,824,709 – 7,824,804	-	6	95	85.68	-1.83	1.01	0.989047
2087	2R_DroMel_CAF1	7,829,425 – 7,829,545	- - - "knownCDS=Parent=FBtr0087894;Name=CG30203-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30203-RA" - - - - -	3455	7,829,425 – 7,829,545	-	3	120	96.11	-1.98	0.89	0.666577
2088	2R_DroMel_CAF1	7,837,313 – 7,837,416	- - - "knownCDS=Parent=FBtr0087896;Name=CG13163-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13163-RA" - - - - -	3456	7,837,313 – 7,837,416	+	6	105	76.66	-1.46	0.60	0.640692
2089	2R_DroMel_CAF1	7,842,991 – 7,843,104	- - - "knownCDS=Parent=FBtr0087897, FBtr0087898;Name=garz-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8487-RB, FlyBase+Annotation+IDs:CG8487-RA" - - - - -	3457	7,842,991 – 7,843,104	+	6	120	77.26	-1.47	0.59	0.544623
2090	2R_DroMel_CAF1	7,844,017 – 7,844,119	- - - "knownCDS=Parent=FBtr0087897, FBtr0087898;Name=garz-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8487-RB, FlyBase+Annotation+IDs:CG8487-RA" - - - - -	3458	7,844,017 – 7,844,119	+	6	105	79.81	-1.29	0.66	0.556720
2091	2R_DroMel_CAF1	7,845,522 – 7,845,621	- - - "knownCDS=Parent=FBtr0087897, FBtr0087898;Name=garz-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8487-RB, FlyBase+Annotation+IDs:CG8487-RA" - - - - -	3459	7,845,522 – 7,845,621	+	6	105	77.36	-1.09	0.77	0.751513
2092	2R_DroMel_CAF1	7,849,822 – 7,849,936	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000075; Name=Dmel_His_GTG_14000075;TFAMID=DmelHGTG-7849904" "tRNAscan=type:His:anticodon:GTG f:7849832_t:7849913_strand=-_cove=67.15" - - "Rfam=AC004311.1/36015-35944_RF00005;tRNA;\|8e-35" - - - "Flybase=FBgn0011878:transfer_RNA:his:48F:cytosolic_tRNA_gene\|1e-36"	3460	7,849,822 – 7,849,936	+	6	120	79.85	-1.59	0.80	0.847890
2093	2R_DroMel_CAF1	7,850,068 – 7,850,244	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000076; Name=Dmel_His_GTG_14000076;TFAMID=DmelHGTG-7850212" "tRNAscan=type:His:anticodon:GTG f:7850140_t:7850283_strand=-_cove=67.15" - - "Rfam=AC004311.1/36015-35944_RF00005;tRNA;\|1e-34" - - - "Flybase=FBgn0011878:transfer_RNA:his:48F:cytosolic_tRNA_gene\|2e-36"	3461	7,850,068 – 7,850,167	+	4	99	70.72	-1.05	0.91	0.987343
				3462	7,850,068 – 7,850,167	-	4	99	70.72	-1.51	0.88	0.993996
				3463	7,850,100 – 7,850,207	+	6	118	87.31	-1.82	0.94	0.959211
				3464	7,850,128 – 7,850,244	+	6	120	82.39	-1.70	0.81	0.749324
2094	2R_DroMel_CAF1	7,850,844 – 7,850,987	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000077; Name=Dmel_His_GTG_14000077;TFAMID=DmelHGTG-7850973" - - - "Rfam=AC004311.1/36015-35944_RF00005;tRNA;\|1e-34" - - - "Flybase=FBgn0011878:transfer_RNA:his:48F:cytosolic_tRNA_gene\|1e-36"	3465	7,850,844 – 7,850,951	+	6	111	81.48	-2.86	0.87	0.968344
				3466	7,850,844 – 7,850,951	-	6	111	81.48	-3.07	0.84	0.965353
				3467	7,850,874 – 7,850,987	+	6	119	82.15	-1.78	0.74	0.728350
				3468	7,850,874 – 7,850,987	-	6	119	82.15	-1.31	0.73	0.518323
2095	2R_DroMel_CAF1	7,851,725 – 7,851,842	- - - "knownCDS=Parent=FBtr0087899;Name=CG8490-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8490-RA" - - - - -	3469	7,851,725 – 7,851,842	-	6	120	82.66	-1.56	0.69	0.532523
2096	2R_DroMel_CAF1	7,852,322 – 7,852,467	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000078; Name=Dmel_His_GTG_14000078;TFAMID=DmelHGTG-7852325" "tRNAscan=type:His:anticodon:GTG f:7852324_t:7852397_strand=+_cove=67.15" - - "Rfam=AC004311.1/36015-35944_RF00005;tRNA;\|1e-34" - - - "Flybase=FBgn0011878:transfer_RNA:his:48F:cytosolic_tRNA_gene\|1e-36"	3470	7,852,322 – 7,852,441	+	6	120	91.75	-1.52	0.93	0.950048
				3471	7,852,322 – 7,852,441	-	6	120	91.75	-2.34	0.93	0.998659
				3472	7,852,362 – 7,852,467	+	5	118	74.53	-2.43	0.79	0.997895
				3473	7,852,362 – 7,852,467	-	5	118	74.53	-1.13	0.86	0.966430
2097	2R_DroMel_CAF1	7,852,595 – 7,852,751	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000290; Name=Dmel_Undet_???_14000290;TFAMID=Dmel????-7852640" "tRNAscan=type:Undet:anticodon:??? f:7852639_t:7852754_strand=+_cove=37.58" - - "Rfam=AC004311.1/36015-35944_RF00005;tRNA;\|2e-15" - - - "Flybase=FBgn0011878:transfer_RNA:his:48F:cytosolic_tRNA_gene\|2e-17"	3474	7,852,595 – 7,852,712	-	5	120	85.85	-1.72	0.67	0.500000
				3475	7,852,632 – 7,852,751	+	5	120	88.69	-1.66	0.91	0.938560
				3476	7,852,632 – 7,852,751	-	5	120	88.69	-2.39	0.84	0.993505
2098	2R_DroMel_CAF1	7,855,938 – 7,856,058	- - - "knownCDS=Parent=FBtr0087957, FBtr0087958, FBtr0087959, FBtr0087960;Name=CG8839-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8839-RA, FlyBase+Annotation+IDs:CG8839-RE, FlyBase+Annotation+IDs:CG8839-RD, FlyBase+Annotation+IDs:CG8839-RC" - - - - -	3477	7,855,938 – 7,856,058	-	6	120	82.39	-1.99	0.70	0.723038
2099	2R_DroMel_CAF1	7,858,491 – 7,858,581	- - - - - - - - -	3478	7,858,491 – 7,858,581	+	5	92	88.36	-2.28	0.73	0.867142
2099	2R_DroMel_CAF1	7,858,491 – 7,858,581	- - - - - - - - -	3479	7,858,491 – 7,858,581	-	5	92	88.36	-2.16	0.87	0.990423
2100	2R_DroMel_CAF1	7,860,028 – 7,860,138	- - - - - - - - -	3480	7,860,028 – 7,860,138	+	5	112	83.02	-1.99	0.63	0.687943
2101	2R_DroMel_CAF1	7,861,525 – 7,861,630	- - - "knownCDS=Parent=FBtr0087904;Name=CG13162-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13162-RA" - - - - -	3481	7,861,525 – 7,861,630	-	6	120	74.45	-1.77	0.61	0.924869
2102	2R_DroMel_CAF1	7,865,041 – 7,865,161	- - - "knownCDS=Parent=FBtr0087904;Name=CG13162-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13162-RA" - - - - -	3482	7,865,041 – 7,865,161	-	4	120	77.08	-2.42	0.50	0.851313
2103	2R_DroMel_CAF1	7,868,923 – 7,869,108	- - - "knownCDS=Parent=FBtr0087905;Name=CG30047-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30047-RA" - - - - -	3483	7,868,923 – 7,869,028	-	5	105	84.38	-1.64	0.69	0.530217
				3484	7,868,957 – 7,869,068	-	5	111	90.00	-1.73	0.77	0.732823
				3485	7,868,988 – 7,869,108	+	4	120	91.94	-2.12	0.78	0.794790
				3486	7,868,988 – 7,869,108	-	4	120	91.94	-2.54	0.79	0.904562
2104	2R_DroMel_CAF1	7,870,008 – 7,870,106	- - - "knownCDS=Parent=FBtr0087905;Name=CG30047-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30047-RA" - - - - -	3487	7,870,008 – 7,870,106	+	5	98	80.82	-2.06	0.72	0.913503
2105	2R_DroMel_CAF1	7,870,898 – 7,870,997	- - - "knownCDS=Parent=FBtr0087905;Name=CG30047-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30047-RA" - - - - -	3488	7,870,898 – 7,870,997	-	6	110	80.45	-1.60	0.85	0.833240
2106	2R_DroMel_CAF1	7,880,227 – 7,880,423	- - - "knownCDS=Parent=FBtr0087908;Name=CG33013-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33013-RB" - - - - -	3489	7,880,227 – 7,880,319	+	3	95	73.76	-2.48	0.54	0.981390
				3490	7,880,227 – 7,880,319	-	3	95	73.76	-1.08	0.75	0.582577
				3491	7,880,319 – 7,880,423	+	6	105	72.79	-1.60	0.58	0.849063
2107	2R_DroMel_CAF1	7,894,806 – 7,894,923	- - - "knownCDS=Parent=FBtr0087914;Name=CG30042-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30042-RA" - - - - -	3492	7,894,806 – 7,894,923	-	6	117	81.71	-1.53	0.65	0.530647
2108	2R_DroMel_CAF1	7,897,369 – 7,897,524	- - - - - - - - -	3493	7,897,369 – 7,897,465	+	5	97	93.88	-2.10	0.85	0.988971
				3494	7,897,369 – 7,897,465	-	5	97	93.88	-2.35	0.80	0.965117
				3495	7,897,428 – 7,897,524	+	6	101	81.81	-3.52	0.57	0.936537
2109	2R_DroMel_CAF1	7,898,833 – 7,898,934	- - - - - - - - -	3496	7,898,833 – 7,898,934	+	6	102	84.50	-1.98	0.75	0.600926
2110	2R_DroMel_CAF1	7,911,340 – 7,911,434	- - - "knownCDS=Parent=FBtr0087919;Name=CG30048-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30048-RA" - - - - -	3497	7,911,340 – 7,911,434	-	5	94	89.15	-1.41	0.80	0.562155
2111	2R_DroMel_CAF1	7,914,410 – 7,914,570	- - - "knownCDS=Parent=FBtr0087919, FBtr0100374;Name=CG30048-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30048-RA, FlyBase+Annotation+IDs:CG30048-RB" - - - - -	3498	7,914,410 – 7,914,530	-	5	120	87.83	-2.07	0.75	0.855023
2111	2R_DroMel_CAF1	7,914,410 – 7,914,570		3499	7,914,450 – 7,914,570	-	5	120	89.08	-1.34	0.82	0.514479
2112	2R_DroMel_CAF1	7,914,690 – 7,914,810	- - - "knownCDS=Parent=FBtr0087919, FBtr0100374;Name=CG30048-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30048-RA, FlyBase+Annotation+IDs:CG30048-RB" - - - - -	3500	7,914,690 – 7,914,810	-	5	120	91.00	-1.87	0.79	0.877429
2113	2R_DroMel_CAF1	7,915,778 – 7,915,893	- - - - - - - - -	3501	7,915,778 – 7,915,893	+	5	117	90.93	-2.19	0.96	0.999588
2114	2R_DroMel_CAF1	7,919,275 – 7,919,387	- - - "knownCDS=Parent=FBtr0087920;Name=CG8505-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8505-RA" - - - - -	3502	7,919,275 – 7,919,387	-	6	117	80.41	-1.34	0.64	0.500000
2115	2R_DroMel_CAF1	7,919,784 – 7,919,930	- - - - - - - - -	3503	7,919,784 – 7,919,878	+	5	94	93.01	-2.17	0.88	0.997096
				3504	7,919,784 – 7,919,878	-	5	94	93.01	-3.09	0.87	0.999779
				3505	7,919,838 – 7,919,930	+	6	117	80.20	-1.49	0.67	0.664424
2116	2R_DroMel_CAF1	7,926,938 – 7,927,030	- - - - - - - - -	3506	7,926,938 – 7,927,030	-	6	94	79.30	-0.98	0.73	0.500000
2117	2R_DroMel_CAF1	7,929,657 – 7,929,753	- - - - - - - - -	3507	7,929,657 – 7,929,753	+	5	96	91.61	-1.71	0.75	0.577296
2117	2R_DroMel_CAF1	7,929,657 – 7,929,753	- - - - - - - - -	3508	7,929,657 – 7,929,753	-	5	96	91.61	-1.59	0.88	0.932739
2118	2R_DroMel_CAF1	7,931,598 – 7,931,689	- - - - - - - - -	3509	7,931,598 – 7,931,689	+	6	106	83.14	-1.72	0.76	0.642079
2119	2R_DroMel_CAF1	7,938,224 – 7,938,364	- - - "knownCDS=Parent=FBtr0087954;Name=CG8834-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8834-RA" - - - - -	3510	7,938,224 – 7,938,324	+	6	110	83.11	-1.50	0.74	0.540339
2119	2R_DroMel_CAF1	7,938,224 – 7,938,364		3511	7,938,244 – 7,938,364	-	6	120	80.39	-1.14	0.69	0.500000
2120	2R_DroMel_CAF1	7,939,369 – 7,939,515	- - - - - - - - -	3512	7,939,369 – 7,939,482	+	5	118	80.34	-2.03	0.74	0.924035
				3513	7,939,369 – 7,939,482	-	5	118	80.34	-2.24	0.65	0.938503
				3514	7,939,403 – 7,939,515	+	5	112	90.54	-2.00	0.79	0.913560
				3515	7,939,403 – 7,939,515	-	5	112	90.54	-2.11	0.74	0.795063
2121	2R_DroMel_CAF1	7,946,109 – 7,946,209	- - - "knownCDS=Parent=FBtr0087952;Name=CG8831-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8831-RA" - - - - -	3516	7,946,109 – 7,946,209	+	6	100	87.00	-3.32	0.71	0.648548
2122	2R_DroMel_CAF1	7,947,622 – 7,947,724	- - - - - - - - -	3517	7,947,622 – 7,947,724	-	5	114	84.38	-1.74	0.70	0.608104
2123	2R_DroMel_CAF1	7,949,260 – 7,949,447	- - "RNAmicro=f:7949260_t:7949354_strand:+_p:0.741676" "knownCDS=Parent=FBtr0087950, FBtr0087951;Name=CG8830-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8830-RB, FlyBase+Annotation+IDs:CG8830-RA" - - - - -	3518	7,949,260 – 7,949,355	+	3	95	95.09	-1.69	0.98	0.773226
				3519	7,949,355 – 7,949,447	+	6	98	81.42	-2.75	0.57	0.846739
				3520	7,949,355 – 7,949,447	-	6	98	81.42	-2.00	0.65	0.746989
2124	2R_DroMel_CAF1	7,949,620 – 7,949,750	- - - "knownCDS=Parent=FBtr0087950, FBtr0087951;Name=CG8830-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8830-RB, FlyBase+Annotation+IDs:CG8830-RA" - - - - -	3521	7,949,620 – 7,949,735	+	6	115	76.77	-2.22	0.54	0.935125
				3522	7,949,620 – 7,949,735	-	6	115	76.77	-2.22	0.61	0.966924
				3523	7,949,660 – 7,949,750	+	6	103	77.58	-2.19	0.54	0.902733
				3524	7,949,660 – 7,949,750	-	6	103	77.58	-3.22	0.73	0.985802
2125	2R_DroMel_CAF1	7,953,741 – 7,953,837	- - - - - - - - -	3525	7,953,741 – 7,953,837	+	5	96	96.86	-2.65	0.92	0.999723
2126	2R_DroMel_CAF1	7,954,391 – 7,954,536	- - - - - - - - -	3526	7,954,391 – 7,954,496	-	5	105	93.71	-2.08	0.93	0.999082
2126	2R_DroMel_CAF1	7,954,391 – 7,954,536	- - - - - - - - -	3527	7,954,431 – 7,954,536	-	6	120	77.15	-1.74	0.73	0.943346
2127	2R_DroMel_CAF1	7,958,126 – 7,958,246	- - - - - - - - -	3528	7,958,126 – 7,958,246	+	5	120	85.64	-1.86	0.74	0.744402
2128	2R_DroMel_CAF1	7,960,616 – 7,960,724	- - - - - - - - -	3529	7,960,616 – 7,960,724	+	5	118	75.64	-1.78	0.55	0.695699
2128	2R_DroMel_CAF1	7,960,616 – 7,960,724	- - - - - - - - -	3530	7,960,616 – 7,960,724	-	5	118	75.64	-1.87	0.52	0.758294
2129	2R_DroMel_CAF1	7,961,343 – 7,961,434	- - - - - - - - -	3531	7,961,343 – 7,961,434	-	5	92	88.31	-2.83	0.76	0.983046
2130	2R_DroMel_CAF1	7,963,061 – 7,963,158	- - "RNAmicro=f:7963061_t:7963159_strand:+_p:0.923447" - - - - - -	3532	7,963,061 – 7,963,158	-	6	99	83.41	-1.80	0.69	0.545580
2131	2R_DroMel_CAF1	7,964,494 – 7,964,654	- - - "knownCDS=Parent=FBtr0100298, FBtr0100300;Name=Dyb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8529-RD, FlyBase+Annotation+IDs:CG8529-RE" - - - - -	3533	7,964,494 – 7,964,614	+	6	120	92.89	-1.12	0.98	0.930339
2131	2R_DroMel_CAF1	7,964,494 – 7,964,654		3534	7,964,534 – 7,964,654	+	6	120	93.72	-1.07	0.94	0.791634
2132	2R_DroMel_CAF1	7,966,059 – 7,966,168	- - - "knownCDS=Parent=FBtr0100300;Name=Dyb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8529-RE" - - - - -	3535	7,966,059 – 7,966,168	+	6	120	74.71	-1.10	0.71	0.780902
2133	2R_DroMel_CAF1	7,966,778 – 7,966,874	- - - - - - - - -	3536	7,966,778 – 7,966,874	+	6	98	81.13	-1.17	0.84	0.548430
2134	2R_DroMel_CAF1	7,967,578 – 7,967,681	- - - "knownCDS=Parent=FBtr0100298;Name=Dyb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8529-RD" - - - - -	3537	7,967,578 – 7,967,681	-	6	111	76.04	-1.69	0.51	0.509007
2135	2R_DroMel_CAF1	7,970,122 – 7,970,223	- - - - - - - - -	3538	7,970,122 – 7,970,223	+	6	112	76.41	-2.21	0.42	0.736873
2136	2R_DroMel_CAF1	7,973,592 – 7,973,685	- - - - - - - - -	3539	7,973,592 – 7,973,685	-	6	98	87.32	-1.92	0.83	0.664548
2137	2R_DroMel_CAF1	7,973,803 – 7,973,931	- - - - - - - - -	3540	7,973,803 – 7,973,907	+	3	116	85.55	-2.27	0.79	0.833064
2137	2R_DroMel_CAF1	7,973,803 – 7,973,931	- - - - - - - - -	3541	7,973,839 – 7,973,931	-	3	104	85.16	-1.26	0.89	0.598616
2138	2R_DroMel_CAF1	7,976,563 – 7,976,668	- - - - - - - - -	3542	7,976,563 – 7,976,668	-	6	115	78.13	-2.22	0.44	0.623747
2139	2R_DroMel_CAF1	7,982,982 – 7,983,082	- - - "knownCDS=Parent=FBtr0087948;Name=CG8828-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8828-RA" - - - - -	3543	7,982,982 – 7,983,082	+	6	100	82.00	-1.53	0.66	0.538439
2140	2R_DroMel_CAF1	7,984,467 – 7,984,619	- - - - - - - - -	3544	7,984,467 – 7,984,579	+	4	118	71.80	-1.91	0.58	0.937532
				3545	7,984,467 – 7,984,579	-	4	118	71.80	-1.92	0.67	0.985716
				3546	7,984,500 – 7,984,619	+	4	120	81.40	-1.84	0.79	0.854065
				3547	7,984,500 – 7,984,619	-	4	120	81.40	-1.87	0.84	0.895461
2141	2R_DroMel_CAF1	7,984,656 – 7,984,749	- - - "knownCDS=Parent=FBtr0087934;Name=CG8545-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8545-RA" - - - - -	3548	7,984,656 – 7,984,749	+	6	115	78.75	-1.52	0.65	0.723391
2142	2R_DroMel_CAF1	7,986,729 – 7,986,820	- - - "knownCDS=Parent=FBtr0087934;Name=CG8545-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8545-RA" - - - - -	3549	7,986,729 – 7,986,820	-	6	101	67.15	-1.98	0.39	0.893583
2143	2R_DroMel_CAF1	7,990,868 – 7,990,958	- - - - - - - - -	3550	7,990,868 – 7,990,958	+	6	109	81.25	-1.92	0.68	0.784309
2144	2R_DroMel_CAF1	7,991,528 – 7,991,626	- - - - - - - - -	3551	7,991,528 – 7,991,626	+	6	98	90.27	-2.79	0.79	0.738693
2145	2R_DroMel_CAF1	7,991,885 – 7,991,988	- - - - - - - - -	3552	7,991,885 – 7,991,988	-	6	115	74.72	-2.15	0.41	0.803762
2146	2R_DroMel_CAF1	8,006,840 – 8,006,954	- - - - - - - - -	3553	8,006,840 – 8,006,954	+	6	114	77.96	-2.33	0.55	0.934148
2147	2R_DroMel_CAF1	8,007,805 – 8,007,913	- - - - - - - - -	3554	8,007,805 – 8,007,913	+	5	116	70.16	-1.80	0.64	0.963614
2148	2R_DroMel_CAF1	8,008,646 – 8,008,736	- - - - - - - - -	3555	8,008,646 – 8,008,736	-	4	104	79.62	-2.50	0.52	0.812420
2149	2R_DroMel_CAF1	8,009,905 – 8,009,996	- - - - - - - - -	3556	8,009,905 – 8,009,996	+	6	102	75.70	-2.89	0.48	0.993078
2150	2R_DroMel_CAF1	8,013,598 – 8,013,691	- - - - - - - - -	3557	8,013,598 – 8,013,691	-	3	100	87.92	-3.16	0.69	0.839622
2151	2R_DroMel_CAF1	8,014,602 – 8,014,692	- - - - - - - - -	3558	8,014,602 – 8,014,692	+	5	111	69.61	-2.66	0.54	0.998925
2151	2R_DroMel_CAF1	8,014,602 – 8,014,692	- - - - - - - - -	3559	8,014,602 – 8,014,692	-	5	111	69.61	-1.80	0.32	0.642918
2152	2R_DroMel_CAF1	8,017,104 – 8,017,195	- - - - - - - - -	3560	8,017,104 – 8,017,195	-	5	91	81.21	-2.91	0.62	0.988969
2153	2R_DroMel_CAF1	8,022,585 – 8,022,679	- - - - - - - - -	3561	8,022,585 – 8,022,679	-	5	98	81.07	-1.82	0.69	0.757801
2154	2R_DroMel_CAF1	8,026,127 – 8,026,232	- - - - - - - - -	3562	8,026,127 – 8,026,232	+	3	120	85.15	-1.92	0.75	0.629111
2155	2R_DroMel_CAF1	8,036,700 – 8,036,820	- - - "knownCDS=Parent=FBtr0087940;Name=CG8569-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8569-RA" - - - - -	3563	8,036,700 – 8,036,820	+	4	120	87.50	-1.43	0.82	0.563842
2156	2R_DroMel_CAF1	8,039,767 – 8,039,897	- - - - - - - - -	3564	8,039,767 – 8,039,867	+	5	120	76.61	-2.05	0.51	0.874724
				3565	8,039,767 – 8,039,867	-	5	120	76.61	-1.88	0.40	0.629374
				3566	8,039,805 – 8,039,897	-	5	120	76.92	-1.83	0.39	0.536096
2157	2R_DroMel_CAF1	8,040,088 – 8,040,207	- - - - - - - - -	3567	8,040,088 – 8,040,207	-	5	120	78.54	-1.74	0.57	0.549001
2158	2R_DroMel_CAF1	8,040,800 – 8,040,914	- - - - - - - - -	3568	8,040,800 – 8,040,914	+	5	120	91.62	-1.46	0.89	0.894711
2159	2R_DroMel_CAF1	8,043,936 – 8,044,068	- - - - - - - - -	3569	8,043,936 – 8,044,028	+	4	96	90.28	-1.90	0.76	0.744353
				3570	8,043,950 – 8,044,068	+	5	120	82.44	-2.21	0.67	0.886516
				3571	8,043,950 – 8,044,068	-	5	120	82.44	-1.94	0.65	0.726411
2160	2R_DroMel_CAF1	8,045,228 – 8,045,336	- - - - - - - - -	3572	8,045,228 – 8,045,336	+	5	120	80.99	-2.10	0.57	0.754807
2161	2R_DroMel_CAF1	8,046,658 – 8,046,766	- - - - - - - - -	3573	8,046,658 – 8,046,766	-	5	120	75.98	-1.95	0.41	0.766476
2162	2R_DroMel_CAF1	8,047,016 – 8,047,121	- - - - - - - - -	3574	8,047,016 – 8,047,121	-	4	114	87.14	-1.84	0.65	0.588241
2163	2R_DroMel_CAF1	8,047,306 – 8,047,425	- - - - - - - - -	3575	8,047,306 – 8,047,425	+	5	120	82.07	-2.58	0.71	0.978477
2164	2R_DroMel_CAF1	8,047,917 – 8,048,032	- - - - - - - - -	3576	8,047,917 – 8,048,032	-	4	116	96.10	-1.97	0.86	0.733819
2165	2R_DroMel_CAF1	8,048,226 – 8,048,323	- - - - - - - - -	3577	8,048,226 – 8,048,323	+	4	110	77.38	-2.48	0.58	0.975861
2166	2R_DroMel_CAF1	8,049,835 – 8,049,926	- - - - - - - - -	3578	8,049,835 – 8,049,926	+	4	91	90.79	-2.06	0.76	0.778312
2167	2R_DroMel_CAF1	8,049,942 – 8,050,059	- - - - - - - - -	3579	8,049,942 – 8,050,059	-	4	119	87.01	-3.09	0.82	0.992440
2168	2R_DroMel_CAF1	8,051,654 – 8,051,771	- - - - - - - - -	3580	8,051,654 – 8,051,771	-	5	120	87.56	-2.70	0.69	0.895362
2169	2R_DroMel_CAF1	8,052,108 – 8,052,242	- - - - - - - - -	3581	8,052,108 – 8,052,202	+	5	94	95.53	-1.63	0.88	0.941488
				3582	8,052,108 – 8,052,202	-	5	94	95.53	-1.24	0.89	0.632018
				3583	8,052,137 – 8,052,242	-	6	120	85.69	-2.45	0.72	0.539030
2170	2R_DroMel_CAF1	8,052,489 – 8,052,632	- - - - - - - - -	3584	8,052,489 – 8,052,607	-	5	120	94.64	-1.78	0.93	0.994205
2170	2R_DroMel_CAF1	8,052,489 – 8,052,632	- - - - - - - - -	3585	8,052,529 – 8,052,632	-	5	105	95.79	-1.65	0.90	0.964876
2171	2R_DroMel_CAF1	8,052,885 – 8,052,985	- - - - - - - - -	3586	8,052,885 – 8,052,985	-	6	120	78.34	-2.06	0.62	0.917324
2172	2R_DroMel_CAF1	8,053,277 – 8,053,380	- - - - - - - - -	3587	8,053,277 – 8,053,380	-	5	120	85.64	-1.25	0.98	0.500000
2173	2R_DroMel_CAF1	8,054,840 – 8,054,931	- - - - - - - - -	3588	8,054,840 – 8,054,931	+	5	100	95.14	-1.63	1.00	0.995892
2174	2R_DroMel_CAF1	8,055,464 – 8,055,573	- - - - - - - - -	3589	8,055,464 – 8,055,573	-	3	120	75.07	-2.16	0.55	0.877253
2175	2R_DroMel_CAF1	8,055,925 – 8,056,056	- - - - - - - - -	3590	8,055,925 – 8,056,024	+	6	115	81.06	-1.83	0.59	0.569187
				3591	8,055,925 – 8,056,024	-	6	115	81.06	-1.86	0.58	0.557857
				3592	8,055,961 – 8,056,056	+	6	120	76.49	-2.99	0.48	0.992008
				3593	8,055,961 – 8,056,056	-	6	120	76.49	-1.93	0.51	0.755453
2176	2R_DroMel_CAF1	8,056,498 – 8,056,618	- - - - - - - - -	3594	8,056,498 – 8,056,600	+	5	106	94.50	-1.31	0.97	0.932663
2176	2R_DroMel_CAF1	8,056,498 – 8,056,618	- - - - - - - - -	3595	8,056,524 – 8,056,618	-	6	98	93.85	-1.86	0.94	0.996513
2177	2R_DroMel_CAF1	8,058,473 – 8,058,574	- - - - - - - - -	3596	8,058,473 – 8,058,574	+	5	104	91.31	-2.20	0.70	0.543767
2177	2R_DroMel_CAF1	8,058,473 – 8,058,574	- - - - - - - - -	3597	8,058,473 – 8,058,574	-	5	104	91.31	-2.87	0.85	0.999273
2178	2R_DroMel_CAF1	8,059,785 – 8,059,900	- - - - - - - - -	3598	8,059,785 – 8,059,900	+	5	115	93.30	-1.34	0.88	0.789742
2178	2R_DroMel_CAF1	8,059,785 – 8,059,900	- - - - - - - - -	3599	8,059,785 – 8,059,900	-	5	115	93.30	-1.54	0.83	0.809039
2179	2R_DroMel_CAF1	8,064,048 – 8,064,139	- - - - - - - - -	3600	8,064,048 – 8,064,139	+	6	91	91.06	-2.26	0.82	0.769975
2179	2R_DroMel_CAF1	8,064,048 – 8,064,139	- - - - - - - - -	3601	8,064,048 – 8,064,139	-	6	91	91.06	-1.70	0.86	0.732380
2180	2R_DroMel_CAF1	8,066,102 – 8,066,211	- - - - - - - - -	3602	8,066,102 – 8,066,199	+	6	116	77.29	-1.63	0.61	0.755446
2180	2R_DroMel_CAF1	8,066,102 – 8,066,211	- - - - - - - - -	3603	8,066,121 – 8,066,211	+	6	92	83.70	-2.88	0.74	0.849272
2181	2R_DroMel_CAF1	8,069,139 – 8,069,241	- - - - - - - - -	3604	8,069,139 – 8,069,241	+	4	106	83.82	-1.99	0.75	0.871316
2182	2R_DroMel_CAF1	8,071,710 – 8,071,829	- - - - - - - - -	3605	8,071,710 – 8,071,808	+	5	98	72.90	-1.78	0.33	0.687117
2182	2R_DroMel_CAF1	8,071,710 – 8,071,829	- - - - - - - - -	3606	8,071,737 – 8,071,829	-	5	92	77.90	-2.30	0.51	0.944507
2183	2R_DroMel_CAF1	8,072,050 – 8,072,143	- - - - - - - - -	3607	8,072,050 – 8,072,143	+	5	97	90.80	-1.36	0.80	0.518328
2184	2R_DroMel_CAF1	8,075,035 – 8,075,132	- - - - - - - - -	3608	8,075,035 – 8,075,132	-	6	119	82.36	-1.79	0.66	0.591011
2185	2R_DroMel_CAF1	8,078,333 – 8,078,475	- - "RNAmicro=f:8078373_t:8078474_strand:+_p:0.996321" "knownCDS=Parent=FBtr0087823;Name=CG30056-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30056-RA" - - - - -	3609	8,078,333 – 8,078,452	+	6	120	84.75	-2.53	0.73	0.692840
2185	2R_DroMel_CAF1	8,078,333 – 8,078,475		3610	8,078,373 – 8,078,475	+	6	102	89.54	-3.00	0.81	0.918263
2186	2R_DroMel_CAF1	8,079,334 – 8,079,448	- - - - - - - - -	3611	8,079,334 – 8,079,424	+	6	90	81.25	-1.59	0.68	0.658688
2186	2R_DroMel_CAF1	8,079,334 – 8,079,448	- - - - - - - - -	3612	8,079,347 – 8,079,448	+	5	101	93.73	-1.30	0.90	0.804496
2187	2R_DroMel_CAF1	8,082,447 – 8,082,566	- - - "knownCDS=Parent=FBtr0087824;Name=Cyp301a1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8587-RA" - - - - -	3613	8,082,447 – 8,082,566	+	6	119	76.34	-2.35	0.69	0.984877
2188	2R_DroMel_CAF1	8,084,255 – 8,084,361	- - - - - - - - -	3614	8,084,255 – 8,084,361	+	6	106	84.78	-1.64	0.80	0.549769
2189	2R_DroMel_CAF1	8,090,896 – 8,090,995	- - - - - - - - -	3615	8,090,896 – 8,090,995	-	6	106	78.18	-2.32	0.48	0.815888
2190	2R_DroMel_CAF1	8,091,479 – 8,091,569	- - - - - - - - -	3616	8,091,479 – 8,091,569	-	5	90	93.56	-1.40	0.89	0.874150
2191	2R_DroMel_CAF1	8,095,610 – 8,095,711	- - - "knownCDS=Parent=FBtr0087887;Name=Sin3A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8815-RC" - - - - -	3617	8,095,610 – 8,095,711	+	6	113	75.84	-2.07	0.54	0.916083
2191	2R_DroMel_CAF1	8,095,610 – 8,095,711		3618	8,095,610 – 8,095,711	-	6	113	75.84	-1.30	0.72	0.868692
2192	2R_DroMel_CAF1	8,101,392 – 8,101,500	- - - "knownCDS=Parent=FBtr0087889;Name=Sin3A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8815-RD" - - - - -	3619	8,101,392 – 8,101,500	-	6	111	79.08	-2.00	0.53	0.657286
2193	2R_DroMel_CAF1	8,102,815 – 8,102,918	- - - - - - - - -	3620	8,102,815 – 8,102,918	-	6	114	78.89	-2.44	0.53	0.902830
2194	2R_DroMel_CAF1	8,108,313 – 8,108,446	- - - - - - - - -	3621	8,108,313 – 8,108,425	-	6	120	72.47	-1.85	0.53	0.902446
2194	2R_DroMel_CAF1	8,108,313 – 8,108,446	- - - - - - - - -	3622	8,108,350 – 8,108,446	-	6	105	81.48	-2.10	0.76	0.869017
2195	2R_DroMel_CAF1	8,111,609 – 8,111,699	- - - - - - - - -	3623	8,111,609 – 8,111,699	-	6	114	78.30	-2.15	0.49	0.728078
2196	2R_DroMel_CAF1	8,112,466 – 8,112,564	- - - - - - - - -	3624	8,112,466 – 8,112,564	+	5	99	87.17	-1.59	0.73	0.537557
2197	2R_DroMel_CAF1	8,113,797 – 8,113,891	- - - - - - - - -	3625	8,113,797 – 8,113,891	-	3	101	76.61	-1.31	0.88	0.959855
2198	2R_DroMel_CAF1	8,119,737 – 8,119,835	- - - - - - - - -	3626	8,119,737 – 8,119,835	-	3	98	97.28	-1.55	0.94	0.527007
2199	2R_DroMel_CAF1	8,120,327 – 8,120,431	- - - - - - - - -	3627	8,120,327 – 8,120,431	-	3	104	86.89	-1.14	0.94	0.637204
2200	2R_DroMel_CAF1	8,125,426 – 8,125,553	- - - "knownCDS=Parent=FBtr0087828;Name=Amph-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8604-RA" - - - - -	3628	8,125,426 – 8,125,528	+	4	102	98.53	-2.16	0.94	0.815355
				3629	8,125,426 – 8,125,528	-	4	102	98.53	-1.94	0.96	0.753221
				3630	8,125,460 – 8,125,553	+	5	93	98.49	-1.60	0.98	0.966621
2201	2R_DroMel_CAF1	8,125,639 – 8,125,733	- - - "knownCDS=Parent=FBtr0087828;Name=Amph-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8604-RA" - - - - -	3631	8,125,639 – 8,125,733	-	6	97	82.18	-1.86	0.71	0.725915
2202	2R_DroMel_CAF1	8,128,234 – 8,128,392	- - - - - - - - -	3632	8,128,234 – 8,128,352	-	5	120	65.77	-1.81	0.51	0.891815
2202	2R_DroMel_CAF1	8,128,234 – 8,128,392	- - - - - - - - -	3633	8,128,273 – 8,128,392	-	4	120	78.61	-2.67	0.79	0.998048
2203	2R_DroMel_CAF1	8,128,794 – 8,128,907	- - - - - - - - -	3634	8,128,794 – 8,128,907	+	6	114	79.75	-1.38	0.64	0.542453
2204	2R_DroMel_CAF1	8,129,454 – 8,129,572	- - - - - - - - -	3635	8,129,454 – 8,129,552	+	6	120	78.92	-1.85	0.59	0.758602
2204	2R_DroMel_CAF1	8,129,454 – 8,129,572	- - - - - - - - -	3636	8,129,472 – 8,129,572	+	6	119	85.64	-1.71	0.84	0.642480
2205	2R_DroMel_CAF1	8,132,534 – 8,132,647	- - - "knownCDS=Parent=FBtr0087829, FBtr0087830, FBtr0087831, FBtr0087832, FBtr0087833, FBtr0087834, FBtr0087835, FBtr0087836;Name=Galpha49B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17759-RA, FlyBase+Annotation+IDs:CG17759-RG, FlyBase+Annotation+IDs:CG17759-RC, FlyBase+Annotation+IDs:CG17759-RD, FlyBase+Annotation+IDs:CG17759-RE, FlyBase+Annotation+IDs:CG17759-RH, FlyBase+Annotation+IDs:CG17759-RB, FlyBase+Annotation+IDs:CG17759-RF" - - - - -	3637	8,132,534 – 8,132,647	+	6	115	80.46	-1.97	0.54	0.521408
2206	2R_DroMel_CAF1	8,133,347 – 8,133,465	- - - "knownCDS=Parent=FBtr0087832, FBtr0087836;Name=Galpha49B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17759-RD, FlyBase+Annotation+IDs:CG17759-RF" - - - - -	3638	8,133,347 – 8,133,465	+	6	120	80.38	-1.62	0.70	0.768287
2207	2R_DroMel_CAF1	8,134,964 – 8,135,084	- - - "knownCDS=Parent=FBtr0087829, FBtr0087830, FBtr0087831, FBtr0087833, FBtr0087834, FBtr0087835;Name=Galpha49B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17759-RA, FlyBase+Annotation+IDs:CG17759-RG, FlyBase+Annotation+IDs:CG17759-RC, FlyBase+Annotation+IDs:CG17759-RE, FlyBase+Annotation+IDs:CG17759-RH, FlyBase+Annotation+IDs:CG17759-RB" - - - - -	3639	8,134,964 – 8,135,084	+	6	120	92.28	-1.12	0.93	0.731573
2208	2R_DroMel_CAF1	8,135,482 – 8,135,580	- - - - - - - - -	3640	8,135,482 – 8,135,580	-	5	120	80.64	-1.57	0.76	0.670751
2209	2R_DroMel_CAF1	8,136,560 – 8,136,670	- - - - - - - - -	3641	8,136,560 – 8,136,670	+	6	118	78.71	-1.82	0.62	0.819149
2210	2R_DroMel_CAF1	8,139,904 – 8,140,015	- - - "knownCDS=Parent=FBtr0087837, FBtr0087838;Name=CG30054-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30054-RB, FlyBase+Annotation+IDs:CG30054-RA" - - - - -	3642	8,139,904 – 8,140,015	+	6	111	81.56	-2.86	0.68	0.914976
2210	2R_DroMel_CAF1	8,139,904 – 8,140,015		3643	8,139,904 – 8,140,015	-	6	111	81.56	-2.66	0.66	0.885780
2211	2R_DroMel_CAF1	8,141,089 – 8,141,188	- - - - - - - - -	3644	8,141,089 – 8,141,188	-	3	120	60.60	-1.33	0.50	0.510098
2212	2R_DroMel_CAF1	8,141,556 – 8,141,657	- - - - - - - - -	3645	8,141,556 – 8,141,657	+	4	120	78.48	-2.29	0.66	0.975113
2213	2R_DroMel_CAF1	8,147,125 – 8,147,239	- - - - - - - - -	3646	8,147,125 – 8,147,239	+	6	117	79.54	-2.36	0.72	0.948122
2213	2R_DroMel_CAF1	8,147,125 – 8,147,239	- - - - - - - - -	3647	8,147,125 – 8,147,239	-	6	117	79.54	-1.85	0.77	0.908676
2214	2R_DroMel_CAF1	8,152,507 – 8,152,614	- - - - - - - - -	3648	8,152,507 – 8,152,614	-	6	119	77.54	-1.77	0.62	0.855724
2215	2R_DroMel_CAF1	8,153,437 – 8,153,539	- - - - - - - - -	3649	8,153,437 – 8,153,539	+	6	102	83.51	-1.68	0.71	0.530949
2216	2R_DroMel_CAF1	8,157,005 – 8,157,165	- - - "knownCDS=Parent=FBtr0087881, FBtr0087882;Name=CG8785-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8785-RA, FlyBase+Annotation+IDs:CG8785-RB" - - - - -	3650	8,157,005 – 8,157,125	+	6	120	80.28	-1.78	0.59	0.628064
				3651	8,157,005 – 8,157,125	-	6	120	80.28	-1.66	0.68	0.762130
				3652	8,157,045 – 8,157,165	-	6	120	82.94	-1.80	0.67	0.558534
2217	2R_DroMel_CAF1	8,165,113 – 8,165,213	- - - - - - - - -	3653	8,165,113 – 8,165,213	+	6	110	77.73	-2.20	0.42	0.592128
2218	2R_DroMel_CAF1	8,168,776 – 8,168,878	- - - - - - - - -	3654	8,168,776 – 8,168,878	-	5	103	91.64	-1.70	0.77	0.700340
2219	2R_DroMel_CAF1	8,172,219 – 8,172,370	- - - - - - - - -	3655	8,172,219 – 8,172,330	+	5	111	94.77	-1.80	0.85	0.954042
				3656	8,172,219 – 8,172,330	-	5	111	94.77	-1.49	0.87	0.866130
				3657	8,172,259 – 8,172,370	+	5	111	92.16	-1.85	0.80	0.877227
				3658	8,172,259 – 8,172,370	-	5	111	92.16	-1.97	0.74	0.672497
2220	2R_DroMel_CAF1	8,179,419 – 8,179,511	- - - - - - - - -	3659	8,179,419 – 8,179,511	+	6	98	84.04	-1.82	0.71	0.508083
2221	2R_DroMel_CAF1	8,195,637 – 8,195,734	- - - - - - - - -	3660	8,195,637 – 8,195,734	+	4	98	83.76	-2.35	0.66	0.911687
2222	2R_DroMel_CAF1	8,203,985 – 8,204,093	- - - "knownCDS=Parent=FBtr0087847, FBtr0087848;Name=CG13148-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13148-RB, FlyBase+Annotation+IDs:CG13148-RA" - - - - -	3661	8,203,985 – 8,204,093	+	5	108	91.67	-2.35	0.78	0.960874
2223	2R_DroMel_CAF1	8,205,118 – 8,205,237	- - - "knownCDS=Parent=FBtr0087873;Name=CG30053-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30053-RA" - - - - -	3662	8,205,118 – 8,205,237	+	6	119	76.30	-2.24	0.41	0.735698
2224	2R_DroMel_CAF1	8,205,559 – 8,205,673	- - "RNAmicro=f:8205559_t:8205672_strand:+_p:0.970715" "knownCDS=Parent=FBtr0087873;Name=CG30053-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30053-RA" - - - - -	3663	8,205,559 – 8,205,673	-	6	114	75.73	-1.56	0.69	0.922237
2225	2R_DroMel_CAF1	8,209,388 – 8,209,488	- - - - - - - - -	3664	8,209,388 – 8,209,488	-	4	104	78.56	-1.87	0.57	0.549538
2226	2R_DroMel_CAF1	8,211,077 – 8,211,215	- - - - - - - - -	3665	8,211,077 – 8,211,181	-	6	116	85.13	-1.55	0.81	0.500000
				3666	8,211,117 – 8,211,215	+	6	113	79.00	-1.91	0.59	0.795408
				3667	8,211,117 – 8,211,215	-	6	113	79.00	-1.44	0.61	0.514566
2227	2R_DroMel_CAF1	8,213,365 – 8,213,463	- - - - - - - - -	3668	8,213,365 – 8,213,463	+	5	112	81.90	-1.97	0.62	0.716590
2228	2R_DroMel_CAF1	8,216,771 – 8,216,876	- - - - - - - - -	3669	8,216,771 – 8,216,876	+	6	120	80.72	-1.39	0.75	0.693170
2229	2R_DroMel_CAF1	8,219,890 – 8,219,983	- - - - - - - - -	3670	8,219,890 – 8,219,983	-	4	93	83.03	-1.69	0.75	0.703231
2230	2R_DroMel_CAF1	8,234,078 – 8,234,216	- - - - - - - - -	3671	8,234,078 – 8,234,191	+	5	120	90.53	-1.41	0.91	0.859567
2230	2R_DroMel_CAF1	8,234,078 – 8,234,216	- - - - - - - - -	3672	8,234,118 – 8,234,216	+	5	116	89.95	-2.52	0.88	0.999161
2231	2R_DroMel_CAF1	8,235,395 – 8,235,492	- - - - - - - - -	3673	8,235,395 – 8,235,492	+	6	119	79.87	-2.09	0.50	0.525513
2231	2R_DroMel_CAF1	8,235,395 – 8,235,492	- - - - - - - - -	3674	8,235,395 – 8,235,492	-	6	119	79.87	-2.42	0.62	0.921367
2232	2R_DroMel_CAF1	8,249,993 – 8,250,125	- - - - - - - - -	3675	8,249,993 – 8,250,097	+	6	108	77.03	-1.51	0.66	0.821962
				3676	8,249,993 – 8,250,097	-	6	108	77.03	-2.78	0.86	0.978459
				3677	8,250,024 – 8,250,125	-	6	118	78.03	-2.29	0.58	0.941691
2233	2R_DroMel_CAF1	8,253,003 – 8,253,103	- - - - - - - - -	3678	8,253,003 – 8,253,103	-	4	101	91.04	-1.78	0.80	0.746123
2234	2R_DroMel_CAF1	8,255,396 – 8,255,498	- - - - - - - - -	3679	8,255,396 – 8,255,498	+	6	112	85.13	-1.81	0.87	0.810483
2235	2R_DroMel_CAF1	8,260,626 – 8,260,763	- - - - - - - - -	3680	8,260,626 – 8,260,723	+	6	104	75.91	-1.90	0.46	0.557500
				3681	8,260,626 – 8,260,723	-	6	104	75.91	-1.86	0.81	0.974458
				3682	8,260,645 – 8,260,763	+	6	118	81.10	-2.78	0.69	0.931208
2236	2R_DroMel_CAF1	8,264,627 – 8,264,728	- - - - - - - - -	3683	8,264,627 – 8,264,728	+	5	120	74.03	-1.48	0.06	0.707494
2237	2R_DroMel_CAF1	8,271,662 – 8,271,761	- - - - - - - - -	3684	8,271,662 – 8,271,761	+	5	114	81.17	-1.94	0.57	0.618341
2238	2R_DroMel_CAF1	8,274,466 – 8,274,586	- - - "knownCDS=Parent=FBtr0087853;Name=Dgkepsilon-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8657-RA" - - - - -	3685	8,274,466 – 8,274,586	+	6	120	80.56	-1.53	0.63	0.564748
2239	2R_DroMel_CAF1	8,275,177 – 8,275,270	- - - "knownCDS=Parent=FBtr0087853;Name=Dgkepsilon-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8657-RA" - - - - -	3686	8,275,177 – 8,275,270	+	6	97	81.27	-1.47	0.67	0.582991
2240	2R_DroMel_CAF1	8,275,727 – 8,275,837	- - - - - - - - -	3687	8,275,727 – 8,275,837	+	6	111	75.67	-1.93	0.46	0.633358
2240	2R_DroMel_CAF1	8,275,727 – 8,275,837	- - - - - - - - -	3688	8,275,727 – 8,275,837	-	6	111	75.67	-1.67	0.52	0.555564
2241	2R_DroMel_CAF1	8,277,386 – 8,277,543	- - - - - - - - -	3689	8,277,386 – 8,277,503	+	4	117	92.45	-2.85	0.84	0.974243
2241	2R_DroMel_CAF1	8,277,386 – 8,277,543	- - - - - - - - -	3690	8,277,426 – 8,277,543	+	4	117	93.30	-2.33	0.90	0.974973
2242	2R_DroMel_CAF1	8,281,126 – 8,281,234	- - - - - - - - -	3691	8,281,126 – 8,281,234	-	6	117	75.46	-2.08	0.39	0.594705
2243	2R_DroMel_CAF1	8,283,403 – 8,283,507	- - - - - - - - -	3692	8,283,403 – 8,283,507	-	6	119	77.00	-1.89	0.66	0.940194
2244	2R_DroMel_CAF1	8,284,663 – 8,284,766	- - - - - - - - -	3693	8,284,663 – 8,284,766	-	5	120	82.06	-1.93	0.64	0.725943
2245	2R_DroMel_CAF1	8,284,857 – 8,284,970	- - - - - - - - -	3694	8,284,857 – 8,284,970	-	6	120	78.80	-1.64	0.59	0.609130
2246	2R_DroMel_CAF1	8,286,457 – 8,286,566	- - - - - - - - -	3695	8,286,457 – 8,286,566	+	6	120	79.11	-1.82	0.59	0.740602
2247	2R_DroMel_CAF1	8,286,702 – 8,286,876	- - - - - - - - -	3696	8,286,702 – 8,286,822	+	5	120	79.17	-1.42	0.79	0.690038
				3697	8,286,742 – 8,286,851	+	3	109	79.28	0.04	0.92	0.537411
				3698	8,286,782 – 8,286,876	+	3	94	78.16	-1.55	0.66	0.589174
2248	2R_DroMel_CAF1	8,287,426 – 8,287,523	- - - - - - - - -	3699	8,287,426 – 8,287,523	+	6	120	78.90	-1.57	0.73	0.857951
2249	2R_DroMel_CAF1	8,287,988 – 8,288,086	- - - - - - - - -	3700	8,287,988 – 8,288,086	+	5	102	91.24	-2.04	0.78	0.914389
2249	2R_DroMel_CAF1	8,287,988 – 8,288,086	- - - - - - - - -	3701	8,287,988 – 8,288,086	-	5	102	91.24	-1.59	0.87	0.913416
2250	2R_DroMel_CAF1	8,289,570 – 8,289,664	- - - - - - - - -	3702	8,289,570 – 8,289,664	-	6	120	74.33	-2.62	0.39	0.971879
2251	2R_DroMel_CAF1	8,290,278 – 8,290,394	- - - - - - - - -	3703	8,290,278 – 8,290,394	-	4	119	68.11	-2.18	0.55	0.993122
2252	2R_DroMel_CAF1	8,292,201 – 8,292,302	- - - - - - - - -	3704	8,292,201 – 8,292,302	-	5	113	90.93	-1.38	0.80	0.551105
2253	2R_DroMel_CAF1	8,292,997 – 8,293,088	- - - - - - - - -	3705	8,292,997 – 8,293,088	-	5	100	81.61	-2.00	0.69	0.843071
2254	2R_DroMel_CAF1	8,293,498 – 8,293,594	- - - - - - - - -	3706	8,293,498 – 8,293,594	+	5	96	95.62	-2.56	0.90	0.999537
2254	2R_DroMel_CAF1	8,293,498 – 8,293,594	- - - - - - - - -	3707	8,293,498 – 8,293,594	-	5	96	95.62	-1.69	0.90	0.975686
2255	2R_DroMel_CAF1	8,298,364 – 8,298,454	- - - - - - - - -	3708	8,298,364 – 8,298,454	+	5	90	86.78	-1.76	0.76	0.729465
2256	2R_DroMel_CAF1	8,298,581 – 8,298,677	- - - - - - - - -	3709	8,298,581 – 8,298,677	+	5	100	85.57	-1.58	0.95	0.835571
2257	2R_DroMel_CAF1	8,301,886 – 8,301,991	- - - - - - - - -	3710	8,301,886 – 8,301,991	-	6	108	80.56	-1.57	0.66	0.668879
2258	2R_DroMel_CAF1	8,304,981 – 8,305,074	- - - - - - - - -	3711	8,304,981 – 8,305,074	+	6	93	80.70	-1.65	0.60	0.523685
2259	2R_DroMel_CAF1	8,313,979 – 8,314,071	- - - - - - - - -	3712	8,313,979 – 8,314,071	+	5	92	90.54	-2.03	0.86	0.985758
2259	2R_DroMel_CAF1	8,313,979 – 8,314,071	- - - - - - - - -	3713	8,313,979 – 8,314,071	-	5	92	90.54	-1.27	0.85	0.548993
2260	2R_DroMel_CAF1	8,318,505 – 8,318,606	- - - - - - - - -	3714	8,318,505 – 8,318,606	+	5	103	79.70	-2.24	0.61	0.928125
2261	2R_DroMel_CAF1	8,329,221 – 8,329,324	- - - - - - - - -	3715	8,329,221 – 8,329,324	+	6	116	74.56	-2.38	0.39	0.909154
2262	2R_DroMel_CAF1	8,342,805 – 8,342,898	- - - - - - - - -	3716	8,342,805 – 8,342,898	+	5	102	88.79	-1.77	0.74	0.655151
2263	2R_DroMel_CAF1	8,344,793 – 8,344,884	- - - - - - - - -	3717	8,344,793 – 8,344,884	+	6	91	80.04	-2.07	0.62	0.841015
2264	2R_DroMel_CAF1	8,350,223 – 8,350,316	- - - - - - - - -	3718	8,350,223 – 8,350,316	+	5	93	73.66	-1.87	0.36	0.776234
2265	2R_DroMel_CAF1	8,351,782 – 8,351,877	- - - - - - - - -	3719	8,351,782 – 8,351,877	-	5	98	90.32	-1.69	0.83	0.888359
2266	2R_DroMel_CAF1	8,357,013 – 8,357,133	- - - "knownCDS=Parent=FBtr0087820;Name=Cyp9h1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17577-RA" - - - - -	3720	8,357,013 – 8,357,133	-	6	120	80.67	-1.85	0.59	0.607649
2267	2R_DroMel_CAF1	8,359,564 – 8,359,676	- - - "knownCDS=Parent=FBtr0087781;Name=Or49b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17584-RA" - - - - -	3721	8,359,564 – 8,359,676	+	6	113	75.22	-2.05	0.44	0.761858
2268	2R_DroMel_CAF1	8,360,331 – 8,360,427	- - - - - - - - -	3722	8,360,331 – 8,360,427	+	6	113	65.21	-0.94	0.64	0.516749
2269	2R_DroMel_CAF1	8,361,954 – 8,362,062	- - - "knownCDS=Parent=FBtr0087819;Name=CG17575-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17575-RA" - - - - -	3723	8,361,954 – 8,362,062	-	6	111	79.76	-1.84	0.56	0.609699
2270	2R_DroMel_CAF1	8,366,026 – 8,366,159	- - - "knownCDS=Parent=FBtr0087816;Name=CG17574-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17574-RA" - - - - -	3724	8,366,026 – 8,366,140	-	6	114	80.75	-1.39	0.75	0.685988
				3725	8,366,060 – 8,366,159	+	6	99	80.41	-1.82	0.61	0.694550
				3726	8,366,060 – 8,366,159	-	6	99	80.41	-1.80	0.73	0.844171
2271	2R_DroMel_CAF1	8,385,548 – 8,385,693	- - - - - - - - -	3727	8,385,548 – 8,385,653	+	3	119	80.39	-2.02	0.60	0.647595
				3728	8,385,548 – 8,385,653	-	3	119	80.39	-2.00	0.59	0.547811
				3729	8,385,580 – 8,385,693	+	3	119	87.11	-2.49	0.74	0.786744
2272	2R_DroMel_CAF1	8,386,064 – 8,386,171	- - - - - - - - -	3730	8,386,064 – 8,386,171	+	6	117	77.46	-1.78	0.52	0.549799
2272	2R_DroMel_CAF1	8,386,064 – 8,386,171	- - - - - - - - -	3731	8,386,064 – 8,386,171	-	6	117	77.46	-2.50	0.43	0.870218
2273	2R_DroMel_CAF1	8,387,294 – 8,387,388	- - - - - - - - -	3732	8,387,294 – 8,387,388	-	4	98	93.28	-1.49	0.96	0.768960
2274	2R_DroMel_CAF1	8,388,977 – 8,389,089	- - - "knownCDS=Parent=FBtr0087815;Name=CG3790-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3790-RA" - - - - -	3733	8,388,977 – 8,389,089	-	6	113	74.43	-1.62	0.55	0.697676
2275	2R_DroMel_CAF1	8,391,616 – 8,391,723	- - - - - - - - -	3734	8,391,616 – 8,391,723	+	6	110	80.33	-1.91	0.64	0.789147
2275	2R_DroMel_CAF1	8,391,616 – 8,391,723	- - - - - - - - -	3735	8,391,616 – 8,391,723	-	6	110	80.33	-1.52	0.68	0.691346
2276	2R_DroMel_CAF1	8,393,770 – 8,393,890	- - - "knownCDS=Parent=FBtr0089873, FBtr0089874, FBtr0089875, FBtr0089876, FBtr0089877, FBtr0089878;Name=Nmda1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3798-RE, FlyBase+Annotation+IDs:CG3798-RB, FlyBase+Annotation+IDs:CG3798-RD, FlyBase+Annotation+IDs:CG3798-RA, FlyBase+Annotation+IDs:CG3798-RC, FlyBase+Annotation+IDs:CG3798-RF" - - - - -	3736	8,393,770 – 8,393,890	-	6	120	78.00	-1.48	0.60	0.587272
2277	2R_DroMel_CAF1	8,394,381 – 8,394,517	- - - "knownCDS=Parent=FBtr0089878;Name=Nmda1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3798-RF" - - - - -	3737	8,394,381 – 8,394,483	+	6	120	76.62	-2.77	0.59	0.991053
				3738	8,394,381 – 8,394,483	-	6	120	76.62	-1.97	0.46	0.600297
				3739	8,394,421 – 8,394,517	+	6	117	76.34	-2.22	0.54	0.948131
2278	2R_DroMel_CAF1	8,397,611 – 8,397,731	- - - "knownCDS=Parent=FBtr0087784;Name=Aats-asp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3821-RA" - - - - -	3740	8,397,611 – 8,397,731	-	6	120	80.22	-1.82	0.60	0.676558
2279	2R_DroMel_CAF1	8,400,378 – 8,400,474	- - - - - - - - -	3741	8,400,378 – 8,400,474	+	6	102	81.43	-1.51	0.64	0.505541
2280	2R_DroMel_CAF1	8,401,662 – 8,401,754	- - - - - - - - -	3742	8,401,662 – 8,401,754	+	5	101	75.50	-2.27	0.58	0.982297
2280	2R_DroMel_CAF1	8,401,662 – 8,401,754	- - - - - - - - -	3743	8,401,662 – 8,401,754	-	5	101	75.50	-3.68	0.65	0.999862
2281	2R_DroMel_CAF1	8,406,018 – 8,406,111	- - - - - - - - -	3744	8,406,018 – 8,406,111	+	5	97	92.16	-1.52	0.84	0.826895
2281	2R_DroMel_CAF1	8,406,018 – 8,406,111	- - - - - - - - -	3745	8,406,018 – 8,406,111	-	5	97	92.16	-1.75	0.85	0.952426
2282	2R_DroMel_CAF1	8,407,433 – 8,407,567	- - "RNAmicro=f:8407473_t:8407579_strand:+_p:0.777213" "knownCDS=Parent=FBtr0087785;Name=vg-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3830-RA" - - - - -	3746	8,407,433 – 8,407,547	+	5	117	80.12	-2.35	0.78	0.981811
				3747	8,407,433 – 8,407,547	-	5	117	80.12	-1.69	0.62	0.548203
				3748	8,407,473 – 8,407,567	+	5	107	75.17	-3.96	0.66	0.999875
				3749	8,407,473 – 8,407,567	-	5	107	75.17	-1.96	0.52	0.866308
2283	2R_DroMel_CAF1	8,408,015 – 8,408,190	- - - - - - - - -	3750	8,408,015 – 8,408,120	-	5	118	74.50	-2.25	0.35	0.974917
2283	2R_DroMel_CAF1	8,408,015 – 8,408,190	- - - - - - - - -	3751	8,408,080 – 8,408,190	-	5	114	79.64	-2.24	0.38	0.761476
2284	2R_DroMel_CAF1	8,408,226 – 8,408,318	- - - - - - - - -	3752	8,408,226 – 8,408,318	+	5	96	77.06	-1.77	0.55	0.601322
2284	2R_DroMel_CAF1	8,408,226 – 8,408,318	- - - - - - - - -	3753	8,408,226 – 8,408,318	-	5	96	77.06	-2.39	0.43	0.968478
2285	2R_DroMel_CAF1	8,409,932 – 8,410,076	- - - - - - - - -	3754	8,409,932 – 8,410,046	-	6	120	95.17	-2.04	0.96	0.999450
2285	2R_DroMel_CAF1	8,409,932 – 8,410,076	- - - - - - - - -	3755	8,409,972 – 8,410,076	-	6	120	77.21	-0.90	0.72	0.511774
2286	2R_DroMel_CAF1	8,410,989 – 8,411,080	- - - - - - - - -	3756	8,410,989 – 8,411,080	+	6	99	76.63	-2.35	0.55	0.966563
2286	2R_DroMel_CAF1	8,410,989 – 8,411,080	- - - - - - - - -	3757	8,410,989 – 8,411,080	-	6	99	76.63	-1.59	0.69	0.906561
2287	2R_DroMel_CAF1	8,411,736 – 8,411,849	- - - - - - - - -	3758	8,411,736 – 8,411,830	-	6	98	88.95	-2.78	0.86	0.980330
2287	2R_DroMel_CAF1	8,411,736 – 8,411,849	- - - - - - - - -	3759	8,411,757 – 8,411,849	-	6	97	79.21	-1.97	0.54	0.652606
2288	2R_DroMel_CAF1	8,424,198 – 8,424,292	- - - - - - - - -	3760	8,424,198 – 8,424,292	-	6	120	70.98	-1.75	0.61	0.951427
2289	2R_DroMel_CAF1	8,426,563 – 8,426,682	- - - - - - - - -	3761	8,426,563 – 8,426,657	+	5	94	96.17	-1.60	0.90	0.948857
2289	2R_DroMel_CAF1	8,426,563 – 8,426,682	- - - - - - - - -	3762	8,426,578 – 8,426,682	+	5	104	91.34	-1.92	0.92	0.996385
2290	2R_DroMel_CAF1	8,434,910 – 8,435,064	- - - "knownCDS=Parent=FBtr0100672;Name=l(2)01424-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3845-RC" - - - - -	3763	8,434,910 – 8,435,030	+	5	120	94.17	-2.75	0.94	0.999953
2290	2R_DroMel_CAF1	8,434,910 – 8,435,064		3764	8,434,950 – 8,435,064	+	5	120	87.21	-3.06	0.78	0.994353
2291	2R_DroMel_CAF1	8,437,130 – 8,437,317	- - "RNAmicro=f:8437130_t:8437249_strand:-_p:0.513836" "knownCDS=Parent=FBtr0087787;Name=l(2)01424-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3845-RB" - - - - -	3765	8,437,130 – 8,437,247	+	6	120	82.41	-1.99	0.65	0.635991
				3766	8,437,130 – 8,437,247	-	6	120	82.41	-1.99	0.70	0.720347
				3767	8,437,207 – 8,437,317	-	6	113	79.52	-1.25	0.67	0.545185
2292	2R_DroMel_CAF1	8,437,904 – 8,438,064	- - - "knownCDS=Parent=FBtr0087787;Name=l(2)01424-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3845-RB" - - - - -	3768	8,437,904 – 8,438,024	+	6	120	82.89	-2.15	0.70	0.721214
				3769	8,437,904 – 8,438,024	-	6	120	82.89	-1.74	0.68	0.560933
				3770	8,437,944 – 8,438,064	+	6	120	82.28	-1.64	0.70	0.618432
				3771	8,437,944 – 8,438,064	-	6	120	82.28	-2.10	0.63	0.655768
2293	2R_DroMel_CAF1	8,446,285 – 8,446,378	- - - "knownCDS=Parent=FBtr0087789;Name=sug-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3850-RA" - - - - -	3772	8,446,285 – 8,446,378	-	6	93	77.28	-1.78	0.52	0.592673
2294	2R_DroMel_CAF1	8,457,702 – 8,457,808	- - - - - - - - -	3773	8,457,702 – 8,457,808	+	6	116	72.87	-1.84	0.70	0.981930
2294	2R_DroMel_CAF1	8,457,702 – 8,457,808	- - - - - - - - -	3774	8,457,702 – 8,457,808	-	6	116	72.87	-0.77	0.81	0.837264
2295	2R_DroMel_CAF1	8,465,179 – 8,465,275	- - - "knownCDS=Parent=FBtr0087800;Name=CG3884-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3884-RA" - - - - -	3775	8,465,179 – 8,465,275	-	5	102	87.49	-1.37	0.83	0.505730
2296	2R_DroMel_CAF1	8,465,378 – 8,465,585	- - - "knownCDS=Parent=FBtr0087800;Name=CG3884-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3884-RA" - - - - -	3776	8,465,378 – 8,465,477	+	6	105	76.74	-2.63	0.63	0.988384
				3777	8,465,378 – 8,465,477	-	6	105	76.74	-1.96	0.47	0.628568
				3778	8,465,412 – 8,465,511	+	6	105	77.62	-1.50	0.65	0.775320
				3779	8,465,443 – 8,465,548	+	6	108	77.80	-2.03	0.60	0.913603
				3780	8,465,477 – 8,465,585	+	6	108	82.01	-1.50	0.65	0.500000
2297	2R_DroMel_CAF1	8,467,780 – 8,467,879	- - - - - - - - -	3781	8,467,780 – 8,467,879	+	5	99	92.20	-1.32	0.90	0.809446
2298	2R_DroMel_CAF1	8,481,677 – 8,481,775	- - - - - - - - -	3782	8,481,677 – 8,481,775	+	5	105	91.10	-1.49	0.91	0.920132
2299	2R_DroMel_CAF1	8,482,167 – 8,482,326	- - - - - - - - -	3783	8,482,167 – 8,482,286	+	4	120	80.51	-1.57	0.71	0.571752
				3784	8,482,167 – 8,482,286	-	4	120	80.51	-3.22	0.76	0.999201
				3785	8,482,206 – 8,482,326	+	5	120	90.83	-1.12	0.96	0.587202
				3786	8,482,206 – 8,482,326	-	5	120	90.83	-2.53	0.89	0.999465
2300	2R_DroMel_CAF1	8,482,785 – 8,482,979	- - - "knownCDS=Parent=FBtr0087798;Name=Psc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3886-RA" - - - - -	3787	8,482,785 – 8,482,899	-	6	117	83.68	-2.84	0.67	0.749599
2300	2R_DroMel_CAF1	8,482,785 – 8,482,979		3788	8,482,865 – 8,482,979	-	6	117	82.46	-2.21	0.69	0.760262
2301	2R_DroMel_CAF1	8,483,368 – 8,483,492	- - - "knownCDS=Parent=FBtr0087798;Name=Psc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3886-RA" - - - - -	3789	8,483,368 – 8,483,464	+	5	96	92.60	-1.91	0.73	0.562392
2301	2R_DroMel_CAF1	8,483,368 – 8,483,492		3790	8,483,384 – 8,483,492	+	3	108	66.36	-1.76	0.62	0.997135
2302	2R_DroMel_CAF1	8,483,642 – 8,483,754	- - - "knownCDS=Parent=FBtr0087798;Name=Psc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3886-RA" - - - - -	3791	8,483,642 – 8,483,754	+	5	112	93.66	-1.39	0.95	0.947209
2303	2R_DroMel_CAF1	8,484,265 – 8,484,385	- - - "knownCDS=Parent=FBtr0087798;Name=Psc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3886-RA" - - - - -	3792	8,484,265 – 8,484,385	-	5	120	92.73	-1.81	0.88	0.984762
2304	2R_DroMel_CAF1	8,485,583 – 8,485,683	- - - "knownCDS=Parent=FBtr0087798;Name=Psc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3886-RA" - - - - -	3793	8,485,583 – 8,485,683	+	5	100	84.50	-1.56	0.84	0.629138
2305	2R_DroMel_CAF1	8,489,090 – 8,489,209	- - - - - - - - -	3794	8,489,090 – 8,489,209	+	4	120	81.57	-2.62	0.66	0.980243
2306	2R_DroMel_CAF1	8,490,116 – 8,490,235	- - - - - - - - -	3795	8,490,116 – 8,490,235	+	4	120	85.12	-1.43	0.74	0.523872
2306	2R_DroMel_CAF1	8,490,116 – 8,490,235	- - - - - - - - -	3796	8,490,116 – 8,490,235	-	4	120	85.12	-1.72	0.70	0.682995
2307	2R_DroMel_CAF1	8,490,275 – 8,490,377	- - - - - - - - -	3797	8,490,275 – 8,490,377	+	5	120	81.15	-3.13	0.64	0.994927
2307	2R_DroMel_CAF1	8,490,275 – 8,490,377	- - - - - - - - -	3798	8,490,275 – 8,490,377	-	5	120	81.15	-4.18	0.63	0.999095
2308	2R_DroMel_CAF1	8,494,200 – 8,494,435	- - "RNAmicro=f:8494239_t:8494358_strand:+_p:0.986509" - - - - - -	3799	8,494,200 – 8,494,315	-	5	120	87.96	-2.43	0.70	0.849423
				3800	8,494,239 – 8,494,355	-	5	120	89.69	-2.83	0.78	0.991310
				3801	8,494,315 – 8,494,435	-	5	120	96.16	-1.74	0.90	0.977400
2309	2R_DroMel_CAF1	8,496,163 – 8,496,272	- - - - - - - - -	3802	8,496,163 – 8,496,272	-	5	112	91.25	-2.00	0.73	0.677548
2310	2R_DroMel_CAF1	8,496,424 – 8,496,523	- - - - - - - - -	3803	8,496,424 – 8,496,523	+	5	99	95.15	-1.89	0.98	0.998968
2311	2R_DroMel_CAF1	8,497,401 – 8,497,547	- - - - - - - - -	3804	8,497,401 – 8,497,507	-	6	120	81.07	-2.07	0.53	0.500000
				3805	8,497,434 – 8,497,547	+	5	113	92.21	-3.05	0.86	0.999659
				3806	8,497,434 – 8,497,547	-	5	113	92.21	-2.51	0.84	0.996884
2312	2R_DroMel_CAF1	8,500,294 – 8,500,446	- - - - - - - - -	3807	8,500,294 – 8,500,414	+	4	120	90.97	-1.81	0.80	0.749491
				3808	8,500,294 – 8,500,414	-	4	120	90.97	-2.04	0.78	0.806356
				3809	8,500,334 – 8,500,446	+	6	120	78.55	-1.98	0.56	0.800416
2313	2R_DroMel_CAF1	8,509,238 – 8,509,328	- - - - - - - - -	3810	8,509,238 – 8,509,328	+	5	119	74.91	-2.02	0.44	0.875880
2314	2R_DroMel_CAF1	8,518,378 – 8,518,470	- - - "knownCDS=Parent=FBtr0087793;Name=Su(z)2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3905-RA" - - - - -	3811	8,518,378 – 8,518,470	+	3	120	68.67	-1.61	0.58	0.913277
2315	2R_DroMel_CAF1	8,521,844 – 8,521,952	- - - - - - - - -	3812	8,521,844 – 8,521,952	+	3	115	91.72	-2.61	0.94	0.972936
2316	2R_DroMel_CAF1	8,522,574 – 8,522,713	- - - - - - - - -	3813	8,522,574 – 8,522,676	+	3	120	84.21	-2.36	0.89	0.969573
				3814	8,522,574 – 8,522,676	-	3	120	84.21	-1.81	0.69	0.533417
				3815	8,522,596 – 8,522,713	+	3	120	97.20	-2.21	0.99	0.948397
2317	2R_DroMel_CAF1	8,523,961 – 8,524,065	- - - - - - - - -	3816	8,523,961 – 8,524,065	+	3	120	85.59	-1.65	0.89	0.789501
2318	2R_DroMel_CAF1	8,525,210 – 8,525,316	- - - - - - - - -	3817	8,525,210 – 8,525,316	-	3	120	76.88	-1.73	0.68	0.884348
2319	2R_DroMel_CAF1	8,526,088 – 8,526,207	- - - - - - - - -	3818	8,526,088 – 8,526,207	+	4	120	91.63	-2.24	0.91	0.977217
2320	2R_DroMel_CAF1	8,529,139 – 8,529,297	- - - - - - - - -	3819	8,529,139 – 8,529,257	+	4	120	94.29	-2.14	0.82	0.784817
2320	2R_DroMel_CAF1	8,529,139 – 8,529,297	- - - - - - - - -	3820	8,529,179 – 8,529,297	+	4	120	94.43	-2.14	0.82	0.795076
2321	2R_DroMel_CAF1	8,529,337 – 8,529,495	- - - - - - - - -	3821	8,529,337 – 8,529,455	+	4	120	96.22	-1.90	0.97	0.909108
2321	2R_DroMel_CAF1	8,529,337 – 8,529,495	- - - - - - - - -	3822	8,529,377 – 8,529,495	+	4	120	94.96	-1.77	0.86	0.699747
2322	2R_DroMel_CAF1	8,529,965 – 8,530,155	- - - - - - - - -	3823	8,529,965 – 8,530,079	+	3	115	84.59	-1.78	0.72	0.534171
				3824	8,529,965 – 8,530,079	-	3	115	84.59	-1.86	0.77	0.646490
				3825	8,530,001 – 8,530,119	-	4	119	80.25	-2.85	0.60	0.987909
				3826	8,530,040 – 8,530,155	+	4	120	91.95	-1.35	0.91	0.578731
2323	2R_DroMel_CAF1	8,530,529 – 8,530,643	- - - - - - - - -	3827	8,530,529 – 8,530,643	-	4	120	93.32	-1.73	0.82	0.660057
2324	2R_DroMel_CAF1	8,531,509 – 8,531,628	- - - - - - - - -	3828	8,531,509 – 8,531,628	-	4	120	90.68	-2.87	0.78	0.947273
2325	2R_DroMel_CAF1	8,531,666 – 8,531,786	- - - - - - - - -	3829	8,531,666 – 8,531,786	+	4	120	94.12	-2.06	0.86	0.879733
2326	2R_DroMel_CAF1	8,531,961 – 8,532,161	- - - - - - - - -	3830	8,531,961 – 8,532,081	-	4	120	95.40	-1.76	0.92	0.809784
2326	2R_DroMel_CAF1	8,531,961 – 8,532,161	- - - - - - - - -	3831	8,532,041 – 8,532,161	+	4	120	96.25	-1.74	0.89	0.658288
2327	2R_DroMel_CAF1	8,534,017 – 8,534,137	- - - - - - - - -	3832	8,534,017 – 8,534,137	+	4	120	95.56	-2.52	0.93	0.978732
2327	2R_DroMel_CAF1	8,534,017 – 8,534,137	- - - - - - - - -	3833	8,534,017 – 8,534,137	-	4	120	95.56	-1.55	0.92	0.640484
2328	2R_DroMel_CAF1	8,534,240 – 8,534,432	- - - - - - - - -	3834	8,534,240 – 8,534,360	+	4	120	88.24	-2.71	0.68	0.851138
				3835	8,534,240 – 8,534,360	-	4	120	88.24	-2.01	0.80	0.879998
				3836	8,534,280 – 8,534,395	+	4	120	85.82	-3.35	0.69	0.979256
				3837	8,534,280 – 8,534,395	-	4	120	85.82	-3.18	0.85	0.996366
				3838	8,534,320 – 8,534,432	+	4	120	84.78	-2.39	0.70	0.927850
				3839	8,534,320 – 8,534,432	-	4	120	84.78	-1.69	0.79	0.731845
2329	2R_DroMel_CAF1	8,539,288 – 8,539,460	- - - - - - - - -	3840	8,539,288 – 8,539,380	-	5	113	82.03	-2.09	0.71	0.892063
				3841	8,539,328 – 8,539,420	+	5	113	82.42	-3.23	0.66	0.993441
				3842	8,539,328 – 8,539,420	-	5	113	82.42	-3.98	0.63	0.997684
				3843	8,539,347 – 8,539,460	-	5	113	95.57	-1.82	0.86	0.964334
2330	2R_DroMel_CAF1	8,540,931 – 8,541,035	- - - - - - - - -	3844	8,540,931 – 8,541,035	+	3	106	84.04	-2.49	0.69	0.861344
2331	2R_DroMel_CAF1	8,541,386 – 8,541,525	- - - - - - - - -	3845	8,541,386 – 8,541,485	-	4	103	82.14	-1.52	0.71	0.533099
2331	2R_DroMel_CAF1	8,541,386 – 8,541,525	- - - - - - - - -	3846	8,541,405 – 8,541,525	+	5	120	88.36	-1.64	0.75	0.611450
2332	2R_DroMel_CAF1	8,542,700 – 8,542,894	- - - - - - - - -	3847	8,542,700 – 8,542,815	-	5	120	85.81	-1.67	0.78	0.677955
2332	2R_DroMel_CAF1	8,542,700 – 8,542,894	- - - - - - - - -	3848	8,542,778 – 8,542,894	-	5	120	77.44	-1.66	0.59	0.568616
2333	2R_DroMel_CAF1	8,544,051 – 8,544,143	- - - - - - - - -	3849	8,544,051 – 8,544,143	+	3	92	91.18	-2.53	1.00	0.992595
2334	2R_DroMel_CAF1	8,544,480 – 8,544,598	- - - - - - - - -	3850	8,544,480 – 8,544,598	-	5	120	93.06	-2.19	0.74	0.715091
2335	2R_DroMel_CAF1	8,545,326 – 8,545,440	- - - - - - - - -	3851	8,545,326 – 8,545,440	+	5	120	95.50	-1.64	0.92	0.980219
2335	2R_DroMel_CAF1	8,545,326 – 8,545,440	- - - - - - - - -	3852	8,545,326 – 8,545,440	-	5	120	95.50	-2.82	1.00	0.999987
2336	2R_DroMel_CAF1	8,548,134 – 8,548,226	- - - - - - - - -	3853	8,548,134 – 8,548,226	+	5	120	86.46	-1.46	0.84	0.569216
2337	2R_DroMel_CAF1	8,548,336 – 8,548,453	- - - - - - - - -	3854	8,548,336 – 8,548,453	-	5	120	94.91	-1.84	0.92	0.995400
2338	2R_DroMel_CAF1	8,548,663 – 8,548,774	- - - - - - - - -	3855	8,548,663 – 8,548,774	-	5	120	83.20	-1.91	0.60	0.537215
2339	2R_DroMel_CAF1	8,548,955 – 8,549,108	- - - - - - - - -	3856	8,548,955 – 8,549,071	-	5	120	94.04	-1.31	0.85	0.639014
				3857	8,548,995 – 8,549,108	+	5	120	92.21	-2.53	0.83	0.996023
				3858	8,548,995 – 8,549,108	-	5	120	92.21	-1.37	0.80	0.520697
2340	2R_DroMel_CAF1	8,550,019 – 8,550,131	- - - - - - - - -	3859	8,550,019 – 8,550,131	-	5	120	86.08	-1.53	0.83	0.618018
2341	2R_DroMel_CAF1	8,550,787 – 8,550,907	- - - - - - - - -	3860	8,550,787 – 8,550,907	-	5	120	95.08	-2.03	0.78	0.755755
2342	2R_DroMel_CAF1	8,551,419 – 8,551,759	- - - - - - - - -	3861	8,551,419 – 8,551,526	+	5	120	87.49	-1.69	0.74	0.632721
				3862	8,551,526 – 8,551,642	+	5	120	94.35	-2.35	0.94	0.999812
				3863	8,551,526 – 8,551,642	-	5	120	94.35	-1.78	1.00	0.998662
				3864	8,551,642 – 8,551,759	-	5	120	91.05	-2.47	0.74	0.910796
2343	2R_DroMel_CAF1	8,554,038 – 8,554,138	- - - - - - - - -	3865	8,554,038 – 8,554,138	-	5	120	82.35	-3.10	0.60	0.984703
2344	2R_DroMel_CAF1	8,554,327 – 8,554,443	- - - - - - - - -	3866	8,554,327 – 8,554,443	-	5	120	91.97	-1.83	0.81	0.906542
2345	2R_DroMel_CAF1	8,554,709 – 8,554,823	- - - - - - - - -	3867	8,554,709 – 8,554,823	+	5	120	93.74	-1.10	0.91	0.514634
2345	2R_DroMel_CAF1	8,554,709 – 8,554,823	- - - - - - - - -	3868	8,554,709 – 8,554,823	-	5	120	93.74	-1.30	0.85	0.594733
2346	2R_DroMel_CAF1	8,555,553 – 8,555,710	- - - - - - - - -	3869	8,555,553 – 8,555,670	-	5	120	83.56	-1.57	0.70	0.507665
				3870	8,555,592 – 8,555,710	+	5	120	72.98	-2.31	0.69	0.997022
				3871	8,555,592 – 8,555,710	-	5	120	72.98	-2.78	0.53	0.999232
2347	2R_DroMel_CAF1	8,556,617 – 8,556,728	- - - - - - - - -	3872	8,556,617 – 8,556,728	+	4	120	85.69	-2.09	0.70	0.841830
2347	2R_DroMel_CAF1	8,556,617 – 8,556,728	- - - - - - - - -	3873	8,556,617 – 8,556,728	-	4	120	85.69	-1.96	0.76	0.852568
2348	2R_DroMel_CAF1	8,557,479 – 8,557,638	- - - - - - - - -	3874	8,557,479 – 8,557,598	-	5	120	84.89	-1.75	0.71	0.623906
2348	2R_DroMel_CAF1	8,557,479 – 8,557,638	- - - - - - - - -	3875	8,557,518 – 8,557,638	+	5	120	91.49	-1.71	0.82	0.874853
2349	2R_DroMel_CAF1	8,557,671 – 8,557,787	- - - - - - - - -	3876	8,557,671 – 8,557,787	+	4	116	76.87	-2.26	0.63	0.974066
2350	2R_DroMel_CAF1	8,558,119 – 8,558,239	- - "RNAmicro=f:8558119_t:8558238_strand:+_p:0.836958" - - - - - -	3877	8,558,119 – 8,558,239	+	5	120	87.75	-1.56	0.81	0.686834
2351	2R_DroMel_CAF1	8,558,434 – 8,558,705	- - - - - - - - -	3878	8,558,434 – 8,558,547	+	5	120	84.38	-4.26	0.62	0.993472
				3879	8,558,434 – 8,558,547	-	5	120	84.38	-2.16	0.59	0.571824
				3880	8,558,467 – 8,558,586	+	5	120	85.15	-2.57	0.64	0.856032
				3881	8,558,467 – 8,558,586	-	5	120	85.15	-1.72	0.70	0.590920
				3882	8,558,547 – 8,558,665	+	5	120	94.88	-1.65	0.84	0.868200
				3883	8,558,586 – 8,558,705	+	5	120	99.33	-1.80	0.94	0.964582
2352	2R_DroMel_CAF1	8,560,061 – 8,560,229	- - - - - - - - -	3884	8,560,061 – 8,560,179	-	5	118	98.31	-1.43	0.98	0.910994
				3885	8,560,139 – 8,560,229	+	5	91	80.09	-2.60	0.50	0.955393
				3886	8,560,139 – 8,560,229	-	5	91	80.09	-3.01	0.60	0.995106
2353	2R_DroMel_CAF1	8,560,660 – 8,560,770	- - - - - - - - -	3887	8,560,660 – 8,560,770	-	5	120	91.75	-1.44	0.81	0.634785
2354	2R_DroMel_CAF1	8,560,926 – 8,561,029	- - - - - - - - -	3888	8,560,926 – 8,561,029	+	5	111	92.07	-1.44	0.89	0.876743
2355	2R_DroMel_CAF1	8,561,924 – 8,562,026	- - - - - - - - -	3889	8,561,924 – 8,562,026	-	4	110	87.15	-2.00	0.93	0.961658
2356	2R_DroMel_CAF1	8,564,275 – 8,564,370	- - - - - - - - -	3890	8,564,275 – 8,564,370	+	5	96	95.61	-1.15	0.93	0.635768
2357	2R_DroMel_CAF1	8,565,825 – 8,566,028	- - - - - - - - -	3891	8,565,825 – 8,565,923	-	3	98	94.52	-1.54	1.00	0.762319
				3892	8,565,901 – 8,565,995	-	5	114	74.34	-1.30	0.67	0.536644
				3893	8,565,923 – 8,566,028	+	5	107	91.17	-2.55	0.79	0.982646
				3894	8,565,923 – 8,566,028	-	5	107	91.17	-1.61	0.76	0.603296
2358	2R_DroMel_CAF1	8,566,195 – 8,566,287	- - - - - - - - -	3895	8,566,195 – 8,566,287	+	5	92	96.52	-1.26	0.89	0.614361
2359	2R_DroMel_CAF1	8,569,091 – 8,569,225	- - - - - - - - -	3896	8,569,091 – 8,569,185	+	5	94	95.32	-2.44	0.88	0.998500
2359	2R_DroMel_CAF1	8,569,091 – 8,569,225	- - - - - - - - -	3897	8,569,109 – 8,569,225	+	6	120	81.30	-1.66	0.65	0.623127
2360	2R_DroMel_CAF1	8,570,244 – 8,570,353	- - - - - - - - -	3898	8,570,244 – 8,570,353	+	5	109	85.77	-2.23	0.65	0.721952
2361	2R_DroMel_CAF1	8,573,567 – 8,573,687	- - - - - - - - -	3899	8,573,567 – 8,573,687	-	5	120	79.65	-1.76	0.74	0.838956
2362	2R_DroMel_CAF1	8,582,155 – 8,582,260	- - - - - - - - -	3900	8,582,155 – 8,582,260	+	6	117	75.75	-2.09	0.43	0.694309
2362	2R_DroMel_CAF1	8,582,155 – 8,582,260	- - - - - - - - -	3901	8,582,155 – 8,582,260	-	6	117	75.75	-2.39	0.43	0.920615
2363	2R_DroMel_CAF1	8,586,964 – 8,587,069	- - - - - - - - -	3902	8,586,964 – 8,587,069	-	6	117	71.43	-2.04	0.44	0.918149
2364	2R_DroMel_CAF1	8,588,440 – 8,588,569	- - - "knownCDS=Parent=FBtr0087794;Name=Drl-2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3915-RB" - - - - -	3903	8,588,440 – 8,588,541	+	6	112	75.84	-2.04	0.46	0.764667
2364	2R_DroMel_CAF1	8,588,440 – 8,588,569		3904	8,588,462 – 8,588,569	+	6	120	78.32	-1.78	0.57	0.689129
2365	2R_DroMel_CAF1	8,588,987 – 8,589,077	- - - - - - - - -	3905	8,588,987 – 8,589,077	-	6	109	71.94	-2.71	0.44	0.995611
2366	2R_DroMel_CAF1	8,590,345 – 8,590,445	- - - - - - - - -	3906	8,590,345 – 8,590,445	-	4	100	96.33	-2.31	0.96	0.964946
2367	2R_DroMel_CAF1	8,596,822 – 8,596,953	- - - - - - - - -	3907	8,596,822 – 8,596,927	+	6	111	72.55	-2.26	0.36	0.894491
				3908	8,596,822 – 8,596,927	-	6	111	72.55	-2.66	0.48	0.995360
				3909	8,596,859 – 8,596,953	+	3	94	98.58	-2.97	0.96	0.979955
2368	2R_DroMel_CAF1	8,598,154 – 8,598,265	- - - - - - - - -	3910	8,598,154 – 8,598,265	+	4	118	89.08	-2.48	0.72	0.863379
2368	2R_DroMel_CAF1	8,598,154 – 8,598,265	- - - - - - - - -	3911	8,598,154 – 8,598,265	-	4	118	89.08	-2.15	0.71	0.747008
2369	2R_DroMel_CAF1	8,600,873 – 8,600,977	- - - - - - - - -	3912	8,600,873 – 8,600,977	-	6	120	75.76	-1.59	0.59	0.757774
2370	2R_DroMel_CAF1	8,608,577 – 8,608,722	- - - - - - - - -	3913	8,608,577 – 8,608,682	+	5	120	81.76	-1.85	0.58	0.530542
2370	2R_DroMel_CAF1	8,608,577 – 8,608,722	- - - - - - - - -	3914	8,608,617 – 8,608,722	-	5	120	83.65	-3.32	0.57	0.967294
2371	2R_DroMel_CAF1	8,609,577 – 8,609,697	- - - - - - - - -	3915	8,609,577 – 8,609,697	-	5	120	89.60	-1.43	0.77	0.500000
2372	2R_DroMel_CAF1	8,609,712 – 8,609,954	- - - - - - - - -	3916	8,609,712 – 8,609,815	+	5	120	85.31	-1.56	0.75	0.540755
				3917	8,609,775 – 8,609,881	+	5	120	87.10	-2.21	0.73	0.871580
				3918	8,609,775 – 8,609,881	-	5	120	87.10	-3.79	0.77	0.998217
				3919	8,609,815 – 8,609,914	+	5	120	80.95	-2.40	0.69	0.967081
				3920	8,609,815 – 8,609,914	-	5	120	80.95	-3.83	0.78	0.999352
				3921	8,609,847 – 8,609,954	-	5	120	82.19	-1.84	0.69	0.738395
2373	2R_DroMel_CAF1	8,610,174 – 8,610,325	- - - - - - - - -	3922	8,610,174 – 8,610,292	-	5	120	97.14	-2.13	0.85	0.974622
2373	2R_DroMel_CAF1	8,610,174 – 8,610,325	- - - - - - - - -	3923	8,610,214 – 8,610,325	+	5	120	90.66	-1.97	0.71	0.575151
2374	2R_DroMel_CAF1	8,611,677 – 8,611,797	- - - - - - - - -	3924	8,611,677 – 8,611,797	+	5	120	98.50	-1.41	0.99	0.903964
2375	2R_DroMel_CAF1	8,611,906 – 8,612,099	- - "RNAmicro=f:8611906_t:8612025_strand:+_p:0.995810" - - - - - -	3925	8,611,906 – 8,612,020	+	5	120	92.64	-3.64	0.81	0.998855
				3926	8,611,906 – 8,612,020	-	5	120	92.64	-2.79	0.90	0.999876
				3927	8,611,946 – 8,612,059	+	5	120	92.43	-1.96	0.79	0.903294
				3928	8,611,946 – 8,612,059	-	5	120	92.43	-1.56	0.82	0.785477
				3929	8,611,980 – 8,612,099	+	5	120	95.23	-1.56	0.86	0.875547
2376	2R_DroMel_CAF1	8,612,404 – 8,612,504	- - - - - - - - -	3930	8,612,404 – 8,612,504	+	5	120	89.28	-1.49	0.81	0.659662
2377	2R_DroMel_CAF1	8,612,606 – 8,612,713	- - - - - - - - -	3931	8,612,606 – 8,612,713	-	4	110	90.94	-1.60	0.93	0.844231
2378	2R_DroMel_CAF1	8,612,819 – 8,612,958	- - - - - - - - -	3932	8,612,819 – 8,612,919	-	3	119	81.23	-1.98	0.62	0.636181
2378	2R_DroMel_CAF1	8,612,819 – 8,612,958	- - - - - - - - -	3933	8,612,858 – 8,612,958	-	5	120	68.73	-1.77	0.39	0.633383
2379	2R_DroMel_CAF1	8,614,054 – 8,614,243	- - - - - - - - -	3934	8,614,054 – 8,614,169	+	4	120	80.14	-1.74	0.66	0.661738
				3935	8,614,054 – 8,614,169	-	4	120	80.14	-2.23	0.64	0.926992
				3936	8,614,093 – 8,614,209	+	4	120	79.80	-1.78	0.64	0.655775
				3937	8,614,133 – 8,614,243	+	5	120	82.25	-1.91	0.72	0.815929
2380	2R_DroMel_CAF1	8,615,094 – 8,615,327	- - - - - - - - -	3938	8,615,094 – 8,615,207	+	5	120	84.80	-2.16	0.69	0.828550
2380	2R_DroMel_CAF1	8,615,094 – 8,615,327	- - - - - - - - -	3939	8,615,207 – 8,615,327	+	5	120	96.83	-1.55	0.91	0.930058
2381	2R_DroMel_CAF1	8,615,766 – 8,615,877	- - - - - - - - -	3940	8,615,766 – 8,615,877	+	5	120	93.51	-1.30	0.94	0.884534
2382	2R_DroMel_CAF1	8,616,462 – 8,616,582	- - - - - - - - -	3941	8,616,462 – 8,616,582	+	4	120	97.08	-1.46	0.98	0.524528
2383	2R_DroMel_CAF1	8,617,449 – 8,617,609	- - - - - - - - -	3942	8,617,449 – 8,617,569	+	5	120	89.31	-1.67	0.73	0.550407
2383	2R_DroMel_CAF1	8,617,449 – 8,617,609	- - - - - - - - -	3943	8,617,489 – 8,617,609	+	5	120	89.24	-1.83	0.72	0.596806
2384	2R_DroMel_CAF1	8,617,726 – 8,617,837	- - - - - - - - -	3944	8,617,726 – 8,617,837	+	5	120	91.92	-1.45	0.82	0.697682
2384	2R_DroMel_CAF1	8,617,726 – 8,617,837	- - - - - - - - -	3945	8,617,726 – 8,617,837	-	5	120	91.92	-1.77	0.83	0.933717
2385	2R_DroMel_CAF1	8,618,599 – 8,618,758	- - - - - - - - -	3946	8,618,599 – 8,618,693	+	5	120	71.49	-1.75	0.42	0.641524
				3947	8,618,599 – 8,618,693	-	5	120	71.49	-1.65	0.26	0.515875
				3948	8,618,668 – 8,618,758	+	4	109	80.66	-2.08	0.60	0.782958
2386	2R_DroMel_CAF1	8,619,322 – 8,619,423	- - - - - - - - -	3949	8,619,322 – 8,619,423	+	5	120	74.88	-1.90	0.44	0.761412
2387	2R_DroMel_CAF1	8,620,643 – 8,620,735	- - - - - - - - -	3950	8,620,643 – 8,620,735	+	5	117	65.38	-1.66	0.47	0.649206
2388	2R_DroMel_CAF1	8,621,334 – 8,621,430	- - - - - - - - -	3951	8,621,334 – 8,621,430	-	5	119	76.79	-2.39	0.34	0.972914
2389	2R_DroMel_CAF1	8,623,459 – 8,623,599	- - - - - - - - -	3952	8,623,459 – 8,623,572	+	6	118	86.45	-2.94	0.78	0.849500
2389	2R_DroMel_CAF1	8,623,459 – 8,623,599	- - - - - - - - -	3953	8,623,499 – 8,623,599	+	4	101	96.35	-2.36	0.98	0.975902
2390	2R_DroMel_CAF1	8,626,985 – 8,627,081	- - - - - - - - -	3954	8,626,985 – 8,627,081	+	6	105	80.78	-1.98	0.61	0.728045
2391	2R_DroMel_CAF1	8,627,098 – 8,627,258	- - - - - - - - -	3955	8,627,098 – 8,627,194	+	6	96	78.83	-1.85	0.73	0.922354
2391	2R_DroMel_CAF1	8,627,098 – 8,627,258	- - - - - - - - -	3956	8,627,159 – 8,627,258	-	5	100	86.96	-1.77	0.76	0.735141
2392	2R_DroMel_CAF1	8,629,564 – 8,629,655	- - - - - - - - -	3957	8,629,564 – 8,629,655	+	6	108	82.79	-1.48	0.73	0.542000
2393	2R_DroMel_CAF1	8,633,193 – 8,633,320	- - - - - - - - -	3958	8,633,193 – 8,633,283	+	6	98	86.40	-3.32	0.74	0.807875
2393	2R_DroMel_CAF1	8,633,193 – 8,633,320	- - - - - - - - -	3959	8,633,217 – 8,633,320	+	6	103	94.75	-1.19	0.90	0.665913
2394	2R_DroMel_CAF1	8,633,751 – 8,633,878	- - - - - - - - -	3960	8,633,751 – 8,633,846	+	3	96	88.85	-3.00	0.87	0.965549
				3961	8,633,751 – 8,633,846	-	3	96	88.85	-2.49	0.76	0.740712
				3962	8,633,780 – 8,633,878	-	3	99	90.51	-2.42	0.78	0.700781
2395	2R_DroMel_CAF1	8,636,557 – 8,636,676	- - - - - - - - -	3963	8,636,557 – 8,636,676	+	5	120	74.48	-2.24	0.31	0.975352
2396	2R_DroMel_CAF1	8,638,168 – 8,638,263	- - - - - - - - -	3964	8,638,168 – 8,638,263	-	6	120	71.93	-1.44	0.60	0.785121
2397	2R_DroMel_CAF1	8,638,884 – 8,638,999	- - - - - - - - -	3965	8,638,884 – 8,638,999	+	4	120	85.63	-2.06	0.68	0.793636
2398	2R_DroMel_CAF1	8,639,239 – 8,639,359	- - - "knownCDS=Parent=FBtr0087722;Name=CG13325-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13325-RA" - - - - -	3966	8,639,239 – 8,639,359	-	4	120	83.87	-2.46	0.77	0.974183
2399	2R_DroMel_CAF1	8,639,478 – 8,639,595	- - - "knownCDS=Parent=FBtr0087722;Name=CG13325-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13325-RA" - - - - -	3967	8,639,478 – 8,639,595	+	4	120	87.17	-1.46	0.70	0.527990
2400	2R_DroMel_CAF1	8,639,715 – 8,639,912	- - - "knownCDS=Parent=FBtr0087722;Name=CG13325-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13325-RA" - - - - -	3968	8,639,715 – 8,639,832	-	4	120	87.48	-3.17	0.74	0.971281
				3969	8,639,755 – 8,639,872	+	4	120	86.78	-2.04	0.65	0.679721
				3970	8,639,755 – 8,639,872	-	4	120	86.78	-2.48	0.69	0.886356
				3971	8,639,795 – 8,639,912	-	4	120	88.19	-2.43	0.83	0.970371
2401	2R_DroMel_CAF1	8,640,369 – 8,640,529	- - - "knownCDS=Parent=FBtr0087722;Name=CG13325-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13325-RA" - - - - -	3972	8,640,369 – 8,640,489	+	4	120	91.94	-1.20	1.00	0.570420
				3973	8,640,369 – 8,640,489	-	4	120	91.94	-1.49	0.92	0.742968
				3974	8,640,409 – 8,640,529	+	4	120	89.44	-1.33	0.88	0.534332
				3975	8,640,409 – 8,640,529	-	4	120	89.44	-1.47	0.84	0.623538
2402	2R_DroMel_CAF1	8,640,569 – 8,640,685	- - - - - - - - -	3976	8,640,569 – 8,640,685	+	4	120	85.51	-2.23	0.74	0.915812
2403	2R_DroMel_CAF1	8,640,882 – 8,641,318	- - - "knownCDS=Parent=FBtr0087722;Name=CG13325-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13325-RA" - - - - -	3977	8,640,882 – 8,640,998	+	4	116	88.17	-1.77	0.68	0.584183
				3978	8,640,882 – 8,640,998	-	4	116	88.17	-2.34	0.69	0.795956
				3979	8,640,918 – 8,641,038	+	4	120	93.06	-2.44	0.84	0.943390
				3980	8,640,918 – 8,641,038	-	4	120	93.06	-1.84	0.81	0.706922
				3981	8,640,958 – 8,641,078	+	4	120	94.44	-1.63	0.91	0.760239
				3982	8,641,078 – 8,641,198	+	4	120	90.14	-1.42	0.78	0.500000
				3983	8,641,198 – 8,641,318	+	4	120	95.83	-1.91	0.91	0.856850
2404	2R_DroMel_CAF1	8,641,398 – 8,641,511	- - - "knownCDS=Parent=FBtr0087722;Name=CG13325-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13325-RA" - - - - -	3984	8,641,398 – 8,641,511	-	5	113	85.75	-1.75	0.67	0.523662
2405	2R_DroMel_CAF1	8,648,449 – 8,648,548	- - - - - - - - -	3985	8,648,449 – 8,648,548	+	5	112	71.16	-1.98	0.39	0.898980
2406	2R_DroMel_CAF1	8,649,411 – 8,649,509	- - - - - - - - -	3986	8,649,411 – 8,649,509	-	6	103	81.07	-1.44	0.69	0.625630
2407	2R_DroMel_CAF1	8,664,582 – 8,664,675	- - - "knownCDS=Parent=FBtr0087777;Name=PR2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3969-RB" - - - - -	3987	8,664,582 – 8,664,675	+	6	96	82.27	-1.95	0.59	0.500000
2408	2R_DroMel_CAF1	8,674,981 – 8,675,126	- - - - - - - - -	3988	8,674,981 – 8,675,091	-	5	116	88.73	-1.78	0.82	0.883622
				3989	8,675,017 – 8,675,126	+	5	115	85.97	-1.83	0.69	0.617140
				3990	8,675,017 – 8,675,126	-	5	115	85.97	-2.37	0.69	0.849184
2409	2R_DroMel_CAF1	8,678,476 – 8,678,581	- - - "knownCDS=Parent=FBtr0087728;Name=Nrk-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4007-RA" - - - - -	3991	8,678,476 – 8,678,581	-	6	117	72.58	-1.92	0.49	0.887160
2410	2R_DroMel_CAF1	8,681,222 – 8,681,323	- - - - - - - - -	3992	8,681,222 – 8,681,323	-	4	102	85.48	-1.48	0.71	0.549542
2411	2R_DroMel_CAF1	8,681,527 – 8,681,620	- - - - - - - - -	3993	8,681,527 – 8,681,620	-	3	93	68.10	-2.13	0.46	0.765771
2412	2R_DroMel_CAF1	8,683,053 – 8,683,167	- - - - - - - - -	3994	8,683,053 – 8,683,167	+	3	120	89.27	-2.26	0.84	0.804910
2413	2R_DroMel_CAF1	8,683,523 – 8,683,643	- - - - - - - - -	3995	8,683,523 – 8,683,643	-	3	120	83.61	-1.37	0.86	0.601217
2414	2R_DroMel_CAF1	8,687,221 – 8,687,404	- - - - - - - - -	3996	8,687,221 – 8,687,314	+	6	109	82.44	-2.05	0.64	0.647458
2414	2R_DroMel_CAF1	8,687,221 – 8,687,404	- - - - - - - - -	3997	8,687,314 – 8,687,404	-	5	94	80.85	-1.83	0.63	0.689088
2415	2R_DroMel_CAF1	8,687,521 – 8,687,613	- - - - - - - - -	3998	8,687,521 – 8,687,613	+	4	97	86.11	-2.56	0.77	0.968009
2415	2R_DroMel_CAF1	8,687,521 – 8,687,613	- - - - - - - - -	3999	8,687,521 – 8,687,613	-	4	97	86.11	-2.69	0.71	0.946612
2416	2R_DroMel_CAF1	8,687,912 – 8,688,003	- - - - - - - - -	4000	8,687,912 – 8,688,003	-	5	108	74.54	-2.08	0.41	0.919946
2417	2R_DroMel_CAF1	8,697,546 – 8,697,666	- - - "knownCDS=Parent=FBtr0100501;Name=seq-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32904-RA" - - - - -	4001	8,697,546 – 8,697,666	-	6	120	81.83	-1.55	0.64	0.500000
2418	2R_DroMel_CAF1	8,699,603 – 8,699,721	- - - - - - - - -	4002	8,699,603 – 8,699,701	-	6	112	65.75	-3.55	0.26	0.994074
				4003	8,699,625 – 8,699,721	+	6	103	67.26	-2.53	0.21	0.856107
				4004	8,699,625 – 8,699,721	-	6	103	67.26	-2.97	0.23	0.974518
2419	2R_DroMel_CAF1	8,709,075 – 8,709,169	- - - - - - - - -	4005	8,709,075 – 8,709,169	+	5	112	82.37	-2.69	0.37	0.704808
2420	2R_DroMel_CAF1	8,709,998 – 8,710,105	- - - - - - - - -	4006	8,709,998 – 8,710,105	+	5	117	90.76	-2.33	0.78	0.963285
2420	2R_DroMel_CAF1	8,709,998 – 8,710,105	- - - - - - - - -	4007	8,709,998 – 8,710,105	-	5	117	90.76	-2.36	0.76	0.932616
2421	2R_DroMel_CAF1	8,710,651 – 8,710,751	- - - - - - - - -	4008	8,710,651 – 8,710,751	+	4	106	87.86	-1.57	0.75	0.620824
2422	2R_DroMel_CAF1	8,713,900 – 8,714,029	- - - - - - - - -	4009	8,713,900 – 8,713,998	+	5	111	80.33	-2.38	0.40	0.803981
2422	2R_DroMel_CAF1	8,713,900 – 8,714,029	- - - - - - - - -	4010	8,713,939 – 8,714,029	-	5	102	85.86	-1.62	0.69	0.500000
2423	2R_DroMel_CAF1	8,714,246 – 8,714,349	- - - - - - - - -	4011	8,714,246 – 8,714,349	+	5	109	75.22	-1.40	0.65	0.551545
2423	2R_DroMel_CAF1	8,714,246 – 8,714,349	- - - - - - - - -	4012	8,714,246 – 8,714,349	-	5	109	75.22	-1.21	0.87	0.961572
2424	2R_DroMel_CAF1	8,715,003 – 8,715,114	- - - "knownCDS=Parent=FBtr0087735;Name=Aats-val-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4062-RA" - - - - -	4013	8,715,003 – 8,715,114	+	6	119	76.88	-1.57	0.69	0.894046
2425	2R_DroMel_CAF1	8,715,351 – 8,715,449	- - - - - - - - -	4014	8,715,351 – 8,715,449	+	6	103	81.20	-1.87	0.64	0.708296
2426	2R_DroMel_CAF1	8,715,641 – 8,715,761	- - - "knownCDS=Parent=FBtr0087734, FBtr0087735;Name=Aats-val-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4062-RB, FlyBase+Annotation+IDs:CG4062-RA" - - - - -	4015	8,715,641 – 8,715,761	+	6	120	80.11	-1.92	0.56	0.608003
2427	2R_DroMel_CAF1	8,716,241 – 8,716,361	- - - "knownCDS=Parent=FBtr0087734, FBtr0087735;Name=Aats-val-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4062-RB, FlyBase+Annotation+IDs:CG4062-RA" - - - - -	4016	8,716,241 – 8,716,361	-	6	120	82.83	-1.64	0.77	0.650755
2428	2R_DroMel_CAF1	8,722,588 – 8,722,689	- - - - - - - - -	4017	8,722,588 – 8,722,689	+	5	120	71.13	-2.18	0.43	0.975239
2429	2R_DroMel_CAF1	8,730,528 – 8,730,672	- - - - - - - - -	4018	8,730,528 – 8,730,632	-	3	120	73.64	-2.66	0.53	0.990771
2429	2R_DroMel_CAF1	8,730,528 – 8,730,672	- - - - - - - - -	4019	8,730,568 – 8,730,672	-	3	120	77.36	-1.94	0.69	0.953132
2430	2R_DroMel_CAF1	8,732,023 – 8,732,124	- - - - - - - - -	4020	8,732,023 – 8,732,124	+	6	108	81.96	-2.59	0.62	0.820318
2430	2R_DroMel_CAF1	8,732,023 – 8,732,124	- - - - - - - - -	4021	8,732,023 – 8,732,124	-	6	108	81.96	-2.05	0.59	0.581506
2431	2R_DroMel_CAF1	8,734,581 – 8,734,789	- - - - - - - - -	4022	8,734,581 – 8,734,681	-	4	106	89.00	-1.87	0.93	0.940506
				4023	8,734,621 – 8,734,721	-	4	106	87.22	-1.41	0.77	0.535495
				4024	8,734,647 – 8,734,750	-	5	113	72.06	-1.89	0.27	0.847976
				4025	8,734,681 – 8,734,789	-	4	108	94.14	-1.75	0.81	0.575575
2432	2R_DroMel_CAF1	8,739,808 – 8,739,907	- - - - - - - - -	4026	8,739,808 – 8,739,907	-	4	104	88.18	-1.71	0.67	0.540142
2433	2R_DroMel_CAF1	8,741,122 – 8,741,214	- - - - - - - - -	4027	8,741,122 – 8,741,214	-	6	103	79.31	-1.31	0.66	0.588244
2434	2R_DroMel_CAF1	8,746,178 – 8,746,290	- - - - - - - - -	4028	8,746,178 – 8,746,290	+	3	113	85.16	-3.42	0.57	0.732621
2434	2R_DroMel_CAF1	8,746,178 – 8,746,290	- - - - - - - - -	4029	8,746,178 – 8,746,290	-	3	113	85.16	-2.89	0.84	0.970791
2435	2R_DroMel_CAF1	8,750,263 – 8,750,382	- - - "knownCDS=Parent=FBtr0087760;Name=CG4670-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4670-RA" - - - - -	4030	8,750,263 – 8,750,382	-	6	119	81.46	-1.94	0.60	0.623200
2436	2R_DroMel_CAF1	8,755,255 – 8,755,365	- - - - - - - - -	4031	8,755,255 – 8,755,365	-	5	111	92.17	-2.29	0.74	0.793444
2437	2R_DroMel_CAF1	8,763,314 – 8,763,420	- - - "knownCDS=Parent=FBtr0005009;Name=Mp20-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4696-RB" - - - - -	4032	8,763,314 – 8,763,420	+	6	108	84.29	-1.79	0.81	0.685487
2438	2R_DroMel_CAF1	8,773,617 – 8,773,722	- - - - - - - - -	4033	8,773,617 – 8,773,722	-	6	120	77.39	-1.74	0.52	0.532531
2439	2R_DroMel_CAF1	8,777,848 – 8,777,949	- - - - - - - - -	4034	8,777,848 – 8,777,949	+	5	101	92.77	-1.88	0.91	0.994795
2440	2R_DroMel_CAF1	8,782,424 – 8,782,514	- - - - - - - - -	4035	8,782,424 – 8,782,514	+	5	90	97.33	-1.70	0.87	0.883420
2441	2R_DroMel_CAF1	8,782,661 – 8,782,751	- - - - - - - - -	4036	8,782,661 – 8,782,751	+	5	90	86.43	-1.83	0.80	0.824277
2441	2R_DroMel_CAF1	8,782,661 – 8,782,751	- - - - - - - - -	4037	8,782,661 – 8,782,751	-	5	90	86.43	-2.48	0.83	0.989484
2442	2R_DroMel_CAF1	8,796,891 – 8,796,997	- - - - - - - - -	4038	8,796,891 – 8,796,997	-	4	106	79.70	-1.84	0.64	0.720412
2443	2R_DroMel_CAF1	8,800,205 – 8,800,295	- - - - - - - - -	4039	8,800,205 – 8,800,295	+	3	91	69.32	-1.72	0.57	0.938578
2443	2R_DroMel_CAF1	8,800,205 – 8,800,295	- - - - - - - - -	4040	8,800,205 – 8,800,295	-	3	91	69.32	-1.98	0.52	0.903260
2444	2R_DroMel_CAF1	8,802,259 – 8,802,367	- - - - - - - - -	4041	8,802,259 – 8,802,367	+	5	108	91.34	-2.27	0.78	0.941520
2444	2R_DroMel_CAF1	8,802,259 – 8,802,367	- - - - - - - - -	4042	8,802,259 – 8,802,367	-	5	108	91.34	-3.16	0.85	0.999671
2445	2R_DroMel_CAF1	8,808,082 – 8,808,173	- - - - - - - - -	4043	8,808,082 – 8,808,173	+	6	103	80.59	-2.04	0.69	0.863132
2445	2R_DroMel_CAF1	8,808,082 – 8,808,173	- - - - - - - - -	4044	8,808,082 – 8,808,173	-	6	103	80.59	-3.21	0.47	0.918618
2446	2R_DroMel_CAF1	8,808,758 – 8,808,858	- - - - - - - - -	4045	8,808,758 – 8,808,858	+	6	101	79.65	-2.48	0.44	0.660069
2447	2R_DroMel_CAF1	8,809,713 – 8,809,805	- - - - - - - - -	4046	8,809,713 – 8,809,805	-	6	114	77.01	-1.16	0.65	0.531423
2448	2R_DroMel_CAF1	8,811,217 – 8,811,310	- - - - - - - - -	4047	8,811,217 – 8,811,310	+	6	109	79.32	-1.74	0.67	0.830839
2449	2R_DroMel_CAF1	8,813,378 – 8,813,472	- - - - - - - - -	4048	8,813,378 – 8,813,472	-	6	96	83.13	-2.07	0.76	0.763960
2450	2R_DroMel_CAF1	8,821,901 – 8,822,020	- - - - - - - - -	4049	8,821,901 – 8,822,002	+	6	120	80.53	-1.60	0.66	0.683742
2450	2R_DroMel_CAF1	8,821,901 – 8,822,020	- - - - - - - - -	4050	8,821,923 – 8,822,020	+	6	103	78.50	-1.39	0.64	0.633435
2451	2R_DroMel_CAF1	8,823,079 – 8,823,174	- - - - - - - - -	4051	8,823,079 – 8,823,174	-	6	117	81.87	-2.65	0.80	0.936243
2452	2R_DroMel_CAF1	8,824,057 – 8,824,171	- - - - - - - - -	4052	8,824,057 – 8,824,171	-	3	115	88.86	-2.81	0.86	0.944566
2453	2R_DroMel_CAF1	8,824,211 – 8,824,331	- - - - - - - - -	4053	8,824,211 – 8,824,331	+	5	120	76.27	-1.85	0.50	0.671436
2454	2R_DroMel_CAF1	8,824,567 – 8,824,660	- - - - - - - - -	4054	8,824,567 – 8,824,660	-	6	105	80.28	-2.67	0.40	0.531787
2455	2R_DroMel_CAF1	8,825,751 – 8,825,849	- - - - - - - - -	4055	8,825,751 – 8,825,849	+	3	98	88.44	-1.38	0.92	0.603297
2456	2R_DroMel_CAF1	8,831,340 – 8,831,455	- - - - - - - - -	4056	8,831,340 – 8,831,455	+	6	120	93.62	-3.26	0.80	0.948918
2457	2R_DroMel_CAF1	8,834,438 – 8,834,568	- - - - - - - - -	4057	8,834,438 – 8,834,536	+	6	117	79.62	-1.78	0.65	0.809492
2457	2R_DroMel_CAF1	8,834,438 – 8,834,568	- - - - - - - - -	4058	8,834,468 – 8,834,568	+	6	117	80.49	-1.84	0.57	0.559666
2458	2R_DroMel_CAF1	8,835,680 – 8,835,784	- - - "knownCDS=texon1312;Parent=CG_RGUI_GID_mRNA_40003225, CG_DGIL_SNO_28356026" - - - - -	4059	8,835,680 – 8,835,784	-	6	104	82.54	-1.93	0.73	0.738152
2459	2R_DroMel_CAF1	8,837,279 – 8,837,371	- - - - - - - - -	4060	8,837,279 – 8,837,371	+	5	104	73.77	-1.69	0.20	0.732022
2460	2R_DroMel_CAF1	8,837,601 – 8,837,716	- - - - - - - - -	4061	8,837,601 – 8,837,716	-	4	118	73.23	-1.91	0.63	0.949218
2461	2R_DroMel_CAF1	8,839,231 – 8,839,363	- - - - - - - - -	4062	8,839,231 – 8,839,339	+	6	113	92.57	-1.68	0.90	0.928982
				4063	8,839,270 – 8,839,363	+	6	114	73.41	-1.55	0.65	0.918308
				4064	8,839,270 – 8,839,363	-	6	114	73.41	-1.05	0.65	0.535964
2462	2R_DroMel_CAF1	8,840,894 – 8,840,991	- - - - - - - - -	4065	8,840,894 – 8,840,991	-	4	97	83.69	-1.92	0.87	0.912801
2463	2R_DroMel_CAF1	8,841,437 – 8,841,553	- - - - - - - - -	4066	8,841,437 – 8,841,553	+	4	120	86.00	-1.37	0.86	0.528716
2464	2R_DroMel_CAF1	8,845,302 – 8,845,421	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002254; Name=dme-mir-184" - "RNAmicro=f:8845316_t:8845428_strand:+_p:0.999993" - - - "miRBase=dme-mir-184\|6e-53" - "Flybase=FBgn0067726:mir-184:microRNA_encoding_gene\|8e-07"	4067	8,845,302 – 8,845,396	+	6	120	79.30	-3.47	0.86	0.971154
				4068	8,845,302 – 8,845,396	-	6	120	79.30	-2.97	0.86	0.972274
				4069	8,845,316 – 8,845,421	+	6	113	82.64	-4.85	0.81	0.975460
				4070	8,845,316 – 8,845,421	-	6	113	82.64	-4.07	0.71	0.953543
2465	2R_DroMel_CAF1	8,855,070 – 8,855,171	- - - - - - - - -	4071	8,855,070 – 8,855,171	-	6	106	78.22	-2.19	0.44	0.568763
2466	2R_DroMel_CAF1	8,855,813 – 8,855,912	- - - - - - - - -	4072	8,855,813 – 8,855,912	-	6	108	92.65	-1.06	0.92	0.630734
2467	2R_DroMel_CAF1	8,859,316 – 8,859,440	- - - - - - - - -	4073	8,859,316 – 8,859,418	+	6	108	75.28	-1.05	0.72	0.753097
				4074	8,859,346 – 8,859,440	+	6	110	87.80	-2.27	0.93	0.990397
				4075	8,859,346 – 8,859,440	-	6	110	87.80	-2.99	0.84	0.967249
2468	2R_DroMel_CAF1	8,860,062 – 8,860,166	- - - - - - - - -	4076	8,860,062 – 8,860,166	+	6	107	84.40	-2.92	0.61	0.550336
2469	2R_DroMel_CAF1	8,861,984 – 8,862,132	- - - - - - - - -	4077	8,861,984 – 8,862,103	-	5	120	75.58	-1.99	0.48	0.851679
2469	2R_DroMel_CAF1	8,861,984 – 8,862,132	- - - - - - - - -	4078	8,862,024 – 8,862,132	-	5	117	82.51	-2.46	0.50	0.744476
2470	2R_DroMel_CAF1	8,865,228 – 8,865,323	- - - - - - - - -	4079	8,865,228 – 8,865,323	+	5	95	98.11	-2.72	0.95	0.999742
2470	2R_DroMel_CAF1	8,865,228 – 8,865,323	- - - - - - - - -	4080	8,865,228 – 8,865,323	-	5	95	98.11	-2.45	1.01	0.999796
2471	2R_DroMel_CAF1	8,869,914 – 8,870,059	- - - "knownCDS=Parent=FBtr0087721;Name=CG17048-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17048-RA" - - - - -	4081	8,869,914 – 8,870,019	+	5	105	81.77	-1.78	0.76	0.784851
2471	2R_DroMel_CAF1	8,869,914 – 8,870,059		4082	8,869,954 – 8,870,059	-	6	105	80.32	-2.00	0.65	0.841530
2472	2R_DroMel_CAF1	8,873,533 – 8,873,780	- - - - - - - - -	4083	8,873,533 – 8,873,628	-	6	112	82.15	-2.97	0.44	0.519641
				4084	8,873,601 – 8,873,708	-	6	117	79.88	-2.50	0.55	0.882937
				4085	8,873,668 – 8,873,780	+	5	118	95.10	-2.54	0.93	0.999851
				4086	8,873,668 – 8,873,780	-	5	118	95.10	-2.12	0.98	0.999758
2473	2R_DroMel_CAF1	8,877,754 – 8,877,857	- - - - - - - - -	4087	8,877,754 – 8,877,857	-	6	103	92.10	-1.68	0.84	0.563696
2474	2R_DroMel_CAF1	8,878,410 – 8,878,501	- - - - - - - - -	4088	8,878,410 – 8,878,501	-	5	104	84.70	-1.87	0.65	0.593234
2475	2R_DroMel_CAF1	8,880,822 – 8,880,921	- - - - - - - - -	4089	8,880,822 – 8,880,921	-	6	120	75.93	-2.36	0.56	0.975589
2476	2R_DroMel_CAF1	8,884,482 – 8,884,572	- - - - - - - - -	4090	8,884,482 – 8,884,572	+	6	109	76.85	-2.05	0.52	0.836179
2477	2R_DroMel_CAF1	8,885,379 – 8,885,484	- - - - - - - - -	4091	8,885,379 – 8,885,484	+	6	106	83.10	-2.13	0.71	0.703978
2478	2R_DroMel_CAF1	8,886,614 – 8,886,720	- - - - - - - - -	4092	8,886,614 – 8,886,720	+	6	114	81.92	-1.75	0.66	0.636099
2479	2R_DroMel_CAF1	8,887,209 – 8,887,299	- - - - - - - - -	4093	8,887,209 – 8,887,299	-	5	92	93.63	-1.82	0.78	0.775261
2480	2R_DroMel_CAF1	8,887,699 – 8,887,789	- - - - - - - - -	4094	8,887,699 – 8,887,789	+	6	96	82.96	-3.39	0.70	0.910077
2480	2R_DroMel_CAF1	8,887,699 – 8,887,789	- - - - - - - - -	4095	8,887,699 – 8,887,789	-	6	96	82.96	-4.07	0.59	0.935775
2481	2R_DroMel_CAF1	8,888,528 – 8,888,782	- - - - - - - - -	4096	8,888,528 – 8,888,636	-	5	108	86.11	-2.45	0.72	0.929077
				4097	8,888,556 – 8,888,675	-	5	120	87.77	-1.41	0.80	0.511457
				4098	8,888,675 – 8,888,782	+	5	118	87.12	-1.92	0.74	0.763191
2482	2R_DroMel_CAF1	8,889,165 – 8,889,256	- - - - - - - - -	4099	8,889,165 – 8,889,256	+	6	114	78.09	-2.26	0.40	0.520192
2483	2R_DroMel_CAF1	8,897,000 – 8,897,093	- - - - - - - - -	4100	8,897,000 – 8,897,093	+	6	93	93.05	-3.11	0.95	0.999948
2483	2R_DroMel_CAF1	8,897,000 – 8,897,093	- - - - - - - - -	4101	8,897,000 – 8,897,093	-	6	93	93.05	-1.93	0.90	0.982094
2484	2R_DroMel_CAF1	8,897,311 – 8,897,410	- - - - - - - - -	4102	8,897,311 – 8,897,410	+	6	107	70.09	-2.33	0.19	0.566520
2485	2R_DroMel_CAF1	8,898,490 – 8,898,582	- - - - - - - - -	4103	8,898,490 – 8,898,582	+	5	105	91.67	-2.45	0.77	0.954000
2486	2R_DroMel_CAF1	8,900,709 – 8,900,801	- - - - - - - - -	4104	8,900,709 – 8,900,801	+	6	97	81.44	-1.89	0.78	0.840745
2487	2R_DroMel_CAF1	8,903,055 – 8,903,145	- - - - - - - - -	4105	8,903,055 – 8,903,145	-	5	91	88.17	-2.07	0.75	0.848851
2488	2R_DroMel_CAF1	8,904,650 – 8,904,742	- - - - - - - - -	4106	8,904,650 – 8,904,742	-	4	104	73.81	-1.94	0.57	0.872113
2489	2R_DroMel_CAF1	8,905,589 – 8,905,697	- - - - - - - - -	4107	8,905,589 – 8,905,697	-	6	109	96.36	-1.31	0.91	0.863566
2490	2R_DroMel_CAF1	8,906,581 – 8,906,701	- - - "knownCDS=Parent=FBtr0087719;Name=CG17050-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17050-RA" - - - - -	4108	8,906,581 – 8,906,701	+	4	120	85.56	-1.48	0.72	0.555163
2491	2R_DroMel_CAF1	8,909,037 – 8,909,148	- - - "knownCDS=Parent=FBtr0087718;Name=CG17049-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17049-RA" - - - - -	4109	8,909,037 – 8,909,148	-	6	115	82.85	-2.33	0.57	0.500000
2492	2R_DroMel_CAF1	8,910,935 – 8,911,095	- - - "knownCDS=Parent=FBtr0087717;Name=CG4744-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4744-RA" - - - - -	4110	8,910,935 – 8,911,055	+	5	120	92.67	-2.29	0.75	0.827373
				4111	8,910,975 – 8,911,095	+	5	120	91.75	-1.81	0.75	0.642946
				4112	8,910,975 – 8,911,095	-	5	120	91.75	-1.86	0.75	0.654101
2493	2R_DroMel_CAF1	8,911,255 – 8,911,415	- - - "knownCDS=Parent=FBtr0087717;Name=CG4744-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4744-RA" - - - - -	4113	8,911,255 – 8,911,375	-	5	120	92.33	-1.83	0.90	0.990728
2493	2R_DroMel_CAF1	8,911,255 – 8,911,415		4114	8,911,295 – 8,911,415	-	5	120	90.33	-1.69	0.78	0.749819
2494	2R_DroMel_CAF1	8,912,226 – 8,912,343	- - - "knownCDS=Parent=FBtr0087717;Name=CG4744-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4744-RA" - - - - -	4115	8,912,226 – 8,912,343	+	4	120	87.48	-2.10	0.82	0.925680
2495	2R_DroMel_CAF1	8,915,101 – 8,915,218	- - - "knownCDS=Parent=FBtr0087717;Name=CG4744-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4744-RA" - - - - -	4116	8,915,101 – 8,915,218	-	4	120	91.84	-1.70	0.82	0.697646
2496	2R_DroMel_CAF1	8,915,677 – 8,915,903	- - - - - - - - -	4117	8,915,677 – 8,915,789	-	4	120	82.14	-2.16	0.62	0.821760
				4118	8,915,716 – 8,915,829	-	4	120	83.05	-2.57	0.67	0.961319
				4119	8,915,749 – 8,915,869	-	5	120	90.53	-3.55	0.67	0.830819
				4120	8,915,789 – 8,915,903	+	5	120	93.99	-2.60	0.79	0.979310
				4121	8,915,789 – 8,915,903	-	5	120	93.99	-3.21	0.86	0.999634
2497	2R_DroMel_CAF1	8,916,216 – 8,916,330	- - - - - - - - -	4122	8,916,216 – 8,916,330	+	5	120	88.74	-2.53	0.64	0.523811
2498	2R_DroMel_CAF1	8,916,584 – 8,916,704	- - - - - - - - -	4123	8,916,584 – 8,916,704	-	5	120	90.12	-1.70	0.79	0.784649
2499	2R_DroMel_CAF1	8,916,890 – 8,917,010	- - - - - - - - -	4124	8,916,890 – 8,917,010	-	5	120	98.33	-1.42	0.95	0.862319
2500	2R_DroMel_CAF1	8,917,319 – 8,917,434	- - - - - - - - -	4125	8,917,319 – 8,917,418	+	5	120	90.88	-1.20	0.91	0.605339
				4126	8,917,319 – 8,917,418	-	5	120	90.88	-2.75	0.92	0.999914
				4127	8,917,338 – 8,917,434	-	5	120	84.05	-1.69	0.80	0.709067
2501	2R_DroMel_CAF1	8,917,513 – 8,917,633	- - - - - - - - -	4128	8,917,513 – 8,917,633	+	5	120	95.68	-1.08	0.95	0.573654
2501	2R_DroMel_CAF1	8,917,513 – 8,917,633	- - - - - - - - -	4129	8,917,513 – 8,917,633	-	5	120	95.68	-1.16	0.95	0.724388
2502	2R_DroMel_CAF1	8,919,608 – 8,919,704	- - - - - - - - -	4130	8,919,608 – 8,919,704	+	4	102	82.17	-1.87	0.89	0.925646
2502	2R_DroMel_CAF1	8,919,608 – 8,919,704	- - - - - - - - -	4131	8,919,608 – 8,919,704	-	4	102	82.17	-2.36	0.75	0.970332
2503	2R_DroMel_CAF1	8,919,721 – 8,919,820	- - - - - - - - -	4132	8,919,721 – 8,919,820	+	5	120	78.51	-2.60	0.70	0.994030
2503	2R_DroMel_CAF1	8,919,721 – 8,919,820	- - - - - - - - -	4133	8,919,721 – 8,919,820	-	5	120	78.51	-2.22	0.61	0.948267
2504	2R_DroMel_CAF1	8,922,736 – 8,922,856	- - - - - - - - -	4134	8,922,736 – 8,922,856	-	3	120	85.71	-2.14	0.72	0.663378
2505	2R_DroMel_CAF1	8,940,239 – 8,940,365	- - - - - - - - -	4135	8,940,239 – 8,940,339	-	5	100	92.80	-2.08	0.72	0.544571
2505	2R_DroMel_CAF1	8,940,239 – 8,940,365	- - - - - - - - -	4136	8,940,263 – 8,940,365	+	5	102	92.25	-2.42	0.85	0.997339
2506	2R_DroMel_CAF1	8,941,837 – 8,941,942	- - - - - - - - -	4137	8,941,837 – 8,941,942	+	5	105	87.71	-1.42	0.83	0.565812
2507	2R_DroMel_CAF1	8,942,890 – 8,942,985	- - - - - - - - -	4138	8,942,890 – 8,942,985	-	5	110	75.86	-1.58	0.59	0.500000
2508	2R_DroMel_CAF1	8,943,598 – 8,943,747	- - - - - - - - -	4139	8,943,598 – 8,943,712	+	6	120	82.90	-2.89	0.63	0.788219
2508	2R_DroMel_CAF1	8,943,598 – 8,943,747	- - - - - - - - -	4140	8,943,637 – 8,943,747	+	6	120	83.75	-2.71	0.75	0.832838
2509	2R_DroMel_CAF1	8,946,577 – 8,946,749	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000080; Name=Dmel_Leu_CAA_14000080;TFAMID=DmelLCAA-8946722" "tRNAscan=type:Leu:anticodon:CAA f:8946601_t:8946745_strand=-_cove=72.14" - - "Rfam=K00240.1/1-82_RF00005;tRNA;\|6e-12" - - - "Flybase=FBgn0011909:transfer_RNA:leu:49Fa:cytosolic_tRNA_gene\|1e-65"	4141	8,946,577 – 8,946,671	-	6	113	82.57	-1.33	0.78	0.528093
				4142	8,946,592 – 8,946,709	-	6	120	93.40	-1.10	0.95	0.832990
				4143	8,946,632 – 8,946,749	-	6	119	86.82	-1.76	0.81	0.543875
2510	2R_DroMel_CAF1	8,947,997 – 8,948,100	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000084; Name=Dmel_Ile_AAT_14000084;TFAMID=DmelIAAT-8948000" "tRNAscan=type:Ile:anticodon:AAT f:8947999_t:8948074_strand=+_cove=82.79" - - "Rfam=AC007452.1/104250-104177_RF00005;tRNA;\|5e-36" - - - "Flybase=FBgn0011880:transfer_RNA:ile:42A:cytosolic_tRNA_gene\|7e-38"	4144	8,947,997 – 8,948,100	-	5	120	86.05	-1.77	0.97	0.960998
2511	2R_DroMel_CAF1	8,948,282 – 8,948,378	- - - - - - - - -	4145	8,948,282 – 8,948,378	+	6	116	75.47	-1.75	0.54	0.754370
2512	2R_DroMel_CAF1	8,948,582 – 8,948,734	"known=exon_Parent=Dmel\CR_TRNA_ATT_14000085" - - - "Rfam=BX511020.10/92015-91937_RF00005;tRNA;\|2e-08" - - - "Flybase=FBgn0011910:transfer_RNA:leu:49Fb:cytosolic_tRNA_gene\|1e-64"	4146	8,948,582 – 8,948,701	+	6	120	92.15	-1.07	0.96	0.813331
2512	2R_DroMel_CAF1	8,948,582 – 8,948,734		4147	8,948,621 – 8,948,734	+	6	120	80.78	-1.84	0.74	0.842161
2513	2R_DroMel_CAF1	8,950,919 – 8,951,025	- - - - - - - - -	4148	8,950,919 – 8,951,025	-	5	106	94.71	-1.39	0.87	0.768918
2514	2R_DroMel_CAF1	8,958,582 – 8,958,684	- - - - - - - - -	4149	8,958,582 – 8,958,684	+	5	107	83.46	-3.03	0.62	0.970213
2515	2R_DroMel_CAF1	8,960,371 – 8,960,473	- - - "knownCDS=Parent=FBtr0087705;Name=cnn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4832-RC" - - - - -	4150	8,960,371 – 8,960,473	+	6	102	82.16	-1.80	0.62	0.528281
2516	2R_DroMel_CAF1	8,964,514 – 8,964,623	- - - - - - - - -	4151	8,964,514 – 8,964,623	+	6	119	75.29	-1.88	0.61	0.936722
2516	2R_DroMel_CAF1	8,964,514 – 8,964,623	- - - - - - - - -	4152	8,964,514 – 8,964,623	-	6	119	75.29	-2.23	0.50	0.941577
2517	2R_DroMel_CAF1	8,965,044 – 8,965,135	- - - - - - - - -	4153	8,965,044 – 8,965,135	-	6	106	85.14	-3.10	0.73	0.784517
2518	2R_DroMel_CAF1	8,966,443 – 8,966,542	- - - - - - - - -	4154	8,966,443 – 8,966,542	+	5	99	93.12	-1.79	0.78	0.747010
2519	2R_DroMel_CAF1	8,968,674 – 8,968,770	- - - "knownCDS=Parent=FBtr0087666;Name=CG4840-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4840-RA" - - - - -	4155	8,968,674 – 8,968,770	-	6	99	84.26	-1.68	0.74	0.505541
2520	2R_DroMel_CAF1	8,969,377 – 8,969,531	- - - - - - - - -	4156	8,969,377 – 8,969,491	+	3	114	82.70	-2.61	0.65	0.900891
2520	2R_DroMel_CAF1	8,969,377 – 8,969,531	- - - - - - - - -	4157	8,969,411 – 8,969,531	+	5	120	80.55	-2.03	0.60	0.792623
2521	2R_DroMel_CAF1	8,978,127 – 8,978,222	- - - - - - - - -	4158	8,978,127 – 8,978,222	+	6	105	84.70	-3.11	0.80	0.931481
2522	2R_DroMel_CAF1	8,979,686 – 8,979,780	- - - - - - - - -	4159	8,979,686 – 8,979,780	+	3	94	97.14	-2.38	0.95	0.935429
2523	2R_DroMel_CAF1	8,981,322 – 8,981,412	- - - - - - - - -	4160	8,981,322 – 8,981,412	-	6	92	81.79	-2.06	0.59	0.596965
2524	2R_DroMel_CAF1	8,988,047 – 8,988,147	- - - - - - - - -	4161	8,988,047 – 8,988,147	+	6	106	81.73	-2.43	0.50	0.500000
2525	2R_DroMel_CAF1	8,990,288 – 8,990,402	- - - - - - - - -	4162	8,990,288 – 8,990,402	-	6	114	83.07	-2.06	0.73	0.719637
2526	2R_DroMel_CAF1	8,991,811 – 8,991,902	- - - - - - - - -	4163	8,991,811 – 8,991,902	+	5	102	85.89	-2.64	0.56	0.525917
2527	2R_DroMel_CAF1	8,992,459 – 8,992,557	- - - - - - - - -	4164	8,992,459 – 8,992,557	-	6	103	92.44	-3.34	0.91	0.999780
2528	2R_DroMel_CAF1	8,995,659 – 8,995,756	- - - - - - - - -	4165	8,995,659 – 8,995,756	+	5	113	80.35	-1.89	0.72	0.861250
2529	2R_DroMel_CAF1	8,996,265 – 8,996,399	- - - - - - - - -	4166	8,996,265 – 8,996,359	+	4	96	90.21	-1.58	0.87	0.753497
2529	2R_DroMel_CAF1	8,996,265 – 8,996,399	- - - - - - - - -	4167	8,996,292 – 8,996,399	+	4	109	91.69	-1.98	0.90	0.942071
2530	2R_DroMel_CAF1	8,997,019 – 8,997,125	- - - - - - - - -	4168	8,997,019 – 8,997,125	+	6	112	72.09	-2.11	0.59	0.984472
2530	2R_DroMel_CAF1	8,997,019 – 8,997,125	- - - - - - - - -	4169	8,997,019 – 8,997,125	-	6	112	72.09	-1.22	0.70	0.883767
2531	2R_DroMel_CAF1	8,999,066 – 8,999,169	- - - - - - - - -	4170	8,999,066 – 8,999,169	-	5	103	93.20	-1.46	0.83	0.705445
2532	2R_DroMel_CAF1	9,001,038 – 9,001,130	- - - - - - - - -	4171	9,001,038 – 9,001,130	-	6	96	73.01	-1.51	0.60	0.819897
2533	2R_DroMel_CAF1	9,002,097 – 9,002,203	- - - "knownCDS=Parent=FBtr0087667;Name=cid-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13329-RA" - - - - -	4172	9,002,097 – 9,002,203	-	6	106	79.94	-1.81	0.76	0.883276
2534	2R_DroMel_CAF1	9,012,504 – 9,012,594	- - - - - - - - -	4173	9,012,504 – 9,012,594	+	5	90	94.54	-1.77	0.78	0.646126
2535	2R_DroMel_CAF1	9,014,337 – 9,014,431	- - - - - - - - -	4174	9,014,337 – 9,014,431	-	6	118	69.15	-2.10	0.32	0.830157
2536	2R_DroMel_CAF1	9,026,956 – 9,027,047	- - - "knownCDS=Parent=FBtr0087669;Name=mip120-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6061-RA" - - - - -	4175	9,026,956 – 9,027,047	+	6	91	76.78	-1.94	0.55	0.850290
2537	2R_DroMel_CAF1	9,027,679 – 9,027,777	- - - "knownCDS=Parent=FBtr0087669;Name=mip120-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6061-RA" - - - - -	4176	9,027,679 – 9,027,777	-	6	101	78.65	-2.22	0.63	0.937665
2538	2R_DroMel_CAF1	9,031,068 – 9,031,174	- - - - - - - - -	4177	9,031,068 – 9,031,174	+	6	106	71.09	-2.18	0.45	0.964259
2538	2R_DroMel_CAF1	9,031,068 – 9,031,174	- - - - - - - - -	4178	9,031,068 – 9,031,174	-	6	106	71.09	-2.00	0.35	0.733163
2539	2R_DroMel_CAF1	9,033,159 – 9,033,269	- - - - - - - - -	4179	9,033,159 – 9,033,269	+	4	110	89.09	-5.69	0.96	0.979941
2539	2R_DroMel_CAF1	9,033,159 – 9,033,269	- - - - - - - - -	4180	9,033,159 – 9,033,269	-	4	110	89.09	-3.80	0.83	0.991360
2540	2R_DroMel_CAF1	9,033,450 – 9,033,541	- - - - - - - - -	4181	9,033,450 – 9,033,541	+	6	120	63.14	-1.60	0.42	0.710134
2540	2R_DroMel_CAF1	9,033,450 – 9,033,541	- - - - - - - - -	4182	9,033,450 – 9,033,541	-	6	120	63.14	-2.01	0.37	0.895392
2541	2R_DroMel_CAF1	9,034,293 – 9,034,389	- - - "knownCDS=Parent=FBtr0091492;Name=CG33528-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33528-RD" - - - - -	4183	9,034,293 – 9,034,389	+	6	108	84.67	-1.94	0.75	0.565013
2542	2R_DroMel_CAF1	9,040,389 – 9,040,483	- - - - - - - - -	4184	9,040,389 – 9,040,483	-	6	95	81.29	-1.49	0.63	0.500000
2543	2R_DroMel_CAF1	9,047,919 – 9,048,031	- - - - - - - - -	4185	9,047,919 – 9,048,031	-	5	113	91.62	-1.81	0.85	0.959146
2544	2R_DroMel_CAF1	9,058,857 – 9,058,957	- - - - - - - - -	4186	9,058,857 – 9,058,957	+	6	115	78.75	-2.28	0.61	0.935740
2545	2R_DroMel_CAF1	9,060,508 – 9,060,613	- - - - - - - - -	4187	9,060,508 – 9,060,613	-	4	120	75.63	-2.08	0.69	0.979532
2546	2R_DroMel_CAF1	9,061,007 – 9,061,180	- - - - - - - - -	4188	9,061,007 – 9,061,113	-	5	107	78.22	-2.10	0.39	0.775864
2546	2R_DroMel_CAF1	9,061,007 – 9,061,180	- - - - - - - - -	4189	9,061,074 – 9,061,180	-	6	112	81.77	-1.44	0.68	0.538382
2547	2R_DroMel_CAF1	9,061,806 – 9,061,923	- - - - - - - - -	4190	9,061,806 – 9,061,923	+	5	117	93.16	-1.79	0.88	0.979479
2547	2R_DroMel_CAF1	9,061,806 – 9,061,923	- - - - - - - - -	4191	9,061,806 – 9,061,923	-	5	117	93.16	-1.37	0.88	0.805163
2548	2R_DroMel_CAF1	9,065,935 – 9,066,052	- - - "knownCDS=Parent=FBtr0087684;Name=CG33156-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33156-RB" - - - - -	4192	9,065,935 – 9,066,052	-	6	117	82.68	-1.75	0.66	0.555723
2549	2R_DroMel_CAF1	9,068,283 – 9,068,423	- - - - - - - - -	4193	9,068,283 – 9,068,402	+	5	120	87.74	-1.49	0.75	0.500000
2549	2R_DroMel_CAF1	9,068,283 – 9,068,423	- - - - - - - - -	4194	9,068,323 – 9,068,423	+	5	101	86.91	-3.02	0.80	0.996798
2550	2R_DroMel_CAF1	9,068,552 – 9,068,643	- - - - - - - - -	4195	9,068,552 – 9,068,643	+	4	91	94.87	-2.80	0.93	0.988326
2551	2R_DroMel_CAF1	9,070,468 – 9,070,588	- - - "knownCDS=Parent=FBtr0087675;Name=Roe1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6155-RA" - - - "ncRNAdb=MmuscAK039174_unclassifiable\|6e-09" -	4196	9,070,468 – 9,070,588	+	5	120	97.08	-1.15	0.98	0.708683
2551	2R_DroMel_CAF1	9,070,468 – 9,070,588		4197	9,070,468 – 9,070,588	-	5	120	97.08	-1.76	0.99	0.995746
2552	2R_DroMel_CAF1	9,070,963 – 9,071,083	- - - "knownCDS=Parent=FBtr0087675;Name=Roe1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6155-RA" - - - - -	4198	9,070,963 – 9,071,083	+	5	120	97.67	-1.47	0.90	0.821511
2553	2R_DroMel_CAF1	9,071,355 – 9,071,515	- - - - - - - - -	4199	9,071,355 – 9,071,475	-	5	120	96.67	-1.51	0.93	0.942519
2553	2R_DroMel_CAF1	9,071,355 – 9,071,515	- - - - - - - - -	4200	9,071,395 – 9,071,515	+	5	120	97.50	-1.27	0.99	0.840762
2554	2R_DroMel_CAF1	9,071,913 – 9,072,033	- - - "knownCDS=Parent=FBtr0087676;Name=CG13333-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13333-RA" - - - - -	4201	9,071,913 – 9,072,033	-	5	120	95.67	-1.25	0.92	0.780902
2555	2R_DroMel_CAF1	9,072,741 – 9,073,021	- - "RNAmicro=f:9072901_t:9073020_strand:+_p:0.617190" "knownCDS=Parent=FBtr0087676;Name=CG13333-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13333-RA" - - - - -	4202	9,072,741 – 9,072,861	-	5	120	94.25	-1.05	0.95	0.557495
				4203	9,072,781 – 9,072,901	+	5	120	94.75	-1.78	0.86	0.959970
				4204	9,072,781 – 9,072,901	-	5	120	94.75	-1.33	0.88	0.733070
				4205	9,072,901 – 9,073,021	+	5	120	93.83	-1.60	0.87	0.938517
				4206	9,072,901 – 9,073,021	-	5	120	93.83	-2.13	0.91	0.998794
2556	2R_DroMel_CAF1	9,073,628 – 9,073,780	- - - - - - - - -	4207	9,073,628 – 9,073,748	-	5	120	91.00	-2.63	0.84	0.997762
				4208	9,073,668 – 9,073,780	+	5	120	85.08	-1.47	0.80	0.507204
				4209	9,073,668 – 9,073,780	-	5	120	85.08	-1.79	0.79	0.777158
2557	2R_DroMel_CAF1	9,073,820 – 9,074,020	- - - - - - - - -	4210	9,073,820 – 9,073,940	-	5	120	92.67	-2.08	0.90	0.998014
				4211	9,073,860 – 9,073,980	-	5	120	91.83	-1.61	0.81	0.804148
				4212	9,073,900 – 9,074,020	-	5	120	88.42	-1.93	0.86	0.962464
2558	2R_DroMel_CAF1	9,075,380 – 9,075,493	- - - "knownCDS=Parent=FBtr0087677;Name=CG13334-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13334-RA" - - - - -	4213	9,075,380 – 9,075,493	-	5	113	91.15	-1.40	0.86	0.745787
2559	2R_DroMel_CAF1	9,075,810 – 9,075,920	- - - - - - - - -	4214	9,075,810 – 9,075,920	+	5	120	87.47	-1.69	0.70	0.523636
2560	2R_DroMel_CAF1	9,077,079 – 9,077,190	- - - - - - - - -	4215	9,077,079 – 9,077,190	+	3	120	83.47	-1.98	0.72	0.718196
2560	2R_DroMel_CAF1	9,077,079 – 9,077,190	- - - - - - - - -	4216	9,077,079 – 9,077,190	-	3	120	83.47	-1.80	0.71	0.585462
2561	2R_DroMel_CAF1	9,077,291 – 9,077,405	- - - - - - - - -	4217	9,077,291 – 9,077,382	+	5	120	76.65	-1.50	0.74	0.837380
				4218	9,077,291 – 9,077,382	-	5	120	76.65	-2.78	0.65	0.998241
				4219	9,077,310 – 9,077,405	+	4	95	94.39	-1.65	0.90	0.756202
				4220	9,077,310 – 9,077,405	-	4	95	94.39	-1.70	1.00	0.904599
2562	2R_DroMel_CAF1	9,077,935 – 9,078,055	- - - - - - - - -	4221	9,077,935 – 9,078,055	-	5	120	82.39	-1.94	0.65	0.724618
2563	2R_DroMel_CAF1	9,078,678 – 9,078,793	- - - - - - - - -	4222	9,078,678 – 9,078,793	+	4	120	84.26	-3.26	0.72	0.993414
2564	2R_DroMel_CAF1	9,080,469 – 9,080,633	- - - - - - - - -	4223	9,080,469 – 9,080,562	-	5	112	77.11	-1.52	0.64	0.537594
				4224	9,080,490 – 9,080,599	-	5	109	96.65	-1.31	1.00	0.928329
				4225	9,080,530 – 9,080,633	+	5	109	90.72	-2.05	0.84	0.979348
				4226	9,080,530 – 9,080,633	-	5	109	90.72	-1.93	0.94	0.997002
2565	2R_DroMel_CAF1	9,081,724 – 9,081,821	- - - - - - - - -	4227	9,081,724 – 9,081,821	+	4	97	86.90	-1.36	0.84	0.512747
2566	2R_DroMel_CAF1	9,081,901 – 9,082,039	- - - - - - - - -	4228	9,081,901 – 9,082,000	+	4	106	85.74	-1.83	0.74	0.777360
				4229	9,081,941 – 9,082,039	+	4	105	87.17	-2.03	0.74	0.837623
				4230	9,081,941 – 9,082,039	-	4	105	87.17	-2.44	0.68	0.856204
2567	2R_DroMel_CAF1	9,082,642 – 9,082,802	- - - - - - - - -	4231	9,082,642 – 9,082,762	-	5	120	92.75	-1.42	0.79	0.515489
2567	2R_DroMel_CAF1	9,082,642 – 9,082,802	- - - - - - - - -	4232	9,082,682 – 9,082,802	-	5	120	92.25	-2.49	0.82	0.993672
2568	2R_DroMel_CAF1	9,082,874 – 9,082,966	- - - - - - - - -	4233	9,082,874 – 9,082,966	+	4	113	81.13	-2.17	0.58	0.746237
2569	2R_DroMel_CAF1	9,083,165 – 9,083,285	- - - - - - - - -	4234	9,083,165 – 9,083,285	+	5	120	94.66	-2.72	0.75	0.866557
2569	2R_DroMel_CAF1	9,083,165 – 9,083,285	- - - - - - - - -	4235	9,083,165 – 9,083,285	-	5	120	94.66	-3.04	0.86	0.999386
2570	2R_DroMel_CAF1	9,083,325 – 9,083,443	- - - - - - - - -	4236	9,083,325 – 9,083,443	-	5	120	93.76	-1.70	0.91	0.986860
2571	2R_DroMel_CAF1	9,084,024 – 9,084,143	- - - - - - - - -	4237	9,084,024 – 9,084,143	+	5	120	77.72	-1.91	0.55	0.762307
2571	2R_DroMel_CAF1	9,084,024 – 9,084,143	- - - - - - - - -	4238	9,084,024 – 9,084,143	-	5	120	77.72	-2.13	0.46	0.858224
2572	2R_DroMel_CAF1	9,084,920 – 9,085,055	- - - - - - - - -	4239	9,084,920 – 9,085,024	+	3	114	85.15	-2.79	0.70	0.899459
				4240	9,084,920 – 9,085,024	-	3	114	85.15	-3.80	0.73	0.976189
				4241	9,084,950 – 9,085,055	+	3	105	92.04	-3.19	0.75	0.772176
				4242	9,084,950 – 9,085,055	-	3	105	92.04	-2.65	0.76	0.660777
2573	2R_DroMel_CAF1	9,085,490 – 9,085,689	- - - - - - - - -	4243	9,085,490 – 9,085,610	+	4	120	93.47	-1.83	0.90	0.880843
				4244	9,085,490 – 9,085,610	-	4	120	93.47	-3.41	0.85	0.974277
				4245	9,085,530 – 9,085,649	+	4	120	95.40	-2.11	0.86	0.844382
				4246	9,085,530 – 9,085,649	-	4	120	95.40	-3.49	0.90	0.975822
				4247	9,085,570 – 9,085,689	-	4	120	93.17	-1.66	0.82	0.602073
2574	2R_DroMel_CAF1	9,085,803 – 9,085,949	- - - - - - - - -	4248	9,085,803 – 9,085,909	-	4	117	89.02	-2.10	0.86	0.942293
2574	2R_DroMel_CAF1	9,085,803 – 9,085,949	- - - - - - - - -	4249	9,085,829 – 9,085,949	-	4	120	88.61	-1.72	0.75	0.697060
2575	2R_DroMel_CAF1	9,086,057 – 9,086,177	- - - - - - - - -	4250	9,086,057 – 9,086,177	+	4	120	91.67	-2.98	0.81	0.959263
2576	2R_DroMel_CAF1	9,086,742 – 9,086,862	- - - - - - - - -	4251	9,086,742 – 9,086,862	-	4	120	94.96	-1.54	0.88	0.574649
2577	2R_DroMel_CAF1	9,092,705 – 9,092,840	- - - - - - - - -	4252	9,092,705 – 9,092,821	+	6	120	83.25	-3.82	0.99	0.997529
				4253	9,092,705 – 9,092,821	-	6	120	83.25	-3.21	0.92	0.991102
				4254	9,092,744 – 9,092,840	+	6	107	80.78	-2.02	0.86	0.919975
				4255	9,092,744 – 9,092,840	-	6	107	80.78	-2.79	0.75	0.945930
2578	2R_DroMel_CAF1	9,095,800 – 9,095,891	- - - - - - - - -	4256	9,095,800 – 9,095,891	+	6	96	78.08	-2.05	0.46	0.548355
2579	2R_DroMel_CAF1	9,097,358 – 9,097,454	- - - - - - - - -	4257	9,097,358 – 9,097,454	+	6	102	70.82	-1.11	0.69	0.841008
2580	2R_DroMel_CAF1	9,100,616 – 9,100,710	- - - - - - - - -	4258	9,100,616 – 9,100,710	-	5	94	69.93	-1.72	0.16	0.539912
2581	2R_DroMel_CAF1	9,114,928 – 9,115,068	- - - - - - - - -	4259	9,114,928 – 9,115,032	+	6	114	78.35	-2.60	0.42	0.842820
2581	2R_DroMel_CAF1	9,114,928 – 9,115,068	- - - - - - - - -	4260	9,114,962 – 9,115,068	+	6	117	80.54	-2.71	0.58	0.910355
2582	2R_DroMel_CAF1	9,116,167 – 9,116,262	- - - - - - - - -	4261	9,116,167 – 9,116,262	+	5	107	75.72	-1.80	0.26	0.719569
2583	2R_DroMel_CAF1	9,122,265 – 9,122,360	- - - - - - - - -	4262	9,122,265 – 9,122,360	-	6	98	79.21	-2.91	0.48	0.943265
2584	2R_DroMel_CAF1	9,122,376 – 9,122,468	- - - - - - - - -	4263	9,122,376 – 9,122,468	+	5	99	77.68	-1.49	0.07	0.609239
2585	2R_DroMel_CAF1	9,128,102 – 9,128,194	- - - - - - - - -	4264	9,128,102 – 9,128,194	+	6	117	82.37	-1.91	0.61	0.512417
2586	2R_DroMel_CAF1	9,130,844 – 9,130,935	- - - - - - - - -	4265	9,130,844 – 9,130,935	-	6	120	79.52	-1.65	0.57	0.500000
2587	2R_DroMel_CAF1	9,131,741 – 9,131,851	- - - - - - - - -	4266	9,131,741 – 9,131,851	-	6	120	81.48	-1.88	0.71	0.780410
2588	2R_DroMel_CAF1	9,131,883 – 9,132,003	- - - - - - - - -	4267	9,131,883 – 9,132,003	+	6	120	96.49	-1.83	0.93	0.994448
2589	2R_DroMel_CAF1	9,135,389 – 9,135,492	- - - - - - - - -	4268	9,135,389 – 9,135,492	-	6	119	81.05	-1.56	0.81	0.772109
2590	2R_DroMel_CAF1	9,137,876 – 9,137,974	- - - - - - - - -	4269	9,137,876 – 9,137,974	-	4	98	82.99	-1.76	0.65	0.632935
2591	2R_DroMel_CAF1	9,151,443 – 9,151,546	- - - - - - - - -	4270	9,151,443 – 9,151,546	-	5	104	79.35	-1.60	0.81	0.820909
2592	2R_DroMel_CAF1	9,153,277 – 9,153,369	- - - - - - - - -	4271	9,153,277 – 9,153,369	+	4	109	77.25	-2.00	0.80	0.976080
2593	2R_DroMel_CAF1	9,154,756 – 9,154,847	- - - - - - - - -	4272	9,154,756 – 9,154,847	+	4	91	84.10	-2.08	0.65	0.783839
2593	2R_DroMel_CAF1	9,154,756 – 9,154,847	- - - - - - - - -	4273	9,154,756 – 9,154,847	-	4	91	84.10	-2.32	0.68	0.912855
2594	2R_DroMel_CAF1	9,155,188 – 9,155,278	- - - - - - - - -	4274	9,155,188 – 9,155,278	+	5	104	80.92	-2.01	0.76	0.916863
2595	2R_DroMel_CAF1	9,157,974 – 9,158,070	- - - - - - - - -	4275	9,157,974 – 9,158,070	+	4	109	78.84	-3.65	0.68	0.999819
2595	2R_DroMel_CAF1	9,157,974 – 9,158,070	- - - - - - - - -	4276	9,157,974 – 9,158,070	-	4	109	78.84	-3.29	0.70	0.999657
2596	2R_DroMel_CAF1	9,165,323 – 9,165,413	- - - - - - - - -	4277	9,165,323 – 9,165,413	+	6	115	81.63	-3.57	0.84	0.970243
2596	2R_DroMel_CAF1	9,165,323 – 9,165,413	- - - - - - - - -	4278	9,165,323 – 9,165,413	-	6	115	81.63	-2.20	0.69	0.835279
2597	2R_DroMel_CAF1	9,168,227 – 9,168,333	- - - - - - - - -	4279	9,168,227 – 9,168,333	+	5	106	94.72	-2.40	0.98	0.999941
2598	2R_DroMel_CAF1	9,171,585 – 9,171,698	- - - - - - - - -	4280	9,171,585 – 9,171,678	+	5	103	81.41	-3.29	0.78	0.998448
				4281	9,171,607 – 9,171,698	+	6	114	82.62	-3.12	0.74	0.916058
				4282	9,171,607 – 9,171,698	-	6	114	82.62	-2.15	0.68	0.716654
2599	2R_DroMel_CAF1	9,173,144 – 9,173,238	- - - - - - - - -	4283	9,173,144 – 9,173,238	-	6	106	81.77	-2.05	0.58	0.568785
2600	2R_DroMel_CAF1	9,173,906 – 9,174,005	- - - - - - - - -	4284	9,173,906 – 9,174,005	+	6	108	79.66	-1.16	0.73	0.603434
2601	2R_DroMel_CAF1	9,178,631 – 9,178,773	- - - "knownCDS=Parent=FBtr0087651;Name=CG6209-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6209-RA" - - - - -	4285	9,178,631 – 9,178,738	-	6	120	78.68	-2.10	0.56	0.843277
2601	2R_DroMel_CAF1	9,178,631 – 9,178,773		4286	9,178,658 – 9,178,773	-	6	120	80.11	-1.91	0.60	0.721730
2602	2R_DroMel_CAF1	9,179,505 – 9,179,654	- - - - - - - - -	4287	9,179,505 – 9,179,614	+	5	120	78.20	-2.14	0.44	0.823656
				4288	9,179,505 – 9,179,614	-	5	120	78.20	-1.74	0.55	0.528288
				4289	9,179,543 – 9,179,654	+	5	120	78.83	-1.97	0.43	0.577568
2603	2R_DroMel_CAF1	9,180,113 – 9,180,207	- - - - - - - - -	4290	9,180,113 – 9,180,207	+	6	113	76.92	-1.44	0.60	0.571886
2604	2R_DroMel_CAF1	9,180,368 – 9,180,473	- - - - - - - - -	4291	9,180,368 – 9,180,473	-	6	108	83.85	-2.36	0.69	0.648664
2605	2R_DroMel_CAF1	9,183,623 – 9,183,741	- - - - - - - - -	4292	9,183,623 – 9,183,741	-	5	120	92.00	-1.41	0.86	0.789984
2606	2R_DroMel_CAF1	9,185,624 – 9,185,744	- - - "knownCDS=Parent=FBtr0087627;Name=CG18368-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18368-RA" - - - - -	4293	9,185,624 – 9,185,744	+	4	120	87.36	-2.23	0.89	0.973663
2606	2R_DroMel_CAF1	9,185,624 – 9,185,744		4294	9,185,624 – 9,185,744	-	4	120	87.36	-1.64	0.73	0.650535
2607	2R_DroMel_CAF1	9,187,065 – 9,187,220	- - "RNAmicro=f:9187101_t:9187219_strand:+_p:0.999439" "knownCDS=Parent=FBtr0087627;Name=CG18368-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18368-RA" - - - - -	4295	9,187,065 – 9,187,180	+	6	115	79.71	-1.62	0.65	0.733118
				4296	9,187,101 – 9,187,220	+	6	119	74.48	-4.54	0.64	0.993353
				4297	9,187,101 – 9,187,220	-	6	119	74.48	-3.45	0.62	0.997542
2608	2R_DroMel_CAF1	9,189,538 – 9,189,635	- - - - - - - - -	4298	9,189,538 – 9,189,635	+	6	105	81.62	-1.66	0.78	0.756570
2608	2R_DroMel_CAF1	9,189,538 – 9,189,635	- - - - - - - - -	4299	9,189,538 – 9,189,635	-	6	105	81.62	-1.54	0.85	0.748081
2609	2R_DroMel_CAF1	9,192,111 – 9,192,202	- - - - - - - - -	4300	9,192,111 – 9,192,202	-	6	96	83.27	-1.56	0.78	0.592605
2610	2R_DroMel_CAF1	9,192,487 – 9,192,577	- - - - - - - - -	4301	9,192,487 – 9,192,577	+	6	103	78.54	-1.73	0.54	0.522828
2611	2R_DroMel_CAF1	9,196,264 – 9,196,397	- - - - - - - - -	4302	9,196,264 – 9,196,360	+	6	112	81.43	-2.31	0.58	0.735243
				4303	9,196,285 – 9,196,397	+	5	116	92.52	-3.61	0.82	0.999260
				4304	9,196,285 – 9,196,397	-	5	116	92.52	-4.09	0.84	0.999703
2612	2R_DroMel_CAF1	9,203,873 – 9,204,008	- - - - - - - - -	4305	9,203,873 – 9,203,975	+	6	113	80.23	-1.58	0.60	0.517079
2612	2R_DroMel_CAF1	9,203,873 – 9,204,008	- - - - - - - - -	4306	9,203,913 – 9,204,008	+	6	117	76.33	-2.37	0.58	0.976527
2613	2R_DroMel_CAF1	9,212,147 – 9,212,260	- - - - - - - - -	4307	9,212,147 – 9,212,240	+	6	93	92.75	-1.64	0.88	0.869390
2613	2R_DroMel_CAF1	9,212,147 – 9,212,260	- - - - - - - - -	4308	9,212,167 – 9,212,260	+	6	93	92.47	-1.59	0.84	0.517881
2614	2R_DroMel_CAF1	9,212,731 – 9,212,823	- - - - - - - - -	4309	9,212,731 – 9,212,823	+	5	107	85.33	-1.73	0.77	0.715951
2615	2R_DroMel_CAF1	9,213,523 – 9,213,666	- - - - - - - - -	4310	9,213,523 – 9,213,631	+	6	110	85.40	-2.50	0.72	0.560936
				4311	9,213,523 – 9,213,631	-	6	110	85.40	-2.60	0.72	0.590114
				4312	9,213,559 – 9,213,666	+	5	107	95.51	-1.63	0.83	0.770973
				4313	9,213,559 – 9,213,666	-	5	107	95.51	-2.05	0.89	0.995028
2616	2R_DroMel_CAF1	9,224,333 – 9,224,488	- - - - - - - - -	4314	9,224,333 – 9,224,438	+	4	105	91.51	-1.75	0.80	0.699606
				4315	9,224,333 – 9,224,438	-	4	105	91.51	-2.08	0.76	0.739949
				4316	9,224,361 – 9,224,464	+	4	117	78.08	-3.26	0.58	0.998682
				4317	9,224,361 – 9,224,464	-	4	117	78.08	-2.90	0.49	0.948162
				4318	9,224,398 – 9,224,488	+	5	104	79.34	-2.19	0.52	0.857425
				4319	9,224,398 – 9,224,488	-	5	104	79.34	-2.44	0.53	0.953083
2617	2R_DroMel_CAF1	9,226,348 – 9,226,448	- - - - - - - - -	4320	9,226,348 – 9,226,448	+	6	117	71.81	-1.54	0.52	0.620887
2618	2R_DroMel_CAF1	9,229,951 – 9,230,050	- - - - - - - - -	4321	9,229,951 – 9,230,050	+	6	104	79.72	-1.71	0.62	0.706001
2618	2R_DroMel_CAF1	9,229,951 – 9,230,050	- - - - - - - - -	4322	9,229,951 – 9,230,050	-	6	104	79.72	-2.08	0.62	0.854399
2619	2R_DroMel_CAF1	9,235,572 – 9,235,663	- - - - - - - - -	4323	9,235,572 – 9,235,663	-	6	97	84.23	-3.04	0.63	0.641488
2620	2R_DroMel_CAF1	9,241,491 – 9,241,599	- - - "knownCDS=Parent=FBtr0087625;Name=fas-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17716-RA" - - - - -	4324	9,241,491 – 9,241,599	-	6	116	78.13	-1.46	0.68	0.784678
2621	2R_DroMel_CAF1	9,243,385 – 9,243,482	- - - - - - - - -	4325	9,243,385 – 9,243,482	+	6	115	76.69	-1.69	0.74	0.945433
2621	2R_DroMel_CAF1	9,243,385 – 9,243,482	- - - - - - - - -	4326	9,243,385 – 9,243,482	-	6	115	76.69	-1.45	0.65	0.778023
2622	2R_DroMel_CAF1	9,255,047 – 9,255,151	- - - - - - - - -	4327	9,255,047 – 9,255,151	-	5	106	89.74	-1.74	0.72	0.536752
2623	2R_DroMel_CAF1	9,265,213 – 9,265,304	- - - - - - - - -	4328	9,265,213 – 9,265,304	-	5	97	94.65	-1.10	0.92	0.546534
2624	2R_DroMel_CAF1	9,272,855 – 9,272,998	- - - "knownCDS=Parent=FBtr0087628;Name=CG6280-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6280-RA" - - - - -	4329	9,272,855 – 9,272,964	-	6	109	84.77	-2.45	0.81	0.868319
2624	2R_DroMel_CAF1	9,272,855 – 9,272,998		4330	9,272,890 – 9,272,998	-	6	108	87.16	-1.64	0.85	0.601489
2625	2R_DroMel_CAF1	9,274,291 – 9,274,393	- - "RNAmicro=f:9274291_t:9274392_strand:+_p:0.814503" "knownCDS=Parent=FBtr0087628;Name=CG6280-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6280-RA" - - - - -	4331	9,274,291 – 9,274,393	+	6	102	90.52	-2.70	0.84	0.961241
2626	2R_DroMel_CAF1	9,276,730 – 9,276,862	- - - - - - - - -	4332	9,276,730 – 9,276,825	-	6	108	78.99	-2.16	0.46	0.532566
2626	2R_DroMel_CAF1	9,276,730 – 9,276,862	- - - - - - - - -	4333	9,276,767 – 9,276,862	-	6	108	83.68	-1.72	0.73	0.559052
2627	2R_DroMel_CAF1	9,280,133 – 9,280,236	- - - - - - - - -	4334	9,280,133 – 9,280,236	-	6	107	71.94	-3.25	0.45	0.999061
2628	2R_DroMel_CAF1	9,285,217 – 9,285,318	- - - - - - - - -	4335	9,285,217 – 9,285,318	+	6	111	82.57	-3.29	0.55	0.837050
2629	2R_DroMel_CAF1	9,285,778 – 9,285,874	- - - - - - - - -	4336	9,285,778 – 9,285,874	+	6	119	77.75	-1.52	0.75	0.895572
2630	2R_DroMel_CAF1	9,291,428 – 9,291,521	- - - "knownCDS=Parent=FBtr0087629;Name=CG13338-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13338-RA" - - - - -	4337	9,291,428 – 9,291,521	-	6	93	91.18	-2.04	0.82	0.629018
2631	2R_DroMel_CAF1	9,292,171 – 9,292,282	- - - "knownCDS=Parent=FBtr0087629;Name=CG13338-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13338-RA" - - - - -	4338	9,292,171 – 9,292,282	+	6	111	82.64	-1.97	0.72	0.725287
2632	2R_DroMel_CAF1	9,292,862 – 9,292,966	- - - - - - - - -	4339	9,292,862 – 9,292,966	+	5	108	78.14	-2.05	0.44	0.750027
2633	2R_DroMel_CAF1	9,302,525 – 9,302,654	- - - - - - - - -	4340	9,302,525 – 9,302,617	-	6	100	76.53	-2.74	0.40	0.955973
2633	2R_DroMel_CAF1	9,302,525 – 9,302,654	- - - - - - - - -	4341	9,302,542 – 9,302,654	-	6	112	78.25	-1.98	0.68	0.938032
2634	2R_DroMel_CAF1	9,303,048 – 9,303,164	- - - - - - - - -	4342	9,303,048 – 9,303,164	+	6	120	67.55	-1.25	0.56	0.573456
2635	2R_DroMel_CAF1	9,314,902 – 9,315,009	- - - - - - - - -	4343	9,314,902 – 9,315,009	-	5	110	78.58	-2.34	0.50	0.938755
2636	2R_DroMel_CAF1	9,315,515 – 9,315,613	- - - - - - - - -	4344	9,315,515 – 9,315,613	+	4	101	86.97	-1.79	0.78	0.778801
2637	2R_DroMel_CAF1	9,320,949 – 9,321,047	- - - "knownCDS=Parent=FBtr0087630;Name=CG6305-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6305-RA" - - - - -	4345	9,320,949 – 9,321,047	-	3	98	70.79	-1.16	0.69	0.693297
2638	2R_DroMel_CAF1	9,321,944 – 9,322,082	- - - - - - - - -	4346	9,321,944 – 9,322,042	-	6	106	73.91	-1.62	0.69	0.953436
2638	2R_DroMel_CAF1	9,321,944 – 9,322,082	- - - - - - - - -	4347	9,321,984 – 9,322,082	+	6	98	73.19	-2.17	0.29	0.551055
2639	2R_DroMel_CAF1	9,327,410 – 9,327,514	- - - - - - - - -	4348	9,327,410 – 9,327,514	+	6	118	81.74	-1.94	0.67	0.734694
2640	2R_DroMel_CAF1	9,328,331 – 9,328,433	- - - - - - - - -	4349	9,328,331 – 9,328,433	+	6	111	86.05	-1.53	0.85	0.554671
2641	2R_DroMel_CAF1	9,329,875 – 9,330,048	- - - - - - - - -	4350	9,329,875 – 9,329,973	-	6	112	77.99	-2.27	0.60	0.948841
2641	2R_DroMel_CAF1	9,329,875 – 9,330,048	- - - - - - - - -	4351	9,329,951 – 9,330,048	+	6	111	81.65	-1.41	0.77	0.637756
2642	2R_DroMel_CAF1	9,331,126 – 9,331,223	- - - - - - - - -	4352	9,331,126 – 9,331,223	-	5	111	81.17	-2.16	0.67	0.906755
2643	2R_DroMel_CAF1	9,332,087 – 9,332,200	- - - "knownCDS=Parent=FBtr0087631;Name=CG12295-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12295-RB" - - - - -	4353	9,332,087 – 9,332,200	+	6	116	77.41	-1.89	0.68	0.939871
2644	2R_DroMel_CAF1	9,332,438 – 9,332,539	- - - - - - - - -	4354	9,332,438 – 9,332,539	+	6	105	82.33	-1.68	0.73	0.662484
2645	2R_DroMel_CAF1	9,333,022 – 9,333,173	- - - "knownCDS=Parent=FBtr0087631;Name=CG12295-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12295-RB" - - - - -	4355	9,333,022 – 9,333,139	-	6	120	71.37	-2.17	0.39	0.919625
2645	2R_DroMel_CAF1	9,333,022 – 9,333,173		4356	9,333,062 – 9,333,173	-	6	117	86.02	-2.26	0.77	0.619901
2646	2R_DroMel_CAF1	9,340,259 – 9,340,366	- - - - - - - - -	4357	9,340,259 – 9,340,366	-	6	119	80.72	-1.58	0.63	0.567429
2647	2R_DroMel_CAF1	9,344,293 – 9,344,383	- - - - - - - - -	4358	9,344,293 – 9,344,383	+	6	109	73.41	-1.97	0.44	0.797238
2648	2R_DroMel_CAF1	9,344,863 – 9,344,976	- - - - - - - - -	4359	9,344,863 – 9,344,976	+	5	115	92.78	-2.16	0.88	0.997521
2648	2R_DroMel_CAF1	9,344,863 – 9,344,976	- - - - - - - - -	4360	9,344,863 – 9,344,976	-	5	115	92.78	-1.66	0.82	0.841322
2649	2R_DroMel_CAF1	9,346,105 – 9,346,209	- - - - - - - - -	4361	9,346,105 – 9,346,209	-	4	106	80.00	-2.07	0.66	0.891673
2650	2R_DroMel_CAF1	9,348,005 – 9,348,113	- - - - - - - - -	4362	9,348,005 – 9,348,113	+	5	108	93.69	-2.12	0.92	0.999027
2651	2R_DroMel_CAF1	9,349,939 – 9,350,054	- - - "knownCDS=Parent=FBtr0087646;Name=CG6337-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6337-RA" - - - - -	4363	9,349,939 – 9,350,054	-	6	115	77.89	-2.01	0.47	0.546869
2652	2R_DroMel_CAF1	9,351,016 – 9,351,115	- - - - - - - - -	4364	9,351,016 – 9,351,115	+	6	109	87.79	-1.52	0.88	0.661510
2653	2R_DroMel_CAF1	9,354,132 – 9,354,230	- - - - - - - - -	4365	9,354,132 – 9,354,230	+	5	111	79.96	-2.15	0.78	0.963473
2654	2R_DroMel_CAF1	9,367,008 – 9,367,116	- - - "knownCDS=Parent=FBtr0087640;Name=CG30485-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30485-RA" - - - - -	4366	9,367,008 – 9,367,116	-	6	114	79.21	-1.33	0.63	0.500000
2655	2R_DroMel_CAF1	9,371,882 – 9,371,978	- - - - - - - - -	4367	9,371,882 – 9,371,978	+	5	120	67.34	-1.89	0.34	0.678796
2656	2R_DroMel_CAF1	9,377,441 – 9,377,534	- - - - - - - - -	4368	9,377,441 – 9,377,534	+	5	97	71.63	-1.54	0.63	0.824100
2656	2R_DroMel_CAF1	9,377,441 – 9,377,534	- - - - - - - - -	4369	9,377,441 – 9,377,534	-	5	97	71.63	-2.06	0.51	0.962712
2657	2R_DroMel_CAF1	9,382,804 – 9,382,902	- - - "knownCDS=Parent=FBtr0087616, FBtr0087617, FBtr0087619;Name=shot-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18076-RB, FlyBase+Annotation+IDs:CG18076-RG, FlyBase+Annotation+IDs:CG18076-RA" - - - - -	4370	9,382,804 – 9,382,902	+	6	106	83.37	-1.57	0.73	0.524091
2658	2R_DroMel_CAF1	9,384,029 – 9,384,132	- - - - - - - - -	4371	9,384,029 – 9,384,132	+	6	106	80.20	-2.26	0.83	0.943319
2658	2R_DroMel_CAF1	9,384,029 – 9,384,132	- - - - - - - - -	4372	9,384,029 – 9,384,132	-	6	106	80.20	-2.45	0.84	0.954666
2659	2R_DroMel_CAF1	9,386,730 – 9,386,847	- - - "knownCDS=Parent=FBtr0087618, FBtr0087620, FBtr0087621;Name=shot-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18076-RE, FlyBase+Annotation+IDs:CG18076-RC, FlyBase+Annotation+IDs:CG18076-RH" - - - - -	4373	9,386,730 – 9,386,830	-	6	111	77.80	-1.48	0.71	0.862024
2659	2R_DroMel_CAF1	9,386,730 – 9,386,847		4374	9,386,755 – 9,386,847	-	6	93	84.34	-2.06	0.70	0.526759
2660	2R_DroMel_CAF1	9,389,996 – 9,390,242	- - - - - - - - -	4375	9,389,996 – 9,390,097	-	6	113	77.12	-0.79	0.76	0.521152
				4376	9,390,097 – 9,390,202	+	6	114	73.82	-0.87	0.69	0.512257
				4377	9,390,126 – 9,390,242	+	6	120	81.12	-1.62	0.72	0.741573
				4378	9,390,126 – 9,390,242	-	6	120	81.12	-1.14	0.73	0.500000
2661	2R_DroMel_CAF1	9,396,225 – 9,396,345	- - - "knownCDS=Parent=FBtr0087616, FBtr0087617, FBtr0087619;Name=shot-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18076-RB, FlyBase+Annotation+IDs:CG18076-RG, FlyBase+Annotation+IDs:CG18076-RA" - - - - -	4379	9,396,225 – 9,396,345	-	6	120	93.22	-1.65	0.87	0.829509
2662	2R_DroMel_CAF1	9,399,098 – 9,399,191	- - - - - - - - -	4380	9,399,098 – 9,399,191	-	4	93	88.33	-1.62	0.76	0.649378
2663	2R_DroMel_CAF1	9,400,100 – 9,400,220	- - - "knownCDS=Parent=FBtr0087621;Name=shot-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18076-RH" - - - - -	4381	9,400,100 – 9,400,220	-	6	120	77.06	-2.06	0.54	0.872503
2664	2R_DroMel_CAF1	9,403,477 – 9,403,637	- - - "knownCDS=Parent=FBtr0087621;Name=shot-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18076-RH" - - - - -	4382	9,403,477 – 9,403,597	-	6	120	87.11	-2.24	0.77	0.530727
2664	2R_DroMel_CAF1	9,403,477 – 9,403,637		4383	9,403,517 – 9,403,637	-	6	120	79.22	-1.50	0.60	0.506015
2665	2R_DroMel_CAF1	9,404,565 – 9,404,665	- - - "knownCDS=Parent=FBtr0087621;Name=shot-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18076-RH" - - - - -	4384	9,404,565 – 9,404,665	-	5	101	72.41	-2.17	0.17	0.968073
2666	2R_DroMel_CAF1	9,405,357 – 9,405,517	- - - "knownCDS=Parent=FBtr0087621;Name=shot-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18076-RH" - - - - -	4385	9,405,357 – 9,405,477	+	4	120	83.75	-2.19	0.67	0.872244
2666	2R_DroMel_CAF1	9,405,357 – 9,405,517		4386	9,405,397 – 9,405,517	+	4	120	88.19	-1.82	0.75	0.746921
2667	2R_DroMel_CAF1	9,409,026 – 9,409,130	- - - "knownCDS=Parent=FBtr0087621;Name=shot-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18076-RH" - - - - -	4387	9,409,026 – 9,409,130	-	6	104	83.40	-1.93	0.70	0.602509
2668	2R_DroMel_CAF1	9,411,041 – 9,411,171	- - - - - - - - -	4388	9,411,041 – 9,411,137	-	6	108	82.40	-1.89	0.75	0.759728
2668	2R_DroMel_CAF1	9,411,041 – 9,411,171	- - - - - - - - -	4389	9,411,075 – 9,411,171	-	6	117	78.32	-1.48	0.59	0.500000
2669	2R_DroMel_CAF1	9,414,086 – 9,414,196	- - - - - - - - -	4390	9,414,086 – 9,414,196	+	6	119	78.70	-1.57	0.65	0.764472
2669	2R_DroMel_CAF1	9,414,086 – 9,414,196	- - - - - - - - -	4391	9,414,086 – 9,414,196	-	6	119	78.70	-1.19	0.77	0.732548
2670	2R_DroMel_CAF1	9,420,000 – 9,420,108	- - - "knownCDS=Parent=FBtr0087616, FBtr0087617, FBtr0087619;Name=shot-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18076-RB, FlyBase+Annotation+IDs:CG18076-RG, FlyBase+Annotation+IDs:CG18076-RA" - - - - -	4392	9,420,000 – 9,420,108	+	6	120	81.01	-1.87	0.83	0.878635
2670	2R_DroMel_CAF1	9,420,000 – 9,420,108		4393	9,420,000 – 9,420,108	-	6	120	81.01	-1.22	0.81	0.593019
2671	2R_DroMel_CAF1	9,421,158 – 9,421,278	- - - "knownCDS=Parent=FBtr0087616, FBtr0087617, FBtr0087619;Name=shot-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18076-RB, FlyBase+Annotation+IDs:CG18076-RG, FlyBase+Annotation+IDs:CG18076-RA" - - - - -	4394	9,421,158 – 9,421,278	+	6	120	91.28	-1.91	0.83	0.607469
2672	2R_DroMel_CAF1	9,423,713 – 9,423,814	- - - "knownCDS=Parent=FBtr0087620, FBtr0087621;Name=shot-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18076-RC, FlyBase+Annotation+IDs:CG18076-RH" - - - - -	4395	9,423,713 – 9,423,814	+	6	113	68.88	-1.89	0.33	0.609045
2673	2R_DroMel_CAF1	9,429,375 – 9,429,473	- - - - - - - - -	4396	9,429,375 – 9,429,473	+	4	105	77.45	-1.66	0.63	0.545111
2674	2R_DroMel_CAF1	9,433,462 – 9,433,553	- - - - - - - - -	4397	9,433,462 – 9,433,553	+	6	98	81.52	-1.88	0.62	0.646245
2674	2R_DroMel_CAF1	9,433,462 – 9,433,553	- - - - - - - - -	4398	9,433,462 – 9,433,553	-	6	98	81.52	-2.40	0.70	0.877359
2675	2R_DroMel_CAF1	9,441,642 – 9,441,762	- - - - - - - - -	4399	9,441,642 – 9,441,762	+	5	120	84.17	-2.98	0.74	0.991601
2675	2R_DroMel_CAF1	9,441,642 – 9,441,762	- - - - - - - - -	4400	9,441,642 – 9,441,762	-	5	120	84.17	-2.24	0.58	0.620616
2676	2R_DroMel_CAF1	9,442,465 – 9,442,559	- - - - - - - - -	4401	9,442,465 – 9,442,559	+	6	100	86.95	-2.24	0.84	0.869743
2677	2R_DroMel_CAF1	9,443,721 – 9,443,857	- - - - - - - - -	4402	9,443,721 – 9,443,838	-	5	119	88.97	-1.83	0.71	0.598862
2677	2R_DroMel_CAF1	9,443,721 – 9,443,857	- - - - - - - - -	4403	9,443,761 – 9,443,857	-	5	98	93.57	-1.20	0.98	0.864074
2678	2R_DroMel_CAF1	9,452,509 – 9,452,600	- - - - - - - - -	4404	9,452,509 – 9,452,600	-	5	103	83.55	-1.82	0.68	0.658157
2679	2R_DroMel_CAF1	9,456,673 – 9,456,849	- - - - - - - - -	4405	9,456,673 – 9,456,788	-	6	120	87.36	-3.85	0.71	0.829938
				4406	9,456,713 – 9,456,815	+	5	104	93.87	-1.28	0.85	0.602299
				4407	9,456,713 – 9,456,815	-	5	104	93.87	-2.89	0.84	0.998805
				4408	9,456,748 – 9,456,849	+	6	120	75.86	-1.88	0.57	0.890637
				4409	9,456,748 – 9,456,849	-	6	120	75.86	-1.75	0.61	0.886095
2680	2R_DroMel_CAF1	9,459,122 – 9,459,219	- - - "knownCDS=Parent=FBtr0087615;Name=CG6646-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6646-RA" - - - - -	4410	9,459,122 – 9,459,219	-	6	103	78.32	-1.71	0.60	0.743793
2681	2R_DroMel_CAF1	9,461,723 – 9,461,858	- - "RNAmicro=f:9461723_t:9461831_strand:+_p:0.517839" - - - - - -	4411	9,461,723 – 9,461,821	+	4	109	74.96	-3.33	0.59	0.999842
				4412	9,461,723 – 9,461,821	-	4	109	74.96	-3.89	0.69	0.999985
				4413	9,461,752 – 9,461,858	-	5	117	78.26	-1.99	0.35	0.651638
2682	2R_DroMel_CAF1	9,466,721 – 9,466,832	- - - "knownCDS=Parent=FBtr0087612, FBtr0087613, FBtr0087614;Name=AGO1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6671-RC, FlyBase+Annotation+IDs:CG6671-RA, FlyBase+Annotation+IDs:CG6671-RB" - - - - -	4414	9,466,721 – 9,466,832	+	6	120	80.79	-1.38	0.76	0.685875
2683	2R_DroMel_CAF1	9,470,142 – 9,470,241	- - - - - - - - -	4415	9,470,142 – 9,470,241	+	6	103	80.99	-2.54	0.57	0.841488
2683	2R_DroMel_CAF1	9,470,142 – 9,470,241	- - - - - - - - -	4416	9,470,142 – 9,470,241	-	6	103	80.99	-1.54	0.68	0.649826
2684	2R_DroMel_CAF1	9,470,609 – 9,470,751	- - - "knownCDS=Parent=FBtr0087612, FBtr0087613;Name=AGO1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6671-RC, FlyBase+Annotation+IDs:CG6671-RA" - - - - -	4417	9,470,609 – 9,470,714	+	6	120	80.55	-3.37	0.67	0.966758
				4418	9,470,609 – 9,470,714	-	6	120	80.55	-3.34	0.71	0.964596
				4419	9,470,637 – 9,470,751	+	6	120	80.88	-2.86	0.68	0.938429
				4420	9,470,637 – 9,470,751	-	6	120	80.88	-2.43	0.75	0.925209
2685	2R_DroMel_CAF1	9,471,423 – 9,471,536	- - - "knownCDS=Parent=FBtr0100451, FBtr0100452, FBtr0100453;Name=CG33155-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33155-RA, FlyBase+Annotation+IDs:CG33155-RC, FlyBase+Annotation+IDs:CG33155-RD" - - - - -	4421	9,471,423 – 9,471,536	-	6	120	77.88	-2.41	0.54	0.940358
2686	2R_DroMel_CAF1	9,484,089 – 9,484,216	- - - - - - - - -	4422	9,484,089 – 9,484,199	-	4	113	81.40	-1.79	0.85	0.867738
				4423	9,484,126 – 9,484,216	+	4	90	87.41	-1.44	0.72	0.534333
				4424	9,484,126 – 9,484,216	-	4	90	87.41	-2.22	0.86	0.961526
2687	2R_DroMel_CAF1	9,489,072 – 9,489,185	- - - - - - - - -	4425	9,489,072 – 9,489,185	-	5	120	70.30	-1.93	0.03	0.748124
2688	2R_DroMel_CAF1	9,493,593 – 9,493,747	- - - "knownCDS=Parent=FBtr0087607;Name=CG6701-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6701-RA" - - - - -	4426	9,493,593 – 9,493,707	+	6	114	78.56	-2.47	0.64	0.966214
				4427	9,493,593 – 9,493,707	-	6	114	78.56	-3.04	0.55	0.983520
				4428	9,493,627 – 9,493,747	-	6	120	78.56	-2.70	0.49	0.942813
2689	2R_DroMel_CAF1	9,495,065 – 9,495,160	- - - "knownCDS=texon1347;Parent=CG_NCBI_GNO_32372976, CG_BATZ_CON_47003865" - - - - -	4429	9,495,065 – 9,495,160	-	6	104	74.30	-1.62	0.53	0.635629
2690	2R_DroMel_CAF1	9,497,629 – 9,497,749	- - - "knownCDS=Parent=FBtr0087606;Name=CG13350-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13350-RA" - - - - -	4430	9,497,629 – 9,497,749	-	6	120	77.89	-1.49	0.64	0.720579
2691	2R_DroMel_CAF1	9,498,325 – 9,498,445	- - - "knownCDS=Parent=FBtr0087606;Name=CG13350-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13350-RA" - - - - -	4431	9,498,325 – 9,498,445	-	6	120	76.06	-1.74	0.54	0.692906
2692	2R_DroMel_CAF1	9,501,619 – 9,501,756	- - - "knownCDS=Parent=FBtr0087603;Name=RN-tre-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8085-RC" - - - - -	4432	9,501,619 – 9,501,716	+	6	117	74.42	-1.28	0.74	0.911637
				4433	9,501,619 – 9,501,716	-	6	117	74.42	-1.68	0.73	0.969589
				4434	9,501,636 – 9,501,756	+	6	120	78.56	-1.63	0.76	0.900057
				4435	9,501,636 – 9,501,756	-	6	120	78.56	-1.42	0.63	0.602850
2693	2R_DroMel_CAF1	9,507,110 – 9,507,230	- - - - - - - - -	4436	9,507,110 – 9,507,230	-	5	120	96.33	-1.07	0.94	0.500000
2694	2R_DroMel_CAF1	9,507,596 – 9,507,810	- - - - - - - - -	4437	9,507,596 – 9,507,714	+	4	120	94.54	-2.30	0.90	0.960086
				4438	9,507,676 – 9,507,772	+	3	96	99.31	-2.05	1.00	0.920228
				4439	9,507,714 – 9,507,810	+	3	96	97.22	-2.50	0.98	0.971231
2695	2R_DroMel_CAF1	9,507,850 – 9,507,970	- - - - - - - - -	4440	9,507,850 – 9,507,970	+	5	120	85.43	-2.69	0.69	0.938495
2695	2R_DroMel_CAF1	9,507,850 – 9,507,970	- - - - - - - - -	4441	9,507,850 – 9,507,970	-	5	120	85.43	-1.58	0.73	0.538373
2696	2R_DroMel_CAF1	9,508,010 – 9,508,168	- - - - - - - - -	4442	9,508,010 – 9,508,129	+	5	120	93.88	-1.79	0.79	0.788808
				4443	9,508,010 – 9,508,129	-	5	120	93.88	-2.36	0.81	0.981715
				4444	9,508,050 – 9,508,168	+	5	120	93.59	-1.46	0.81	0.618766
				4445	9,508,050 – 9,508,168	-	5	120	93.59	-2.14	0.76	0.824176
2697	2R_DroMel_CAF1	9,509,151 – 9,509,309	- - - - - - - - -	4446	9,509,151 – 9,509,270	-	5	120	99.16	-1.76	1.00	0.984480
2697	2R_DroMel_CAF1	9,509,151 – 9,509,309	- - - - - - - - -	4447	9,509,191 – 9,509,309	-	5	120	97.14	-1.53	0.87	0.793480
2698	2R_DroMel_CAF1	9,509,466 – 9,509,659	- - - - - - - - -	4448	9,509,466 – 9,509,586	-	5	120	95.83	-1.68	0.90	0.974348
2698	2R_DroMel_CAF1	9,509,466 – 9,509,659	- - - - - - - - -	4449	9,509,546 – 9,509,659	-	5	120	75.32	-2.41	0.48	0.988450
2699	2R_DroMel_CAF1	9,510,060 – 9,510,459	- - - - - - - - -	4450	9,510,060 – 9,510,180	-	5	120	97.83	-1.81	0.97	0.993339
				4451	9,510,100 – 9,510,220	-	5	120	100.00	-2.35	1.00	0.997847
				4452	9,510,140 – 9,510,260	-	5	120	98.50	-2.36	1.00	0.999562
				4453	9,510,260 – 9,510,379	-	5	120	96.31	-2.92	0.93	0.999919
				4454	9,510,340 – 9,510,459	+	5	120	97.83	-1.79	0.99	0.994420
				4455	9,510,340 – 9,510,459	-	5	120	97.83	-1.53	0.92	0.902356
2700	2R_DroMel_CAF1	9,510,576 – 9,510,798	- - - - - - - - -	4456	9,510,576 – 9,510,696	+	5	120	97.31	-1.46	0.91	0.860245
				4457	9,510,576 – 9,510,696	-	5	120	97.31	-2.75	0.91	0.999484
				4458	9,510,696 – 9,510,798	-	5	120	86.98	-2.70	0.79	0.989566
2701	2R_DroMel_CAF1	9,511,359 – 9,511,596	- - - - - - - - -	4459	9,511,359 – 9,511,476	+	5	120	94.22	-1.19	0.95	0.791489
				4460	9,511,396 – 9,511,516	+	5	120	96.15	-4.97	0.94	0.999696
				4461	9,511,396 – 9,511,516	-	5	120	96.15	-4.60	0.93	0.999842
				4462	9,511,436 – 9,511,556	+	5	120	97.32	-2.58	0.95	0.999770
				4463	9,511,436 – 9,511,556	-	5	120	97.32	-2.76	0.93	0.999748
				4464	9,511,476 – 9,511,596	+	5	120	96.99	-1.37	0.91	0.809007
				4465	9,511,476 – 9,511,596	-	5	120	96.99	-1.88	0.95	0.996179
2702	2R_DroMel_CAF1	9,511,858 – 9,511,975	- - - - - - - - -	4466	9,511,858 – 9,511,975	-	5	120	95.26	-1.57	0.86	0.888796
2703	2R_DroMel_CAF1	9,512,441 – 9,512,561	- - - - - - - - -	4467	9,512,441 – 9,512,561	-	5	120	95.79	-1.59	0.94	0.981783
2704	2R_DroMel_CAF1	9,512,672 – 9,512,803	- - - - - - - - -	4468	9,512,672 – 9,512,792	-	5	120	79.28	-2.11	0.52	0.797468
2704	2R_DroMel_CAF1	9,512,672 – 9,512,803	- - - - - - - - -	4469	9,512,712 – 9,512,803	-	5	91	87.14	-2.74	0.61	0.613133
2705	2R_DroMel_CAF1	9,513,637 – 9,513,750	- - - - - - - - -	4470	9,513,637 – 9,513,750	+	5	120	94.26	-1.46	0.91	0.938040
2705	2R_DroMel_CAF1	9,513,637 – 9,513,750	- - - - - - - - -	4471	9,513,637 – 9,513,750	-	5	120	94.26	-1.51	0.90	0.938273
2706	2R_DroMel_CAF1	9,513,981 – 9,514,126	- - - - - - - - -	4472	9,513,981 – 9,514,101	-	5	120	92.50	-1.67	0.81	0.815706
				4473	9,514,021 – 9,514,126	+	4	119	86.61	-3.36	0.89	0.998008
				4474	9,514,021 – 9,514,126	-	4	119	86.61	-3.25	0.83	0.995321
2707	2R_DroMel_CAF1	9,514,505 – 9,514,623	- - - - - - - - -	4475	9,514,505 – 9,514,623	-	5	120	93.68	-1.23	0.87	0.598796
2708	2R_DroMel_CAF1	9,515,009 – 9,515,166	- - - - - - - - -	4476	9,515,009 – 9,515,126	+	5	120	94.68	-1.78	0.96	0.997420
2708	2R_DroMel_CAF1	9,515,009 – 9,515,166	- - - - - - - - -	4477	9,515,047 – 9,515,166	+	5	120	93.57	-1.37	0.88	0.804599
2709	2R_DroMel_CAF1	9,517,682 – 9,517,838	- - - - - - - - -	4478	9,517,682 – 9,517,801	+	4	120	95.83	-2.40	0.95	0.976654
				4479	9,517,682 – 9,517,801	-	4	120	95.83	-1.62	0.93	0.708807
				4480	9,517,721 – 9,517,838	+	5	120	92.72	-1.55	0.85	0.859101
				4481	9,517,721 – 9,517,838	-	5	120	92.72	-2.31	0.94	0.999780
2710	2R_DroMel_CAF1	9,517,988 – 9,518,165	- - - - - - - - -	4482	9,517,988 – 9,518,108	-	5	120	99.00	-1.50	1.00	0.935452
				4483	9,518,028 – 9,518,148	+	5	120	98.17	-2.54	0.96	0.999624
				4484	9,518,028 – 9,518,148	-	5	120	98.17	-2.04	1.01	0.998735
				4485	9,518,068 – 9,518,165	+	4	100	93.32	-3.09	0.87	0.983673
				4486	9,518,068 – 9,518,165	-	4	100	93.32	-1.75	0.97	0.925188
2711	2R_DroMel_CAF1	9,518,376 – 9,518,482	- - - - - - - - -	4487	9,518,376 – 9,518,482	-	4	120	89.53	-1.83	0.91	0.921036
2712	2R_DroMel_CAF1	9,520,234 – 9,520,339	- - - - - - - - -	4488	9,520,234 – 9,520,339	+	3	120	81.92	-1.61	0.76	0.623634
2713	2R_DroMel_CAF1	9,520,494 – 9,520,653	- - - - - - - - -	4489	9,520,494 – 9,520,613	-	4	120	94.28	-1.97	0.89	0.887462
2713	2R_DroMel_CAF1	9,520,494 – 9,520,653	- - - - - - - - -	4490	9,520,533 – 9,520,653	-	5	120	97.00	-1.28	0.88	0.555914
2714	2R_DroMel_CAF1	9,520,891 – 9,521,006	- - - - - - - - -	4491	9,520,891 – 9,521,006	-	5	120	91.36	-1.57	0.76	0.533341
2715	2R_DroMel_CAF1	9,521,614 – 9,522,008	- - - "knownCDS=Parent=FBtr0087602;Name=CG30482-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30482-RA" - - - - -	4492	9,521,614 – 9,521,734	+	5	120	96.31	-2.39	0.91	0.999318
				4493	9,521,614 – 9,521,734	-	5	120	96.31	-1.47	0.95	0.955178
				4494	9,521,654 – 9,521,774	+	5	120	96.98	-3.22	0.96	0.999961
				4495	9,521,654 – 9,521,774	-	5	120	96.98	-1.24	0.91	0.648260
				4496	9,521,734 – 9,521,854	+	5	120	96.23	-1.35	0.85	0.534345
				4497	9,521,734 – 9,521,854	-	5	120	96.23	-1.76	0.88	0.964982
				4498	9,521,774 – 9,521,894	+	5	120	87.32	-2.15	0.76	0.904446
				4499	9,521,854 – 9,521,971	-	4	120	92.89	-2.61	0.82	0.938425
				4500	9,521,894 – 9,522,008	-	4	120	93.08	-1.90	0.84	0.818653
2716	2R_DroMel_CAF1	9,522,048 – 9,522,326	- - - - - - - - -	4501	9,522,048 – 9,522,166	+	4	120	93.87	-2.29	0.91	0.970155
				4502	9,522,048 – 9,522,166	-	4	120	93.87	-1.56	0.84	0.539819
				4503	9,522,086 – 9,522,206	-	4	120	97.92	-1.85	0.95	0.739750
				4504	9,522,206 – 9,522,326	+	4	120	96.25	-1.88	0.96	0.888219
				4505	9,522,206 – 9,522,326	-	4	120	96.25	-2.16	0.94	0.937471
2717	2R_DroMel_CAF1	9,528,932 – 9,529,025	- - - - - - - - -	4506	9,528,932 – 9,529,025	+	6	96	80.68	-2.50	0.46	0.574347
2718	2R_DroMel_CAF1	9,530,599 – 9,530,750	- - - - - - - - -	4507	9,530,599 – 9,530,691	+	4	111	81.93	-2.13	0.58	0.696603
				4508	9,530,656 – 9,530,750	+	5	99	82.63	-2.00	0.65	0.764558
				4509	9,530,656 – 9,530,750	-	5	99	82.63	-2.08	0.63	0.769300
2719	2R_DroMel_CAF1	9,532,164 – 9,532,265	- - - - - - - - -	4510	9,532,164 – 9,532,265	-	6	102	88.08	-2.76	0.76	0.644227
2720	2R_DroMel_CAF1	9,534,205 – 9,534,301	- - - - - - - - -	4511	9,534,205 – 9,534,301	+	5	97	92.90	-1.96	0.75	0.650687
2721	2R_DroMel_CAF1	9,535,406 – 9,535,500	- - - - - - - - -	4512	9,535,406 – 9,535,500	-	5	102	91.03	-1.48	0.79	0.601915
2722	2R_DroMel_CAF1	9,543,400 – 9,543,511	- - - - - - - - -	4513	9,543,400 – 9,543,511	+	5	111	100.00	-1.76	1.00	0.966509
2722	2R_DroMel_CAF1	9,543,400 – 9,543,511	- - - - - - - - -	4514	9,543,400 – 9,543,511	-	5	111	100.00	-1.90	1.00	0.984322
2723	2R_DroMel_CAF1	9,545,124 – 9,545,228	- - - - - - - - -	4515	9,545,124 – 9,545,228	+	6	104	79.70	-1.89	0.55	0.595937
2724	2R_DroMel_CAF1	9,548,862 – 9,548,955	- - - - - - - - -	4516	9,548,862 – 9,548,955	+	5	107	71.47	-2.05	0.34	0.933374
2724	2R_DroMel_CAF1	9,548,862 – 9,548,955	- - - - - - - - -	4517	9,548,862 – 9,548,955	-	5	107	71.47	-1.73	0.30	0.616734
2725	2R_DroMel_CAF1	9,552,863 – 9,552,953	- - - - - - - - -	4518	9,552,863 – 9,552,953	-	6	108	82.04	-1.98	0.62	0.614031
2726	2R_DroMel_CAF1	9,553,364 – 9,553,465	- - - - - - - - -	4519	9,553,364 – 9,553,465	+	5	102	89.55	-2.16	0.74	0.858285
2727	2R_DroMel_CAF1	9,555,743 – 9,555,860	- - - "knownCDS=Parent=FBtr0087596;Name=mam-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8118-RA" - - - - -	4520	9,555,743 – 9,555,860	-	6	120	79.79	-1.94	0.59	0.754605
2728	2R_DroMel_CAF1	9,557,311 – 9,557,401	- - - - - - - - -	4521	9,557,311 – 9,557,401	+	5	109	81.46	-2.62	0.78	0.990311
2728	2R_DroMel_CAF1	9,557,311 – 9,557,401	- - - - - - - - -	4522	9,557,311 – 9,557,401	-	5	109	81.46	-2.04	0.61	0.764259
2729	2R_DroMel_CAF1	9,558,687 – 9,558,814	- - - - - - - - -	4523	9,558,687 – 9,558,784	-	5	109	80.72	-1.82	0.64	0.704283
				4524	9,558,715 – 9,558,814	+	5	99	93.13	-1.20	0.89	0.624513
				4525	9,558,715 – 9,558,814	-	5	99	93.13	-1.65	0.84	0.897724
2730	2R_DroMel_CAF1	9,572,597 – 9,572,701	- - - "knownCDS=Parent=FBtr0087596;Name=mam-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8118-RA" - - - - -	4526	9,572,597 – 9,572,701	-	3	104	95.51	-2.02	0.96	0.878161
2731	2R_DroMel_CAF1	9,576,583 – 9,576,684	- - - - - - - - -	4527	9,576,583 – 9,576,684	+	3	120	84.16	-1.40	0.92	0.833149
2732	2R_DroMel_CAF1	9,577,839 – 9,578,039	- - - - - - - - -	4528	9,577,839 – 9,577,959	+	3	120	93.89	-1.57	0.93	0.536831
				4529	9,577,879 – 9,577,999	+	3	120	96.11	-2.38	0.93	0.920084
				4530	9,577,879 – 9,577,999	-	3	120	96.11	-2.47	0.95	0.952124
				4531	9,577,919 – 9,578,039	+	3	120	97.22	-1.82	0.88	0.506415
2733	2R_DroMel_CAF1	9,578,435 – 9,578,555	- - - "knownCDS=Parent=FBtr0087601;Name=Prosap-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30483-RA" - - - - -	4532	9,578,435 – 9,578,555	-	3	120	96.11	-2.01	0.97	0.890362
2734	2R_DroMel_CAF1	9,580,032 – 9,580,152	- - - "knownCDS=Parent=FBtr0087601;Name=Prosap-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30483-RA" - - - - -	4533	9,580,032 – 9,580,152	-	3	120	89.83	-1.77	0.84	0.510955
2735	2R_DroMel_CAF1	9,580,844 – 9,581,004	- - - "knownCDS=Parent=FBtr0087601;Name=Prosap-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30483-RA" - - - - -	4534	9,580,844 – 9,580,964	+	3	120	94.44	-2.18	0.84	0.622277
2735	2R_DroMel_CAF1	9,580,844 – 9,581,004		4535	9,580,884 – 9,581,004	+	3	120	95.56	-1.72	0.93	0.629342
2736	2R_DroMel_CAF1	9,582,264 – 9,582,424	- - - "knownCDS=Parent=FBtr0087601;Name=Prosap-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30483-RA" - - - - -	4536	9,582,264 – 9,582,384	-	3	120	97.22	-1.38	1.00	0.581556
2736	2R_DroMel_CAF1	9,582,264 – 9,582,424		4537	9,582,304 – 9,582,424	-	3	120	95.00	-1.65	0.97	0.740502
2737	2R_DroMel_CAF1	9,583,427 – 9,583,547	- - - "knownCDS=Parent=FBtr0087601;Name=Prosap-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30483-RA" - - - - -	4538	9,583,427 – 9,583,547	-	3	120	96.67	-1.92	0.96	0.821837
2738	2R_DroMel_CAF1	9,583,976 – 9,584,096	- - - - - - - - -	4539	9,583,976 – 9,584,096	+	3	120	96.39	-2.35	0.87	0.790658
2739	2R_DroMel_CAF1	9,584,558 – 9,584,710	- - - - - - - - -	4540	9,584,558 – 9,584,673	-	3	120	90.99	-2.53	0.90	0.942994
2739	2R_DroMel_CAF1	9,584,558 – 9,584,710	- - - - - - - - -	4541	9,584,593 – 9,584,710	-	3	120	92.16	-1.65	1.00	0.889534
2740	2R_DroMel_CAF1	9,585,188 – 9,585,336	- - - "knownCDS=Parent=FBtr0087601;Name=Prosap-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30483-RA" - - - - -	4542	9,585,188 – 9,585,308	-	6	120	91.33	-2.50	0.90	0.995257
				4543	9,585,228 – 9,585,336	+	6	116	80.20	-1.79	0.77	0.872780
				4544	9,585,228 – 9,585,336	-	6	116	80.20	-2.53	0.91	0.970132
2741	2R_DroMel_CAF1	9,586,480 – 9,586,591	- - - - - - - - -	4545	9,586,480 – 9,586,591	-	6	115	77.57	-1.54	0.57	0.537032
2742	2R_DroMel_CAF1	9,589,339 – 9,589,430	- - - - - - - - -	4546	9,589,339 – 9,589,430	+	5	100	93.66	-2.16	0.82	0.977576
2743	2R_DroMel_CAF1	9,591,999 – 9,592,096	- - - - - - - - -	4547	9,591,999 – 9,592,096	+	4	97	94.67	-1.88	0.85	0.767582
2744	2R_DroMel_CAF1	9,592,448 – 9,592,538	- - - - - - - - -	4548	9,592,448 – 9,592,538	-	6	90	83.83	-1.47	0.86	0.607844
2745	2R_DroMel_CAF1	9,592,617 – 9,592,724	- - - - - - - - -	4549	9,592,617 – 9,592,724	-	5	110	78.81	-1.96	0.82	0.958264
2746	2R_DroMel_CAF1	9,594,312 – 9,594,410	- - - - - - - - -	4550	9,594,312 – 9,594,410	-	5	105	90.96	-1.87	0.73	0.594636
2747	2R_DroMel_CAF1	9,598,692 – 9,598,788	- - - - - - - - -	4551	9,598,692 – 9,598,788	+	6	102	73.79	-2.16	0.45	0.921606
2747	2R_DroMel_CAF1	9,598,692 – 9,598,788	- - - - - - - - -	4552	9,598,692 – 9,598,788	-	6	102	73.79	-2.00	0.35	0.500000
2748	2R_DroMel_CAF1	9,602,852 – 9,602,942	- - - - - - - - -	4553	9,602,852 – 9,602,942	-	6	95	73.39	-2.00	0.45	0.843647
2749	2R_DroMel_CAF1	9,607,970 – 9,608,157	- - - - - - - - -	4554	9,607,970 – 9,608,090	-	6	120	90.39	-1.66	0.90	0.888512
				4555	9,608,010 – 9,608,130	+	6	120	91.50	-2.17	0.87	0.952877
				4556	9,608,010 – 9,608,130	-	6	120	91.50	-1.96	0.86	0.888243
				4557	9,608,050 – 9,608,157	+	6	119	81.40	-1.21	0.77	0.547820
				4558	9,608,050 – 9,608,157	-	6	119	81.40	-1.97	0.68	0.786224
2750	2R_DroMel_CAF1	9,628,553 – 9,628,670	- - - - - - - - -	4559	9,628,553 – 9,628,649	+	6	119	74.07	-2.23	0.48	0.955281
2750	2R_DroMel_CAF1	9,628,553 – 9,628,670	- - - - - - - - -	4560	9,628,579 – 9,628,670	+	6	96	85.05	-3.06	0.67	0.635495
2751	2R_DroMel_CAF1	9,629,522 – 9,629,632	- - - - - - - - -	4561	9,629,522 – 9,629,632	-	5	110	80.87	-2.02	0.72	0.896295
2752	2R_DroMel_CAF1	9,633,775 – 9,633,886	- - - - - - - - -	4562	9,633,775 – 9,633,886	+	5	111	87.55	-1.90	0.69	0.575732
2753	2R_DroMel_CAF1	9,636,687 – 9,636,794	- - - - - - - - -	4563	9,636,687 – 9,636,794	-	5	107	92.69	-1.74	0.77	0.698366
2754	2R_DroMel_CAF1	9,639,223 – 9,639,317	- - - - - - - - -	4564	9,639,223 – 9,639,317	+	6	100	68.75	-1.49	0.58	0.845389
2755	2R_DroMel_CAF1	9,662,116 – 9,662,207	- - - - - - - - -	4565	9,662,116 – 9,662,207	-	3	93	85.25	-2.55	0.64	0.713941
2756	2R_DroMel_CAF1	9,662,590 – 9,662,690	- - - - - - - - -	4566	9,662,590 – 9,662,690	+	4	101	86.20	-1.16	0.95	0.516539
2757	2R_DroMel_CAF1	9,669,318 – 9,669,423	- - - "knownCDS=Parent=FBtr0087518;Name=CG8241-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8241-RA" - - - - -	4567	9,669,318 – 9,669,423	-	6	108	80.69	-1.56	0.67	0.663781
2758	2R_DroMel_CAF1	9,671,641 – 9,671,761	- - - "knownCDS=Parent=FBtr0087518;Name=CG8241-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8241-RA" - - - - -	4568	9,671,641 – 9,671,761	+	6	120	80.33	-1.62	0.65	0.688069
2759	2R_DroMel_CAF1	9,673,942 – 9,674,095	- - - - - - - - -	4569	9,673,942 – 9,674,061	+	6	120	78.46	-1.71	0.55	0.557148
2759	2R_DroMel_CAF1	9,673,942 – 9,674,095	- - - - - - - - -	4570	9,673,982 – 9,674,095	+	6	117	80.52	-1.56	0.65	0.626333
2760	2R_DroMel_CAF1	9,676,230 – 9,676,334	- - - "knownCDS=Parent=FBtr0087580;Name=CG8257-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8257-RA" - - - - -	4571	9,676,230 – 9,676,334	+	6	105	80.04	-1.83	0.63	0.763413
2760	2R_DroMel_CAF1	9,676,230 – 9,676,334		4572	9,676,230 – 9,676,334	-	6	105	80.04	-1.34	0.66	0.566444
2761	2R_DroMel_CAF1	9,677,731 – 9,677,851	- - - "knownCDS=Parent=FBtr0087520;Name=O-fut1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12366-RA" - - - - -	4573	9,677,731 – 9,677,851	+	6	120	80.72	-1.53	0.61	0.500000
2762	2R_DroMel_CAF1	9,678,860 – 9,678,954	- - - - - - - - -	4574	9,678,860 – 9,678,954	-	4	94	93.61	-2.02	0.81	0.754974
2763	2R_DroMel_CAF1	9,680,942 – 9,681,054	- - - - - - - - -	4575	9,680,942 – 9,681,054	+	5	112	90.16	-1.98	0.73	0.728644
2763	2R_DroMel_CAF1	9,680,942 – 9,681,054	- - - - - - - - -	4576	9,680,942 – 9,681,054	-	5	112	90.16	-1.80	0.72	0.578827
2764	2R_DroMel_CAF1	9,681,633 – 9,681,735	- - - - - - - - -	4577	9,681,633 – 9,681,735	+	5	102	91.37	-1.94	0.82	0.957795
2764	2R_DroMel_CAF1	9,681,633 – 9,681,735	- - - - - - - - -	4578	9,681,633 – 9,681,735	-	5	102	91.37	-1.73	0.80	0.839566
2765	2R_DroMel_CAF1	9,682,660 – 9,682,755	- - "RNAmicro=f:9682660_t:9682768_strand:-_p:0.500000" - - - - - -	4579	9,682,660 – 9,682,755	+	5	109	73.05	-1.77	0.55	0.793267
2765	2R_DroMel_CAF1	9,682,660 – 9,682,755		4580	9,682,660 – 9,682,755	-	5	109	73.05	-3.78	0.60	0.999924
2766	2R_DroMel_CAF1	9,683,786 – 9,683,946	- - - "knownCDS=Parent=FBtr0087522;Name=CG18327-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18327-RA" - - - - -	4581	9,683,786 – 9,683,906	+	4	120	94.58	-1.69	0.83	0.553594
2766	2R_DroMel_CAF1	9,683,786 – 9,683,946		4582	9,683,826 – 9,683,946	+	4	120	93.33	-1.40	0.87	0.506732
2767	2R_DroMel_CAF1	9,684,725 – 9,684,845	- - - - - - - - -	4583	9,684,725 – 9,684,845	-	4	120	89.54	-1.86	0.87	0.895725
2768	2R_DroMel_CAF1	9,686,307 – 9,686,423	- - - - - - - - -	4584	9,686,307 – 9,686,423	+	5	120	76.49	-1.81	0.47	0.557598
2769	2R_DroMel_CAF1	9,687,645 – 9,687,737	- - - - - - - - -	4585	9,687,645 – 9,687,737	+	5	92	92.28	-2.06	0.85	0.988756
2769	2R_DroMel_CAF1	9,687,645 – 9,687,737	- - - - - - - - -	4586	9,687,645 – 9,687,737	-	5	92	92.28	-1.22	0.90	0.693707
2770	2R_DroMel_CAF1	9,688,458 – 9,688,557	- - - - - - - - -	4587	9,688,458 – 9,688,557	+	6	110	81.62	-1.87	0.79	0.832308
2771	2R_DroMel_CAF1	9,689,143 – 9,689,247	- - - - - - - - -	4588	9,689,143 – 9,689,247	+	6	107	82.35	-1.97	0.66	0.661069
2772	2R_DroMel_CAF1	9,690,731 – 9,690,846	- - - - - - - - -	4589	9,690,731 – 9,690,846	+	5	115	96.17	-2.74	0.94	0.999915
2772	2R_DroMel_CAF1	9,690,731 – 9,690,846	- - - - - - - - -	4590	9,690,731 – 9,690,846	-	5	115	96.17	-1.30	0.89	0.691120
2773	2R_DroMel_CAF1	9,690,867 – 9,690,999	- - - - - - - - -	4591	9,690,867 – 9,690,959	+	3	92	97.10	-2.21	0.94	0.886495
2773	2R_DroMel_CAF1	9,690,867 – 9,690,999	- - - - - - - - -	4592	9,690,887 – 9,690,999	+	5	112	86.13	-2.35	0.86	0.989420
2774	2R_DroMel_CAF1	9,693,029 – 9,693,134	- - - - - - - - -	4593	9,693,029 – 9,693,134	-	5	105	95.81	-2.42	0.93	0.999707
2775	2R_DroMel_CAF1	9,695,749 – 9,695,852	- - - "knownCDS=Parent=FBtr0087526, FBtr0087527, FBtr0087528, FBtr0087529;Name=cg-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8367-RD, FlyBase+Annotation+IDs:CG8367-RB, FlyBase+Annotation+IDs:CG8367-RC, FlyBase+Annotation+IDs:CG8367-RA" - - - - -	4594	9,695,749 – 9,695,852	+	6	120	85.46	-1.98	0.85	0.817007
2776	2R_DroMel_CAF1	9,697,624 – 9,697,714	- - - - - - - - -	4595	9,697,624 – 9,697,714	-	6	99	82.60	-2.11	0.58	0.500000
2777	2R_DroMel_CAF1	9,715,506 – 9,715,597	- - - "knownCDS=Parent=FBtr0087577;Name=CG8394-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8394-RA" - - - - -	4596	9,715,506 – 9,715,597	+	6	100	78.92	-2.31	0.66	0.947929
2778	2R_DroMel_CAF1	9,717,675 – 9,717,792	- - - "knownCDS=Parent=FBtr0087576;Name=Sox15-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8404-RA" - - - - -	4597	9,717,675 – 9,717,792	-	6	117	77.08	-1.04	0.69	0.569823
2779	2R_DroMel_CAF1	9,718,193 – 9,718,301	- - - "knownCDS=Parent=FBtr0087576;Name=Sox15-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8404-RA" - - - - -	4598	9,718,193 – 9,718,301	+	6	120	76.13	-0.84	0.77	0.656018
2780	2R_DroMel_CAF1	9,720,810 – 9,720,920	- - - - - - - - -	4599	9,720,810 – 9,720,920	+	6	120	94.57	-1.10	0.90	0.560462
2780	2R_DroMel_CAF1	9,720,810 – 9,720,920	- - - - - - - - -	4600	9,720,810 – 9,720,920	-	6	120	94.57	-1.06	0.90	0.538018
2781	2R_DroMel_CAF1	9,721,114 – 9,721,205	- - - - - - - - -	4601	9,721,114 – 9,721,205	-	4	98	76.70	-2.72	0.71	0.999137
2782	2R_DroMel_CAF1	9,722,313 – 9,722,454	- - - - - - - - -	4602	9,722,313 – 9,722,415	+	5	102	86.42	-1.87	0.74	0.737015
				4603	9,722,345 – 9,722,454	+	4	109	86.88	-1.71	0.72	0.683285
				4604	9,722,345 – 9,722,454	-	4	109	86.88	-1.95	0.71	0.769984
2783	2R_DroMel_CAF1	9,725,181 – 9,725,314	- - - - - - - - -	4605	9,725,181 – 9,725,294	+	6	114	94.38	-2.10	0.83	0.797432
				4606	9,725,181 – 9,725,294	-	6	114	94.38	-1.36	0.96	0.980278
				4607	9,725,220 – 9,725,314	+	6	94	95.74	-2.87	0.89	0.998408
				4608	9,725,220 – 9,725,314	-	6	94	95.74	-2.21	0.96	0.999735
2784	2R_DroMel_CAF1	9,726,620 – 9,726,720	- - - - - - - - -	4609	9,726,620 – 9,726,720	+	5	103	88.32	-1.46	0.83	0.634954
2784	2R_DroMel_CAF1	9,726,620 – 9,726,720	- - - - - - - - -	4610	9,726,620 – 9,726,720	-	5	103	88.32	-1.52	0.87	0.772509
2785	2R_DroMel_CAF1	9,727,517 – 9,727,608	- - - - - - - - -	4611	9,727,517 – 9,727,608	-	4	97	88.12	-1.99	0.76	0.828197
2786	2R_DroMel_CAF1	9,728,485 – 9,728,589	- - - - - - - - -	4612	9,728,485 – 9,728,589	+	6	107	89.44	-3.33	0.79	0.902464
2786	2R_DroMel_CAF1	9,728,485 – 9,728,589	- - - - - - - - -	4613	9,728,485 – 9,728,589	-	6	107	89.44	-3.83	0.76	0.929517
2787	2R_DroMel_CAF1	9,728,672 – 9,728,762	- - - - - - - - -	4614	9,728,672 – 9,728,762	+	6	103	82.81	-2.32	0.61	0.602112
2788	2R_DroMel_CAF1	9,729,367 – 9,729,458	- - - - - - - - -	4615	9,729,367 – 9,729,458	-	6	107	77.79	-2.57	0.41	0.851355
2789	2R_DroMel_CAF1	9,730,628 – 9,730,755	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002257; Name=dme-mir-308" - "RNAmicro=f:9730649_t:9730757_strand:-_p:0.996418" - - - "miRBase=dme-mir-308\|8e-31" - "Flybase=FBgn0067696:mir-308:microRNA_encoding_gene\|9e-07"	4616	9,730,628 – 9,730,726	+	6	109	77.33	-1.69	0.60	0.789801
				4617	9,730,628 – 9,730,726	-	6	109	77.33	-2.53	0.78	0.981116
				4618	9,730,649 – 9,730,755	+	6	109	81.31	-2.83	0.69	0.927043
				4619	9,730,649 – 9,730,755	-	6	109	81.31	-3.70	0.84	0.970707
2790	2R_DroMel_CAF1	9,730,790 – 9,730,883	- - - "knownCDS=Parent=FBtr0087575;Name=RpS23-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8415-RA" - - - - -	4620	9,730,790 – 9,730,883	+	6	102	77.22	-1.52	0.72	0.894456
2791	2R_DroMel_CAF1	9,734,290 – 9,734,390	- - - - - - - - -	4621	9,734,290 – 9,734,390	+	3	100	82.65	-0.14	0.98	0.861811
2792	2R_DroMel_CAF1	9,734,412 – 9,734,515	- - - - - - - - -	4622	9,734,412 – 9,734,515	+	5	109	73.89	-1.54	0.61	0.632507
2793	2R_DroMel_CAF1	9,735,321 – 9,735,421	- - - - - - - - -	4623	9,735,321 – 9,735,421	-	4	102	85.69	-2.87	0.68	0.953310
2794	2R_DroMel_CAF1	9,735,864 – 9,735,968	- - - - - - - - -	4624	9,735,864 – 9,735,968	+	4	112	77.92	-1.11	0.97	0.945809
2795	2R_DroMel_CAF1	9,737,455 – 9,737,595	- - - - - - - - -	4625	9,737,455 – 9,737,562	+	4	114	82.09	-2.48	0.71	0.974904
				4626	9,737,455 – 9,737,562	-	4	114	82.09	-3.46	0.64	0.995677
				4627	9,737,486 – 9,737,595	+	4	115	84.38	-2.37	0.60	0.744142
2796	2R_DroMel_CAF1	9,740,746 – 9,740,844	- - - - - - - - -	4628	9,740,746 – 9,740,844	+	6	109	74.01	-1.95	0.46	0.796473
2797	2R_DroMel_CAF1	9,744,451 – 9,744,550	- - - - - - - - -	4629	9,744,451 – 9,744,550	-	5	118	74.71	-1.75	0.34	0.585220
2798	2R_DroMel_CAF1	9,745,978 – 9,746,118	- - - "knownCDS=Parent=FBtr0087573, FBtr0087574;Name=CG8479-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8479-RB, FlyBase+Annotation+IDs:CG8479-RA" - - - - -	4630	9,745,978 – 9,746,084	+	6	108	83.34	-3.19	0.69	0.861207
				4631	9,745,978 – 9,746,084	-	6	108	83.34	-2.03	0.68	0.595621
				4632	9,746,012 – 9,746,118	+	6	106	79.99	-2.02	0.58	0.743264
2799	2R_DroMel_CAF1	9,748,990 – 9,749,104	- - - - - - - - -	4633	9,748,990 – 9,749,104	-	6	115	77.04	-1.80	0.59	0.837015
2800	2R_DroMel_CAF1	9,751,537 – 9,751,643	- - - "knownCDS=Parent=FBtr0087570, FBtr0087572;Name=CG8485-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8485-RD, FlyBase+Annotation+IDs:CG8485-RC" - - - - -	4634	9,751,537 – 9,751,643	-	6	116	80.93	-2.05	0.67	0.825947
2801	2R_DroMel_CAF1	9,752,601 – 9,752,709	- - - "knownCDS=Parent=FBtr0087569, FBtr0087571;Name=CG8485-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8485-RA, FlyBase+Annotation+IDs:CG8485-RB" - - - - -	4635	9,752,601 – 9,752,709	-	6	110	86.69	-2.63	0.83	0.904846
2802	2R_DroMel_CAF1	9,754,427 – 9,754,525	- - - - - - - - -	4636	9,754,427 – 9,754,525	-	5	99	94.67	-1.36	0.85	0.668726
2803	2R_DroMel_CAF1	9,760,599 – 9,760,692	- - - "knownCDS=Parent=FBtr0087536;Name=CG8503-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8503-RA" - - - - -	4637	9,760,599 – 9,760,692	+	6	95	75.18	-1.20	0.70	0.807254
2803	2R_DroMel_CAF1	9,760,599 – 9,760,692		4638	9,760,599 – 9,760,692	-	6	95	75.18	-1.90	0.62	0.946719
2804	2R_DroMel_CAF1	9,761,738 – 9,761,837	- - - - - - - - -	4639	9,761,738 – 9,761,837	-	4	99	86.03	-2.18	0.77	0.918878
2805	2R_DroMel_CAF1	9,766,120 – 9,766,211	- - - - - - - - -	4640	9,766,120 – 9,766,211	+	6	98	73.05	-1.96	0.43	0.771817
2806	2R_DroMel_CAF1	9,769,451 – 9,769,569	- - - - - - - - -	4641	9,769,451 – 9,769,569	-	6	120	75.50	-1.30	0.69	0.836415
2807	2R_DroMel_CAF1	9,773,847 – 9,773,943	- - - - - - - - -	4642	9,773,847 – 9,773,943	-	6	105	80.89	-1.46	0.71	0.667789
2808	2R_DroMel_CAF1	9,778,199 – 9,778,313	- - - "knownCDS=Parent=FBtr0087566, FBtr0087567;Name=CG8547-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8547-RA, FlyBase+Annotation+IDs:CG8547-RB" - - - - -	4643	9,778,199 – 9,778,313	-	6	114	80.79	-1.71	0.66	0.712172
2809	2R_DroMel_CAF1	9,794,569 – 9,794,682	- - "RNAmicro=f:9794569_t:9794688_strand:-_p:0.900198" - - - - - -	4644	9,794,569 – 9,794,682	+	5	120	75.63	-3.04	0.59	0.999466
2809	2R_DroMel_CAF1	9,794,569 – 9,794,682		4645	9,794,569 – 9,794,682	-	5	120	75.63	-3.37	0.45	0.999788
2810	2R_DroMel_CAF1	9,795,879 – 9,795,982	- - - - - - - - -	4646	9,795,879 – 9,795,982	+	5	103	98.25	-2.19	0.99	0.999104
2811	2R_DroMel_CAF1	9,797,242 – 9,797,378	- - - - - - - - -	4647	9,797,242 – 9,797,355	-	6	118	72.93	-2.16	0.44	0.932175
2811	2R_DroMel_CAF1	9,797,242 – 9,797,378	- - - - - - - - -	4648	9,797,280 – 9,797,378	+	3	101	92.72	-1.46	0.99	0.737989
2812	2R_DroMel_CAF1	9,799,387 – 9,799,484	- - - - - - - - -	4649	9,799,387 – 9,799,484	+	6	110	76.34	-2.05	0.41	0.500000
2813	2R_DroMel_CAF1	9,801,538 – 9,801,629	- - - "knownCDS=Parent=FBtr0100369, FBtr0100372;Name=Ih-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8585-RB, FlyBase+Annotation+IDs:CG8585-RE" - - - - -	4650	9,801,538 – 9,801,629	-	6	91	79.45	-1.86	0.71	0.892051
2814	2R_DroMel_CAF1	9,806,313 – 9,806,544	- - - "knownCDS=Parent=FBtr0100369, FBtr0100372;Name=Ih-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8585-RB, FlyBase+Annotation+IDs:CG8585-RE" - - - - -	4651	9,806,313 – 9,806,433	+	6	120	94.44	-1.14	0.89	0.500000
				4652	9,806,353 – 9,806,473	+	6	120	92.00	-2.11	0.83	0.801027
				4653	9,806,393 – 9,806,513	+	6	120	92.61	-1.15	0.90	0.573841
				4654	9,806,433 – 9,806,544	+	6	120	87.17	-1.45	0.93	0.793464
2815	2R_DroMel_CAF1	9,806,588 – 9,806,691	- - - "knownCDS=Parent=FBtr0100370, FBtr0100371;Name=Ih-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8585-RC, FlyBase+Annotation+IDs:CG8585-RD" - - - - -	4655	9,806,588 – 9,806,691	+	6	111	84.24	-2.00	0.74	0.602497
2816	2R_DroMel_CAF1	9,807,059 – 9,807,174	- - - "knownCDS=Parent=FBtr0100372;Name=Ih-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8585-RE" - - - - -	4656	9,807,059 – 9,807,174	-	6	120	89.82	-2.21	0.82	0.734448
2817	2R_DroMel_CAF1	9,807,486 – 9,807,590	- - - - - - - - -	4657	9,807,486 – 9,807,590	+	4	120	69.21	-3.04	0.51	0.999578
2817	2R_DroMel_CAF1	9,807,486 – 9,807,590	- - - - - - - - -	4658	9,807,486 – 9,807,590	-	4	120	69.21	-3.77	0.53	0.999941
2818	2R_DroMel_CAF1	9,812,717 – 9,812,813	- - - - - - - - -	4659	9,812,717 – 9,812,813	+	6	99	78.69	-2.06	0.72	0.944151
2819	2R_DroMel_CAF1	9,816,763 – 9,816,872	- - - "knownCDS=Parent=FBtr0087562;Name=CG8589-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8589-RA" - - - - -	4660	9,816,763 – 9,816,872	-	6	114	80.18	-1.68	0.60	0.589075
2820	2R_DroMel_CAF1	9,818,397 – 9,818,506	- - - - - - - - -	4661	9,818,397 – 9,818,506	+	6	120	89.02	-2.81	0.84	0.952679
2821	2R_DroMel_CAF1	9,819,495 – 9,819,590	- - - - - - - - -	4662	9,819,495 – 9,819,590	+	6	120	88.06	-2.00	0.87	0.883966
2821	2R_DroMel_CAF1	9,819,495 – 9,819,590	- - - - - - - - -	4663	9,819,495 – 9,819,590	-	6	120	88.06	-1.88	0.84	0.697600
2822	2R_DroMel_CAF1	9,821,910 – 9,822,028	- - - - - - - - -	4664	9,821,910 – 9,822,001	+	5	97	93.27	-1.16	0.87	0.500000
				4665	9,821,910 – 9,822,001	-	5	97	93.27	-2.25	0.92	0.999431
				4666	9,821,927 – 9,822,028	+	3	102	94.75	-1.80	0.90	0.608222
				4667	9,821,927 – 9,822,028	-	3	102	94.75	-2.75	0.91	0.949696
2823	2R_DroMel_CAF1	9,823,589 – 9,823,683	- - - - - - - - -	4668	9,823,589 – 9,823,683	-	6	120	86.82	-2.58	0.76	0.644998
2824	2R_DroMel_CAF1	9,823,737 – 9,823,898	- - - - - - - - -	4669	9,823,737 – 9,823,828	+	5	91	94.07	-1.55	0.88	0.925028
2824	2R_DroMel_CAF1	9,823,737 – 9,823,898	- - - - - - - - -	4670	9,823,792 – 9,823,898	-	5	112	84.81	-1.81	0.81	0.812143
2825	2R_DroMel_CAF1	9,825,073 – 9,825,189	- - - - - - - - -	4671	9,825,073 – 9,825,189	+	6	120	92.23	-3.12	0.77	0.691768
2826	2R_DroMel_CAF1	9,825,595 – 9,825,701	- - - - - - - - -	4672	9,825,595 – 9,825,701	+	6	120	79.47	-1.76	0.56	0.543910
2827	2R_DroMel_CAF1	9,826,194 – 9,826,331	- - - - - - - - -	4673	9,826,194 – 9,826,304	-	6	120	80.81	-3.02	0.59	0.939770
2827	2R_DroMel_CAF1	9,826,194 – 9,826,331	- - - - - - - - -	4674	9,826,234 – 9,826,331	-	6	120	80.64	-2.09	0.60	0.764807
2828	2R_DroMel_CAF1	9,826,483 – 9,826,573	- - - - - - - - -	4675	9,826,483 – 9,826,573	+	5	97	90.52	-1.66	0.76	0.646311
2829	2R_DroMel_CAF1	9,827,765 – 9,827,866	- - - - - - - - -	4676	9,827,765 – 9,827,866	-	5	104	84.23	-1.64	0.69	0.532010
2830	2R_DroMel_CAF1	9,828,097 – 9,828,243	- - - - - - - - -	4677	9,828,097 – 9,828,205	-	4	113	93.22	-3.51	0.80	0.917801
				4678	9,828,132 – 9,828,243	+	4	113	83.90	-1.87	0.76	0.823990
				4679	9,828,132 – 9,828,243	-	4	113	83.90	-3.63	0.78	0.998080
2831	2R_DroMel_CAF1	9,828,347 – 9,828,456	- - - - - - - - -	4680	9,828,347 – 9,828,456	-	6	120	87.66	-2.13	0.84	0.832678
2832	2R_DroMel_CAF1	9,830,670 – 9,830,777	- - - - - - - - -	4681	9,830,670 – 9,830,777	+	6	120	82.31	-1.54	0.69	0.568878
2833	2R_DroMel_CAF1	9,830,929 – 9,831,020	- - - - - - - - -	4682	9,830,929 – 9,831,020	-	6	120	73.38	-2.47	0.43	0.978372
2834	2R_DroMel_CAF1	9,831,648 – 9,831,808	- - - - - - - - -	4683	9,831,648 – 9,831,768	+	4	120	85.69	-1.84	0.78	0.808227
				4684	9,831,688 – 9,831,808	+	5	120	86.74	-2.41	0.69	0.841127
				4685	9,831,688 – 9,831,808	-	5	120	86.74	-1.61	0.72	0.528108
2835	2R_DroMel_CAF1	9,832,877 – 9,833,057	- - - - - - - - -	4686	9,832,877 – 9,832,983	+	5	118	89.52	-1.85	0.75	0.749970
2835	2R_DroMel_CAF1	9,832,877 – 9,833,057	- - - - - - - - -	4687	9,832,943 – 9,833,057	-	6	120	91.78	-1.49	0.85	0.507060
2836	2R_DroMel_CAF1	9,833,500 – 9,833,596	- - - - - - - - -	4688	9,833,500 – 9,833,596	-	4	120	70.09	-2.08	0.59	0.990268
2837	2R_DroMel_CAF1	9,834,089 – 9,834,191	- - - - - - - - -	4689	9,834,089 – 9,834,191	+	5	103	96.30	-2.06	0.94	0.998721
2837	2R_DroMel_CAF1	9,834,089 – 9,834,191	- - - - - - - - -	4690	9,834,089 – 9,834,191	-	5	103	96.30	-2.69	0.88	0.998900
2838	2R_DroMel_CAF1	9,834,389 – 9,834,494	- - - - - - - - -	4691	9,834,389 – 9,834,494	+	5	114	91.62	-1.30	0.91	0.781306
2838	2R_DroMel_CAF1	9,834,389 – 9,834,494	- - - - - - - - -	4692	9,834,389 – 9,834,494	-	5	114	91.62	-1.92	0.89	0.990916
2839	2R_DroMel_CAF1	9,834,598 – 9,834,700	- - - - - - - - -	4693	9,834,598 – 9,834,700	+	5	106	96.56	-2.24	0.79	0.857213
2839	2R_DroMel_CAF1	9,834,598 – 9,834,700	- - - - - - - - -	4694	9,834,598 – 9,834,700	-	5	106	96.56	-1.68	0.82	0.662521
2840	2R_DroMel_CAF1	9,835,008 – 9,835,127	- - - - - - - - -	4695	9,835,008 – 9,835,127	+	6	120	84.22	-2.04	0.68	0.500000
2841	2R_DroMel_CAF1	9,835,638 – 9,835,757	- - - - - - - - -	4696	9,835,638 – 9,835,757	-	5	120	91.71	-1.45	0.86	0.821156
2842	2R_DroMel_CAF1	9,836,277 – 9,836,395	- - - - - - - - -	4697	9,836,277 – 9,836,395	-	5	119	95.11	-2.01	0.93	0.998469
2843	2R_DroMel_CAF1	9,837,102 – 9,837,195	- - - - - - - - -	4698	9,837,102 – 9,837,195	-	6	120	89.13	-1.78	0.88	0.875615
2844	2R_DroMel_CAF1	9,837,233 – 9,837,334	- - - - - - - - -	4699	9,837,233 – 9,837,334	+	5	101	89.07	-1.37	0.96	0.839944
2845	2R_DroMel_CAF1	9,837,581 – 9,837,690	- - - - - - - - -	4700	9,837,581 – 9,837,690	+	3	111	80.13	-0.64	0.89	0.609216
2845	2R_DroMel_CAF1	9,837,581 – 9,837,690	- - - - - - - - -	4701	9,837,581 – 9,837,690	-	3	111	80.13	-1.54	0.84	0.841239
2846	2R_DroMel_CAF1	9,838,110 – 9,838,222	- - - - - - - - -	4702	9,838,110 – 9,838,222	+	6	120	82.67	-2.29	0.70	0.779085
2847	2R_DroMel_CAF1	9,838,409 – 9,838,519	- - - - - - - - -	4703	9,838,409 – 9,838,519	+	5	118	82.89	-2.05	0.55	0.512942
2848	2R_DroMel_CAF1	9,838,682 – 9,838,791	- - - - - - - - -	4704	9,838,682 – 9,838,791	+	6	120	89.53	-2.20	0.80	0.578592
2849	2R_DroMel_CAF1	9,839,063 – 9,839,404	- - - - - - - - -	4705	9,839,063 – 9,839,177	+	5	114	98.60	-1.68	1.00	0.983219
				4706	9,839,063 – 9,839,177	-	5	114	98.60	-1.99	0.95	0.994271
				4707	9,839,103 – 9,839,217	+	5	114	98.04	-1.33	0.88	0.500000
				4708	9,839,103 – 9,839,217	-	5	114	98.04	-2.36	0.97	0.999502
				4709	9,839,137 – 9,839,248	+	5	111	88.58	-2.39	0.83	0.991169
				4710	9,839,137 – 9,839,248	-	5	111	88.58	-1.74	0.94	0.974491
				4711	9,839,177 – 9,839,270	+	5	111	76.24	-3.00	0.58	0.999227
				4712	9,839,177 – 9,839,270	-	5	111	76.24	-1.57	0.60	0.528432
				4713	9,839,248 – 9,839,348	+	5	118	88.75	-1.64	0.91	0.933411
				4714	9,839,309 – 9,839,404	+	5	101	95.48	-1.65	0.90	0.972223
2850	2R_DroMel_CAF1	9,840,556 – 9,840,667	- - - - - - - - -	4715	9,840,556 – 9,840,667	-	5	111	93.20	-1.24	0.88	0.640663
2851	2R_DroMel_CAF1	9,842,568 – 9,842,661	- - - "knownCDS=Parent=FBtr0087543;Name=CG13942-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13942-RA" - - - - -	4716	9,842,568 – 9,842,661	-	6	104	79.16	-1.35	0.66	0.619690
2852	2R_DroMel_CAF1	9,843,010 – 9,843,182	- - - "knownCDS=Parent=FBtr0087543;Name=CG13942-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13942-RA" - - - - -	4717	9,843,010 – 9,843,117	+	6	113	79.94	-1.17	0.69	0.526709
2852	2R_DroMel_CAF1	9,843,010 – 9,843,182		4718	9,843,083 – 9,843,182	+	6	99	77.21	-1.97	0.51	0.740543
2853	2R_DroMel_CAF1	9,843,635 – 9,843,743	- - - "knownCDS=Parent=FBtr0087543;Name=CG13942-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13942-RA" - - - - -	4719	9,843,635 – 9,843,743	+	6	117	76.82	-1.93	0.54	0.815126
2854	2R_DroMel_CAF1	9,849,193 – 9,849,286	- - - - - - - - -	4720	9,849,193 – 9,849,286	-	6	98	80.88	-1.40	0.67	0.577592
2855	2R_DroMel_CAF1	9,873,016 – 9,873,128	- - - - - - - - -	4721	9,873,016 – 9,873,128	+	5	120	62.93	-1.79	0.45	0.803222
2855	2R_DroMel_CAF1	9,873,016 – 9,873,128	- - - - - - - - -	4722	9,873,016 – 9,873,128	-	5	120	62.93	-1.98	0.48	0.943337
2856	2R_DroMel_CAF1	9,873,202 – 9,873,300	- - - - - - - - -	4723	9,873,202 – 9,873,300	+	5	107	76.26	-2.23	0.62	0.980601
2856	2R_DroMel_CAF1	9,873,202 – 9,873,300	- - - - - - - - -	4724	9,873,202 – 9,873,300	-	5	107	76.26	-2.48	0.79	0.996873
2857	2R_DroMel_CAF1	9,873,303 – 9,873,420	- - - - - - - - -	4725	9,873,303 – 9,873,420	-	4	120	87.48	-1.39	0.71	0.500000
2858	2R_DroMel_CAF1	9,873,510 – 9,873,661	- - - - - - - - -	4726	9,873,510 – 9,873,621	-	4	120	72.83	-2.69	0.46	0.975836
				4727	9,873,549 – 9,873,661	+	4	120	73.96	-2.77	0.46	0.969472
				4728	9,873,549 – 9,873,661	-	4	120	73.96	-3.07	0.49	0.996760
2859	2R_DroMel_CAF1	9,873,954 – 9,874,059	- - - - - - - - -	4729	9,873,954 – 9,874,059	-	5	116	78.30	-1.42	0.71	0.572462
2860	2R_DroMel_CAF1	9,874,685 – 9,874,845	- - - "knownCDS=Parent=FBtr0087560;Name=CG12505-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12505-RA" - - - - -	4730	9,874,685 – 9,874,805	-	5	120	89.25	-1.51	0.77	0.585152
				4731	9,874,725 – 9,874,845	+	5	120	86.75	-2.26	0.72	0.861502
				4732	9,874,725 – 9,874,845	-	5	120	86.75	-2.69	0.79	0.990026
2861	2R_DroMel_CAF1	9,877,994 – 9,878,085	- - - - - - - - -	4733	9,877,994 – 9,878,085	-	5	91	92.53	-1.71	0.86	0.947927
2862	2R_DroMel_CAF1	9,878,395 – 9,878,494	- - - - - - - - -	4734	9,878,395 – 9,878,494	-	6	103	81.93	-1.33	0.72	0.535146
2863	2R_DroMel_CAF1	9,880,080 – 9,880,181	- - - "knownCDS=Parent=FBtr0087548, FBtr0087549, FBtr0087550;Name=Tfb1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8151-RB, FlyBase+Annotation+IDs:CG8151-RC, FlyBase+Annotation+IDs:CG8151-RA" - - - - -	4735	9,880,080 – 9,880,181	-	6	104	79.13	-1.82	0.61	0.772225
2864	2R_DroMel_CAF1	9,888,839 – 9,888,985	- - - - - - - - -	4736	9,888,839 – 9,888,945	-	6	113	76.41	-1.63	0.63	0.857875
2864	2R_DroMel_CAF1	9,888,839 – 9,888,985	- - - - - - - - -	4737	9,888,865 – 9,888,985	-	6	120	74.08	-1.80	0.44	0.524614
2865	2R_DroMel_CAF1	9,891,045 – 9,891,165	- - - "knownCDS=Parent=FBtr0087555;Name=CG30075-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30075-RA" - - - - -	4738	9,891,045 – 9,891,165	+	5	120	75.25	-1.74	0.46	0.505007
2866	2R_DroMel_CAF1	9,906,662 – 9,906,822	- - - "knownCDS=Parent=FBtr0087486;Name=CG10104-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10104-RA" - - - - -	4739	9,906,662 – 9,906,782	+	6	120	81.50	-1.79	0.61	0.558215
2866	2R_DroMel_CAF1	9,906,662 – 9,906,822		4740	9,906,702 – 9,906,822	-	6	120	76.72	-1.87	0.57	0.839299
2867	2R_DroMel_CAF1	9,916,752 – 9,916,852	- - - - - - - - -	4741	9,916,752 – 9,916,852	+	5	102	94.53	-2.26	0.76	0.762896
2868	2R_DroMel_CAF1	9,917,657 – 9,917,760	- - - - - - - - -	4742	9,917,657 – 9,917,760	+	5	103	89.61	-1.71	0.87	0.936193
2868	2R_DroMel_CAF1	9,917,657 – 9,917,760	- - - - - - - - -	4743	9,917,657 – 9,917,760	-	5	103	89.61	-2.00	0.92	0.995473
2869	2R_DroMel_CAF1	9,920,704 – 9,920,803	- - - - - - - - -	4744	9,920,704 – 9,920,803	+	5	117	84.54	-1.71	0.71	0.607267
2870	2R_DroMel_CAF1	9,922,463 – 9,922,568	- - - - - - - - -	4745	9,922,463 – 9,922,568	+	6	111	79.02	-1.37	0.67	0.679627
2871	2R_DroMel_CAF1	9,924,058 – 9,924,166	- - - - - - - - -	4746	9,924,058 – 9,924,166	-	6	108	94.20	-1.72	0.84	0.586272
2872	2R_DroMel_CAF1	9,932,862 – 9,932,954	- - - - - - - - -	4747	9,932,862 – 9,932,954	-	5	111	72.32	-1.48	0.65	0.782313
2873	2R_DroMel_CAF1	9,934,111 – 9,934,208	- - "RNAmicro=f:9934111_t:9934220_strand:-_p:0.988936" - - - - - -	4748	9,934,111 – 9,934,208	+	5	110	84.58	-4.25	0.67	0.996127
2873	2R_DroMel_CAF1	9,934,111 – 9,934,208		4749	9,934,111 – 9,934,208	-	5	110	84.58	-3.21	0.76	0.996258
2874	2R_DroMel_CAF1	9,935,109 – 9,935,210	- - - - - - - - -	4750	9,935,109 – 9,935,210	+	6	104	95.84	-1.57	0.95	0.992079
2875	2R_DroMel_CAF1	9,935,514 – 9,935,609	- - - - - - - - -	4751	9,935,514 – 9,935,609	+	5	113	81.26	-2.79	0.57	0.973824
2875	2R_DroMel_CAF1	9,935,514 – 9,935,609	- - - - - - - - -	4752	9,935,514 – 9,935,609	-	5	113	81.26	-2.64	0.53	0.940575
2876	2R_DroMel_CAF1	9,938,055 – 9,938,157	- - - "knownCDS=Parent=FBtr0087488;Name=CG17386-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17386-RA" - - - - -	4753	9,938,055 – 9,938,157	+	6	120	79.26	-1.00	0.72	0.500000
2877	2R_DroMel_CAF1	9,940,561 – 9,940,651	- - - - - - - - -	4754	9,940,561 – 9,940,651	+	3	100	80.84	-2.65	0.64	0.960854
2878	2R_DroMel_CAF1	9,952,707 – 9,952,867	- - - - - - - - -	4755	9,952,707 – 9,952,805	-	5	111	81.55	-1.68	0.73	0.686281
2878	2R_DroMel_CAF1	9,952,707 – 9,952,867	- - - - - - - - -	4756	9,952,774 – 9,952,867	-	3	101	85.08	-3.77	0.69	0.967609
2879	2R_DroMel_CAF1	9,953,559 – 9,953,649	- - - - - - - - -	4757	9,953,559 – 9,953,649	+	6	90	89.04	-1.89	0.81	0.506261
2880	2R_DroMel_CAF1	9,954,570 – 9,954,662	- - - - - - - - -	4758	9,954,570 – 9,954,662	+	6	116	75.43	-1.66	0.62	0.870861
2881	2R_DroMel_CAF1	9,959,638 – 9,959,733	- - - - - - - - -	4759	9,959,638 – 9,959,733	-	3	95	100.00	-2.15	1.00	0.935278
2882	2R_DroMel_CAF1	9,963,167 – 9,963,259	- - - - - - - - -	4760	9,963,167 – 9,963,259	+	5	104	73.73	-2.12	0.30	0.956682
2883	2R_DroMel_CAF1	9,971,179 – 9,971,274	- - - - - - - - -	4761	9,971,179 – 9,971,274	-	6	98	80.19	-1.71	0.66	0.757399
2884	2R_DroMel_CAF1	9,978,022 – 9,978,139	- - - "knownCDS=Parent=FBtr0087491;Name=CG17390-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17390-RA" - - - - -	4762	9,978,022 – 9,978,139	+	6	120	78.76	-2.16	0.46	0.570137
2885	2R_DroMel_CAF1	9,978,300 – 9,978,405	- - - "knownCDS=Parent=FBtr0087491;Name=CG17390-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17390-RA" - - - - -	4763	9,978,300 – 9,978,405	+	6	111	76.95	-1.17	0.68	0.633180
2886	2R_DroMel_CAF1	9,980,258 – 9,980,386	- - - - - - - - -	4764	9,980,258 – 9,980,364	-	5	106	90.57	-1.68	0.84	0.898652
2886	2R_DroMel_CAF1	9,980,258 – 9,980,386	- - - - - - - - -	4765	9,980,290 – 9,980,386	-	4	96	92.71	-1.72	0.88	0.812873
2887	2R_DroMel_CAF1	9,996,137 – 9,996,254	- - - - - - - - -	4766	9,996,137 – 9,996,254	+	5	117	94.53	-1.94	0.85	0.976058
2888	2R_DroMel_CAF1	9,996,743 – 9,996,846	- - - - - - - - -	4767	9,996,743 – 9,996,846	+	5	103	95.92	-1.36	0.96	0.927875
2889	2R_DroMel_CAF1	9,997,153 – 9,997,286	- - - - - - - - -	4768	9,997,153 – 9,997,246	+	4	111	82.10	-2.80	0.57	0.933699
				4769	9,997,153 – 9,997,246	-	4	111	82.10	-3.00	0.62	0.983638
				4770	9,997,184 – 9,997,286	+	5	112	86.26	-1.92	0.73	0.748081
				4771	9,997,184 – 9,997,286	-	5	112	86.26	-2.42	0.72	0.917646
2890	2R_DroMel_CAF1	9,997,452 – 9,997,547	- - - - - - - - -	4772	9,997,452 – 9,997,547	+	5	95	93.37	-2.17	0.94	0.999606
2890	2R_DroMel_CAF1	9,997,452 – 9,997,547	- - - - - - - - -	4773	9,997,452 – 9,997,547	-	5	95	93.37	-1.20	0.91	0.696004
2891	2R_DroMel_CAF1	9,997,717 – 9,997,819	- - - - - - - - -	4774	9,997,717 – 9,997,819	-	5	102	96.57	-1.35	0.88	0.685799
2892	2R_DroMel_CAF1	9,999,063 – 9,999,170	- - - - - - - - -	4775	9,999,063 – 9,999,170	-	4	107	80.59	-1.52	0.77	0.600419
2893	2R_DroMel_CAF1	9,999,700 – 9,999,792	- - - - - - - - -	4776	9,999,700 – 9,999,792	+	5	106	76.48	-2.22	0.51	0.949937
2894	2R_DroMel_CAF1	10,000,116 – 10,000,213	- - - - - - - - -	4777	10,000,116 – 10,000,213	+	4	103	88.78	-1.46	0.72	0.511712
2895	2R_DroMel_CAF1	10,002,391 – 10,002,504	- - - - - - - - -	4778	10,002,391 – 10,002,504	-	4	115	76.31	-1.54	0.65	0.523382
2896	2R_DroMel_CAF1	10,002,528 – 10,002,629	- - - - - - - - -	4779	10,002,528 – 10,002,629	+	5	101	79.91	-3.69	0.66	0.999307
2896	2R_DroMel_CAF1	10,002,528 – 10,002,629	- - - - - - - - -	4780	10,002,528 – 10,002,629	-	5	101	79.91	-2.63	0.78	0.993378
2897	2R_DroMel_CAF1	10,006,933 – 10,007,048	- - - - - - - - -	4781	10,006,933 – 10,007,048	+	5	120	78.63	-2.09	0.36	0.724679
2898	2R_DroMel_CAF1	10,007,344 – 10,007,437	- - - - - - - - -	4782	10,007,344 – 10,007,437	-	5	117	76.24	-0.86	0.83	0.702285
2899	2R_DroMel_CAF1	10,008,404 – 10,008,539	- - - - - - - - -	4783	10,008,404 – 10,008,499	+	6	114	80.43	-1.81	0.61	0.671381
				4784	10,008,404 – 10,008,499	-	6	114	80.43	-1.37	0.77	0.711486
				4785	10,008,442 – 10,008,539	-	6	114	84.50	-1.78	0.82	0.666130
2900	2R_DroMel_CAF1	10,021,404 – 10,021,500	- - - "knownCDS=Parent=FBtr0087493, FBtr0100154;Name=Asx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8787-RA, FlyBase+Annotation+IDs:CG8787-RB" - - - - -	4786	10,021,404 – 10,021,500	+	5	96	97.92	-1.44	0.94	0.892462
2901	2R_DroMel_CAF1	10,021,863 – 10,021,963	- - - "knownCDS=Parent=FBtr0087493, FBtr0100154;Name=Asx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8787-RA, FlyBase+Annotation+IDs:CG8787-RB" - - - - -	4787	10,021,863 – 10,021,963	-	6	109	78.90	-1.86	0.61	0.821044
2902	2R_DroMel_CAF1	10,026,516 – 10,026,621	- - - - - - - - -	4788	10,026,516 – 10,026,621	+	6	111	81.39	-1.55	0.80	0.742721
2902	2R_DroMel_CAF1	10,026,516 – 10,026,621	- - - - - - - - -	4789	10,026,516 – 10,026,621	-	6	111	81.39	-2.23	0.80	0.907779
2903	2R_DroMel_CAF1	10,029,282 – 10,029,392	- - - - - - - - -	4790	10,029,282 – 10,029,392	+	3	117	87.36	-2.00	0.76	0.579383
2904	2R_DroMel_CAF1	10,034,001 – 10,034,118	- - - - - - - - -	4791	10,034,001 – 10,034,118	-	5	118	93.82	-2.50	0.84	0.997113
2905	2R_DroMel_CAF1	10,034,329 – 10,034,438	- - - - - - - - -	4792	10,034,329 – 10,034,438	+	5	119	90.80	-1.75	0.74	0.574970
2906	2R_DroMel_CAF1	10,036,009 – 10,036,124	- - - - - - - - -	4793	10,036,009 – 10,036,124	+	6	120	84.97	-2.06	0.74	0.557925
2907	2R_DroMel_CAF1	10,037,219 – 10,037,311	- - - - - - - - -	4794	10,037,219 – 10,037,311	-	5	109	84.76	-2.16	0.71	0.858333
2908	2R_DroMel_CAF1	10,037,429 – 10,037,521	- - - - - - - - -	4795	10,037,429 – 10,037,521	+	6	95	79.89	-2.44	0.64	0.932402
2909	2R_DroMel_CAF1	10,041,643 – 10,041,755	- - - - - - - - -	4796	10,041,643 – 10,041,755	+	5	112	97.86	-1.16	0.96	0.598176
2910	2R_DroMel_CAF1	10,114,771 – 10,114,891	- - - "knownCDS=Parent=FBtr0087511;Name=RpI1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10122-RA" - - - - -	4797	10,114,771 – 10,114,891	-	6	120	77.83	-1.93	0.50	0.608954
2911	2R_DroMel_CAF1	10,115,513 – 10,115,716	- - - - - - - - -	4798	10,115,513 – 10,115,606	+	6	102	79.92	-1.48	0.61	0.527501
2911	2R_DroMel_CAF1	10,115,513 – 10,115,716	- - - - - - - - -	4799	10,115,606 – 10,115,716	-	6	111	77.53	-2.20	0.66	0.965764
2912	2R_DroMel_CAF1	10,120,808 – 10,120,968	- - - "knownCDS=Parent=FBtr0087504;Name=CG33469-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33469-RA" - - - - -	4800	10,120,808 – 10,120,928	-	6	120	77.33	-2.79	0.44	0.963724
2912	2R_DroMel_CAF1	10,120,808 – 10,120,968		4801	10,120,848 – 10,120,968	-	6	120	77.06	-1.98	0.51	0.752668
2913	2R_DroMel_CAF1	10,123,468 – 10,123,582	- - - "knownCDS=Parent=FBtr0087501, FBtr0087502;Name=Su(var)2-HP2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12864-RA, FlyBase+Annotation+IDs:CG12864-RB" - - - - -	4802	10,123,468 – 10,123,582	+	5	120	78.43	-1.78	0.68	0.821743
2913	2R_DroMel_CAF1	10,123,468 – 10,123,582		4803	10,123,468 – 10,123,582	-	5	120	78.43	-1.96	0.70	0.929129
2914	2R_DroMel_CAF1	10,129,452 – 10,129,568	- - - "knownCDS=Parent=FBtr0087501;Name=Su(var)2-HP2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12864-RA" - - - - -	4804	10,129,452 – 10,129,568	+	5	116	90.69	-1.47	0.88	0.848925
2915	2R_DroMel_CAF1	10,130,131 – 10,130,240	- - - "knownCDS=Parent=FBtr0087501;Name=Su(var)2-HP2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12864-RA" - - - - -	4805	10,130,131 – 10,130,240	-	6	120	82.96	-1.82	0.69	0.605233
2916	2R_DroMel_CAF1	10,131,093 – 10,131,213	- - - "knownCDS=Parent=FBtr0087501;Name=Su(var)2-HP2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12864-RA" - - - - -	4806	10,131,093 – 10,131,213	-	3	120	89.44	-2.19	0.78	0.615351
2917	2R_DroMel_CAF1	10,131,253 – 10,131,410	- - - - - - - - -	4807	10,131,253 – 10,131,373	+	3	120	96.67	-3.51	0.89	0.955570
				4808	10,131,253 – 10,131,373	-	3	120	96.67	-1.62	0.96	0.636945
				4809	10,131,293 – 10,131,410	+	3	117	94.30	-2.54	0.81	0.699396
				4810	10,131,293 – 10,131,410	-	3	117	94.30	-1.83	0.89	0.600262
2918	2R_DroMel_CAF1	10,132,451 – 10,132,553	- - - "knownCDS=Parent=FBtr0087501, FBtr0087502;Name=Su(var)2-HP2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12864-RA, FlyBase+Annotation+IDs:CG12864-RB" - - - - -	4811	10,132,451 – 10,132,553	+	6	120	77.60	-1.75	0.72	0.934139
2918	2R_DroMel_CAF1	10,132,451 – 10,132,553		4812	10,132,451 – 10,132,553	-	6	120	77.60	-1.47	0.70	0.843678
2919	2R_DroMel_CAF1	10,134,716 – 10,134,817	- - - "knownCDS=Parent=FBtr0087500;Name=CG12863-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12863-RA" - - - - -	4813	10,134,716 – 10,134,817	+	6	103	81.64	-1.72	0.79	0.785375
2920	2R_DroMel_CAF1	10,136,468 – 10,136,570	- - - - - - - - -	4814	10,136,468 – 10,136,570	-	4	104	83.25	-1.58	0.71	0.587327
2921	2R_DroMel_CAF1	10,136,643 – 10,136,796	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002414; Name=Me18S-Cm1366;Dbxref=FB:FBgn0082951, GB:AJ784328" - "RNAmicro=f:10136643_t:10136762_strand:+_p:0.893626" - - - - - -	4815	10,136,643 – 10,136,759	+	6	120	88.64	-4.01	0.93	0.999647
2921	2R_DroMel_CAF1	10,136,643 – 10,136,796		4816	10,136,679 – 10,136,796	+	6	120	84.40	-2.63	0.72	0.708824
2922	2R_DroMel_CAF1	10,139,551 – 10,139,671	- - - - - - - - -	4817	10,139,551 – 10,139,671	+	5	120	88.29	-1.74	0.71	0.536967
2923	2R_DroMel_CAF1	10,140,697 – 10,140,812	- - - - - - - - -	4818	10,140,697 – 10,140,812	-	4	120	91.81	-2.15	0.88	0.953156
2924	2R_DroMel_CAF1	10,141,094 – 10,141,276	- - - - - - - - -	4819	10,141,094 – 10,141,206	+	3	119	89.71	-1.87	0.93	0.871588
				4820	10,141,127 – 10,141,236	+	3	109	95.11	-2.52	0.90	0.908031
				4821	10,141,167 – 10,141,276	+	3	109	93.27	-2.99	0.92	0.978584
2925	2R_DroMel_CAF1	10,146,716 – 10,146,841	- - - - - - - - -	4822	10,146,716 – 10,146,816	-	5	118	77.50	-2.11	0.78	0.982919
2925	2R_DroMel_CAF1	10,146,716 – 10,146,841	- - - - - - - - -	4823	10,146,738 – 10,146,841	-	6	103	86.02	-1.99	0.84	0.795087
2926	2R_DroMel_CAF1	10,149,265 – 10,149,369	- - - - - - - - -	4824	10,149,265 – 10,149,369	-	6	120	76.94	-2.56	0.36	0.795483
2927	2R_DroMel_CAF1	10,151,126 – 10,151,256	- - - - - - - - -	4825	10,151,126 – 10,151,224	+	6	114	65.85	-1.59	0.44	0.685093
				4826	10,151,126 – 10,151,224	-	6	114	65.85	-1.69	0.46	0.827730
				4827	10,151,152 – 10,151,256	-	6	112	77.63	-1.68	0.58	0.688195
2928	2R_DroMel_CAF1	10,151,406 – 10,151,501	- - - - - - - - -	4828	10,151,406 – 10,151,501	+	5	114	76.29	-2.41	0.62	0.991444
2929	2R_DroMel_CAF1	10,152,065 – 10,152,175	- - - - - - - - -	4829	10,152,065 – 10,152,175	-	5	110	93.36	-1.55	0.80	0.670170
2930	2R_DroMel_CAF1	10,152,664 – 10,152,774	- - - - - - - - -	4830	10,152,664 – 10,152,774	+	6	116	72.53	-2.01	0.57	0.969969
2931	2R_DroMel_CAF1	10,159,614 – 10,159,746	- - - - - - - - -	4831	10,159,614 – 10,159,726	+	4	115	71.45	-3.80	0.74	0.999993
				4832	10,159,614 – 10,159,726	-	4	115	71.45	-3.34	0.64	0.999983
				4833	10,159,648 – 10,159,746	+	4	120	76.34	-2.63	0.71	0.998893
2932	2R_DroMel_CAF1	10,161,400 – 10,161,745	- - - - - - - - -	4834	10,161,400 – 10,161,507	-	5	110	86.43	-1.70	0.71	0.566036
				4835	10,161,507 – 10,161,625	-	5	118	95.40	-1.53	0.91	0.947221
				4836	10,161,585 – 10,161,705	+	5	120	97.67	-2.12	0.87	0.977485
				4837	10,161,585 – 10,161,705	-	5	120	97.67	-2.04	0.82	0.866653
				4838	10,161,625 – 10,161,745	+	5	120	98.17	-1.93	0.97	0.995623
				4839	10,161,625 – 10,161,745	-	5	120	98.17	-2.22	1.00	0.999369
2933	2R_DroMel_CAF1	10,161,886 – 10,162,003	- - - - - - - - -	4840	10,161,886 – 10,162,003	+	5	120	84.94	-1.85	0.66	0.598270
2933	2R_DroMel_CAF1	10,161,886 – 10,162,003	- - - - - - - - -	4841	10,161,886 – 10,162,003	-	5	120	84.94	-1.86	0.71	0.708293
2934	2R_DroMel_CAF1	10,163,462 – 10,163,582	- - - - - - - - -	4842	10,163,462 – 10,163,582	+	5	120	98.50	-3.43	0.97	0.999894
2935	2R_DroMel_CAF1	10,163,622 – 10,163,740	- - - - - - - - -	4843	10,163,622 – 10,163,740	+	5	120	89.30	-2.77	0.65	0.589935
2936	2R_DroMel_CAF1	10,164,505 – 10,164,625	- - - - - - - - -	4844	10,164,505 – 10,164,625	+	4	120	93.39	-1.47	0.87	0.575804
2937	2R_DroMel_CAF1	10,165,541 – 10,165,701	- - - - - - - - -	4845	10,165,541 – 10,165,661	-	5	120	90.60	-1.35	0.81	0.528963
2937	2R_DroMel_CAF1	10,165,541 – 10,165,701	- - - - - - - - -	4846	10,165,581 – 10,165,701	-	5	120	95.83	-1.22	0.92	0.707905
2938	2R_DroMel_CAF1	10,165,773 – 10,165,893	- - - - - - - - -	4847	10,165,773 – 10,165,893	+	5	120	97.83	-1.65	0.90	0.918872
2939	2R_DroMel_CAF1	10,166,225 – 10,166,345	- - - - - - - - -	4848	10,166,225 – 10,166,345	+	5	120	90.58	-2.21	0.82	0.984510
2940	2R_DroMel_CAF1	10,166,982 – 10,167,102	- - - - - - - - -	4849	10,166,982 – 10,167,102	+	5	120	98.50	-1.61	0.95	0.947878
2941	2R_DroMel_CAF1	10,167,602 – 10,167,827	- - - - - - - - -	4850	10,167,602 – 10,167,707	+	5	120	81.70	-2.04	0.72	0.887117
				4851	10,167,682 – 10,167,787	-	4	105	85.87	-1.54	0.86	0.677025
				4852	10,167,707 – 10,167,827	-	5	120	94.58	-1.71	0.88	0.970256
2942	2R_DroMel_CAF1	10,168,237 – 10,168,375	- - - - - - - - -	4853	10,168,237 – 10,168,357	+	5	120	99.33	-1.49	0.98	0.885788
				4854	10,168,237 – 10,168,357	-	5	120	99.33	-2.50	1.01	0.999435
				4855	10,168,277 – 10,168,375	-	5	120	88.89	-1.41	0.85	0.650495
2943	2R_DroMel_CAF1	10,169,321 – 10,169,445	- - - - - - - - -	4856	10,169,321 – 10,169,413	-	4	100	78.03	-1.79	0.59	0.563382
				4857	10,169,340 – 10,169,445	+	5	120	74.20	-1.79	0.25	0.779814
				4858	10,169,340 – 10,169,445	-	5	120	74.20	-2.20	0.37	0.966025
2944	2R_DroMel_CAF1	10,169,891 – 10,170,166	- - - - - - - - -	4859	10,169,891 – 10,170,006	+	5	120	91.38	-1.48	0.80	0.642408
				4860	10,169,928 – 10,170,046	+	5	120	88.15	-2.00	0.72	0.730086
				4861	10,169,928 – 10,170,046	-	5	120	88.15	-1.65	0.72	0.547982
				4862	10,170,006 – 10,170,126	+	4	120	99.58	-2.68	1.00	0.918515
				4863	10,170,006 – 10,170,126	-	4	120	99.58	-3.07	1.00	0.938609
				4864	10,170,046 – 10,170,166	-	4	120	98.75	-1.77	0.98	0.644484
2945	2R_DroMel_CAF1	10,170,796 – 10,170,901	- - - - - - - - -	4865	10,170,796 – 10,170,901	+	4	120	91.41	-1.40	0.84	0.517224
2946	2R_DroMel_CAF1	10,173,437 – 10,173,548	- - - "knownCDS=Parent=FBtr0087482;Name=Adgf-E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10143-RA" - - - - -	4866	10,173,437 – 10,173,548	-	6	113	71.46	-1.59	0.48	0.555657
2947	2R_DroMel_CAF1	10,173,880 – 10,173,978	- - - - - - - - -	4867	10,173,880 – 10,173,978	-	5	98	96.94	-1.58	0.93	0.963714
2948	2R_DroMel_CAF1	10,182,193 – 10,182,288	- - - - - - - - -	4868	10,182,193 – 10,182,288	+	6	120	83.35	-1.69	0.69	0.512653
2949	2R_DroMel_CAF1	10,182,604 – 10,182,701	- - - - - - - - -	4869	10,182,604 – 10,182,701	-	5	98	88.49	-2.02	0.80	0.936418
2950	2R_DroMel_CAF1	10,183,477 – 10,183,568	- - - "knownCDS=Parent=FBtr0087434;Name=CG12866-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12866-RA" - - - - -	4870	10,183,477 – 10,183,568	+	5	100	85.31	-1.91	0.67	0.638204
2951	2R_DroMel_CAF1	10,184,424 – 10,184,573	- - - "knownCDS=Parent=FBtr0087434;Name=CG12866-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12866-RA" - - - - -	4871	10,184,424 – 10,184,533	+	6	119	75.80	-1.26	0.68	0.771701
2951	2R_DroMel_CAF1	10,184,424 – 10,184,573		4872	10,184,453 – 10,184,573	+	6	120	74.67	-2.33	0.63	0.988834
2952	2R_DroMel_CAF1	10,185,064 – 10,185,180	- - - "knownCDS=Parent=FBtr0087434;Name=CG12866-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12866-RA" - - - - -	4873	10,185,064 – 10,185,180	+	6	119	81.82	-1.44	0.69	0.557397
2953	2R_DroMel_CAF1	10,189,616 – 10,189,818	- - "RNAmicro=f:10189676_t:10189789_strand:+_p:0.778558" "knownCDS=Parent=FBtr0087479;Name=CG30479-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30479-RA" - - - - -	4874	10,189,616 – 10,189,716	-	6	100	85.06	-2.15	0.83	0.821983
				4875	10,189,647 – 10,189,750	+	6	109	78.48	-2.04	0.49	0.621523
				4876	10,189,647 – 10,189,750	-	6	109	78.48	-1.39	0.61	0.509139
				4877	10,189,676 – 10,189,790	+	6	114	81.46	-2.22	0.67	0.826075
				4878	10,189,676 – 10,189,790	-	6	114	81.46	-1.96	0.67	0.764369
				4879	10,189,716 – 10,189,818	-	6	114	81.47	-2.07	0.65	0.772640
2954	2R_DroMel_CAF1	10,191,284 – 10,191,388	- - - "knownCDS=Parent=FBtr0087478;Name=CG30480-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30480-RA" - - - - -	4880	10,191,284 – 10,191,388	+	6	107	78.03	-1.93	0.57	0.817299
2955	2R_DroMel_CAF1	10,198,119 – 10,198,237	- - - - - - - - -	4881	10,198,119 – 10,198,219	-	3	102	95.39	-2.15	0.94	0.894545
				4882	10,198,147 – 10,198,237	+	4	92	86.81	-1.56	0.85	0.685672
				4883	10,198,147 – 10,198,237	-	4	92	86.81	-3.59	0.83	0.996149
2956	2R_DroMel_CAF1	10,200,073 – 10,200,174	- - - - - - - - -	4884	10,200,073 – 10,200,174	-	5	117	79.35	-1.87	0.66	0.819411
2957	2R_DroMel_CAF1	10,200,958 – 10,201,112	- - - - - - - - -	4885	10,200,958 – 10,201,072	+	5	114	95.43	-1.47	0.92	0.937809
2957	2R_DroMel_CAF1	10,200,958 – 10,201,112	- - - - - - - - -	4886	10,200,996 – 10,201,112	+	5	116	93.97	-2.74	0.87	0.999510
2958	2R_DroMel_CAF1	10,201,473 – 10,201,633	- - - - - - - - -	4887	10,201,473 – 10,201,571	+	6	102	74.58	-2.13	0.48	0.915584
				4888	10,201,512 – 10,201,611	+	6	108	79.09	-2.02	0.56	0.779057
				4889	10,201,543 – 10,201,633	+	6	97	79.53	-1.51	0.69	0.758139
				4890	10,201,543 – 10,201,633	-	6	97	79.53	-2.11	0.59	0.845239
2959	2R_DroMel_CAF1	10,205,012 – 10,205,142	- - - - - - - - -	4891	10,205,012 – 10,205,122	-	6	118	80.30	-2.05	0.60	0.781903
				4892	10,205,046 – 10,205,142	+	5	97	89.14	-2.46	0.72	0.877587
				4893	10,205,046 – 10,205,142	-	5	97	89.14	-2.56	0.69	0.775139
2960	2R_DroMel_CAF1	10,206,999 – 10,207,102	- - - - - - - - -	4894	10,206,999 – 10,207,102	-	6	117	81.53	-1.70	0.69	0.692111
2961	2R_DroMel_CAF1	10,212,330 – 10,212,449	- - - - - - - - -	4895	10,212,330 – 10,212,424	+	6	98	77.79	-2.51	0.61	0.974405
				4896	10,212,330 – 10,212,424	-	6	98	77.79	-1.29	0.84	0.853336
				4897	10,212,354 – 10,212,449	+	6	110	76.30	-2.11	0.57	0.940160
				4898	10,212,354 – 10,212,449	-	6	110	76.30	-2.03	0.63	0.955900
2962	2R_DroMel_CAF1	10,221,767 – 10,221,896	- - - - - - - - -	4899	10,221,767 – 10,221,857	-	6	92	87.24	-2.15	0.78	0.554108
				4900	10,221,784 – 10,221,896	+	6	115	85.04	-2.91	0.70	0.651213
				4901	10,221,784 – 10,221,896	-	6	115	85.04	-2.78	0.78	0.851375
2963	2R_DroMel_CAF1	10,224,368 – 10,224,465	- - - - - - - - -	4902	10,224,368 – 10,224,465	+	5	116	76.63	-2.94	0.59	0.998876
2964	2R_DroMel_CAF1	10,225,764 – 10,225,870	- - - - - - - - -	4903	10,225,764 – 10,225,870	-	6	114	82.10	-1.28	0.73	0.508282
2965	2R_DroMel_CAF1	10,226,381 – 10,226,482	- - - - - - - - -	4904	10,226,381 – 10,226,482	+	6	101	95.18	-1.87	0.86	0.890758
2966	2R_DroMel_CAF1	10,229,181 – 10,229,281	- - - - - - - - -	4905	10,229,181 – 10,229,281	+	5	101	95.42	-1.05	0.98	0.613898
2966	2R_DroMel_CAF1	10,229,181 – 10,229,281	- - - - - - - - -	4906	10,229,181 – 10,229,281	-	5	101	95.42	-1.42	0.92	0.925382
2967	2R_DroMel_CAF1	10,229,665 – 10,229,793	- - - - - - - - -	4907	10,229,665 – 10,229,759	+	6	102	77.21	-2.34	0.73	0.979862
2967	2R_DroMel_CAF1	10,229,665 – 10,229,793	- - - - - - - - -	4908	10,229,697 – 10,229,793	+	6	102	70.66	-1.28	0.68	0.891119
2968	2R_DroMel_CAF1	10,232,900 – 10,233,000	- - - - - - - - -	4909	10,232,900 – 10,233,000	+	6	101	75.39	-2.72	0.44	0.984905
2969	2R_DroMel_CAF1	10,241,010 – 10,241,117	- - - - - - - - -	4910	10,241,010 – 10,241,117	+	5	116	75.66	-2.04	0.26	0.912197
2969	2R_DroMel_CAF1	10,241,010 – 10,241,117	- - - - - - - - -	4911	10,241,010 – 10,241,117	-	5	116	75.66	-2.96	0.13	0.997294
2970	2R_DroMel_CAF1	10,245,264 – 10,245,357	- - - "knownCDS=texon1373;Parent=CG_NCBI_GNO_32392888, CG_DGIL_SNO_28356328" - - - - -	4912	10,245,264 – 10,245,357	+	5	101	72.42	-1.89	0.62	0.957310
2971	2R_DroMel_CAF1	10,245,587 – 10,245,687	- - - - - - - - -	4913	10,245,587 – 10,245,687	+	6	120	75.44	-1.54	0.60	0.750270
2972	2R_DroMel_CAF1	10,247,863 – 10,247,961	- - - - - - - - -	4914	10,247,863 – 10,247,961	+	6	112	78.61	-1.39	0.61	0.518357
2973	2R_DroMel_CAF1	10,255,307 – 10,255,426	- - - - - - - - -	4915	10,255,307 – 10,255,426	-	6	120	90.95	-1.85	0.84	0.685037
2974	2R_DroMel_CAF1	10,260,652 – 10,260,755	- - - - - - - - -	4916	10,260,652 – 10,260,755	+	6	111	81.51	-2.09	0.66	0.789718
2974	2R_DroMel_CAF1	10,260,652 – 10,260,755	- - - - - - - - -	4917	10,260,652 – 10,260,755	-	6	111	81.51	-1.69	0.64	0.603544
2975	2R_DroMel_CAF1	10,271,600 – 10,271,694	- - - - - - - - -	4918	10,271,600 – 10,271,694	-	6	94	80.41	-1.50	0.64	0.585409
2976	2R_DroMel_CAF1	10,272,675 – 10,272,768	- - - - - - - - -	4919	10,272,675 – 10,272,768	+	4	93	87.63	-2.28	0.67	0.765301
2977	2R_DroMel_CAF1	10,275,581 – 10,275,681	- - - - - - - - -	4920	10,275,581 – 10,275,681	-	6	107	78.22	-1.55	0.72	0.871370
2978	2R_DroMel_CAF1	10,277,681 – 10,277,773	- - - - - - - - -	4921	10,277,681 – 10,277,773	-	3	94	75.74	-2.29	0.67	0.995615
2979	2R_DroMel_CAF1	10,278,924 – 10,279,084	- - - "knownCDS=Parent=FBtr0087468;Name=Spred-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10155-RA" - - - - -	4922	10,278,924 – 10,279,044	-	6	120	90.28	-2.44	0.96	0.999510
2979	2R_DroMel_CAF1	10,278,924 – 10,279,084		4923	10,278,964 – 10,279,084	-	6	120	90.22	-2.58	0.94	0.999097
2980	2R_DroMel_CAF1	10,279,939 – 10,280,031	- - - - - - - - -	4924	10,279,939 – 10,280,031	+	4	95	93.67	-2.13	0.93	0.965500
2980	2R_DroMel_CAF1	10,279,939 – 10,280,031	- - - - - - - - -	4925	10,279,939 – 10,280,031	-	4	95	93.67	-1.98	0.88	0.893327
2981	2R_DroMel_CAF1	10,285,300 – 10,285,419	- - - - - - - - -	4926	10,285,300 – 10,285,419	-	5	120	88.24	-1.80	0.70	0.539500
2982	2R_DroMel_CAF1	10,285,693 – 10,285,784	- - - - - - - - -	4927	10,285,693 – 10,285,784	+	5	91	99.56	-1.59	0.98	0.927842
2982	2R_DroMel_CAF1	10,285,693 – 10,285,784	- - - - - - - - -	4928	10,285,693 – 10,285,784	-	5	91	99.56	-2.34	1.00	0.998697
2983	2R_DroMel_CAF1	10,286,246 – 10,286,361	- - - "knownCDS=Parent=FBtr0087442;Name=BEAF-32-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10159-RB" - - - - -	4929	10,286,246 – 10,286,361	+	6	116	81.43	-1.34	0.78	0.621704
2984	2R_DroMel_CAF1	10,288,746 – 10,288,887	- - - "knownCDS=Parent=FBtr0087465;Name=kn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10197-RA" - - - - -	4930	10,288,746 – 10,288,850	+	6	120	79.70	-1.72	0.62	0.713671
				4931	10,288,746 – 10,288,850	-	6	120	79.70	-2.36	0.64	0.930234
				4932	10,288,773 – 10,288,887	-	6	120	83.83	-1.39	0.84	0.515804
2985	2R_DroMel_CAF1	10,290,590 – 10,290,691	- - - "knownCDS=Parent=FBtr0087465;Name=kn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10197-RA" - - - - -	4933	10,290,590 – 10,290,691	+	6	111	83.12	-1.67	0.79	0.666432
2986	2R_DroMel_CAF1	10,290,956 – 10,291,063	- - - "knownCDS=Parent=FBtr0087465;Name=kn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10197-RA" - - - - -	4934	10,290,956 – 10,291,063	-	6	120	76.94	-1.45	0.65	0.781250
2987	2R_DroMel_CAF1	10,291,465 – 10,291,568	- - - - - - - - -	4935	10,291,465 – 10,291,568	-	5	103	94.24	-1.91	0.85	0.977518
2988	2R_DroMel_CAF1	10,300,454 – 10,300,546	- - - - - - - - -	4936	10,300,454 – 10,300,546	-	6	96	78.58	-1.20	0.81	0.764494
2989	2R_DroMel_CAF1	10,304,136 – 10,304,226	- - - - - - - - -	4937	10,304,136 – 10,304,226	-	6	92	86.39	-2.41	0.78	0.698759
2990	2R_DroMel_CAF1	10,307,396 – 10,307,486	- - - - - - - - -	4938	10,307,396 – 10,307,486	+	6	103	78.42	-1.57	0.60	0.643958
2990	2R_DroMel_CAF1	10,307,396 – 10,307,486	- - - - - - - - -	4939	10,307,396 – 10,307,486	-	6	103	78.42	-1.58	0.77	0.896431
2991	2R_DroMel_CAF1	10,308,615 – 10,308,725	- - - "knownCDS=Parent=FBtr0087465;Name=kn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10197-RA" - - - - -	4940	10,308,615 – 10,308,725	+	6	112	81.72	-1.32	0.70	0.534072
2992	2R_DroMel_CAF1	10,312,468 – 10,312,625	- - - - - - - - -	4941	10,312,468 – 10,312,585	-	5	117	91.97	-1.80	0.82	0.913113
2992	2R_DroMel_CAF1	10,312,468 – 10,312,625	- - - - - - - - -	4942	10,312,505 – 10,312,625	-	5	120	88.83	-1.94	0.78	0.869651
2993	2R_DroMel_CAF1	10,314,200 – 10,314,295	- - - - - - - - -	4943	10,314,200 – 10,314,295	+	6	112	81.57	-1.53	0.65	0.556258
2994	2R_DroMel_CAF1	10,325,027 – 10,325,118	- - - - - - - - -	4944	10,325,027 – 10,325,118	+	5	111	80.02	-1.77	0.56	0.500000
2995	2R_DroMel_CAF1	10,326,931 – 10,327,078	- - - - - - - - -	4945	10,326,931 – 10,327,038	+	4	107	89.56	-2.06	0.71	0.703920
				4946	10,326,931 – 10,327,038	-	4	107	89.56	-1.69	0.81	0.735838
				4947	10,326,967 – 10,327,078	+	4	111	83.93	-2.56	0.58	0.795015
2996	2R_DroMel_CAF1	10,330,178 – 10,330,271	- - - - - - - - -	4948	10,330,178 – 10,330,271	-	5	93	93.01	-1.57	0.83	0.836662
2997	2R_DroMel_CAF1	10,333,685 – 10,333,804	- - - "knownCDS=Parent=FBtr0087464;Name=CG10202-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10202-RA" - - - - -	4949	10,333,685 – 10,333,804	+	6	119	81.66	-2.16	0.73	0.854135
2998	2R_DroMel_CAF1	10,336,951 – 10,337,043	- - - - - - - - -	4950	10,336,951 – 10,337,043	+	5	92	97.61	-1.70	0.87	0.886748
2999	2R_DroMel_CAF1	10,341,121 – 10,341,219	- - - - - - - - -	4951	10,341,121 – 10,341,219	+	5	109	92.68	-1.93	0.90	0.995031
2999	2R_DroMel_CAF1	10,341,121 – 10,341,219	- - - - - - - - -	4952	10,341,121 – 10,341,219	-	5	109	92.68	-1.48	0.86	0.862656
3000	2R_DroMel_CAF1	10,346,893 – 10,346,987	- - - - - - - - -	4953	10,346,893 – 10,346,987	-	6	108	80.80	-1.27	0.72	0.595582
3001	2R_DroMel_CAF1	10,351,681 – 10,351,771	- - - - - - - - -	4954	10,351,681 – 10,351,771	+	6	90	83.45	-2.43	0.77	0.835326
3001	2R_DroMel_CAF1	10,351,681 – 10,351,771	- - - - - - - - -	4955	10,351,681 – 10,351,771	-	6	90	83.45	-2.67	0.82	0.929537
3002	2R_DroMel_CAF1	10,356,170 – 10,356,269	- - - - - - - - -	4956	10,356,170 – 10,356,269	+	6	102	80.86	-1.52	0.71	0.701789
3002	2R_DroMel_CAF1	10,356,170 – 10,356,269	- - - - - - - - -	4957	10,356,170 – 10,356,269	-	6	102	80.86	-1.51	0.63	0.540796
3003	2R_DroMel_CAF1	10,358,563 – 10,358,663	- - - "knownCDS=Parent=FBtr0087463;Name=NaPi-T-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10207-RA" - - - - -	4958	10,358,563 – 10,358,663	-	6	107	76.97	-1.42	0.66	0.770532
3004	2R_DroMel_CAF1	10,361,492 – 10,361,707	- - - "knownCDS=Parent=FBtr0087462;Name=CG10209-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10209-RA" - - - - -	4959	10,361,492 – 10,361,597	+	6	108	75.76	-1.94	0.53	0.844228
				4960	10,361,492 – 10,361,597	-	6	108	75.76	-1.88	0.48	0.652606
				4961	10,361,597 – 10,361,707	-	6	110	81.27	-1.83	0.58	0.500000
3005	2R_DroMel_CAF1	10,366,305 – 10,366,425	- - - "knownCDS=Parent=FBtr0087461;Name=SMC2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10212-RA" - - - - -	4962	10,366,305 – 10,366,425	-	6	120	72.56	-2.52	0.44	0.989187
3006	2R_DroMel_CAF1	10,368,594 – 10,368,695	- - - "knownCDS=Parent=FBtr0087448;Name=Ercc1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10215-RA" - - - - -	4963	10,368,594 – 10,368,695	-	6	101	84.16	-1.85	0.74	0.564843
3007	2R_DroMel_CAF1	10,376,826 – 10,376,921	- - - "knownCDS=Parent=FBtr0087458;Name=l(2)k08015-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10228-RA" - - - - -	4964	10,376,826 – 10,376,921	+	6	101	82.82	-2.39	0.60	0.619448
3008	2R_DroMel_CAF1	10,377,362 – 10,377,461	- - - "knownCDS=Parent=FBtr0087458;Name=l(2)k08015-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10228-RA" - - - - -	4965	10,377,362 – 10,377,461	-	6	111	82.65	-1.36	0.79	0.545030
3009	2R_DroMel_CAF1	10,379,170 – 10,379,275	- - - "knownCDS=Parent=FBtr0087458;Name=l(2)k08015-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10228-RA" - - - - -	4966	10,379,170 – 10,379,275	-	6	108	77.92	-1.59	0.58	0.607324
3010	2R_DroMel_CAF1	10,380,039 – 10,380,145	- - - "knownCDS=Parent=FBtr0087458;Name=l(2)k08015-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10228-RA" - - - - -	4967	10,380,039 – 10,380,145	+	6	109	78.79	-1.97	0.54	0.717761
3011	2R_DroMel_CAF1	10,386,844 – 10,386,964	- - - "knownCDS=Parent=FBtr0087450;Name=Cyp6a22-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10240-RA" - - - - -	4968	10,386,844 – 10,386,964	-	4	120	93.06	-1.45	0.86	0.555011
3012	2R_DroMel_CAF1	10,387,644 – 10,387,762	- - - "knownCDS=Parent=FBtr0087450;Name=Cyp6a22-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10240-RA" - - - - -	4969	10,387,644 – 10,387,762	-	3	120	84.36	-1.80	0.87	0.830329
3013	2R_DroMel_CAF1	10,398,989 – 10,399,088	- - - - - - - - -	4970	10,398,989 – 10,399,088	+	4	102	76.82	-2.41	0.64	0.991146
3013	2R_DroMel_CAF1	10,398,989 – 10,399,088	- - - - - - - - -	4971	10,398,989 – 10,399,088	-	4	102	76.82	-1.54	0.67	0.553716
3014	2R_DroMel_CAF1	10,402,625 – 10,402,720	- - - - - - - - -	4972	10,402,625 – 10,402,720	+	6	96	81.94	-1.77	0.62	0.544046
3015	2R_DroMel_CAF1	10,402,790 – 10,402,909	- - - "knownCDS=Parent=FBtr0087455;Name=Cyp6a8-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10248-RA" - - - - -	4973	10,402,790 – 10,402,909	+	6	119	82.41	-1.38	0.70	0.500000
3016	2R_DroMel_CAF1	10,412,687 – 10,412,795	- - - - - - - - -	4974	10,412,687 – 10,412,795	-	5	120	74.10	-1.77	0.40	0.589611
3017	2R_DroMel_CAF1	10,415,703 – 10,415,823	- - - "knownCDS=Parent=FBtr0087405;Name=Cyp317a1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17453-RA" - - - - -	4975	10,415,703 – 10,415,823	+	6	120	76.50	-2.52	0.48	0.960579
3017	2R_DroMel_CAF1	10,415,703 – 10,415,823		4976	10,415,703 – 10,415,823	-	6	120	76.50	-1.89	0.60	0.913102
3018	2R_DroMel_CAF1	10,417,328 – 10,417,468	- - - - - - - - -	4977	10,417,328 – 10,417,428	-	6	106	79.48	-1.46	0.66	0.671411
3018	2R_DroMel_CAF1	10,417,328 – 10,417,468	- - - - - - - - -	4978	10,417,355 – 10,417,468	-	6	120	81.44	-2.21	0.77	0.890969
3019	2R_DroMel_CAF1	10,418,478 – 10,418,580	- - - - - - - - -	4979	10,418,478 – 10,418,580	+	6	106	78.27	-1.31	0.66	0.632741
3019	2R_DroMel_CAF1	10,418,478 – 10,418,580	- - - - - - - - -	4980	10,418,478 – 10,418,580	-	6	106	78.27	-1.48	0.68	0.798661
3020	2R_DroMel_CAF1	10,419,182 – 10,419,290	- - - "knownCDS=Parent=FBtr0087429, FBtr0087430, FBtr0087431;Name=CG10249-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10249-RC, FlyBase+Annotation+IDs:CG10249-RA, FlyBase+Annotation+IDs:CG10249-RB" - - - - -	4981	10,419,182 – 10,419,290	+	6	114	80.00	-1.61	0.65	0.710201
3020	2R_DroMel_CAF1	10,419,182 – 10,419,290		4982	10,419,182 – 10,419,290	-	6	114	80.00	-2.07	0.62	0.844687
3021	2R_DroMel_CAF1	10,421,723 – 10,421,815	- - - - - - - - -	4983	10,421,723 – 10,421,815	-	6	101	75.33	-1.84	0.67	0.960863
3022	2R_DroMel_CAF1	10,425,626 – 10,425,716	- - - - - - - - -	4984	10,425,626 – 10,425,716	+	4	94	70.65	-1.57	0.54	0.522093
3023	2R_DroMel_CAF1	10,433,774 – 10,433,868	- - - - - - - - -	4985	10,433,774 – 10,433,868	-	6	113	78.05	-1.91	0.52	0.641272
3024	2R_DroMel_CAF1	10,435,624 – 10,435,720	- - - - - - - - -	4986	10,435,624 – 10,435,720	-	4	119	78.90	-2.02	0.69	0.923976
3025	2R_DroMel_CAF1	10,437,159 – 10,437,255	- - - - - - - - -	4987	10,437,159 – 10,437,255	+	6	101	76.68	-1.31	0.69	0.791191
3025	2R_DroMel_CAF1	10,437,159 – 10,437,255	- - - - - - - - -	4988	10,437,159 – 10,437,255	-	6	101	76.68	-1.45	0.60	0.625482
3026	2R_DroMel_CAF1	10,440,726 – 10,440,821	- - - - - - - - -	4989	10,440,726 – 10,440,821	+	5	120	69.05	-2.12	0.28	0.908203
3027	2R_DroMel_CAF1	10,442,823 – 10,442,918	- - - - - - - - -	4990	10,442,823 – 10,442,918	-	6	98	89.40	-2.01	0.85	0.846786
3028	2R_DroMel_CAF1	10,448,653 – 10,448,743	- - - - - - - - -	4991	10,448,653 – 10,448,743	+	6	94	67.87	-2.38	0.26	0.885665
3029	2R_DroMel_CAF1	10,452,249 – 10,452,369	- - - "knownCDS=Parent=FBtr0087407;Name=Lap1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10255-RA" - - - - -	4992	10,452,249 – 10,452,369	-	6	120	79.89	-2.30	0.47	0.585110
3030	2R_DroMel_CAF1	10,452,962 – 10,453,058	- - - "knownCDS=Parent=FBtr0087407;Name=Lap1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10255-RA" - - - - -	4993	10,452,962 – 10,453,058	+	6	102	76.76	-1.20	0.68	0.683213
3031	2R_DroMel_CAF1	10,455,235 – 10,455,330	- - - - - - - - -	4994	10,455,235 – 10,455,330	+	6	115	80.59	-1.90	0.57	0.601629
3031	2R_DroMel_CAF1	10,455,235 – 10,455,330	- - - - - - - - -	4995	10,455,235 – 10,455,330	-	6	115	80.59	-2.12	0.54	0.613535
3032	2R_DroMel_CAF1	10,464,385 – 10,464,483	- - - - - - - - -	4996	10,464,385 – 10,464,483	+	6	104	82.53	-1.73	0.72	0.648615
3033	2R_DroMel_CAF1	10,466,746 – 10,466,842	- - - "knownCDS=Parent=FBtr0087427;Name=CG30475-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30475-RA" - - - - -	4997	10,466,746 – 10,466,842	+	6	102	76.64	-1.60	0.66	0.877857
3034	2R_DroMel_CAF1	10,467,455 – 10,467,545	- - - - - - - - -	4998	10,467,455 – 10,467,545	+	6	94	79.05	-1.94	0.59	0.800376
3035	2R_DroMel_CAF1	10,473,637 – 10,473,788	- - - - - - - - -	4999	10,473,637 – 10,473,748	-	3	120	74.56	-1.48	0.66	0.751019
3035	2R_DroMel_CAF1	10,473,637 – 10,473,788	- - - - - - - - -	5000	10,473,673 – 10,473,788	-	4	120	74.51	-1.47	0.67	0.558478
3036	2R_DroMel_CAF1	10,477,234 – 10,477,326	- - - - - - - - -	5001	10,477,234 – 10,477,326	-	6	97	79.86	-1.86	0.58	0.680443
3037	2R_DroMel_CAF1	10,480,990 – 10,481,081	- - - - - - - - -	5002	10,480,990 – 10,481,081	+	6	103	80.47	-1.89	0.63	0.756475
3038	2R_DroMel_CAF1	10,481,335 – 10,481,483	- - - - - - - - -	5003	10,481,335 – 10,481,452	+	5	118	96.09	-1.21	0.90	0.603554
3038	2R_DroMel_CAF1	10,481,335 – 10,481,483	- - - - - - - - -	5004	10,481,374 – 10,481,483	-	5	109	99.08	-1.41	0.99	0.859298
3039	2R_DroMel_CAF1	10,482,064 – 10,482,165	- - - - - - - - -	5005	10,482,064 – 10,482,165	-	5	106	78.02	-1.68	0.75	0.874913
3040	2R_DroMel_CAF1	10,483,647 – 10,483,766	- - - - - - - - -	5006	10,483,647 – 10,483,747	-	6	120	80.48	-1.66	0.60	0.566795
3040	2R_DroMel_CAF1	10,483,647 – 10,483,766	- - - - - - - - -	5007	10,483,673 – 10,483,766	-	6	119	74.29	-1.52	0.62	0.844043
3041	2R_DroMel_CAF1	10,484,121 – 10,484,211	- - - - - - - - -	5008	10,484,121 – 10,484,211	+	6	102	79.37	-1.35	0.74	0.754457
3042	2R_DroMel_CAF1	10,490,551 – 10,490,650	- - - - - - - - -	5009	10,490,551 – 10,490,650	+	5	111	73.61	-1.57	0.72	0.941260
3043	2R_DroMel_CAF1	10,496,849 – 10,496,987	- - - - - - - - -	5010	10,496,849 – 10,496,949	+	5	102	82.34	-3.09	0.70	0.994317
				5011	10,496,849 – 10,496,949	-	5	102	82.34	-3.54	0.59	0.993605
				5012	10,496,876 – 10,496,987	+	5	115	75.38	-3.14	0.62	0.999644
				5013	10,496,876 – 10,496,987	-	5	115	75.38	-3.45	0.58	0.999843
3044	2R_DroMel_CAF1	10,499,167 – 10,499,299	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000088; Name=Dmel_Leu_AAG_14000088;TFAMID=DmelLAAG-10499271" "tRNAscan=type:Leu:anticodon:AAG f:10499189_t:10499292_strand=-_cove=71.48" - - "Rfam=AE003812.3/86565-86484_RF00005;tRNA;\|1e-40" - - - "Flybase=FBgn0050229:CR30229:cytosolic_tRNA_gene\|1e-42"	5014	10,499,167 – 10,499,270	+	6	120	85.50	-2.40	0.94	0.990135
3044	2R_DroMel_CAF1	10,499,167 – 10,499,299		5015	10,499,190 – 10,499,299	+	6	120	81.53	-1.18	0.83	0.522336
3045	2R_DroMel_CAF1	10,499,628 – 10,499,721	- - - - - - - - -	5016	10,499,628 – 10,499,721	+	3	93	96.40	-1.78	0.89	0.519656
3046	2R_DroMel_CAF1	10,509,207 – 10,509,297	- - - - - - - - -	5017	10,509,207 – 10,509,297	+	4	90	94.78	-1.60	0.89	0.658721
3046	2R_DroMel_CAF1	10,509,207 – 10,509,297	- - - - - - - - -	5018	10,509,207 – 10,509,297	-	4	90	94.78	-1.95	0.98	0.952336
3047	2R_DroMel_CAF1	10,510,500 – 10,510,599	- - - - - - - - -	5019	10,510,500 – 10,510,599	+	3	102	93.46	-1.71	0.93	0.684534
3048	2R_DroMel_CAF1	10,511,743 – 10,511,863	- - - - - - - - -	5020	10,511,743 – 10,511,863	-	4	120	81.97	-2.34	0.57	0.761141
3049	2R_DroMel_CAF1	10,512,151 – 10,512,255	- - - - - - - - -	5021	10,512,151 – 10,512,255	+	6	116	76.03	-2.44	0.49	0.961821
3050	2R_DroMel_CAF1	10,512,918 – 10,513,021	- - - - - - - - -	5022	10,512,918 – 10,513,021	-	5	109	70.59	-1.91	0.37	0.842324
3051	2R_DroMel_CAF1	10,513,167 – 10,513,279	- - - - - - - - -	5023	10,513,167 – 10,513,279	+	5	119	85.79	-1.82	0.78	0.787427
3051	2R_DroMel_CAF1	10,513,167 – 10,513,279	- - - - - - - - -	5024	10,513,167 – 10,513,279	-	5	119	85.79	-2.76	0.77	0.987611
3052	2R_DroMel_CAF1	10,514,120 – 10,514,279	- - - - - - - - -	5025	10,514,120 – 10,514,239	+	5	120	95.99	-1.61	0.89	0.938340
				5026	10,514,120 – 10,514,239	-	5	120	95.99	-1.18	0.95	0.747205
				5027	10,514,160 – 10,514,279	+	5	120	95.82	-3.75	0.90	0.999887
				5028	10,514,160 – 10,514,279	-	5	120	95.82	-1.61	0.93	0.980068
3053	2R_DroMel_CAF1	10,515,270 – 10,515,370	- - - - - - - - -	5029	10,515,270 – 10,515,370	-	5	111	83.17	-2.21	0.58	0.694523
3054	2R_DroMel_CAF1	10,515,470 – 10,515,590	- - - - - - - - -	5030	10,515,470 – 10,515,590	+	3	120	89.58	-2.85	0.80	0.880527
3055	2R_DroMel_CAF1	10,519,159 – 10,519,253	- - - - - - - - -	5031	10,519,159 – 10,519,253	+	6	106	78.10	-2.87	0.54	0.981787
3055	2R_DroMel_CAF1	10,519,159 – 10,519,253	- - - - - - - - -	5032	10,519,159 – 10,519,253	-	6	106	78.10	-3.58	0.52	0.994185
3056	2R_DroMel_CAF1	10,520,269 – 10,520,380	- - - - - - - - -	5033	10,520,269 – 10,520,380	+	5	118	83.69	-1.84	0.65	0.606766
3057	2R_DroMel_CAF1	10,522,426 – 10,522,528	- - - - - - - - -	5034	10,522,426 – 10,522,528	-	3	102	81.69	-1.58	0.79	0.670096
3058	2R_DroMel_CAF1	10,522,627 – 10,522,724	- - - - - - - - -	5035	10,522,627 – 10,522,724	+	5	98	95.69	-1.24	0.88	0.576243
3058	2R_DroMel_CAF1	10,522,627 – 10,522,724	- - - - - - - - -	5036	10,522,627 – 10,522,724	-	5	98	95.69	-1.09	0.96	0.628386
3059	2R_DroMel_CAF1	10,524,787 – 10,524,941	- - - - - - - - -	5037	10,524,787 – 10,524,901	-	5	120	96.05	-1.80	0.91	0.989515
				5038	10,524,821 – 10,524,941	+	5	120	99.33	-1.46	0.97	0.840513
				5039	10,524,821 – 10,524,941	-	5	120	99.33	-1.46	0.99	0.884494
3060	2R_DroMel_CAF1	10,525,246 – 10,525,399	- - - - - - - - -	5040	10,525,246 – 10,525,366	+	5	120	98.00	-1.42	0.93	0.831663
3060	2R_DroMel_CAF1	10,525,246 – 10,525,399	- - - - - - - - -	5041	10,525,286 – 10,525,399	+	5	120	96.20	-1.41	0.86	0.714801
3061	2R_DroMel_CAF1	10,525,479 – 10,525,599	- - - - - - - - -	5042	10,525,479 – 10,525,599	+	5	120	88.19	-1.64	0.77	0.665710
3062	2R_DroMel_CAF1	10,526,168 – 10,526,288	- - - - - - - - -	5043	10,526,168 – 10,526,288	+	5	120	97.17	-2.44	0.99	0.999869
3063	2R_DroMel_CAF1	10,526,957 – 10,527,077	- - - - - - - - -	5044	10,526,957 – 10,527,077	+	5	120	95.75	-2.21	0.82	0.961515
3063	2R_DroMel_CAF1	10,526,957 – 10,527,077	- - - - - - - - -	5045	10,526,957 – 10,527,077	-	5	120	95.75	-3.43	0.77	0.960161
3064	2R_DroMel_CAF1	10,527,310 – 10,527,467	- - - - - - - - -	5046	10,527,310 – 10,527,430	+	5	120	100.00	-1.55	0.93	0.735673
				5047	10,527,310 – 10,527,430	-	5	120	100.00	-1.98	1.00	0.989640
				5048	10,527,350 – 10,527,467	+	5	120	97.29	-2.58	0.80	0.920275
3065	2R_DroMel_CAF1	10,527,506 – 10,527,746	- - - - - - - - -	5049	10,527,506 – 10,527,626	-	5	120	97.08	-1.79	0.88	0.957264
3065	2R_DroMel_CAF1	10,527,506 – 10,527,746	- - - - - - - - -	5050	10,527,626 – 10,527,746	-	5	120	95.58	-1.66	0.84	0.848864
3066	2R_DroMel_CAF1	10,529,672 – 10,529,963	- - - - - - - - -	5051	10,529,672 – 10,529,774	-	5	120	90.59	-2.88	0.80	0.994602
				5052	10,529,704 – 10,529,808	+	5	120	88.88	-1.93	0.79	0.880042
				5053	10,529,704 – 10,529,808	-	5	120	88.88	-2.60	0.80	0.990171
				5054	10,529,735 – 10,529,848	+	5	120	82.52	-1.78	0.60	0.500000
				5055	10,529,735 – 10,529,848	-	5	120	82.52	-2.92	0.73	0.992324
				5056	10,529,848 – 10,529,963	+	5	120	94.15	-1.39	0.83	0.609932
3067	2R_DroMel_CAF1	10,538,633 – 10,538,785	- - - - - - - - -	5057	10,538,633 – 10,538,745	+	5	120	89.18	-2.34	0.71	0.784379
3067	2R_DroMel_CAF1	10,538,633 – 10,538,785	- - - - - - - - -	5058	10,538,673 – 10,538,785	+	5	120	89.78	-1.56	0.80	0.712373
3068	2R_DroMel_CAF1	10,539,387 – 10,539,547	- - - "knownCDS=Parent=FBtr0087420;Name=Obp51a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30473-RA" - - - - -	5059	10,539,387 – 10,539,507	+	5	120	72.92	-2.41	0.45	0.993296
3068	2R_DroMel_CAF1	10,539,387 – 10,539,547		5060	10,539,427 – 10,539,547	-	4	120	91.67	-1.98	0.79	0.792979
3069	2R_DroMel_CAF1	10,540,293 – 10,540,687	- - - - - - - - -	5061	10,540,293 – 10,540,392	+	3	108	93.19	-1.84	0.88	0.612511
				5062	10,540,360 – 10,540,472	+	4	120	86.80	-1.61	0.74	0.646205
				5063	10,540,392 – 10,540,512	+	5	120	99.33	-1.98	0.97	0.991185
				5064	10,540,392 – 10,540,512	-	5	120	99.33	-2.43	1.01	0.999293
				5065	10,540,432 – 10,540,548	+	5	120	96.49	-2.36	0.97	0.999812
				5066	10,540,432 – 10,540,548	-	5	120	96.49	-3.90	0.98	0.999980
				5067	10,540,548 – 10,540,650	+	4	108	90.87	-1.86	0.91	0.928382
				5068	10,540,588 – 10,540,687	+	4	108	95.17	-2.36	0.89	0.945122
				5069	10,540,588 – 10,540,687	-	4	108	95.17	-2.70	0.84	0.915469
3070	2R_DroMel_CAF1	10,542,379 – 10,542,493	- - - - - - - - -	5070	10,542,379 – 10,542,493	-	5	118	86.02	-1.84	0.68	0.594016
3071	2R_DroMel_CAF1	10,542,557 – 10,542,675	- - - - - - - - -	5071	10,542,557 – 10,542,675	-	5	120	95.23	-1.50	0.89	0.918195
3072	2R_DroMel_CAF1	10,543,359 – 10,543,470	- - - - - - - - -	5072	10,543,359 – 10,543,470	-	4	120	94.81	-1.50	0.88	0.537917
3073	2R_DroMel_CAF1	10,543,550 – 10,543,670	- - - - - - - - -	5073	10,543,550 – 10,543,670	-	5	120	78.49	-1.66	0.70	0.780993
3074	2R_DroMel_CAF1	10,543,815 – 10,543,935	- - - - - - - - -	5074	10,543,815 – 10,543,935	+	5	120	96.92	-1.79	0.81	0.677817
3075	2R_DroMel_CAF1	10,544,055 – 10,544,210	- - - - - - - - -	5075	10,544,055 – 10,544,170	+	5	120	88.52	-2.27	0.91	0.997646
3075	2R_DroMel_CAF1	10,544,055 – 10,544,210	- - - - - - - - -	5076	10,544,095 – 10,544,210	-	5	120	86.80	-1.43	0.80	0.500000
3076	2R_DroMel_CAF1	10,544,650 – 10,544,806	- - - - - - - - -	5077	10,544,650 – 10,544,766	-	4	116	85.49	-3.19	0.83	0.996081
3076	2R_DroMel_CAF1	10,544,650 – 10,544,806	- - - - - - - - -	5078	10,544,686 – 10,544,806	-	5	120	87.79	-1.94	0.76	0.818149
3077	2R_DroMel_CAF1	10,545,262 – 10,545,377	- - - - - - - - -	5079	10,545,262 – 10,545,377	-	5	120	82.73	-1.81	0.60	0.500000
3078	2R_DroMel_CAF1	10,546,279 – 10,546,383	- - - - - - - - -	5080	10,546,279 – 10,546,383	+	5	120	89.35	-1.35	0.82	0.520696
3079	2R_DroMel_CAF1	10,546,536 – 10,546,642	- - - - - - - - -	5081	10,546,536 – 10,546,642	+	5	120	76.52	-2.19	0.71	0.986698
3080	2R_DroMel_CAF1	10,547,914 – 10,548,029	- - - - - - - - -	5082	10,547,914 – 10,548,029	+	5	120	96.44	-1.26	0.95	0.810336
3080	2R_DroMel_CAF1	10,547,914 – 10,548,029	- - - - - - - - -	5083	10,547,914 – 10,548,029	-	5	120	96.44	-2.33	0.94	0.999550
3081	2R_DroMel_CAF1	10,548,258 – 10,548,436	- - - - - - - - -	5084	10,548,258 – 10,548,370	+	4	120	70.92	-1.64	0.56	0.684641
3081	2R_DroMel_CAF1	10,548,258 – 10,548,436	- - - - - - - - -	5085	10,548,330 – 10,548,436	+	3	120	83.29	-1.68	0.72	0.543002
3082	2R_DroMel_CAF1	10,548,791 – 10,549,008	- - - - - - - - -	5086	10,548,791 – 10,548,911	+	5	120	95.92	-1.46	0.91	0.909927
				5087	10,548,791 – 10,548,911	-	5	120	95.92	-1.40	0.96	0.948772
				5088	10,548,911 – 10,549,008	+	4	105	85.64	-3.32	0.84	0.996974
				5089	10,548,911 – 10,549,008	-	4	105	85.64	-3.13	0.81	0.994164
3083	2R_DroMel_CAF1	10,549,826 – 10,549,981	- - - - - - - - -	5090	10,549,826 – 10,549,941	-	5	120	89.08	-1.77	0.75	0.694832
3083	2R_DroMel_CAF1	10,549,826 – 10,549,981	- - - - - - - - -	5091	10,549,866 – 10,549,981	+	5	120	88.05	-1.70	0.73	0.608616
3084	2R_DroMel_CAF1	10,550,021 – 10,550,247	- - - - - - - - -	5092	10,550,021 – 10,550,127	+	3	108	82.37	-0.73	0.94	0.785996
				5093	10,550,051 – 10,550,167	-	3	118	82.75	-1.65	0.69	0.500000
				5094	10,550,091 – 10,550,207	-	3	118	82.75	-2.21	0.74	0.876305
				5095	10,550,127 – 10,550,247	-	5	120	96.00	-1.84	0.92	0.993374
3085	2R_DroMel_CAF1	10,556,704 – 10,556,796	- - - - - - - - -	5096	10,556,704 – 10,556,796	+	6	111	76.67	-1.56	0.58	0.653416
3085	2R_DroMel_CAF1	10,556,704 – 10,556,796	- - - - - - - - -	5097	10,556,704 – 10,556,796	-	6	111	76.67	-1.19	0.73	0.792390
3086	2R_DroMel_CAF1	10,574,420 – 10,574,519	- - - - - - - - -	5098	10,574,420 – 10,574,519	-	6	102	76.65	-1.96	0.64	0.946999
3087	2R_DroMel_CAF1	10,577,293 – 10,577,390	- - - - - - - - -	5099	10,577,293 – 10,577,390	+	5	113	81.28	-1.74	0.68	0.685111
3088	2R_DroMel_CAF1	10,577,422 – 10,577,533	- - - - - - - - -	5100	10,577,422 – 10,577,533	+	6	112	78.00	-1.84	0.52	0.581460
3088	2R_DroMel_CAF1	10,577,422 – 10,577,533	- - - - - - - - -	5101	10,577,422 – 10,577,533	-	6	112	78.00	-1.81	0.55	0.684382
3089	2R_DroMel_CAF1	10,578,849 – 10,578,943	- - - - - - - - -	5102	10,578,849 – 10,578,943	-	5	95	92.50	-1.66	0.86	0.942463
3090	2R_DroMel_CAF1	10,582,777 – 10,582,872	- - - - - - - - -	5103	10,582,777 – 10,582,872	-	6	99	81.37	-1.72	0.60	0.500000
3091	2R_DroMel_CAF1	10,582,992 – 10,583,084	- - - - - - - - -	5104	10,582,992 – 10,583,084	-	5	92	72.33	-2.16	0.55	0.982608
3092	2R_DroMel_CAF1	10,584,550 – 10,584,654	- - - - - - - - -	5105	10,584,550 – 10,584,654	+	6	105	78.14	-0.97	0.73	0.555854
3092	2R_DroMel_CAF1	10,584,550 – 10,584,654	- - - - - - - - -	5106	10,584,550 – 10,584,654	-	6	105	78.14	-1.90	0.70	0.934505
3093	2R_DroMel_CAF1	10,584,817 – 10,584,916	- - - - - - - - -	5107	10,584,817 – 10,584,916	+	6	107	88.85	-3.19	0.83	0.973586
3093	2R_DroMel_CAF1	10,584,817 – 10,584,916	- - - - - - - - -	5108	10,584,817 – 10,584,916	-	6	107	88.85	-3.07	0.75	0.671381
3094	2R_DroMel_CAF1	10,591,210 – 10,591,313	- - - - - - - - -	5109	10,591,210 – 10,591,313	+	6	104	81.64	-1.81	0.66	0.678416
3095	2R_DroMel_CAF1	10,592,023 – 10,592,118	- - - - - - - - -	5110	10,592,023 – 10,592,118	+	5	95	83.67	-2.15	0.73	0.892620
3095	2R_DroMel_CAF1	10,592,023 – 10,592,118	- - - - - - - - -	5111	10,592,023 – 10,592,118	-	5	95	83.67	-2.56	0.67	0.939555
3096	2R_DroMel_CAF1	10,592,437 – 10,592,529	- - - - - - - - -	5112	10,592,437 – 10,592,529	-	6	100	79.56	-2.22	0.48	0.613024
3097	2R_DroMel_CAF1	10,592,703 – 10,592,794	- - - - - - - - -	5113	10,592,703 – 10,592,794	+	6	104	82.14	-2.46	0.52	0.516858
3098	2R_DroMel_CAF1	10,594,891 – 10,595,008	- - - - - - - - -	5114	10,594,891 – 10,595,008	+	5	120	83.76	-3.05	0.71	0.990556
3098	2R_DroMel_CAF1	10,594,891 – 10,595,008	- - - - - - - - -	5115	10,594,891 – 10,595,008	-	5	120	83.76	-3.08	0.61	0.963933
3099	2R_DroMel_CAF1	10,595,297 – 10,595,396	- - - - - - - - -	5116	10,595,297 – 10,595,396	-	5	102	93.71	-1.08	0.92	0.514699
3100	2R_DroMel_CAF1	10,596,151 – 10,596,244	- - - - - - - - -	5117	10,596,151 – 10,596,244	+	6	93	91.83	-1.85	0.89	0.943697
3101	2R_DroMel_CAF1	10,598,243 – 10,598,345	- - - - - - - - -	5118	10,598,243 – 10,598,345	+	6	113	78.37	-1.44	0.60	0.505777
3102	2R_DroMel_CAF1	10,609,503 – 10,609,594	- - - - - - - - -	5119	10,609,503 – 10,609,594	-	6	120	75.09	-1.67	0.53	0.647078
3103	2R_DroMel_CAF1	10,611,945 – 10,612,050	- - - - - - - - -	5120	10,611,945 – 10,612,050	-	6	112	82.28	-1.85	0.71	0.705612
3104	2R_DroMel_CAF1	10,621,910 – 10,622,042	- - - - - - - - -	5121	10,621,910 – 10,622,003	-	6	102	78.01	-2.45	0.47	0.879721
				5122	10,621,948 – 10,622,042	+	6	107	82.47	-2.44	0.66	0.782100
				5123	10,621,948 – 10,622,042	-	6	107	82.47	-2.22	0.66	0.718480
3105	2R_DroMel_CAF1	10,622,079 – 10,622,176	- - - - - - - - -	5124	10,622,079 – 10,622,176	+	5	103	86.28	-2.33	0.71	0.879238
3106	2R_DroMel_CAF1	10,622,420 – 10,622,530	- - - - - - - - -	5125	10,622,420 – 10,622,530	+	6	120	81.18	-1.82	0.64	0.685549
3106	2R_DroMel_CAF1	10,622,420 – 10,622,530	- - - - - - - - -	5126	10,622,420 – 10,622,530	-	6	120	81.18	-3.00	0.63	0.932481
3107	2R_DroMel_CAF1	10,623,822 – 10,623,931	- - - - - - - - -	5127	10,623,822 – 10,623,931	+	5	112	95.50	-1.07	1.03	0.747484
3108	2R_DroMel_CAF1	10,628,802 – 10,628,893	- - - - - - - - -	5128	10,628,802 – 10,628,893	+	6	106	80.07	-2.15	0.65	0.883200
3108	2R_DroMel_CAF1	10,628,802 – 10,628,893	- - - - - - - - -	5129	10,628,802 – 10,628,893	-	6	106	80.07	-2.13	0.71	0.912918
3109	2R_DroMel_CAF1	10,631,021 – 10,631,154	- - - - - - - - -	5130	10,631,021 – 10,631,120	+	6	100	69.15	-3.04	0.51	0.998589
				5131	10,631,060 – 10,631,154	+	6	107	82.22	-4.56	0.57	0.971796
				5132	10,631,060 – 10,631,154	-	6	107	82.22	-3.58	0.51	0.890623
3110	2R_DroMel_CAF1	10,633,904 – 10,634,057	- - - - - - - - -	5133	10,633,904 – 10,634,022	-	6	120	80.52	-1.40	0.65	0.539223
3110	2R_DroMel_CAF1	10,633,904 – 10,634,057	- - - - - - - - -	5134	10,633,944 – 10,634,057	+	5	114	86.83	-2.14	0.67	0.651158
3111	2R_DroMel_CAF1	10,647,272 – 10,647,376	- - - - - - - - -	5135	10,647,272 – 10,647,376	+	3	105	94.21	-2.80	0.90	0.953480
3111	2R_DroMel_CAF1	10,647,272 – 10,647,376	- - - - - - - - -	5136	10,647,272 – 10,647,376	-	3	105	94.21	-2.00	0.90	0.734622
3112	2R_DroMel_CAF1	10,647,671 – 10,647,766	- - - - - - - - -	5137	10,647,671 – 10,647,766	-	5	107	63.92	-1.61	0.71	0.953639
3113	2R_DroMel_CAF1	10,650,461 – 10,650,551	- - - - - - - - -	5138	10,650,461 – 10,650,551	+	4	96	84.14	-3.19	0.65	0.978674
3114	2R_DroMel_CAF1	10,654,056 – 10,654,153	- - - "knownCDS=Parent=FBtr0087415;Name=chn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11798-RA" - - - - -	5139	10,654,056 – 10,654,153	+	6	103	81.63	-2.81	0.59	0.863595
3114	2R_DroMel_CAF1	10,654,056 – 10,654,153		5140	10,654,056 – 10,654,153	-	6	103	81.63	-1.82	0.63	0.627538
3115	2R_DroMel_CAF1	10,654,544 – 10,654,637	- - - "knownCDS=Parent=FBtr0087415;Name=chn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11798-RA" - - - - -	5141	10,654,544 – 10,654,637	-	6	105	76.75	-1.67	0.61	0.822017
3116	2R_DroMel_CAF1	10,656,956 – 10,657,064	- - - "knownCDS=Parent=FBtr0087415;Name=chn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11798-RA" - - - - -	5142	10,656,956 – 10,657,064	+	6	114	77.76	-2.00	0.53	0.788592
3116	2R_DroMel_CAF1	10,656,956 – 10,657,064		5143	10,656,956 – 10,657,064	-	6	114	77.76	-2.14	0.53	0.864569
3117	2R_DroMel_CAF1	10,657,571 – 10,657,688	- - - "knownCDS=Parent=FBtr0087415;Name=chn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11798-RA" - - - - -	5144	10,657,571 – 10,657,688	-	6	120	77.70	-1.96	0.62	0.910251
3118	2R_DroMel_CAF1	10,657,947 – 10,658,046	- - - "knownCDS=Parent=FBtr0087415;Name=chn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11798-RA" - - - - -	5145	10,657,947 – 10,658,046	+	6	117	78.44	-1.73	0.57	0.645735
3118	2R_DroMel_CAF1	10,657,947 – 10,658,046		5146	10,657,947 – 10,658,046	-	6	117	78.44	-2.61	0.60	0.969914
3119	2R_DroMel_CAF1	10,662,051 – 10,662,247	- - - "knownCDS=Parent=FBtr0087418;Name=CG8089-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8089-RA" - - - - -	5147	10,662,051 – 10,662,171	-	6	120	82.89	-1.70	0.69	0.561724
3119	2R_DroMel_CAF1	10,662,051 – 10,662,247		5148	10,662,131 – 10,662,247	+	6	120	82.84	-2.35	0.75	0.829539
3120	2R_DroMel_CAF1	10,662,828 – 10,662,924	- - - "knownCDS=Parent=FBtr0087417;Name=CG7544-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7544-RA" - - - - -	5149	10,662,828 – 10,662,924	-	5	120	60.59	-1.31	0.50	0.529175
3121	2R_DroMel_CAF1	10,665,825 – 10,665,924	- - - - - - - - -	5150	10,665,825 – 10,665,924	+	6	106	81.07	-1.54	0.77	0.745636
3122	2R_DroMel_CAF1	10,666,800 – 10,666,896	- - - - - - - - -	5151	10,666,800 – 10,666,896	+	6	105	76.10	-1.73	0.55	0.718433
3123	2R_DroMel_CAF1	10,670,739 – 10,670,853	- - - - - - - - -	5152	10,670,739 – 10,670,853	+	6	114	79.19	-1.41	0.67	0.682308
3123	2R_DroMel_CAF1	10,670,739 – 10,670,853	- - - - - - - - -	5153	10,670,739 – 10,670,853	-	6	114	79.19	-1.61	0.59	0.562468
3124	2R_DroMel_CAF1	10,671,283 – 10,671,405	- - - - - - - - -	5154	10,671,283 – 10,671,387	-	6	119	69.14	-1.95	0.35	0.760370
3124	2R_DroMel_CAF1	10,671,283 – 10,671,405	- - - - - - - - -	5155	10,671,309 – 10,671,405	+	6	97	79.85	-1.26	0.66	0.536782
3125	2R_DroMel_CAF1	10,672,567 – 10,672,669	- - - - - - - - -	5156	10,672,567 – 10,672,669	-	5	102	93.82	-1.44	0.91	0.930100
3126	2R_DroMel_CAF1	10,679,214 – 10,679,309	- - - - - - - - -	5157	10,679,214 – 10,679,309	+	6	100	78.77	-1.81	0.61	0.798969
3127	2R_DroMel_CAF1	10,679,687 – 10,679,785	- - - - - - - - -	5158	10,679,687 – 10,679,785	+	6	109	77.28	-2.16	0.51	0.859810
3128	2R_DroMel_CAF1	10,682,818 – 10,682,917	- - - - - - - - -	5159	10,682,818 – 10,682,917	-	6	106	81.57	-1.56	0.69	0.629785
3129	2R_DroMel_CAF1	10,683,566 – 10,683,687	- - - - - - - - -	5160	10,683,566 – 10,683,657	+	6	103	77.54	-1.85	0.71	0.942124
3129	2R_DroMel_CAF1	10,683,566 – 10,683,687	- - - - - - - - -	5161	10,683,583 – 10,683,687	+	6	114	78.78	-1.34	0.69	0.714701
3130	2R_DroMel_CAF1	10,684,823 – 10,684,937	- - - - - - - - -	5162	10,684,823 – 10,684,917	+	6	115	79.35	-1.92	0.77	0.924206
				5163	10,684,839 – 10,684,937	+	6	120	79.79	-2.11	0.73	0.924942
				5164	10,684,839 – 10,684,937	-	6	120	79.79	-1.88	0.68	0.867201
3131	2R_DroMel_CAF1	10,684,974 – 10,685,068	- - - - - - - - -	5165	10,684,974 – 10,685,068	+	3	94	84.07	-1.93	0.69	0.606281
3132	2R_DroMel_CAF1	10,690,439 – 10,690,553	- - - - - - - - -	5166	10,690,439 – 10,690,553	-	6	114	81.99	-2.42	0.53	0.570848
3133	2R_DroMel_CAF1	10,691,324 – 10,691,426	- - - - - - - - -	5167	10,691,324 – 10,691,426	+	5	102	91.47	-1.33	0.82	0.535865
3133	2R_DroMel_CAF1	10,691,324 – 10,691,426	- - - - - - - - -	5168	10,691,324 – 10,691,426	-	5	102	91.47	-1.73	0.74	0.533604
3134	2R_DroMel_CAF1	10,693,818 – 10,693,934	- - - - - - - - -	5169	10,693,818 – 10,693,934	+	4	119	91.06	-1.98	0.80	0.836502
3135	2R_DroMel_CAF1	10,694,879 – 10,694,984	- - - - - - - - -	5170	10,694,879 – 10,694,984	+	6	108	78.63	-1.85	0.79	0.936487
3136	2R_DroMel_CAF1	10,709,561 – 10,709,659	- - - - - - - - -	5171	10,709,561 – 10,709,659	-	5	98	95.31	-3.07	0.90	0.999873
3137	2R_DroMel_CAF1	10,715,397 – 10,715,491	- - - - - - - - -	5172	10,715,397 – 10,715,491	-	6	99	80.70	-1.44	0.64	0.524264
3138	2R_DroMel_CAF1	10,722,043 – 10,722,136	- - - "knownCDS=Parent=FBtr0087402;Name=CG8092-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8092-RA" - - - - -	5173	10,722,043 – 10,722,136	+	6	93	80.43	-1.52	0.63	0.566341
3139	2R_DroMel_CAF1	10,725,605 – 10,725,703	- - - "knownCDS=Parent=FBtr0087402;Name=CG8092-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8092-RA" - - - - -	5174	10,725,605 – 10,725,703	-	6	107	80.00	-2.16	0.56	0.775984
3140	2R_DroMel_CAF1	10,727,711 – 10,727,822	- - - "knownCDS=Parent=FBtr0087403;Name=CG8092-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8092-RB" - - - - -	5175	10,727,711 – 10,727,822	-	6	111	81.50	-1.75	0.72	0.747173
3141	2R_DroMel_CAF1	10,727,863 – 10,727,962	- - - "knownCDS=Parent=FBtr0087403;Name=CG8092-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8092-RB" - - - - -	5176	10,727,863 – 10,727,962	-	6	99	80.67	-1.85	0.77	0.862254
3142	2R_DroMel_CAF1	10,728,734 – 10,728,847	- - - - - - - - -	5177	10,728,734 – 10,728,847	+	5	120	69.31	-1.88	0.39	0.804308
3143	2R_DroMel_CAF1	10,740,015 – 10,740,110	- - - - - - - - -	5178	10,740,015 – 10,740,110	-	5	108	87.34	-2.05	0.82	0.943481
3144	2R_DroMel_CAF1	10,741,137 – 10,741,228	- - - - - - - - -	5179	10,741,137 – 10,741,228	+	3	105	70.43	-2.55	0.51	0.993925
3144	2R_DroMel_CAF1	10,741,137 – 10,741,228	- - - - - - - - -	5180	10,741,137 – 10,741,228	-	3	105	70.43	-2.08	0.59	0.995727
3145	2R_DroMel_CAF1	10,750,472 – 10,750,570	- - - - - - - - -	5181	10,750,472 – 10,750,570	+	6	102	84.70	-2.75	0.66	0.569875
3145	2R_DroMel_CAF1	10,750,472 – 10,750,570	- - - - - - - - -	5182	10,750,472 – 10,750,570	-	6	102	84.70	-4.23	0.45	0.668301
3146	2R_DroMel_CAF1	10,751,185 – 10,751,299	- - - "knownCDS=Parent=FBtr0087398;Name=Fs-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33466-RA" - - - - -	5183	10,751,185 – 10,751,299	-	6	114	73.22	-1.14	0.71	0.836924
3147	2R_DroMel_CAF1	10,753,096 – 10,753,209	- - - - - - - - -	5184	10,753,096 – 10,753,209	-	6	120	73.14	-1.32	0.76	0.951193
3148	2R_DroMel_CAF1	10,755,185 – 10,755,292	- - - - - - - - -	5185	10,755,185 – 10,755,292	-	3	115	80.83	-2.19	0.75	0.940793
3149	2R_DroMel_CAF1	10,757,382 – 10,757,508	- - - - - - - - -	5186	10,757,382 – 10,757,475	+	5	120	77.40	-1.95	0.58	0.841350
				5187	10,757,382 – 10,757,475	-	5	120	77.40	-1.85	0.62	0.833597
				5188	10,757,411 – 10,757,508	+	5	117	79.12	-2.13	0.62	0.913966
				5189	10,757,411 – 10,757,508	-	5	117	79.12	-1.73	0.62	0.647575
3150	2R_DroMel_CAF1	10,758,293 – 10,758,422	- - - - - - - - -	5190	10,758,293 – 10,758,394	+	6	105	80.35	-2.27	0.48	0.540911
3150	2R_DroMel_CAF1	10,758,293 – 10,758,422	- - - - - - - - -	5191	10,758,325 – 10,758,422	+	5	102	73.88	-1.72	0.51	0.615937
3151	2R_DroMel_CAF1	10,759,021 – 10,759,129	- - - - - - - - -	5192	10,759,021 – 10,759,129	-	6	120	77.14	-2.26	0.46	0.821518
3152	2R_DroMel_CAF1	10,759,186 – 10,759,301	- - - - - - - - -	5193	10,759,186 – 10,759,301	+	6	119	79.94	-2.35	0.53	0.796503
3152	2R_DroMel_CAF1	10,759,186 – 10,759,301	- - - - - - - - -	5194	10,759,186 – 10,759,301	-	6	119	79.94	-1.66	0.66	0.756921
3153	2R_DroMel_CAF1	10,761,250 – 10,761,391	- - - - - - - - -	5195	10,761,250 – 10,761,351	+	5	108	93.83	-1.36	0.91	0.890043
				5196	10,761,250 – 10,761,351	-	5	108	93.83	-1.12	0.90	0.524127
				5197	10,761,272 – 10,761,391	-	5	120	93.07	-1.64	0.80	0.737097
3154	2R_DroMel_CAF1	10,765,323 – 10,765,428	- - - - - - - - -	5198	10,765,323 – 10,765,428	+	6	115	76.71	-1.95	0.70	0.963953
3154	2R_DroMel_CAF1	10,765,323 – 10,765,428	- - - - - - - - -	5199	10,765,323 – 10,765,428	-	6	115	76.71	-2.11	0.56	0.926243
3155	2R_DroMel_CAF1	10,771,030 – 10,771,134	- - - - - - - - -	5200	10,771,030 – 10,771,134	+	5	115	78.94	-1.88	0.61	0.759374
3156	2R_DroMel_CAF1	10,771,392 – 10,771,494	- - - - - - - - -	5201	10,771,392 – 10,771,494	-	6	103	82.04	-1.34	0.77	0.571085
3157	2R_DroMel_CAF1	10,781,470 – 10,781,571	- - - - - - - - -	5202	10,781,470 – 10,781,571	+	5	101	99.21	-1.52	0.96	0.888942
3158	2R_DroMel_CAF1	10,789,605 – 10,789,706	- - - "knownCDS=Parent=FBtr0087395;Name=CG30078-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30078-RB" - - - - -	5203	10,789,605 – 10,789,706	-	6	112	76.70	-1.76	0.74	0.953254
3159	2R_DroMel_CAF1	10,790,503 – 10,790,629	- - - - - - - - -	5204	10,790,503 – 10,790,605	-	6	118	75.60	-2.56	0.25	0.557219
3159	2R_DroMel_CAF1	10,790,503 – 10,790,629	- - - - - - - - -	5205	10,790,537 – 10,790,629	-	6	120	75.44	-3.15	0.27	0.948889
3160	2R_DroMel_CAF1	10,791,686 – 10,791,788	- - - - - - - - -	5206	10,791,686 – 10,791,788	-	6	119	75.36	-2.79	0.36	0.964590
3161	2R_DroMel_CAF1	10,798,845 – 10,798,939	- - - - - - - - -	5207	10,798,845 – 10,798,939	-	4	117	77.57	-2.36	0.54	0.904732
3162	2R_DroMel_CAF1	10,803,240 – 10,803,354	- - - - - - - - -	5208	10,803,240 – 10,803,354	+	5	120	88.65	-2.10	0.75	0.850011
3163	2R_DroMel_CAF1	10,803,547 – 10,803,666	- - - - - - - - -	5209	10,803,547 – 10,803,666	-	3	120	94.99	-2.02	0.98	0.925707
3164	2R_DroMel_CAF1	10,807,105 – 10,807,218	- - - - - - - - -	5210	10,807,105 – 10,807,218	-	5	113	90.11	-1.38	0.82	0.590653
3165	2R_DroMel_CAF1	10,809,978 – 10,810,071	- - - - - - - - -	5211	10,809,978 – 10,810,071	-	5	95	90.24	-2.32	0.89	0.998202
3166	2R_DroMel_CAF1	10,819,235 – 10,819,351	- - - - - - - - -	5212	10,819,235 – 10,819,351	+	5	116	95.00	-1.99	0.92	0.997602
3167	2R_DroMel_CAF1	10,819,972 – 10,820,063	- - - - - - - - -	5213	10,819,972 – 10,820,063	+	5	91	92.06	-2.73	0.70	0.686898
3167	2R_DroMel_CAF1	10,819,972 – 10,820,063	- - - - - - - - -	5214	10,819,972 – 10,820,063	-	5	91	92.06	-2.11	0.75	0.825772
3168	2R_DroMel_CAF1	10,824,273 – 10,824,371	- - - - - - - - -	5215	10,824,273 – 10,824,371	+	3	98	93.88	-1.91	0.94	0.823655
3169	2R_DroMel_CAF1	10,828,097 – 10,828,196	- - - - - - - - -	5216	10,828,097 – 10,828,196	-	5	99	99.60	-2.00	1.00	0.993600
3170	2R_DroMel_CAF1	10,829,252 – 10,829,344	- - - - - - - - -	5217	10,829,252 – 10,829,344	+	3	117	64.69	-2.88	0.54	0.999976
3170	2R_DroMel_CAF1	10,829,252 – 10,829,344	- - - - - - - - -	5218	10,829,252 – 10,829,344	-	3	117	64.69	-2.44	0.61	0.999984
3171	2R_DroMel_CAF1	10,829,871 – 10,829,988	- - - "knownCDS=Parent=FBtr0087373, FBtr0087374;Name=mus210-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8153-RC, FlyBase+Annotation+IDs:CG8153-RA" - - - - -	5219	10,829,871 – 10,829,988	+	6	120	74.92	-2.29	0.39	0.844353
3172	2R_DroMel_CAF1	10,833,630 – 10,833,767	- - - "knownCDS=Parent=FBtr0087391;Name=CG8155-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8155-RA" - - - - -	5220	10,833,630 – 10,833,750	+	6	120	79.78	-2.33	0.49	0.697712
				5221	10,833,670 – 10,833,767	+	6	97	76.88	-2.37	0.47	0.918567
				5222	10,833,670 – 10,833,767	-	6	97	76.88	-2.31	0.58	0.967198
3173	2R_DroMel_CAF1	10,834,563 – 10,834,661	- - - "knownCDS=Parent=FBtr0087391;Name=CG8155-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8155-RA" - - - - -	5223	10,834,563 – 10,834,661	-	6	104	76.62	-2.64	0.30	0.711479
3174	2R_DroMel_CAF1	10,836,968 – 10,837,087	- - - - - - - - -	5224	10,836,968 – 10,837,087	+	5	119	91.98	-2.63	0.83	0.997476
3174	2R_DroMel_CAF1	10,836,968 – 10,837,087	- - - - - - - - -	5225	10,836,968 – 10,837,087	-	5	119	91.98	-1.30	0.84	0.583400
3175	2R_DroMel_CAF1	10,838,235 – 10,838,328	- - - - - - - - -	5226	10,838,235 – 10,838,328	+	5	93	96.02	-1.76	0.93	0.992292
3176	2R_DroMel_CAF1	10,851,257 – 10,851,368	- - - - - - - - -	5227	10,851,257 – 10,851,368	+	6	119	79.53	-2.64	0.49	0.883256
3176	2R_DroMel_CAF1	10,851,257 – 10,851,368	- - - - - - - - -	5228	10,851,257 – 10,851,368	-	6	119	79.53	-2.52	0.66	0.951815
3177	2R_DroMel_CAF1	10,852,053 – 10,852,147	- - - - - - - - -	5229	10,852,053 – 10,852,147	+	4	99	80.22	-1.90	0.69	0.836340
3178	2R_DroMel_CAF1	10,855,233 – 10,855,347	- - - - - - - - -	5230	10,855,233 – 10,855,347	+	4	114	98.54	-2.02	0.99	0.831530
3179	2R_DroMel_CAF1	10,867,295 – 10,867,385	- - - - - - - - -	5231	10,867,295 – 10,867,385	+	4	91	87.80	-1.58	0.73	0.610266
3179	2R_DroMel_CAF1	10,867,295 – 10,867,385	- - - - - - - - -	5232	10,867,295 – 10,867,385	-	4	91	87.80	-1.54	0.80	0.640120
3180	2R_DroMel_CAF1	10,867,633 – 10,867,738	- - - - - - - - -	5233	10,867,633 – 10,867,738	+	5	120	89.19	-1.32	0.84	0.521700
3181	2R_DroMel_CAF1	10,869,595 – 10,869,707	- - - - - - - - -	5234	10,869,595 – 10,869,707	-	3	119	86.21	-1.94	0.74	0.576242
3182	2R_DroMel_CAF1	10,869,745 – 10,869,889	- - - - - - - - -	5235	10,869,745 – 10,869,855	+	4	120	80.09	-2.68	0.65	0.989810
				5236	10,869,745 – 10,869,855	-	4	120	80.09	-2.75	0.58	0.975324
				5237	10,869,776 – 10,869,889	+	3	113	95.28	-2.41	0.96	0.956863
				5238	10,869,776 – 10,869,889	-	3	113	95.28	-1.78	0.89	0.563425
3183	2R_DroMel_CAF1	10,877,656 – 10,877,750	- - - - - - - - -	5239	10,877,656 – 10,877,750	-	6	100	89.05	-2.25	0.88	0.969150
3184	2R_DroMel_CAF1	10,879,044 – 10,879,134	- - - - - - - - -	5240	10,879,044 – 10,879,134	+	6	107	76.79	-2.37	0.65	0.980920
3184	2R_DroMel_CAF1	10,879,044 – 10,879,134	- - - - - - - - -	5241	10,879,044 – 10,879,134	-	6	107	76.79	-2.58	0.62	0.986737
3185	2R_DroMel_CAF1	10,880,748 – 10,880,868	- - - "knownCDS=Parent=FBtr0087382;Name=unc-5-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8166-RA" - - - - -	5242	10,880,748 – 10,880,868	+	6	120	80.61	-1.48	0.62	0.506417
3186	2R_DroMel_CAF1	10,882,167 – 10,882,306	- - - - - - - - -	5243	10,882,167 – 10,882,267	-	5	117	86.32	-2.88	0.79	0.994000
3186	2R_DroMel_CAF1	10,882,167 – 10,882,306	- - - - - - - - -	5244	10,882,198 – 10,882,306	-	5	118	94.29	-1.72	0.97	0.996718
3187	2R_DroMel_CAF1	10,899,393 – 10,899,488	- - - "knownCDS=Parent=FBtr0087385;Name=SRPK-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8174-RC" - - - - -	5245	10,899,393 – 10,899,488	-	5	95	90.63	-1.77	0.75	0.651882
3188	2R_DroMel_CAF1	10,900,826 – 10,900,943	- - - - - - - - -	5246	10,900,826 – 10,900,943	+	6	120	79.15	-1.69	0.63	0.766082
3189	2R_DroMel_CAF1	10,908,694 – 10,908,791	- - - - - - - - -	5247	10,908,694 – 10,908,791	+	5	99	97.55	-2.36	0.95	0.999405
3190	2R_DroMel_CAF1	10,910,054 – 10,910,153	- - - - - - - - -	5248	10,910,054 – 10,910,153	-	5	106	76.79	-2.88	0.28	0.997223
3191	2R_DroMel_CAF1	10,912,651 – 10,912,755	- - - - - - - - -	5249	10,912,651 – 10,912,755	+	5	108	73.02	-2.31	0.23	0.986764
3192	2R_DroMel_CAF1	10,920,502 – 10,920,592	- - - - - - - - -	5250	10,920,502 – 10,920,592	-	6	94	80.91	-2.13	0.57	0.695060
3193	2R_DroMel_CAF1	10,927,137 – 10,927,249	- - - - - - - - -	5251	10,927,137 – 10,927,249	+	5	120	91.49	-1.76	0.77	0.729485
3194	2R_DroMel_CAF1	10,929,669 – 10,929,768	- - - - - - - - -	5252	10,929,669 – 10,929,768	+	6	113	75.56	-1.84	0.46	0.515848
3195	2R_DroMel_CAF1	10,931,828 – 10,931,947	- - - - - - - - -	5253	10,931,828 – 10,931,947	+	6	120	73.58	-2.12	0.51	0.953414
3196	2R_DroMel_CAF1	10,934,209 – 10,934,357	- - - - - - - - -	5254	10,934,209 – 10,934,317	+	6	120	82.84	-2.42	0.68	0.758446
3196	2R_DroMel_CAF1	10,934,209 – 10,934,357	- - - - - - - - -	5255	10,934,240 – 10,934,357	+	6	120	85.22	-1.90	0.80	0.650358
3197	2R_DroMel_CAF1	10,934,969 – 10,935,059	- - - - - - - - -	5256	10,934,969 – 10,935,059	-	6	104	75.99	-2.21	0.38	0.654741
3198	2R_DroMel_CAF1	10,940,934 – 10,941,099	- - - - - - - - -	5257	10,940,934 – 10,941,038	+	5	104	99.23	-1.63	1.00	0.963571
				5258	10,940,966 – 10,941,068	+	5	102	98.82	-1.58	1.00	0.961509
				5259	10,940,966 – 10,941,068	-	5	102	98.82	-1.17	0.99	0.573341
				5260	10,940,999 – 10,941,099	+	5	108	92.73	-1.84	0.98	0.998532
3199	2R_DroMel_CAF1	10,944,159 – 10,944,260	- - - - - - - - -	5261	10,944,159 – 10,944,260	+	5	101	86.43	-2.45	0.66	0.774100
3200	2R_DroMel_CAF1	10,945,195 – 10,945,287	- - - - - - - - -	5262	10,945,195 – 10,945,287	+	6	106	78.75	-1.78	0.53	0.508456
3201	2R_DroMel_CAF1	10,949,438 – 10,949,550	- - - - - - - - -	5263	10,949,438 – 10,949,550	-	5	118	82.55	-3.18	0.73	0.996137
3202	2R_DroMel_CAF1	10,954,024 – 10,954,115	- - - - - - - - -	5264	10,954,024 – 10,954,115	+	4	110	79.73	-2.36	0.80	0.988823
3202	2R_DroMel_CAF1	10,954,024 – 10,954,115	- - - - - - - - -	5265	10,954,024 – 10,954,115	-	4	110	79.73	-2.26	0.63	0.937974
3203	2R_DroMel_CAF1	10,955,733 – 10,955,836	- - - - - - - - -	5266	10,955,733 – 10,955,836	-	6	103	80.68	-1.93	0.58	0.641975
3204	2R_DroMel_CAF1	10,957,387 – 10,957,502	- - - - - - - - -	5267	10,957,387 – 10,957,502	+	5	115	95.30	-2.23	0.92	0.999217
3205	2R_DroMel_CAF1	10,958,287 – 10,958,414	- - - - - - - - -	5268	10,958,287 – 10,958,379	+	6	115	78.92	-2.16	0.72	0.947467
				5269	10,958,287 – 10,958,379	-	6	115	78.92	-2.52	0.69	0.966641
				5270	10,958,300 – 10,958,414	+	6	120	80.12	-1.78	0.61	0.680693
				5271	10,958,300 – 10,958,414	-	6	120	80.12	-2.68	0.53	0.894003
3206	2R_DroMel_CAF1	10,958,492 – 10,958,585	- - - - - - - - -	5272	10,958,492 – 10,958,585	+	6	119	71.09	-1.58	0.55	0.801746
3206	2R_DroMel_CAF1	10,958,492 – 10,958,585	- - - - - - - - -	5273	10,958,492 – 10,958,585	-	6	119	71.09	-1.67	0.55	0.874553
3207	2R_DroMel_CAF1	10,959,214 – 10,959,334	- - - - - - - - -	5274	10,959,214 – 10,959,334	-	5	120	68.38	-1.83	0.26	0.530449
3208	2R_DroMel_CAF1	10,961,145 – 10,961,323	- - - - - - - - -	5275	10,961,145 – 10,961,259	-	5	114	92.37	-1.18	0.91	0.645512
3208	2R_DroMel_CAF1	10,961,145 – 10,961,323	- - - - - - - - -	5276	10,961,224 – 10,961,323	-	6	116	77.42	-2.52	0.39	0.796244
3209	2R_DroMel_CAF1	10,961,491 – 10,961,586	- - - - - - - - -	5277	10,961,491 – 10,961,586	+	6	111	80.95	-3.93	0.70	0.969368
3209	2R_DroMel_CAF1	10,961,491 – 10,961,586	- - - - - - - - -	5278	10,961,491 – 10,961,586	-	6	111	80.95	-2.38	0.74	0.916692
3210	2R_DroMel_CAF1	10,961,783 – 10,961,879	- - - - - - - - -	5279	10,961,783 – 10,961,879	-	6	110	74.90	-2.35	0.29	0.581004
3211	2R_DroMel_CAF1	10,962,279 – 10,962,380	- - - - - - - - -	5280	10,962,279 – 10,962,380	+	6	106	95.84	-1.26	0.91	0.829865
3211	2R_DroMel_CAF1	10,962,279 – 10,962,380	- - - - - - - - -	5281	10,962,279 – 10,962,380	-	6	106	95.84	-1.36	0.93	0.942306
3212	2R_DroMel_CAF1	10,974,047 – 10,974,152	- - - - - - - - -	5282	10,974,047 – 10,974,152	+	6	120	78.15	-0.94	0.75	0.573032
3212	2R_DroMel_CAF1	10,974,047 – 10,974,152	- - - - - - - - -	5283	10,974,047 – 10,974,152	-	6	120	78.15	-1.46	0.64	0.699051
3213	2R_DroMel_CAF1	10,974,900 – 10,974,997	- - - - - - - - -	5284	10,974,900 – 10,974,997	-	5	103	95.77	-1.67	0.95	0.990513
3214	2R_DroMel_CAF1	10,975,229 – 10,975,457	- - - - - - - - -	5285	10,975,229 – 10,975,325	+	5	103	76.98	-2.01	0.53	0.854696
				5286	10,975,325 – 10,975,423	+	6	102	76.22	-2.64	0.30	0.758005
				5287	10,975,358 – 10,975,457	+	6	106	78.09	-2.39	0.41	0.695832
3215	2R_DroMel_CAF1	10,976,706 – 10,976,798	- - - - - - - - -	5288	10,976,706 – 10,976,798	+	4	112	87.74	-1.75	0.83	0.808408
3216	2R_DroMel_CAF1	10,977,165 – 10,977,270	- - - - - - - - -	5289	10,977,165 – 10,977,270	-	5	105	89.40	-2.60	0.70	0.810604
3217	2R_DroMel_CAF1	10,984,043 – 10,984,133	- - - "knownCDS=Parent=FBtr0087325;Name=CG8179-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8179-RA" - - - - -	5290	10,984,043 – 10,984,133	+	6	98	78.49	-1.67	0.56	0.557501
3218	2R_DroMel_CAF1	10,990,976 – 10,991,093	- - - "knownCDS=Parent=FBtr0087359;Name=CG8180-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8180-RA" - - - - -	5291	10,990,976 – 10,991,093	+	6	117	78.90	-1.67	0.56	0.511932
3219	2R_DroMel_CAF1	10,995,554 – 10,995,658	- - - - - - - - -	5292	10,995,554 – 10,995,658	-	6	116	75.49	-1.95	0.49	0.772291
3220	2R_DroMel_CAF1	10,996,327 – 10,996,438	- - - - - - - - -	5293	10,996,327 – 10,996,438	+	5	114	79.50	-1.97	0.48	0.582032
3221	2R_DroMel_CAF1	10,996,587 – 10,996,693	- - - - - - - - -	5294	10,996,587 – 10,996,693	+	5	120	75.77	-1.52	0.10	0.686955
3222	2R_DroMel_CAF1	10,999,029 – 10,999,137	- - - - - - - - -	5295	10,999,029 – 10,999,137	+	5	113	90.90	-1.74	0.78	0.760314
3223	2R_DroMel_CAF1	10,999,779 – 10,999,875	- - - - - - - - -	5296	10,999,779 – 10,999,875	+	3	96	92.28	-2.80	0.81	0.827945
3223	2R_DroMel_CAF1	10,999,779 – 10,999,875	- - - - - - - - -	5297	10,999,779 – 10,999,875	-	3	96	92.28	-3.23	0.93	0.988390
3224	2R_DroMel_CAF1	11,000,226 – 11,000,322	- - - - - - - - -	5298	11,000,226 – 11,000,322	+	6	104	77.77	-1.15	0.68	0.579053
3225	2R_DroMel_CAF1	11,004,657 – 11,004,749	- - - "knownCDS=Parent=FBtr0087358;Name=CG12964-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12964-RA" - - - - -	5299	11,004,657 – 11,004,749	-	6	102	82.27	-2.89	0.60	0.827141
3226	2R_DroMel_CAF1	11,008,930 – 11,009,020	- - - - - - - - -	5300	11,008,930 – 11,009,020	+	6	99	77.42	-2.01	0.66	0.948770
3226	2R_DroMel_CAF1	11,008,930 – 11,009,020	- - - - - - - - -	5301	11,008,930 – 11,009,020	-	6	99	77.42	-2.17	0.67	0.967104
3227	2R_DroMel_CAF1	11,014,205 – 11,014,301	- - - - - - - - -	5302	11,014,205 – 11,014,301	+	6	104	81.12	-2.16	0.56	0.636894
3228	2R_DroMel_CAF1	11,015,158 – 11,015,261	- - - "knownCDS=Parent=FBtr0087327;Name=CG12960-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12960-RA" - - - - -	5303	11,015,158 – 11,015,261	+	6	110	76.58	-1.94	0.47	0.610279
3229	2R_DroMel_CAF1	11,029,568 – 11,029,688	- - - "knownCDS=Parent=FBtr0087331, FBtr0087332;Name=GalNAc-T1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8182-RA, FlyBase+Annotation+IDs:CG8182-RB" - - - - -	5304	11,029,568 – 11,029,688	+	6	120	79.67	-2.13	0.56	0.790154
3229	2R_DroMel_CAF1	11,029,568 – 11,029,688		5305	11,029,568 – 11,029,688	-	6	120	79.67	-1.53	0.63	0.619673
3230	2R_DroMel_CAF1	11,032,659 – 11,032,750	- - - - - - - - -	5306	11,032,659 – 11,032,750	-	6	95	79.59	-2.92	0.74	0.968956
3231	2R_DroMel_CAF1	11,040,240 – 11,040,354	- - - "knownCDS=Parent=FBtr0087356;Name=Khc-73-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8183-RB" - - - - -	5307	11,040,240 – 11,040,354	+	6	120	78.48	-2.16	0.58	0.900720
3232	2R_DroMel_CAF1	11,042,299 – 11,042,477	- - - - - - - - -	5308	11,042,299 – 11,042,405	+	6	118	76.47	-2.30	0.40	0.765566
				5309	11,042,339 – 11,042,440	-	5	101	85.64	-1.80	0.71	0.637207
				5310	11,042,366 – 11,042,477	+	5	111	80.09	-2.70	0.56	0.980654
				5311	11,042,366 – 11,042,477	-	5	111	80.09	-2.23	0.73	0.962516
3233	2R_DroMel_CAF1	11,051,246 – 11,051,341	- - - - - - - - -	5312	11,051,246 – 11,051,341	+	6	97	72.62	-2.22	0.62	0.989809
3233	2R_DroMel_CAF1	11,051,246 – 11,051,341	- - - - - - - - -	5313	11,051,246 – 11,051,341	-	6	97	72.62	-2.18	0.51	0.972184
3234	2R_DroMel_CAF1	11,053,724 – 11,053,844	- - - "knownCDS=Parent=FBtr0087334;Name=CG30467-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30467-RA" - - - - -	5314	11,053,724 – 11,053,844	+	6	120	80.11	-1.57	0.67	0.723127
3235	2R_DroMel_CAF1	11,054,641 – 11,054,731	- - - "knownCDS=Parent=FBtr0087334;Name=CG30467-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30467-RA" - - - - -	5315	11,054,641 – 11,054,731	-	6	90	87.33	-2.38	0.81	0.767510
3236	2R_DroMel_CAF1	11,056,225 – 11,056,358	- - - - - - - - -	5316	11,056,225 – 11,056,322	+	6	99	83.75	-3.19	0.71	0.858705
				5317	11,056,225 – 11,056,322	-	6	99	83.75	-2.68	0.62	0.589027
				5318	11,056,246 – 11,056,358	+	6	112	74.93	-1.96	0.41	0.559616
				5319	11,056,246 – 11,056,358	-	6	112	74.93	-2.85	0.26	0.882946
3237	2R_DroMel_CAF1	11,058,475 – 11,058,566	- - - - - - - - -	5320	11,058,475 – 11,058,566	+	6	104	74.83	-1.69	0.49	0.528443
3238	2R_DroMel_CAF1	11,059,513 – 11,059,621	- - - "knownCDS=Parent=FBtr0087354;Name=CG8192-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8192-RA" - - - - -	5321	11,059,513 – 11,059,621	+	6	108	82.53	-1.71	0.76	0.697826
3239	2R_DroMel_CAF1	11,060,646 – 11,060,766	- - - "knownCDS=Parent=FBtr0087354;Name=CG8192-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8192-RA" - - - - -	5322	11,060,646 – 11,060,766	-	6	120	71.55	-1.86	0.43	0.759899
3240	2R_DroMel_CAF1	11,066,492 – 11,066,596	- - - - - - - - -	5323	11,066,492 – 11,066,596	-	3	104	98.72	-1.77	1.00	0.818797
3241	2R_DroMel_CAF1	11,068,917 – 11,069,008	- - - - - - - - -	5324	11,068,917 – 11,069,008	-	6	115	80.27	-1.22	0.70	0.574571
3242	2R_DroMel_CAF1	11,074,451 – 11,074,559	- - - - - - - - -	5325	11,074,451 – 11,074,559	+	5	120	88.03	-1.53	0.87	0.770029
3243	2R_DroMel_CAF1	11,081,166 – 11,081,257	- - - - - - - - -	5326	11,081,166 – 11,081,257	+	5	91	99.12	-1.61	1.00	0.960717
3243	2R_DroMel_CAF1	11,081,166 – 11,081,257	- - - - - - - - -	5327	11,081,166 – 11,081,257	-	5	91	99.12	-1.38	1.00	0.845285
3244	2R_DroMel_CAF1	11,081,926 – 11,082,046	- - - "knownCDS=Parent=FBtr0087351, FBtr0087352;Name=Flo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8200-RA, FlyBase+Annotation+IDs:CG8200-RB" - - - - -	5328	11,081,926 – 11,082,046	-	6	120	78.77	-1.75	0.65	0.835438
3245	2R_DroMel_CAF1	11,084,620 – 11,084,722	- - - - - - - - -	5329	11,084,620 – 11,084,722	+	4	103	86.18	-1.50	0.78	0.596609
3246	2R_DroMel_CAF1	11,089,083 – 11,089,184	- - - - - - - - -	5330	11,089,083 – 11,089,184	-	4	107	79.52	-1.72	0.62	0.524696
3247	2R_DroMel_CAF1	11,092,413 – 11,092,513	- - - - - - - - -	5331	11,092,413 – 11,092,513	-	6	110	81.38	-1.52	0.65	0.549161
3248	2R_DroMel_CAF1	11,095,274 – 11,095,370	- - - - - - - - -	5332	11,095,274 – 11,095,370	-	4	99	69.41	-2.14	0.66	0.998194
3249	2R_DroMel_CAF1	11,101,372 – 11,101,467	- - - - - - - - -	5333	11,101,372 – 11,101,467	-	6	113	76.51	-2.19	0.38	0.557630
3250	2R_DroMel_CAF1	11,103,528 – 11,103,669	- - - - - - - - -	5334	11,103,528 – 11,103,635	+	5	118	74.04	-2.55	0.55	0.997258
3250	2R_DroMel_CAF1	11,103,528 – 11,103,669	- - - - - - - - -	5335	11,103,568 – 11,103,669	+	4	109	79.71	-1.69	0.85	0.865258
3251	2R_DroMel_CAF1	11,104,504 – 11,104,607	- - - - - - - - -	5336	11,104,504 – 11,104,607	-	6	107	65.47	-2.62	0.26	0.940261
3252	2R_DroMel_CAF1	11,107,742 – 11,107,841	- - - - - - - - -	5337	11,107,742 – 11,107,841	+	6	100	77.45	-1.77	0.57	0.744093
3253	2R_DroMel_CAF1	11,112,622 – 11,112,712	- - - - - - - - -	5338	11,112,622 – 11,112,712	-	6	118	79.00	-1.29	0.68	0.645835
3254	2R_DroMel_CAF1	11,113,558 – 11,113,649	- - - - - - - - -	5339	11,113,558 – 11,113,649	-	6	100	77.07	-1.52	0.59	0.610662
3255	2R_DroMel_CAF1	11,116,665 – 11,116,758	- - - - - - - - -	5340	11,116,665 – 11,116,758	+	4	106	89.15	-1.40	0.92	0.671030
3256	2R_DroMel_CAF1	11,129,793 – 11,129,883	- - - - - - - - -	5341	11,129,793 – 11,129,883	-	5	93	93.38	-1.59	0.91	0.973571
3257	2R_DroMel_CAF1	11,135,725 – 11,135,817	- - - - - - - - -	5342	11,135,725 – 11,135,817	+	6	111	69.76	-1.35	0.54	0.544002
3258	2R_DroMel_CAF1	11,140,957 – 11,141,049	- - - - - - - - -	5343	11,140,957 – 11,141,049	+	6	105	73.34	-3.81	0.64	0.996608
3258	2R_DroMel_CAF1	11,140,957 – 11,141,049	- - - - - - - - -	5344	11,140,957 – 11,141,049	-	6	105	73.34	-2.61	0.46	0.992055
3259	2R_DroMel_CAF1	11,145,770 – 11,145,860	- - - - - - - - -	5345	11,145,770 – 11,145,860	+	6	91	96.12	-1.28	0.95	0.950524
3260	2R_DroMel_CAF1	11,146,433 – 11,146,525	- - - - - - - - -	5346	11,146,433 – 11,146,525	+	6	106	84.07	-2.05	0.68	0.522439
3261	2R_DroMel_CAF1	11,148,281 – 11,148,375	- - - - - - - - -	5347	11,148,281 – 11,148,375	+	6	114	77.50	-2.63	0.55	0.976530
3261	2R_DroMel_CAF1	11,148,281 – 11,148,375	- - - - - - - - -	5348	11,148,281 – 11,148,375	-	6	114	77.50	-2.23	0.46	0.771918
3262	2R_DroMel_CAF1	11,152,259 – 11,152,366	- - - - - - - - -	5349	11,152,259 – 11,152,366	+	6	109	76.70	-2.56	0.44	0.941506
3262	2R_DroMel_CAF1	11,152,259 – 11,152,366	- - - - - - - - -	5350	11,152,259 – 11,152,366	-	6	109	76.70	-2.55	0.41	0.913812
3263	2R_DroMel_CAF1	11,157,152 – 11,157,244	- - - - - - - - -	5351	11,157,152 – 11,157,244	-	6	97	78.59	-1.97	0.50	0.577124
3264	2R_DroMel_CAF1	11,157,897 – 11,158,015	- - - - - - - - -	5352	11,157,897 – 11,158,015	+	3	118	91.45	-1.89	0.86	0.617543
3265	2R_DroMel_CAF1	11,158,169 – 11,158,290	- - - - - - - - -	5353	11,158,169 – 11,158,259	+	5	102	82.47	-2.01	0.67	0.799389
				5354	11,158,169 – 11,158,259	-	5	102	82.47	-2.13	0.73	0.908395
				5355	11,158,196 – 11,158,290	+	5	97	86.80	-4.11	0.83	0.999638
				5356	11,158,196 – 11,158,290	-	5	97	86.80	-3.93	0.80	0.999252
3266	2R_DroMel_CAF1	11,171,922 – 11,172,039	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002259; Name=dme-mir-278" - "RNAmicro=f:11171922_t:11172041_strand:-_p:0.972265" - - - "miRBase=dme-mir-278\|9e-52" - "Flybase=FBgn0082178:mir-278:microRNA_encoding_gene\|8e-07"	5357	11,171,922 – 11,172,019	+	6	120	81.41	-2.94	0.92	0.982806
				5358	11,171,922 – 11,172,019	-	6	120	81.41	-2.21	0.84	0.922107
				5359	11,171,942 – 11,172,039	+	6	120	80.56	-1.52	0.86	0.802167
				5360	11,171,942 – 11,172,039	-	6	120	80.56	-1.74	0.75	0.835726
3267	2R_DroMel_CAF1	11,173,160 – 11,173,274	- - - "knownCDS=Parent=FBtr0087345;Name=fus-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8205-RC" - - - - -	5361	11,173,160 – 11,173,274	+	6	117	80.94	-1.59	0.61	0.500000
3268	2R_DroMel_CAF1	11,173,631 – 11,173,731	- - - "knownCDS=Parent=FBtr0087345;Name=fus-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8205-RC" - - - - -	5362	11,173,631 – 11,173,731	-	6	100	84.20	-2.28	0.80	0.816660
3269	2R_DroMel_CAF1	11,177,309 – 11,177,415	- - - "knownCDS=Parent=FBtr0087347;Name=fus-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8205-RB" - - - - -	5363	11,177,309 – 11,177,415	+	6	106	78.36	-1.88	0.56	0.741812
3270	2R_DroMel_CAF1	11,177,486 – 11,177,590	- - - "knownCDS=Parent=FBtr0087347;Name=fus-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8205-RB" - - - - -	5364	11,177,486 – 11,177,590	+	6	105	79.85	-2.61	0.56	0.918696
3270	2R_DroMel_CAF1	11,177,486 – 11,177,590		5365	11,177,486 – 11,177,590	-	6	105	79.85	-2.02	0.62	0.829591
3271	2R_DroMel_CAF1	11,177,705 – 11,177,815	- - - "knownCDS=Parent=FBtr0087347;Name=fus-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8205-RB" - - - - -	5366	11,177,705 – 11,177,815	-	6	117	76.02	-1.10	0.66	0.529602
3272	2R_DroMel_CAF1	11,182,216 – 11,182,309	- - - - - - - - -	5367	11,182,216 – 11,182,309	-	5	113	80.64	-2.31	0.60	0.919312
3273	2R_DroMel_CAF1	11,183,769 – 11,183,903	- - - - - - - - -	5368	11,183,769 – 11,183,877	-	6	118	80.11	-1.67	0.63	0.670630
3273	2R_DroMel_CAF1	11,183,769 – 11,183,903	- - - - - - - - -	5369	11,183,802 – 11,183,903	-	6	108	75.86	-1.52	0.69	0.903370
3274	2R_DroMel_CAF1	11,187,280 – 11,187,375	- - - - - - - - -	5370	11,187,280 – 11,187,375	+	6	97	80.80	-1.40	0.74	0.679594
3275	2R_DroMel_CAF1	11,188,664 – 11,188,760	- - - - - - - - -	5371	11,188,664 – 11,188,760	-	5	110	68.19	-2.24	0.29	0.938016
3276	2R_DroMel_CAF1	11,194,210 – 11,194,309	- - - - - - - - -	5372	11,194,210 – 11,194,309	-	5	119	76.55	-2.12	0.49	0.904950
3277	2R_DroMel_CAF1	11,195,009 – 11,195,107	- - - - - - - - -	5373	11,195,009 – 11,195,107	+	3	104	65.03	-1.37	0.58	0.838265
3278	2R_DroMel_CAF1	11,199,957 – 11,200,077	- - - - - - - - -	5374	11,199,957 – 11,200,077	+	5	120	89.75	-1.48	0.79	0.598111
3279	2R_DroMel_CAF1	11,202,593 – 11,202,706	- - - "knownCDS=Parent=FBtr0087320;Name=CG8214-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8214-RA" - - - - -	5375	11,202,593 – 11,202,706	+	6	113	78.11	-1.63	0.60	0.707852
3280	2R_DroMel_CAF1	11,203,298 – 11,203,418	- - - "knownCDS=Parent=FBtr0087320;Name=CG8214-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8214-RA" - - - - -	5376	11,203,298 – 11,203,418	+	6	120	74.44	-1.81	0.47	0.616646
3281	2R_DroMel_CAF1	11,208,546 – 11,208,651	- - - - - - - - -	5377	11,208,546 – 11,208,651	+	5	120	66.14	-1.60	0.60	0.889621
3282	2R_DroMel_CAF1	11,210,335 – 11,210,455	- - - "knownCDS=Parent=FBtr0089860;Name=CG33461-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33461-RA" - - - - -	5378	11,210,335 – 11,210,455	-	3	120	72.78	-1.56	0.62	0.821269
3283	2R_DroMel_CAF1	11,213,434 – 11,213,544	- - - - - - - - -	5379	11,213,434 – 11,213,544	-	5	120	88.97	-2.52	0.79	0.982306
3284	2R_DroMel_CAF1	11,214,339 – 11,214,433	- - - - - - - - -	5380	11,214,339 – 11,214,433	+	5	99	76.24	-1.95	0.49	0.789036
3285	2R_DroMel_CAF1	11,214,523 – 11,214,641	- - - - - - - - -	5381	11,214,523 – 11,214,641	-	5	120	72.00	-1.89	0.61	0.953090
3286	2R_DroMel_CAF1	11,215,639 – 11,215,751	- - - - - - - - -	5382	11,215,639 – 11,215,751	+	6	120	77.09	-1.86	0.59	0.855935
3287	2R_DroMel_CAF1	11,217,616 – 11,217,722	- - - - - - - - -	5383	11,217,616 – 11,217,722	-	6	106	80.23	-1.37	0.67	0.594220
3288	2R_DroMel_CAF1	11,224,433 – 11,224,539	- - - - - - - - -	5384	11,224,433 – 11,224,539	-	6	120	91.22	-2.41	0.80	0.652531
3289	2R_DroMel_CAF1	11,229,113 – 11,229,214	- - - - - - - - -	5385	11,229,113 – 11,229,214	+	4	113	92.04	-2.29	0.84	0.940215
3289	2R_DroMel_CAF1	11,229,113 – 11,229,214	- - - - - - - - -	5386	11,229,113 – 11,229,214	-	4	113	92.04	-4.05	0.74	0.749836
3290	2R_DroMel_CAF1	11,229,618 – 11,229,712	- - - - - - - - -	5387	11,229,618 – 11,229,712	+	5	94	96.06	-1.10	0.93	0.535991
3291	2R_DroMel_CAF1	11,230,780 – 11,230,870	- - - - - - - - -	5388	11,230,780 – 11,230,870	-	4	90	90.74	-2.46	0.93	0.992243
3292	2R_DroMel_CAF1	11,231,393 – 11,231,492	- - - - - - - - -	5389	11,231,393 – 11,231,492	+	6	105	77.21	-1.87	0.48	0.518293
3293	2R_DroMel_CAF1	11,233,931 – 11,234,044	- - - - - - - - -	5390	11,233,931 – 11,234,044	+	6	120	83.40	-1.79	0.73	0.610761
3294	2R_DroMel_CAF1	11,238,516 – 11,238,612	- - - - - - - - -	5391	11,238,516 – 11,238,612	+	5	96	87.95	-1.70	0.89	0.922845
3295	2R_DroMel_CAF1	11,238,938 – 11,239,106	- - - - - - - - -	5392	11,238,938 – 11,239,035	+	6	114	68.40	-2.19	0.36	0.939843
				5393	11,238,938 – 11,239,035	-	6	114	68.40	-2.56	0.33	0.984242
				5394	11,238,964 – 11,239,066	+	6	113	74.73	-2.11	0.50	0.919857
				5395	11,238,964 – 11,239,066	-	6	113	74.73	-2.62	0.54	0.992694
				5396	11,239,002 – 11,239,106	+	6	120	79.27	-2.28	0.46	0.627051
				5397	11,239,002 – 11,239,106	-	6	120	79.27	-2.31	0.46	0.641714
3296	2R_DroMel_CAF1	11,243,821 – 11,243,928	- - - - - - - - -	5398	11,243,821 – 11,243,928	+	5	109	96.47	-1.41	0.85	0.610562
3297	2R_DroMel_CAF1	11,246,230 – 11,246,333	- - - - - - - - -	5399	11,246,230 – 11,246,333	-	4	114	89.26	-2.45	0.72	0.847230
3298	2R_DroMel_CAF1	11,247,900 – 11,247,993	- - - - - - - - -	5400	11,247,900 – 11,247,993	+	5	98	89.47	-2.00	0.91	0.993091
3298	2R_DroMel_CAF1	11,247,900 – 11,247,993	- - - - - - - - -	5401	11,247,900 – 11,247,993	-	5	98	89.47	-1.36	0.81	0.517721
3299	2R_DroMel_CAF1	11,248,091 – 11,248,193	- - - - - - - - -	5402	11,248,091 – 11,248,193	+	6	102	92.81	-1.29	0.91	0.760144
3300	2R_DroMel_CAF1	11,250,456 – 11,250,604	- - - "knownCDS=Parent=FBtr0087285;Name=CG30089-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30089-RA" - - - - -	5403	11,250,456 – 11,250,569	+	6	120	78.18	-1.74	0.66	0.870300
3300	2R_DroMel_CAF1	11,250,456 – 11,250,604		5404	11,250,489 – 11,250,604	+	6	120	76.37	-1.28	0.61	0.500000
3301	2R_DroMel_CAF1	11,250,786 – 11,250,882	- - - "knownCDS=Parent=FBtr0087285;Name=CG30089-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30089-RA" - - - - -	5405	11,250,786 – 11,250,882	+	6	96	78.33	-1.53	0.58	0.517712
3301	2R_DroMel_CAF1	11,250,786 – 11,250,882		5406	11,250,786 – 11,250,882	-	6	96	78.33	-1.87	0.52	0.584658
3302	2R_DroMel_CAF1	11,252,096 – 11,252,191	- - - - - - - - -	5407	11,252,096 – 11,252,191	-	5	95	85.68	-1.98	0.68	0.680835
3303	2R_DroMel_CAF1	11,254,780 – 11,254,875	- - - - - - - - -	5408	11,254,780 – 11,254,875	+	6	109	81.45	-1.81	0.70	0.751213
3304	2R_DroMel_CAF1	11,260,465 – 11,260,572	- - - - - - - - -	5409	11,260,465 – 11,260,572	-	4	108	96.12	-2.09	0.94	0.925347
3305	2R_DroMel_CAF1	11,272,523 – 11,272,634	- - - - - - - - -	5410	11,272,523 – 11,272,634	-	6	113	80.52	-1.54	0.72	0.750204
3306	2R_DroMel_CAF1	11,274,596 – 11,274,689	- - - - - - - - -	5411	11,274,596 – 11,274,689	-	6	104	77.66	-2.04	0.47	0.592636
3307	2R_DroMel_CAF1	11,275,091 – 11,275,183	- - - - - - - - -	5412	11,275,091 – 11,275,183	+	6	95	83.92	-2.52	0.68	0.655601
3308	2R_DroMel_CAF1	11,275,814 – 11,275,919	- - - "knownCDS=Parent=FBtr0087285;Name=CG30089-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30089-RA" - - - - -	5413	11,275,814 – 11,275,919	-	6	105	78.88	-1.46	0.71	0.801577
3309	2R_DroMel_CAF1	11,280,221 – 11,280,317	- - - - - - - - -	5414	11,280,221 – 11,280,317	+	5	108	72.35	-1.99	0.67	0.986202
3309	2R_DroMel_CAF1	11,280,221 – 11,280,317	- - - - - - - - -	5415	11,280,221 – 11,280,317	-	5	108	72.35	-2.30	0.57	0.993296
3310	2R_DroMel_CAF1	11,289,630 – 11,289,727	- - - "knownCDS=Parent=FBtr0087315;Name=tun-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30084-RC" - - - - -	5416	11,289,630 – 11,289,727	+	4	99	83.16	-1.74	0.65	0.608754
3311	2R_DroMel_CAF1	11,289,982 – 11,290,076	- - - "knownCDS=Parent=FBtr0087315;Name=tun-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30084-RC" - - - - -	5417	11,289,982 – 11,290,076	-	6	97	90.25	-3.01	0.79	0.824590
3312	2R_DroMel_CAF1	11,295,750 – 11,295,845	- - - - - - - - -	5418	11,295,750 – 11,295,845	+	6	102	81.29	-1.62	0.62	0.535337
3313	2R_DroMel_CAF1	11,296,091 – 11,296,217	- - "RNAmicro=f:11296124_t:11296224_strand:+_p:0.969910" - - - - - -	5419	11,296,091 – 11,296,186	+	5	95	93.58	-3.32	0.79	0.994602
				5420	11,296,091 – 11,296,186	-	5	95	93.58	-3.37	0.89	0.999936
				5421	11,296,124 – 11,296,217	+	6	101	79.37	-3.41	0.51	0.982262
				5422	11,296,124 – 11,296,217	-	6	101	79.37	-4.49	0.65	0.986848
3314	2R_DroMel_CAF1	11,296,621 – 11,296,724	- - - "knownCDS=Parent=FBtr0087315, FBtr0087313;Name=tun-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30084-RC, FlyBase+Annotation+IDs:CG30084-RA" - - - - -	5423	11,296,621 – 11,296,724	-	6	117	88.17	-1.32	0.92	0.691496
3315	2R_DroMel_CAF1	11,299,339 – 11,299,468	- - - - - - - - -	5424	11,299,339 – 11,299,448	-	6	115	72.81	-1.89	0.50	0.874052
3315	2R_DroMel_CAF1	11,299,339 – 11,299,468	- - - - - - - - -	5425	11,299,375 – 11,299,468	-	6	115	76.16	-1.95	0.50	0.775514
3316	2R_DroMel_CAF1	11,299,605 – 11,299,707	- - - - - - - - -	5426	11,299,605 – 11,299,707	+	6	107	79.91	-1.52	0.66	0.683590
3317	2R_DroMel_CAF1	11,303,006 – 11,303,100	- - - - - - - - -	5427	11,303,006 – 11,303,100	+	4	94	92.55	-1.84	0.84	0.796925
3317	2R_DroMel_CAF1	11,303,006 – 11,303,100	- - - - - - - - -	5428	11,303,006 – 11,303,100	-	4	94	92.55	-1.89	0.82	0.792919
3318	2R_DroMel_CAF1	11,305,437 – 11,305,558	- - - - - - - - -	5429	11,305,437 – 11,305,540	+	5	107	87.18	-2.21	0.76	0.923000
				5430	11,305,437 – 11,305,540	-	5	107	87.18	-2.57	0.67	0.823985
				5431	11,305,464 – 11,305,558	+	5	98	84.70	-2.20	0.67	0.797080
3319	2R_DroMel_CAF1	11,305,582 – 11,305,674	- - - - - - - - -	5432	11,305,582 – 11,305,674	-	5	93	91.50	-1.30	0.83	0.563704
3320	2R_DroMel_CAF1	11,306,934 – 11,307,046	- - - - - - - - -	5433	11,306,934 – 11,307,046	-	5	112	96.70	-1.19	0.92	0.620128
3321	2R_DroMel_CAF1	11,309,385 – 11,309,495	- - - - - - - - -	5434	11,309,385 – 11,309,495	-	6	111	81.33	-1.88	0.58	0.553841
3322	2R_DroMel_CAF1	11,322,530 – 11,322,641	- - - - - - - - -	5435	11,322,530 – 11,322,641	-	6	114	76.33	-1.25	0.68	0.745475
3323	2R_DroMel_CAF1	11,323,273 – 11,323,384	- - - - - - - - -	5436	11,323,273 – 11,323,384	-	5	119	66.46	-1.71	0.45	0.653202
3324	2R_DroMel_CAF1	11,324,249 – 11,324,340	- - - - - - - - -	5437	11,324,249 – 11,324,340	-	6	109	84.81	-2.97	0.76	0.853624
3325	2R_DroMel_CAF1	11,324,897 – 11,324,988	- - - - - - - - -	5438	11,324,897 – 11,324,988	+	3	94	93.17	-3.48	0.86	0.953714
3326	2R_DroMel_CAF1	11,331,217 – 11,331,363	- - - - - - - - -	5439	11,331,217 – 11,331,328	+	5	112	93.09	-2.73	0.93	0.999951
				5440	11,331,217 – 11,331,328	-	5	112	93.09	-2.06	0.94	0.999273
				5441	11,331,249 – 11,331,363	-	5	115	89.04	-1.39	0.86	0.649417
3327	2R_DroMel_CAF1	11,332,666 – 11,332,764	- - - - - - - - -	5442	11,332,666 – 11,332,764	-	3	98	86.85	-1.87	0.85	0.719979
3328	2R_DroMel_CAF1	11,333,199 – 11,333,308	- - - - - - - - -	5443	11,333,199 – 11,333,308	+	5	120	76.01	-2.11	0.29	0.926278
3329	2R_DroMel_CAF1	11,336,387 – 11,336,507	- - - - - - - - -	5444	11,336,387 – 11,336,507	-	4	120	82.22	-2.07	0.59	0.662874
3330	2R_DroMel_CAF1	11,336,966 – 11,337,096	- - - - - - - - -	5445	11,336,966 – 11,337,056	-	5	99	81.82	-2.62	0.79	0.990033
3330	2R_DroMel_CAF1	11,336,966 – 11,337,096	- - - - - - - - -	5446	11,336,997 – 11,337,096	-	5	99	94.44	-2.41	0.91	0.999624
3331	2R_DroMel_CAF1	11,338,802 – 11,338,916	- - - - - - - - -	5447	11,338,802 – 11,338,916	-	5	117	93.92	-2.34	0.77	0.917087
3332	2R_DroMel_CAF1	11,339,040 – 11,339,293	- - - - - - - - -	5448	11,339,040 – 11,339,154	+	6	114	81.97	-2.77	0.62	0.849722
				5449	11,339,040 – 11,339,154	-	6	114	81.97	-2.58	0.54	0.677783
				5450	11,339,080 – 11,339,194	+	5	114	92.46	-2.95	0.77	0.979674
				5451	11,339,080 – 11,339,194	-	5	114	92.46	-2.16	0.74	0.764310
				5452	11,339,154 – 11,339,270	+	4	120	83.47	-2.44	0.78	0.975569
				5453	11,339,154 – 11,339,270	-	4	120	83.47	-2.28	0.60	0.778677
				5454	11,339,194 – 11,339,293	-	4	103	76.57	-2.30	0.55	0.932848
3333	2R_DroMel_CAF1	11,339,908 – 11,340,016	- - - - - - - - -	5455	11,339,908 – 11,340,016	+	4	116	87.44	-1.57	0.75	0.627639
3334	2R_DroMel_CAF1	11,340,271 – 11,340,417	- - - - - - - - -	5456	11,340,271 – 11,340,381	+	4	115	89.33	-1.52	0.84	0.660911
3334	2R_DroMel_CAF1	11,340,271 – 11,340,417	- - - - - - - - -	5457	11,340,306 – 11,340,417	-	4	120	82.82	-1.59	0.73	0.615249
3335	2R_DroMel_CAF1	11,340,546 – 11,340,665	- - - - - - - - -	5458	11,340,546 – 11,340,665	+	4	120	95.68	-1.85	0.86	0.671006
3336	2R_DroMel_CAF1	11,341,128 – 11,341,245	- - - - - - - - -	5459	11,341,128 – 11,341,245	+	4	117	98.58	-2.19	0.99	0.891498
3337	2R_DroMel_CAF1	11,342,678 – 11,342,770	- - - "knownCDS=Parent=FBtr0087311;Name=Poxn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8246-RA" - - - - -	5460	11,342,678 – 11,342,770	-	6	95	79.53	-2.34	0.72	0.947635
3338	2R_DroMel_CAF1	11,344,025 – 11,344,123	- - - - - - - - -	5461	11,344,025 – 11,344,123	+	5	98	73.32	-1.71	0.29	0.608027
3339	2R_DroMel_CAF1	11,349,473 – 11,349,565	- - - - - - - - -	5462	11,349,473 – 11,349,565	+	4	95	86.99	-2.09	0.71	0.823299
3339	2R_DroMel_CAF1	11,349,473 – 11,349,565	- - - - - - - - -	5463	11,349,473 – 11,349,565	-	4	95	86.99	-1.69	0.72	0.669951
3340	2R_DroMel_CAF1	11,349,844 – 11,349,935	- - - - - - - - -	5464	11,349,844 – 11,349,935	+	5	94	95.70	-2.50	0.87	0.998270
3341	2R_DroMel_CAF1	11,352,825 – 11,352,917	- - - - - - - - -	5465	11,352,825 – 11,352,917	-	6	94	91.51	-1.79	0.85	0.763290
3342	2R_DroMel_CAF1	11,353,174 – 11,353,274	- - - - - - - - -	5466	11,353,174 – 11,353,274	+	5	100	88.31	-1.71	0.90	0.936994
3343	2R_DroMel_CAF1	11,354,372 – 11,354,488	- - - - - - - - -	5467	11,354,372 – 11,354,488	-	4	116	90.37	-1.66	0.79	0.665021
3344	2R_DroMel_CAF1	11,356,139 – 11,356,239	- - - - - - - - -	5468	11,356,139 – 11,356,239	-	5	114	81.71	-1.67	0.69	0.619218
3345	2R_DroMel_CAF1	11,357,746 – 11,357,854	- - - - - - - - -	5469	11,357,746 – 11,357,854	-	4	108	89.46	-1.82	0.91	0.920795
3346	2R_DroMel_CAF1	11,362,870 – 11,363,062	- - - - - - - - -	5470	11,362,870 – 11,362,969	+	5	111	81.61	-2.50	0.34	0.680453
3346	2R_DroMel_CAF1	11,362,870 – 11,363,062	- - - - - - - - -	5471	11,362,969 – 11,363,062	+	5	93	74.54	-1.91	0.38	0.795572
3347	2R_DroMel_CAF1	11,365,537 – 11,365,645	- - - - - - - - -	5472	11,365,537 – 11,365,645	+	6	111	78.16	-0.90	0.79	0.583958
3348	2R_DroMel_CAF1	11,368,068 – 11,368,170	- - - - - - - - -	5473	11,368,068 – 11,368,170	-	5	116	88.28	-1.47	0.82	0.613508
3349	2R_DroMel_CAF1	11,369,516 – 11,369,609	- - - - - - - - -	5474	11,369,516 – 11,369,609	+	6	112	71.14	-2.11	0.47	0.958972
3349	2R_DroMel_CAF1	11,369,516 – 11,369,609	- - - - - - - - -	5475	11,369,516 – 11,369,609	-	6	112	71.14	-2.56	0.61	0.996056
3350	2R_DroMel_CAF1	11,372,119 – 11,372,231	- - - "knownCDS=Parent=FBtr0087289;Name=CG12970-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12970-RB" - - - - -	5476	11,372,119 – 11,372,231	+	6	120	73.84	-1.68	0.63	0.931351
3351	2R_DroMel_CAF1	11,377,579 – 11,377,681	- - - - - - - - -	5477	11,377,579 – 11,377,681	+	5	103	98.44	-1.64	0.94	0.951700
3352	2R_DroMel_CAF1	11,378,255 – 11,378,362	- - - - - - - - -	5478	11,378,255 – 11,378,362	-	5	110	82.69	-1.89	0.71	0.779728
3353	2R_DroMel_CAF1	11,378,460 – 11,378,567	- - - - - - - - -	5479	11,378,460 – 11,378,567	+	5	120	91.34	-1.57	0.80	0.723676
3354	2R_DroMel_CAF1	11,379,756 – 11,379,996	- - "RNAmicro=f:11379756_t:11379875_strand:-_p:0.872145" "knownCDS=Parent=FBtr0087306;Name=CG30085-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30085-RA" - - - - -	5480	11,379,756 – 11,379,876	+	5	120	91.42	-3.27	0.88	0.999896
				5481	11,379,756 – 11,379,876	-	5	120	91.42	-3.34	0.79	0.996937
				5482	11,379,796 – 11,379,916	+	5	120	93.42	-1.91	0.89	0.993187
				5483	11,379,876 – 11,379,996	-	5	120	92.50	-1.54	0.85	0.873733
3355	2R_DroMel_CAF1	11,380,316 – 11,380,436	- - - "knownCDS=Parent=FBtr0087306;Name=CG30085-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30085-RA" - - - - -	5484	11,380,316 – 11,380,436	-	5	120	92.00	-2.27	0.82	0.988405
3356	2R_DroMel_CAF1	11,380,832 – 11,380,987	- - "RNAmicro=f:11380867_t:11380986_strand:+_p:0.551819" "knownCDS=Parent=FBtr0087306;Name=CG30085-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30085-RA" - - - - -	5485	11,380,832 – 11,380,947	+	4	120	88.51	-2.87	0.85	0.990442
3356	2R_DroMel_CAF1	11,380,832 – 11,380,987		5486	11,380,867 – 11,380,987	+	4	120	91.53	-2.00	0.87	0.922915
3357	2R_DroMel_CAF1	11,386,158 – 11,386,273	- - - - - - - - -	5487	11,386,158 – 11,386,273	+	4	115	94.99	-1.54	0.89	0.601129
3357	2R_DroMel_CAF1	11,386,158 – 11,386,273	- - - - - - - - -	5488	11,386,158 – 11,386,273	-	4	115	94.99	-1.66	0.91	0.743139
3358	2R_DroMel_CAF1	11,388,259 – 11,388,351	- - - "knownCDS=Parent=FBtr0087304;Name=sli-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8355-RB" - - - - -	5489	11,388,259 – 11,388,351	-	6	103	75.92	-1.26	0.63	0.548651
3359	2R_DroMel_CAF1	11,388,382 – 11,388,528	- - - "knownCDS=Parent=FBtr0087303;Name=sli-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8355-RC" - - - - -	5490	11,388,382 – 11,388,488	-	6	120	76.95	-1.91	0.74	0.964396
3359	2R_DroMel_CAF1	11,388,382 – 11,388,528		5491	11,388,408 – 11,388,528	-	6	120	88.72	-1.95	0.85	0.819602
3360	2R_DroMel_CAF1	11,392,566 – 11,392,660	- - - - - - - - -	5492	11,392,566 – 11,392,660	+	5	96	84.35	-2.25	0.63	0.765703
3360	2R_DroMel_CAF1	11,392,566 – 11,392,660	- - - - - - - - -	5493	11,392,566 – 11,392,660	-	5	96	84.35	-2.34	0.59	0.691019
3361	2R_DroMel_CAF1	11,393,168 – 11,393,281	- - - - - - - - -	5494	11,393,168 – 11,393,281	+	6	120	76.21	-1.65	0.71	0.939340
3361	2R_DroMel_CAF1	11,393,168 – 11,393,281	- - - - - - - - -	5495	11,393,168 – 11,393,281	-	6	120	76.21	-1.53	0.69	0.899801
3362	2R_DroMel_CAF1	11,393,344 – 11,393,436	- - - - - - - - -	5496	11,393,344 – 11,393,436	-	6	109	79.16	-2.44	0.54	0.899827
3363	2R_DroMel_CAF1	11,396,136 – 11,396,234	- - - - - - - - -	5497	11,396,136 – 11,396,234	+	4	100	90.07	-1.60	0.88	0.775065
3364	2R_DroMel_CAF1	11,398,948 – 11,399,041	- - - - - - - - -	5498	11,398,948 – 11,399,041	-	6	109	71.26	-1.91	0.37	0.658036
3365	2R_DroMel_CAF1	11,400,439 – 11,400,540	- - - "knownCDS=Parent=FBtr0087303;Name=sli-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8355-RC" - - - - -	5499	11,400,439 – 11,400,540	-	6	101	87.11	-1.52	0.88	0.651013
3366	2R_DroMel_CAF1	11,408,777 – 11,408,888	- - - - - - - - -	5500	11,408,777 – 11,408,888	-	5	115	86.10	-1.98	0.65	0.554362
3367	2R_DroMel_CAF1	11,411,302 – 11,411,447	- - - - - - - - -	5501	11,411,302 – 11,411,421	-	5	119	80.03	-1.82	0.72	0.833943
3367	2R_DroMel_CAF1	11,411,302 – 11,411,447	- - - - - - - - -	5502	11,411,342 – 11,411,447	-	5	105	86.86	-2.50	0.77	0.970736
3368	2R_DroMel_CAF1	11,411,970 – 11,412,063	- - - - - - - - -	5503	11,411,970 – 11,412,063	-	5	106	76.86	-1.56	0.07	0.717062
3369	2R_DroMel_CAF1	11,414,995 – 11,415,126	- - - - - - - - -	5504	11,414,995 – 11,415,086	+	4	99	81.51	-2.62	0.70	0.986338
				5505	11,414,995 – 11,415,086	-	4	99	81.51	-2.74	0.69	0.990052
				5506	11,415,027 – 11,415,126	+	4	99	90.69	-1.80	0.91	0.908247
3370	2R_DroMel_CAF1	11,415,316 – 11,415,420	- - - - - - - - -	5507	11,415,316 – 11,415,420	-	4	104	92.79	-1.72	0.80	0.614070
3371	2R_DroMel_CAF1	11,415,840 – 11,415,947	- - - - - - - - -	5508	11,415,840 – 11,415,947	-	4	107	97.13	-2.02	0.93	0.852609
3372	2R_DroMel_CAF1	11,418,177 – 11,418,280	- - - - - - - - -	5509	11,418,177 – 11,418,280	+	3	106	75.72	-1.59	0.69	0.866858
3372	2R_DroMel_CAF1	11,418,177 – 11,418,280	- - - - - - - - -	5510	11,418,177 – 11,418,280	-	3	106	75.72	-1.78	0.70	0.957600
3373	2R_DroMel_CAF1	11,427,092 – 11,427,185	- - - - - - - - -	5511	11,427,092 – 11,427,185	-	6	106	84.42	-2.39	0.71	0.622876
3374	2R_DroMel_CAF1	11,427,223 – 11,427,313	- - - - - - - - -	5512	11,427,223 – 11,427,313	+	6	112	79.24	-1.51	0.62	0.600184
3375	2R_DroMel_CAF1	11,432,031 – 11,432,137	- - - - - - - - -	5513	11,432,031 – 11,432,137	+	5	106	94.33	-1.51	0.81	0.632216
3376	2R_DroMel_CAF1	11,432,746 – 11,432,847	- - - - - - - - -	5514	11,432,746 – 11,432,847	+	5	101	91.08	-2.04	0.82	0.964365
3376	2R_DroMel_CAF1	11,432,746 – 11,432,847	- - - - - - - - -	5515	11,432,746 – 11,432,847	-	5	101	91.08	-1.77	0.74	0.606921
3377	2R_DroMel_CAF1	11,433,478 – 11,433,572	- - - - - - - - -	5516	11,433,478 – 11,433,572	+	5	96	95.56	-1.87	0.85	0.962529
3378	2R_DroMel_CAF1	11,434,070 – 11,434,170	- - - - - - - - -	5517	11,434,070 – 11,434,170	-	5	101	83.66	-2.59	0.85	0.992538
3379	2R_DroMel_CAF1	11,434,928 – 11,435,048	- - - - - - - - -	5518	11,434,928 – 11,435,048	+	5	120	93.67	-2.00	0.81	0.944939
3379	2R_DroMel_CAF1	11,434,928 – 11,435,048	- - - - - - - - -	5519	11,434,928 – 11,435,048	-	5	120	93.67	-1.97	0.79	0.872634
3380	2R_DroMel_CAF1	11,439,768 – 11,439,883	- - - "knownCDS=Parent=FBtr0087299;Name=CG8291-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8291-RB" - - - - -	5520	11,439,768 – 11,439,883	-	6	115	75.38	-2.10	0.51	0.918654
3381	2R_DroMel_CAF1	11,442,986 – 11,443,200	- - - - - - - - -	5521	11,442,986 – 11,443,085	+	5	120	74.09	-1.85	0.46	0.744657
3381	2R_DroMel_CAF1	11,442,986 – 11,443,200	- - - - - - - - -	5522	11,443,085 – 11,443,200	+	5	120	89.45	-1.53	0.75	0.524678
3382	2R_DroMel_CAF1	11,443,521 – 11,443,637	- - - - - - - - -	5523	11,443,521 – 11,443,612	+	6	98	80.17	-1.64	0.66	0.735999
				5524	11,443,521 – 11,443,612	-	6	98	80.17	-2.14	0.57	0.763690
				5525	11,443,546 – 11,443,637	+	6	91	81.32	-1.64	0.78	0.773251
3383	2R_DroMel_CAF1	11,444,096 – 11,444,244	- - - - - - - - -	5526	11,444,096 – 11,444,214	+	5	118	87.97	-1.88	0.72	0.665978
				5527	11,444,134 – 11,444,244	+	5	120	74.71	-1.62	0.60	0.660300
				5528	11,444,134 – 11,444,244	-	5	120	74.71	-1.69	0.53	0.560884
3384	2R_DroMel_CAF1	11,445,374 – 11,445,509	- - - - - - - - -	5529	11,445,374 – 11,445,469	+	5	120	77.63	-2.11	0.60	0.936644
				5530	11,445,374 – 11,445,469	-	5	120	77.63	-2.26	0.40	0.916944
				5531	11,445,409 – 11,445,509	+	5	120	79.17	-2.34	0.49	0.914994
3385	2R_DroMel_CAF1	11,445,913 – 11,446,051	- - - - - - - - -	5532	11,445,913 – 11,446,015	-	6	120	76.26	-2.35	0.58	0.976300
3385	2R_DroMel_CAF1	11,445,913 – 11,446,051	- - - - - - - - -	5533	11,445,945 – 11,446,051	-	6	120	74.05	-2.55	0.43	0.981034
3386	2R_DroMel_CAF1	11,446,125 – 11,446,253	- - - - - - - - -	5534	11,446,125 – 11,446,223	-	5	110	80.06	-1.54	0.76	0.682382
3386	2R_DroMel_CAF1	11,446,125 – 11,446,253	- - - - - - - - -	5535	11,446,152 – 11,446,253	-	6	110	77.50	-1.92	0.60	0.892964
3387	2R_DroMel_CAF1	11,448,837 – 11,448,934	- - - - - - - - -	5536	11,448,837 – 11,448,934	+	5	120	73.91	-1.78	0.55	0.780567
3387	2R_DroMel_CAF1	11,448,837 – 11,448,934	- - - - - - - - -	5537	11,448,837 – 11,448,934	-	5	120	73.91	-2.21	0.34	0.971569
3388	2R_DroMel_CAF1	11,449,004 – 11,449,110	- - - - - - - - -	5538	11,449,004 – 11,449,110	+	6	117	80.90	-2.44	0.65	0.891269
3389	2R_DroMel_CAF1	11,449,567 – 11,449,661	- - - - - - - - -	5539	11,449,567 – 11,449,661	+	5	94	82.22	-1.90	0.69	0.775985
3389	2R_DroMel_CAF1	11,449,567 – 11,449,661	- - - - - - - - -	5540	11,449,567 – 11,449,661	-	5	94	82.22	-1.82	0.68	0.709593
3390	2R_DroMel_CAF1	11,456,218 – 11,456,329	- - - "knownCDS=Parent=FBtr0087291;Name=CG8299-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8299-RA" - - - - -	5541	11,456,218 – 11,456,329	+	6	111	81.98	-1.86	0.68	0.695591
3390	2R_DroMel_CAF1	11,456,218 – 11,456,329		5542	11,456,218 – 11,456,329	-	6	111	81.98	-1.70	0.62	0.500000
3391	2R_DroMel_CAF1	11,456,978 – 11,457,070	- - - - - - - - -	5543	11,456,978 – 11,457,070	+	4	99	71.63	-1.90	0.55	0.891907
3392	2R_DroMel_CAF1	11,457,433 – 11,457,530	- - - - - - - - -	5544	11,457,433 – 11,457,530	+	4	118	86.40	-2.60	0.75	0.962072
3392	2R_DroMel_CAF1	11,457,433 – 11,457,530	- - - - - - - - -	5545	11,457,433 – 11,457,530	-	4	118	86.40	-1.43	0.77	0.542152
3393	2R_DroMel_CAF1	11,458,660 – 11,458,773	- - - - - - - - -	5546	11,458,660 – 11,458,773	+	3	119	80.29	-1.00	0.85	0.546557
3394	2R_DroMel_CAF1	11,460,098 – 11,460,192	- - - "knownCDS=Parent=FBtr0087200;Name=Cyp4aa1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8302-RA" - - - - -	5547	11,460,098 – 11,460,192	+	6	114	78.15	-1.48	0.73	0.859349
3395	2R_DroMel_CAF1	11,470,418 – 11,470,538	- - - "knownCDS=Parent=FBtr0087201;Name=CG8366-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8366-RA" - - - - -	5548	11,470,418 – 11,470,538	+	6	120	78.78	-1.19	0.66	0.505105
3396	2R_DroMel_CAF1	11,477,522 – 11,477,682	- - - "knownCDS=Parent=FBtr0087270, FBtr0087271, FBtr0087273;Name=Strn-Mlck-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18255-RA, FlyBase+Annotation+IDs:CG18255-RD, FlyBase+Annotation+IDs:CG18255-RE" - - - - -	5549	11,477,522 – 11,477,642	-	6	120	75.83	-1.63	0.56	0.676612
3396	2R_DroMel_CAF1	11,477,522 – 11,477,682		5550	11,477,562 – 11,477,682	-	6	120	75.28	-1.80	0.63	0.934129
3397	2R_DroMel_CAF1	11,492,107 – 11,492,215	- - - "knownCDS=Parent=FBtr0087270, FBtr0087271;Name=Strn-Mlck-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18255-RA, FlyBase+Annotation+IDs:CG18255-RD" - - - - -	5551	11,492,107 – 11,492,215	-	5	108	77.87	-1.62	0.18	0.500000
3398	2R_DroMel_CAF1	11,494,775 – 11,494,877	- - - "knownCDS=Parent=FBtr0087270, FBtr0087271;Name=Strn-Mlck-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18255-RA, FlyBase+Annotation+IDs:CG18255-RD" - - - - -	5552	11,494,775 – 11,494,877	+	6	105	80.06	-2.12	0.53	0.660124
3399	2R_DroMel_CAF1	11,505,693 – 11,505,787	- - - - - - - - -	5553	11,505,693 – 11,505,787	-	6	106	68.94	-1.21	0.59	0.590723
3400	2R_DroMel_CAF1	11,512,003 – 11,512,102	- - - "knownCDS=Parent=FBtr0087266;Name=ATPCL-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8322-RB" - - - - -	5554	11,512,003 – 11,512,102	+	6	105	80.70	-1.65	0.66	0.698427
3401	2R_DroMel_CAF1	11,512,483 – 11,512,603	- - - "knownCDS=Parent=FBtr0087266;Name=ATPCL-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8322-RB" - - - - -	5555	11,512,483 – 11,512,603	+	6	120	83.94	-2.51	0.69	0.660015
3402	2R_DroMel_CAF1	11,517,027 – 11,517,147	- - - "knownCDS=Parent=FBtr0087203;Name=CG8370-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8370-RA" - - - - -	5556	11,517,027 – 11,517,147	+	6	120	78.50	-1.71	0.57	0.645993
3403	2R_DroMel_CAF1	11,522,955 – 11,523,047	- - - - - - - - -	5557	11,522,955 – 11,523,047	+	3	92	92.75	-1.90	0.89	0.679358
3403	2R_DroMel_CAF1	11,522,955 – 11,523,047	- - - - - - - - -	5558	11,522,955 – 11,523,047	-	3	92	92.75	-2.23	0.91	0.885065
3404	2R_DroMel_CAF1	11,532,513 – 11,532,615	- - - - - - - - -	5559	11,532,513 – 11,532,615	-	5	108	87.46	-2.49	0.66	0.729227
3405	2R_DroMel_CAF1	11,534,203 – 11,534,312	- - - - - - - - -	5560	11,534,203 – 11,534,312	+	5	109	80.91	-2.27	0.60	0.899445
3406	2R_DroMel_CAF1	11,536,830 – 11,536,946	- - - "knownCDS=Parent=FBtr0087207;Name=CG8399-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8399-RA" - - - - -	5561	11,536,830 – 11,536,946	+	6	119	79.44	-1.77	0.63	0.773968
3407	2R_DroMel_CAF1	11,538,999 – 11,539,103	- - - "knownCDS=Parent=FBtr0087207;Name=CG8399-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8399-RA" - - - - -	5562	11,538,999 – 11,539,103	-	6	114	78.75	-1.73	0.71	0.895101
3408	2R_DroMel_CAF1	11,540,955 – 11,541,055	- - - - - - - - -	5563	11,540,955 – 11,541,055	+	6	106	76.99	-1.12	0.70	0.666814
3408	2R_DroMel_CAF1	11,540,955 – 11,541,055	- - - - - - - - -	5564	11,540,955 – 11,541,055	-	6	106	76.99	-1.01	0.68	0.500000
3409	2R_DroMel_CAF1	11,543,714 – 11,543,814	- - - "knownCDS=Parent=FBtr0087208;Name=CG8401-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8401-RA" - - - - -	5565	11,543,714 – 11,543,814	-	6	109	79.09	-2.16	0.64	0.920766
3410	2R_DroMel_CAF1	11,544,530 – 11,544,641	- - - - - - - - -	5566	11,544,530 – 11,544,641	+	4	119	85.51	-1.44	0.76	0.543008
3411	2R_DroMel_CAF1	11,546,185 – 11,546,277	- - - - - - - - -	5567	11,546,185 – 11,546,277	-	4	92	90.53	-1.74	0.81	0.750933
3412	2R_DroMel_CAF1	11,548,580 – 11,548,694	- - - - - - - - -	5568	11,548,580 – 11,548,694	+	5	120	78.61	-2.29	0.54	0.937051
3413	2R_DroMel_CAF1	11,551,046 – 11,551,158	- - - - - - - - -	5569	11,551,046 – 11,551,158	-	6	118	81.11	-1.96	0.70	0.820175
3414	2R_DroMel_CAF1	11,552,705 – 11,552,810	- - - - - - - - -	5570	11,552,705 – 11,552,810	+	6	119	78.11	-0.91	0.75	0.556017
3415	2R_DroMel_CAF1	11,553,367 – 11,553,487	- - - - - - - - -	5571	11,553,367 – 11,553,459	+	6	117	71.81	-2.19	0.43	0.945965
3415	2R_DroMel_CAF1	11,553,367 – 11,553,487	- - - - - - - - -	5572	11,553,385 – 11,553,487	+	5	108	78.64	-1.88	0.68	0.878559
3416	2R_DroMel_CAF1	11,557,673 – 11,557,776	- - - "knownCDS=Parent=FBtr0087209;Name=SP2353-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8403-RA" - - - - -	5573	11,557,673 – 11,557,776	+	6	105	85.79	-1.84	0.82	0.647001
3417	2R_DroMel_CAF1	11,559,338 – 11,559,440	- - - "knownCDS=Parent=FBtr0087209;Name=SP2353-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8403-RA" - - - - -	5574	11,559,338 – 11,559,440	+	6	111	78.24	-1.81	0.52	0.552815
3418	2R_DroMel_CAF1	11,563,260 – 11,563,362	- - - - - - - - -	5575	11,563,260 – 11,563,362	-	4	102	84.08	-1.65	0.67	0.596754
3419	2R_DroMel_CAF1	11,566,804 – 11,566,937	- - - - - - - - -	5576	11,566,804 – 11,566,899	+	5	103	93.27	-1.78	0.81	0.868935
3419	2R_DroMel_CAF1	11,566,804 – 11,566,937	- - - - - - - - -	5577	11,566,827 – 11,566,937	+	6	118	82.91	-2.39	0.68	0.747545
3420	2R_DroMel_CAF1	11,573,261 – 11,573,409	- - - - - - - - -	5578	11,573,261 – 11,573,369	+	5	108	99.44	-1.44	1.00	0.864320
				5579	11,573,261 – 11,573,369	-	5	108	99.44	-1.68	0.99	0.965225
				5580	11,573,297 – 11,573,409	-	5	112	97.86	-1.46	0.99	0.949503
3421	2R_DroMel_CAF1	11,573,584 – 11,573,683	- - - "knownCDS=Parent=FBtr0087210;Name=CG8405-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8405-RA" - - - - -	5581	11,573,584 – 11,573,683	+	5	99	95.76	-1.50	0.88	0.886096
3422	2R_DroMel_CAF1	11,574,856 – 11,575,003	- - - - - - - - -	5582	11,574,856 – 11,574,963	-	4	120	80.48	-2.03	0.69	0.895725
3422	2R_DroMel_CAF1	11,574,856 – 11,575,003	- - - - - - - - -	5583	11,574,896 – 11,575,003	-	5	120	83.18	-2.25	0.69	0.902559
3423	2R_DroMel_CAF1	11,575,080 – 11,575,179	- - - - - - - - -	5584	11,575,080 – 11,575,179	+	4	120	82.08	-1.48	0.78	0.546180
3424	2R_DroMel_CAF1	11,575,861 – 11,575,981	- - - - - - - - -	5585	11,575,861 – 11,575,981	+	5	120	85.41	-1.50	0.76	0.500000
3425	2R_DroMel_CAF1	11,580,748 – 11,580,986	- - - - - - - - -	5586	11,580,748 – 11,580,849	+	5	113	87.36	-2.11	0.69	0.698997
				5587	11,580,748 – 11,580,849	-	5	113	87.36	-1.90	0.78	0.848250
				5588	11,580,811 – 11,580,906	-	5	120	84.65	-2.01	0.71	0.799097
				5589	11,580,849 – 11,580,946	+	5	120	86.92	-2.32	0.73	0.892602
				5590	11,580,849 – 11,580,946	-	5	120	86.92	-1.81	0.85	0.896817
				5591	11,580,866 – 11,580,986	+	5	120	95.75	-1.88	0.87	0.980008
				5592	11,580,866 – 11,580,986	-	5	120	95.75	-1.10	0.93	0.570564
3426	2R_DroMel_CAF1	11,581,232 – 11,581,322	- - - - - - - - -	5593	11,581,232 – 11,581,322	-	5	90	98.67	-2.27	0.97	0.998779
3427	2R_DroMel_CAF1	11,581,397 – 11,581,511	- - - "knownCDS=texon1437;Parent=CG_RGUI_GID_mRNA_40003516, CG_DGIL_SNO_28356598" - - - - -	5594	11,581,397 – 11,581,511	-	5	120	97.25	-2.25	0.95	0.999291
3428	2R_DroMel_CAF1	11,582,276 – 11,582,415	- - - - - - - - -	5595	11,582,276 – 11,582,379	-	5	120	76.45	-1.86	0.37	0.621133
3428	2R_DroMel_CAF1	11,582,276 – 11,582,415	- - - - - - - - -	5596	11,582,314 – 11,582,415	-	5	120	73.38	-2.55	0.38	0.996605
3429	2R_DroMel_CAF1	11,584,063 – 11,584,173	- - - - - - - - -	5597	11,584,063 – 11,584,173	+	5	120	88.21	-1.69	0.86	0.884276
3430	2R_DroMel_CAF1	11,584,808 – 11,584,902	- - - - - - - - -	5598	11,584,808 – 11,584,902	+	5	120	79.70	-1.58	0.69	0.614148
3431	2R_DroMel_CAF1	11,584,982 – 11,585,094	- - - - - - - - -	5599	11,584,982 – 11,585,094	-	5	120	85.54	-1.84	0.89	0.919082
3432	2R_DroMel_CAF1	11,585,787 – 11,585,960	- - "RNAmicro=f:11585864_t:11585961_strand:+_p:0.903272" - - - - - -	5600	11,585,787 – 11,585,904	+	5	120	93.33	-1.13	0.89	0.510094
				5601	11,585,787 – 11,585,904	-	5	120	93.33	-1.62	0.83	0.859561
				5602	11,585,827 – 11,585,922	+	5	120	80.12	-1.94	0.74	0.902562
				5603	11,585,864 – 11,585,960	+	4	98	81.52	-1.99	0.69	0.860670
				5604	11,585,864 – 11,585,960	-	4	98	81.52	-3.05	0.84	0.998513
3433	2R_DroMel_CAF1	11,587,297 – 11,587,402	- - - - - - - - -	5605	11,587,297 – 11,587,402	+	5	120	86.33	-4.01	0.75	0.997738
3433	2R_DroMel_CAF1	11,587,297 – 11,587,402	- - - - - - - - -	5606	11,587,297 – 11,587,402	-	5	120	86.33	-2.93	0.79	0.994259
3434	2R_DroMel_CAF1	11,588,087 – 11,588,190	- - - - - - - - -	5607	11,588,087 – 11,588,190	+	5	120	87.98	-2.05	0.66	0.525654
3435	2R_DroMel_CAF1	11,588,398 – 11,588,518	- - - - - - - - -	5608	11,588,398 – 11,588,518	+	5	120	95.20	-1.98	0.80	0.888389
3436	2R_DroMel_CAF1	11,588,681 – 11,588,782	- - - - - - - - -	5609	11,588,681 – 11,588,782	+	3	108	79.05	-2.46	0.66	0.979908
3437	2R_DroMel_CAF1	11,588,947 – 11,589,046	- - - - - - - - -	5610	11,588,947 – 11,589,046	+	5	120	87.01	-2.07	0.64	0.515292
3438	2R_DroMel_CAF1	11,589,265 – 11,589,379	- - - - - - - - -	5611	11,589,265 – 11,589,379	+	5	120	95.01	-1.14	0.95	0.729750
3439	2R_DroMel_CAF1	11,589,626 – 11,589,734	- - - - - - - - -	5612	11,589,626 – 11,589,734	+	5	120	77.45	-2.37	0.54	0.974183
3440	2R_DroMel_CAF1	11,589,773 – 11,590,073	- - - - - - - - -	5613	11,589,773 – 11,589,887	-	5	120	97.25	-1.53	1.00	0.980669
				5614	11,589,887 – 11,589,993	+	4	115	78.96	-3.37	0.63	0.999316
				5615	11,589,887 – 11,589,993	-	4	115	78.96	-2.82	0.69	0.998017
				5616	11,589,926 – 11,590,033	+	5	120	82.30	-1.66	0.71	0.629513
				5617	11,589,953 – 11,590,073	+	5	120	93.32	-2.17	0.94	0.999634
				5618	11,589,953 – 11,590,073	-	5	120	93.32	-1.17	0.97	0.799631
3441	2R_DroMel_CAF1	11,590,826 – 11,590,936	- - - - - - - - -	5619	11,590,826 – 11,590,936	-	5	120	91.02	-1.73	0.90	0.979863
3442	2R_DroMel_CAF1	11,591,015 – 11,591,128	- - - - - - - - -	5620	11,591,015 – 11,591,128	+	3	120	93.80	-1.53	0.98	0.694871
3443	2R_DroMel_CAF1	11,591,773 – 11,591,889	- - - - - - - - -	5621	11,591,773 – 11,591,889	-	3	120	90.40	-2.16	0.77	0.558227
3444	2R_DroMel_CAF1	11,592,236 – 11,592,429	- - - - - - - - -	5622	11,592,236 – 11,592,356	-	3	120	98.32	-1.45	0.96	0.500000
				5623	11,592,276 – 11,592,396	+	3	120	97.21	-2.31	0.96	0.933291
				5624	11,592,276 – 11,592,396	-	3	120	97.21	-2.41	0.91	0.879553
				5625	11,592,316 – 11,592,429	+	3	120	90.88	-2.37	0.83	0.792818
				5626	11,592,316 – 11,592,429	-	3	120	90.88	-2.39	0.87	0.883595
3445	2R_DroMel_CAF1	11,598,138 – 11,598,243	- - - "knownCDS=Parent=FBtr0087256;Name=Dg-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18250-RA" - - - - -	5627	11,598,138 – 11,598,243	+	6	120	80.60	-1.36	0.70	0.617459
3446	2R_DroMel_CAF1	11,599,529 – 11,599,649	- - - "knownCDS=Parent=FBtr0087256;Name=Dg-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18250-RA" - - - - -	5628	11,599,529 – 11,599,649	+	6	120	74.83	-2.08	0.40	0.685607
3447	2R_DroMel_CAF1	11,599,729 – 11,599,849	- - - "knownCDS=Parent=FBtr0087256;Name=Dg-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18250-RA" - - - - -	5629	11,599,729 – 11,599,849	-	6	120	78.39	-1.84	0.51	0.507015
3448	2R_DroMel_CAF1	11,600,885 – 11,600,981	- - - "knownCDS=Parent=FBtr0087256;Name=Dg-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18250-RA" - - - - -	5630	11,600,885 – 11,600,981	+	4	120	77.89	-2.23	0.61	0.943667
3448	2R_DroMel_CAF1	11,600,885 – 11,600,981		5631	11,600,885 – 11,600,981	-	4	120	77.89	-2.45	0.65	0.988862
3449	2R_DroMel_CAF1	11,601,439 – 11,601,534	- - - - - - - - -	5632	11,601,439 – 11,601,534	+	3	96	94.43	-1.88	0.90	0.658799
3449	2R_DroMel_CAF1	11,601,439 – 11,601,534	- - - - - - - - -	5633	11,601,439 – 11,601,534	-	3	96	94.43	-2.23	0.91	0.864018
3450	2R_DroMel_CAF1	11,605,604 – 11,605,700	- - - - - - - - -	5634	11,605,604 – 11,605,700	-	6	112	80.51	-1.80	0.65	0.764577
3451	2R_DroMel_CAF1	11,606,755 – 11,606,855	- - - - - - - - -	5635	11,606,755 – 11,606,855	-	5	120	79.51	-1.72	0.62	0.615209
3452	2R_DroMel_CAF1	11,607,300 – 11,607,392	- - - - - - - - -	5636	11,607,300 – 11,607,392	-	5	92	95.87	-1.57	0.94	0.979710
3453	2R_DroMel_CAF1	11,609,821 – 11,609,920	- - - - - - - - -	5637	11,609,821 – 11,609,920	+	4	109	87.02	-1.65	0.73	0.655761
3454	2R_DroMel_CAF1	11,610,128 – 11,610,222	- - - - - - - - -	5638	11,610,128 – 11,610,222	-	6	102	76.01	-1.39	0.59	0.544076
3455	2R_DroMel_CAF1	11,610,632 – 11,610,727	- - - - - - - - -	5639	11,610,632 – 11,610,727	+	6	99	79.01	-1.48	0.68	0.750460
3456	2R_DroMel_CAF1	11,611,300 – 11,611,397	- - - - - - - - -	5640	11,611,300 – 11,611,397	-	6	101	83.74	-2.24	0.71	0.670924
3457	2R_DroMel_CAF1	11,613,715 – 11,613,806	- - - - - - - - -	5641	11,613,715 – 11,613,806	-	4	92	84.06	-1.61	0.71	0.626391
3458	2R_DroMel_CAF1	11,617,551 – 11,617,650	- - - - - - - - -	5642	11,617,551 – 11,617,650	+	5	99	98.79	-1.66	0.98	0.974198
3459	2R_DroMel_CAF1	11,620,846 – 11,620,953	- - - - - - - - -	5643	11,620,846 – 11,620,953	+	6	119	80.19	-1.69	0.65	0.736121
3459	2R_DroMel_CAF1	11,620,846 – 11,620,953	- - - - - - - - -	5644	11,620,846 – 11,620,953	-	6	119	80.19	-1.53	0.68	0.709871
3460	2R_DroMel_CAF1	11,627,749 – 11,627,840	- - - "knownCDS=Parent=FBtr0087218, FBtr0087221;Name=Asph-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8421-RD, FlyBase+Annotation+IDs:CG8421-RE" - - - - -	5645	11,627,749 – 11,627,840	+	6	94	80.14	-3.24	0.66	0.970385
3460	2R_DroMel_CAF1	11,627,749 – 11,627,840		5646	11,627,749 – 11,627,840	-	6	94	80.14	-2.85	0.56	0.939611
3461	2R_DroMel_CAF1	11,628,347 – 11,628,475	- - - - - - - - -	5647	11,628,347 – 11,628,443	+	5	97	82.17	-2.40	0.52	0.774836
3461	2R_DroMel_CAF1	11,628,347 – 11,628,475	- - - - - - - - -	5648	11,628,373 – 11,628,475	-	5	103	87.81	-2.15	0.65	0.520628
3462	2R_DroMel_CAF1	11,628,895 – 11,629,015	- - - "knownCDS=Parent=FBtr0087218, FBtr0087221;Name=Asph-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8421-RD, FlyBase+Annotation+IDs:CG8421-RE" - - - - -	5649	11,628,895 – 11,629,015	-	6	120	74.42	-2.18	0.49	0.942658
3463	2R_DroMel_CAF1	11,629,397 – 11,629,487	- - - - - - - - -	5650	11,629,397 – 11,629,487	+	5	91	96.02	-1.06	0.96	0.541672
3463	2R_DroMel_CAF1	11,629,397 – 11,629,487	- - - - - - - - -	5651	11,629,397 – 11,629,487	-	5	91	96.02	-1.11	0.93	0.555810
3464	2R_DroMel_CAF1	11,629,981 – 11,630,124	- - "RNAmicro=f:11629981_t:11630088_strand:-_p:0.899235" - - - - - -	5652	11,629,981 – 11,630,089	+	6	108	76.50	-2.93	0.68	0.992038
				5653	11,629,981 – 11,630,089	-	6	108	76.50	-3.28	0.69	0.992546
				5654	11,630,012 – 11,630,124	+	6	115	79.82	-2.23	0.60	0.872293
				5655	11,630,012 – 11,630,124	-	6	115	79.82	-2.67	0.60	0.941015
3465	2R_DroMel_CAF1	11,640,257 – 11,640,371	- - - "knownCDS=Parent=FBtr0089590;Name=spin-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8428-RD" - - - - -	5656	11,640,257 – 11,640,371	-	6	117	78.09	-2.49	0.52	0.939295
3466	2R_DroMel_CAF1	11,641,778 – 11,641,871	- - - - - - - - -	5657	11,641,778 – 11,641,871	+	5	99	91.05	-1.45	0.80	0.605191
3467	2R_DroMel_CAF1	11,642,523 – 11,642,639	- - - - - - - - -	5658	11,642,523 – 11,642,639	+	5	116	88.52	-2.19	0.85	0.986487
3467	2R_DroMel_CAF1	11,642,523 – 11,642,639	- - - - - - - - -	5659	11,642,523 – 11,642,639	-	5	116	88.52	-1.46	0.86	0.715499
3468	2R_DroMel_CAF1	11,649,105 – 11,649,204	- - - - - - - - -	5660	11,649,105 – 11,649,204	-	6	115	76.53	-3.28	0.36	0.986176
3469	2R_DroMel_CAF1	11,649,996 – 11,650,088	- - - - - - - - -	5661	11,649,996 – 11,650,088	+	4	92	84.59	-1.72	0.84	0.789849
3470	2R_DroMel_CAF1	11,650,664 – 11,650,774	- - - - - - - - -	5662	11,650,664 – 11,650,774	-	5	120	87.69	-2.10	0.76	0.885427
3471	2R_DroMel_CAF1	11,653,499 – 11,653,649	- - - - - - - - -	5663	11,653,499 – 11,653,609	-	4	120	86.53	-1.85	0.85	0.867539
				5664	11,653,529 – 11,653,649	+	4	120	92.64	-1.47	0.86	0.594273
				5665	11,653,529 – 11,653,649	-	4	120	92.64	-1.47	0.88	0.614668
3472	2R_DroMel_CAF1	11,656,598 – 11,656,717	- - - - - - - - -	5666	11,656,598 – 11,656,717	+	5	119	94.96	-1.50	0.94	0.968625
3473	2R_DroMel_CAF1	11,657,951 – 11,658,071	- - - - - - - - -	5667	11,657,951 – 11,658,071	+	4	120	93.33	-1.89	0.87	0.857689
3473	2R_DroMel_CAF1	11,657,951 – 11,658,071	- - - - - - - - -	5668	11,657,951 – 11,658,071	-	4	120	93.33	-2.26	0.94	0.981218
3474	2R_DroMel_CAF1	11,663,868 – 11,663,968	- - - "knownCDS=Parent=FBtr0100497;Name=CG10731-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10731-RA" - - - - -	5669	11,663,868 – 11,663,968	+	6	103	76.98	-1.66	0.55	0.591843
3475	2R_DroMel_CAF1	11,672,772 – 11,672,904	- - - "knownCDS=Parent=FBtr0087250;Name=CG10734-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10734-RA" - - - - -	5670	11,672,772 – 11,672,892	-	5	120	72.21	-1.90	0.26	0.866816
3475	2R_DroMel_CAF1	11,672,772 – 11,672,904		5671	11,672,812 – 11,672,904	+	5	120	66.48	-1.88	0.32	0.534980
3476	2R_DroMel_CAF1	11,674,449 – 11,674,556	- - - - - - - - -	5672	11,674,449 – 11,674,556	+	5	108	90.90	-2.12	0.71	0.605286
3477	2R_DroMel_CAF1	11,684,527 – 11,684,630	- - - "knownCDS=Parent=FBtr0087249;Name=CG8435-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8435-RA" - - - - -	5673	11,684,527 – 11,684,630	+	6	103	81.42	-2.59	0.60	0.842729
3477	2R_DroMel_CAF1	11,684,527 – 11,684,630		5674	11,684,527 – 11,684,630	-	6	103	81.42	-2.16	0.68	0.829178
3478	2R_DroMel_CAF1	11,686,455 – 11,686,553	- - - "knownCDS=Parent=FBtr0087248;Name=Ptp52F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18243-RA" - - - - -	5675	11,686,455 – 11,686,553	+	6	119	77.98	-0.96	0.79	0.643396
3479	2R_DroMel_CAF1	11,688,944 – 11,689,054	- - - "knownCDS=Parent=FBtr0087248;Name=Ptp52F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18243-RA" - - - - -	5676	11,688,944 – 11,689,054	+	6	116	70.91	-2.05	0.44	0.926993
3480	2R_DroMel_CAF1	11,690,905 – 11,691,015	- - - "knownCDS=Parent=FBtr0087248;Name=Ptp52F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18243-RA" - - - - -	5677	11,690,905 – 11,691,015	+	6	116	79.43	-1.29	0.65	0.516401
3481	2R_DroMel_CAF1	11,691,189 – 11,691,289	- - - - - - - - -	5678	11,691,189 – 11,691,289	-	3	100	91.89	-1.56	0.91	0.512142
3482	2R_DroMel_CAF1	11,691,558 – 11,691,670	- - - - - - - - -	5679	11,691,558 – 11,691,670	+	6	114	74.98	-1.65	0.53	0.641028
3482	2R_DroMel_CAF1	11,691,558 – 11,691,670	- - - - - - - - -	5680	11,691,558 – 11,691,670	-	6	114	74.98	-1.54	0.60	0.765104
3483	2R_DroMel_CAF1	11,692,085 – 11,692,175	- - - - - - - - -	5681	11,692,085 – 11,692,175	-	6	92	77.12	-1.80	0.79	0.956943
3484	2R_DroMel_CAF1	11,693,352 – 11,693,471	- - - - - - - - -	5682	11,693,352 – 11,693,471	+	5	120	87.44	-1.98	0.80	0.915112
3485	2R_DroMel_CAF1	11,694,489 – 11,694,582	- - - - - - - - -	5683	11,694,489 – 11,694,582	-	5	93	96.55	-1.16	0.95	0.697035
3486	2R_DroMel_CAF1	11,694,606 – 11,694,717	- - - - - - - - -	5684	11,694,606 – 11,694,717	-	5	111	97.84	-1.71	0.96	0.986629
3487	2R_DroMel_CAF1	11,694,825 – 11,694,920	- - - - - - - - -	5685	11,694,825 – 11,694,920	+	5	96	97.69	-1.07	1.02	0.577016
3488	2R_DroMel_CAF1	11,695,425 – 11,695,539	- - - - - - - - -	5686	11,695,425 – 11,695,539	-	5	114	96.84	-1.12	0.94	0.531201
3489	2R_DroMel_CAF1	11,697,328 – 11,697,431	- - - - - - - - -	5687	11,697,328 – 11,697,431	-	6	107	67.59	-1.72	0.38	0.611752
3490	2R_DroMel_CAF1	11,702,097 – 11,702,213	- - - - - - - - -	5688	11,702,097 – 11,702,213	-	5	120	92.01	-2.22	0.80	0.972051
3491	2R_DroMel_CAF1	11,702,785 – 11,703,001	- - - - - - - - -	5689	11,702,785 – 11,702,904	-	4	120	91.76	-1.47	0.83	0.549856
				5690	11,702,865 – 11,702,968	+	4	116	77.13	-3.11	0.41	0.869221
				5691	11,702,904 – 11,703,001	-	4	109	76.83	-2.85	0.38	0.522768
3492	2R_DroMel_CAF1	11,713,223 – 11,713,315	- - - - - - - - -	5692	11,713,223 – 11,713,315	+	6	101	75.65	-1.78	0.57	0.835535
3493	2R_DroMel_CAF1	11,715,426 – 11,715,541	- - - "knownCDS=Parent=FBtr0087244;Name=shark-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18247-RA" - - - - -	5693	11,715,426 – 11,715,541	-	6	116	83.29	-2.01	0.77	0.744858
3494	2R_DroMel_CAF1	11,716,539 – 11,716,644	- - - "knownCDS=Parent=FBtr0087244;Name=shark-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18247-RA" - - - - -	5694	11,716,539 – 11,716,644	+	6	105	84.00	-2.27	0.74	0.713837
3495	2R_DroMel_CAF1	11,719,173 – 11,719,263	- - - "knownCDS=Parent=FBtr0087193, FBtr0087194, FBtr0087195, FBtr0087196;Name=mrj-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8448-RD, FlyBase+Annotation+IDs:CG8448-RB, FlyBase+Annotation+IDs:CG8448-RC, FlyBase+Annotation+IDs:CG8448-RA" - - - - -	5695	11,719,173 – 11,719,263	-	6	110	79.50	-1.45	0.69	0.725265
3496	2R_DroMel_CAF1	11,722,492 – 11,722,586	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000089; Name=Dmel_Gln_CTG_14000089;TFAMID=DmelQCTG-11722569" "tRNAscan=type:Gln:anticodon:CTG f:11722497_t:11722573_strand=-_cove=73.65" - - "Rfam=V01265.1/1-72_RF00005;tRNA;\|7e-35" - - "ncRNAdb=MmuscAK138213_unclassifiable\|2e-29" "Flybase=FBgn0050237:CR30237:cytosolic_tRNA_gene\|9e-37"	5696	11,722,492 – 11,722,586	+	6	94	90.43	-1.23	0.89	0.518364
3497	2R_DroMel_CAF1	11,723,950 – 11,724,067	- - - - - - - - -	5697	11,723,950 – 11,724,067	-	4	120	89.69	-1.63	0.80	0.692359
3498	2R_DroMel_CAF1	11,731,759 – 11,731,855	- - - - - - - - -	5698	11,731,759 – 11,731,855	-	5	100	82.00	-1.79	0.65	0.631266
3499	2R_DroMel_CAF1	11,734,466 – 11,734,623	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000091; Name=Dmel_Glu_CTC_14000091;TFAMID=DmelECTC-11734501" "tRNAscan=type:Glu:anticodon:CTC f:11734500_t:11734605_strand=+_cove=79.25" - - "Rfam=AE003794.3/25061-25132_RF00005;tRNA;\|2e-27" - - - "Flybase=FBgn0050239:CR30239:cytosolic_tRNA_gene\|2e-36"	5699	11,734,466 – 11,734,586	+	3	120	73.33	-1.40	0.78	0.957140
				5700	11,734,466 – 11,734,586	-	3	120	73.33	-2.06	0.80	0.999331
				5701	11,734,506 – 11,734,623	-	3	120	79.44	-2.91	0.71	0.997145
3500	2R_DroMel_CAF1	11,734,866 – 11,735,000	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000092; Name=Dmel_Glu_TTC_14000092;TFAMID=DmelETTC-11734915" "tRNAscan=type:Glu:anticodon:TTC f:11734914_t:11735033_strand=+_cove=80.27" - - "Rfam=AE003794.3/24226-24155_RF00005;tRNA;\|1e-34" - - - "Flybase=FBgn0011848:transfer_RNA:glu4:56Fa:cytosolic_tRNA_gene\|1e-36"	5702	11,734,866 – 11,734,979	+	5	120	79.72	-2.06	0.62	0.863785
				5703	11,734,866 – 11,734,979	-	5	120	79.72	-1.60	0.67	0.600019
				5704	11,734,899 – 11,735,000	+	6	101	86.12	-1.54	0.92	0.794976
				5705	11,734,899 – 11,735,000	-	6	101	86.12	-1.94	0.86	0.837783
3501	2R_DroMel_CAF1	11,735,332 – 11,735,434	- - - - - - - - -	5706	11,735,332 – 11,735,434	+	6	119	66.89	-2.54	0.21	0.847649
3502	2R_DroMel_CAF1	11,738,391 – 11,738,591	- - - "knownCDS=Parent=FBtr0087191;Name=CG15706-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15706-RA" - - - - -	5707	11,738,391 – 11,738,511	-	6	120	83.00	-1.50	0.72	0.530387
3502	2R_DroMel_CAF1	11,738,391 – 11,738,591		5708	11,738,471 – 11,738,591	-	6	120	83.33	-2.41	0.62	0.590753
3503	2R_DroMel_CAF1	11,739,300 – 11,739,413	- - - "knownCDS=Parent=FBtr0087191;Name=CG15706-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15706-RA" - - - - -	5709	11,739,300 – 11,739,413	-	6	113	78.08	-1.60	0.60	0.663382
3504	2R_DroMel_CAF1	11,739,631 – 11,739,751	- - - "knownCDS=Parent=FBtr0087191;Name=CG15706-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15706-RA" - - - - -	5710	11,739,631 – 11,739,751	-	6	120	77.89	-1.38	0.61	0.506938
3505	2R_DroMel_CAF1	11,742,881 – 11,743,001	- - - "knownCDS=Parent=FBtr0087130;Name=Tsf3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3666-RA" - - - - -	5711	11,742,881 – 11,743,001	+	6	120	76.72	-1.98	0.53	0.820028
3505	2R_DroMel_CAF1	11,742,881 – 11,743,001		5712	11,742,881 – 11,743,001	-	6	120	76.72	-2.08	0.51	0.851207
3506	2R_DroMel_CAF1	11,744,924 – 11,745,026	- - - - - - - - -	5713	11,744,924 – 11,745,026	-	5	102	92.96	-1.80	0.89	0.987233
3507	2R_DroMel_CAF1	11,746,077 – 11,746,195	- - - "knownCDS=Parent=FBtr0087131;Name=CG15701-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15701-RA" - - - - -	5714	11,746,077 – 11,746,195	+	5	118	88.22	-1.47	0.85	0.688914
3507	2R_DroMel_CAF1	11,746,077 – 11,746,195		5715	11,746,077 – 11,746,195	-	5	118	88.22	-2.20	0.76	0.913816
3508	2R_DroMel_CAF1	11,751,922 – 11,752,018	- - - - - - - - -	5716	11,751,922 – 11,752,018	+	6	99	80.63	-2.06	0.62	0.797231
3509	2R_DroMel_CAF1	11,754,961 – 11,755,053	- - - "knownCDS=Parent=FBtr0087189;Name=CG15707-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15707-RA" - - - - -	5717	11,754,961 – 11,755,053	+	3	107	75.08	-1.94	0.71	0.989100
3509	2R_DroMel_CAF1	11,754,961 – 11,755,053		5718	11,754,961 – 11,755,053	-	3	107	75.08	-2.39	0.53	0.889552
3510	2R_DroMel_CAF1	11,756,554 – 11,756,670	- - - "knownCDS=Parent=FBtr0087188;Name=CG15708-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15708-RA" - - - - -	5719	11,756,554 – 11,756,670	+	6	119	80.40	-1.92	0.55	0.561622
3511	2R_DroMel_CAF1	11,757,081 – 11,757,184	- - - - - - - - -	5720	11,757,081 – 11,757,184	-	6	119	80.21	-1.82	0.62	0.722210
3512	2R_DroMel_CAF1	11,758,996 – 11,759,098	- - - "knownCDS=Parent=FBtr0087187;Name=Cng-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7779-RA" - - - - -	5721	11,758,996 – 11,759,098	+	6	119	76.26	-1.37	0.65	0.754603
3513	2R_DroMel_CAF1	11,768,197 – 11,768,287	- - - - - - - - -	5722	11,768,197 – 11,768,287	-	5	90	94.89	-1.69	0.89	0.973623
3514	2R_DroMel_CAF1	11,769,224 – 11,769,354	- - - - - - - - -	5723	11,769,224 – 11,769,332	+	5	120	81.43	-1.82	0.60	0.578085
				5724	11,769,224 – 11,769,332	-	5	120	81.43	-1.87	0.61	0.633450
				5725	11,769,253 – 11,769,354	+	5	111	85.74	-1.82	0.84	0.870957
3515	2R_DroMel_CAF1	11,770,997 – 11,771,090	- - - - - - - - -	5726	11,770,997 – 11,771,090	+	5	104	81.71	-1.76	0.65	0.614341
3516	2R_DroMel_CAF1	11,782,148 – 11,782,241	- - - "knownCDS=Parent=FBtr0087184;Name=Khc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7765-RA" - - - - -	5727	11,782,148 – 11,782,241	-	6	99	77.72	-1.62	0.65	0.828314
3517	2R_DroMel_CAF1	11,784,642 – 11,784,759	- - - "knownCDS=Parent=FBtr0087184;Name=Khc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7765-RA" - - - - -	5728	11,784,642 – 11,784,759	+	6	120	81.13	-1.40	0.66	0.522165
3518	2R_DroMel_CAF1	11,788,603 – 11,788,719	- - - "knownCDS=Parent=FBtr0087135;Name=CG33017-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33017-RB" - - - - -	5729	11,788,603 – 11,788,719	+	3	116	81.32	-2.50	0.55	0.530708
3519	2R_DroMel_CAF1	11,790,666 – 11,790,780	- - - "knownCDS=Parent=FBtr0087135;Name=CG33017-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33017-RB" - - - - -	5730	11,790,666 – 11,790,780	-	4	114	86.55	-1.61	0.74	0.645365
3520	2R_DroMel_CAF1	11,791,500 – 11,791,610	- - - "knownCDS=Parent=FBtr0087135;Name=CG33017-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33017-RB" - - - - -	5731	11,791,500 – 11,791,610	+	6	113	87.69	-3.95	0.69	0.794289
3520	2R_DroMel_CAF1	11,791,500 – 11,791,610		5732	11,791,500 – 11,791,610	-	6	113	87.69	-3.25	0.75	0.752859
3521	2R_DroMel_CAF1	11,793,744 – 11,793,834	- - - - - - - - -	5733	11,793,744 – 11,793,834	+	3	90	77.99	-2.07	0.80	0.986882
3521	2R_DroMel_CAF1	11,793,744 – 11,793,834	- - - - - - - - -	5734	11,793,744 – 11,793,834	-	3	90	77.99	-2.44	0.92	0.999210
3522	2R_DroMel_CAF1	11,798,215 – 11,798,335	- - - - - - - - -	5735	11,798,215 – 11,798,335	-	3	120	91.67	-1.45	0.92	0.500000
3523	2R_DroMel_CAF1	11,798,807 – 11,798,927	- - - "knownCDS=Parent=FBtr0087138;Name=CG9068-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9068-RA" - - - - -	5736	11,798,807 – 11,798,927	+	3	120	98.61	-1.93	0.97	0.835717
3524	2R_DroMel_CAF1	11,799,544 – 11,799,664	- - - "knownCDS=Parent=FBtr0087138;Name=CG9068-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9068-RA" - - - - -	5737	11,799,544 – 11,799,664	-	3	120	96.08	-1.92	0.96	0.849468
3525	2R_DroMel_CAF1	11,800,503 – 11,800,623	- - - "knownCDS=Parent=FBtr0087138;Name=CG9068-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9068-RA" - - - - -	5738	11,800,503 – 11,800,623	-	3	120	97.22	-1.53	0.97	0.611643
3526	2R_DroMel_CAF1	11,800,863 – 11,801,063	- - - "knownCDS=Parent=FBtr0087138;Name=CG9068-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9068-RA" - - - - -	5739	11,800,863 – 11,800,983	+	3	120	97.78	-1.75	0.94	0.677636
3526	2R_DroMel_CAF1	11,800,863 – 11,801,063		5740	11,800,943 – 11,801,063	+	3	120	96.67	-1.92	0.95	0.817257
3527	2R_DroMel_CAF1	11,801,262 – 11,801,382	- - - "knownCDS=Parent=FBtr0087138;Name=CG9068-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9068-RA" - - - - -	5741	11,801,262 – 11,801,382	-	3	120	98.33	-1.51	0.95	0.509846
3528	2R_DroMel_CAF1	11,802,022 – 11,802,142	- - - "knownCDS=Parent=FBtr0087138;Name=CG9068-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9068-RA" - - - - -	5742	11,802,022 – 11,802,142	+	3	120	95.56	-1.79	0.96	0.778993
3529	2R_DroMel_CAF1	11,812,473 – 11,812,600	- - - - - - - - -	5743	11,812,473 – 11,812,573	+	6	102	81.84	-1.88	0.72	0.763244
				5744	11,812,473 – 11,812,573	-	6	102	81.84	-1.52	0.75	0.662230
				5745	11,812,500 – 11,812,600	-	6	100	83.53	-1.47	0.79	0.530969
3530	2R_DroMel_CAF1	11,814,802 – 11,814,895	- - - - - - - - -	5746	11,814,802 – 11,814,895	-	6	111	78.42	-2.18	0.54	0.860653
3531	2R_DroMel_CAF1	11,818,024 – 11,818,117	- - - - - - - - -	5747	11,818,024 – 11,818,117	+	6	112	68.94	-2.03	0.75	0.989496
3531	2R_DroMel_CAF1	11,818,024 – 11,818,117	- - - - - - - - -	5748	11,818,024 – 11,818,117	-	6	112	68.94	-2.41	0.77	0.990426
3532	2R_DroMel_CAF1	11,818,741 – 11,818,869	- - - - - - - - -	5749	11,818,741 – 11,818,834	+	6	100	82.80	-1.95	0.75	0.734188
3532	2R_DroMel_CAF1	11,818,741 – 11,818,869	- - - - - - - - -	5750	11,818,778 – 11,818,869	+	3	93	71.96	-1.12	0.96	0.999502
3533	2R_DroMel_CAF1	11,818,888 – 11,819,007	- - - - - - - - -	5751	11,818,888 – 11,818,990	-	6	114	82.34	-2.01	0.69	0.729627
				5752	11,818,912 – 11,819,007	+	6	97	80.04	-1.61	0.62	0.625274
				5753	11,818,912 – 11,819,007	-	6	97	80.04	-1.83	0.79	0.893593
3534	2R_DroMel_CAF1	11,820,450 – 11,820,553	- - - - - - - - -	5754	11,820,450 – 11,820,553	-	6	118	78.22	-1.83	0.58	0.776644
3535	2R_DroMel_CAF1	11,822,086 – 11,822,204	- - - - - - - - -	5755	11,822,086 – 11,822,179	+	6	103	82.23	-2.45	0.73	0.865452
				5756	11,822,086 – 11,822,179	-	6	103	82.23	-2.70	0.67	0.852379
				5757	11,822,113 – 11,822,204	+	5	100	91.27	-1.56	0.85	0.873693
3536	2R_DroMel_CAF1	11,824,584 – 11,824,697	- - - "knownCDS=Parent=FBtr0087142;Name=CG15924-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15924-RA" - - - - -	5758	11,824,584 – 11,824,678	+	6	99	79.86	-1.99	0.53	0.572444
				5759	11,824,584 – 11,824,678	-	6	99	79.86	-1.41	0.64	0.571920
				5760	11,824,607 – 11,824,697	+	6	105	83.37	-2.46	0.62	0.585353
				5761	11,824,607 – 11,824,697	-	6	105	83.37	-3.28	0.71	0.882727
3537	2R_DroMel_CAF1	11,826,686 – 11,826,777	- - - - - - - - -	5762	11,826,686 – 11,826,777	+	5	93	95.63	-2.56	0.89	0.999386
3537	2R_DroMel_CAF1	11,826,686 – 11,826,777	- - - - - - - - -	5763	11,826,686 – 11,826,777	-	5	93	95.63	-2.75	0.88	0.999468
3538	2R_DroMel_CAF1	11,829,078 – 11,829,190	- - - "knownCDS=Parent=FBtr0087143;Name=CG3896-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3896-RA" - - - - -	5764	11,829,078 – 11,829,190	+	6	117	76.91	-1.28	0.72	0.820757
3539	2R_DroMel_CAF1	11,830,007 – 11,830,105	- - "RNAmicro=f:11830007_t:11830104_strand:-_p:0.532185" "knownCDS=Parent=FBtr0087143;Name=CG3896-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3896-RA" - - - - -	5765	11,830,007 – 11,830,105	+	6	98	85.58	-1.99	0.77	0.569289
3539	2R_DroMel_CAF1	11,830,007 – 11,830,105		5766	11,830,007 – 11,830,105	-	6	98	85.58	-2.18	0.91	0.966188
3540	2R_DroMel_CAF1	11,831,833 – 11,831,935	- - - "knownCDS=Parent=FBtr0087178;Name=CG8060-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8060-RA" - - - - -	5767	11,831,833 – 11,831,935	-	6	102	86.21	-2.38	0.78	0.715456
3541	2R_DroMel_CAF1	11,835,068 – 11,835,188	- - - "knownCDS=Parent=FBtr0087178;Name=CG8060-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8060-RA" - - - - -	5768	11,835,068 – 11,835,188	-	6	120	76.94	-1.44	0.59	0.537758
3542	2R_DroMel_CAF1	11,837,275 – 11,837,370	- - - "knownCDS=Parent=FBtr0087144;Name=CG4282-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4282-RA" - - - - -	5769	11,837,275 – 11,837,370	+	6	96	79.31	-2.20	0.60	0.895894
3543	2R_DroMel_CAF1	11,841,171 – 11,841,270	- - - "knownCDS=Parent=FBtr0087173, FBtr0087174, FBtr0087175, FBtr0087176;Name=Vha44-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8048-RA, FlyBase+Annotation+IDs:CG8048-RD, FlyBase+Annotation+IDs:CG8048-RC, FlyBase+Annotation+IDs:CG8048-RB" - - - - -	5770	11,841,171 – 11,841,270	-	6	105	76.51	-1.14	0.78	0.836969
3544	2R_DroMel_CAF1	11,843,300 – 11,843,403	- - - - - - - - -	5771	11,843,300 – 11,843,403	-	3	109	81.33	-3.80	0.61	0.990569
3545	2R_DroMel_CAF1	11,847,313 – 11,847,405	- - - - - - - - -	5772	11,847,313 – 11,847,405	-	6	98	80.84	-1.32	0.67	0.520984
3546	2R_DroMel_CAF1	11,848,499 – 11,848,597	- - - - - - - - -	5773	11,848,499 – 11,848,597	-	6	120	77.19	-2.70	0.45	0.958762
3547	2R_DroMel_CAF1	11,849,453 – 11,849,573	- - - - - - - - -	5774	11,849,453 – 11,849,573	+	4	120	83.90	-1.69	0.62	0.500000
3548	2R_DroMel_CAF1	11,859,929 – 11,860,019	- - - "knownCDS=Parent=FBtr0087150;Name=Nup62-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6251-RA" - - - - -	5775	11,859,929 – 11,860,019	+	6	93	69.14	-2.00	0.39	0.882883
3549	2R_DroMel_CAF1	11,861,686 – 11,861,790	- - - "knownCDS=Parent=FBtr0087170;Name=l(2)k07824-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7989-RA" - - - - -	5776	11,861,686 – 11,861,790	+	6	104	78.74	-1.82	0.54	0.603212
3550	2R_DroMel_CAF1	11,864,307 – 11,864,414	- - - - - - - - -	5777	11,864,307 – 11,864,414	-	5	108	82.05	-1.85	0.69	0.754562
3551	2R_DroMel_CAF1	11,865,423 – 11,865,540	- - - - - - - - -	5778	11,865,423 – 11,865,515	+	5	111	80.00	-1.38	0.85	0.646454
3551	2R_DroMel_CAF1	11,865,423 – 11,865,540	- - - - - - - - -	5779	11,865,444 – 11,865,540	+	6	114	80.85	-1.53	0.68	0.654404
3552	2R_DroMel_CAF1	11,866,054 – 11,866,148	- - - - - - - - -	5780	11,866,054 – 11,866,148	+	6	112	74.26	-1.56	0.53	0.535395
3553	2R_DroMel_CAF1	11,870,413 – 11,870,504	- - - - - - - - -	5781	11,870,413 – 11,870,504	+	5	114	80.84	-2.35	0.83	0.982555
3553	2R_DroMel_CAF1	11,870,413 – 11,870,504	- - - - - - - - -	5782	11,870,413 – 11,870,504	-	5	114	80.84	-2.47	0.72	0.979640
3554	2R_DroMel_CAF1	11,870,616 – 11,870,786	- - - - - - - - -	5783	11,870,616 – 11,870,719	+	3	107	84.13	-1.46	0.88	0.717353
				5784	11,870,616 – 11,870,719	-	3	107	84.13	-2.00	0.82	0.830347
				5785	11,870,653 – 11,870,755	+	3	106	83.97	-2.14	0.91	0.969503
				5786	11,870,653 – 11,870,755	-	3	106	83.97	-3.07	0.92	0.994975
				5787	11,870,679 – 11,870,786	-	6	116	83.04	-2.11	0.70	0.690524
3555	2R_DroMel_CAF1	11,870,994 – 11,871,086	- - - - - - - - -	5788	11,870,994 – 11,871,086	-	6	95	88.03	-2.82	0.75	0.570044
3556	2R_DroMel_CAF1	11,871,861 – 11,871,968	- - - - - - - - -	5789	11,871,861 – 11,871,968	+	6	120	79.05	-1.91	0.64	0.861793
3557	2R_DroMel_CAF1	11,872,473 – 11,872,641	- - - - - - - - -	5790	11,872,473 – 11,872,573	-	6	110	81.09	-1.81	0.65	0.715683
				5791	11,872,499 – 11,872,613	-	6	115	78.58	-2.21	0.48	0.708736
				5792	11,872,538 – 11,872,641	+	6	103	77.60	-2.00	0.57	0.878657
				5793	11,872,538 – 11,872,641	-	6	103	77.60	-1.84	0.62	0.880516
3558	2R_DroMel_CAF1	11,874,160 – 11,874,259	- - - - - - - - -	5794	11,874,160 – 11,874,259	+	6	120	71.42	-2.56	0.56	0.995973
3558	2R_DroMel_CAF1	11,874,160 – 11,874,259	- - - - - - - - -	5795	11,874,160 – 11,874,259	-	6	120	71.42	-3.20	0.59	0.998335
3559	2R_DroMel_CAF1	11,874,476 – 11,874,568	- - - - - - - - -	5796	11,874,476 – 11,874,568	+	6	120	90.13	-1.97	0.89	0.940578
3560	2R_DroMel_CAF1	11,876,072 – 11,876,232	- - - "knownCDS=Parent=FBtr0087151;Name=CG6262-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6262-RB" - - - - -	5797	11,876,072 – 11,876,192	+	6	120	85.06	-2.22	0.73	0.576481
				5798	11,876,072 – 11,876,192	-	6	120	85.06	-2.33	0.78	0.759063
				5799	11,876,112 – 11,876,232	+	6	120	79.44	-1.80	0.71	0.884100
				5800	11,876,112 – 11,876,232	-	6	120	79.44	-1.97	0.66	0.882366
3561	2R_DroMel_CAF1	11,876,858 – 11,876,954	- - - "knownCDS=Parent=FBtr0087153;Name=CG6262-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6262-RC" - - - - -	5801	11,876,858 – 11,876,954	-	5	120	80.94	-1.57	0.77	0.665256
3562	2R_DroMel_CAF1	11,879,576 – 11,879,672	- - - - - - - - -	5802	11,879,576 – 11,879,672	-	4	114	88.60	-1.71	0.81	0.765064
3563	2R_DroMel_CAF1	11,882,279 – 11,882,373	- - - - - - - - -	5803	11,882,279 – 11,882,373	+	5	94	97.23	-2.17	0.89	0.993532
3564	2R_DroMel_CAF1	11,882,405 – 11,882,511	- - - - - - - - -	5804	11,882,405 – 11,882,511	+	6	120	78.10	-1.36	0.65	0.661201
3565	2R_DroMel_CAF1	11,882,998 – 11,883,101	- - - - - - - - -	5805	11,882,998 – 11,883,101	+	5	103	97.77	-2.06	0.90	0.991102
3566	2R_DroMel_CAF1	11,883,713 – 11,883,810	- - - - - - - - -	5806	11,883,713 – 11,883,810	+	5	116	86.69	-1.53	0.77	0.557443
3566	2R_DroMel_CAF1	11,883,713 – 11,883,810	- - - - - - - - -	5807	11,883,713 – 11,883,810	-	5	116	86.69	-1.80	0.73	0.686518
3567	2R_DroMel_CAF1	11,885,583 – 11,885,679	- - - - - - - - -	5808	11,885,583 – 11,885,679	+	5	100	90.95	-2.67	0.78	0.984451
3567	2R_DroMel_CAF1	11,885,583 – 11,885,679	- - - - - - - - -	5809	11,885,583 – 11,885,679	-	5	100	90.95	-2.31	0.88	0.998074
3568	2R_DroMel_CAF1	11,889,766 – 11,889,900	- - - - - - - - -	5810	11,889,766 – 11,889,861	+	4	103	92.89	-3.13	0.80	0.922956
				5811	11,889,766 – 11,889,861	-	4	103	92.89	-3.20	0.83	0.962755
				5812	11,889,790 – 11,889,900	+	4	112	96.83	-2.83	0.97	0.984877
				5813	11,889,790 – 11,889,900	-	4	112	96.83	-2.13	0.96	0.928907
3569	2R_DroMel_CAF1	11,890,387 – 11,890,503	- - - - - - - - -	5814	11,890,387 – 11,890,503	-	6	120	93.02	-1.65	0.84	0.506190
3570	2R_DroMel_CAF1	11,891,100 – 11,891,290	- - - - - - - - -	5815	11,891,100 – 11,891,211	-	5	120	85.51	-2.45	0.78	0.970368
				5816	11,891,131 – 11,891,251	+	5	120	92.17	-3.59	0.78	0.995246
				5817	11,891,131 – 11,891,251	-	5	120	92.17	-3.52	0.68	0.766577
				5818	11,891,171 – 11,891,290	-	5	120	95.98	-2.11	0.91	0.997619
3571	2R_DroMel_CAF1	11,892,323 – 11,892,435	- - - - - - - - -	5819	11,892,323 – 11,892,435	-	4	114	87.26	-2.09	0.70	0.795298
3572	2R_DroMel_CAF1	11,892,676 – 11,892,796	- - - - - - - - -	5820	11,892,676 – 11,892,796	+	4	120	86.99	-1.71	0.91	0.862676
3573	2R_DroMel_CAF1	11,893,083 – 11,893,217	- - - - - - - - -	5821	11,893,083 – 11,893,198	-	6	120	95.42	-1.95	0.90	0.984912
3573	2R_DroMel_CAF1	11,893,083 – 11,893,217	- - - - - - - - -	5822	11,893,123 – 11,893,217	+	6	120	81.43	-1.26	0.74	0.554763
3574	2R_DroMel_CAF1	11,894,710 – 11,894,820	- - - - - - - - -	5823	11,894,710 – 11,894,820	+	5	116	93.77	-1.62	0.91	0.975322
3574	2R_DroMel_CAF1	11,894,710 – 11,894,820	- - - - - - - - -	5824	11,894,710 – 11,894,820	-	5	116	93.77	-1.92	0.96	0.998897
3575	2R_DroMel_CAF1	11,897,520 – 11,897,816	- - - - - - - - -	5825	11,897,520 – 11,897,637	+	4	120	85.47	-1.67	0.64	0.518415
				5826	11,897,520 – 11,897,637	-	4	120	85.47	-1.49	0.69	0.531315
				5827	11,897,600 – 11,897,716	+	4	120	84.56	-1.91	0.69	0.773556
				5828	11,897,716 – 11,897,816	+	5	120	86.72	-2.62	0.76	0.973818
3576	2R_DroMel_CAF1	11,899,909 – 11,900,013	- - - - - - - - -	5829	11,899,909 – 11,900,013	-	3	106	68.67	-2.22	0.50	0.970870
3577	2R_DroMel_CAF1	11,904,639 – 11,904,751	- - - - - - - - -	5830	11,904,639 – 11,904,751	+	3	112	95.83	-3.32	0.90	0.964237
3578	2R_DroMel_CAF1	11,908,456 – 11,908,546	- - - - - - - - -	5831	11,908,456 – 11,908,546	-	6	92	74.65	-2.20	0.34	0.612616
3579	2R_DroMel_CAF1	11,911,631 – 11,911,734	- - - - - - - - -	5832	11,911,631 – 11,911,734	-	6	117	78.54	-2.88	0.65	0.981743
3580	2R_DroMel_CAF1	11,911,802 – 11,911,899	- - - - - - - - -	5833	11,911,802 – 11,911,899	-	5	117	81.10	-2.42	0.47	0.818354
3581	2R_DroMel_CAF1	11,918,142 – 11,918,243	- - - - - - - - -	5834	11,918,142 – 11,918,243	-	5	120	76.02	-1.66	0.21	0.633767
3582	2R_DroMel_CAF1	11,920,102 – 11,920,195	- - - - - - - - -	5835	11,920,102 – 11,920,195	+	5	98	90.70	-2.76	0.75	0.961979
3582	2R_DroMel_CAF1	11,920,102 – 11,920,195	- - - - - - - - -	5836	11,920,102 – 11,920,195	-	5	98	90.70	-2.01	0.83	0.969018
3583	2R_DroMel_CAF1	11,928,354 – 11,928,493	- - - - - - - - -	5837	11,928,354 – 11,928,459	+	6	117	77.64	-1.85	0.68	0.930957
				5838	11,928,382 – 11,928,493	+	6	117	79.41	-2.98	0.52	0.962902
				5839	11,928,382 – 11,928,493	-	6	117	79.41	-3.41	0.51	0.981449
3584	2R_DroMel_CAF1	11,931,647 – 11,931,756	- - - "knownCDS=Parent=FBtr0100601, FBtr0100603;Name=Menl-2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7969-RA, FlyBase+Annotation+IDs:CG7969-RC" - - - - -	5840	11,931,647 – 11,931,756	-	6	111	83.79	-1.93	0.77	0.679629
3585	2R_DroMel_CAF1	11,932,236 – 11,932,411	- - - "knownCDS=Parent=FBtr0100114;Name=Menl-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7964-RA" - - - - -	5841	11,932,236 – 11,932,332	+	6	116	67.59	-1.65	0.40	0.568673
				5842	11,932,236 – 11,932,332	-	6	116	67.59	-1.48	0.52	0.723292
				5843	11,932,294 – 11,932,411	+	6	117	78.52	-1.43	0.63	0.602444
3586	2R_DroMel_CAF1	11,933,701 – 11,933,820	- - - "knownCDS=Parent=FBtr0100116;Name=Menl-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7964-RC" - - - - -	5844	11,933,701 – 11,933,820	-	6	120	82.68	-2.31	0.64	0.691169
3587	2R_DroMel_CAF1	11,938,710 – 11,938,824	- - - - - - - - -	5845	11,938,710 – 11,938,805	+	6	105	82.42	-3.09	0.88	0.977921
				5846	11,938,710 – 11,938,805	-	6	105	82.42	-1.31	0.84	0.552871
				5847	11,938,730 – 11,938,824	+	6	99	85.66	-2.75	0.87	0.969878
3588	2R_DroMel_CAF1	11,941,142 – 11,941,242	- - - - - - - - -	5848	11,941,142 – 11,941,242	+	5	101	89.81	-2.10	0.82	0.973631
3588	2R_DroMel_CAF1	11,941,142 – 11,941,242	- - - - - - - - -	5849	11,941,142 – 11,941,242	-	5	101	89.81	-1.36	0.91	0.771048
3589	2R_DroMel_CAF1	11,953,982 – 11,954,188	- - - - - - - - -	5850	11,953,982 – 11,954,082	-	6	113	78.25	-1.80	0.69	0.912332
3589	2R_DroMel_CAF1	11,953,982 – 11,954,188	- - - - - - - - -	5851	11,954,082 – 11,954,188	-	5	110	94.55	-1.90	0.81	0.891332
3590	2R_DroMel_CAF1	11,959,196 – 11,959,295	- - - "knownCDS=Parent=FBtr0087158;Name=CG4409-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4409-RA" - - - - -	5852	11,959,196 – 11,959,295	+	6	108	92.13	-1.48	0.86	0.550895
3590	2R_DroMel_CAF1	11,959,196 – 11,959,295		5853	11,959,196 – 11,959,295	-	6	108	92.13	-2.33	0.79	0.508797
3591	2R_DroMel_CAF1	11,961,172 – 11,961,271	- - - "knownCDS=Parent=FBtr0087159;Name=CG15925-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15925-RA" - - - - -	5854	11,961,172 – 11,961,271	+	6	120	75.85	-1.72	0.52	0.635728
3592	2R_DroMel_CAF1	11,962,479 – 11,962,583	- - - - - - - - -	5855	11,962,479 – 11,962,583	-	6	111	93.98	-1.59	0.87	0.795566
3593	2R_DroMel_CAF1	11,968,541 – 11,968,650	- - - - - - - - -	5856	11,968,541 – 11,968,650	+	6	111	79.25	-1.71	0.69	0.848791
3593	2R_DroMel_CAF1	11,968,541 – 11,968,650	- - - - - - - - -	5857	11,968,541 – 11,968,650	-	6	111	79.25	-1.91	0.80	0.929465
3594	2R_DroMel_CAF1	11,970,441 – 11,970,556	- - - - - - - - -	5858	11,970,441 – 11,970,556	-	6	115	98.38	-1.88	0.96	0.998200
3595	2R_DroMel_CAF1	11,972,663 – 11,972,753	- - - - - - - - -	5859	11,972,663 – 11,972,753	-	6	115	78.32	-1.62	0.74	0.899957
3596	2R_DroMel_CAF1	11,972,786 – 11,972,879	- - - - - - - - -	5860	11,972,786 – 11,972,879	-	6	109	76.18	-1.83	0.50	0.649572
3597	2R_DroMel_CAF1	11,973,483 – 11,973,588	- - - - - - - - -	5861	11,973,483 – 11,973,588	-	6	120	77.69	-1.43	0.66	0.740467
3598	2R_DroMel_CAF1	11,977,648 – 11,977,746	- - - - - - - - -	5862	11,977,648 – 11,977,746	+	6	101	78.70	-2.39	0.52	0.890993
3598	2R_DroMel_CAF1	11,977,648 – 11,977,746	- - - - - - - - -	5863	11,977,648 – 11,977,746	-	6	101	78.70	-3.03	0.53	0.979449
3599	2R_DroMel_CAF1	11,977,852 – 11,977,943	- - - - - - - - -	5864	11,977,852 – 11,977,943	+	6	92	97.88	-1.40	0.96	0.984915
3599	2R_DroMel_CAF1	11,977,852 – 11,977,943	- - - - - - - - -	5865	11,977,852 – 11,977,943	-	6	92	97.88	-1.01	0.97	0.876904
3600	2R_DroMel_CAF1	11,978,326 – 11,978,428	- - - - - - - - -	5866	11,978,326 – 11,978,428	-	6	120	77.08	-1.64	0.63	0.835426
3601	2R_DroMel_CAF1	11,978,731 – 11,978,831	- - - - - - - - -	5867	11,978,731 – 11,978,831	+	4	101	78.06	-2.99	0.48	0.951573
3602	2R_DroMel_CAF1	11,979,194 – 11,979,328	- - - - - - - - -	5868	11,979,194 – 11,979,288	+	6	120	78.55	-1.71	0.69	0.879725
3602	2R_DroMel_CAF1	11,979,194 – 11,979,328	- - - - - - - - -	5869	11,979,208 – 11,979,328	+	6	120	80.31	-1.90	0.70	0.852542
3603	2R_DroMel_CAF1	11,984,691 – 11,984,799	- - - - - - - - -	5870	11,984,691 – 11,984,799	+	5	111	71.10	-2.52	0.46	0.997238
3603	2R_DroMel_CAF1	11,984,691 – 11,984,799	- - - - - - - - -	5871	11,984,691 – 11,984,799	-	5	111	71.10	-1.70	0.56	0.805914
3604	2R_DroMel_CAF1	11,985,376 – 11,985,473	- - - - - - - - -	5872	11,985,376 – 11,985,473	-	6	118	77.62	-1.66	0.57	0.627500
3605	2R_DroMel_CAF1	11,985,871 – 11,985,966	- - - - - - - - -	5873	11,985,871 – 11,985,966	+	6	118	81.86	-2.15	0.82	0.896028
3605	2R_DroMel_CAF1	11,985,871 – 11,985,966	- - - - - - - - -	5874	11,985,871 – 11,985,966	-	6	118	81.86	-3.47	0.81	0.961431
3606	2R_DroMel_CAF1	11,986,639 – 11,986,744	- - - - - - - - -	5875	11,986,639 – 11,986,744	-	5	113	86.02	-2.90	0.55	0.610787
3607	2R_DroMel_CAF1	11,987,212 – 11,987,313	- - - - - - - - -	5876	11,987,212 – 11,987,313	+	6	106	90.82	-2.86	0.77	0.654371
3608	2R_DroMel_CAF1	11,987,738 – 11,987,829	- - - - - - - - -	5877	11,987,738 – 11,987,829	-	6	106	79.14	-2.26	0.44	0.540537
3609	2R_DroMel_CAF1	11,988,414 – 11,988,504	- - - - - - - - -	5878	11,988,414 – 11,988,504	-	6	103	82.40	-1.44	0.70	0.523094
3610	2R_DroMel_CAF1	11,989,650 – 11,989,750	- - - - - - - - -	5879	11,989,650 – 11,989,750	+	6	100	82.61	-3.00	0.56	0.775898
3610	2R_DroMel_CAF1	11,989,650 – 11,989,750	- - - - - - - - -	5880	11,989,650 – 11,989,750	-	6	100	82.61	-2.41	0.59	0.631656
3611	2R_DroMel_CAF1	11,990,712 – 11,990,811	- - - - - - - - -	5881	11,990,712 – 11,990,811	+	6	117	75.47	-1.94	0.53	0.857997
3611	2R_DroMel_CAF1	11,990,712 – 11,990,811	- - - - - - - - -	5882	11,990,712 – 11,990,811	-	6	117	75.47	-1.93	0.58	0.929941
3612	2R_DroMel_CAF1	11,993,061 – 11,993,169	- - - - - - - - -	5883	11,993,061 – 11,993,169	+	6	110	90.94	-1.89	0.81	0.506293
3613	2R_DroMel_CAF1	11,993,987 – 11,994,125	- - - - - - - - -	5884	11,993,987 – 11,994,089	-	6	118	81.32	-1.79	0.60	0.550164
3613	2R_DroMel_CAF1	11,993,987 – 11,994,125	- - - - - - - - -	5885	11,994,027 – 11,994,125	-	6	107	76.24	-1.30	0.78	0.901329
3614	2R_DroMel_CAF1	11,997,560 – 11,997,658	- - - - - - - - -	5886	11,997,560 – 11,997,658	+	6	115	86.61	-1.93	0.83	0.706590
3615	2R_DroMel_CAF1	11,998,870 – 11,998,969	- - - - - - - - -	5887	11,998,870 – 11,998,969	+	4	99	97.47	-2.35	0.93	0.915293
3616	2R_DroMel_CAF1	11,998,992 – 11,999,094	- - - - - - - - -	5888	11,998,992 – 11,999,094	+	6	116	79.28	-2.09	0.57	0.822518
3617	2R_DroMel_CAF1	11,999,109 – 11,999,211	- - - - - - - - -	5889	11,999,109 – 11,999,211	-	6	109	79.68	-1.83	0.56	0.586891
3618	2R_DroMel_CAF1	12,002,393 – 12,002,513	- - - "knownCDS=Parent=FBtr0087085;Name=CG33458-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33458-RA" - - - - -	5890	12,002,393 – 12,002,513	+	5	120	86.58	-2.00	0.83	0.937427
3619	2R_DroMel_CAF1	12,004,934 – 12,005,083	- - - - - - - - -	5891	12,004,934 – 12,005,043	-	5	117	84.97	-3.94	0.63	0.986941
				5892	12,004,973 – 12,005,083	+	6	119	77.66	-2.65	0.33	0.651272
				5893	12,004,973 – 12,005,083	-	6	119	77.66	-2.65	0.32	0.631124
3620	2R_DroMel_CAF1	12,009,172 – 12,009,273	- - - - - - - - -	5894	12,009,172 – 12,009,273	+	6	102	84.62	-2.20	0.72	0.574719
3620	2R_DroMel_CAF1	12,009,172 – 12,009,273	- - - - - - - - -	5895	12,009,172 – 12,009,273	-	6	102	84.62	-2.50	0.75	0.749509
3621	2R_DroMel_CAF1	12,009,664 – 12,009,770	- - - - - - - - -	5896	12,009,664 – 12,009,770	+	5	106	95.19	-1.70	0.79	0.648511
3622	2R_DroMel_CAF1	12,010,967 – 12,011,065	- - - - - - - - -	5897	12,010,967 – 12,011,065	+	5	98	95.31	-1.14	1.01	0.820111
3623	2R_DroMel_CAF1	12,011,905 – 12,011,998	- - - "knownCDS=Parent=FBtr0087126;Name=CG7813-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7813-RA" - - - - -	5898	12,011,905 – 12,011,998	+	6	93	70.62	-1.71	0.40	0.505123
3624	2R_DroMel_CAF1	12,014,065 – 12,014,182	- - - "knownCDS=Parent=FBtr0087126;Name=CG7813-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7813-RA" - - - - -	5899	12,014,065 – 12,014,182	-	6	119	81.42	-1.69	0.65	0.626848
3625	2R_DroMel_CAF1	12,018,870 – 12,018,966	- - - - - - - - -	5900	12,018,870 – 12,018,966	-	6	96	98.38	-1.79	0.99	0.999210
3626	2R_DroMel_CAF1	12,019,875 – 12,019,970	- - - - - - - - -	5901	12,019,875 – 12,019,970	-	6	108	78.33	-1.53	0.66	0.777062
3627	2R_DroMel_CAF1	12,022,349 – 12,022,449	- - - - - - - - -	5902	12,022,349 – 12,022,449	-	6	111	78.68	-1.88	0.53	0.607508
3628	2R_DroMel_CAF1	12,025,255 – 12,025,347	- - - - - - - - -	5903	12,025,255 – 12,025,347	+	6	101	76.48	-2.29	0.58	0.970503
3628	2R_DroMel_CAF1	12,025,255 – 12,025,347	- - - - - - - - -	5904	12,025,255 – 12,025,347	-	6	101	76.48	-1.98	0.69	0.966127
3629	2R_DroMel_CAF1	12,026,943 – 12,027,046	- - - - - - - - -	5905	12,026,943 – 12,027,046	-	5	114	73.68	-1.76	0.52	0.716607
3630	2R_DroMel_CAF1	12,027,999 – 12,028,093	- - - - - - - - -	5906	12,027,999 – 12,028,093	+	6	119	75.15	-1.70	0.50	0.545964
3630	2R_DroMel_CAF1	12,027,999 – 12,028,093	- - - - - - - - -	5907	12,027,999 – 12,028,093	-	6	119	75.15	-1.58	0.66	0.909961
3631	2R_DroMel_CAF1	12,028,150 – 12,028,245	- - - - - - - - -	5908	12,028,150 – 12,028,245	+	5	103	84.51	-2.74	0.52	0.659734
3632	2R_DroMel_CAF1	12,029,580 – 12,029,703	- - - - - - - - -	5909	12,029,580 – 12,029,679	+	6	120	76.64	-2.15	0.69	0.976091
				5910	12,029,580 – 12,029,679	-	6	120	76.64	-2.77	0.71	0.989428
				5911	12,029,608 – 12,029,703	+	6	120	78.93	-1.60	0.71	0.851756
				5912	12,029,608 – 12,029,703	-	6	120	78.93	-1.73	0.69	0.873057
3633	2R_DroMel_CAF1	12,030,550 – 12,030,651	- - - - - - - - -	5913	12,030,550 – 12,030,651	+	5	101	96.04	-1.33	0.92	0.844533
3633	2R_DroMel_CAF1	12,030,550 – 12,030,651	- - - - - - - - -	5914	12,030,550 – 12,030,651	-	5	101	96.04	-1.17	0.91	0.570348
3634	2R_DroMel_CAF1	12,032,018 – 12,032,127	- - - "knownCDS=Parent=FBtr0087089;Name=Sema-2a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4700-RB" - - - - -	5915	12,032,018 – 12,032,127	-	6	109	82.55	-2.05	0.72	0.756145
3635	2R_DroMel_CAF1	12,036,440 – 12,036,541	- - - - - - - - -	5916	12,036,440 – 12,036,541	+	5	109	84.35	-2.24	0.64	0.767738
3636	2R_DroMel_CAF1	12,044,002 – 12,044,121	- - - "knownCDS=Parent=FBtr0087088, FBtr0087089, FBtr0087090, FBtr0087091;Name=Sema-2a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4700-RC, FlyBase+Annotation+IDs:CG4700-RB, FlyBase+Annotation+IDs:CG4700-RA, FlyBase+Annotation+IDs:CG4700-RD" - - - - -	5917	12,044,002 – 12,044,121	-	6	119	81.40	-1.68	0.65	0.632246
3637	2R_DroMel_CAF1	12,053,660 – 12,053,753	- - - - - - - - -	5918	12,053,660 – 12,053,753	+	3	99	87.97	-3.25	0.63	0.691736
3638	2R_DroMel_CAF1	12,054,262 – 12,054,409	- - - - - - - - -	5919	12,054,262 – 12,054,376	+	6	120	78.83	-2.71	0.76	0.972977
3638	2R_DroMel_CAF1	12,054,262 – 12,054,409	- - - - - - - - -	5920	12,054,297 – 12,054,409	+	6	116	89.29	-2.94	0.80	0.880308
3639	2R_DroMel_CAF1	12,073,554 – 12,073,766	- - - - - - - - -	5921	12,073,554 – 12,073,652	-	6	100	79.21	-3.00	1.01	0.987044
				5922	12,073,585 – 12,073,692	-	6	109	86.36	-2.00	0.93	0.967010
				5923	12,073,652 – 12,073,766	+	6	120	78.69	-2.68	0.72	0.974951
				5924	12,073,652 – 12,073,766	-	6	120	78.69	-3.08	0.68	0.982612
3640	2R_DroMel_CAF1	12,075,076 – 12,075,219	- - - - - - - - -	5925	12,075,076 – 12,075,191	-	6	120	75.23	-1.77	0.71	0.966833
3640	2R_DroMel_CAF1	12,075,076 – 12,075,219	- - - - - - - - -	5926	12,075,116 – 12,075,219	+	6	110	76.22	-1.62	0.64	0.859802
3641	2R_DroMel_CAF1	12,075,312 – 12,075,432	- - - "knownCDS=Parent=FBtr0087125;Name=DAT-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8380-RA" - - - - -	5927	12,075,312 – 12,075,432	-	6	120	77.94	-1.60	0.56	0.531082
3642	2R_DroMel_CAF1	12,078,042 – 12,078,145	- - - - - - - - -	5928	12,078,042 – 12,078,145	-	6	120	83.99	-1.56	0.79	0.548499
3643	2R_DroMel_CAF1	12,087,929 – 12,088,019	- - - - - - - - -	5929	12,087,929 – 12,088,019	+	3	112	82.69	-1.85	0.80	0.796091
3643	2R_DroMel_CAF1	12,087,929 – 12,088,019	- - - - - - - - -	5930	12,087,929 – 12,088,019	-	3	112	82.69	-2.06	0.84	0.914836
3644	2R_DroMel_CAF1	12,092,386 – 12,092,476	- - - - - - - - -	5931	12,092,386 – 12,092,476	+	5	102	89.02	-1.36	0.84	0.572706
3644	2R_DroMel_CAF1	12,092,386 – 12,092,476	- - - - - - - - -	5932	12,092,386 – 12,092,476	-	5	102	89.02	-2.13	0.81	0.961804
3645	2R_DroMel_CAF1	12,093,699 – 12,093,815	- - - - - - - - -	5933	12,093,699 – 12,093,815	+	5	118	82.07	-1.80	0.60	0.512703
3646	2R_DroMel_CAF1	12,095,325 – 12,095,415	- - - - - - - - -	5934	12,095,325 – 12,095,415	+	4	99	80.10	-2.52	0.65	0.980968
3646	2R_DroMel_CAF1	12,095,325 – 12,095,415	- - - - - - - - -	5935	12,095,325 – 12,095,415	-	4	99	80.10	-1.72	0.75	0.768880
3647	2R_DroMel_CAF1	12,101,099 – 12,101,299	- - - "knownCDS=Parent=FBtr0087106;Name=RpLP2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4918-RB" - - - - -	5936	12,101,099 – 12,101,219	-	5	120	94.67	-1.48	0.83	0.672201
				5937	12,101,179 – 12,101,299	+	5	120	95.67	-1.64	0.87	0.934677
				5938	12,101,179 – 12,101,299	-	5	120	95.67	-2.03	0.89	0.994085
3648	2R_DroMel_CAF1	12,102,146 – 12,102,425	- - - "knownCDS=Parent=FBtr0087121;Name=CG8311-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8311-RA" - - - - -	5939	12,102,146 – 12,102,240	+	6	96	81.82	-1.41	0.68	0.529098
				5940	12,102,200 – 12,102,320	-	6	120	79.44	-1.73	0.58	0.629404
				5941	12,102,240 – 12,102,360	-	6	120	77.61	-1.86	0.53	0.685884
				5942	12,102,280 – 12,102,397	-	6	117	82.45	-2.47	0.73	0.856369
				5943	12,102,320 – 12,102,425	-	6	108	78.24	-1.34	0.66	0.656736
3649	2R_DroMel_CAF1	12,103,197 – 12,103,305	- - - "knownCDS=Parent=FBtr0087121;Name=CG8311-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8311-RA" - - - - -	5944	12,103,197 – 12,103,305	-	6	108	80.99	-1.22	0.72	0.546621
3650	2R_DroMel_CAF1	12,103,946 – 12,104,065	- - - - - - - - -	5945	12,103,946 – 12,104,065	+	3	120	89.97	-2.41	0.77	0.683465
3651	2R_DroMel_CAF1	12,108,540 – 12,108,640	- - - - - - - - -	5946	12,108,540 – 12,108,640	-	5	109	71.13	-1.53	0.09	0.511495
3652	2R_DroMel_CAF1	12,111,285 – 12,111,383	- - - "knownCDS=Parent=FBtr0087119;Name=CG8303-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8303-RA" - - - - -	5947	12,111,285 – 12,111,383	-	6	108	80.10	-1.68	0.63	0.676561
3653	2R_DroMel_CAF1	12,115,504 – 12,115,598	- - - - - - - - -	5948	12,115,504 – 12,115,598	-	3	104	68.42	-2.01	0.47	0.694654
3654	2R_DroMel_CAF1	12,120,314 – 12,120,404	- - - - - - - - -	5949	12,120,314 – 12,120,404	+	4	90	84.44	-2.31	0.74	0.941279
3655	2R_DroMel_CAF1	12,127,833 – 12,127,932	- - - - - - - - -	5950	12,127,833 – 12,127,932	+	4	99	84.01	-1.57	0.69	0.574831
3656	2R_DroMel_CAF1	12,132,163 – 12,132,257	- - - - - - - - -	5951	12,132,163 – 12,132,257	+	6	101	86.68	-1.75	0.87	0.758022
3657	2R_DroMel_CAF1	12,135,197 – 12,135,293	- - - - - - - - -	5952	12,135,197 – 12,135,293	-	6	96	69.48	-2.33	0.26	0.839105
3658	2R_DroMel_CAF1	12,137,187 – 12,137,307	- - - "knownCDS=Parent=FBtr0087108;Name=CG5065-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5065-RA" - - - - -	5953	12,137,187 – 12,137,307	-	6	120	92.44	-1.92	0.86	0.875199
3659	2R_DroMel_CAF1	12,141,636 – 12,141,729	- - - - - - - - -	5954	12,141,636 – 12,141,729	+	3	106	71.66	-1.71	0.81	0.998367
3660	2R_DroMel_CAF1	12,144,450 – 12,144,585	- - - "knownCDS=Parent=FBtr0087118;Name=Alk-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8250-RA" - - - - -	5955	12,144,450 – 12,144,545	-	6	107	83.84	-1.55	0.75	0.500000
3660	2R_DroMel_CAF1	12,144,450 – 12,144,585		5956	12,144,478 – 12,144,585	-	6	116	80.12	-1.35	0.70	0.652790
3661	2R_DroMel_CAF1	12,153,492 – 12,153,583	- - - - - - - - -	5957	12,153,492 – 12,153,583	+	5	98	90.50	-1.66	0.79	0.757811
3661	2R_DroMel_CAF1	12,153,492 – 12,153,583	- - - - - - - - -	5958	12,153,492 – 12,153,583	-	5	98	90.50	-1.75	0.75	0.648915
3662	2R_DroMel_CAF1	12,156,924 – 12,157,020	- - - - - - - - -	5959	12,156,924 – 12,157,020	+	4	96	71.12	-2.82	0.53	0.999034
3662	2R_DroMel_CAF1	12,156,924 – 12,157,020	- - - - - - - - -	5960	12,156,924 – 12,157,020	-	4	96	71.12	-2.78	0.40	0.937534
3663	2R_DroMel_CAF1	12,163,052 – 12,163,160	- - - "knownCDS=Parent=FBtr0087109;Name=gprs-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18471-RA" - - - - -	5961	12,163,052 – 12,163,160	-	6	108	82.35	-2.68	0.64	0.818013
3664	2R_DroMel_CAF1	12,163,674 – 12,163,776	- - - - - - - - -	5962	12,163,674 – 12,163,776	+	4	118	70.88	-1.49	0.62	0.732836
3665	2R_DroMel_CAF1	12,171,969 – 12,172,076	- - - "knownCDS=Parent=FBtr0087114, FBtr0087115;Name=Picot-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8098-RA, FlyBase+Annotation+IDs:CG8098-RB" - - - - -	5963	12,171,969 – 12,172,076	-	6	107	79.07	-1.26	0.68	0.619940
3666	2R_DroMel_CAF1	12,174,562 – 12,174,652	- - - - - - - - -	5964	12,174,562 – 12,174,652	-	4	101	83.97	-1.88	0.70	0.775113
3667	2R_DroMel_CAF1	12,200,380 – 12,200,474	- - - - - - - - -	5965	12,200,380 – 12,200,474	-	6	96	81.97	-1.94	0.60	0.566096
3668	2R_DroMel_CAF1	12,201,267 – 12,201,371	- - - - - - - - -	5966	12,201,267 – 12,201,371	-	3	104	90.38	-2.08	0.86	0.730976
3669	2R_DroMel_CAF1	12,203,014 – 12,203,104	- - - - - - - - -	5967	12,203,014 – 12,203,104	+	5	91	75.56	-2.34	0.38	0.977546
3669	2R_DroMel_CAF1	12,203,014 – 12,203,104	- - - - - - - - -	5968	12,203,014 – 12,203,104	-	5	91	75.56	-2.41	0.53	0.989389
3670	2R_DroMel_CAF1	12,213,395 – 12,213,497	- - - - - - - - -	5969	12,213,395 – 12,213,497	+	6	105	81.65	-2.92	0.76	0.937133
3670	2R_DroMel_CAF1	12,213,395 – 12,213,497	- - - - - - - - -	5970	12,213,395 – 12,213,497	-	6	105	81.65	-2.93	0.69	0.921911
3671	2R_DroMel_CAF1	12,214,750 – 12,214,841	- - - - - - - - -	5971	12,214,750 – 12,214,841	+	6	106	80.04	-1.38	0.76	0.736545
3671	2R_DroMel_CAF1	12,214,750 – 12,214,841	- - - - - - - - -	5972	12,214,750 – 12,214,841	-	6	106	80.04	-1.69	0.60	0.595332
3672	2R_DroMel_CAF1	12,215,412 – 12,215,507	- - - - - - - - -	5973	12,215,412 – 12,215,507	+	6	97	76.79	-1.50	0.67	0.846065
3673	2R_DroMel_CAF1	12,218,068 – 12,218,211	- - - - - - - - -	5974	12,218,068 – 12,218,171	+	6	119	79.98	-2.14	0.53	0.691929
				5975	12,218,068 – 12,218,171	-	6	119	79.98	-3.21	0.61	0.972696
				5976	12,218,105 – 12,218,211	-	5	108	87.09	-1.73	0.73	0.622879
3674	2R_DroMel_CAF1	12,219,474 – 12,219,564	- - - - - - - - -	5977	12,219,474 – 12,219,564	-	6	95	82.37	-2.37	0.67	0.786918
3675	2R_DroMel_CAF1	12,221,629 – 12,221,782	- - - - - - - - -	5978	12,221,629 – 12,221,749	+	5	120	83.31	-2.58	0.64	0.927109
3675	2R_DroMel_CAF1	12,221,629 – 12,221,782	- - - - - - - - -	5979	12,221,669 – 12,221,782	+	4	113	87.14	-1.78	0.73	0.718592
3676	2R_DroMel_CAF1	12,223,016 – 12,223,109	- - - - - - - - -	5980	12,223,016 – 12,223,109	+	6	109	79.53	-1.75	0.58	0.615133
3677	2R_DroMel_CAF1	12,225,620 – 12,225,740	- - - - - - - - -	5981	12,225,620 – 12,225,740	+	5	120	92.75	-1.35	0.90	0.837560
3678	2R_DroMel_CAF1	12,226,811 – 12,226,912	- - - - - - - - -	5982	12,226,811 – 12,226,912	-	6	120	82.17	-2.94	0.47	0.613814
3679	2R_DroMel_CAF1	12,229,483 – 12,229,578	- - - - - - - - -	5983	12,229,483 – 12,229,578	+	4	117	79.25	-1.81	0.66	0.748755
3679	2R_DroMel_CAF1	12,229,483 – 12,229,578	- - - - - - - - -	5984	12,229,483 – 12,229,578	-	4	117	79.25	-1.93	0.58	0.629698
3680	2R_DroMel_CAF1	12,232,753 – 12,232,851	- - - - - - - - -	5985	12,232,753 – 12,232,851	+	6	105	77.41	-2.29	0.63	0.968712
3681	2R_DroMel_CAF1	12,233,910 – 12,234,006	- - - - - - - - -	5986	12,233,910 – 12,234,006	+	6	113	74.04	-2.49	0.57	0.992431
3681	2R_DroMel_CAF1	12,233,910 – 12,234,006	- - - - - - - - -	5987	12,233,910 – 12,234,006	-	6	113	74.04	-2.48	0.50	0.987318
3682	2R_DroMel_CAF1	12,234,962 – 12,235,054	- - - - - - - - -	5988	12,234,962 – 12,235,054	-	4	98	94.51	-2.08	0.90	0.934076
3683	2R_DroMel_CAF1	12,237,293 – 12,237,386	- - - - - - - - -	5989	12,237,293 – 12,237,386	+	5	93	92.90	-1.63	0.80	0.773587
3684	2R_DroMel_CAF1	12,237,415 – 12,237,524	- - - - - - - - -	5990	12,237,415 – 12,237,524	-	6	118	76.17	-1.44	0.59	0.589243
3685	2R_DroMel_CAF1	12,238,013 – 12,238,177	- - - - - - - - -	5991	12,238,013 – 12,238,108	-	6	99	78.97	-1.95	0.53	0.632856
				5992	12,238,074 – 12,238,177	+	6	111	81.63	-3.75	0.44	0.903932
				5993	12,238,074 – 12,238,177	-	6	111	81.63	-3.01	0.41	0.542082
3686	2R_DroMel_CAF1	12,239,644 – 12,239,752	- - - - - - - - -	5994	12,239,644 – 12,239,752	-	5	117	80.44	-2.52	0.57	0.954554
3687	2R_DroMel_CAF1	12,241,066 – 12,241,179	- - - - - - - - -	5995	12,241,066 – 12,241,179	+	6	118	75.60	-1.92	0.47	0.654772
3688	2R_DroMel_CAF1	12,242,288 – 12,242,379	- - - - - - - - -	5996	12,242,288 – 12,242,379	+	6	119	71.68	-1.92	0.39	0.715727
3689	2R_DroMel_CAF1	12,243,459 – 12,243,549	- - - - - - - - -	5997	12,243,459 – 12,243,549	+	6	91	83.32	-2.16	0.71	0.690088
3690	2R_DroMel_CAF1	12,243,915 – 12,244,021	- - - - - - - - -	5998	12,243,915 – 12,244,021	-	5	106	76.94	-1.66	0.16	0.668954
3691	2R_DroMel_CAF1	12,246,561 – 12,246,651	- - - - - - - - -	5999	12,246,561 – 12,246,651	+	3	93	88.85	-2.18	0.76	0.607796
3692	2R_DroMel_CAF1	12,248,392 – 12,248,482	- - - - - - - - -	6000	12,248,392 – 12,248,482	-	5	102	92.41	-1.61	0.76	0.544116
3693	2R_DroMel_CAF1	12,248,519 – 12,248,679	- - - - - - - - -	6001	12,248,519 – 12,248,620	+	6	113	76.70	-2.20	0.69	0.977762
				6002	12,248,519 – 12,248,620	-	6	113	76.70	-2.15	0.44	0.726499
				6003	12,248,545 – 12,248,644	+	6	115	78.73	-1.48	0.60	0.538962
				6004	12,248,580 – 12,248,679	+	6	118	79.69	-1.54	0.73	0.810214
				6005	12,248,580 – 12,248,679	-	6	118	79.69	-1.30	0.68	0.599431
3694	2R_DroMel_CAF1	12,263,463 – 12,263,559	- - - - - - - - -	6006	12,263,463 – 12,263,559	-	6	108	72.36	-1.99	0.44	0.847934
3695	2R_DroMel_CAF1	12,270,873 – 12,270,967	- - - - - - - - -	6007	12,270,873 – 12,270,967	-	6	101	78.69	-0.96	0.79	0.592057
3696	2R_DroMel_CAF1	12,272,729 – 12,272,836	- - - - - - - - -	6008	12,272,729 – 12,272,836	-	6	111	76.37	-1.14	0.67	0.617439
3697	2R_DroMel_CAF1	12,274,966 – 12,275,086	- - - "knownCDS=Parent=FBtr0087079;Name=unc-104-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8566-RD" - - - - -	6009	12,274,966 – 12,275,086	+	6	120	80.11	-1.86	0.58	0.629050
3698	2R_DroMel_CAF1	12,275,423 – 12,275,526	- - - - - - - - -	6010	12,275,423 – 12,275,526	+	6	104	74.28	-1.83	0.65	0.962843
3698	2R_DroMel_CAF1	12,275,423 – 12,275,526	- - - - - - - - -	6011	12,275,423 – 12,275,526	-	6	104	74.28	-1.55	0.65	0.899326
3699	2R_DroMel_CAF1	12,276,492 – 12,276,598	- - - - - - - - -	6012	12,276,492 – 12,276,598	+	6	106	79.92	-1.48	0.62	0.551259
3700	2R_DroMel_CAF1	12,277,816 – 12,277,907	- - - - - - - - -	6013	12,277,816 – 12,277,907	-	6	98	71.41	-1.00	0.74	0.869841
3701	2R_DroMel_CAF1	12,281,111 – 12,281,203	- - - - - - - - -	6014	12,281,111 – 12,281,203	+	6	103	80.56	-1.87	0.67	0.808870
3702	2R_DroMel_CAF1	12,281,730 – 12,281,850	- - - "knownCDS=Parent=FBtr0087022;Name=CG5348-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5348-RA" - - - - -	6015	12,281,730 – 12,281,850	-	5	120	80.08	-1.73	0.60	0.530776
3703	2R_DroMel_CAF1	12,285,943 – 12,286,060	- - - - - - - - -	6016	12,285,943 – 12,286,040	-	5	102	81.01	-2.23	0.57	0.838682
3703	2R_DroMel_CAF1	12,285,943 – 12,286,060	- - - - - - - - -	6017	12,285,965 – 12,286,060	-	5	119	73.43	-1.73	0.49	0.616281
3704	2R_DroMel_CAF1	12,286,514 – 12,286,616	- - - - - - - - -	6018	12,286,514 – 12,286,616	+	6	119	79.37	-2.75	0.50	0.925738
3704	2R_DroMel_CAF1	12,286,514 – 12,286,616	- - - - - - - - -	6019	12,286,514 – 12,286,616	-	6	119	79.37	-2.88	0.63	0.971826
3705	2R_DroMel_CAF1	12,289,992 – 12,290,143	- - - "knownCDS=Parent=FBtr0087023;Name=Arp53D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5409-RA" - - - - -	6020	12,289,992 – 12,290,103	-	6	120	76.37	-2.01	0.53	0.860151
3705	2R_DroMel_CAF1	12,289,992 – 12,290,143		6021	12,290,023 – 12,290,143	-	6	120	71.50	-1.81	0.39	0.565397
3706	2R_DroMel_CAF1	12,299,804 – 12,299,916	- - - - - - - - -	6022	12,299,804 – 12,299,916	+	5	118	84.22	-1.94	0.73	0.793221
3707	2R_DroMel_CAF1	12,300,176 – 12,300,267	- - - - - - - - -	6023	12,300,176 – 12,300,267	+	5	94	75.61	-1.92	0.46	0.769031
3708	2R_DroMel_CAF1	12,304,637 – 12,304,757	- - - "knownCDS=Parent=FBtr0087026, FBtr0087027, FBtr0087028, FBtr0087029, FBtr0087030, FBtr0087031;Name=CG5522-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5522-RA, FlyBase+Annotation+IDs:CG5522-RD, FlyBase+Annotation+IDs:CG5522-RC, FlyBase+Annotation+IDs:CG5522-RE, FlyBase+Annotation+IDs:CG5522-RB, FlyBase+Annotation+IDs:CG5522-RF" - - - - -	6024	12,304,637 – 12,304,757	+	6	120	82.22	-1.44	0.71	0.558296
3709	2R_DroMel_CAF1	12,304,996 – 12,305,100	- - - "knownCDS=Parent=FBtr0087026, FBtr0087029, FBtr0087030;Name=CG5522-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5522-RA, FlyBase+Annotation+IDs:CG5522-RE, FlyBase+Annotation+IDs:CG5522-RB" - - - - -	6025	12,304,996 – 12,305,100	+	6	113	77.72	-0.87	0.79	0.590862
3709	2R_DroMel_CAF1	12,304,996 – 12,305,100		6026	12,304,996 – 12,305,100	-	6	113	77.72	-1.50	0.69	0.842350
3710	2R_DroMel_CAF1	12,306,537 – 12,306,631	- - - - - - - - -	6027	12,306,537 – 12,306,631	+	5	94	93.14	-1.38	0.87	0.807052
3711	2R_DroMel_CAF1	12,308,458 – 12,308,560	- - - "knownCDS=Parent=FBtr0087077;Name=CG15615-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15615-RA" - - - - -	6028	12,308,458 – 12,308,560	-	6	120	79.75	-1.67	0.65	0.741883
3712	2R_DroMel_CAF1	12,313,171 – 12,313,281	- - - - - - - - -	6029	12,313,171 – 12,313,281	+	6	114	80.71	-2.53	0.76	0.939635
3712	2R_DroMel_CAF1	12,313,171 – 12,313,281	- - - - - - - - -	6030	12,313,171 – 12,313,281	-	6	114	80.71	-1.32	0.82	0.677657
3713	2R_DroMel_CAF1	12,315,841 – 12,316,038	- - - - - - - - -	6031	12,315,841 – 12,315,941	+	6	120	79.22	-2.50	0.41	0.634018
				6032	12,315,880 – 12,315,971	-	6	120	76.92	-2.27	0.43	0.791705
				6033	12,315,941 – 12,316,038	+	6	120	75.89	-2.10	0.68	0.978184
3714	2R_DroMel_CAF1	12,316,750 – 12,316,856	- - - - - - - - -	6034	12,316,750 – 12,316,856	-	6	120	92.59	-1.88	0.94	0.993904
3715	2R_DroMel_CAF1	12,317,532 – 12,317,664	- - - - - - - - -	6035	12,317,532 – 12,317,641	-	6	119	93.23	-1.78	0.89	0.934834
3715	2R_DroMel_CAF1	12,317,532 – 12,317,664	- - - - - - - - -	6036	12,317,564 – 12,317,664	-	6	104	95.39	-1.69	0.92	0.984739
3716	2R_DroMel_CAF1	12,319,662 – 12,319,825	- - - - - - - - -	6037	12,319,662 – 12,319,762	+	6	120	80.31	-2.80	0.49	0.862956
3716	2R_DroMel_CAF1	12,319,662 – 12,319,825	- - - - - - - - -	6038	12,319,724 – 12,319,825	+	6	120	81.25	-2.14	0.63	0.783646
3717	2R_DroMel_CAF1	12,321,679 – 12,321,785	- - - - - - - - -	6039	12,321,679 – 12,321,785	-	6	120	90.73	-1.45	0.88	0.684343
3718	2R_DroMel_CAF1	12,323,974 – 12,324,179	- - - - - - - - -	6040	12,323,974 – 12,324,071	-	6	120	88.98	-1.47	0.86	0.535713
				6041	12,324,071 – 12,324,179	+	5	113	79.44	-1.79	0.56	0.542264
				6042	12,324,071 – 12,324,179	-	5	113	79.44	-2.05	0.53	0.761228
3719	2R_DroMel_CAF1	12,326,666 – 12,326,758	- - - - - - - - -	6043	12,326,666 – 12,326,758	+	6	120	75.38	-2.08	0.63	0.971723
3720	2R_DroMel_CAF1	12,327,273 – 12,327,408	- - - - - - - - -	6044	12,327,273 – 12,327,368	-	5	110	78.83	-2.20	0.71	0.969563
3720	2R_DroMel_CAF1	12,327,273 – 12,327,408	- - - - - - - - -	6045	12,327,297 – 12,327,408	-	6	120	79.40	-1.25	0.68	0.595226
3721	2R_DroMel_CAF1	12,327,462 – 12,327,553	- - - - - - - - -	6046	12,327,462 – 12,327,553	+	6	120	84.70	-1.50	0.87	0.620812
3721	2R_DroMel_CAF1	12,327,462 – 12,327,553	- - - - - - - - -	6047	12,327,462 – 12,327,553	-	6	120	84.70	-1.66	0.87	0.740987
3722	2R_DroMel_CAF1	12,328,944 – 12,329,064	- - - - - - - - -	6048	12,328,944 – 12,329,064	+	5	120	92.78	-2.04	0.82	0.961459
3723	2R_DroMel_CAF1	12,330,460 – 12,330,555	- - - - - - - - -	6049	12,330,460 – 12,330,555	+	6	120	73.94	-1.32	0.63	0.716532
3724	2R_DroMel_CAF1	12,331,424 – 12,331,540	- - - - - - - - -	6050	12,331,424 – 12,331,540	-	6	120	84.03	-1.93	0.71	0.552436
3725	2R_DroMel_CAF1	12,332,011 – 12,332,125	- - - - - - - - -	6051	12,332,011 – 12,332,125	+	6	120	75.06	-1.15	0.71	0.804480
3726	2R_DroMel_CAF1	12,333,953 – 12,334,055	- - - - - - - - -	6052	12,333,953 – 12,334,055	+	4	120	88.54	-2.61	0.89	0.991493
3726	2R_DroMel_CAF1	12,333,953 – 12,334,055	- - - - - - - - -	6053	12,333,953 – 12,334,055	-	4	120	88.54	-2.22	0.86	0.961036
3727	2R_DroMel_CAF1	12,334,134 – 12,334,233	- - - - - - - - -	6054	12,334,134 – 12,334,233	-	3	101	81.08	-1.47	0.79	0.622229
3728	2R_DroMel_CAF1	12,335,163 – 12,335,261	- - - - - - - - -	6055	12,335,163 – 12,335,261	+	5	120	78.80	-2.20	0.56	0.912402
3729	2R_DroMel_CAF1	12,335,588 – 12,335,815	- - - - - - - - -	6056	12,335,588 – 12,335,699	+	3	113	87.76	-1.88	0.79	0.542463
3729	2R_DroMel_CAF1	12,335,588 – 12,335,815	- - - - - - - - -	6057	12,335,699 – 12,335,815	-	4	120	88.42	-2.34	0.63	0.566784
3730	2R_DroMel_CAF1	12,336,383 – 12,336,482	- - - - - - - - -	6058	12,336,383 – 12,336,482	+	4	101	86.90	-1.44	0.86	0.605017
3731	2R_DroMel_CAF1	12,341,257 – 12,341,408	- - - "knownCDS=Parent=FBtr0087034;Name=CG6301-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6301-RA" - - - - -	6059	12,341,257 – 12,341,377	-	6	120	75.06	-1.85	0.50	0.734829
				6060	12,341,297 – 12,341,408	+	6	117	75.58	-1.89	0.57	0.899284
				6061	12,341,297 – 12,341,408	-	6	117	75.58	-1.90	0.63	0.948702
3732	2R_DroMel_CAF1	12,343,475 – 12,343,575	- - - - - - - - -	6062	12,343,475 – 12,343,575	-	5	120	77.68	-2.32	0.44	0.940534
3733	2R_DroMel_CAF1	12,346,274 – 12,346,408	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002261; Name=dme-mir-8" - "RNAmicro=f:12346298_t:12346417_strand:+_p:0.744268" - "Rfam=AC004641.1/125182-125108_RF00241;mir-8;\|2e-36" - "miRBase=dme-mir-8\|4e-45" - "Flybase=FBgn0046815:mir-8:microRNA_encoding_gene\|2e-07"	6063	12,346,274 – 12,346,369	+	6	105	83.03	-3.91	0.87	0.982309
				6064	12,346,274 – 12,346,369	-	6	105	83.03	-3.84	0.87	0.983613
				6065	12,346,298 – 12,346,408	+	6	120	81.32	-2.42	0.91	0.965383
				6066	12,346,298 – 12,346,408	-	6	120	81.32	-1.78	0.80	0.831385
3734	2R_DroMel_CAF1	12,347,433 – 12,347,531	- - - - - - - - -	6067	12,347,433 – 12,347,531	-	3	105	64.31	-0.82	0.74	0.822986
3735	2R_DroMel_CAF1	12,349,185 – 12,349,304	- - - - - - - - -	6068	12,349,185 – 12,349,304	+	5	120	86.84	-2.63	0.69	0.905424
3736	2R_DroMel_CAF1	12,349,863 – 12,349,955	- - - - - - - - -	6069	12,349,863 – 12,349,955	-	5	106	88.02	-1.42	0.96	0.828968
3737	2R_DroMel_CAF1	12,350,637 – 12,350,728	- - - - - - - - -	6070	12,350,637 – 12,350,728	+	5	101	87.79	-1.45	0.77	0.500000
3738	2R_DroMel_CAF1	12,352,225 – 12,352,327	- - - - - - - - -	6071	12,352,225 – 12,352,327	-	4	109	84.36	-2.58	0.56	0.683664
3739	2R_DroMel_CAF1	12,356,951 – 12,357,120	- - - - - - - - -	6072	12,356,951 – 12,357,065	+	5	119	93.09	-1.65	0.90	0.975473
3739	2R_DroMel_CAF1	12,356,951 – 12,357,120	- - - - - - - - -	6073	12,357,030 – 12,357,120	-	3	90	97.78	-2.81	0.96	0.974830
3740	2R_DroMel_CAF1	12,358,888 – 12,359,008	- - - "knownCDS=Parent=FBtr0087076;Name=Ugt37c1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8652-RA" - - - - -	6074	12,358,888 – 12,359,008	+	4	120	92.92	-1.85	0.89	0.881423
3741	2R_DroMel_CAF1	12,359,631 – 12,359,751	- - - "knownCDS=Parent=FBtr0087076;Name=Ugt37c1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8652-RA" - - - - -	6075	12,359,631 – 12,359,751	+	4	120	96.25	-1.72	0.96	0.812079
3742	2R_DroMel_CAF1	12,360,690 – 12,360,797	- - - - - - - - -	6076	12,360,690 – 12,360,797	-	6	117	78.59	-2.61	0.48	0.914637
3743	2R_DroMel_CAF1	12,361,038 – 12,361,135	- - - - - - - - -	6077	12,361,038 – 12,361,135	+	5	97	97.11	-1.55	0.96	0.973674
3743	2R_DroMel_CAF1	12,361,038 – 12,361,135	- - - - - - - - -	6078	12,361,038 – 12,361,135	-	5	97	97.11	-1.72	0.98	0.993297
3744	2R_DroMel_CAF1	12,361,166 – 12,361,257	- - - - - - - - -	6079	12,361,166 – 12,361,257	-	6	107	78.32	-1.88	0.56	0.732687
3745	2R_DroMel_CAF1	12,365,212 – 12,365,412	- - - - - - - - -	6080	12,365,212 – 12,365,332	+	5	120	79.48	-2.86	0.60	0.994214
				6081	12,365,212 – 12,365,332	-	5	120	79.48	-1.79	0.60	0.637621
				6082	12,365,292 – 12,365,412	+	5	120	92.22	-1.40	0.85	0.757124
3746	2R_DroMel_CAF1	12,365,574 – 12,365,691	- - - "knownCDS=Parent=FBtr0087036;Name=CG5859-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5859-RA" - - - - -	6083	12,365,574 – 12,365,691	-	6	120	78.48	-1.38	0.66	0.663511
3747	2R_DroMel_CAF1	12,367,552 – 12,367,672	- - - "knownCDS=Parent=FBtr0087036;Name=CG5859-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5859-RA" - - - - -	6084	12,367,552 – 12,367,672	-	6	120	80.78	-1.69	0.61	0.589453
3748	2R_DroMel_CAF1	12,368,733 – 12,368,824	- - - - - - - - -	6085	12,368,733 – 12,368,824	+	6	105	72.07	-0.65	0.78	0.740664
3749	2R_DroMel_CAF1	12,372,272 – 12,372,375	- - - - - - - - -	6086	12,372,272 – 12,372,375	+	6	113	73.72	-1.91	0.66	0.977258
3750	2R_DroMel_CAF1	12,374,360 – 12,374,456	- - - "knownCDS=Parent=FBtr0100440;Name=Dek-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5935-RD" - - - - -	6087	12,374,360 – 12,374,456	-	6	118	76.96	-1.73	0.53	0.592814
3751	2R_DroMel_CAF1	12,375,527 – 12,375,625	- - - - - - - - -	6088	12,375,527 – 12,375,625	+	6	107	84.35	-1.91	0.74	0.558880
3752	2R_DroMel_CAF1	12,379,073 – 12,379,186	- - - - - - - - -	6089	12,379,073 – 12,379,186	+	5	120	74.50	-3.61	0.38	0.999907
3752	2R_DroMel_CAF1	12,379,073 – 12,379,186	- - - - - - - - -	6090	12,379,073 – 12,379,186	-	5	120	74.50	-3.85	0.42	0.999937
3753	2R_DroMel_CAF1	12,387,271 – 12,387,383	- - - "knownCDS=Parent=FBtr0087043;Name=CG6421-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6421-RA" - - - - -	6091	12,387,271 – 12,387,383	+	6	112	81.06	-1.83	0.63	0.683313
3754	2R_DroMel_CAF1	12,390,305 – 12,390,407	- - - - - - - - -	6092	12,390,305 – 12,390,407	-	5	104	92.17	-1.30	0.84	0.577646
3755	2R_DroMel_CAF1	12,392,030 – 12,392,135	- - - "knownCDS=Parent=FBtr0087071;Name=CG8910-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8910-RA" - - - - -	6093	12,392,030 – 12,392,135	-	6	105	81.68	-1.75	0.68	0.691487
3756	2R_DroMel_CAF1	12,400,448 – 12,400,546	- - - - - - - - -	6094	12,400,448 – 12,400,546	+	6	98	85.24	-2.71	0.74	0.711007
3757	2R_DroMel_CAF1	12,401,447 – 12,401,537	- - - - - - - - -	6095	12,401,447 – 12,401,537	+	5	92	89.69	-2.19	0.71	0.722899
3758	2R_DroMel_CAF1	12,405,833 – 12,405,931	- - - - - - - - -	6096	12,405,833 – 12,405,931	+	4	106	83.50	-1.81	0.69	0.728519
3759	2R_DroMel_CAF1	12,406,168 – 12,406,275	- - - - - - - - -	6097	12,406,168 – 12,406,275	-	6	115	78.72	-1.33	0.67	0.643704
3760	2R_DroMel_CAF1	12,416,408 – 12,416,505	- - - - - - - - -	6098	12,416,408 – 12,416,505	-	5	116	62.58	-1.84	0.49	0.906801
3761	2R_DroMel_CAF1	12,418,181 – 12,418,277	- - - - - - - - -	6099	12,418,181 – 12,418,277	+	5	96	79.68	-2.17	0.41	0.710991
3762	2R_DroMel_CAF1	12,425,384 – 12,425,492	- - - - - - - - -	6100	12,425,384 – 12,425,492	-	3	112	64.33	-2.11	0.56	0.999192
3763	2R_DroMel_CAF1	12,434,176 – 12,434,292	- - - "knownCDS=texon1480;Parent=CG_RGUI_GID_mRNA_40003631, CG_DGIL_SNO_28356775" - - - - -	6101	12,434,176 – 12,434,292	+	3	119	70.57	-2.63	0.51	0.995139
3764	2R_DroMel_CAF1	12,441,919 – 12,442,014	- - - - - - - - -	6102	12,441,919 – 12,442,014	-	4	95	84.22	-1.78	0.65	0.622023
3765	2R_DroMel_CAF1	12,444,819 – 12,444,925	- - - - - - - - -	6103	12,444,819 – 12,444,925	-	6	113	82.22	-1.76	0.65	0.584036
3766	2R_DroMel_CAF1	12,448,439 – 12,448,539	- - - - - - - - -	6104	12,448,439 – 12,448,539	-	3	119	83.75	-2.44	0.75	0.908820
3767	2R_DroMel_CAF1	12,448,664 – 12,448,765	- - - - - - - - -	6105	12,448,664 – 12,448,765	-	6	120	75.84	-1.78	0.49	0.560423
3768	2R_DroMel_CAF1	12,451,530 – 12,451,626	- - - - - - - - -	6106	12,451,530 – 12,451,626	-	6	100	83.17	-2.53	0.59	0.579274
3769	2R_DroMel_CAF1	12,457,322 – 12,457,424	- - - "knownCDS=Parent=FBtr0087048, FBtr0087049;Name=Pkc53E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6622-RB, FlyBase+Annotation+IDs:CG6622-RA" - - - - -	6107	12,457,322 – 12,457,424	+	6	111	76.76	-1.27	0.68	0.743240
3770	2R_DroMel_CAF1	12,473,848 – 12,473,948	- - - - - - - - -	6108	12,473,848 – 12,473,948	+	4	103	78.71	-3.78	0.53	0.997745
3771	2R_DroMel_CAF1	12,477,685 – 12,477,790	- - - - - - - - -	6109	12,477,685 – 12,477,790	+	5	115	79.82	-2.27	0.43	0.802807
3772	2R_DroMel_CAF1	12,478,456 – 12,478,550	- - - - - - - - -	6110	12,478,456 – 12,478,550	-	5	94	83.57	-2.25	0.74	0.931024
3773	2R_DroMel_CAF1	12,482,497 – 12,482,595	- - - - - - - - -	6111	12,482,497 – 12,482,595	-	5	99	94.34	-1.43	0.89	0.876202
3774	2R_DroMel_CAF1	12,483,876 – 12,483,966	- - - - - - - - -	6112	12,483,876 – 12,483,966	+	6	99	80.08	-2.53	0.71	0.945128
3774	2R_DroMel_CAF1	12,483,876 – 12,483,966	- - - - - - - - -	6113	12,483,876 – 12,483,966	-	6	99	80.08	-2.13	0.61	0.834913
3775	2R_DroMel_CAF1	12,485,094 – 12,485,225	- - - - - - - - -	6114	12,485,094 – 12,485,205	+	4	112	88.51	-1.63	0.71	0.577871
				6115	12,485,128 – 12,485,225	+	4	98	89.76	-1.56	0.79	0.628048
				6116	12,485,128 – 12,485,225	-	4	98	89.76	-1.40	0.80	0.521387
3776	2R_DroMel_CAF1	12,486,553 – 12,486,658	- - - - - - - - -	6117	12,486,553 – 12,486,658	-	5	105	92.38	-1.19	0.89	0.600770
3777	2R_DroMel_CAF1	12,490,202 – 12,490,296	- - - - - - - - -	6118	12,490,202 – 12,490,296	+	4	95	91.04	-2.41	0.79	0.904910
3778	2R_DroMel_CAF1	12,495,275 – 12,495,422	- - - - - - - - -	6119	12,495,275 – 12,495,385	+	5	117	81.65	-2.88	0.65	0.987726
				6120	12,495,275 – 12,495,385	-	5	117	81.65	-2.37	0.74	0.967668
				6121	12,495,312 – 12,495,422	+	5	120	78.04	-1.85	0.63	0.808226
3779	2R_DroMel_CAF1	12,498,402 – 12,498,500	- - - - - - - - -	6122	12,498,402 – 12,498,500	+	5	103	72.45	-1.51	0.07	0.639593
3780	2R_DroMel_CAF1	12,505,020 – 12,505,115	- - - - - - - - -	6123	12,505,020 – 12,505,115	+	6	103	90.10	-1.49	0.91	0.847349
3781	2R_DroMel_CAF1	12,505,311 – 12,505,415	- - - - - - - - -	6124	12,505,311 – 12,505,415	-	6	105	84.54	-2.17	0.75	0.652846
3782	2R_DroMel_CAF1	12,510,108 – 12,510,206	- - - - - - - - -	6125	12,510,108 – 12,510,206	-	6	108	80.17	-2.45	0.48	0.688346
3783	2R_DroMel_CAF1	12,510,551 – 12,510,641	- - - - - - - - -	6126	12,510,551 – 12,510,641	-	5	90	92.67	-1.23	0.88	0.626016
3784	2R_DroMel_CAF1	12,513,962 – 12,514,076	- - - "knownCDS=Parent=FBtr0087060;Name=CG9001-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9001-RA" - - - - -	6127	12,513,962 – 12,514,076	-	6	114	77.54	-1.99	0.56	0.847387
3785	2R_DroMel_CAF1	12,514,373 – 12,514,482	- - "RNAmicro=f:12514373_t:12514481_strand:+_p:0.894064" "knownCDS=Parent=FBtr0087060;Name=CG9001-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9001-RA" - - - - -	6128	12,514,373 – 12,514,482	+	6	109	67.83	-1.88	0.37	0.775267
3785	2R_DroMel_CAF1	12,514,373 – 12,514,482		6129	12,514,373 – 12,514,482	-	6	109	67.83	-1.75	0.58	0.950126
3786	2R_DroMel_CAF1	12,516,873 – 12,516,976	- - - "knownCDS=Parent=FBtr0087057;Name=CG6796-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6796-RA" - - - - -	6130	12,516,873 – 12,516,976	-	5	103	96.12	-1.63	0.83	0.767528
3787	2R_DroMel_CAF1	12,518,319 – 12,518,431	- - - "knownCDS=Parent=FBtr0087057;Name=CG6796-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6796-RA" - - - - -	6131	12,518,319 – 12,518,431	+	6	114	78.22	-1.68	0.55	0.554989
3787	2R_DroMel_CAF1	12,518,319 – 12,518,431		6132	12,518,319 – 12,518,431	-	6	114	78.22	-1.96	0.81	0.952771
3788	2R_DroMel_CAF1	12,520,759 – 12,520,879	- - - "knownCDS=Parent=FBtr0086966;Name=CG6805-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6805-RA" - - - - -	6133	12,520,759 – 12,520,879	+	6	120	79.66	-2.04	0.57	0.757667
3789	2R_DroMel_CAF1	12,524,370 – 12,524,475	- - - - - - - - -	6134	12,524,370 – 12,524,475	-	6	105	79.73	-1.43	0.69	0.699134
3790	2R_DroMel_CAF1	12,525,785 – 12,525,886	- - - - - - - - -	6135	12,525,785 – 12,525,886	+	6	114	78.28	-1.87	0.59	0.820761
3791	2R_DroMel_CAF1	12,527,130 – 12,527,241	- - - "knownCDS=Parent=FBtr0087018, FBtr0087019, FBtr0087020;Name=CG15609-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15609-RA, FlyBase+Annotation+IDs:CG15609-RB, FlyBase+Annotation+IDs:CG15609-RC" - - - - -	6136	12,527,130 – 12,527,241	+	6	111	75.32	-1.13	0.66	0.615611
3792	2R_DroMel_CAF1	12,527,937 – 12,528,056	- - - - - - - - -	6137	12,527,937 – 12,528,056	-	5	119	92.44	-2.30	0.88	0.998447
3793	2R_DroMel_CAF1	12,529,079 – 12,529,187	- - - - - - - - -	6138	12,529,079 – 12,529,187	-	5	115	75.50	-1.75	0.14	0.830056
3794	2R_DroMel_CAF1	12,530,636 – 12,530,737	- - - - - - - - -	6139	12,530,636 – 12,530,737	-	5	101	97.21	-2.04	1.01	0.999322
3795	2R_DroMel_CAF1	12,531,829 – 12,531,924	- - - "knownCDS=Parent=FBtr0087016, FBtr0087017;Name=CG8963-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8963-RA, FlyBase+Annotation+IDs:CG8963-RB" - - - - -	6140	12,531,829 – 12,531,924	+	6	108	82.28	-1.76	0.64	0.542517
3796	2R_DroMel_CAF1	12,541,234 – 12,541,324	- - - - - - - - -	6141	12,541,234 – 12,541,324	-	6	93	75.89	-2.25	0.54	0.957375
3797	2R_DroMel_CAF1	12,542,472 – 12,542,587	- - - - - - - - -	6142	12,542,472 – 12,542,587	+	5	115	94.17	-1.77	0.87	0.976283
3798	2R_DroMel_CAF1	12,544,461 – 12,544,612	- - - - - - - - -	6143	12,544,461 – 12,544,579	+	5	118	96.44	-1.56	0.90	0.928836
3798	2R_DroMel_CAF1	12,544,461 – 12,544,612	- - - - - - - - -	6144	12,544,501 – 12,544,612	-	5	111	96.94	-1.57	0.92	0.946784
3799	2R_DroMel_CAF1	12,544,855 – 12,544,946	- - - - - - - - -	6145	12,544,855 – 12,544,946	+	5	94	89.46	-1.50	0.79	0.623228
3800	2R_DroMel_CAF1	12,545,408 – 12,545,521	- - - - - - - - -	6146	12,545,408 – 12,545,521	-	5	113	96.11	-1.86	0.89	0.982965
3801	2R_DroMel_CAF1	12,545,630 – 12,545,746	- - - - - - - - -	6147	12,545,630 – 12,545,746	+	5	120	89.70	-2.04	0.83	0.970290
3802	2R_DroMel_CAF1	12,548,051 – 12,548,164	- - - "knownCDS=Parent=FBtr0087015;Name=CG30459-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30459-RA" - - - - -	6148	12,548,051 – 12,548,164	-	6	114	73.29	-1.40	0.56	0.525919
3803	2R_DroMel_CAF1	12,548,766 – 12,548,881	- - - - - - - - -	6149	12,548,766 – 12,548,881	-	3	116	96.55	-1.62	1.00	0.756292
3804	2R_DroMel_CAF1	12,549,295 – 12,549,394	- - - - - - - - -	6150	12,549,295 – 12,549,394	-	6	109	81.29	-2.48	0.47	0.500000
3805	2R_DroMel_CAF1	12,552,936 – 12,553,036	- - - "knownCDS=Parent=FBtr0086969, FBtr0086971;Name=RhoGEF2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9635-RE, FlyBase+Annotation+IDs:CG9635-RD" - - - - -	6151	12,552,936 – 12,553,036	+	6	102	78.44	-1.59	0.67	0.818040
3806	2R_DroMel_CAF1	12,554,914 – 12,555,034	- - - - - - - - -	6152	12,554,914 – 12,555,034	+	5	120	91.67	-2.20	0.85	0.993156
3807	2R_DroMel_CAF1	12,557,051 – 12,557,199	- - - "knownCDS=Parent=FBtr0086970;Name=RhoGEF2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9635-RF" - - - - -	6153	12,557,051 – 12,557,171	-	6	120	71.40	-1.76	0.50	0.826384
3807	2R_DroMel_CAF1	12,557,051 – 12,557,199		6154	12,557,091 – 12,557,199	-	6	108	82.84	-1.85	0.65	0.549719
3808	2R_DroMel_CAF1	12,563,033 – 12,563,148	- - - "knownCDS=Parent=FBtr0086973;Name=CG9642-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9642-RA" - - - - -	6155	12,563,033 – 12,563,148	-	6	120	75.65	-2.23	0.48	0.917171
3809	2R_DroMel_CAF1	12,567,031 – 12,567,136	- - - "knownCDS=Parent=FBtr0086974;Name=CG9646-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9646-RA" - - - - -	6156	12,567,031 – 12,567,136	-	6	111	76.45	-1.66	0.56	0.670642
3810	2R_DroMel_CAF1	12,569,070 – 12,569,162	- - - "knownCDS=Parent=FBtr0086975;Name=fat-spondin-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6953-RA" - - - - -	6157	12,569,070 – 12,569,162	+	6	108	79.12	-1.37	0.65	0.608922
3811	2R_DroMel_CAF1	12,578,885 – 12,578,997	- - - - - - - - -	6158	12,578,885 – 12,578,997	-	3	113	86.38	-1.82	0.85	0.705961
3812	2R_DroMel_CAF1	12,581,644 – 12,581,753	- - - "knownCDS=Parent=FBtr0087011;Name=CG30460-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30460-RA" - - - - -	6159	12,581,644 – 12,581,753	-	6	120	75.68	-1.43	0.61	0.670296
3813	2R_DroMel_CAF1	12,583,335 – 12,583,443	- - - "knownCDS=Parent=FBtr0087010;Name=CG30460-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30460-RC" - - - - -	6160	12,583,335 – 12,583,443	+	6	117	78.20	-2.03	0.52	0.743579
3814	2R_DroMel_CAF1	12,584,494 – 12,584,608	- - "RNAmicro=f:12584494_t:12584613_strand:-_p:0.779394" "knownCDS=Parent=FBtr0087010;Name=CG30460-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30460-RC" - - - - -	6161	12,584,494 – 12,584,608	+	6	120	81.11	-2.71	0.69	0.924971
3814	2R_DroMel_CAF1	12,584,494 – 12,584,608		6162	12,584,494 – 12,584,608	-	6	120	81.11	-3.43	0.72	0.957837
3815	2R_DroMel_CAF1	12,591,526 – 12,591,626	- - "RNAmicro=f:12591526_t:12591631_strand:+_p:0.711865" - - - - - -	6163	12,591,526 – 12,591,626	+	6	106	75.46	-2.64	0.55	0.991356
3815	2R_DroMel_CAF1	12,591,526 – 12,591,626		6164	12,591,526 – 12,591,626	-	6	106	75.46	-2.70	0.52	0.991630
3816	2R_DroMel_CAF1	12,593,703 – 12,593,793	- - - - - - - - -	6165	12,593,703 – 12,593,793	-	6	103	90.11	-1.94	0.82	0.620317
3817	2R_DroMel_CAF1	12,595,542 – 12,595,656	- - - - - - - - -	6166	12,595,542 – 12,595,656	-	6	120	83.57	-1.69	0.70	0.508997
3818	2R_DroMel_CAF1	12,597,823 – 12,597,914	- - - - - - - - -	6167	12,597,823 – 12,597,914	+	6	107	75.07	-1.37	0.58	0.515879
3819	2R_DroMel_CAF1	12,599,522 – 12,599,629	- - - - - - - - -	6168	12,599,522 – 12,599,629	-	5	108	93.98	-1.26	0.85	0.575047
3820	2R_DroMel_CAF1	12,601,000 – 12,601,098	- - - - - - - - -	6169	12,601,000 – 12,601,098	-	6	110	81.52	-1.86	0.70	0.763403
3821	2R_DroMel_CAF1	12,607,701 – 12,607,805	- - - "knownCDS=Parent=FBtr0086979;Name=CG6984-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6984-RA" - - - - -	6170	12,607,701 – 12,607,805	+	6	109	82.52	-1.97	0.64	0.597831
3821	2R_DroMel_CAF1	12,607,701 – 12,607,805		6171	12,607,701 – 12,607,805	-	6	109	82.52	-2.87	0.81	0.939936
3822	2R_DroMel_CAF1	12,610,989 – 12,611,081	- - - - - - - - -	6172	12,610,989 – 12,611,081	-	6	109	76.95	-2.01	0.56	0.890191
3823	2R_DroMel_CAF1	12,613,867 – 12,613,977	- - - - - - - - -	6173	12,613,867 – 12,613,977	+	6	119	79.39	-2.47	0.53	0.879897
3823	2R_DroMel_CAF1	12,613,867 – 12,613,977	- - - - - - - - -	6174	12,613,867 – 12,613,977	-	6	119	79.39	-1.80	0.56	0.575418
3824	2R_DroMel_CAF1	12,628,368 – 12,628,468	- - - - - - - - -	6175	12,628,368 – 12,628,468	-	6	105	79.96	-1.11	0.70	0.506746
3825	2R_DroMel_CAF1	12,634,988 – 12,635,108	- - - "knownCDS=Parent=FBtr0087004;Name=Amy-p-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18730-RA" - - - - -	6176	12,634,988 – 12,635,108	-	5	120	96.25	-1.02	0.99	0.544064
3826	2R_DroMel_CAF1	12,635,926 – 12,636,039	- - - - - - - - -	6177	12,635,926 – 12,636,039	+	3	113	98.82	-1.59	1.00	0.733345
3827	2R_DroMel_CAF1	12,637,207 – 12,637,367	- - - - - - - - -	6178	12,637,207 – 12,637,327	+	3	120	98.89	-2.83	0.94	0.962815
				6179	12,637,207 – 12,637,327	-	3	120	98.89	-3.35	0.94	0.973483
				6180	12,637,247 – 12,637,367	-	3	120	100.00	-1.55	1.00	0.699132
3828	2R_DroMel_CAF1	12,639,291 – 12,639,392	- - - - - - - - -	6181	12,639,291 – 12,639,392	+	3	120	84.44	-1.81	0.78	0.632453
3829	2R_DroMel_CAF1	12,640,588 – 12,640,708	- - - "knownCDS=Parent=FBtr0086983;Name=Amy-d-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17876-RA" - - - - -	6182	12,640,588 – 12,640,708	-	3	120	98.89	-1.41	1.00	0.583362
3830	2R_DroMel_CAF1	12,648,822 – 12,648,916	- - - - - - - - -	6183	12,648,822 – 12,648,916	-	6	110	79.73	-2.32	0.58	0.886261
3831	2R_DroMel_CAF1	12,650,196 – 12,650,314	- - - - - - - - -	6184	12,650,196 – 12,650,314	+	3	120	90.50	-2.09	0.85	0.713412
3832	2R_DroMel_CAF1	12,652,439 – 12,652,545	- - - "knownCDS=Parent=FBtr0086987;Name=CG11395-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11395-RA" - - - - -	6185	12,652,439 – 12,652,545	-	6	116	73.90	-1.38	0.60	0.647093
3833	2R_DroMel_CAF1	12,653,018 – 12,653,114	- - - "knownCDS=Parent=FBtr0086987;Name=CG11395-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11395-RA" - - - - -	6186	12,653,018 – 12,653,114	-	6	120	78.53	-1.91	0.60	0.846445
3834	2R_DroMel_CAF1	12,654,794 – 12,654,974	- - - - - - - - -	6187	12,654,794 – 12,654,900	+	5	106	92.73	-2.03	0.88	0.994876
				6188	12,654,834 – 12,654,934	+	5	100	89.80	-2.10	0.90	0.996195
				6189	12,654,860 – 12,654,974	+	5	114	88.77	-1.88	0.82	0.916586
3835	2R_DroMel_CAF1	12,656,857 – 12,656,961	- - - - - - - - -	6190	12,656,857 – 12,656,961	+	6	111	80.30	-1.80	0.71	0.838767
3836	2R_DroMel_CAF1	12,658,400 – 12,658,622	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002425; Name=snoRNA:U3:54Aa;Dbxref=FB:FBgn0065048,GB:NR_002544" - - - - "Noncode=n3496,u3125,AJ543994,U3,Drosophila_melanogaster_(fruit_fly)\|2e-85" - - "Flybase=FBgn0065047:snoRNA:U3:54Ab:nuclear_small_nucleolar_RNA_gene\|2e-86"	6191	12,658,400 – 12,658,507	-	6	120	79.24	-1.58	0.69	0.805078
				6192	12,658,507 – 12,658,622	+	6	120	81.14	-2.04	0.75	0.868494
				6193	12,658,507 – 12,658,622	-	6	120	81.14	-1.46	0.67	0.580850
3837	2R_DroMel_CAF1	12,658,794 – 12,658,922	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000094; Name=Dmel_Leu_AAG_14000094;TFAMID=DmelLAAG-12658909" "tRNAscan=type:Leu:anticodon:AAG f:12658827_t:12658941_strand=-_cove=71.48" - - "Rfam=AE003812.3/86565-86484_RF00005;tRNA;\|1e-40" - - - "Flybase=FBgn0050229:CR30229:cytosolic_tRNA_gene\|1e-42"	6194	12,658,794 – 12,658,885	+	6	106	80.95	-1.96	0.94	0.939330
				6195	12,658,794 – 12,658,885	-	6	106	80.95	-1.14	0.94	0.554646
				6196	12,658,818 – 12,658,922	+	6	120	84.50	-1.23	0.98	0.661775
				6197	12,658,818 – 12,658,922	-	6	120	84.50	-1.60	0.95	0.875272
3838	2R_DroMel_CAF1	12,660,137 – 12,660,267	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000095; Name=Dmel_Leu_AAG_14000095;TFAMID=DmelLAAG-12660163" "tRNAscan=type:Leu:anticodon:AAG f:12660162_t:12660268_strand=+_cove=71.48" - - "Rfam=AE003812.3/86565-86484_RF00005;tRNA;\|1e-40" - - - "Flybase=FBgn0050229:CR30229:cytosolic_tRNA_gene\|1e-42"	6198	12,660,137 – 12,660,249	+	6	120	84.12	-1.31	0.89	0.527287
3838	2R_DroMel_CAF1	12,660,137 – 12,660,267		6199	12,660,175 – 12,660,267	-	6	115	81.11	-1.59	0.96	0.868069
3839	2R_DroMel_CAF1	12,660,538 – 12,660,685	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002426; Name=snoRNA:U3:54Ab;Dbxref=FB:FBgn0065047,GB:NR_002545" - - - - "Noncode=n3496,u3125,AJ543994,U3,Drosophila_melanogaster_(fruit_fly)\|3e-80" - - "Flybase=FBgn0065047:snoRNA:U3:54Ab:nuclear_small_nucleolar_RNA_gene\|3e-81"	6200	12,660,538 – 12,660,645	+	6	120	78.47	-1.97	0.75	0.945174
3839	2R_DroMel_CAF1	12,660,538 – 12,660,685		6201	12,660,578 – 12,660,685	+	6	120	79.39	-1.53	0.70	0.792266
3840	2R_DroMel_CAF1	12,687,614 – 12,687,713	- - - - - - - - -	6202	12,687,614 – 12,687,713	-	6	108	84.18	-2.05	0.75	0.642144
3841	2R_DroMel_CAF1	12,687,823 – 12,687,915	- - - - - - - - -	6203	12,687,823 – 12,687,915	+	5	94	96.66	-1.67	0.94	0.984539
3841	2R_DroMel_CAF1	12,687,823 – 12,687,915	- - - - - - - - -	6204	12,687,823 – 12,687,915	-	5	94	96.66	-1.45	0.94	0.940070
3842	2R_DroMel_CAF1	12,688,113 – 12,688,210	- - - - - - - - -	6205	12,688,113 – 12,688,210	+	6	120	83.25	-1.87	0.79	0.740514
3842	2R_DroMel_CAF1	12,688,113 – 12,688,210	- - - - - - - - -	6206	12,688,113 – 12,688,210	-	6	120	83.25	-1.82	0.70	0.584577
3843	2R_DroMel_CAF1	12,689,093 – 12,689,226	- - - - - - - - -	6207	12,689,093 – 12,689,192	+	6	107	80.57	-2.34	0.54	0.752308
				6208	12,689,093 – 12,689,192	-	6	107	80.57	-2.51	0.60	0.888769
				6209	12,689,124 – 12,689,226	+	6	107	86.76	-1.93	0.92	0.951031
				6210	12,689,124 – 12,689,226	-	6	107	86.76	-1.40	0.90	0.629293
3844	2R_DroMel_CAF1	12,697,651 – 12,697,752	- - - - - - - - -	6211	12,697,651 – 12,697,752	-	6	116	76.46	-1.37	0.63	0.676468
3845	2R_DroMel_CAF1	12,706,889 – 12,706,983	- - - - - - - - -	6212	12,706,889 – 12,706,983	+	6	100	70.04	-1.72	0.43	0.655977
3845	2R_DroMel_CAF1	12,706,889 – 12,706,983	- - - - - - - - -	6213	12,706,889 – 12,706,983	-	6	100	70.04	-2.09	0.25	0.540873
3846	2R_DroMel_CAF1	12,710,992 – 12,711,112	- - - "knownCDS=Parent=FBtr0086990;Name=CG10950-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10950-RA" - - - - -	6214	12,710,992 – 12,711,112	+	5	120	86.00	-1.96	0.84	0.926639
3846	2R_DroMel_CAF1	12,710,992 – 12,711,112		6215	12,710,992 – 12,711,112	-	5	120	86.00	-1.64	0.75	0.616951
3847	2R_DroMel_CAF1	12,714,763 – 12,714,853	- - - - - - - - -	6216	12,714,763 – 12,714,853	+	6	105	83.77	-2.41	0.64	0.564798
3847	2R_DroMel_CAF1	12,714,763 – 12,714,853	- - - - - - - - -	6217	12,714,763 – 12,714,853	-	6	105	83.77	-1.80	0.73	0.564711
3848	2R_DroMel_CAF1	12,716,368 – 12,716,459	- - - - - - - - -	6218	12,716,368 – 12,716,459	+	6	120	77.37	-2.89	0.47	0.981459
3849	2R_DroMel_CAF1	12,716,712 – 12,716,802	- - - - - - - - -	6219	12,716,712 – 12,716,802	+	6	93	93.92	-0.76	0.97	0.536592
3849	2R_DroMel_CAF1	12,716,712 – 12,716,802	- - - - - - - - -	6220	12,716,712 – 12,716,802	-	6	93	93.92	-1.84	0.88	0.918730
3850	2R_DroMel_CAF1	12,723,329 – 12,723,439	- - - - - - - - -	6221	12,723,329 – 12,723,439	+	5	110	95.73	-3.57	0.88	0.999766
3850	2R_DroMel_CAF1	12,723,329 – 12,723,439	- - - - - - - - -	6222	12,723,329 – 12,723,439	-	5	110	95.73	-2.93	0.88	0.999594
3851	2R_DroMel_CAF1	12,723,839 – 12,723,977	- - - - - - - - -	6223	12,723,839 – 12,723,940	-	6	107	83.67	-2.31	0.72	0.717855
3851	2R_DroMel_CAF1	12,723,839 – 12,723,977	- - - - - - - - -	6224	12,723,875 – 12,723,977	-	6	110	81.39	-2.30	0.68	0.855750
3852	2R_DroMel_CAF1	12,738,975 – 12,739,102	- - - - - - - - -	6225	12,738,975 – 12,739,067	+	6	106	81.68	-2.35	0.64	0.804947
3852	2R_DroMel_CAF1	12,738,975 – 12,739,102	- - - - - - - - -	6226	12,739,011 – 12,739,102	-	6	97	80.77	-1.97	0.67	0.818702
3853	2R_DroMel_CAF1	12,739,134 – 12,739,234	- - - - - - - - -	6227	12,739,134 – 12,739,234	+	5	110	85.38	-3.29	0.87	0.999475
3853	2R_DroMel_CAF1	12,739,134 – 12,739,234	- - - - - - - - -	6228	12,739,134 – 12,739,234	-	5	110	85.38	-1.62	0.77	0.627440
3854	2R_DroMel_CAF1	12,741,295 – 12,741,392	- - - - - - - - -	6229	12,741,295 – 12,741,392	-	6	120	76.76	-1.63	0.54	0.510257
3855	2R_DroMel_CAF1	12,741,699 – 12,741,798	- - - - - - - - -	6230	12,741,699 – 12,741,798	+	6	120	78.99	-1.62	0.68	0.817140
3856	2R_DroMel_CAF1	12,745,570 – 12,745,700	- - - - - - - - -	6231	12,745,570 – 12,745,660	+	6	96	80.95	-1.86	0.64	0.728194
				6232	12,745,570 – 12,745,660	-	6	96	80.95	-1.89	0.75	0.846312
				6233	12,745,590 – 12,745,700	+	5	110	90.82	-1.47	0.82	0.689759
				6234	12,745,590 – 12,745,700	-	5	110	90.82	-2.36	0.73	0.846071
3857	2R_DroMel_CAF1	12,748,308 – 12,748,409	- - - - - - - - -	6235	12,748,308 – 12,748,409	+	5	104	86.79	-3.24	0.65	0.931313
3858	2R_DroMel_CAF1	12,758,377 – 12,758,473	- - - - - - - - -	6236	12,758,377 – 12,758,473	+	5	98	93.83	-2.04	0.91	0.998201
3858	2R_DroMel_CAF1	12,758,377 – 12,758,473	- - - - - - - - -	6237	12,758,377 – 12,758,473	-	5	98	93.83	-1.12	0.92	0.580620
3859	2R_DroMel_CAF1	12,763,752 – 12,763,842	- - - - - - - - -	6238	12,763,752 – 12,763,842	+	6	120	77.54	-1.54	0.74	0.902982
3860	2R_DroMel_CAF1	12,764,474 – 12,764,581	- - - - - - - - -	6239	12,764,474 – 12,764,581	+	6	110	86.48	-2.06	0.84	0.792467
3861	2R_DroMel_CAF1	12,765,046 – 12,765,141	- - - - - - - - -	6240	12,765,046 – 12,765,141	+	6	114	80.39	-1.33	0.65	0.500000
3862	2R_DroMel_CAF1	12,769,214 – 12,769,309	- - - - - - - - -	6241	12,769,214 – 12,769,309	+	6	104	77.25	-1.69	0.72	0.932663
3862	2R_DroMel_CAF1	12,769,214 – 12,769,309	- - - - - - - - -	6242	12,769,214 – 12,769,309	-	6	104	77.25	-2.33	0.70	0.978904
3863	2R_DroMel_CAF1	12,774,485 – 12,774,583	- - - - - - - - -	6243	12,774,485 – 12,774,583	+	6	101	97.37	-1.03	0.95	0.814425
3864	2R_DroMel_CAF1	12,782,100 – 12,782,193	- - - - - - - - -	6244	12,782,100 – 12,782,193	+	6	99	80.34	-1.21	0.72	0.587605
3865	2R_DroMel_CAF1	12,784,908 – 12,785,013	- - - - - - - - -	6245	12,784,908 – 12,785,013	-	5	111	81.65	-1.89	0.56	0.528607
3866	2R_DroMel_CAF1	12,785,937 – 12,786,039	- - - - - - - - -	6246	12,785,937 – 12,786,039	+	6	106	90.00	-2.29	0.81	0.683627
3866	2R_DroMel_CAF1	12,785,937 – 12,786,039	- - - - - - - - -	6247	12,785,937 – 12,786,039	-	6	106	90.00	-3.22	0.85	0.990833
3867	2R_DroMel_CAF1	12,791,457 – 12,791,549	- - - - - - - - -	6248	12,791,457 – 12,791,549	-	5	108	78.13	-1.76	0.63	0.731937
3868	2R_DroMel_CAF1	12,793,140 – 12,793,257	- - - - - - - - -	6249	12,793,140 – 12,793,257	-	5	120	96.11	-1.48	0.88	0.846028
3869	2R_DroMel_CAF1	12,798,302 – 12,798,411	- - - - - - - - -	6250	12,798,302 – 12,798,411	-	6	114	80.36	-1.19	0.75	0.600421
3870	2R_DroMel_CAF1	12,798,961 – 12,799,052	- - - - - - - - -	6251	12,798,961 – 12,799,052	+	6	109	76.76	-1.09	0.87	0.830645
3871	2R_DroMel_CAF1	12,804,566 – 12,804,662	- - - - - - - - -	6252	12,804,566 – 12,804,662	-	6	99	84.40	-1.88	0.84	0.769279
3872	2R_DroMel_CAF1	12,816,774 – 12,816,883	- - - - - - - - -	6253	12,816,774 – 12,816,883	-	6	114	79.38	-1.20	0.78	0.697911
3873	2R_DroMel_CAF1	12,817,667 – 12,817,764	- - - - - - - - -	6254	12,817,667 – 12,817,764	+	5	108	81.63	-2.16	0.71	0.919166
3873	2R_DroMel_CAF1	12,817,667 – 12,817,764	- - - - - - - - -	6255	12,817,667 – 12,817,764	-	5	108	81.63	-2.56	0.69	0.975268
3874	2R_DroMel_CAF1	12,823,316 – 12,823,452	- - - - - - - - -	6256	12,823,316 – 12,823,427	+	5	116	81.27	-1.97	0.71	0.865445
				6257	12,823,316 – 12,823,427	-	5	116	81.27	-1.70	0.73	0.709404
				6258	12,823,352 – 12,823,452	+	5	101	92.62	-1.46	0.88	0.892713
				6259	12,823,352 – 12,823,452	-	5	101	92.62	-1.97	0.82	0.961841
3875	2R_DroMel_CAF1	12,835,162 – 12,835,267	- - - - - - - - -	6260	12,835,162 – 12,835,267	+	3	105	80.77	-2.16	0.76	0.940176
3876	2R_DroMel_CAF1	12,837,282 – 12,837,382	- - - - - - - - -	6261	12,837,282 – 12,837,382	-	3	101	80.46	-1.58	0.74	0.655793
3877	2R_DroMel_CAF1	12,842,463 – 12,842,556	- - - - - - - - -	6262	12,842,463 – 12,842,556	-	5	96	91.93	-1.72	0.81	0.865314
3878	2R_DroMel_CAF1	12,843,077 – 12,843,183	- - - - - - - - -	6263	12,843,077 – 12,843,183	-	5	106	97.08	-1.31	0.94	0.823522
3879	2R_DroMel_CAF1	12,848,523 – 12,848,617	- - - - - - - - -	6264	12,848,523 – 12,848,617	-	5	94	95.74	-1.13	0.95	0.694357
3880	2R_DroMel_CAF1	12,849,538 – 12,849,637	- - - - - - - - -	6265	12,849,538 – 12,849,637	-	3	100	79.45	-1.71	0.77	0.847293
3881	2R_DroMel_CAF1	12,852,335 – 12,852,473	- - - - - - - - -	6266	12,852,335 – 12,852,437	+	5	103	94.73	-2.78	0.92	0.999902
				6267	12,852,335 – 12,852,437	-	5	103	94.73	-1.15	0.96	0.778225
				6268	12,852,374 – 12,852,473	+	5	99	94.95	-2.05	0.79	0.873773
3882	2R_DroMel_CAF1	12,853,890 – 12,853,980	- - - - - - - - -	6269	12,853,890 – 12,853,980	-	3	100	92.00	-2.67	0.99	0.993293
3883	2R_DroMel_CAF1	12,858,280 – 12,858,385	- - - - - - - - -	6270	12,858,280 – 12,858,385	+	5	120	83.24	-1.61	0.84	0.679832
3884	2R_DroMel_CAF1	12,859,422 – 12,859,544	- - - - - - - - -	6271	12,859,422 – 12,859,514	+	6	120	77.01	-2.08	0.47	0.720974
				6272	12,859,422 – 12,859,514	-	6	120	77.01	-2.41	0.49	0.938188
				6273	12,859,435 – 12,859,544	-	6	120	82.30	-1.58	0.65	0.500000
3885	2R_DroMel_CAF1	12,860,128 – 12,860,227	- - - - - - - - -	6274	12,860,128 – 12,860,227	-	5	120	68.90	-2.40	0.55	0.996564
3886	2R_DroMel_CAF1	12,861,028 – 12,861,119	- - - - - - - - -	6275	12,861,028 – 12,861,119	-	5	101	83.47	-2.62	0.49	0.672539
3887	2R_DroMel_CAF1	12,862,320 – 12,862,423	- - - - - - - - -	6276	12,862,320 – 12,862,423	+	6	120	81.70	-1.99	0.61	0.626771
3888	2R_DroMel_CAF1	12,862,461 – 12,862,571	- - - - - - - - -	6277	12,862,461 – 12,862,571	+	3	118	94.24	-2.12	0.90	0.803002
3888	2R_DroMel_CAF1	12,862,461 – 12,862,571	- - - - - - - - -	6278	12,862,461 – 12,862,571	-	3	118	94.24	-1.96	0.84	0.507635
3889	2R_DroMel_CAF1	12,862,662 – 12,862,763	- - - - - - - - -	6279	12,862,662 – 12,862,763	+	4	120	80.64	-2.76	0.64	0.989797
3889	2R_DroMel_CAF1	12,862,662 – 12,862,763	- - - - - - - - -	6280	12,862,662 – 12,862,763	-	4	120	80.64	-1.86	0.64	0.720249
3890	2R_DroMel_CAF1	12,862,880 – 12,863,019	- - - - - - - - -	6281	12,862,880 – 12,862,984	+	4	105	99.04	-2.23	0.95	0.824479
				6282	12,862,905 – 12,863,019	+	3	120	89.42	-1.67	0.89	0.617842
				6283	12,862,905 – 12,863,019	-	3	120	89.42	-3.19	0.91	0.984593
3891	2R_DroMel_CAF1	12,863,343 – 12,863,452	- - - - - - - - -	6284	12,863,343 – 12,863,452	+	5	120	77.25	-3.01	0.55	0.998729
3892	2R_DroMel_CAF1	12,863,489 – 12,863,589	- - - - - - - - -	6285	12,863,489 – 12,863,589	+	4	107	83.11	-2.26	0.91	0.982313
3893	2R_DroMel_CAF1	12,864,151 – 12,864,289	- - - - - - - - -	6286	12,864,151 – 12,864,262	+	5	120	83.42	-2.01	0.57	0.531691
3893	2R_DroMel_CAF1	12,864,151 – 12,864,289	- - - - - - - - -	6287	12,864,191 – 12,864,289	-	5	120	77.15	-1.79	0.48	0.500000
3894	2R_DroMel_CAF1	12,864,354 – 12,864,552	- - - - - - - - -	6288	12,864,354 – 12,864,473	-	4	120	89.36	-1.73	0.78	0.720995
3894	2R_DroMel_CAF1	12,864,354 – 12,864,552	- - - - - - - - -	6289	12,864,433 – 12,864,552	-	4	120	97.77	-1.65	0.92	0.526928
3895	2R_DroMel_CAF1	12,864,789 – 12,864,895	- - - - - - - - -	6290	12,864,789 – 12,864,895	+	4	106	95.40	-1.80	0.93	0.852642
3896	2R_DroMel_CAF1	12,865,613 – 12,865,733	- - - - - - - - -	6291	12,865,613 – 12,865,733	+	4	120	96.39	-1.88	0.84	0.583787
3897	2R_DroMel_CAF1	12,865,938 – 12,866,097	- - - "knownCDS=Parent=FBtr0086991, FBtr0086992, FBtr0086994;Name=mbl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33197-RA, FlyBase+Annotation+IDs:CG33197-RB, FlyBase+Annotation+IDs:CG33197-RD" - - - - -	6292	12,865,938 – 12,866,057	-	5	120	91.79	-1.24	0.91	0.707664
3897	2R_DroMel_CAF1	12,865,938 – 12,866,097		6293	12,865,977 – 12,866,097	-	5	120	94.42	-1.24	0.92	0.778227
3898	2R_DroMel_CAF1	12,866,986 – 12,867,093	- - - "knownCDS=Parent=FBtr0086992, FBtr0086994;Name=mbl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33197-RB, FlyBase+Annotation+IDs:CG33197-RD" - - - - -	6294	12,866,986 – 12,867,093	-	6	120	77.40	-1.36	0.62	0.588259
3899	2R_DroMel_CAF1	12,868,737 – 12,868,847	- - - - - - - - -	6295	12,868,737 – 12,868,847	-	5	114	87.81	-1.58	0.85	0.771487
3900	2R_DroMel_CAF1	12,868,991 – 12,869,103	- - - - - - - - -	6296	12,868,991 – 12,869,103	+	6	120	80.76	-1.28	0.81	0.645810
3901	2R_DroMel_CAF1	12,869,183 – 12,869,327	- - - - - - - - -	6297	12,869,183 – 12,869,291	+	6	108	93.93	-1.99	0.96	0.998907
				6298	12,869,183 – 12,869,291	-	6	108	93.93	-0.83	0.98	0.707379
				6299	12,869,223 – 12,869,327	+	6	107	87.22	-1.08	1.00	0.712762
3902	2R_DroMel_CAF1	12,869,984 – 12,870,095	- - - - - - - - -	6300	12,869,984 – 12,870,095	+	6	113	91.59	-2.35	0.83	0.843380
3902	2R_DroMel_CAF1	12,869,984 – 12,870,095	- - - - - - - - -	6301	12,869,984 – 12,870,095	-	6	113	91.59	-2.37	0.81	0.752973
3903	2R_DroMel_CAF1	12,870,646 – 12,870,762	- - - - - - - - -	6302	12,870,646 – 12,870,762	+	6	119	79.77	-1.59	0.59	0.530966
3904	2R_DroMel_CAF1	12,873,668 – 12,873,777	- - - - - - - - -	6303	12,873,668 – 12,873,777	+	4	109	85.34	-0.97	0.99	0.520481
3905	2R_DroMel_CAF1	12,877,606 – 12,877,698	- - - "knownCDS=texon10663;Parent=CG_NCBI_GNO_32470178, CG_RGUI_GID_mRNA_40003673" - - - - -	6304	12,877,606 – 12,877,698	-	6	101	77.82	-1.18	0.76	0.774721
3906	2R_DroMel_CAF1	12,877,908 – 12,878,003	- - - "knownCDS=texon10663;Parent=CG_NCBI_GNO_32470178, CG_RGUI_GID_mRNA_40003673" - - - - -	6305	12,877,908 – 12,878,003	-	5	107	72.09	-2.12	0.44	0.962105
3907	2R_DroMel_CAF1	12,878,131 – 12,878,241	- - - "knownCDS=texon10663;Parent=CG_NCBI_GNO_32470178, CG_RGUI_GID_mRNA_40003673" - - - - -	6306	12,878,131 – 12,878,241	+	6	119	77.22	-1.51	0.58	0.546306
3907	2R_DroMel_CAF1	12,878,131 – 12,878,241		6307	12,878,131 – 12,878,241	-	6	119	77.22	-1.80	0.53	0.633000
3908	2R_DroMel_CAF1	12,878,362 – 12,878,572	- - - "knownCDS=texon10663;Parent=CG_NCBI_GNO_32470178, CG_RGUI_GID_mRNA_40003673" - - - - -	6308	12,878,362 – 12,878,452	-	6	111	72.16	-1.84	0.42	0.665719
				6309	12,878,412 – 12,878,532	+	4	120	80.57	-2.16	0.63	0.881214
				6310	12,878,412 – 12,878,532	-	4	120	80.57	-1.93	0.63	0.751320
				6311	12,878,452 – 12,878,572	+	4	120	81.56	-1.90	0.60	0.618418
				6312	12,878,452 – 12,878,572	-	4	120	81.56	-2.05	0.60	0.703337
3909	2R_DroMel_CAF1	12,883,847 – 12,883,944	- - "RNAmicro=f:12883847_t:12883950_strand:+_p:0.541843" - - - - - -	6313	12,883,847 – 12,883,944	+	5	104	75.45	-1.84	0.77	0.979027
3910	2R_DroMel_CAF1	12,887,890 – 12,887,985	- - - "knownCDS=Parent=FBtr0086994;Name=mbl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33197-RD" - - - - -	6314	12,887,890 – 12,887,985	+	6	118	79.59	-1.69	0.80	0.883746
3911	2R_DroMel_CAF1	12,888,771 – 12,888,879	- - - - - - - - -	6315	12,888,771 – 12,888,879	+	6	117	82.82	-2.74	0.54	0.597030
3911	2R_DroMel_CAF1	12,888,771 – 12,888,879	- - - - - - - - -	6316	12,888,771 – 12,888,879	-	6	117	82.82	-2.35	0.67	0.736424
3912	2R_DroMel_CAF1	12,889,209 – 12,889,308	- - - - - - - - -	6317	12,889,209 – 12,889,308	+	6	112	72.77	-2.04	0.40	0.809095
3913	2R_DroMel_CAF1	12,895,389 – 12,895,491	- - - - - - - - -	6318	12,895,389 – 12,895,491	+	5	102	83.66	-2.22	0.82	0.957846
3914	2R_DroMel_CAF1	12,898,737 – 12,898,833	- - - - - - - - -	6319	12,898,737 – 12,898,833	-	6	97	92.52	-1.23	0.88	0.505726
3915	2R_DroMel_CAF1	12,900,940 – 12,901,073	- - - - - - - - -	6320	12,900,940 – 12,901,035	-	6	116	75.57	-1.74	0.56	0.783681
3915	2R_DroMel_CAF1	12,900,940 – 12,901,073	- - - - - - - - -	6321	12,900,980 – 12,901,073	+	5	108	78.98	-1.88	0.66	0.849161
3916	2R_DroMel_CAF1	12,902,412 – 12,902,512	- - - - - - - - -	6322	12,902,412 – 12,902,512	-	6	106	80.52	-1.92	0.60	0.698436
3917	2R_DroMel_CAF1	12,906,562 – 12,906,734	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000096; Name=Dmel_Ala_TGC_14000096;TFAMID=DmelATGC-12906708" - - - "Rfam=AE003466.2/45871-45942_RF00005;tRNA;\|7e-18" "Noncode=n4997,u4398,U33851,BC1,Peromyscus_maniculatus_(deer_mouse)\|9e-07" - - "Flybase=FBgn0050232:CR30232:cytosolic_tRNA_gene\|2e-36"	6323	12,906,562 – 12,906,669	+	6	110	77.46	-1.43	0.78	0.897027
				6324	12,906,562 – 12,906,669	-	6	110	77.46	-1.19	0.68	0.622806
				6325	12,906,591 – 12,906,709	-	6	120	77.32	-1.63	0.96	0.934107
				6326	12,906,629 – 12,906,734	-	6	115	80.51	-1.33	0.82	0.700470
3918	2R_DroMel_CAF1	12,907,082 – 12,907,213	"known=exon_Parent=Dmel\CR_TRNA_ATT_14000097" - - - "Rfam=AE003466.2/45871-45942_RF00005;tRNA;\|3e-19" - - - "Flybase=FBgn0011879:transfer_RNA:his:56E:cytosolic_tRNA_gene\|1e-33"	6327	12,907,082 – 12,907,188	-	6	119	80.51	-1.32	0.83	0.694534
				6328	12,907,122 – 12,907,213	+	6	103	71.25	-1.22	0.61	0.631317
				6329	12,907,122 – 12,907,213	-	6	103	71.25	-1.29	0.60	0.677520
3919	2R_DroMel_CAF1	12,912,212 – 12,912,304	- - - - - - - - -	6330	12,912,212 – 12,912,304	+	6	96	88.29	-2.11	0.79	0.544313
3920	2R_DroMel_CAF1	12,917,931 – 12,918,033	- - - - - - - - -	6331	12,917,931 – 12,918,033	+	5	110	80.92	-2.53	0.59	0.953892
3921	2R_DroMel_CAF1	12,919,145 – 12,919,360	- - - "knownCDS=Parent=FBtr0086909;Name=Sip1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10939-RA" - - - - -	6332	12,919,145 – 12,919,264	-	6	119	81.57	-1.59	0.64	0.542184
3921	2R_DroMel_CAF1	12,919,145 – 12,919,360		6333	12,919,264 – 12,919,360	+	6	108	83.93	-1.82	0.70	0.508700
3922	2R_DroMel_CAF1	12,919,378 – 12,919,468	- - - "knownCDS=Parent=FBtr0086909;Name=Sip1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10939-RA" - - - - -	6334	12,919,378 – 12,919,468	-	6	93	78.17	-1.12	0.68	0.548732
3923	2R_DroMel_CAF1	12,922,243 – 12,922,393	- - - - - - - - -	6335	12,922,243 – 12,922,363	+	4	120	91.11	-2.23	0.76	0.799176
				6336	12,922,243 – 12,922,363	-	4	120	91.11	-2.18	0.75	0.769038
				6337	12,922,283 – 12,922,393	+	4	111	90.39	-3.64	0.84	0.990044
				6338	12,922,283 – 12,922,393	-	4	111	90.39	-3.76	0.83	0.986033
3924	2R_DroMel_CAF1	12,923,135 – 12,923,255	- - - - - - - - -	6339	12,923,135 – 12,923,255	-	4	120	94.84	-1.73	0.82	0.520723
3925	2R_DroMel_CAF1	12,938,740 – 12,938,849	- - - "knownCDS=Parent=FBtr0086914, FBtr0086915;Name=l(2)k01209-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4798-RC, FlyBase+Annotation+IDs:CG4798-RD" - - - - -	6340	12,938,740 – 12,938,849	+	6	120	75.99	-1.23	0.67	0.716061
3926	2R_DroMel_CAF1	12,950,127 – 12,950,222	- - - - - - - - -	6341	12,950,127 – 12,950,222	+	6	99	68.91	-1.68	0.52	0.856032
3927	2R_DroMel_CAF1	12,950,465 – 12,950,575	- - - - - - - - -	6342	12,950,465 – 12,950,575	+	4	111	94.14	-1.89	0.86	0.819592
3928	2R_DroMel_CAF1	12,951,523 – 12,951,650	- - - - - - - - -	6343	12,951,523 – 12,951,615	+	6	108	72.23	-2.11	0.45	0.937582
				6344	12,951,523 – 12,951,615	-	6	108	72.23	-2.03	0.56	0.972674
				6345	12,951,548 – 12,951,650	-	6	103	79.62	-1.85	0.61	0.775106
3929	2R_DroMel_CAF1	12,953,460 – 12,953,563	- - - - - - - - -	6346	12,953,460 – 12,953,563	-	4	106	85.40	-1.75	0.66	0.630981
3930	2R_DroMel_CAF1	12,954,245 – 12,954,335	- - - - - - - - -	6347	12,954,245 – 12,954,335	-	3	92	66.79	-2.35	0.42	0.684797
3931	2R_DroMel_CAF1	12,958,166 – 12,958,268	- - - - - - - - -	6348	12,958,166 – 12,958,268	-	3	117	73.28	-1.65	0.58	0.650754
3932	2R_DroMel_CAF1	12,973,260 – 12,973,352	- - - - - - - - -	6349	12,973,260 – 12,973,352	+	5	92	96.96	-2.21	0.90	0.996948
3932	2R_DroMel_CAF1	12,973,260 – 12,973,352	- - - - - - - - -	6350	12,973,260 – 12,973,352	-	5	92	96.96	-2.85	0.94	0.999889
3933	2R_DroMel_CAF1	12,974,827 – 12,974,917	- - - - - - - - -	6351	12,974,827 – 12,974,917	-	5	94	93.01	-1.18	0.89	0.589445
3934	2R_DroMel_CAF1	12,977,638 – 12,977,730	- - - "knownCDS=Parent=FBtr0086921, FBtr0086922;Name=CG14478-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14478-RA, FlyBase+Annotation+IDs:CG14478-RB" - - - - -	6352	12,977,638 – 12,977,730	+	6	104	86.18	-2.04	0.79	0.606874
3935	2R_DroMel_CAF1	12,980,034 – 12,980,125	- - - - - - - - -	6353	12,980,034 – 12,980,125	-	6	97	81.57	-3.69	0.55	0.951133
3936	2R_DroMel_CAF1	12,989,079 – 12,989,189	- - - - - - - - -	6354	12,989,079 – 12,989,189	+	5	111	92.39	-1.77	0.88	0.979570
3936	2R_DroMel_CAF1	12,989,079 – 12,989,189	- - - - - - - - -	6355	12,989,079 – 12,989,189	-	5	111	92.39	-2.12	0.85	0.990939
3937	2R_DroMel_CAF1	12,994,112 – 12,994,207	- - - - - - - - -	6356	12,994,112 – 12,994,207	-	5	100	85.57	-1.83	0.77	0.774871
3938	2R_DroMel_CAF1	12,995,115 – 12,995,249	- - - - - - - - -	6357	12,995,115 – 12,995,209	+	6	98	73.45	-1.79	0.45	0.580250
3938	2R_DroMel_CAF1	12,995,115 – 12,995,249	- - - - - - - - -	6358	12,995,150 – 12,995,249	+	6	103	78.94	-1.36	0.64	0.569841
3939	2R_DroMel_CAF1	13,006,369 – 13,006,529	- - - "knownCDS=Parent=FBtr0086927, FBtr0086928;Name=CG30104-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30104-RB, FlyBase+Annotation+IDs:CG30104-RA" - - - - -	6359	13,006,369 – 13,006,489	+	6	120	77.17	-1.43	0.59	0.527707
3939	2R_DroMel_CAF1	13,006,369 – 13,006,529		6360	13,006,409 – 13,006,529	+	6	120	82.56	-1.96	0.73	0.740625
3940	2R_DroMel_CAF1	13,006,904 – 13,007,008	- - - - - - - - -	6361	13,006,904 – 13,007,008	+	6	112	70.63	-1.82	0.57	0.948678
3941	2R_DroMel_CAF1	13,012,193 – 13,012,345	- - - - - - - - -	6362	13,012,193 – 13,012,283	+	3	90	85.23	-2.31	0.79	0.855672
3941	2R_DroMel_CAF1	13,012,193 – 13,012,345	- - - - - - - - -	6363	13,012,253 – 13,012,345	+	6	103	81.29	-2.30	0.56	0.692616
3942	2R_DroMel_CAF1	13,015,592 – 13,015,708	- - - - - - - - -	6364	13,015,592 – 13,015,708	+	4	119	73.96	-3.07	0.39	0.922512
3942	2R_DroMel_CAF1	13,015,592 – 13,015,708	- - - - - - - - -	6365	13,015,592 – 13,015,708	-	4	119	73.96	-2.24	0.56	0.968885
3943	2R_DroMel_CAF1	13,018,486 – 13,018,775	- - - - - - - - -	6366	13,018,486 – 13,018,599	+	6	120	84.72	-2.31	0.70	0.539351
				6367	13,018,599 – 13,018,710	-	5	113	81.08	-2.18	0.52	0.729182
				6368	13,018,670 – 13,018,775	+	3	106	75.24	-1.55	0.80	0.962812
				6369	13,018,670 – 13,018,775	-	3	106	75.24	-1.42	0.76	0.882671
3944	2R_DroMel_CAF1	13,020,694 – 13,020,814	- - - "knownCDS=Parent=FBtr0100358;Name=CG18431-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18431-RA" - - - - -	6370	13,020,694 – 13,020,814	+	6	120	90.67	-1.42	0.88	0.625028
3945	2R_DroMel_CAF1	13,020,854 – 13,020,948	- - - - - - - - -	6371	13,020,854 – 13,020,948	-	4	101	75.00	-2.14	0.53	0.857137
3946	2R_DroMel_CAF1	13,022,417 – 13,022,513	- - - "knownCDS=Parent=FBtr0100122, FBtr0100123;Name=CG4844-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4844-RA, FlyBase+Annotation+IDs:CG4844-RB" - - - - -	6372	13,022,417 – 13,022,513	-	6	96	84.65	-2.24	0.75	0.669489
3947	2R_DroMel_CAF1	13,025,508 – 13,025,617	- - - - - - - - -	6373	13,025,508 – 13,025,617	-	3	120	74.57	-2.00	0.53	0.664881
3948	2R_DroMel_CAF1	13,029,054 – 13,029,147	- - - - - - - - -	6374	13,029,054 – 13,029,147	+	4	110	73.23	-2.40	0.43	0.782522
3948	2R_DroMel_CAF1	13,029,054 – 13,029,147	- - - - - - - - -	6375	13,029,054 – 13,029,147	-	4	110	73.23	-3.31	0.35	0.901535
3949	2R_DroMel_CAF1	13,029,258 – 13,029,360	- - - - - - - - -	6376	13,029,258 – 13,029,360	-	4	120	80.63	-2.55	0.80	0.993284
3950	2R_DroMel_CAF1	13,029,727 – 13,029,847	- - - "knownCDS=Parent=FBtr0086938;Name=CG4853-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4853-RA" - - - - -	6377	13,029,727 – 13,029,847	-	6	120	79.00	-1.75	0.55	0.522374
3951	2R_DroMel_CAF1	13,039,190 – 13,039,293	- - - "knownCDS=Parent=FBtr0086948, FBtr0086950;Name=l(2)k07433-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33130-RA, FlyBase+Annotation+IDs:CG33130-RC" - - - - -	6378	13,039,190 – 13,039,293	+	6	120	78.80	-1.39	0.67	0.690896
3952	2R_DroMel_CAF1	13,041,695 – 13,041,850	- - - "knownCDS=Parent=FBtr0086950;Name=l(2)k07433-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33130-RC" - - - - -	6379	13,041,695 – 13,041,815	+	6	120	88.44	-3.24	0.73	0.576737
				6380	13,041,695 – 13,041,815	-	6	120	88.44	-3.05	0.74	0.581042
				6381	13,041,735 – 13,041,850	-	6	119	86.70	-2.60	0.74	0.564687
3953	2R_DroMel_CAF1	13,046,536 – 13,046,627	- - - - - - - - -	6382	13,046,536 – 13,046,627	+	6	98	81.71	-1.48	0.83	0.703302
3954	2R_DroMel_CAF1	13,047,388 – 13,047,516	- - - - - - - - -	6383	13,047,388 – 13,047,482	-	6	110	79.10	-1.93	0.64	0.870444
3954	2R_DroMel_CAF1	13,047,388 – 13,047,516	- - - - - - - - -	6384	13,047,425 – 13,047,516	-	6	112	71.58	-2.35	0.34	0.931200
3955	2R_DroMel_CAF1	13,048,926 – 13,049,055	- - - - - - - - -	6385	13,048,926 – 13,049,026	+	5	114	91.10	-2.50	0.83	0.996237
				6386	13,048,926 – 13,049,026	-	5	114	91.10	-3.03	0.71	0.879631
				6387	13,048,960 – 13,049,055	+	5	120	85.33	-2.03	0.73	0.818455
				6388	13,048,960 – 13,049,055	-	5	120	85.33	-3.11	0.73	0.989259
3956	2R_DroMel_CAF1	13,050,156 – 13,050,253	- - - - - - - - -	6389	13,050,156 – 13,050,253	-	6	105	78.57	-1.92	0.72	0.933450
3957	2R_DroMel_CAF1	13,050,705 – 13,050,819	- - - - - - - - -	6390	13,050,705 – 13,050,819	+	5	115	89.07	-1.91	0.72	0.643237
3958	2R_DroMel_CAF1	13,054,642 – 13,054,852	- - - "knownCDS=Parent=FBtr0086943;Name=CG18432-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18432-RA" - - - - -	6391	13,054,642 – 13,054,738	+	6	96	79.86	-1.50	0.61	0.509108
3958	2R_DroMel_CAF1	13,054,642 – 13,054,852		6392	13,054,738 – 13,054,852	-	6	114	84.44	-1.74	0.75	0.513050
3959	2R_DroMel_CAF1	13,055,056 – 13,055,176	- - - "knownCDS=Parent=FBtr0086943;Name=CG18432-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18432-RA" - - - - -	6393	13,055,056 – 13,055,176	+	6	120	82.39	-2.05	0.73	0.779563
3959	2R_DroMel_CAF1	13,055,056 – 13,055,176		6394	13,055,056 – 13,055,176	-	6	120	82.39	-1.69	0.73	0.660979
3960	2R_DroMel_CAF1	13,057,181 – 13,057,288	- - - "knownCDS=Parent=FBtr0086944;Name=CG18631-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18631-RA" - - - - -	6395	13,057,181 – 13,057,288	+	6	113	77.90	-0.85	0.75	0.500000
3961	2R_DroMel_CAF1	13,068,191 – 13,068,307	- - - "knownCDS=Parent=FBtr0086946;Name=MESR4-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4903-RA" - - - - -	6396	13,068,191 – 13,068,307	+	3	116	96.55	-1.84	0.92	0.680238
3961	2R_DroMel_CAF1	13,068,191 – 13,068,307		6397	13,068,191 – 13,068,307	-	3	116	96.55	-1.89	0.94	0.772561
3962	2R_DroMel_CAF1	13,070,143 – 13,070,238	- - - "knownCDS=Parent=FBtr0086946;Name=MESR4-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4903-RA" - - - - -	6398	13,070,143 – 13,070,238	-	6	99	80.92	-1.85	0.62	0.692568
3963	2R_DroMel_CAF1	13,077,871 – 13,077,970	- - - "knownCDS=Parent=FBtr0086826;Name=Klp54D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15844-RA" - - - - -	6399	13,077,871 – 13,077,970	+	6	99	76.28	-1.97	0.46	0.638353
3964	2R_DroMel_CAF1	13,078,773 – 13,078,874	- - - "knownCDS=Parent=FBtr0086826;Name=Klp54D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15844-RA" - - - - -	6400	13,078,773 – 13,078,874	+	6	116	70.56	-2.35	0.29	0.901645
3965	2R_DroMel_CAF1	13,097,103 – 13,097,318	- - - "knownCDS=Parent=FBtr0086903;Name=CG6484-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6484-RA" - - - - -	6401	13,097,103 – 13,097,198	-	3	95	92.98	-1.91	0.90	0.724716
				6402	13,097,158 – 13,097,278	-	3	120	97.22	-1.76	0.94	0.692205
				6403	13,097,198 – 13,097,318	+	3	120	95.56	-1.87	0.97	0.853792
3966	2R_DroMel_CAF1	13,098,723 – 13,098,908	- - - - - - - - -	6404	13,098,723 – 13,098,829	+	3	120	83.82	-1.61	0.89	0.846000
				6405	13,098,723 – 13,098,829	-	3	120	83.82	-1.41	0.88	0.704218
				6406	13,098,803 – 13,098,908	-	3	120	83.19	-0.76	0.93	0.667101
3967	2R_DroMel_CAF1	13,099,028 – 13,099,148	- - - - - - - - -	6407	13,099,028 – 13,099,148	-	3	120	91.67	-2.21	0.90	0.864180
3968	2R_DroMel_CAF1	13,101,471 – 13,101,586	- - - - - - - - -	6408	13,101,471 – 13,101,586	-	6	116	81.75	-1.45	0.81	0.667556
3969	2R_DroMel_CAF1	13,102,196 – 13,102,288	- - - "knownCDS=Parent=FBtr0086900;Name=RhoGAP54D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6477-RA" - - - - -	6409	13,102,196 – 13,102,288	+	6	93	82.73	-1.71	0.65	0.500000
3970	2R_DroMel_CAF1	13,102,487 – 13,102,586	- - - "knownCDS=Parent=FBtr0086900;Name=RhoGAP54D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6477-RA" - - - - -	6410	13,102,487 – 13,102,586	+	6	108	81.90	-2.10	0.60	0.646286
3971	2R_DroMel_CAF1	13,103,130 – 13,103,229	- - - "knownCDS=Parent=FBtr0086900;Name=RhoGAP54D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6477-RA" - - - - -	6411	13,103,130 – 13,103,229	-	6	99	78.39	-1.69	0.65	0.838958
3972	2R_DroMel_CAF1	13,103,737 – 13,103,853	- - - - - - - - -	6412	13,103,737 – 13,103,853	-	4	120	78.33	-1.80	0.58	0.526551
3973	2R_DroMel_CAF1	13,104,357 – 13,104,477	- - - "knownCDS=Parent=FBtr0086900;Name=RhoGAP54D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6477-RA" - - - - -	6413	13,104,357 – 13,104,477	-	6	120	76.28	-2.28	0.42	0.821287
3974	2R_DroMel_CAF1	13,106,015 – 13,106,117	- - - - - - - - -	6414	13,106,015 – 13,106,117	+	6	103	73.56	-1.10	0.66	0.633414
3975	2R_DroMel_CAF1	13,112,860 – 13,112,950	- - - - - - - - -	6415	13,112,860 – 13,112,950	+	3	90	86.31	-2.09	0.68	0.539355
3976	2R_DroMel_CAF1	13,119,384 – 13,119,500	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000098; Name=Dmel_Phe_GAA_14000098;TFAMID=DmelFGAA-13119470" "tRNAscan=type:Phe:anticodon:GAA f:13119397_t:13119482_strand=-_cove=82.98" - - "Rfam=BX004780.4/38540-38612_RF00005;tRNA;\|1e-30" - - - "Flybase=FBgn0011857:transfer_RNA:phe2:56EF:cytosolic_tRNA_gene\|3e-37"	6416	13,119,384 – 13,119,500	+	5	117	77.88	-2.34	0.73	0.989166
3977	2R_DroMel_CAF1	13,120,733 – 13,120,824	- - - - - - - - -	6417	13,120,733 – 13,120,824	+	6	101	76.92	-2.00	0.53	0.842889
3978	2R_DroMel_CAF1	13,127,595 – 13,127,690	- - - - - - - - -	6418	13,127,595 – 13,127,690	+	6	119	73.42	-2.90	0.48	0.997324
3978	2R_DroMel_CAF1	13,127,595 – 13,127,690	- - - - - - - - -	6419	13,127,595 – 13,127,690	-	6	119	73.42	-2.19	0.60	0.986086
3979	2R_DroMel_CAF1	13,131,608 – 13,131,799	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002427; Name=DmOr_aca4;Dbxref=FB:FBgn0082922, GB:AJ809557" - - - - - - - "Flybase=FBgn0082922:snoRNA:Or-aca4:nuclear_small_nucleolar_RNA_gene\|4e-90"	6420	13,131,608 – 13,131,698	+	6	105	79.62	-1.58	0.80	0.854332
				6421	13,131,608 – 13,131,698	-	6	105	79.62	-1.16	0.75	0.633375
				6422	13,131,698 – 13,131,799	+	6	116	78.46	-0.98	0.74	0.565772
3980	2R_DroMel_CAF1	13,134,021 – 13,134,119	- - - - - - - - -	6423	13,134,021 – 13,134,119	-	6	98	79.10	-1.29	0.68	0.636205
3981	2R_DroMel_CAF1	13,139,605 – 13,139,726	- - - - - - - - -	6424	13,139,605 – 13,139,707	+	6	117	82.27	-1.96	0.69	0.717173
				6425	13,139,605 – 13,139,707	-	6	117	82.27	-1.51	0.77	0.637154
				6426	13,139,633 – 13,139,726	+	6	120	83.27	-2.18	0.69	0.670078
				6427	13,139,633 – 13,139,726	-	6	120	83.27	-2.01	0.79	0.777502
3982	2R_DroMel_CAF1	13,144,673 – 13,144,813	- - - - - - - - -	6428	13,144,673 – 13,144,783	+	6	117	80.19	-2.60	0.48	0.788115
3982	2R_DroMel_CAF1	13,144,673 – 13,144,813	- - - - - - - - -	6429	13,144,712 – 13,144,813	+	5	101	82.94	-2.49	0.59	0.875665
3983	2R_DroMel_CAF1	13,145,223 – 13,145,328	- - - - - - - - -	6430	13,145,223 – 13,145,328	+	6	114	77.60	-2.13	0.48	0.745904
3984	2R_DroMel_CAF1	13,166,052 – 13,166,164	- - - - - - - - -	6431	13,166,052 – 13,166,164	-	6	120	79.71	-1.68	0.77	0.868994
3985	2R_DroMel_CAF1	13,175,483 – 13,175,587	- - - - - - - - -	6432	13,175,483 – 13,175,587	+	5	116	78.42	-1.84	0.68	0.862706
3985	2R_DroMel_CAF1	13,175,483 – 13,175,587	- - - - - - - - -	6433	13,175,483 – 13,175,587	-	5	116	78.42	-2.21	0.68	0.968420
3986	2R_DroMel_CAF1	13,183,816 – 13,183,908	- - - - - - - - -	6434	13,183,816 – 13,183,908	+	6	105	76.68	-3.86	0.74	0.984189
3986	2R_DroMel_CAF1	13,183,816 – 13,183,908	- - - - - - - - -	6435	13,183,816 – 13,183,908	-	6	105	76.68	-2.57	0.46	0.956550
3987	2R_DroMel_CAF1	13,186,285 – 13,186,376	- - - - - - - - -	6436	13,186,285 – 13,186,376	+	6	91	80.88	-2.66	0.61	0.904296
3987	2R_DroMel_CAF1	13,186,285 – 13,186,376	- - - - - - - - -	6437	13,186,285 – 13,186,376	-	6	91	80.88	-3.53	0.90	0.979959
3988	2R_DroMel_CAF1	13,187,747 – 13,187,853	- - - - - - - - -	6438	13,187,747 – 13,187,853	+	6	120	79.60	-1.68	0.59	0.588618
3988	2R_DroMel_CAF1	13,187,747 – 13,187,853	- - - - - - - - -	6439	13,187,747 – 13,187,853	-	6	120	79.60	-1.26	0.65	0.500000
3989	2R_DroMel_CAF1	13,188,943 – 13,189,047	- - - - - - - - -	6440	13,188,943 – 13,189,047	+	6	113	81.30	-3.01	0.51	0.852714
3990	2R_DroMel_CAF1	13,194,290 – 13,194,439	- - - - - - - - -	6441	13,194,290 – 13,194,399	+	3	112	93.99	-1.73	0.93	0.686839
3990	2R_DroMel_CAF1	13,194,290 – 13,194,439	- - - - - - - - -	6442	13,194,322 – 13,194,439	+	3	120	90.99	-2.38	0.90	0.923905
3991	2R_DroMel_CAF1	13,196,861 – 13,196,952	- - - - - - - - -	6443	13,196,861 – 13,196,952	+	5	100	81.68	-2.34	0.67	0.938369
3991	2R_DroMel_CAF1	13,196,861 – 13,196,952	- - - - - - - - -	6444	13,196,861 – 13,196,952	-	5	100	81.68	-1.68	0.70	0.645572
3992	2R_DroMel_CAF1	13,206,398 – 13,206,550	- - - - - - - - -	6445	13,206,398 – 13,206,517	-	6	120	77.20	-2.20	0.51	0.886535
3992	2R_DroMel_CAF1	13,206,398 – 13,206,550	- - - - - - - - -	6446	13,206,438 – 13,206,550	-	6	112	78.49	-1.72	0.72	0.904120
3993	2R_DroMel_CAF1	13,208,644 – 13,208,736	- - - - - - - - -	6447	13,208,644 – 13,208,736	-	6	100	82.18	-2.07	0.70	0.767918
3994	2R_DroMel_CAF1	13,212,516 – 13,212,620	- - - - - - - - -	6448	13,212,516 – 13,212,620	-	5	105	90.33	-1.62	0.74	0.523957
3995	2R_DroMel_CAF1	13,217,903 – 13,218,044	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002443; Name=snoRNA:U27:54Ec;Dbxref=FB:FBgn0063386,GB:NR_001770" - - - - "Noncode=n427,u397,AE003802,U27,Drosophila_melanogaster_(fruit_fly)\|2e-32" - - "Flybase=FBgn0063386:snoRNA:U27:54Ec:nuclear_small_nucleolar_RNA_gene\|1e-33"	6449	13,217,903 – 13,218,006	-	6	119	79.07	-2.44	0.46	0.777107
3995	2R_DroMel_CAF1	13,217,903 – 13,218,044		6450	13,217,932 – 13,218,044	-	6	120	81.78	-2.27	0.58	0.665358
3996	2R_DroMel_CAF1	13,220,352 – 13,220,459	- - - - - - - - -	6451	13,220,352 – 13,220,459	+	6	120	60.52	-2.35	0.36	0.951395
3997	2R_DroMel_CAF1	13,223,836 – 13,223,933	- - - - - - - - -	6452	13,223,836 – 13,223,933	+	4	106	77.34	-3.87	0.55	0.999548
3998	2R_DroMel_CAF1	13,224,807 – 13,225,030	- - - - - - - - -	6453	13,224,807 – 13,224,914	-	3	120	83.61	-2.06	0.79	0.827319
3998	2R_DroMel_CAF1	13,224,807 – 13,225,030	- - - - - - - - -	6454	13,224,914 – 13,225,030	+	3	116	82.76	-2.63	0.78	0.968218
3999	2R_DroMel_CAF1	13,227,165 – 13,227,264	- - - - - - - - -	6455	13,227,165 – 13,227,264	+	3	109	85.53	-2.34	0.82	0.880970
4000	2R_DroMel_CAF1	13,230,378 – 13,230,468	- - - - - - - - -	6456	13,230,378 – 13,230,468	+	3	111	82.28	-1.89	0.79	0.819058
4001	2R_DroMel_CAF1	13,234,263 – 13,234,397	- - - - - - - - -	6457	13,234,263 – 13,234,361	+	3	98	96.26	-2.17	0.82	0.500000
4001	2R_DroMel_CAF1	13,234,263 – 13,234,397	- - - - - - - - -	6458	13,234,294 – 13,234,397	+	4	116	75.19	-1.91	0.55	0.692521
4002	2R_DroMel_CAF1	13,234,504 – 13,234,636	- - - - - - - - -	6459	13,234,504 – 13,234,596	-	3	92	97.83	-1.95	0.96	0.841524
4002	2R_DroMel_CAF1	13,234,504 – 13,234,636	- - - - - - - - -	6460	13,234,544 – 13,234,636	+	3	92	98.55	-1.50	0.98	0.598386
4003	2R_DroMel_CAF1	13,236,328 – 13,236,425	- - - - - - - - -	6461	13,236,328 – 13,236,425	+	3	97	97.25	-1.70	0.94	0.620200
4003	2R_DroMel_CAF1	13,236,328 – 13,236,425	- - - - - - - - -	6462	13,236,328 – 13,236,425	-	3	97	97.25	-2.06	0.95	0.861973
4004	2R_DroMel_CAF1	13,240,101 – 13,240,257	- - - - - - - - -	6463	13,240,101 – 13,240,220	-	3	120	79.37	-1.45	0.86	0.884354
4004	2R_DroMel_CAF1	13,240,101 – 13,240,257	- - - - - - - - -	6464	13,240,141 – 13,240,257	-	3	120	72.86	-1.24	0.75	0.838334
4005	2R_DroMel_CAF1	13,240,337 – 13,240,446	- - - "knownCDS=Parent=FBtr0086885;Name=CG6410-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6410-RA" - - - - -	6465	13,240,337 – 13,240,446	-	3	120	81.67	-1.85	0.69	0.708422
4006	2R_DroMel_CAF1	13,241,606 – 13,241,715	- - - - - - - - -	6466	13,241,606 – 13,241,715	-	5	120	79.19	-2.38	0.67	0.978420
4007	2R_DroMel_CAF1	13,241,893 – 13,242,013	- - - - - - - - -	6467	13,241,893 – 13,242,013	-	6	120	82.72	-1.59	0.69	0.541922
4008	2R_DroMel_CAF1	13,247,160 – 13,247,271	- - - - - - - - -	6468	13,247,160 – 13,247,271	+	6	111	77.24	-1.36	0.64	0.671056
4008	2R_DroMel_CAF1	13,247,160 – 13,247,271	- - - - - - - - -	6469	13,247,160 – 13,247,271	-	6	111	77.24	-1.91	0.53	0.757634
4009	2R_DroMel_CAF1	13,247,557 – 13,247,677	- - - "knownCDS=Parent=FBtr0086862;Name=CG4984-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4984-RA" - - - - -	6470	13,247,557 – 13,247,677	-	6	120	77.39	-1.02	0.71	0.586619
4010	2R_DroMel_CAF1	13,250,364 – 13,250,457	- - - "knownCDS=Parent=FBtr0086883, FBtr0086884;Name=CG6406-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6406-RB, FlyBase+Annotation+IDs:CG6406-RA" - - - - -	6471	13,250,364 – 13,250,457	+	6	96	79.48	-2.01	0.57	0.753654
4010	2R_DroMel_CAF1	13,250,364 – 13,250,457		6472	13,250,364 – 13,250,457	-	6	96	79.48	-0.95	0.81	0.519616
4011	2R_DroMel_CAF1	13,252,019 – 13,252,116	- - - - - - - - -	6473	13,252,019 – 13,252,116	+	5	101	79.22	-2.10	0.57	0.853351
4011	2R_DroMel_CAF1	13,252,019 – 13,252,116	- - - - - - - - -	6474	13,252,019 – 13,252,116	-	5	101	79.22	-2.43	0.73	0.987598
4012	2R_DroMel_CAF1	13,254,694 – 13,254,795	- - - - - - - - -	6475	13,254,694 – 13,254,795	+	4	101	75.91	-2.12	0.59	0.934978
4013	2R_DroMel_CAF1	13,257,021 – 13,257,138	- - - "knownCDS=Parent=FBtr0086864;Name=CG4996-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4996-RA" - - - - -	6476	13,257,021 – 13,257,138	-	6	120	79.17	-2.01	0.56	0.768991
4014	2R_DroMel_CAF1	13,262,630 – 13,262,738	- - - "knownCDS=Parent=FBtr0086881;Name=sub-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12298-RA" - - - - -	6477	13,262,630 – 13,262,738	-	6	108	81.17	-1.55	0.70	0.671225
4015	2R_DroMel_CAF1	13,262,877 – 13,262,968	- - - - - - - - -	6478	13,262,877 – 13,262,968	-	6	102	76.47	-1.75	0.60	0.859110
4016	2R_DroMel_CAF1	13,265,973 – 13,266,064	- - - "knownCDS=Parent=FBtr0089546;Name=CG5002-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5002-RA" - - - - -	6479	13,265,973 – 13,266,064	+	6	98	80.21	-1.79	0.68	0.813413
4017	2R_DroMel_CAF1	13,271,514 – 13,271,627	- - - - - - - - -	6480	13,271,514 – 13,271,627	-	3	115	69.66	-2.44	0.74	0.999990
4018	2R_DroMel_CAF1	13,273,889 – 13,273,981	- - - - - - - - -	6481	13,273,889 – 13,273,981	+	6	93	83.15	-2.63	0.61	0.658510
4018	2R_DroMel_CAF1	13,273,889 – 13,273,981	- - - - - - - - -	6482	13,273,889 – 13,273,981	-	6	93	83.15	-2.16	0.67	0.648168
4019	2R_DroMel_CAF1	13,274,041 – 13,274,146	- - - - - - - - -	6483	13,274,041 – 13,274,146	-	6	120	81.94	-2.26	0.54	0.519898
4020	2R_DroMel_CAF1	13,279,953 – 13,280,058	- - - "knownCDS=Parent=FBtr0089559;Name=CG6370-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6370-RA" - - - - -	6484	13,279,953 – 13,280,058	+	6	105	78.81	-1.67	0.58	0.612932
4021	2R_DroMel_CAF1	13,281,724 – 13,281,820	- - - "knownCDS=Parent=FBtr0089559;Name=CG6370-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6370-RA" - - - - -	6485	13,281,724 – 13,281,820	+	6	103	78.03	-1.56	0.60	0.649511
4022	2R_DroMel_CAF1	13,286,481 – 13,286,574	- - - "knownCDS=Parent=FBtr0089556;Name=CG6362-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6362-RA" - - - - -	6486	13,286,481 – 13,286,574	+	6	110	83.65	-2.66	0.68	0.728580
4023	2R_DroMel_CAF1	13,286,720 – 13,286,810	- - - "knownCDS=Parent=FBtr0089556;Name=CG6362-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6362-RA" - - - - -	6487	13,286,720 – 13,286,810	+	6	107	77.78	-1.18	0.79	0.797936
4024	2R_DroMel_CAF1	13,287,026 – 13,287,137	- - - "knownCDS=Parent=FBtr0089556;Name=CG6362-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6362-RA" - - - - -	6488	13,287,026 – 13,287,137	-	6	111	82.21	-1.73	0.72	0.688440
4025	2R_DroMel_CAF1	13,287,320 – 13,287,410	- - - "knownCDS=Parent=FBtr0089556;Name=CG6362-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6362-RA" - - - - -	6489	13,287,320 – 13,287,410	+	5	109	73.55	-1.60	0.55	0.531677
4026	2R_DroMel_CAF1	13,289,618 – 13,289,709	- - - - - - - - -	6490	13,289,618 – 13,289,709	-	6	92	85.32	-1.89	0.83	0.719380
4027	2R_DroMel_CAF1	13,295,039 – 13,295,156	- - - "knownCDS=Parent=FBtr0089554;Name=CG6355-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6355-RA" - - - - -	6491	13,295,039 – 13,295,156	-	6	117	79.32	-1.79	0.59	0.683892
4028	2R_DroMel_CAF1	13,298,638 – 13,298,787	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002263; Name=dme-mir-31a" - - - - - "miRBase=dme-mir-31a\|4e-48" - "Flybase=FBgn0067685:mir-31a:microRNA_encoding_gene\|3e-07"	6492	13,298,638 – 13,298,751	+	6	120	81.93	-1.47	0.81	0.668609
				6493	13,298,638 – 13,298,751	-	6	120	81.93	-4.24	0.91	0.983498
				6494	13,298,673 – 13,298,787	-	6	117	79.54	-1.82	0.65	0.820983
4029	2R_DroMel_CAF1	13,304,640 – 13,304,744	- - - "knownCDS=Parent=FBtr0089550;Name=CG5033-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5033-RA" - - - - -	6495	13,304,640 – 13,304,744	+	6	112	81.62	-1.36	0.73	0.588066
4029	2R_DroMel_CAF1	13,304,640 – 13,304,744		6496	13,304,640 – 13,304,744	-	6	112	81.62	-1.38	0.74	0.610733
4030	2R_DroMel_CAF1	13,307,129 – 13,307,245	- - - "knownCDS=Parent=FBtr0089550;Name=CG5033-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5033-RA" - - - - -	6497	13,307,129 – 13,307,245	+	6	117	76.39	-1.59	0.64	0.850700
4031	2R_DroMel_CAF1	13,310,771 – 13,310,935	- - - - - - - - -	6498	13,310,771 – 13,310,861	+	5	94	90.72	-1.89	0.79	0.892212
4031	2R_DroMel_CAF1	13,310,771 – 13,310,935	- - - - - - - - -	6499	13,310,825 – 13,310,935	+	5	115	97.14	-2.48	0.96	0.999816
4032	2R_DroMel_CAF1	13,314,735 – 13,314,829	- - - - - - - - -	6500	13,314,735 – 13,314,829	-	3	106	84.79	-1.39	0.86	0.543591
4033	2R_DroMel_CAF1	13,315,665 – 13,315,765	- - - - - - - - -	6501	13,315,665 – 13,315,765	+	4	100	85.17	-1.57	0.74	0.625604
4034	2R_DroMel_CAF1	13,322,112 – 13,322,220	- - - - - - - - -	6502	13,322,112 – 13,322,220	-	6	112	78.38	-2.21	0.63	0.941697
4035	2R_DroMel_CAF1	13,325,132 – 13,325,227	- - - - - - - - -	6503	13,325,132 – 13,325,227	+	5	114	89.24	-2.00	0.86	0.981394
4035	2R_DroMel_CAF1	13,325,132 – 13,325,227	- - - - - - - - -	6504	13,325,132 – 13,325,227	-	5	114	89.24	-1.65	0.79	0.745293
4036	2R_DroMel_CAF1	13,326,219 – 13,326,309	- - - - - - - - -	6505	13,326,219 – 13,326,309	-	6	100	79.34	-1.69	0.64	0.773560
4037	2R_DroMel_CAF1	13,327,960 – 13,328,065	- - - - - - - - -	6506	13,327,960 – 13,328,065	+	5	112	78.05	-2.41	0.38	0.949971
4038	2R_DroMel_CAF1	13,331,686 – 13,331,784	- - - - - - - - -	6507	13,331,686 – 13,331,784	+	5	100	91.99	-2.90	0.77	0.985436
4039	2R_DroMel_CAF1	13,334,001 – 13,334,094	- - - - - - - - -	6508	13,334,001 – 13,334,094	+	6	102	91.53	-1.17	0.92	0.660401
4040	2R_DroMel_CAF1	13,338,030 – 13,338,217	- - - - - - - - -	6509	13,338,030 – 13,338,149	-	4	120	79.35	-3.08	0.50	0.959905
4040	2R_DroMel_CAF1	13,338,030 – 13,338,217	- - - - - - - - -	6510	13,338,109 – 13,338,217	-	5	108	96.11	-1.38	0.96	0.935582
4041	2R_DroMel_CAF1	13,338,847 – 13,338,941	- - - - - - - - -	6511	13,338,847 – 13,338,941	-	6	107	81.48	-1.73	0.65	0.649617
4042	2R_DroMel_CAF1	13,342,713 – 13,342,833	- - - "knownCDS=Parent=FBtr0090011;Name=grh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5058-RG" - - - - -	6512	13,342,713 – 13,342,833	+	6	120	78.50	-1.39	0.61	0.500000
4043	2R_DroMel_CAF1	13,343,180 – 13,343,276	- - - "knownCDS=Parent=FBtr0090007, FBtr0090009;Name=grh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5058-RC, FlyBase+Annotation+IDs:CG5058-RA" - - - - -	6513	13,343,180 – 13,343,276	+	6	112	77.81	-1.40	0.74	0.855834
4043	2R_DroMel_CAF1	13,343,180 – 13,343,276		6514	13,343,180 – 13,343,276	-	6	112	77.81	-1.24	0.65	0.577618
4044	2R_DroMel_CAF1	13,345,341 – 13,345,494	- - - - - - - - -	6515	13,345,341 – 13,345,455	+	6	115	83.31	-2.11	0.63	0.525110
				6516	13,345,341 – 13,345,455	-	6	115	83.31	-2.29	0.71	0.728936
				6517	13,345,375 – 13,345,494	+	6	120	79.38	-1.83	0.58	0.678514
				6518	13,345,375 – 13,345,494	-	6	120	79.38	-1.81	0.63	0.795793
4045	2R_DroMel_CAF1	13,352,919 – 13,353,012	- - - - - - - - -	6519	13,352,919 – 13,353,012	+	5	98	84.99	-1.61	0.81	0.653244
4046	2R_DroMel_CAF1	13,357,445 – 13,357,537	- - - - - - - - -	6520	13,357,445 – 13,357,537	+	6	119	73.58	-1.60	0.73	0.969562
4047	2R_DroMel_CAF1	13,359,133 – 13,359,238	- - - - - - - - -	6521	13,359,133 – 13,359,238	-	4	107	84.64	-2.37	0.78	0.961576
4048	2R_DroMel_CAF1	13,365,147 – 13,365,256	- - - - - - - - -	6522	13,365,147 – 13,365,256	+	5	113	92.49	-2.59	0.91	0.999845
4048	2R_DroMel_CAF1	13,365,147 – 13,365,256	- - - - - - - - -	6523	13,365,147 – 13,365,256	-	5	113	92.49	-1.77	0.82	0.897384
4049	2R_DroMel_CAF1	13,366,058 – 13,366,158	- - - "knownCDS=Parent=FBtr0086795;Name=olf186-F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11430-RB" - - - - -	6524	13,366,058 – 13,366,158	-	6	100	88.40	-2.24	0.83	0.816248
4050	2R_DroMel_CAF1	13,368,180 – 13,368,295	- - - - - - - - -	6525	13,368,180 – 13,368,295	+	4	118	86.16	-2.09	0.64	0.685185
4050	2R_DroMel_CAF1	13,368,180 – 13,368,295	- - - - - - - - -	6526	13,368,180 – 13,368,295	-	4	118	86.16	-1.57	0.66	0.533609
4051	2R_DroMel_CAF1	13,370,827 – 13,370,930	- - - - - - - - -	6527	13,370,827 – 13,370,930	+	5	120	76.57	-1.51	0.63	0.528336
4052	2R_DroMel_CAF1	13,372,568 – 13,372,673	- - - "knownCDS=Parent=FBtr0086798;Name=olf186-F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11430-RD" - - - - -	6528	13,372,568 – 13,372,673	-	6	112	80.60	-1.94	0.70	0.852012
4053	2R_DroMel_CAF1	13,373,033 – 13,373,128	- - - - - - - - -	6529	13,373,033 – 13,373,128	+	4	98	81.49	-1.55	0.75	0.583599
4054	2R_DroMel_CAF1	13,373,430 – 13,373,547	- - - - - - - - -	6530	13,373,430 – 13,373,547	+	6	118	82.13	-1.59	0.66	0.541492
4054	2R_DroMel_CAF1	13,373,430 – 13,373,547	- - - - - - - - -	6531	13,373,430 – 13,373,547	-	6	118	82.13	-2.22	0.59	0.614281
4055	2R_DroMel_CAF1	13,376,995 – 13,377,147	- - - "knownCDS=Parent=FBtr0086825;Name=thr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5785-RB" - - - - -	6532	13,376,995 – 13,377,089	+	6	94	79.72	-1.67	0.61	0.663105
4055	2R_DroMel_CAF1	13,376,995 – 13,377,147		6533	13,377,049 – 13,377,147	-	6	98	77.48	-2.02	0.54	0.843388
4056	2R_DroMel_CAF1	13,382,168 – 13,382,303	- - - "knownCDS=Parent=FBtr0086822, FBtr0086823;Name=Mapmodulin-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5784-RB, FlyBase+Annotation+IDs:CG5784-RA" - - - - -	6534	13,382,168 – 13,382,266	+	6	102	78.09	-1.90	0.64	0.901110
4056	2R_DroMel_CAF1	13,382,168 – 13,382,303		6535	13,382,192 – 13,382,303	+	6	120	81.25	-1.83	0.67	0.734146
4057	2R_DroMel_CAF1	13,387,318 – 13,387,423	- - - - - - - - -	6536	13,387,318 – 13,387,423	-	6	120	77.45	-1.64	0.67	0.873689
4058	2R_DroMel_CAF1	13,388,725 – 13,388,852	- - - - - - - - -	6537	13,388,725 – 13,388,831	+	6	108	73.49	-1.86	0.51	0.858160
				6538	13,388,725 – 13,388,831	-	6	108	73.49	-1.48	0.60	0.778155
				6539	13,388,754 – 13,388,852	+	6	108	79.37	-1.41	0.68	0.701377
4059	2R_DroMel_CAF1	13,394,491 – 13,394,611	- - - "knownCDS=Parent=FBtr0086821;Name=CG30325-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30325-RA" - - - - -	6540	13,394,491 – 13,394,611	+	6	120	85.50	-2.16	0.77	0.612905
4059	2R_DroMel_CAF1	13,394,491 – 13,394,611		6541	13,394,491 – 13,394,611	-	6	120	85.50	-2.42	0.85	0.929231
4060	2R_DroMel_CAF1	13,395,187 – 13,395,285	- - - "knownCDS=Parent=FBtr0086820;Name=CG30110-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30110-RA" - - - - -	6542	13,395,187 – 13,395,285	-	5	98	91.91	-2.47	0.83	0.994593
4061	2R_DroMel_CAF1	13,399,231 – 13,399,335	- - - - - - - - -	6543	13,399,231 – 13,399,335	-	6	111	75.13	-2.27	0.33	0.631810
4062	2R_DroMel_CAF1	13,408,870 – 13,408,990	- - - "knownCDS=Parent=FBtr0086818;Name=CG14492-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14492-RA" - - - - -	6544	13,408,870 – 13,408,990	+	6	120	81.39	-2.08	0.58	0.621768
4063	2R_DroMel_CAF1	13,413,178 – 13,413,270	- - - "knownCDS=Parent=FBtr0086802;Name=elk-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5076-RA" - - - - -	6545	13,413,178 – 13,413,270	-	6	100	77.32	-1.14	0.69	0.636713
4064	2R_DroMel_CAF1	13,415,030 – 13,415,137	- - - - - - - - -	6546	13,415,030 – 13,415,137	+	5	111	85.90	-2.04	0.74	0.835759
4065	2R_DroMel_CAF1	13,428,380 – 13,428,473	- - - - - - - - -	6547	13,428,380 – 13,428,473	+	5	102	87.46	-1.43	0.79	0.507083
4065	2R_DroMel_CAF1	13,428,380 – 13,428,473	- - - - - - - - -	6548	13,428,380 – 13,428,473	-	5	102	87.46	-2.07	0.87	0.978891
4066	2R_DroMel_CAF1	13,430,050 – 13,430,176	- - "RNAmicro=f:13430050_t:13430144_strand:+_p:0.673740" - - - - - -	6549	13,430,050 – 13,430,145	+	6	95	83.47	-3.00	0.71	0.846297
				6550	13,430,050 – 13,430,145	-	6	95	83.47	-2.41	0.70	0.718492
				6551	13,430,071 – 13,430,176	-	6	105	86.93	-2.21	0.79	0.618805
4067	2R_DroMel_CAF1	13,435,700 – 13,435,805	- - - - - - - - -	6552	13,435,700 – 13,435,805	-	5	107	73.88	-1.09	0.81	0.935024
4068	2R_DroMel_CAF1	13,437,531 – 13,437,623	- - - - - - - - -	6553	13,437,531 – 13,437,623	+	5	95	93.34	-1.52	0.86	0.864512
4069	2R_DroMel_CAF1	13,440,731 – 13,440,822	- - - - - - - - -	6554	13,440,731 – 13,440,822	-	5	102	74.11	-1.72	0.19	0.784259
4070	2R_DroMel_CAF1	13,444,075 – 13,444,173	- - - - - - - - -	6555	13,444,075 – 13,444,173	-	5	102	71.16	-2.00	0.63	0.985257
4071	2R_DroMel_CAF1	13,444,478 – 13,444,575	- - - - - - - - -	6556	13,444,478 – 13,444,575	-	5	108	79.28	-1.81	0.53	0.500000
4072	2R_DroMel_CAF1	13,444,844 – 13,444,937	- - - - - - - - -	6557	13,444,844 – 13,444,937	+	5	93	89.76	-2.71	0.92	0.999834
4072	2R_DroMel_CAF1	13,444,844 – 13,444,937	- - - - - - - - -	6558	13,444,844 – 13,444,937	-	5	93	89.76	-2.47	0.94	0.999710
4073	2R_DroMel_CAF1	13,448,696 – 13,448,786	- - - - - - - - -	6559	13,448,696 – 13,448,786	-	5	90	80.33	-1.64	0.64	0.534953
4074	2R_DroMel_CAF1	13,451,195 – 13,451,285	- - - - - - - - -	6560	13,451,195 – 13,451,285	-	3	101	80.27	-1.95	0.74	0.893244
4075	2R_DroMel_CAF1	13,452,670 – 13,452,791	- - - - - - - - -	6561	13,452,670 – 13,452,770	-	6	120	87.59	-2.46	0.79	0.681425
				6562	13,452,693 – 13,452,791	+	6	120	86.02	-2.29	0.86	0.921412
				6563	13,452,693 – 13,452,791	-	6	120	86.02	-2.93	0.92	0.995300
4076	2R_DroMel_CAF1	13,453,808 – 13,453,919	- - - - - - - - -	6564	13,453,808 – 13,453,919	-	5	117	90.51	-1.58	0.75	0.550093
4077	2R_DroMel_CAF1	13,454,190 – 13,454,302	- - - - - - - - -	6565	13,454,190 – 13,454,302	+	6	120	93.02	-1.90	0.83	0.642473
4078	2R_DroMel_CAF1	13,454,368 – 13,454,473	- - - - - - - - -	6566	13,454,368 – 13,454,473	-	6	120	85.32	-2.83	0.70	0.599247
4079	2R_DroMel_CAF1	13,454,606 – 13,454,845	- - - - - - - - -	6567	13,454,606 – 13,454,725	-	5	120	83.65	-2.61	0.58	0.845306
4079	2R_DroMel_CAF1	13,454,606 – 13,454,845	- - - - - - - - -	6568	13,454,725 – 13,454,845	-	6	120	81.17	-1.86	0.69	0.781981
4080	2R_DroMel_CAF1	13,455,197 – 13,455,406	- - - - - - - - -	6569	13,455,197 – 13,455,296	-	4	99	95.45	-2.38	0.90	0.952806
4080	2R_DroMel_CAF1	13,455,197 – 13,455,406	- - - - - - - - -	6570	13,455,296 – 13,455,406	+	4	110	91.36	-1.95	0.85	0.886345
4081	2R_DroMel_CAF1	13,456,140 – 13,456,233	- - - - - - - - -	6571	13,456,140 – 13,456,233	+	6	106	89.04	-1.41	0.88	0.603332
4082	2R_DroMel_CAF1	13,460,101 – 13,460,194	- - - - - - - - -	6572	13,460,101 – 13,460,194	-	6	120	80.97	-2.13	0.61	0.776055
4083	2R_DroMel_CAF1	13,460,901 – 13,461,007	- - - - - - - - -	6573	13,460,901 – 13,461,007	-	6	107	83.57	-2.69	0.58	0.541610
4084	2R_DroMel_CAF1	13,461,469 – 13,461,563	- - - - - - - - -	6574	13,461,469 – 13,461,563	+	5	103	82.13	-2.18	0.55	0.683732
4084	2R_DroMel_CAF1	13,461,469 – 13,461,563	- - - - - - - - -	6575	13,461,469 – 13,461,563	-	5	103	82.13	-2.46	0.56	0.871640
4085	2R_DroMel_CAF1	13,462,001 – 13,462,209	- - - - - - - - -	6576	13,462,001 – 13,462,095	-	5	96	88.09	-1.76	0.86	0.912221
4085	2R_DroMel_CAF1	13,462,001 – 13,462,209	- - - - - - - - -	6577	13,462,095 – 13,462,209	-	6	120	81.51	-1.30	0.68	0.500000
4086	2R_DroMel_CAF1	13,462,305 – 13,462,410	- - - - - - - - -	6578	13,462,305 – 13,462,410	+	6	120	86.50	-2.84	0.81	0.890441
4086	2R_DroMel_CAF1	13,462,305 – 13,462,410	- - - - - - - - -	6579	13,462,305 – 13,462,410	-	6	120	86.50	-2.93	0.72	0.600334
4087	2R_DroMel_CAF1	13,462,511 – 13,462,616	- - - - - - - - -	6580	13,462,511 – 13,462,616	+	5	120	79.42	-2.59	0.75	0.992874
4087	2R_DroMel_CAF1	13,462,511 – 13,462,616	- - - - - - - - -	6581	13,462,511 – 13,462,616	-	5	120	79.42	-2.07	0.76	0.952280
4088	2R_DroMel_CAF1	13,462,891 – 13,462,985	- - - - - - - - -	6582	13,462,891 – 13,462,985	+	6	120	79.16	-2.00	0.56	0.766436
4089	2R_DroMel_CAF1	13,463,934 – 13,464,046	- - - - - - - - -	6583	13,463,934 – 13,464,046	-	5	112	87.54	-1.67	0.76	0.666225
4090	2R_DroMel_CAF1	13,475,841 – 13,475,936	- - - - - - - - -	6584	13,475,841 – 13,475,936	+	5	105	87.44	-1.79	0.81	0.833947
4090	2R_DroMel_CAF1	13,475,841 – 13,475,936	- - - - - - - - -	6585	13,475,841 – 13,475,936	-	5	105	87.44	-1.73	0.83	0.846521
4091	2R_DroMel_CAF1	13,480,815 – 13,480,920	- - - - - - - - -	6586	13,480,815 – 13,480,920	+	6	111	88.52	-2.50	0.77	0.545780
4091	2R_DroMel_CAF1	13,480,815 – 13,480,920	- - - - - - - - -	6587	13,480,815 – 13,480,920	-	6	111	88.52	-3.37	0.72	0.582025
4092	2R_DroMel_CAF1	13,482,531 – 13,482,668	- - - - - - - - -	6588	13,482,531 – 13,482,634	+	6	118	84.45	-2.88	0.61	0.509532
				6589	13,482,531 – 13,482,634	-	6	118	84.45	-2.44	0.66	0.500000
				6590	13,482,561 – 13,482,668	-	6	120	82.50	-2.07	0.62	0.604994
4093	2R_DroMel_CAF1	13,485,801 – 13,485,900	- - - - - - - - -	6591	13,485,801 – 13,485,900	+	6	120	81.06	-1.70	0.61	0.572558
4093	2R_DroMel_CAF1	13,485,801 – 13,485,900	- - - - - - - - -	6592	13,485,801 – 13,485,900	-	6	120	81.06	-2.45	0.53	0.731153
4094	2R_DroMel_CAF1	13,485,907 – 13,486,053	- - - - - - - - -	6593	13,485,907 – 13,486,018	+	4	120	85.57	-2.20	0.63	0.739718
4094	2R_DroMel_CAF1	13,485,907 – 13,486,053	- - - - - - - - -	6594	13,485,942 – 13,486,053	-	5	118	71.90	-1.73	0.20	0.723695
4095	2R_DroMel_CAF1	13,486,507 – 13,486,636	- - - - - - - - -	6595	13,486,507 – 13,486,600	-	6	97	78.28	-2.63	0.35	0.624420
4095	2R_DroMel_CAF1	13,486,507 – 13,486,636	- - - - - - - - -	6596	13,486,538 – 13,486,636	-	6	101	82.76	-1.88	0.72	0.685391
4096	2R_DroMel_CAF1	13,489,189 – 13,489,444	- - - - - - - - -	6597	13,489,189 – 13,489,288	-	4	107	91.21	-2.06	0.75	0.736836
				6598	13,489,217 – 13,489,320	-	5	119	89.60	-1.56	0.76	0.572249
				6599	13,489,320 – 13,489,416	+	6	112	79.82	-1.17	0.70	0.559642
				6600	13,489,347 – 13,489,444	+	6	112	81.11	-2.35	0.51	0.583433
4097	2R_DroMel_CAF1	13,490,369 – 13,490,462	- - - - - - - - -	6601	13,490,369 – 13,490,462	+	5	93	89.14	-1.51	0.80	0.657178
4098	2R_DroMel_CAF1	13,490,714 – 13,490,807	- - - - - - - - -	6602	13,490,714 – 13,490,807	+	5	95	89.45	-1.54	0.77	0.581978
4098	2R_DroMel_CAF1	13,490,714 – 13,490,807	- - - - - - - - -	6603	13,490,714 – 13,490,807	-	5	95	89.45	-2.69	0.73	0.930277
4099	2R_DroMel_CAF1	13,491,669 – 13,491,831	- - - - - - - - -	6604	13,491,669 – 13,491,768	-	6	115	81.43	-1.82	0.69	0.746617
				6605	13,491,704 – 13,491,808	+	6	118	77.82	-1.30	0.65	0.601900
				6606	13,491,730 – 13,491,831	+	6	117	80.04	-1.16	0.86	0.626251
4100	2R_DroMel_CAF1	13,493,639 – 13,493,771	- - - "knownCDS=Parent=FBtr0100051;Name=dpr13-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33996-RA" - - - - -	6607	13,493,639 – 13,493,740	+	6	120	77.57	-0.86	0.76	0.552854
4100	2R_DroMel_CAF1	13,493,639 – 13,493,771		6608	13,493,660 – 13,493,771	+	6	120	82.35	-1.59	0.68	0.562690
4101	2R_DroMel_CAF1	13,494,335 – 13,494,430	- - - "knownCDS=texon1533;Parent=CG_NCBI_GNO_32494544, CG_RGUI_GID_mRNA_40003762, CG_DGIL_SNO_28356998, CG_BATZ_CON_47004434" - - - - -	6609	13,494,335 – 13,494,430	+	6	118	78.31	-1.66	0.67	0.855725
4102	2R_DroMel_CAF1	13,495,232 – 13,495,337	- - - - - - - - -	6610	13,495,232 – 13,495,337	-	6	117	79.84	-2.36	0.50	0.754451
4103	2R_DroMel_CAF1	13,497,977 – 13,498,072	- - - - - - - - -	6611	13,497,977 – 13,498,072	+	6	95	90.25	-2.92	0.75	0.545647
4103	2R_DroMel_CAF1	13,497,977 – 13,498,072	- - - - - - - - -	6612	13,497,977 – 13,498,072	-	6	95	90.25	-2.57	0.83	0.903309
4104	2R_DroMel_CAF1	13,500,886 – 13,500,995	- - - - - - - - -	6613	13,500,886 – 13,500,995	+	6	117	83.02	-2.22	0.72	0.749850
4105	2R_DroMel_CAF1	13,503,436 – 13,503,527	- - - - - - - - -	6614	13,503,436 – 13,503,527	-	6	95	81.54	-1.96	0.60	0.626478
4106	2R_DroMel_CAF1	13,504,507 – 13,504,607	- - - "knownCDS=Parent=FBtr0100051;Name=dpr13-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33996-RA" - - - - -	6615	13,504,507 – 13,504,607	+	6	114	76.53	-1.81	0.63	0.917315
4107	2R_DroMel_CAF1	13,505,642 – 13,505,738	- - - - - - - - -	6616	13,505,642 – 13,505,738	-	6	108	82.61	-1.68	0.70	0.609143
4108	2R_DroMel_CAF1	13,506,510 – 13,506,615	- - - - - - - - -	6617	13,506,510 – 13,506,615	+	5	106	80.17	-3.22	0.59	0.996986
4108	2R_DroMel_CAF1	13,506,510 – 13,506,615	- - - - - - - - -	6618	13,506,510 – 13,506,615	-	5	106	80.17	-3.25	0.67	0.998195
4109	2R_DroMel_CAF1	13,508,759 – 13,508,857	- - - - - - - - -	6619	13,508,759 – 13,508,857	+	6	114	78.29	-1.28	0.68	0.681321
4110	2R_DroMel_CAF1	13,515,411 – 13,515,504	- - - - - - - - -	6620	13,515,411 – 13,515,504	-	6	116	76.83	-2.32	0.53	0.945637
4111	2R_DroMel_CAF1	13,515,873 – 13,515,976	- - - - - - - - -	6621	13,515,873 – 13,515,976	+	4	103	78.27	-1.88	0.56	0.521187
4111	2R_DroMel_CAF1	13,515,873 – 13,515,976	- - - - - - - - -	6622	13,515,873 – 13,515,976	-	4	103	78.27	-3.05	0.65	0.999077
4112	2R_DroMel_CAF1	13,516,052 – 13,516,155	- - - - - - - - -	6623	13,516,052 – 13,516,155	+	6	119	84.78	-2.40	0.78	0.779682
4113	2R_DroMel_CAF1	13,518,003 – 13,518,115	- - - - - - - - -	6624	13,518,003 – 13,518,115	-	6	113	82.03	-2.43	0.80	0.913216
4114	2R_DroMel_CAF1	13,523,561 – 13,523,659	- - - - - - - - -	6625	13,523,561 – 13,523,659	+	6	108	82.76	-1.77	0.67	0.576538
4115	2R_DroMel_CAF1	13,524,407 – 13,524,508	- - - - - - - - -	6626	13,524,407 – 13,524,508	-	6	101	90.03	-2.29	0.92	0.994914
4116	2R_DroMel_CAF1	13,526,234 – 13,526,336	- - - - - - - - -	6627	13,526,234 – 13,526,336	-	6	106	78.36	-1.81	0.56	0.695826
4117	2R_DroMel_CAF1	13,527,919 – 13,528,029	- - - - - - - - -	6628	13,527,919 – 13,528,029	+	5	110	93.09	-2.27	0.79	0.950467
4117	2R_DroMel_CAF1	13,527,919 – 13,528,029	- - - - - - - - -	6629	13,527,919 – 13,528,029	-	5	110	93.09	-2.18	0.83	0.983391
4118	2R_DroMel_CAF1	13,529,681 – 13,529,814	- - - - - - - - -	6630	13,529,681 – 13,529,774	-	6	101	87.65	-2.08	0.89	0.941833
				6631	13,529,707 – 13,529,814	+	6	115	87.77	-3.54	0.88	0.996631
				6632	13,529,707 – 13,529,814	-	6	115	87.77	-2.29	0.85	0.906566
4119	2R_DroMel_CAF1	13,535,112 – 13,535,224	- - - "knownCDS=Parent=FBtr0089630;Name=CG10910-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10910-RB" - - - - -	6633	13,535,112 – 13,535,224	-	6	114	78.48	-1.26	0.68	0.648599
4120	2R_DroMel_CAF1	13,535,736 – 13,535,838	- - - "knownCDS=Parent=FBtr0089630;Name=CG10910-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10910-RB" - - - - -	6634	13,535,736 – 13,535,838	-	6	102	82.22	-1.64	0.71	0.632752
4121	2R_DroMel_CAF1	13,535,937 – 13,536,075	- - - "knownCDS=Parent=FBtr0089630;Name=CG10910-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10910-RB" - - - - -	6635	13,535,937 – 13,536,035	+	5	98	74.59	-2.16	0.49	0.957036
4121	2R_DroMel_CAF1	13,535,937 – 13,536,075		6636	13,535,955 – 13,536,075	+	6	120	70.47	-2.17	0.37	0.916415
4122	2R_DroMel_CAF1	13,536,517 – 13,536,671	- - - "knownCDS=Parent=FBtr0089630;Name=CG10910-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10910-RB" - - - - -	6637	13,536,517 – 13,536,611	+	6	99	71.44	-1.84	0.43	0.723555
4122	2R_DroMel_CAF1	13,536,517 – 13,536,671		6638	13,536,579 – 13,536,671	+	6	95	70.69	-1.81	0.39	0.616562
4123	2R_DroMel_CAF1	13,536,708 – 13,536,800	- - - "knownCDS=Parent=FBtr0089630;Name=CG10910-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10910-RB" - - - - -	6639	13,536,708 – 13,536,800	+	5	92	83.59	-2.23	0.64	0.817885
4124	2R_DroMel_CAF1	13,539,516 – 13,539,655	- - - - - - - - -	6640	13,539,516 – 13,539,616	-	6	115	89.08	-1.83	0.86	0.763121
4124	2R_DroMel_CAF1	13,539,516 – 13,539,655	- - - - - - - - -	6641	13,539,554 – 13,539,655	-	3	103	92.83	-1.51	0.95	0.626201
4125	2R_DroMel_CAF1	13,543,166 – 13,543,314	- - - - - - - - -	6642	13,543,166 – 13,543,274	+	3	113	90.48	-3.07	0.89	0.974145
				6643	13,543,166 – 13,543,274	-	3	113	90.48	-3.65	0.96	0.994619
				6644	13,543,205 – 13,543,314	+	3	114	89.68	-3.67	0.83	0.958760
				6645	13,543,205 – 13,543,314	-	3	114	89.68	-4.06	0.90	0.981320
4126	2R_DroMel_CAF1	13,545,360 – 13,545,457	- - - - - - - - -	6646	13,545,360 – 13,545,457	+	6	105	80.85	-1.84	0.56	0.500000
4127	2R_DroMel_CAF1	13,552,841 – 13,552,940	- - - - - - - - -	6647	13,552,841 – 13,552,940	-	6	112	79.99	-1.19	0.76	0.637275
4128	2R_DroMel_CAF1	13,559,581 – 13,559,701	- - - "knownCDS=Parent=FBtr0086812;Name=CG5770-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5770-RA" - - - - -	6648	13,559,581 – 13,559,701	+	5	120	92.00	-1.58	0.80	0.717620
4129	2R_DroMel_CAF1	13,571,945 – 13,572,037	- - - - - - - - -	6649	13,571,945 – 13,572,037	-	6	116	71.53	-2.78	0.42	0.996402
4130	2R_DroMel_CAF1	13,575,195 – 13,575,328	- - - - - - - - -	6650	13,575,195 – 13,575,293	-	6	111	73.59	-2.06	0.51	0.940060
4130	2R_DroMel_CAF1	13,575,195 – 13,575,328	- - - - - - - - -	6651	13,575,226 – 13,575,328	+	6	120	74.02	-1.68	0.59	0.878794
4131	2R_DroMel_CAF1	13,578,894 – 13,578,987	- - - - - - - - -	6652	13,578,894 – 13,578,987	-	5	100	82.57	-1.75	0.68	0.636921
4132	2R_DroMel_CAF1	13,579,149 – 13,579,250	- - - - - - - - -	6653	13,579,149 – 13,579,250	+	6	120	81.36	-2.05	0.56	0.574735
4133	2R_DroMel_CAF1	13,579,690 – 13,579,861	- - - - - - - - -	6654	13,579,690 – 13,579,799	+	4	109	87.92	-2.91	0.91	0.996693
				6655	13,579,721 – 13,579,838	+	4	117	89.17	-2.59	0.85	0.983433
				6656	13,579,721 – 13,579,838	-	4	117	89.17	-2.14	0.75	0.842084
				6657	13,579,760 – 13,579,861	+	6	104	83.20	-1.81	0.69	0.574486
4134	2R_DroMel_CAF1	13,584,183 – 13,584,277	- - - - - - - - -	6658	13,584,183 – 13,584,277	-	6	112	88.73	-1.59	0.88	0.718285
4135	2R_DroMel_CAF1	13,587,006 – 13,587,104	- - - - - - - - -	6659	13,587,006 – 13,587,104	-	6	104	89.92	-2.52	0.94	0.998835
4136	2R_DroMel_CAF1	13,590,339 – 13,590,434	- - - - - - - - -	6660	13,590,339 – 13,590,434	-	4	95	94.52	-1.78	0.84	0.658166
4137	2R_DroMel_CAF1	13,593,130 – 13,593,225	- - - - - - - - -	6661	13,593,130 – 13,593,225	-	3	95	82.01	-1.56	0.71	0.512264
4138	2R_DroMel_CAF1	13,600,121 – 13,600,212	- - - - - - - - -	6662	13,600,121 – 13,600,212	+	6	100	82.62	-1.90	0.67	0.631428
4138	2R_DroMel_CAF1	13,600,121 – 13,600,212	- - - - - - - - -	6663	13,600,121 – 13,600,212	-	6	100	82.62	-1.86	0.72	0.695715
4139	2R_DroMel_CAF1	13,601,271 – 13,601,363	- - - - - - - - -	6664	13,601,271 – 13,601,363	+	6	111	90.10	-1.21	0.93	0.720307
4140	2R_DroMel_CAF1	13,606,878 – 13,606,985	- - - - - - - - -	6665	13,606,878 – 13,606,972	+	6	120	77.87	-2.35	0.52	0.919076
4140	2R_DroMel_CAF1	13,606,878 – 13,606,985	- - - - - - - - -	6666	13,606,895 – 13,606,985	+	6	101	81.84	-1.46	0.68	0.546843
4141	2R_DroMel_CAF1	13,607,861 – 13,607,951	- - - "knownCDS=Parent=FBtr0086731;Name=CG14497-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14497-RA" - - - - -	6667	13,607,861 – 13,607,951	+	6	90	88.88	-1.43	0.89	0.672569
4142	2R_DroMel_CAF1	13,613,417 – 13,613,510	- - - "knownCDS=Parent=FBtr0086732;Name=CG5098-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5098-RA" - - - - -	6668	13,613,417 – 13,613,510	-	6	96	82.41	-1.26	0.78	0.500000
4143	2R_DroMel_CAF1	13,631,496 – 13,631,593	- - - - - - - - -	6669	13,631,496 – 13,631,593	+	5	100	81.24	-3.13	0.60	0.993057
4144	2R_DroMel_CAF1	13,633,984 – 13,634,074	- - - - - - - - -	6670	13,633,984 – 13,634,074	+	6	117	77.16	-1.38	0.63	0.646024
4145	2R_DroMel_CAF1	13,635,169 – 13,635,266	- - - "knownCDS=Parent=FBtr0086783;Name=stau-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5753-RA" - - - - -	6671	13,635,169 – 13,635,266	-	6	100	79.52	-3.63	0.41	0.966497
4146	2R_DroMel_CAF1	13,639,235 – 13,639,343	- - - - - - - - -	6672	13,639,235 – 13,639,343	+	5	120	77.13	-2.05	0.38	0.809657
4147	2R_DroMel_CAF1	13,640,996 – 13,641,142	- - - - - - - - -	6673	13,640,996 – 13,641,087	-	6	116	63.11	-1.65	0.42	0.772163
4147	2R_DroMel_CAF1	13,640,996 – 13,641,142	- - - - - - - - -	6674	13,641,048 – 13,641,142	-	6	95	76.12	-1.35	0.61	0.582507
4148	2R_DroMel_CAF1	13,642,189 – 13,642,288	- - - - - - - - -	6675	13,642,189 – 13,642,288	-	4	112	70.86	-1.55	0.65	0.858078
4149	2R_DroMel_CAF1	13,652,432 – 13,652,527	- - - "knownCDS=Parent=FBtr0086735;Name=Pcl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5109-RA" - - - - -	6676	13,652,432 – 13,652,527	+	6	102	75.85	-1.16	0.65	0.561681
4150	2R_DroMel_CAF1	13,657,662 – 13,657,758	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002444; Name=psi18S-1347a;Dbxref=FB:FBgn0083054, GB:AJ629271" - - - - - - - -	6677	13,657,662 – 13,657,758	+	6	99	76.84	-1.87	0.55	0.788894
4151	2R_DroMel_CAF1	13,657,839 – 13,657,932	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002445; Name=psi18S-1347b;Dbxref=FB:FBgn0083053, GB:AJ629272" - - - - - - - -	6678	13,657,839 – 13,657,932	+	6	98	72.58	-2.76	0.68	0.995912
4152	2R_DroMel_CAF1	13,659,531 – 13,659,633	- - "RNAmicro=f:13659531_t:13659644_strand:+_p:0.879211" "knownCDS=Parent=FBtr0086736, FBtr0086737, FBtr0086738, FBtr0086739, FBtr0086740, FBtr0086741, FBtr0086742, FBtr0086743;Name=pAbp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5119-RC, FlyBase+Annotation+IDs:CG5119-RE, FlyBase+Annotation+IDs:CG5119-RA, FlyBase+Annotation+IDs:CG5119-RF, FlyBase+Annotation+IDs:CG5119-RB, FlyBase+Annotation+IDs:CG5119-RD, FlyBase+Annotation+IDs:CG5119-RG, FlyBase+Annotation+IDs:CG5119-RH" - - - - -	6679	13,659,531 – 13,659,633	-	6	114	78.27	-1.18	0.66	0.521295
4153	2R_DroMel_CAF1	13,659,797 – 13,659,901	- - - - - - - - -	6680	13,659,797 – 13,659,901	+	6	109	75.86	-1.35	0.64	0.700266
4153	2R_DroMel_CAF1	13,659,797 – 13,659,901	- - - - - - - - -	6681	13,659,797 – 13,659,901	-	6	109	75.86	-1.19	0.69	0.749409
4154	2R_DroMel_CAF1	13,664,858 – 13,664,972	- - - "knownCDS=Parent=FBtr0086780;Name=CG5742-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5742-RA" - - - - -	6682	13,664,858 – 13,664,972	+	6	120	76.98	-1.72	0.63	0.868616
4155	2R_DroMel_CAF1	13,670,274 – 13,670,378	- - - "knownCDS=Parent=FBtr0086776, FBtr0086778, FBtr0086779;Name=lolal-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5738-RB, FlyBase+Annotation+IDs:CG5738-RC, FlyBase+Annotation+IDs:CG5738-RD" - - - - -	6683	13,670,274 – 13,670,378	-	6	120	78.22	-1.12	0.72	0.656331
4156	2R_DroMel_CAF1	13,670,743 – 13,670,833	- - - "knownCDS=Parent=FBtr0086777;Name=lolal-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5738-RA" - - - - -	6684	13,670,743 – 13,670,833	+	6	94	89.66	-1.68	0.94	0.966978
4157	2R_DroMel_CAF1	13,675,612 – 13,675,710	- - - - - - - - -	6685	13,675,612 – 13,675,710	+	6	106	80.16	-2.18	0.50	0.572076
4157	2R_DroMel_CAF1	13,675,612 – 13,675,710	- - - - - - - - -	6686	13,675,612 – 13,675,710	-	6	106	80.16	-1.64	0.58	0.507362
4158	2R_DroMel_CAF1	13,677,142 – 13,677,237	- - - - - - - - -	6687	13,677,142 – 13,677,237	-	6	100	78.82	-1.65	0.62	0.718698
4159	2R_DroMel_CAF1	13,678,215 – 13,678,350	- - - "knownCDS=Parent=FBtr0086746;Name=CG10915-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10915-RA" - - - - -	6688	13,678,215 – 13,678,335	+	6	120	83.33	-1.79	0.68	0.534546
				6689	13,678,215 – 13,678,335	-	6	120	83.33	-2.65	0.69	0.775591
				6690	13,678,255 – 13,678,350	+	6	110	80.73	-2.25	0.56	0.738840
				6691	13,678,255 – 13,678,350	-	6	110	80.73	-1.83	0.64	0.730147
4160	2R_DroMel_CAF1	13,682,740 – 13,682,851	- - - - - - - - -	6692	13,682,740 – 13,682,851	+	6	117	80.32	-1.34	0.70	0.638534
4161	2R_DroMel_CAF1	13,685,879 – 13,685,990	- - - "knownCDS=Parent=FBtr0086773;Name=Dgp-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5729-RA" - - - - -	6693	13,685,879 – 13,685,990	+	6	111	77.66	-2.05	0.48	0.650708
4162	2R_DroMel_CAF1	13,687,014 – 13,687,143	- - - - - - - - -	6694	13,687,014 – 13,687,114	+	5	106	75.68	-2.94	0.51	0.999089
				6695	13,687,014 – 13,687,114	-	5	106	75.68	-3.64	0.62	0.999865
				6696	13,687,038 – 13,687,143	-	6	116	71.91	-2.18	0.35	0.856588
4163	2R_DroMel_CAF1	13,689,217 – 13,689,337	- - - "knownCDS=Parent=FBtr0086749;Name=CG10916-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10916-RA" - - - - -	6697	13,689,217 – 13,689,337	+	6	120	82.67	-1.29	0.82	0.514241
4164	2R_DroMel_CAF1	13,692,662 – 13,692,775	- - - "knownCDS=Parent=FBtr0086772;Name=CG5726-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5726-RA" - - - - -	6698	13,692,662 – 13,692,775	-	5	119	87.43	-1.93	0.77	0.844610
4165	2R_DroMel_CAF1	13,695,014 – 13,695,124	- - - - - - - - -	6699	13,695,014 – 13,695,124	+	3	112	66.87	-3.84	0.65	1.000000
4165	2R_DroMel_CAF1	13,695,014 – 13,695,124	- - - - - - - - -	6700	13,695,014 – 13,695,124	-	3	112	66.87	-4.12	0.57	0.999998
4166	2R_DroMel_CAF1	13,695,813 – 13,695,933	- - - "knownCDS=Parent=FBtr0086750;Name=CG5140-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5140-RA" - - - - -	6701	13,695,813 – 13,695,933	-	6	120	78.22	-2.03	0.48	0.580849
4167	2R_DroMel_CAF1	13,706,980 – 13,707,071	- - - - - - - - -	6702	13,706,980 – 13,707,071	-	5	91	87.98	-2.22	0.75	0.900042
4168	2R_DroMel_CAF1	13,712,539 – 13,712,632	- - - - - - - - -	6703	13,712,539 – 13,712,632	+	6	108	78.64	-1.22	0.70	0.654878
4169	2R_DroMel_CAF1	13,718,359 – 13,718,482	- - - - - - - - -	6704	13,718,359 – 13,718,449	+	5	91	91.42	-1.65	0.81	0.831222
				6705	13,718,359 – 13,718,449	-	5	91	91.42	-1.65	0.75	0.574853
				6706	13,718,375 – 13,718,482	+	4	108	91.71	-2.87	0.84	0.976573
4170	2R_DroMel_CAF1	13,725,595 – 13,725,691	- - - - - - - - -	6707	13,725,595 – 13,725,691	-	6	112	86.78	-2.38	0.87	0.942244
4171	2R_DroMel_CAF1	13,728,769 – 13,728,880	- - - - - - - - -	6708	13,728,769 – 13,728,880	-	5	112	95.24	-1.22	0.95	0.808929
4172	2R_DroMel_CAF1	13,731,728 – 13,731,829	- - - - - - - - -	6709	13,731,728 – 13,731,829	+	6	120	81.89	-2.02	0.71	0.787570
4173	2R_DroMel_CAF1	13,731,971 – 13,732,087	- - - - - - - - -	6710	13,731,971 – 13,732,087	+	6	120	80.41	-1.80	0.70	0.819291
4174	2R_DroMel_CAF1	13,734,241 – 13,734,331	- - - - - - - - -	6711	13,734,241 – 13,734,331	+	6	90	81.77	-1.61	0.75	0.712343
4175	2R_DroMel_CAF1	13,739,305 – 13,739,431	- - - - - - - - -	6712	13,739,305 – 13,739,411	-	6	120	82.62	-1.48	0.70	0.527497
4175	2R_DroMel_CAF1	13,739,305 – 13,739,431	- - - - - - - - -	6713	13,739,331 – 13,739,431	-	6	120	80.50	-1.84	0.63	0.734549
4176	2R_DroMel_CAF1	13,739,855 – 13,739,985	- - - - - - - - -	6714	13,739,855 – 13,739,965	+	5	114	77.97	-1.80	0.53	0.574079
4176	2R_DroMel_CAF1	13,739,855 – 13,739,985	- - - - - - - - -	6715	13,739,889 – 13,739,985	-	6	100	79.15	-1.27	0.65	0.534075
4177	2R_DroMel_CAF1	13,740,218 – 13,740,321	- - - - - - - - -	6716	13,740,218 – 13,740,321	-	6	110	79.62	-1.49	0.64	0.646447
4178	2R_DroMel_CAF1	13,744,858 – 13,744,961	- - - - - - - - -	6717	13,744,858 – 13,744,961	+	6	119	77.72	-1.56	0.61	0.687709
4178	2R_DroMel_CAF1	13,744,858 – 13,744,961	- - - - - - - - -	6718	13,744,858 – 13,744,961	-	6	119	77.72	-1.23	0.72	0.747751
4179	2R_DroMel_CAF1	13,745,419 – 13,745,522	- - - - - - - - -	6719	13,745,419 – 13,745,522	+	5	106	92.66	-1.80	0.83	0.942051
4180	2R_DroMel_CAF1	13,752,104 – 13,752,239	- - - - - - - - -	6720	13,752,104 – 13,752,210	+	6	118	80.54	-1.56	0.70	0.738692
4180	2R_DroMel_CAF1	13,752,104 – 13,752,239	- - - - - - - - -	6721	13,752,135 – 13,752,239	+	6	116	76.12	-1.50	0.64	0.815193
4181	2R_DroMel_CAF1	13,767,965 – 13,768,062	- - - - - - - - -	6722	13,767,965 – 13,768,062	+	6	107	79.58	-1.56	0.59	0.513339
4182	2R_DroMel_CAF1	13,769,030 – 13,769,161	- - - - - - - - -	6723	13,769,030 – 13,769,146	+	5	117	90.66	-1.93	0.77	0.853751
				6724	13,769,030 – 13,769,146	-	5	117	90.66	-1.82	0.72	0.567654
				6725	13,769,067 – 13,769,161	+	4	120	81.21	-2.06	0.64	0.839470
				6726	13,769,067 – 13,769,161	-	4	120	81.21	-1.74	0.68	0.679216
4183	2R_DroMel_CAF1	13,769,976 – 13,770,078	- - - - - - - - -	6727	13,769,976 – 13,770,078	+	6	120	74.37	-1.73	0.47	0.505911
4184	2R_DroMel_CAF1	13,779,222 – 13,779,326	- - - - - - - - -	6728	13,779,222 – 13,779,326	-	6	120	81.82	-1.51	0.66	0.547640
4185	2R_DroMel_CAF1	13,780,442 – 13,780,544	- - - - - - - - -	6729	13,780,442 – 13,780,544	+	5	111	76.62	-1.47	0.72	0.773113
4185	2R_DroMel_CAF1	13,780,442 – 13,780,544	- - - - - - - - -	6730	13,780,442 – 13,780,544	-	5	111	76.62	-2.21	0.70	0.985997
4186	2R_DroMel_CAF1	13,790,763 – 13,790,867	- - - "knownCDS=Parent=FBtr0086768;Name=Ote-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5581-RA" - - - - -	6731	13,790,763 – 13,790,867	+	6	104	78.01	-1.75	0.68	0.898152
4186	2R_DroMel_CAF1	13,790,763 – 13,790,867		6732	13,790,763 – 13,790,867	-	6	104	78.01	-1.41	0.65	0.699220
4187	2R_DroMel_CAF1	13,791,409 – 13,791,502	- - - "knownCDS=Parent=FBtr0086768;Name=Ote-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5581-RA" - - - - -	6733	13,791,409 – 13,791,502	+	6	105	78.18	-1.25	0.64	0.526165
4188	2R_DroMel_CAF1	13,795,209 – 13,795,370	- - - "knownCDS=Parent=FBtr0086765;Name=sbb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5580-RA" - - - - -	6734	13,795,209 – 13,795,301	+	6	92	79.35	-2.03	0.50	0.547650
4188	2R_DroMel_CAF1	13,795,209 – 13,795,370		6735	13,795,268 – 13,795,370	+	6	108	75.34	-1.49	0.56	0.521827
4189	2R_DroMel_CAF1	13,796,249 – 13,796,339	- - - "knownCDS=Parent=FBtr0086765;Name=sbb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5580-RA" - - - - -	6736	13,796,249 – 13,796,339	+	6	108	83.12	-1.57	0.71	0.528472
4190	2R_DroMel_CAF1	13,796,675 – 13,796,791	- - - "knownCDS=Parent=FBtr0086765;Name=sbb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5580-RA" - - - - -	6737	13,796,675 – 13,796,791	+	6	118	74.47	-1.93	0.47	0.773042
4191	2R_DroMel_CAF1	13,797,114 – 13,797,234	- - - "knownCDS=Parent=FBtr0086765;Name=sbb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5580-RA" - - - - -	6738	13,797,114 – 13,797,234	+	6	120	81.11	-2.08	0.56	0.603298
4191	2R_DroMel_CAF1	13,797,114 – 13,797,234		6739	13,797,114 – 13,797,234	-	6	120	81.11	-2.43	0.52	0.688215
4192	2R_DroMel_CAF1	13,797,656 – 13,797,767	- - - "knownCDS=Parent=FBtr0086765;Name=sbb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5580-RA" - - - - -	6740	13,797,656 – 13,797,767	-	6	117	75.42	-2.46	0.30	0.695465
4193	2R_DroMel_CAF1	13,799,019 – 13,799,216	- - - "knownCDS=Parent=FBtr0086765;Name=sbb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5580-RA" - - - - -	6741	13,799,019 – 13,799,136	+	6	120	76.09	-2.17	0.73	0.982405
				6742	13,799,019 – 13,799,136	-	6	120	76.09	-2.23	0.62	0.977054
				6743	13,799,059 – 13,799,176	+	6	120	80.62	-1.39	0.71	0.652780
				6744	13,799,099 – 13,799,216	-	6	120	78.76	-1.77	0.61	0.769944
4194	2R_DroMel_CAF1	13,799,414 – 13,799,548	- - - - - - - - -	6745	13,799,414 – 13,799,508	+	6	97	66.33	-1.65	0.54	0.900271
4194	2R_DroMel_CAF1	13,799,414 – 13,799,548	- - - - - - - - -	6746	13,799,433 – 13,799,548	-	6	115	76.63	-0.88	0.81	0.709802
4195	2R_DroMel_CAF1	13,800,707 – 13,800,803	- - - "knownCDS=Parent=FBtr0086765;Name=sbb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5580-RA" - - - - -	6747	13,800,707 – 13,800,803	-	6	96	77.43	-2.16	0.43	0.602733
4196	2R_DroMel_CAF1	13,804,666 – 13,804,761	- - - - - - - - -	6748	13,804,666 – 13,804,761	+	6	107	74.42	-1.57	0.60	0.823723
4196	2R_DroMel_CAF1	13,804,666 – 13,804,761	- - - - - - - - -	6749	13,804,666 – 13,804,761	-	6	107	74.42	-0.89	0.72	0.641173
4197	2R_DroMel_CAF1	13,805,654 – 13,805,747	- - - - - - - - -	6750	13,805,654 – 13,805,747	+	6	101	79.36	-3.73	0.46	0.985140
4198	2R_DroMel_CAF1	13,806,016 – 13,806,119	- - - - - - - - -	6751	13,806,016 – 13,806,119	-	5	109	90.54	-2.14	0.80	0.963822
4199	2R_DroMel_CAF1	13,808,255 – 13,808,361	- - - - - - - - -	6752	13,808,255 – 13,808,361	+	3	107	71.24	-1.82	0.66	0.993708
4199	2R_DroMel_CAF1	13,808,255 – 13,808,361	- - - - - - - - -	6753	13,808,255 – 13,808,361	-	3	107	71.24	-1.68	0.64	0.972739
4200	2R_DroMel_CAF1	13,809,341 – 13,809,454	- - - "knownCDS=Parent=FBtr0086756;Name=CG14502-cds, ;Dbxref=FlyBase+Annotation+IDs:CG14502-RA" - - - - -	6754	13,809,341 – 13,809,454	+	6	113	86.14	-2.33	0.83	0.861326
4201	2R_DroMel_CAF1	13,811,907 – 13,812,006	- - - "knownCDS=Parent=FBtr0086760;Name=CG18538-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18538-RA" - - - - -	6755	13,811,907 – 13,812,006	-	5	108	83.14	-1.88	0.66	0.669753
4202	2R_DroMel_CAF1	13,813,543 – 13,813,662	- - "RNAmicro=f:13813543_t:13813661_strand:+_p:0.827650" "knownCDS=Parent=FBtr0086761;Name=CG18539-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18539-RA" - - - - -	6756	13,813,543 – 13,813,662	+	6	119	83.47	-2.10	0.70	0.634464
4203	2R_DroMel_CAF1	13,815,337 – 13,815,444	- - - - - - - - -	6757	13,815,337 – 13,815,444	+	6	119	78.93	-2.03	0.49	0.539006
4204	2R_DroMel_CAF1	13,819,399 – 13,819,496	- - - - - - - - -	6758	13,819,399 – 13,819,496	-	5	103	80.13	-1.76	0.63	0.637862
4205	2R_DroMel_CAF1	13,828,818 – 13,828,928	- - - - - - - - -	6759	13,828,818 – 13,828,928	+	4	111	93.61	-2.52	0.74	0.599407
4206	2R_DroMel_CAF1	13,829,836 – 13,829,971	- - - - - - - - -	6760	13,829,836 – 13,829,943	-	3	110	84.28	-1.28	0.91	0.760070
				6761	13,829,866 – 13,829,971	+	6	110	82.88	-1.72	0.76	0.662631
				6762	13,829,866 – 13,829,971	-	6	110	82.88	-1.96	0.67	0.616743
4207	2R_DroMel_CAF1	13,831,480 – 13,831,573	- - - - - - - - -	6763	13,831,480 – 13,831,573	+	6	101	94.49	-1.19	0.98	0.971878
4208	2R_DroMel_CAF1	13,833,852 – 13,833,951	- - - - - - - - -	6764	13,833,852 – 13,833,951	+	5	101	93.66	-1.41	0.88	0.843061
4209	2R_DroMel_CAF1	13,834,568 – 13,834,659	- - - - - - - - -	6765	13,834,568 – 13,834,659	+	6	92	85.67	-3.46	0.77	0.906976
4210	2R_DroMel_CAF1	13,838,723 – 13,838,840	- - - - - - - - -	6766	13,838,723 – 13,838,840	+	5	120	92.19	-1.88	0.79	0.872059
4211	2R_DroMel_CAF1	13,839,992 – 13,840,091	- - - - - - - - -	6767	13,839,992 – 13,840,091	+	5	111	86.63	-1.84	0.72	0.680030
4212	2R_DroMel_CAF1	13,840,323 – 13,840,428	- - - - - - - - -	6768	13,840,323 – 13,840,428	-	5	111	82.26	-1.93	0.61	0.642603
4213	2R_DroMel_CAF1	13,846,373 – 13,846,484	- - - - - - - - -	6769	13,846,373 – 13,846,484	-	5	113	72.25	-1.70	0.51	0.647474
4214	2R_DroMel_CAF1	13,850,753 – 13,850,846	- - - - - - - - -	6770	13,850,753 – 13,850,846	+	6	111	82.68	-1.38	0.77	0.540738
4215	2R_DroMel_CAF1	13,851,464 – 13,851,558	- - - - - - - - -	6771	13,851,464 – 13,851,558	+	5	103	81.42	-1.52	0.70	0.521275
4216	2R_DroMel_CAF1	13,852,962 – 13,853,058	- - - - - - - - -	6772	13,852,962 – 13,853,058	+	4	100	79.87	-2.06	0.59	0.743736
4217	2R_DroMel_CAF1	13,857,007 – 13,857,127	- - - - - - - - -	6773	13,857,007 – 13,857,127	-	5	120	89.57	-2.29	0.80	0.977253
4218	2R_DroMel_CAF1	13,857,960 – 13,858,052	- - - - - - - - -	6774	13,857,960 – 13,858,052	+	5	92	83.02	-1.70	0.67	0.565167
4219	2R_DroMel_CAF1	13,859,569 – 13,859,669	- - - - - - - - -	6775	13,859,569 – 13,859,669	+	6	107	77.76	-2.57	0.66	0.981096
4219	2R_DroMel_CAF1	13,859,569 – 13,859,669	- - - - - - - - -	6776	13,859,569 – 13,859,669	-	6	107	77.76	-2.41	0.69	0.976628
4220	2R_DroMel_CAF1	13,862,215 – 13,862,313	- - - - - - - - -	6777	13,862,215 – 13,862,313	+	5	99	87.26	-1.91	0.83	0.925231
4220	2R_DroMel_CAF1	13,862,215 – 13,862,313	- - - - - - - - -	6778	13,862,215 – 13,862,313	-	5	99	87.26	-1.83	0.82	0.878588
4221	2R_DroMel_CAF1	13,862,346 – 13,862,476	- - - - - - - - -	6779	13,862,346 – 13,862,458	-	5	120	82.06	-2.54	0.58	0.917767
4221	2R_DroMel_CAF1	13,862,346 – 13,862,476	- - - - - - - - -	6780	13,862,386 – 13,862,476	-	4	98	80.35	-2.31	0.59	0.875074
4222	2R_DroMel_CAF1	13,870,982 – 13,871,080	- - - - - - - - -	6781	13,870,982 – 13,871,080	-	6	111	82.87	-3.32	0.58	0.837450
4223	2R_DroMel_CAF1	13,888,035 – 13,888,135	- - - - - - - - -	6782	13,888,035 – 13,888,135	+	3	119	78.24	-1.94	0.81	0.975590
4223	2R_DroMel_CAF1	13,888,035 – 13,888,135	- - - - - - - - -	6783	13,888,035 – 13,888,135	-	3	119	78.24	-1.52	0.82	0.882414
4224	2R_DroMel_CAF1	13,889,122 – 13,889,270	- - - - - - - - -	6784	13,889,122 – 13,889,233	+	6	117	81.41	-1.99	0.73	0.834410
4224	2R_DroMel_CAF1	13,889,122 – 13,889,270	- - - - - - - - -	6785	13,889,156 – 13,889,270	+	6	117	85.32	-1.26	0.92	0.555036
4225	2R_DroMel_CAF1	13,889,740 – 13,889,831	- - - - - - - - -	6786	13,889,740 – 13,889,831	+	6	114	75.36	-0.95	0.75	0.731261
4226	2R_DroMel_CAF1	13,896,795 – 13,896,891	- - - - - - - - -	6787	13,896,795 – 13,896,891	+	5	112	70.58	-1.68	0.45	0.575535
4227	2R_DroMel_CAF1	13,899,330 – 13,899,444	- - - - - - - - -	6788	13,899,330 – 13,899,444	+	5	120	76.96	-2.29	0.38	0.945537
4228	2R_DroMel_CAF1	13,899,524 – 13,899,644	- - - - - - - - -	6789	13,899,524 – 13,899,644	-	5	120	82.27	-1.70	0.67	0.600314
4229	2R_DroMel_CAF1	13,900,133 – 13,900,226	- - "RNAmicro=f:13900133_t:13900228_strand:+_p:0.593059" "knownCDS=Parent=FBtr0086728;Name=CG15067-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15067-RA" - - - - -	6790	13,900,133 – 13,900,226	+	6	96	76.30	-1.42	0.65	0.766459
4230	2R_DroMel_CAF1	13,906,138 – 13,906,230	- - - - - - - - -	6791	13,906,138 – 13,906,230	-	5	100	75.42	-1.95	0.63	0.940493
4231	2R_DroMel_CAF1	13,909,849 – 13,909,969	- - - "knownCDS=Parent=FBtr0086668;Name=Idgf5-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5154-RA" - - - - -	6792	13,909,849 – 13,909,969	+	6	120	78.39	-1.50	0.66	0.768880
4232	2R_DroMel_CAF1	13,922,717 – 13,922,872	- - - "knownCDS=Parent=FBtr0086676;Name=GstE8-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17533-RA" - - - - -	6793	13,922,717 – 13,922,834	-	6	120	82.17	-2.18	0.68	0.768694
4232	2R_DroMel_CAF1	13,922,717 – 13,922,872		6794	13,922,754 – 13,922,872	-	6	120	84.66	-2.12	0.75	0.622381
4233	2R_DroMel_CAF1	13,937,641 – 13,937,750	- - - - - - - - -	6795	13,937,641 – 13,937,750	-	3	115	73.94	-2.57	0.51	0.942769
4234	2R_DroMel_CAF1	13,957,460 – 13,957,562	- - - - - - - - -	6796	13,957,460 – 13,957,562	-	5	111	88.08	-1.50	0.79	0.584031
4235	2R_DroMel_CAF1	13,958,085 – 13,958,185	- - - - - - - - -	6797	13,958,085 – 13,958,185	+	5	108	71.89	-2.18	0.47	0.977976
4236	2R_DroMel_CAF1	13,979,589 – 13,979,683	- - - - - - - - -	6798	13,979,589 – 13,979,683	+	4	94	89.89	-1.93	0.76	0.760690
4236	2R_DroMel_CAF1	13,979,589 – 13,979,683	- - - - - - - - -	6799	13,979,589 – 13,979,683	-	4	94	89.89	-2.65	0.74	0.882040
4237	2R_DroMel_CAF1	13,981,591 – 13,981,710	- - - - - - - - -	6800	13,981,591 – 13,981,710	+	5	120	87.94	-1.83	0.76	0.773396
4237	2R_DroMel_CAF1	13,981,591 – 13,981,710	- - - - - - - - -	6801	13,981,591 – 13,981,710	-	5	120	87.94	-1.65	0.75	0.611554
4238	2R_DroMel_CAF1	13,982,820 – 13,982,930	- - - - - - - - -	6802	13,982,820 – 13,982,930	-	6	111	76.66	-0.79	0.79	0.601206
4239	2R_DroMel_CAF1	13,984,226 – 13,984,327	- - - - - - - - -	6803	13,984,226 – 13,984,327	+	6	110	82.72	-1.96	0.70	0.681175
4240	2R_DroMel_CAF1	14,010,317 – 14,010,407	- - - - - - - - -	6804	14,010,317 – 14,010,407	+	6	109	77.66	-2.76	0.48	0.966870
4240	2R_DroMel_CAF1	14,010,317 – 14,010,407	- - - - - - - - -	6805	14,010,317 – 14,010,407	-	6	109	77.66	-3.59	0.51	0.995535
4241	2R_DroMel_CAF1	14,013,577 – 14,013,697	- - - - - - - - -	6806	14,013,577 – 14,013,697	+	5	120	97.33	-3.10	0.96	0.999949
4241	2R_DroMel_CAF1	14,013,577 – 14,013,697	- - - - - - - - -	6807	14,013,577 – 14,013,697	-	5	120	97.33	-1.57	0.87	0.832000
4242	2R_DroMel_CAF1	14,017,804 – 14,017,896	- - - - - - - - -	6808	14,017,804 – 14,017,896	+	6	99	85.37	-2.59	0.80	0.840404
4243	2R_DroMel_CAF1	14,021,521 – 14,021,616	- - - - - - - - -	6809	14,021,521 – 14,021,616	-	5	99	94.82	-2.63	0.74	0.741642
4244	2R_DroMel_CAF1	14,027,799 – 14,027,908	- - - - - - - - -	6810	14,027,799 – 14,027,908	+	5	110	96.53	-1.55	0.87	0.853714
4245	2R_DroMel_CAF1	14,028,360 – 14,028,459	- - - - - - - - -	6811	14,028,360 – 14,028,459	-	5	99	97.98	-1.42	0.99	0.936326
4246	2R_DroMel_CAF1	14,029,202 – 14,029,507	- - - - - - - - -	6812	14,029,202 – 14,029,322	+	5	120	99.67	-1.28	1.00	0.641307
				6813	14,029,322 – 14,029,427	+	4	114	86.00	-1.41	0.79	0.526053
				6814	14,029,322 – 14,029,427	-	4	114	86.00	-2.43	0.90	0.988282
				6815	14,029,361 – 14,029,467	+	4	114	88.03	-2.51	0.79	0.959705
				6816	14,029,361 – 14,029,467	-	4	114	88.03	-2.90	0.76	0.968096
				6817	14,029,387 – 14,029,507	-	5	120	97.58	-1.43	0.91	0.832663
4247	2R_DroMel_CAF1	14,029,547 – 14,029,663	- - - - - - - - -	6818	14,029,547 – 14,029,663	+	4	120	90.82	-1.60	0.81	0.649670
4248	2R_DroMel_CAF1	14,029,987 – 14,030,107	- - - - - - - - -	6819	14,029,987 – 14,030,107	+	4	120	95.56	-2.23	0.90	0.925641
4249	2R_DroMel_CAF1	14,030,147 – 14,030,246	- - - - - - - - -	6820	14,030,147 – 14,030,246	-	3	105	81.88	-1.74	0.67	0.574133
4250	2R_DroMel_CAF1	14,030,467 – 14,030,736	- - - - - - - - -	6821	14,030,467 – 14,030,582	+	4	120	93.20	-3.29	0.86	0.979703
				6822	14,030,467 – 14,030,582	-	4	120	93.20	-3.34	0.86	0.980419
				6823	14,030,502 – 14,030,622	+	4	120	94.83	-3.06	0.83	0.920719
				6824	14,030,502 – 14,030,622	-	4	120	94.83	-2.44	0.84	0.888338
				6825	14,030,582 – 14,030,696	+	3	120	84.42	-1.76	0.72	0.531399
				6826	14,030,622 – 14,030,736	-	3	120	82.00	-2.26	0.59	0.616286
4251	2R_DroMel_CAF1	14,031,807 – 14,031,927	- - - - - - - - -	6827	14,031,807 – 14,031,927	-	4	120	98.19	-2.11	0.98	0.884176
4252	2R_DroMel_CAF1	14,038,768 – 14,038,858	- - - - - - - - -	6828	14,038,768 – 14,038,858	+	4	92	82.39	-2.56	0.52	0.619093
4252	2R_DroMel_CAF1	14,038,768 – 14,038,858	- - - - - - - - -	6829	14,038,768 – 14,038,858	-	4	92	82.39	-1.84	0.65	0.706047
4253	2R_DroMel_CAF1	14,042,250 – 14,042,344	- - - - - - - - -	6830	14,042,250 – 14,042,344	-	6	113	86.79	-1.71	0.88	0.800678
4254	2R_DroMel_CAF1	14,051,288 – 14,051,385	- - - - - - - - -	6831	14,051,288 – 14,051,385	-	5	104	75.75	-1.91	0.44	0.737623
4255	2R_DroMel_CAF1	14,052,071 – 14,052,228	- - - "knownCDS=Parent=FBtr0086701;Name=Pepck-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17725-RA" - - - - -	6832	14,052,071 – 14,052,188	+	6	117	79.10	-1.82	0.64	0.842561
				6833	14,052,108 – 14,052,228	+	6	120	81.22	-1.84	0.59	0.568899
				6834	14,052,108 – 14,052,228	-	6	120	81.22	-2.07	0.54	0.500000
4256	2R_DroMel_CAF1	14,055,423 – 14,055,513	- - - - - - - - -	6835	14,055,423 – 14,055,513	-	6	103	80.51	-1.86	0.70	0.831328
4257	2R_DroMel_CAF1	14,061,415 – 14,061,506	- - - - - - - - -	6836	14,061,415 – 14,061,506	+	6	102	73.56	-2.09	0.36	0.691669
4258	2R_DroMel_CAF1	14,065,988 – 14,066,078	- - - - - - - - -	6837	14,065,988 – 14,066,078	+	3	90	98.52	-1.49	1.01	0.667748
4259	2R_DroMel_CAF1	14,073,229 – 14,073,325	- - - "knownCDS=Parent=FBtr0086717;Name=CG30115-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30115-RD" - - - - -	6838	14,073,229 – 14,073,325	-	6	107	76.05	-1.15	0.65	0.542293
4260	2R_DroMel_CAF1	14,073,438 – 14,073,548	- - - "knownCDS=Parent=FBtr0086717;Name=CG30115-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30115-RD" - - - - -	6839	14,073,438 – 14,073,548	+	6	120	78.73	-1.46	0.60	0.500000
4261	2R_DroMel_CAF1	14,074,487 – 14,074,607	- - - "knownCDS=Parent=FBtr0086717;Name=CG30115-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30115-RD" - - - - -	6840	14,074,487 – 14,074,607	-	6	120	80.33	-1.98	0.68	0.861511
4262	2R_DroMel_CAF1	14,074,727 – 14,074,841	- - - "knownCDS=Parent=FBtr0086717;Name=CG30115-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30115-RD" - - - - -	6841	14,074,727 – 14,074,841	+	6	120	80.56	-1.93	0.57	0.607548
4263	2R_DroMel_CAF1	14,074,869 – 14,074,964	- - - "knownCDS=Parent=FBtr0086717;Name=CG30115-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30115-RD" - - - - -	6842	14,074,869 – 14,074,964	-	6	101	76.41	-2.50	0.39	0.876429
4264	2R_DroMel_CAF1	14,076,486 – 14,076,603	- - - - - - - - -	6843	14,076,486 – 14,076,603	+	3	120	89.08	-2.27	0.73	0.567930
4265	2R_DroMel_CAF1	14,076,631 – 14,076,743	- - - - - - - - -	6844	14,076,631 – 14,076,743	+	3	120	94.89	-2.51	0.93	0.942712
4266	2R_DroMel_CAF1	14,077,462 – 14,077,602	- - - - - - - - -	6845	14,077,462 – 14,077,562	-	3	120	84.71	-2.01	0.79	0.758317
4266	2R_DroMel_CAF1	14,077,462 – 14,077,602	- - - - - - - - -	6846	14,077,485 – 14,077,602	-	3	120	96.64	-1.94	0.90	0.682032
4267	2R_DroMel_CAF1	14,078,250 – 14,078,356	- - - - - - - - -	6847	14,078,250 – 14,078,356	+	3	120	89.60	-3.32	0.75	0.880454
4267	2R_DroMel_CAF1	14,078,250 – 14,078,356	- - - - - - - - -	6848	14,078,250 – 14,078,356	-	3	120	89.60	-2.14	0.78	0.586577
4268	2R_DroMel_CAF1	14,078,476 – 14,078,633	- - - - - - - - -	6849	14,078,476 – 14,078,595	+	3	120	93.87	-2.09	0.92	0.842661
				6850	14,078,476 – 14,078,595	-	3	120	93.87	-2.15	0.88	0.766261
				6851	14,078,516 – 14,078,633	+	3	120	92.72	-2.56	0.85	0.863282
4269	2R_DroMel_CAF1	14,078,966 – 14,079,124	- - - - - - - - -	6852	14,078,966 – 14,079,084	-	3	120	95.53	-3.16	0.97	0.990820
				6853	14,079,004 – 14,079,124	+	3	120	99.44	-2.97	0.93	0.952584
				6854	14,079,004 – 14,079,124	-	3	120	99.44	-2.29	0.99	0.945788
4270	2R_DroMel_CAF1	14,079,719 – 14,079,837	- - - - - - - - -	6855	14,079,719 – 14,079,837	+	3	120	89.64	-4.10	0.69	0.834892
4270	2R_DroMel_CAF1	14,079,719 – 14,079,837	- - - - - - - - -	6856	14,079,719 – 14,079,837	-	3	120	89.64	-3.32	0.67	0.735410
4271	2R_DroMel_CAF1	14,080,004 – 14,080,124	- - - - - - - - -	6857	14,080,004 – 14,080,124	+	3	120	65.83	-2.26	0.41	0.519225
4272	2R_DroMel_CAF1	14,080,239 – 14,080,358	- - - - - - - - -	6858	14,080,239 – 14,080,358	-	3	120	95.54	-2.45	0.86	0.807593
4273	2R_DroMel_CAF1	14,080,693 – 14,080,807	- - - - - - - - -	6859	14,080,693 – 14,080,807	+	3	120	96.05	-2.15	0.84	0.598644
4274	2R_DroMel_CAF1	14,081,214 – 14,081,333	- - - - - - - - -	6860	14,081,214 – 14,081,333	+	3	120	95.54	-2.01	0.84	0.527709
4275	2R_DroMel_CAF1	14,081,412 – 14,081,530	- - - - - - - - -	6861	14,081,412 – 14,081,530	-	3	120	93.02	-1.67	0.90	0.541883
4276	2R_DroMel_CAF1	14,081,850 – 14,081,969	- - - - - - - - -	6862	14,081,850 – 14,081,969	+	3	120	92.76	-1.99	0.87	0.661880
4277	2R_DroMel_CAF1	14,082,712 – 14,082,832	- - - - - - - - -	6863	14,082,712 – 14,082,832	-	3	120	93.33	-1.63	0.95	0.704757
4278	2R_DroMel_CAF1	14,083,056 – 14,083,193	- - - - - - - - -	6864	14,083,056 – 14,083,153	+	3	120	83.38	-1.63	0.75	0.535627
				6865	14,083,056 – 14,083,153	-	3	120	83.38	-1.52	0.83	0.615611
				6866	14,083,093 – 14,083,193	+	3	120	86.47	-2.91	0.82	0.953236
4279	2R_DroMel_CAF1	14,083,499 – 14,083,600	- - - - - - - - -	6867	14,083,499 – 14,083,600	-	5	120	77.60	-1.73	0.55	0.515052
4280	2R_DroMel_CAF1	14,083,793 – 14,083,928	- - - - - - - - -	6868	14,083,793 – 14,083,906	+	5	120	79.08	-2.26	0.60	0.941946
4280	2R_DroMel_CAF1	14,083,793 – 14,083,928	- - - - - - - - -	6869	14,083,831 – 14,083,928	-	5	120	82.36	-2.48	0.54	0.834457
4281	2R_DroMel_CAF1	14,084,002 – 14,084,115	- - - - - - - - -	6870	14,084,002 – 14,084,115	+	3	120	73.94	-1.66	0.58	0.671573
4281	2R_DroMel_CAF1	14,084,002 – 14,084,115	- - - - - - - - -	6871	14,084,002 – 14,084,115	-	3	120	73.94	-2.05	0.64	0.990099
4282	2R_DroMel_CAF1	14,085,050 – 14,085,143	- - - - - - - - -	6872	14,085,050 – 14,085,143	-	4	98	91.10	-2.31	0.76	0.824223
4283	2R_DroMel_CAF1	14,085,482 – 14,085,590	- - - - - - - - -	6873	14,085,482 – 14,085,590	-	4	120	78.90	-2.43	0.57	0.933135
4284	2R_DroMel_CAF1	14,086,023 – 14,086,145	- - - - - - - - -	6874	14,086,023 – 14,086,125	+	6	111	80.93	-1.74	0.59	0.522867
				6875	14,086,023 – 14,086,125	-	6	111	80.93	-2.23	0.55	0.691381
				6876	14,086,050 – 14,086,145	+	6	120	73.46	-1.71	0.57	0.858223
				6877	14,086,050 – 14,086,145	-	6	120	73.46	-2.02	0.44	0.835093
4285	2R_DroMel_CAF1	14,088,610 – 14,088,725	- - - - - - - - -	6878	14,088,610 – 14,088,725	+	3	115	92.06	-3.95	0.74	0.827822
4285	2R_DroMel_CAF1	14,088,610 – 14,088,725	- - - - - - - - -	6879	14,088,610 – 14,088,725	-	3	115	92.06	-2.58	0.87	0.903810
4286	2R_DroMel_CAF1	14,090,392 – 14,090,482	- - - - - - - - -	6880	14,090,392 – 14,090,482	-	6	110	76.49	-2.72	0.43	0.969292
4287	2R_DroMel_CAF1	14,098,525 – 14,098,631	- - - - - - - - -	6881	14,098,525 – 14,098,631	-	5	109	92.78	-2.02	0.77	0.816935
4288	2R_DroMel_CAF1	14,098,711 – 14,098,821	- - - - - - - - -	6882	14,098,711 – 14,098,821	-	3	110	81.99	-0.71	0.89	0.500000
4289	2R_DroMel_CAF1	14,100,143 – 14,100,274	- - - - - - - - -	6883	14,100,143 – 14,100,238	+	6	120	74.59	-2.12	0.56	0.963639
4289	2R_DroMel_CAF1	14,100,143 – 14,100,274	- - - - - - - - -	6884	14,100,159 – 14,100,274	+	6	119	84.93	-2.28	0.72	0.558771
4290	2R_DroMel_CAF1	14,100,347 – 14,100,459	- - - - - - - - -	6885	14,100,347 – 14,100,459	+	6	120	80.65	-2.59	0.49	0.728902
4291	2R_DroMel_CAF1	14,102,394 – 14,102,488	- - "RNAmicro=f:14102394_t:14102487_strand:+_p:0.782962" - - - - - -	6886	14,102,394 – 14,102,488	+	6	94	75.55	-2.30	0.36	0.717805
4291	2R_DroMel_CAF1	14,102,394 – 14,102,488		6887	14,102,394 – 14,102,488	-	6	94	75.55	-2.32	0.59	0.982037
4292	2R_DroMel_CAF1	14,103,228 – 14,103,353	- - - - - - - - -	6888	14,103,228 – 14,103,322	+	5	100	92.32	-1.79	0.79	0.829922
				6889	14,103,228 – 14,103,322	-	5	100	92.32	-1.90	0.78	0.837357
				6890	14,103,261 – 14,103,353	-	5	98	91.55	-2.22	0.72	0.687264
4293	2R_DroMel_CAF1	14,104,767 – 14,104,864	- - - - - - - - -	6891	14,104,767 – 14,104,864	+	5	108	91.52	-1.61	0.76	0.575269
4294	2R_DroMel_CAF1	14,105,383 – 14,105,488	- - - - - - - - -	6892	14,105,383 – 14,105,488	+	6	106	74.60	-2.07	0.38	0.640374
4295	2R_DroMel_CAF1	14,122,088 – 14,122,182	- - - - - - - - -	6893	14,122,088 – 14,122,182	+	4	94	88.77	-1.65	0.86	0.780482
4296	2R_DroMel_CAF1	14,124,361 – 14,124,462	- - - - - - - - -	6894	14,124,361 – 14,124,462	+	3	101	86.62	-2.15	0.71	0.614541
4297	2R_DroMel_CAF1	14,126,401 – 14,126,521	- - - - - - - - -	6895	14,126,401 – 14,126,521	+	5	120	94.99	-1.54	0.95	0.982776
4298	2R_DroMel_CAF1	14,131,625 – 14,131,720	- - - - - - - - -	6896	14,131,625 – 14,131,720	-	6	113	75.33	-2.00	0.50	0.856666
4299	2R_DroMel_CAF1	14,136,543 – 14,136,644	- - - - - - - - -	6897	14,136,543 – 14,136,644	+	6	110	78.79	-2.31	0.62	0.940876
4299	2R_DroMel_CAF1	14,136,543 – 14,136,644	- - - - - - - - -	6898	14,136,543 – 14,136,644	-	6	110	78.79	-1.72	0.59	0.693010
4300	2R_DroMel_CAF1	14,138,743 – 14,138,854	- - - - - - - - -	6899	14,138,743 – 14,138,854	+	6	113	76.40	-2.24	0.53	0.943721
4300	2R_DroMel_CAF1	14,138,743 – 14,138,854	- - - - - - - - -	6900	14,138,743 – 14,138,854	-	6	113	76.40	-1.61	0.62	0.814592
4301	2R_DroMel_CAF1	14,143,617 – 14,143,734	- - - "knownCDS=Parent=FBtr0086710;Name=Eip55E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5345-RA" - - - - -	6901	14,143,617 – 14,143,734	-	6	117	88.77	-2.50	0.79	0.683074
4302	2R_DroMel_CAF1	14,145,466 – 14,145,573	- - - "knownCDS=Parent=FBtr0086661;Name=CG5482-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5482-RA" - - - - -	6902	14,145,466 – 14,145,573	+	6	110	78.55	-1.70	0.56	0.585378
4302	2R_DroMel_CAF1	14,145,466 – 14,145,573		6903	14,145,466 – 14,145,573	-	6	110	78.55	-2.07	0.50	0.670592
4303	2R_DroMel_CAF1	14,148,331 – 14,148,503	- - - "knownCDS=Parent=FBtr0086660;Name=CG30122-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30122-RB" - - - - -	6904	14,148,331 – 14,148,429	+	6	111	81.72	-2.51	0.64	0.840259
				6905	14,148,331 – 14,148,429	-	6	111	81.72	-2.74	0.64	0.876357
				6906	14,148,350 – 14,148,466	-	6	120	87.70	-3.22	0.76	0.801818
				6907	14,148,390 – 14,148,503	-	6	120	88.81	-2.82	0.75	0.530692
4304	2R_DroMel_CAF1	14,154,580 – 14,154,673	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000101; Name=Dmel_Gly_GCC_14000101;TFAMID=DmelGGCC-14154659" "tRNAscan=type:Gly:anticodon:GCC f:14154588_t:14154666_strand=-_cove=82.25" - - "Rfam=AC099683.1/51353-51419_RF00005;tRNA;\|6e-26" - - "ncRNAdb=HsapiAK024805_RNA\|2e-20" "Flybase=FBgn0011859:transfer_RNA:gly3:22BCa:cytosolic_tRNA_gene\|4e-36"	6908	14,154,580 – 14,154,673	+	5	99	90.10	-1.50	1.00	0.971442
4304	2R_DroMel_CAF1	14,154,580 – 14,154,673		6909	14,154,580 – 14,154,673	-	5	99	90.10	-1.79	0.98	0.994908
4305	2R_DroMel_CAF1	14,157,437 – 14,157,532	- - - "knownCDS=Parent=FBtr0086657, FBtr0086658;Name=SP2637-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5473-RA, FlyBase+Annotation+IDs:CG5473-RB" - - - - -	6910	14,157,437 – 14,157,532	+	6	105	81.11	-2.35	0.72	0.899484
4305	2R_DroMel_CAF1	14,157,437 – 14,157,532		6911	14,157,437 – 14,157,532	-	6	105	81.11	-1.37	0.69	0.571147
4306	2R_DroMel_CAF1	14,164,998 – 14,165,093	- - - - - - - - -	6912	14,164,998 – 14,165,093	-	6	106	79.88	-1.79	0.59	0.668873
4307	2R_DroMel_CAF1	14,166,420 – 14,166,522	- - - - - - - - -	6913	14,166,420 – 14,166,522	+	6	110	77.55	-1.97	0.59	0.889521
4308	2R_DroMel_CAF1	14,168,613 – 14,168,703	- - - - - - - - -	6914	14,168,613 – 14,168,703	+	4	96	76.91	-1.44	0.80	0.745017
4309	2R_DroMel_CAF1	14,173,066 – 14,173,161	- - - - - - - - -	6915	14,173,066 – 14,173,161	-	6	97	83.07	-1.44	0.76	0.533732
4310	2R_DroMel_CAF1	14,176,942 – 14,177,048	- - - - - - - - -	6916	14,176,942 – 14,177,048	-	6	115	83.18	-1.76	0.67	0.516021
4311	2R_DroMel_CAF1	14,177,126 – 14,177,247	- - - - - - - - -	6917	14,177,126 – 14,177,227	-	6	113	75.32	-1.60	0.53	0.551511
4311	2R_DroMel_CAF1	14,177,126 – 14,177,247	- - - - - - - - -	6918	14,177,155 – 14,177,247	-	5	94	84.80	-1.63	0.68	0.500000
4312	2R_DroMel_CAF1	14,178,331 – 14,178,427	- - - - - - - - -	6919	14,178,331 – 14,178,427	+	5	120	74.76	-1.42	0.65	0.607359
4313	2R_DroMel_CAF1	14,178,554 – 14,178,658	- - - - - - - - -	6920	14,178,554 – 14,178,658	+	6	120	79.96	-2.02	0.62	0.821947
4314	2R_DroMel_CAF1	14,178,871 – 14,178,977	- - - - - - - - -	6921	14,178,871 – 14,178,977	-	5	116	82.66	-2.17	0.79	0.942242
4315	2R_DroMel_CAF1	14,180,198 – 14,180,318	- - - "knownCDS=Parent=FBtr0086653;Name=CG33136-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33136-RA" - - - - -	6922	14,180,198 – 14,180,318	-	5	120	80.00	-2.13	0.64	0.908056
4316	2R_DroMel_CAF1	14,181,493 – 14,181,592	- - "RNAmicro=f:14181493_t:14181605_strand:+_p:0.570251" - - - - - -	6923	14,181,493 – 14,181,592	-	3	113	68.81	-3.30	0.50	0.999850
4317	2R_DroMel_CAF1	14,185,643 – 14,185,748	- - - - - - - - -	6924	14,185,643 – 14,185,748	+	6	120	80.22	-1.42	0.91	0.786271
4317	2R_DroMel_CAF1	14,185,643 – 14,185,748	- - - - - - - - -	6925	14,185,643 – 14,185,748	-	6	120	80.22	-1.53	0.77	0.799413
4318	2R_DroMel_CAF1	14,188,852 – 14,188,955	- - - - - - - - -	6926	14,188,852 – 14,188,955	+	6	113	76.66	-1.90	0.48	0.599894
4319	2R_DroMel_CAF1	14,190,317 – 14,190,407	- - - - - - - - -	6927	14,190,317 – 14,190,407	+	4	92	87.31	-3.91	0.86	0.996974
4319	2R_DroMel_CAF1	14,190,317 – 14,190,407	- - - - - - - - -	6928	14,190,317 – 14,190,407	-	4	92	87.31	-2.85	0.89	0.995424
4320	2R_DroMel_CAF1	14,195,230 – 14,195,330	- - - "knownCDS=Parent=FBtr0086649, FBtr0086650, FBtr0086651;Name=CG15086-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15086-RB, FlyBase+Annotation+IDs:CG15086-RD, FlyBase+Annotation+IDs:CG15086-RC" - - - - -	6929	14,195,230 – 14,195,330	+	6	100	69.44	-1.58	0.50	0.717882
4321	2R_DroMel_CAF1	14,198,725 – 14,198,831	- - - - - - - - -	6930	14,198,725 – 14,198,831	-	5	106	80.85	-1.60	0.67	0.554343
4322	2R_DroMel_CAF1	14,204,362 – 14,204,473	- - - - - - - - -	6931	14,204,362 – 14,204,473	-	3	119	72.00	-2.06	0.49	0.539893
4323	2R_DroMel_CAF1	14,204,786 – 14,204,878	- - - - - - - - -	6932	14,204,786 – 14,204,878	+	4	92	85.45	-1.69	0.75	0.711716
4324	2R_DroMel_CAF1	14,207,622 – 14,207,736	- - - "knownCDS=Parent=FBtr0086604;Name=CG15072-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15072-RA" - - - - -	6933	14,207,622 – 14,207,736	+	6	117	81.68	-2.20	0.64	0.774276
4325	2R_DroMel_CAF1	14,212,663 – 14,212,757	- - - - - - - - -	6934	14,212,663 – 14,212,757	-	5	102	72.71	-1.54	0.15	0.584220
4326	2R_DroMel_CAF1	14,213,373 – 14,213,468	- - - - - - - - -	6935	14,213,373 – 14,213,468	+	5	101	81.91	-2.34	0.39	0.529757
4327	2R_DroMel_CAF1	14,218,274 – 14,218,403	- - - "knownCDS=Parent=FBtr0086606;Name=CG18604-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18604-RA" - - - - -	6936	14,218,274 – 14,218,379	+	6	111	80.11	-2.07	0.64	0.854572
				6937	14,218,274 – 14,218,379	-	6	111	80.11	-1.18	0.68	0.500000
				6938	14,218,299 – 14,218,403	+	6	104	80.90	-1.26	0.70	0.543587
4328	2R_DroMel_CAF1	14,220,238 – 14,220,349	- - - - - - - - -	6939	14,220,238 – 14,220,349	-	5	111	96.31	-2.10	0.88	0.992091
4329	2R_DroMel_CAF1	14,228,293 – 14,228,460	- - - - - - - - -	6940	14,228,293 – 14,228,388	+	6	100	78.92	-2.19	0.48	0.644171
				6941	14,228,293 – 14,228,388	-	6	100	78.92	-2.33	0.42	0.537381
				6942	14,228,351 – 14,228,460	-	5	117	83.87	-1.92	0.60	0.505303
4330	2R_DroMel_CAF1	14,228,768 – 14,228,873	- - - - - - - - -	6943	14,228,768 – 14,228,873	-	6	110	73.54	-2.38	0.48	0.982058
4331	2R_DroMel_CAF1	14,234,589 – 14,234,682	- - - - - - - - -	6944	14,234,589 – 14,234,682	+	6	110	76.51	-1.53	0.67	0.871789
4332	2R_DroMel_CAF1	14,235,591 – 14,235,689	- - - - - - - - -	6945	14,235,591 – 14,235,689	-	5	98	92.14	-1.62	0.75	0.521108
4333	2R_DroMel_CAF1	14,241,613 – 14,241,706	- - - - - - - - -	6946	14,241,613 – 14,241,706	+	5	97	83.31	-2.13	0.58	0.623691
4334	2R_DroMel_CAF1	14,244,578 – 14,244,684	- - - - - - - - -	6947	14,244,578 – 14,244,684	-	6	106	73.86	-1.51	0.56	0.628763
4335	2R_DroMel_CAF1	14,244,764 – 14,244,884	- - - "knownCDS=Parent=FBtr0086645, FBtr0086646;Name=CG15088-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15088-RA, FlyBase+Annotation+IDs:CG15088-RB" - - - - -	6948	14,244,764 – 14,244,884	-	6	120	79.78	-1.76	0.58	0.601365
4336	2R_DroMel_CAF1	14,245,263 – 14,245,360	- - - - - - - - -	6949	14,245,263 – 14,245,360	+	6	117	80.33	-2.84	0.47	0.843183
4337	2R_DroMel_CAF1	14,246,555 – 14,246,655	- - - - - - - - -	6950	14,246,555 – 14,246,655	+	6	105	79.82	-1.82	0.58	0.661771
4338	2R_DroMel_CAF1	14,256,621 – 14,256,727	- - - - - - - - -	6951	14,256,621 – 14,256,727	-	5	112	79.07	-1.60	0.64	0.541240
4339	2R_DroMel_CAF1	14,266,350 – 14,266,449	- - - - - - - - -	6952	14,266,350 – 14,266,449	+	6	112	83.33	-2.19	0.62	0.512759
4339	2R_DroMel_CAF1	14,266,350 – 14,266,449	- - - - - - - - -	6953	14,266,350 – 14,266,449	-	6	112	83.33	-1.69	0.71	0.553349
4340	2R_DroMel_CAF1	14,270,795 – 14,270,908	- - - "knownCDS=Parent=FBtr0086609;Name=Cyp12b2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15077-RA" - - - - -	6954	14,270,795 – 14,270,908	-	6	113	81.31	-1.97	0.75	0.846611
4341	2R_DroMel_CAF1	14,272,282 – 14,272,411	- - - "knownCDS=Parent=FBtr0100075;Name=CG34020-cds, ;Dbxref=FlyBase+Annotation+IDs:CG34020-RA" - - - - -	6955	14,272,282 – 14,272,383	-	6	101	85.02	-2.69	0.66	0.500000
4341	2R_DroMel_CAF1	14,272,282 – 14,272,411		6956	14,272,303 – 14,272,411	-	6	109	80.04	-2.16	0.59	0.826635
4342	2R_DroMel_CAF1	14,284,996 – 14,285,094	"known=exon_Parent=Dmel\CR_TRNA_ATT_14000102" "tRNAscan=type:Leu:anticodon:AAG f:14284996_t:14285074_strand=+_cove=52.27" - - "Rfam=AE003812.3/86565-86484_RF00005;tRNA;\|5e-39" - - - "Flybase=FBgn0050229:CR30229:cytosolic_tRNA_gene\|6e-41"	6957	14,284,996 – 14,285,094	-	6	107	90.63	-1.00	0.99	0.826009
4343	2R_DroMel_CAF1	14,286,684 – 14,286,785	- - - - - - - - -	6958	14,286,684 – 14,286,785	-	6	101	75.79	-2.14	0.54	0.939436
4344	2R_DroMel_CAF1	14,288,563 – 14,288,680	- - - - - - - - -	6959	14,288,563 – 14,288,680	+	6	120	72.36	-1.54	0.59	0.838545
4345	2R_DroMel_CAF1	14,291,271 – 14,291,391	- - - - - - - - -	6960	14,291,271 – 14,291,391	+	6	120	82.94	-2.04	0.65	0.591179
4346	2R_DroMel_CAF1	14,292,588 – 14,292,688	- - - - - - - - -	6961	14,292,588 – 14,292,688	+	6	106	81.85	-1.56	0.65	0.544593
4347	2R_DroMel_CAF1	14,295,452 – 14,295,551	- - - - - - - - -	6962	14,295,452 – 14,295,551	-	6	109	76.51	-2.22	0.56	0.953296
4348	2R_DroMel_CAF1	14,297,837 – 14,297,930	- - - - - - - - -	6963	14,297,837 – 14,297,930	+	5	106	81.57	-2.49	0.40	0.737151
4349	2R_DroMel_CAF1	14,299,242 – 14,299,347	- - - - - - - - -	6964	14,299,242 – 14,299,347	-	6	120	79.81	-2.87	0.60	0.960075
4350	2R_DroMel_CAF1	14,303,914 – 14,304,005	- - - - - - - - -	6965	14,303,914 – 14,304,005	+	4	107	78.62	-2.64	0.75	0.997558
4351	2R_DroMel_CAF1	14,315,699 – 14,315,803	- - - - - - - - -	6966	14,315,699 – 14,315,803	+	6	115	80.66	-1.80	0.70	0.805694
4352	2R_DroMel_CAF1	14,320,508 – 14,320,605	- - - - - - - - -	6967	14,320,508 – 14,320,605	-	6	119	80.06	-1.91	0.54	0.551751
4353	2R_DroMel_CAF1	14,322,576 – 14,322,692	- - - - - - - - -	6968	14,322,576 – 14,322,692	+	5	120	73.32	-2.23	0.51	0.982164
4353	2R_DroMel_CAF1	14,322,576 – 14,322,692	- - - - - - - - -	6969	14,322,576 – 14,322,692	-	5	120	73.32	-1.73	0.42	0.558200
4354	2R_DroMel_CAF1	14,322,954 – 14,323,108	- - - - - - - - -	6970	14,322,954 – 14,323,069	+	5	120	72.76	-1.84	0.15	0.871325
4354	2R_DroMel_CAF1	14,322,954 – 14,323,108	- - - - - - - - -	6971	14,322,991 – 14,323,108	+	5	120	75.67	-1.72	0.06	0.851709
4355	2R_DroMel_CAF1	14,325,074 – 14,325,176	- - - - - - - - -	6972	14,325,074 – 14,325,176	+	6	114	76.97	-1.95	0.45	0.511747
4355	2R_DroMel_CAF1	14,325,074 – 14,325,176	- - - - - - - - -	6973	14,325,074 – 14,325,176	-	6	114	76.97	-1.68	0.52	0.507169
4356	2R_DroMel_CAF1	14,325,587 – 14,325,677	- - - - - - - - -	6974	14,325,587 – 14,325,677	-	6	94	79.95	-1.45	0.64	0.572644
4357	2R_DroMel_CAF1	14,327,218 – 14,327,314	- - - - - - - - -	6975	14,327,218 – 14,327,314	-	5	96	86.04	-1.63	0.72	0.560479
4358	2R_DroMel_CAF1	14,327,501 – 14,327,621	- - - - - - - - -	6976	14,327,501 – 14,327,621	+	3	120	76.85	-1.45	0.64	0.500000
4359	2R_DroMel_CAF1	14,327,978 – 14,328,068	- - - - - - - - -	6977	14,327,978 – 14,328,068	+	5	93	96.28	-1.61	0.82	0.672238
4359	2R_DroMel_CAF1	14,327,978 – 14,328,068	- - - - - - - - -	6978	14,327,978 – 14,328,068	-	5	93	96.28	-2.22	0.77	0.714687
4360	2R_DroMel_CAF1	14,333,281 – 14,333,371	- - - - - - - - -	6979	14,333,281 – 14,333,371	-	5	107	73.91	-1.68	0.51	0.543623
4361	2R_DroMel_CAF1	14,333,564 – 14,333,701	- - - - - - - - -	6980	14,333,564 – 14,333,672	+	6	120	83.23	-2.33	0.78	0.846742
				6981	14,333,592 – 14,333,701	+	6	111	83.88	-3.74	0.69	0.902294
				6982	14,333,592 – 14,333,701	-	6	111	83.88	-2.80	0.68	0.724589
4362	2R_DroMel_CAF1	14,334,548 – 14,334,647	- - - "knownCDS=Parent=FBtr0086614, FBtr0086615;Name=l(2)03709-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15081-RC, FlyBase+Annotation+IDs:CG15081-RB" - - - - -	6983	14,334,548 – 14,334,647	+	6	108	78.24	-1.14	0.78	0.745576
4363	2R_DroMel_CAF1	14,334,678 – 14,334,776	- - - - - - - - -	6984	14,334,678 – 14,334,776	+	6	108	74.53	-1.79	0.47	0.572716
4364	2R_DroMel_CAF1	14,335,731 – 14,335,849	- - "RNAmicro=f:14335731_t:14335849_strand:+_p:0.998948" - - - - - -	6985	14,335,731 – 14,335,849	+	5	119	84.87	-4.77	0.89	0.999687
4364	2R_DroMel_CAF1	14,335,731 – 14,335,849		6986	14,335,731 – 14,335,849	-	5	119	84.87	-3.66	0.77	0.998534
4365	2R_DroMel_CAF1	14,340,466 – 14,340,581	- - - - - - - - -	6987	14,340,466 – 14,340,581	+	6	120	77.00	-1.17	0.72	0.757483
4366	2R_DroMel_CAF1	14,341,830 – 14,341,922	- - - - - - - - -	6988	14,341,830 – 14,341,922	+	6	111	77.24	-1.62	0.68	0.885577
4367	2R_DroMel_CAF1	14,347,891 – 14,348,006	- - - "knownCDS=Parent=FBtr0086617;Name=CG15082-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15082-RA" - - - - -	6989	14,347,891 – 14,348,006	+	6	120	78.23	-1.31	0.78	0.826356
4368	2R_DroMel_CAF1	14,355,784 – 14,355,897	- - - "knownCDS=Parent=FBtr0086628;Name=CG15099-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15099-RA" - - - - -	6990	14,355,784 – 14,355,897	+	6	113	77.10	-2.36	0.57	0.964334
4368	2R_DroMel_CAF1	14,355,784 – 14,355,897		6991	14,355,784 – 14,355,897	-	6	113	77.10	-2.79	0.50	0.983371
4369	2R_DroMel_CAF1	14,363,188 – 14,363,308	- - - "knownCDS=Parent=FBtr0086627;Name=CG15100-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15100-RA" - - - - -	6992	14,363,188 – 14,363,308	-	6	120	82.94	-1.63	0.67	0.500000
4370	2R_DroMel_CAF1	14,365,795 – 14,365,910	- - - "knownCDS=Parent=FBtr0086619;Name=CG15084-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15084-RA" - - - - -	6993	14,365,795 – 14,365,910	+	6	120	81.65	-2.31	0.54	0.605966
4371	2R_DroMel_CAF1	14,366,190 – 14,366,310	- - - "knownCDS=Parent=FBtr0086619;Name=CG15084-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15084-RA" - - - - -	6994	14,366,190 – 14,366,310	-	6	120	81.44	-1.38	0.66	0.500000
4372	2R_DroMel_CAF1	14,367,904 – 14,368,011	- - - - - - - - -	6995	14,367,904 – 14,368,011	+	4	107	85.29	-1.87	0.62	0.564522
4373	2R_DroMel_CAF1	14,369,569 – 14,369,660	- - - "knownCDS=Parent=FBtr0086625;Name=Jheh1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15101-RA" - - - - -	6996	14,369,569 – 14,369,660	+	6	94	76.52	-1.58	0.61	0.775266
4374	2R_DroMel_CAF1	14,375,053 – 14,375,184	- - - - - - - - -	6997	14,375,053 – 14,375,163	+	3	119	75.14	-2.15	0.82	0.998881
4374	2R_DroMel_CAF1	14,375,053 – 14,375,184	- - - - - - - - -	6998	14,375,084 – 14,375,184	+	3	100	90.60	-2.60	0.82	0.847059
4375	2R_DroMel_CAF1	14,379,770 – 14,379,885	- - - - - - - - -	6999	14,379,770 – 14,379,885	-	5	115	90.70	-1.30	0.85	0.600271
4376	2R_DroMel_CAF1	14,385,946 – 14,386,042	- - - - - - - - -	7000	14,385,946 – 14,386,042	-	6	115	83.58	-2.24	0.65	0.561561
4377	2R_DroMel_CAF1	14,387,684 – 14,387,775	- - - - - - - - -	7001	14,387,684 – 14,387,775	+	4	91	83.23	-2.58	0.55	0.743651
4377	2R_DroMel_CAF1	14,387,684 – 14,387,775	- - - - - - - - -	7002	14,387,684 – 14,387,775	-	4	91	83.23	-2.78	0.60	0.924275
4378	2R_DroMel_CAF1	14,387,861 – 14,387,968	- - - - - - - - -	7003	14,387,861 – 14,387,968	+	6	119	77.74	-2.88	0.61	0.987842
4378	2R_DroMel_CAF1	14,387,861 – 14,387,968	- - - - - - - - -	7004	14,387,861 – 14,387,968	-	6	119	77.74	-2.61	0.68	0.982241
4379	2R_DroMel_CAF1	14,397,561 – 14,397,659	- - - - - - - - -	7005	14,397,561 – 14,397,659	+	6	104	77.67	-1.46	0.65	0.748790
4379	2R_DroMel_CAF1	14,397,561 – 14,397,659	- - - - - - - - -	7006	14,397,561 – 14,397,659	-	6	104	77.67	-1.86	0.60	0.858845
4380	2R_DroMel_CAF1	14,398,158 – 14,398,259	- - - - - - - - -	7007	14,398,158 – 14,398,259	-	6	106	81.61	-2.17	0.68	0.816478
4381	2R_DroMel_CAF1	14,404,425 – 14,404,537	- - - - - - - - -	7008	14,404,425 – 14,404,537	-	5	120	85.51	-2.14	0.61	0.554545
4382	2R_DroMel_CAF1	14,405,931 – 14,406,027	- - - - - - - - -	7009	14,405,931 – 14,406,027	-	3	96	77.90	-1.87	0.64	0.848403
4383	2R_DroMel_CAF1	14,414,403 – 14,414,494	- - - - - - - - -	7010	14,414,403 – 14,414,494	+	6	100	73.62	-2.51	0.20	0.530046
4384	2R_DroMel_CAF1	14,416,136 – 14,416,230	- - - - - - - - -	7011	14,416,136 – 14,416,230	+	6	102	83.93	-3.04	0.69	0.791022
4384	2R_DroMel_CAF1	14,416,136 – 14,416,230	- - - - - - - - -	7012	14,416,136 – 14,416,230	-	6	102	83.93	-2.53	0.62	0.516095
4385	2R_DroMel_CAF1	14,420,097 – 14,420,192	- - - - - - - - -	7013	14,420,097 – 14,420,192	+	6	108	72.67	-1.94	0.37	0.594819
4386	2R_DroMel_CAF1	14,424,443 – 14,424,551	- - - "knownCDS=Parent=FBtr0086602;Name=Vha100-3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30329-RA" - - - - -	7014	14,424,443 – 14,424,551	+	6	111	74.62	-2.63	0.52	0.992248
4387	2R_DroMel_CAF1	14,426,044 – 14,426,149	- - - "knownCDS=Parent=FBtr0086602;Name=Vha100-3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30329-RA" - - - - -	7015	14,426,044 – 14,426,149	-	6	108	74.50	-1.71	0.48	0.531093
4388	2R_DroMel_CAF1	14,432,343 – 14,432,441	- - - - - - - - -	7016	14,432,343 – 14,432,441	-	6	114	85.74	-2.07	0.75	0.507133
4389	2R_DroMel_CAF1	14,432,963 – 14,433,092	- - - - - - - - -	7017	14,432,963 – 14,433,071	+	6	120	71.55	-1.98	0.47	0.916776
				7018	14,432,963 – 14,433,071	-	6	120	71.55	-3.18	0.68	0.995811
				7019	14,432,993 – 14,433,092	+	6	120	76.70	-1.92	0.50	0.693334
				7020	14,432,993 – 14,433,092	-	6	120	76.70	-2.90	0.63	0.992376
4390	2R_DroMel_CAF1	14,434,334 – 14,434,451	- - - - - - - - -	7021	14,434,334 – 14,434,451	-	6	117	78.85	-1.28	0.69	0.653172
4391	2R_DroMel_CAF1	14,443,782 – 14,443,900	- - - - - - - - -	7022	14,443,782 – 14,443,900	+	5	118	81.05	-2.29	0.58	0.883141
4391	2R_DroMel_CAF1	14,443,782 – 14,443,900	- - - - - - - - -	7023	14,443,782 – 14,443,900	-	5	118	81.05	-2.34	0.52	0.835202
4392	2R_DroMel_CAF1	14,454,618 – 14,454,708	- - - - - - - - -	7024	14,454,618 – 14,454,708	+	5	112	79.56	-2.65	0.50	0.972632
4392	2R_DroMel_CAF1	14,454,618 – 14,454,708	- - - - - - - - -	7025	14,454,618 – 14,454,708	-	5	112	79.56	-2.04	0.48	0.655102
4393	2R_DroMel_CAF1	14,454,900 – 14,455,012	- - - - - - - - -	7026	14,454,900 – 14,455,012	-	5	114	82.89	-2.10	0.54	0.539164
4394	2R_DroMel_CAF1	14,455,314 – 14,455,423	- - - - - - - - -	7027	14,455,314 – 14,455,423	+	6	120	81.59	-1.24	0.75	0.538611
4395	2R_DroMel_CAF1	14,458,828 – 14,458,928	- - - - - - - - -	7028	14,458,828 – 14,458,928	-	4	101	91.04	-1.69	0.89	0.836781
4396	2R_DroMel_CAF1	14,470,540 – 14,470,700	- - - "knownCDS=Parent=FBtr0086566, FBtr0086567, FBtr0086568, FBtr0086569;Name=sano-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12758-RB, FlyBase+Annotation+IDs:CG12758-RA, FlyBase+Annotation+IDs:CG12758-RC, FlyBase+Annotation+IDs:CG12758-RD" - - - - -	7029	14,470,540 – 14,470,660	+	6	120	87.61	-2.47	0.77	0.574140
4396	2R_DroMel_CAF1	14,470,540 – 14,470,700		7030	14,470,580 – 14,470,700	+	6	120	88.67	-1.84	0.82	0.554277
4397	2R_DroMel_CAF1	14,471,421 – 14,471,535	- - - "knownCDS=Parent=FBtr0086566, FBtr0086567, FBtr0086568, FBtr0086569;Name=sano-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12758-RB, FlyBase+Annotation+IDs:CG12758-RA, FlyBase+Annotation+IDs:CG12758-RC, FlyBase+Annotation+IDs:CG12758-RD" - - - - -	7031	14,471,421 – 14,471,535	+	6	120	81.25	-1.54	0.63	0.507902
4398	2R_DroMel_CAF1	14,476,072 – 14,476,163	- - - - - - - - -	7032	14,476,072 – 14,476,163	+	5	112	67.12	-1.58	0.50	0.597187
4399	2R_DroMel_CAF1	14,477,043 – 14,477,134	- - - - - - - - -	7033	14,477,043 – 14,477,134	-	6	95	85.96	-2.52	0.84	0.924455
4400	2R_DroMel_CAF1	14,478,232 – 14,478,323	- - - - - - - - -	7034	14,478,232 – 14,478,323	+	3	101	70.76	-1.08	0.79	0.905943
4401	2R_DroMel_CAF1	14,479,605 – 14,479,706	- - - - - - - - -	7035	14,479,605 – 14,479,706	+	5	101	88.12	-2.81	0.79	0.992475
4401	2R_DroMel_CAF1	14,479,605 – 14,479,706	- - - - - - - - -	7036	14,479,605 – 14,479,706	-	5	101	88.12	-2.84	0.74	0.971181
4402	2R_DroMel_CAF1	14,479,871 – 14,479,965	- - - - - - - - -	7037	14,479,871 – 14,479,965	-	3	106	66.01	-0.58	0.82	0.822616
4403	2R_DroMel_CAF1	14,480,458 – 14,480,559	- - - - - - - - -	7038	14,480,458 – 14,480,559	-	4	104	88.41	-1.78	0.71	0.653527
4404	2R_DroMel_CAF1	14,482,014 – 14,482,115	- - - - - - - - -	7039	14,482,014 – 14,482,115	+	6	106	78.18	-2.92	0.54	0.982795
4404	2R_DroMel_CAF1	14,482,014 – 14,482,115	- - - - - - - - -	7040	14,482,014 – 14,482,115	-	6	106	78.18	-2.88	0.51	0.975670
4405	2R_DroMel_CAF1	14,483,273 – 14,483,386	- - - - - - - - -	7041	14,483,273 – 14,483,386	+	6	117	81.39	-2.65	0.70	0.912716
4405	2R_DroMel_CAF1	14,483,273 – 14,483,386	- - - - - - - - -	7042	14,483,273 – 14,483,386	-	6	117	81.39	-1.56	0.64	0.554489
4406	2R_DroMel_CAF1	14,486,024 – 14,486,131	- - - - - - - - -	7043	14,486,024 – 14,486,131	+	5	107	84.40	-1.95	0.67	0.696613
4407	2R_DroMel_CAF1	14,487,864 – 14,488,003	- - - - - - - - -	7044	14,487,864 – 14,487,965	+	6	103	75.61	-2.01	0.51	0.860085
4407	2R_DroMel_CAF1	14,487,864 – 14,488,003	- - - - - - - - -	7045	14,487,902 – 14,488,003	-	6	103	77.18	-2.49	0.55	0.969761
4408	2R_DroMel_CAF1	14,489,709 – 14,489,826	- - - "knownCDS=Parent=FBtr0086570;Name=Topors-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15104-RA" - - - - -	7046	14,489,709 – 14,489,826	+	6	117	76.68	-1.63	0.61	0.787139
4409	2R_DroMel_CAF1	14,493,775 – 14,493,875	- - - "knownCDS=Parent=FBtr0086571;Name=CG18605-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18605-RA" - - - - -	7047	14,493,775 – 14,493,875	+	5	118	75.42	-1.80	0.55	0.737769
4410	2R_DroMel_CAF1	14,496,200 – 14,496,351	- - - - - - - - -	7048	14,496,200 – 14,496,312	+	6	113	81.26	-2.71	0.64	0.904702
				7049	14,496,200 – 14,496,312	-	6	113	81.26	-3.11	0.59	0.928032
				7050	14,496,238 – 14,496,351	-	6	115	83.87	-2.32	0.63	0.506987
4411	2R_DroMel_CAF1	14,504,807 – 14,504,972	- - - - - - - - -	7051	14,504,807 – 14,504,910	-	6	107	79.08	-1.86	0.53	0.538374
4411	2R_DroMel_CAF1	14,504,807 – 14,504,972	- - - - - - - - -	7052	14,504,873 – 14,504,972	+	3	102	69.86	-1.21	0.62	0.522523
4412	2R_DroMel_CAF1	14,509,380 – 14,509,475	- - - - - - - - -	7053	14,509,380 – 14,509,475	+	6	110	81.57	-1.33	0.74	0.583205
4412	2R_DroMel_CAF1	14,509,380 – 14,509,475	- - - - - - - - -	7054	14,509,380 – 14,509,475	-	6	110	81.57	-1.62	0.67	0.622549
4413	2R_DroMel_CAF1	14,515,196 – 14,515,298	- - - - - - - - -	7055	14,515,196 – 14,515,298	+	6	110	72.89	-2.58	0.41	0.987145
4413	2R_DroMel_CAF1	14,515,196 – 14,515,298	- - - - - - - - -	7056	14,515,196 – 14,515,298	-	6	110	72.89	-2.30	0.40	0.941616
4414	2R_DroMel_CAF1	14,518,788 – 14,518,887	- - - - - - - - -	7057	14,518,788 – 14,518,887	-	6	104	78.54	-2.73	0.40	0.842911
4415	2R_DroMel_CAF1	14,521,100 – 14,521,220	- - - "knownCDS=Parent=FBtr0086572, FBtr0086573;Name=CG15105-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15105-RB, FlyBase+Annotation+IDs:CG15105-RA" - - - - -	7058	14,521,100 – 14,521,220	+	6	120	93.90	-2.30	0.87	0.981077
4415	2R_DroMel_CAF1	14,521,100 – 14,521,220		7059	14,521,100 – 14,521,220	-	6	120	93.90	-0.97	0.92	0.544978
4416	2R_DroMel_CAF1	14,522,039 – 14,522,140	- - - - - - - - -	7060	14,522,039 – 14,522,140	-	6	116	82.01	-2.30	0.62	0.733836
4417	2R_DroMel_CAF1	14,522,427 – 14,522,582	- - - "knownCDS=Parent=FBtr0086572, FBtr0086573;Name=CG15105-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15105-RB, FlyBase+Annotation+IDs:CG15105-RA" - - - - -	7061	14,522,427 – 14,522,542	+	6	120	84.11	-1.70	0.78	0.583210
4417	2R_DroMel_CAF1	14,522,427 – 14,522,582		7062	14,522,462 – 14,522,582	-	6	120	94.06	-1.00	0.94	0.730944
4418	2R_DroMel_CAF1	14,523,558 – 14,523,652	- - - "knownCDS=Parent=FBtr0086572, FBtr0086573;Name=CG15105-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15105-RB, FlyBase+Annotation+IDs:CG15105-RA" - - - - -	7063	14,523,558 – 14,523,652	+	6	96	80.31	-1.94	0.54	0.548275
4419	2R_DroMel_CAF1	14,524,173 – 14,524,306	- - - - - - - - -	7064	14,524,173 – 14,524,267	+	6	100	81.97	-2.85	0.85	0.962743
				7065	14,524,173 – 14,524,267	-	6	100	81.97	-2.42	0.72	0.865019
				7066	14,524,201 – 14,524,306	+	6	116	76.97	-3.05	0.49	0.991679
				7067	14,524,201 – 14,524,306	-	6	116	76.97	-1.67	0.59	0.749227
4420	2R_DroMel_CAF1	14,525,029 – 14,525,119	- - - - - - - - -	7068	14,525,029 – 14,525,119	+	6	114	75.03	-2.11	0.46	0.859531
4421	2R_DroMel_CAF1	14,527,430 – 14,527,571	- - - - - - - - -	7069	14,527,430 – 14,527,540	-	6	117	76.64	-1.89	0.47	0.535910
4421	2R_DroMel_CAF1	14,527,430 – 14,527,571	- - - - - - - - -	7070	14,527,465 – 14,527,571	-	6	117	82.00	-2.01	0.58	0.519631
4422	2R_DroMel_CAF1	14,532,948 – 14,533,056	- - - - - - - - -	7071	14,532,948 – 14,533,056	+	6	113	81.58	-1.72	0.60	0.500000
4423	2R_DroMel_CAF1	14,533,817 – 14,533,932	- - - - - - - - -	7072	14,533,817 – 14,533,932	-	5	115	94.52	-1.62	0.93	0.983854
4424	2R_DroMel_CAF1	14,540,559 – 14,540,650	- - - - - - - - -	7073	14,540,559 – 14,540,650	-	5	96	80.22	-2.19	0.67	0.937178
4425	2R_DroMel_CAF1	14,540,805 – 14,540,903	- - - "knownCDS=Parent=FBtr0086599;Name=5-HT1B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15113-RA" - - - - -	7074	14,540,805 – 14,540,903	-	6	104	75.27	-2.59	0.73	0.991092
4426	2R_DroMel_CAF1	14,542,579 – 14,542,687	- - - - - - - - -	7075	14,542,579 – 14,542,687	+	6	115	80.85	-1.19	0.69	0.500000
4427	2R_DroMel_CAF1	14,543,620 – 14,543,764	- - - "knownCDS=Parent=FBtr0086599;Name=5-HT1B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15113-RA" - - - - -	7076	14,543,620 – 14,543,726	+	6	115	82.45	-2.16	0.65	0.698913
4427	2R_DroMel_CAF1	14,543,620 – 14,543,764		7077	14,543,653 – 14,543,764	+	6	116	82.37	-1.88	0.68	0.664206
4428	2R_DroMel_CAF1	14,550,278 – 14,550,382	- - - - - - - - -	7078	14,550,278 – 14,550,382	+	5	104	89.71	-1.79	0.82	0.902924
4429	2R_DroMel_CAF1	14,554,793 – 14,554,883	- - - - - - - - -	7079	14,554,793 – 14,554,883	+	5	90	77.51	-1.67	0.74	0.879756
4430	2R_DroMel_CAF1	14,563,032 – 14,563,123	- - - - - - - - -	7080	14,563,032 – 14,563,123	-	5	91	87.80	-1.33	0.87	0.518419
4431	2R_DroMel_CAF1	14,566,965 – 14,567,093	- - - - - - - - -	7081	14,566,965 – 14,567,072	+	5	107	96.82	-2.18	0.98	0.999631
				7082	14,566,965 – 14,567,072	-	5	107	96.82	-1.56	1.00	0.986434
				7083	14,566,992 – 14,567,093	+	5	101	96.24	-1.92	0.92	0.995797
4432	2R_DroMel_CAF1	14,568,947 – 14,569,053	- - - - - - - - -	7084	14,568,947 – 14,569,053	+	6	113	80.17	-1.37	0.85	0.751211
4433	2R_DroMel_CAF1	14,574,297 – 14,574,394	- - - - - - - - -	7085	14,574,297 – 14,574,394	-	6	102	80.91	-1.47	0.70	0.660008
4434	2R_DroMel_CAF1	14,574,837 – 14,574,928	- - - "knownCDS=Parent=FBtr0086574;Name=CG15109-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15109-RC" - - - - -	7086	14,574,837 – 14,574,928	+	5	94	92.62	-2.47	0.90	0.999604
4434	2R_DroMel_CAF1	14,574,837 – 14,574,928		7087	14,574,837 – 14,574,928	-	5	94	92.62	-1.38	0.86	0.758744
4435	2R_DroMel_CAF1	14,576,418 – 14,576,525	- - - - - - - - -	7088	14,576,418 – 14,576,525	+	6	109	83.28	-2.34	0.68	0.690247
4435	2R_DroMel_CAF1	14,576,418 – 14,576,525	- - - - - - - - -	7089	14,576,418 – 14,576,525	-	6	109	83.28	-2.10	0.65	0.573814
4436	2R_DroMel_CAF1	14,578,318 – 14,578,428	- - - - - - - - -	7090	14,578,318 – 14,578,428	-	6	115	73.03	-2.00	0.36	0.611068
4437	2R_DroMel_CAF1	14,587,053 – 14,587,146	- - - - - - - - -	7091	14,587,053 – 14,587,146	+	5	93	83.75	-1.63	0.84	0.703187
4438	2R_DroMel_CAF1	14,588,163 – 14,588,270	- - - - - - - - -	7092	14,588,163 – 14,588,270	-	6	108	81.56	-3.09	0.65	0.927953
4439	2R_DroMel_CAF1	14,597,478 – 14,597,588	- - - - - - - - -	7093	14,597,478 – 14,597,569	+	5	91	92.62	-1.43	0.85	0.779842
				7094	14,597,478 – 14,597,569	-	5	91	92.62	-1.14	0.91	0.584023
				7095	14,597,498 – 14,597,588	+	5	90	84.36	-1.70	0.79	0.710537
4440	2R_DroMel_CAF1	14,598,124 – 14,598,218	- - - - - - - - -	7096	14,598,124 – 14,598,218	+	6	105	80.49	-1.42	0.69	0.652838
4440	2R_DroMel_CAF1	14,598,124 – 14,598,218	- - - - - - - - -	7097	14,598,124 – 14,598,218	-	6	105	80.49	-2.48	0.45	0.540750
4441	2R_DroMel_CAF1	14,602,976 – 14,603,073	- - - - - - - - -	7098	14,602,976 – 14,603,073	+	5	108	90.29	-1.30	0.86	0.597314
4442	2R_DroMel_CAF1	14,603,138 – 14,603,233	- - - - - - - - -	7099	14,603,138 – 14,603,233	+	5	95	93.07	-2.06	0.73	0.551524
4443	2R_DroMel_CAF1	14,605,911 – 14,606,020	- - - "knownCDS=Parent=FBtr0086578;Name=5-HT1A-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16720-RA" - - - - -	7100	14,605,911 – 14,606,020	+	6	120	81.78	-1.41	0.68	0.534868
4443	2R_DroMel_CAF1	14,605,911 – 14,606,020		7101	14,605,911 – 14,606,020	-	6	120	81.78	-1.99	0.83	0.877448
4444	2R_DroMel_CAF1	14,611,223 – 14,611,334	- - - - - - - - -	7102	14,611,223 – 14,611,334	+	6	113	81.55	-1.59	0.81	0.752217
4445	2R_DroMel_CAF1	14,612,499 – 14,612,606	- - - - - - - - -	7103	14,612,499 – 14,612,606	+	6	114	78.02	-1.26	0.63	0.509909
4446	2R_DroMel_CAF1	14,620,993 – 14,621,105	- - - - - - - - -	7104	14,620,993 – 14,621,105	-	6	117	75.42	-2.29	0.55	0.973671
4447	2R_DroMel_CAF1	14,622,466 – 14,622,586	- - - - - - - - -	7105	14,622,466 – 14,622,586	+	3	120	93.33	-2.28	0.89	0.846866
4447	2R_DroMel_CAF1	14,622,466 – 14,622,586	- - - - - - - - -	7106	14,622,466 – 14,622,586	-	3	120	93.33	-2.60	0.84	0.823290
4448	2R_DroMel_CAF1	14,623,815 – 14,623,911	- - - - - - - - -	7107	14,623,815 – 14,623,911	-	6	101	78.61	-2.88	0.70	0.979905
4449	2R_DroMel_CAF1	14,629,540 – 14,629,634	- - - - - - - - -	7108	14,629,540 – 14,629,634	+	6	113	77.98	-2.94	0.51	0.982202
4450	2R_DroMel_CAF1	14,632,070 – 14,632,174	- - - - - - - - -	7109	14,632,070 – 14,632,174	-	3	105	90.26	-1.86	0.87	0.665178
4451	2R_DroMel_CAF1	14,638,746 – 14,638,928	- - - "knownCDS=Parent=FBtr0086594, FBtr0086593, FBtr0100129;Name=CG15117-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15117-RB, FlyBase+Annotation+IDs:CG15117-RA, FlyBase+Annotation+IDs:CG15117-RC" - - - - -	7110	14,638,746 – 14,638,866	-	6	120	72.78	-1.73	0.48	0.655361
				7111	14,638,786 – 14,638,902	-	6	120	78.92	-1.71	0.56	0.546740
				7112	14,638,826 – 14,638,928	-	6	115	74.76	-1.76	0.62	0.930357
4452	2R_DroMel_CAF1	14,639,868 – 14,639,969	- - - - - - - - -	7113	14,639,868 – 14,639,969	-	5	101	90.99	-2.16	0.79	0.955596
4453	2R_DroMel_CAF1	14,644,384 – 14,644,481	- - - - - - - - -	7114	14,644,384 – 14,644,481	+	5	97	84.64	-1.89	0.73	0.761225
4454	2R_DroMel_CAF1	14,649,073 – 14,649,178	- - - "knownCDS=Parent=FBtr0086589, FBtr0086590, FBtr0086591, FBtr0086592;Name=CG15118-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15118-RC, FlyBase+Annotation+IDs:CG15118-RA, FlyBase+Annotation+IDs:CG15118-RB, FlyBase+Annotation+IDs:CG15118-RD" - - - - -	7115	14,649,073 – 14,649,178	-	6	115	77.97	-1.62	0.57	0.575696
4455	2R_DroMel_CAF1	14,649,376 – 14,649,519	- - - - - - - - -	7116	14,649,376 – 14,649,485	-	6	116	76.30	-1.91	0.70	0.965901
4455	2R_DroMel_CAF1	14,649,376 – 14,649,519	- - - - - - - - -	7117	14,649,408 – 14,649,519	+	6	111	81.80	-2.16	0.72	0.835292
4456	2R_DroMel_CAF1	14,649,620 – 14,649,759	- - - - - - - - -	7118	14,649,620 – 14,649,726	+	3	118	67.54	-3.75	0.64	1.000000
				7119	14,649,620 – 14,649,726	-	3	118	67.54	-3.73	0.53	0.999988
				7120	14,649,658 – 14,649,759	+	5	113	67.01	-3.42	0.69	0.999253
				7121	14,649,658 – 14,649,759	-	5	113	67.01	-2.55	0.65	0.998248
4457	2R_DroMel_CAF1	14,659,185 – 14,659,297	- - - - - - - - -	7122	14,659,185 – 14,659,297	-	5	115	91.34	-1.45	0.79	0.578822
4458	2R_DroMel_CAF1	14,664,433 – 14,664,540	- - - - - - - - -	7123	14,664,433 – 14,664,540	-	5	109	93.22	-1.20	0.91	0.707486
4459	2R_DroMel_CAF1	14,665,536 – 14,665,760	- - - - - - - - -	7124	14,665,536 – 14,665,628	+	4	119	81.51	-1.94	0.63	0.737341
				7125	14,665,536 – 14,665,628	-	4	119	81.51	-3.49	0.60	0.994630
				7126	14,665,575 – 14,665,668	-	4	120	77.13	-2.35	0.68	0.991135
				7127	14,665,668 – 14,665,760	+	5	92	94.23	-1.21	0.86	0.514007
				7128	14,665,668 – 14,665,760	-	5	92	94.23	-2.50	0.83	0.994985
4460	2R_DroMel_CAF1	14,667,316 – 14,667,423	- - - - - - - - -	7129	14,667,316 – 14,667,423	+	4	111	92.01	-3.44	0.73	0.776077
4460	2R_DroMel_CAF1	14,667,316 – 14,667,423	- - - - - - - - -	7130	14,667,316 – 14,667,423	-	4	111	92.01	-2.82	0.74	0.797341
4461	2R_DroMel_CAF1	14,669,693 – 14,669,800	- - - - - - - - -	7131	14,669,693 – 14,669,800	+	4	119	87.06	-1.57	0.73	0.612670
4462	2R_DroMel_CAF1	14,675,431 – 14,675,624	- - - "knownCDS=Parent=FBtr0100174;Name=ena-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15112-RD" - - - - -	7132	14,675,431 – 14,675,546	+	6	115	74.28	-2.56	0.60	0.993837
				7133	14,675,431 – 14,675,546	-	6	115	74.28	-1.95	0.63	0.970893
				7134	14,675,466 – 14,675,584	+	4	118	96.05	-1.58	0.95	0.692617
				7135	14,675,506 – 14,675,624	+	6	118	74.56	-1.28	0.60	0.508586
				7136	14,675,506 – 14,675,624	-	6	118	74.56	-1.19	0.64	0.610315
4463	2R_DroMel_CAF1	14,678,077 – 14,678,169	- - - - - - - - -	7137	14,678,077 – 14,678,169	-	6	98	81.27	-1.77	0.66	0.701370
4464	2R_DroMel_CAF1	14,678,862 – 14,678,992	- - - - - - - - -	7138	14,678,862 – 14,678,967	+	4	118	77.59	-1.56	0.69	0.590496
				7139	14,678,862 – 14,678,967	-	4	118	77.59	-1.72	0.80	0.894829
				7140	14,678,887 – 14,678,992	+	5	115	84.25	-2.02	0.69	0.766657
4465	2R_DroMel_CAF1	14,679,711 – 14,679,837	- - - - - - - - -	7141	14,679,711 – 14,679,811	+	5	105	95.10	-3.48	0.91	0.999942
				7142	14,679,711 – 14,679,811	-	5	105	95.10	-2.05	0.79	0.867410
				7143	14,679,733 – 14,679,837	+	5	106	95.61	-1.30	0.89	0.743618
4466	2R_DroMel_CAF1	14,686,405 – 14,686,560	- - - - - - - - -	7144	14,686,405 – 14,686,497	-	6	94	82.37	-1.95	0.64	0.609620
				7145	14,686,422 – 14,686,531	-	6	114	84.30	-2.10	0.71	0.572245
				7146	14,686,460 – 14,686,560	-	6	115	85.65	-2.27	0.78	0.668335
4467	2R_DroMel_CAF1	14,689,963 – 14,690,053	- - - "knownCDS=Parent=FBtr0086585;Name=CG10737-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10737-RD" - - - - -	7147	14,689,963 – 14,690,053	+	6	90	81.61	-1.75	0.75	0.769855
4468	2R_DroMel_CAF1	14,691,002 – 14,691,104	- - - - - - - - -	7148	14,691,002 – 14,691,104	+	6	116	78.00	-1.61	0.75	0.909300
4469	2R_DroMel_CAF1	14,695,167 – 14,695,274	- - - - - - - - -	7149	14,695,167 – 14,695,274	+	5	107	86.82	-2.34	0.83	0.983953
4470	2R_DroMel_CAF1	14,695,726 – 14,695,873	- - - - - - - - -	7150	14,695,726 – 14,695,846	-	6	120	81.79	-2.20	0.55	0.545334
4470	2R_DroMel_CAF1	14,695,726 – 14,695,873	- - - - - - - - -	7151	14,695,766 – 14,695,873	-	5	107	87.78	-1.53	0.74	0.510074
4471	2R_DroMel_CAF1	14,696,536 – 14,696,628	- - - - - - - - -	7152	14,696,536 – 14,696,628	+	4	100	87.39	-2.34	0.87	0.975598
4471	2R_DroMel_CAF1	14,696,536 – 14,696,628	- - - - - - - - -	7153	14,696,536 – 14,696,628	-	4	100	87.39	-2.08	0.70	0.782216
4472	2R_DroMel_CAF1	14,698,152 – 14,698,279	- - - - - - - - -	7154	14,698,152 – 14,698,244	+	5	98	95.34	-1.72	0.88	0.965102
				7155	14,698,152 – 14,698,244	-	5	98	95.34	-1.96	0.87	0.985585
				7156	14,698,182 – 14,698,279	+	5	108	85.71	-2.33	0.76	0.943413
4473	2R_DroMel_CAF1	14,701,764 – 14,701,854	- - - - - - - - -	7157	14,701,764 – 14,701,854	+	3	90	93.56	-1.55	0.94	0.596930
4474	2R_DroMel_CAF1	14,703,426 – 14,703,568	- - - - - - - - -	7158	14,703,426 – 14,703,543	+	5	117	77.46	-1.79	0.50	0.509682
4474	2R_DroMel_CAF1	14,703,426 – 14,703,568	- - - - - - - - -	7159	14,703,463 – 14,703,568	+	3	105	79.94	-0.89	0.90	0.764717
4475	2R_DroMel_CAF1	14,705,002 – 14,705,095	- - - - - - - - -	7160	14,705,002 – 14,705,095	-	5	94	98.29	-1.14	0.99	0.577910
4476	2R_DroMel_CAF1	14,711,574 – 14,711,673	- - - - - - - - -	7161	14,711,574 – 14,711,673	-	5	99	97.17	-1.25	0.90	0.599542
4477	2R_DroMel_CAF1	14,723,964 – 14,724,054	- - - - - - - - -	7162	14,723,964 – 14,724,054	-	3	90	96.28	-2.41	0.95	0.949952
4478	2R_DroMel_CAF1	14,730,511 – 14,730,620	- - - "knownCDS=texon10687;Parent=CG_RGUI_GID_mRNA_40003902, CG_DGIL_SNO_28357255" - - - - -	7163	14,730,511 – 14,730,620	+	5	115	91.65	-1.59	0.82	0.813312
4479	2R_DroMel_CAF1	14,736,167 – 14,736,289	- - - - - - - - -	7164	14,736,167 – 14,736,262	+	5	104	82.05	-2.91	0.67	0.988040
4479	2R_DroMel_CAF1	14,736,167 – 14,736,289	- - - - - - - - -	7165	14,736,194 – 14,736,289	+	5	96	86.16	-2.61	0.64	0.813075
4480	2R_DroMel_CAF1	14,740,760 – 14,740,851	- - - "knownCDS=Parent=FBtr0086503;Name=CG7097-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7097-RB" - - - - -	7166	14,740,760 – 14,740,851	-	6	94	83.47	-2.01	0.71	0.629084
4481	2R_DroMel_CAF1	14,742,749 – 14,742,869	- - - "knownCDS=Parent=FBtr0086505;Name=CG7137-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7137-RA" - - - - -	7167	14,742,749 – 14,742,869	+	6	120	78.00	-1.68	0.58	0.666683
4482	2R_DroMel_CAF1	14,747,352 – 14,747,443	- - - - - - - - -	7168	14,747,352 – 14,747,443	+	6	98	81.18	-1.27	0.80	0.608432
4483	2R_DroMel_CAF1	14,753,126 – 14,753,216	- - - - - - - - -	7169	14,753,126 – 14,753,216	+	6	94	79.42	-1.20	0.71	0.622208
4484	2R_DroMel_CAF1	14,755,323 – 14,755,443	- - - "knownCDS=Parent=FBtr0086509;Name=cora-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11949-RA" - - - - -	7170	14,755,323 – 14,755,443	+	6	120	80.72	-2.93	0.62	0.938810
4484	2R_DroMel_CAF1	14,755,323 – 14,755,443		7171	14,755,323 – 14,755,443	-	6	120	80.72	-1.58	0.62	0.550977
4485	2R_DroMel_CAF1	14,756,474 – 14,756,570	- - - "knownCDS=Parent=FBtr0086508;Name=cora-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11949-RB" - - - - -	7172	14,756,474 – 14,756,570	+	6	108	78.02	-2.23	0.50	0.837767
4486	2R_DroMel_CAF1	14,760,040 – 14,760,160	- - - - - - - - -	7173	14,760,040 – 14,760,160	-	3	120	94.44	-2.39	0.78	0.545857
4487	2R_DroMel_CAF1	14,760,807 – 14,760,906	- - - - - - - - -	7174	14,760,807 – 14,760,906	-	3	120	68.31	-1.18	0.65	0.728062
4488	2R_DroMel_CAF1	14,761,447 – 14,761,559	- - - - - - - - -	7175	14,761,447 – 14,761,559	+	3	120	81.82	-2.09	0.82	0.935215
4489	2R_DroMel_CAF1	14,761,637 – 14,761,797	- - - - - - - - -	7176	14,761,637 – 14,761,757	+	3	120	87.57	-2.72	0.83	0.930145
				7177	14,761,637 – 14,761,757	-	3	120	87.57	-1.64	0.86	0.585442
				7178	14,761,677 – 14,761,797	+	3	120	88.14	-4.82	0.88	0.957902
				7179	14,761,677 – 14,761,797	-	3	120	88.14	-4.15	0.90	0.982499
4490	2R_DroMel_CAF1	14,761,876 – 14,762,026	- - - - - - - - -	7180	14,761,876 – 14,761,987	+	3	120	88.00	-2.23	0.74	0.620648
				7181	14,761,876 – 14,761,987	-	3	120	88.00	-3.20	0.74	0.900102
				7182	14,761,907 – 14,762,026	+	3	120	96.09	-2.09	0.91	0.802652
4491	2R_DroMel_CAF1	14,762,106 – 14,762,299	- - - - - - - - -	7183	14,762,106 – 14,762,219	+	3	120	92.09	-3.47	0.97	0.994492
				7184	14,762,106 – 14,762,219	-	3	120	92.09	-2.19	0.85	0.731223
				7185	14,762,139 – 14,762,259	+	3	120	99.44	-3.94	1.00	0.989399
				7186	14,762,139 – 14,762,259	-	3	120	99.44	-3.50	0.98	0.988948
				7187	14,762,179 – 14,762,299	+	3	120	96.38	-4.10	0.92	0.973231
				7188	14,762,179 – 14,762,299	-	3	120	96.38	-4.03	0.92	0.972365
4492	2R_DroMel_CAF1	14,763,207 – 14,763,406	- - - - - - - - -	7189	14,763,207 – 14,763,326	+	3	120	94.43	-2.37	0.90	0.886182
				7190	14,763,207 – 14,763,326	-	3	120	94.43	-1.49	0.94	0.500000
				7191	14,763,247 – 14,763,366	+	3	120	92.11	-3.48	0.85	0.949916
				7192	14,763,247 – 14,763,366	-	3	120	92.11	-2.37	0.86	0.826256
				7193	14,763,286 – 14,763,406	-	3	120	92.13	-1.95	0.86	0.617697
4493	2R_DroMel_CAF1	14,764,530 – 14,764,683	- - - - - - - - -	7194	14,764,530 – 14,764,645	+	3	120	78.59	-2.23	0.54	0.547094
4493	2R_DroMel_CAF1	14,764,530 – 14,764,683	- - - - - - - - -	7195	14,764,565 – 14,764,683	-	3	120	79.89	-1.46	0.74	0.577735
4494	2R_DroMel_CAF1	14,768,420 – 14,768,538	- - - - - - - - -	7196	14,768,420 – 14,768,538	+	5	120	93.71	-1.94	0.89	0.994788
4495	2R_DroMel_CAF1	14,768,772 – 14,768,864	- - - - - - - - -	7197	14,768,772 – 14,768,864	+	5	92	81.61	-2.25	0.54	0.772292
4495	2R_DroMel_CAF1	14,768,772 – 14,768,864	- - - - - - - - -	7198	14,768,772 – 14,768,864	-	5	92	81.61	-2.12	0.66	0.873504
4496	2R_DroMel_CAF1	14,770,667 – 14,770,761	- - - - - - - - -	7199	14,770,667 – 14,770,761	-	5	99	92.05	-1.71	0.89	0.977833
4497	2R_DroMel_CAF1	14,775,453 – 14,775,558	- - - "knownCDS=Parent=FBtr0086511;Name=CG7229-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7229-RA" - - - - -	7200	14,775,453 – 14,775,558	+	6	114	73.44	-2.15	0.55	0.974898
4498	2R_DroMel_CAF1	14,780,749 – 14,780,842	- - - - - - - - -	7201	14,780,749 – 14,780,842	-	5	95	95.52	-1.71	0.91	0.983621
4499	2R_DroMel_CAF1	14,781,141 – 14,781,231	- - - - - - - - -	7202	14,781,141 – 14,781,231	+	6	107	80.35	-1.75	0.57	0.535912
4500	2R_DroMel_CAF1	14,783,763 – 14,783,893	- - - - - - - - -	7203	14,783,763 – 14,783,866	+	5	113	83.36	-1.82	0.68	0.661121
				7204	14,783,788 – 14,783,893	+	5	118	79.22	-2.59	0.58	0.982696
				7205	14,783,788 – 14,783,893	-	5	118	79.22	-2.56	0.46	0.959709
4501	2R_DroMel_CAF1	14,785,982 – 14,786,086	- - - - - - - - -	7206	14,785,982 – 14,786,086	-	3	108	94.38	-1.89	0.90	0.658877
4502	2R_DroMel_CAF1	14,792,718 – 14,792,855	- - - - - - - - -	7207	14,792,718 – 14,792,821	-	6	107	82.25	-1.42	0.71	0.540118
4502	2R_DroMel_CAF1	14,792,718 – 14,792,855	- - - - - - - - -	7208	14,792,741 – 14,792,855	-	6	120	81.08	-1.35	0.67	0.540793
4503	2R_DroMel_CAF1	14,796,489 – 14,796,584	- - - "knownCDS=Parent=FBtr0086563;Name=CG11906-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11906-RA" - - - - -	7209	14,796,489 – 14,796,584	-	6	114	73.43	-1.68	0.48	0.547251
4504	2R_DroMel_CAF1	14,798,457 – 14,798,562	- - - "knownCDS=Parent=FBtr0086563;Name=CG11906-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11906-RA" - - - - -	7210	14,798,457 – 14,798,562	-	6	105	80.92	-1.40	0.69	0.613869
4505	2R_DroMel_CAF1	14,804,436 – 14,804,556	- - - "knownCDS=Parent=FBtr0086514;Name=CG18607-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18607-RA" - - - - -	7211	14,804,436 – 14,804,556	-	4	120	94.58	-1.49	0.89	0.577314
4506	2R_DroMel_CAF1	14,805,087 – 14,805,212	- - - - - - - - -	7212	14,805,087 – 14,805,184	+	4	97	89.35	-2.38	0.78	0.922036
				7213	14,805,087 – 14,805,184	-	4	97	89.35	-2.79	0.86	0.990440
				7214	14,805,113 – 14,805,212	+	4	101	90.92	-2.77	0.94	0.996498
				7215	14,805,113 – 14,805,212	-	4	101	90.92	-2.09	0.90	0.963259
4507	2R_DroMel_CAF1	14,807,769 – 14,807,927	- - - - - - - - -	7216	14,807,769 – 14,807,887	+	5	120	91.79	-4.50	0.87	0.999851
				7217	14,807,769 – 14,807,887	-	5	120	91.79	-3.87	0.86	0.999846
				7218	14,807,809 – 14,807,927	+	5	120	93.80	-3.40	0.96	0.999992
				7219	14,807,809 – 14,807,927	-	5	120	93.80	-3.86	0.84	0.999450
4508	2R_DroMel_CAF1	14,808,120 – 14,808,276	- - - - - - - - -	7220	14,808,120 – 14,808,236	+	5	120	96.09	-2.76	0.90	0.999729
				7221	14,808,120 – 14,808,236	-	5	120	96.09	-2.25	0.96	0.999700
				7222	14,808,160 – 14,808,276	+	5	120	95.92	-2.09	0.90	0.996405
				7223	14,808,160 – 14,808,276	-	5	120	95.92	-1.32	0.89	0.736009
4509	2R_DroMel_CAF1	14,809,277 – 14,809,391	- - - - - - - - -	7224	14,809,277 – 14,809,391	-	5	120	76.79	-2.01	0.45	0.797701
4510	2R_DroMel_CAF1	14,809,589 – 14,809,698	- - - - - - - - -	7225	14,809,589 – 14,809,698	-	5	120	86.64	-1.64	0.80	0.694577
4511	2R_DroMel_CAF1	14,809,883 – 14,810,042	- - - - - - - - -	7226	14,809,883 – 14,810,002	+	5	120	97.49	-2.08	0.94	0.997540
				7227	14,809,883 – 14,810,002	-	5	120	97.49	-2.05	0.90	0.992196
				7228	14,809,922 – 14,810,042	+	5	120	98.33	-2.49	0.96	0.999547
				7229	14,809,922 – 14,810,042	-	5	120	98.33	-1.96	0.93	0.990094
4512	2R_DroMel_CAF1	14,810,976 – 14,811,096	- - - - - - - - -	7230	14,810,976 – 14,811,096	-	5	120	92.06	-1.88	0.82	0.938439
4513	2R_DroMel_CAF1	14,811,757 – 14,811,858	- - - - - - - - -	7231	14,811,757 – 14,811,858	+	5	119	82.90	-1.75	0.62	0.500000
4514	2R_DroMel_CAF1	14,812,208 – 14,812,328	- - - - - - - - -	7232	14,812,208 – 14,812,328	+	5	120	91.50	-1.60	0.81	0.799586
4514	2R_DroMel_CAF1	14,812,208 – 14,812,328	- - - - - - - - -	7233	14,812,208 – 14,812,328	-	5	120	91.50	-1.51	0.77	0.548298
4515	2R_DroMel_CAF1	14,812,408 – 14,812,528	- - - - - - - - -	7234	14,812,408 – 14,812,528	-	5	120	95.92	-1.20	0.89	0.564000
4516	2R_DroMel_CAF1	14,812,562 – 14,812,716	- - - - - - - - -	7235	14,812,562 – 14,812,679	+	3	120	83.29	-1.54	1.04	0.998697
				7236	14,812,562 – 14,812,679	-	3	120	83.29	-1.83	0.95	0.980214
				7237	14,812,599 – 14,812,716	+	5	120	94.28	-1.79	0.93	0.995101
				7238	14,812,599 – 14,812,716	-	5	120	94.28	-1.69	0.86	0.948894
4517	2R_DroMel_CAF1	14,812,756 – 14,812,913	- - - - - - - - -	7239	14,812,756 – 14,812,873	+	5	120	83.70	-2.49	0.57	0.785456
				7240	14,812,796 – 14,812,913	+	5	120	75.44	-1.98	0.50	0.854276
				7241	14,812,796 – 14,812,913	-	5	120	75.44	-2.10	0.35	0.918946
4518	2R_DroMel_CAF1	14,813,072 – 14,813,268	- - - - - - - - -	7242	14,813,072 – 14,813,192	-	5	120	90.40	-2.57	0.67	0.530331
4518	2R_DroMel_CAF1	14,813,072 – 14,813,268	- - - - - - - - -	7243	14,813,152 – 14,813,268	+	5	120	73.01	-2.22	0.27	0.978021
4519	2R_DroMel_CAF1	14,814,035 – 14,814,155	- - - "knownCDS=Parent=FBtr0086516;Name=Tab2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7417-RA" - - - - -	7244	14,814,035 – 14,814,155	+	5	120	98.00	-1.35	0.92	0.729657
4520	2R_DroMel_CAF1	14,814,229 – 14,814,589	- - - "knownCDS=Parent=FBtr0086516;Name=Tab2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7417-RA" - - - - -	7245	14,814,229 – 14,814,349	+	5	120	96.83	-2.39	0.97	0.999788
				7246	14,814,269 – 14,814,389	+	5	120	96.67	-1.67	0.95	0.987185
				7247	14,814,309 – 14,814,429	+	5	120	97.17	-2.25	0.88	0.994509
				7248	14,814,429 – 14,814,549	+	5	120	96.67	-2.01	0.91	0.995658
				7249	14,814,429 – 14,814,549	-	5	120	96.67	-2.37	0.95	0.999681
				7250	14,814,469 – 14,814,589	+	5	120	94.83	-1.96	0.87	0.987967
				7251	14,814,469 – 14,814,589	-	5	120	94.83	-1.47	0.96	0.973547
4521	2R_DroMel_CAF1	14,814,949 – 14,815,066	- - "RNAmicro=f:14814949_t:14815068_strand:-_p:0.575260" "knownCDS=Parent=FBtr0086516;Name=Tab2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7417-RA" - - - - -	7252	14,814,949 – 14,815,066	+	5	120	96.11	-2.35	0.97	0.999844
4521	2R_DroMel_CAF1	14,814,949 – 14,815,066		7253	14,814,949 – 14,815,066	-	5	120	96.11	-2.09	0.91	0.997771
4522	2R_DroMel_CAF1	14,815,546 – 14,815,706	- - - "knownCDS=Parent=FBtr0086516;Name=Tab2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7417-RA" - - - - -	7254	14,815,546 – 14,815,666	-	5	120	97.00	-1.40	0.93	0.891185
4522	2R_DroMel_CAF1	14,815,546 – 14,815,706		7255	14,815,586 – 14,815,706	-	5	120	93.17	-1.36	0.88	0.819533
4523	2R_DroMel_CAF1	14,817,278 – 14,817,398	- - - - - - - - -	7256	14,817,278 – 14,817,398	+	5	120	93.00	-2.08	0.83	0.979102
4524	2R_DroMel_CAF1	14,817,634 – 14,817,754	- - - "knownCDS=Parent=FBtr0086516;Name=Tab2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7417-RA" - - - - -	7257	14,817,634 – 14,817,754	-	5	120	97.33	-1.30	0.92	0.749114
4525	2R_DroMel_CAF1	14,818,378 – 14,818,538	- - "RNAmicro=f:14818378_t:14818497_strand:-_p:0.835394" "knownCDS=Parent=FBtr0086516;Name=Tab2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7417-RA" - - - - -	7258	14,818,378 – 14,818,498	+	5	120	93.65	-2.58	0.93	0.999921
				7259	14,818,378 – 14,818,498	-	5	120	93.65	-3.53	0.88	0.999888
				7260	14,818,418 – 14,818,538	-	5	120	92.44	-1.86	0.78	0.834166
4526	2R_DroMel_CAF1	14,819,526 – 14,819,634	- - - - - - - - -	7261	14,819,526 – 14,819,634	+	5	120	69.64	-1.82	0.22	0.643364
4527	2R_DroMel_CAF1	14,820,521 – 14,820,638	- - - "knownCDS=Parent=FBtr0086517;Name=CG7461-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7461-RA" - - - - -	7262	14,820,521 – 14,820,638	-	5	117	97.01	-1.29	0.94	0.810085
4528	2R_DroMel_CAF1	14,820,723 – 14,820,843	- - - "knownCDS=Parent=FBtr0086517;Name=CG7461-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7461-RA" - - - - -	7263	14,820,723 – 14,820,843	-	5	120	94.83	-1.82	0.89	0.988030
4529	2R_DroMel_CAF1	14,821,669 – 14,821,829	- - - "knownCDS=Parent=FBtr0086517;Name=CG7461-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7461-RA" - - - - -	7264	14,821,669 – 14,821,789	+	5	120	94.75	-1.91	0.88	0.990662
4529	2R_DroMel_CAF1	14,821,669 – 14,821,829		7265	14,821,709 – 14,821,829	+	5	120	95.17	-1.17	0.88	0.514379
4530	2R_DroMel_CAF1	14,822,398 – 14,822,514	- - - - - - - - -	7266	14,822,398 – 14,822,514	-	5	116	95.86	-1.43	0.93	0.934802
4531	2R_DroMel_CAF1	14,822,856 – 14,822,976	- - - - - - - - -	7267	14,822,856 – 14,822,976	+	5	120	95.17	-1.32	0.85	0.565459
4532	2R_DroMel_CAF1	14,829,714 – 14,829,820	- - - - - - - - -	7268	14,829,714 – 14,829,820	+	6	116	82.35	-2.40	0.66	0.779944
4533	2R_DroMel_CAF1	14,829,840 – 14,829,943	- - - - - - - - -	7269	14,829,840 – 14,829,943	+	5	120	86.21	-1.89	0.76	0.802641
4534	2R_DroMel_CAF1	14,833,563 – 14,833,655	- - - "knownCDS=Parent=FBtr0086557;Name=Rgk1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9811-RA" - - - - -	7270	14,833,563 – 14,833,655	+	6	104	77.99	-2.34	0.50	0.879322
4534	2R_DroMel_CAF1	14,833,563 – 14,833,655		7271	14,833,563 – 14,833,655	-	6	104	77.99	-1.37	0.72	0.809647
4535	2R_DroMel_CAF1	14,834,505 – 14,834,619	- - - - - - - - -	7272	14,834,505 – 14,834,619	-	6	117	78.11	-0.93	0.76	0.579490
4536	2R_DroMel_CAF1	14,834,809 – 14,834,916	- - - - - - - - -	7273	14,834,809 – 14,834,916	-	6	109	83.14	-3.07	0.57	0.727791
4537	2R_DroMel_CAF1	14,834,965 – 14,835,059	- - - - - - - - -	7274	14,834,965 – 14,835,059	-	5	96	82.36	-1.86	0.81	0.851800
4538	2R_DroMel_CAF1	14,837,610 – 14,837,708	- - - - - - - - -	7275	14,837,610 – 14,837,708	+	6	119	79.07	-4.17	0.56	0.992808
4538	2R_DroMel_CAF1	14,837,610 – 14,837,708	- - - - - - - - -	7276	14,837,610 – 14,837,708	-	6	119	79.07	-3.89	0.41	0.984667
4539	2R_DroMel_CAF1	14,843,170 – 14,843,367	- - - - - - - - -	7277	14,843,170 – 14,843,266	-	5	100	87.68	-2.13	0.71	0.778465
4539	2R_DroMel_CAF1	14,843,170 – 14,843,367	- - - - - - - - -	7278	14,843,266 – 14,843,367	+	5	113	79.56	-2.27	0.56	0.915649
4540	2R_DroMel_CAF1	14,844,119 – 14,844,209	- - - - - - - - -	7279	14,844,119 – 14,844,209	+	5	104	74.23	-1.87	0.15	0.902023
4541	2R_DroMel_CAF1	14,854,600 – 14,854,700	- - - - - - - - -	7280	14,854,600 – 14,854,700	+	5	102	93.65	-2.14	0.76	0.812422
4541	2R_DroMel_CAF1	14,854,600 – 14,854,700	- - - - - - - - -	7281	14,854,600 – 14,854,700	-	5	102	93.65	-1.52	0.84	0.830187
4542	2R_DroMel_CAF1	14,859,621 – 14,859,749	- - - - - - - - -	7282	14,859,621 – 14,859,723	+	6	116	70.91	-1.57	0.61	0.910535
				7283	14,859,621 – 14,859,723	-	6	116	70.91	-1.71	0.48	0.750249
				7284	14,859,648 – 14,859,749	-	6	106	74.77	-1.54	0.55	0.558260
4543	2R_DroMel_CAF1	14,863,624 – 14,863,730	- - - - - - - - -	7285	14,863,624 – 14,863,730	-	6	117	70.21	-1.49	0.55	0.744673
4544	2R_DroMel_CAF1	14,864,333 – 14,864,438	- - - - - - - - -	7286	14,864,333 – 14,864,438	-	6	120	84.24	-2.14	0.76	0.692245
4545	2R_DroMel_CAF1	14,865,291 – 14,865,382	- - - - - - - - -	7287	14,865,291 – 14,865,382	+	4	98	90.23	-2.60	0.84	0.976162
4545	2R_DroMel_CAF1	14,865,291 – 14,865,382	- - - - - - - - -	7288	14,865,291 – 14,865,382	-	4	98	90.23	-1.83	0.75	0.678229
4546	2R_DroMel_CAF1	14,868,637 – 14,868,733	- - - - - - - - -	7289	14,868,637 – 14,868,733	+	6	102	80.88	-2.97	0.47	0.823297
4547	2R_DroMel_CAF1	14,869,290 – 14,869,392	- - - - - - - - -	7290	14,869,290 – 14,869,392	+	6	104	91.91	-1.62	0.86	0.692991
4548	2R_DroMel_CAF1	14,875,593 – 14,875,742	- - - "knownCDS=Parent=FBtr0086519, FBtr0086520;Name=CG11961-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11961-RB, FlyBase+Annotation+IDs:CG11961-RA" - - - - -	7291	14,875,593 – 14,875,702	-	6	109	75.60	-1.48	0.61	0.716251
4548	2R_DroMel_CAF1	14,875,593 – 14,875,742		7292	14,875,622 – 14,875,742	-	6	120	75.83	-1.95	0.47	0.712491
4549	2R_DroMel_CAF1	14,878,361 – 14,878,459	- - - - - - - - -	7293	14,878,361 – 14,878,459	+	6	99	89.90	-1.15	0.92	0.565028
4550	2R_DroMel_CAF1	14,882,715 – 14,882,835	- - - "knownCDS=Parent=FBtr0086555;Name=CG9416-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9416-RA" - - - - -	7294	14,882,715 – 14,882,835	+	6	120	73.94	-1.47	0.56	0.567134
4550	2R_DroMel_CAF1	14,882,715 – 14,882,835		7295	14,882,715 – 14,882,835	-	6	120	73.94	-1.95	0.59	0.956219
4551	2R_DroMel_CAF1	14,883,658 – 14,883,766	- - - "knownCDS=Parent=FBtr0086555;Name=CG9416-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9416-RA" - - - - -	7296	14,883,658 – 14,883,766	-	6	112	78.49	-1.57	0.67	0.819570
4552	2R_DroMel_CAF1	14,884,237 – 14,884,347	- - - "knownCDS=Parent=FBtr0086555;Name=CG9416-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9416-RA" - - - - -	7297	14,884,237 – 14,884,347	-	6	111	79.76	-1.30	0.70	0.645927
4553	2R_DroMel_CAF1	14,887,380 – 14,887,477	- - - - - - - - -	7298	14,887,380 – 14,887,477	+	4	119	69.91	-3.11	0.62	0.999963
4554	2R_DroMel_CAF1	14,890,570 – 14,890,674	- - - - - - - - -	7299	14,890,570 – 14,890,674	+	6	104	82.88	-1.92	0.70	0.647668
4555	2R_DroMel_CAF1	14,895,620 – 14,895,729	- - - - - - - - -	7300	14,895,620 – 14,895,729	+	5	115	87.69	-1.79	0.69	0.525685
4556	2R_DroMel_CAF1	14,896,667 – 14,896,781	- - - "knownCDS=Parent=FBtr0086523;Name=CG10073-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10073-RA" - - - - -	7301	14,896,667 – 14,896,781	+	6	114	74.91	-1.83	0.46	0.555777
4557	2R_DroMel_CAF1	14,901,451 – 14,901,607	- - - "knownCDS=Parent=FBtr0086524;Name=CG10081-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10081-RA" - - - - -	7302	14,901,451 – 14,901,567	+	6	116	80.40	-2.45	0.69	0.930287
4557	2R_DroMel_CAF1	14,901,451 – 14,901,607		7303	14,901,491 – 14,901,607	+	6	116	82.99	-1.87	0.64	0.509152
4558	2R_DroMel_CAF1	14,902,749 – 14,902,869	- - - "knownCDS=Parent=FBtr0086524;Name=CG10081-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10081-RA" - - - - -	7304	14,902,749 – 14,902,869	+	6	120	76.61	-2.40	0.33	0.595215
4559	2R_DroMel_CAF1	14,906,116 – 14,906,222	- - - "knownCDS=Parent=FBtr0086525;Name=CG11257-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11257-RA" - - - - -	7305	14,906,116 – 14,906,222	-	6	106	83.14	-2.20	0.63	0.575975
4560	2R_DroMel_CAF1	14,915,197 – 14,915,304	- - - "knownCDS=Parent=FBtr0086548;Name=hts-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9325-RA" - - - - -	7306	14,915,197 – 14,915,304	+	6	110	81.00	-1.69	0.71	0.762015
4561	2R_DroMel_CAF1	14,915,728 – 14,915,833	- - - "knownCDS=Parent=FBtr0086548;Name=hts-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9325-RA" - - - - -	7307	14,915,728 – 14,915,833	+	6	114	79.71	-1.44	0.64	0.597125
4561	2R_DroMel_CAF1	14,915,728 – 14,915,833		7308	14,915,728 – 14,915,833	-	6	114	79.71	-1.59	0.66	0.725592
4562	2R_DroMel_CAF1	14,916,181 – 14,916,282	- - - - - - - - -	7309	14,916,181 – 14,916,282	-	5	101	94.06	-2.33	0.86	0.996773
4563	2R_DroMel_CAF1	14,918,790 – 14,918,889	- - - - - - - - -	7310	14,918,790 – 14,918,889	+	6	102	80.40	-2.14	0.50	0.522430
4564	2R_DroMel_CAF1	14,919,415 – 14,919,522	- - - - - - - - -	7311	14,919,415 – 14,919,522	+	6	108	80.43	-2.02	0.53	0.532336
4565	2R_DroMel_CAF1	14,923,363 – 14,923,465	- - - "knownCDS=Parent=FBtr0086545, FBtr0086546, FBtr0086548, FBtr0086549, FBtr0086550;Name=hts-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9325-RD, FlyBase+Annotation+IDs:CG9325-RB, FlyBase+Annotation+IDs:CG9325-RA, FlyBase+Annotation+IDs:CG9325-RE, FlyBase+Annotation+IDs:CG9325-RF" - - - - -	7312	14,923,363 – 14,923,465	+	6	109	77.15	-1.05	0.69	0.568767
4566	2R_DroMel_CAF1	14,929,458 – 14,929,555	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000103; Name=Dmel_Ser_CGA_14000103;TFAMID=DmelSCGA-14929461" "tRNAscan=type:Ser:anticodon:CGA f:14929460_t:14929543_strand=+_cove=86.41" - - "Rfam=X57383.1/159-240_RF00005;tRNA;\|4e-36" - - - "Flybase=FBgn0011975:transfer_RNA:ser4:12Ea:cytosolic_tRNA_gene\|1e-42"	7313	14,929,458 – 14,929,555	+	6	120	85.64	-1.37	0.94	0.734966
4566	2R_DroMel_CAF1	14,929,458 – 14,929,555		7314	14,929,458 – 14,929,555	-	6	120	85.64	-1.18	0.98	0.667721
4567	2R_DroMel_CAF1	14,930,131 – 14,930,221	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000105; Name=Dmel_Val_AAC_14000105;TFAMID=DmelVAAC-14930134" "tRNAscan=type:Val:anticodon:AAC f:14930133_t:14930207_strand=+_cove=79.44" - - "Rfam=AE003538.3/287237-287309_RF00005;tRNA;\|2e-35" - - - "Flybase=FBgn0012009:transfer_RNA:val4:70BCa:cytosolic_tRNA_gene\|2e-37"	7315	14,930,131 – 14,930,221	+	4	101	89.76	-1.65	0.97	0.908715
4567	2R_DroMel_CAF1	14,930,131 – 14,930,221		7316	14,930,131 – 14,930,221	-	4	101	89.76	-2.11	0.97	0.985606
4568	2R_DroMel_CAF1	14,931,445 – 14,931,577	- - - - - - - - -	7317	14,931,445 – 14,931,540	+	3	108	77.32	-2.53	0.86	0.999114
				7318	14,931,445 – 14,931,540	-	3	108	77.32	-2.30	0.76	0.995486
				7319	14,931,479 – 14,931,577	+	3	110	75.16	-2.87	0.90	0.999933
				7320	14,931,479 – 14,931,577	-	3	110	75.16	-2.56	0.78	0.999766
4569	2R_DroMel_CAF1	14,932,255 – 14,932,355	- - - - - - - - -	7321	14,932,255 – 14,932,355	+	3	102	96.71	-1.48	0.97	0.577869
4570	2R_DroMel_CAF1	14,934,158 – 14,934,276	- - - - - - - - -	7322	14,934,158 – 14,934,276	+	3	118	81.48	-1.56	0.72	0.542051
4571	2R_DroMel_CAF1	14,934,316 – 14,934,434	- - - - - - - - -	7323	14,934,316 – 14,934,434	-	3	119	96.07	-2.25	0.87	0.738636
4572	2R_DroMel_CAF1	14,938,093 – 14,938,309	- - - - - - - - -	7324	14,938,093 – 14,938,208	-	3	120	73.60	-1.90	0.60	0.950146
				7325	14,938,208 – 14,938,309	+	3	101	92.41	-2.34	0.90	0.896446
				7326	14,938,208 – 14,938,309	-	3	101	92.41	-2.56	0.92	0.955108
4573	2R_DroMel_CAF1	14,939,425 – 14,939,576	- - - - - - - - -	7327	14,939,425 – 14,939,517	-	5	120	68.12	-2.20	0.38	0.961722
				7328	14,939,449 – 14,939,557	+	4	120	76.17	-2.34	0.68	0.993441
				7329	14,939,449 – 14,939,557	-	4	120	76.17	-2.43	0.58	0.982110
				7330	14,939,486 – 14,939,576	+	5	111	67.23	-1.78	0.51	0.855456
4574	2R_DroMel_CAF1	14,952,019 – 14,952,167	- - - - - - - - -	7331	14,952,019 – 14,952,132	+	5	113	95.49	-1.66	0.91	0.976280
				7332	14,952,019 – 14,952,132	-	5	113	95.49	-2.72	0.94	0.999937
				7333	14,952,054 – 14,952,167	-	5	113	95.31	-2.04	0.84	0.968783
4575	2R_DroMel_CAF1	14,952,690 – 14,952,785	- - - - - - - - -	7334	14,952,690 – 14,952,785	-	4	117	78.51	-2.26	0.77	0.986678
4576	2R_DroMel_CAF1	14,957,112 – 14,957,299	- - - - - - - - -	7335	14,957,112 – 14,957,219	+	5	107	93.46	-2.04	0.84	0.984407
				7336	14,957,152 – 14,957,259	-	5	107	95.31	-1.62	0.86	0.908161
				7337	14,957,192 – 14,957,299	-	5	107	94.94	-2.51	0.91	0.999734
4577	2R_DroMel_CAF1	14,957,975 – 14,958,113	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002448; Name=psi28s-2444;Dbxref=FB:FBgn0082987, GB:AJ809552" - - - - - - - -	7338	14,957,975 – 14,958,078	+	6	109	76.36	-1.44	0.79	0.931534
4577	2R_DroMel_CAF1	14,957,975 – 14,958,113		7339	14,958,003 – 14,958,113	+	6	112	77.79	-1.76	0.86	0.942874
4578	2R_DroMel_CAF1	14,961,059 – 14,961,215	- - - - - - - - -	7340	14,961,059 – 14,961,176	+	5	117	94.18	-1.59	0.82	0.783590
				7341	14,961,096 – 14,961,215	+	5	119	92.09	-2.01	0.88	0.993343
				7342	14,961,096 – 14,961,215	-	5	119	92.09	-2.19	0.77	0.891835
4579	2R_DroMel_CAF1	14,961,540 – 14,961,633	- - - - - - - - -	7343	14,961,540 – 14,961,633	-	5	94	89.17	-1.99	0.70	0.585088
4580	2R_DroMel_CAF1	14,964,181 – 14,964,376	- - - "knownCDS=Parent=FBtr0086537;Name=betaTub56D-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9277-RA" - - - - -	7344	14,964,181 – 14,964,280	+	6	118	80.32	-2.13	0.80	0.926505
				7345	14,964,181 – 14,964,280	-	6	118	80.32	-1.11	0.74	0.546270
				7346	14,964,280 – 14,964,376	-	5	103	91.50	-2.57	0.92	0.999847
4581	2R_DroMel_CAF1	14,965,516 – 14,965,684	- - - - - - - - -	7347	14,965,516 – 14,965,621	-	6	120	75.95	-2.33	0.46	0.924225
4581	2R_DroMel_CAF1	14,965,516 – 14,965,684	- - - - - - - - -	7348	14,965,581 – 14,965,684	+	5	109	84.28	-1.47	0.91	0.617153
4582	2R_DroMel_CAF1	14,968,495 – 14,968,615	- - - "knownCDS=Parent=FBtr0086535;Name=CG7744-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7744-RA" - - - - -	7349	14,968,495 – 14,968,615	+	5	120	92.67	-2.47	0.86	0.998553
4582	2R_DroMel_CAF1	14,968,495 – 14,968,615		7350	14,968,495 – 14,968,615	-	5	120	92.67	-1.75	0.85	0.944135
4583	2R_DroMel_CAF1	14,968,775 – 14,968,935	- - - "knownCDS=Parent=FBtr0086535;Name=CG7744-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7744-RA" - - - - -	7351	14,968,775 – 14,968,895	+	5	120	91.25	-1.57	0.92	0.957901
				7352	14,968,815 – 14,968,935	+	5	120	92.58	-2.92	0.95	0.999983
				7353	14,968,815 – 14,968,935	-	5	120	92.58	-2.79	0.89	0.999785
4584	2R_DroMel_CAF1	14,969,374 – 14,969,568	- - - "knownCDS=Parent=FBtr0086535;Name=CG7744-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7744-RA" - - - - -	7354	14,969,374 – 14,969,491	-	5	120	91.96	-1.63	0.82	0.827056
				7355	14,969,451 – 14,969,568	+	5	120	88.66	-1.66	0.79	0.746341
				7356	14,969,451 – 14,969,568	-	5	120	88.66	-1.97	0.82	0.937703
4585	2R_DroMel_CAF1	14,971,100 – 14,971,217	- - - - - - - - -	7357	14,971,100 – 14,971,217	+	4	120	96.50	-1.52	0.95	0.590890
4586	2R_DroMel_CAF1	14,971,610 – 14,971,730	- - - - - - - - -	7358	14,971,610 – 14,971,730	+	4	120	99.58	-1.96	1.00	0.702197
4586	2R_DroMel_CAF1	14,971,610 – 14,971,730	- - - - - - - - -	7359	14,971,610 – 14,971,730	-	4	120	99.58	-2.00	0.98	0.702609
4587	2R_DroMel_CAF1	14,971,770 – 14,972,040	- - - - - - - - -	7360	14,971,770 – 14,971,890	+	4	120	98.19	-2.19	0.99	0.912913
				7361	14,971,810 – 14,971,925	+	4	120	95.52	-1.74	0.88	0.705908
				7362	14,971,810 – 14,971,925	-	4	120	95.52	-1.28	1.01	0.500000
				7363	14,971,890 – 14,972,004	+	3	120	90.40	-2.21	0.82	0.701636
				7364	14,971,890 – 14,972,004	-	3	120	90.40	-2.12	0.92	0.903906
				7365	14,971,925 – 14,972,040	+	3	120	89.30	-2.20	0.85	0.796595
4588	2R_DroMel_CAF1	14,972,154 – 14,972,474	- - - - - - - - -	7366	14,972,154 – 14,972,274	-	4	120	96.11	-1.92	0.90	0.825107
				7367	14,972,234 – 14,972,354	-	4	120	97.50	-2.41	0.92	0.911937
				7368	14,972,314 – 14,972,434	+	4	120	97.08	-2.34	0.92	0.926257
				7369	14,972,354 – 14,972,474	+	4	120	95.83	-1.36	0.98	0.528141
4589	2R_DroMel_CAF1	14,972,891 – 14,973,011	- - - "knownCDS=Parent=FBtr0086461;Name=mei-W68-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7753-RA" - - - - -	7370	14,972,891 – 14,973,011	+	4	120	92.22	-1.42	0.87	0.574299
4589	2R_DroMel_CAF1	14,972,891 – 14,973,011		7371	14,972,891 – 14,973,011	-	4	120	92.22	-2.14	0.84	0.908729
4590	2R_DroMel_CAF1	14,973,051 – 14,973,171	- - - "knownCDS=Parent=FBtr0086461;Name=mei-W68-cds, ;Dbxref=FlyBase+Annotation+IDs:CG7753-RA" - - - - -	7372	14,973,051 – 14,973,171	-	4	120	93.47	-1.91	0.88	0.888282
4591	2R_DroMel_CAF1	14,974,832 – 14,974,992	- - - "knownCDS=Parent=FBtr0086450, FBtr0086451, FBtr0100390, FBtr0100392;Name=par-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8201-RA, FlyBase+Annotation+IDs:CG8201-RB, FlyBase+Annotation+IDs:CG8201-RL, FlyBase+Annotation+IDs:CG8201-RN" - - - - -	7373	14,974,832 – 14,974,952	+	4	120	96.94	-2.53	0.92	0.949459
				7374	14,974,832 – 14,974,952	-	4	120	96.94	-2.20	0.98	0.948158
				7375	14,974,872 – 14,974,992	+	4	120	93.33	-1.79	0.91	0.877423
				7376	14,974,872 – 14,974,992	-	4	120	93.33	-1.89	0.88	0.881783
4592	2R_DroMel_CAF1	14,975,072 – 14,975,192	- - - "knownCDS=Parent=FBtr0086450, FBtr0086451, FBtr0100390, FBtr0100392;Name=par-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8201-RA, FlyBase+Annotation+IDs:CG8201-RB, FlyBase+Annotation+IDs:CG8201-RL, FlyBase+Annotation+IDs:CG8201-RN" - - - - -	7377	14,975,072 – 14,975,192	+	4	120	98.33	-2.28	0.99	0.923599
4593	2R_DroMel_CAF1	14,975,232 – 14,975,392	- - - "knownCDS=Parent=FBtr0086450, FBtr0086451, FBtr0100390, FBtr0100392;Name=par-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8201-RA, FlyBase+Annotation+IDs:CG8201-RB, FlyBase+Annotation+IDs:CG8201-RL, FlyBase+Annotation+IDs:CG8201-RN" - - - - -	7378	14,975,232 – 14,975,352	-	4	120	96.25	-1.88	0.93	0.845545
4593	2R_DroMel_CAF1	14,975,232 – 14,975,392		7379	14,975,272 – 14,975,392	-	4	120	95.28	-1.99	0.96	0.938750
4594	2R_DroMel_CAF1	14,977,066 – 14,977,336	- - - - - - - - -	7380	14,977,066 – 14,977,185	-	4	120	93.31	-1.82	0.82	0.702806
				7381	14,977,145 – 14,977,241	+	3	110	85.13	-2.85	0.76	0.940289
				7382	14,977,145 – 14,977,241	-	3	110	85.13	-2.68	0.76	0.918919
				7383	14,977,211 – 14,977,315	+	4	106	97.62	-1.67	0.95	0.633856
				7384	14,977,241 – 14,977,336	+	5	95	99.16	-2.00	0.97	0.993164
				7385	14,977,241 – 14,977,336	-	5	95	99.16	-1.43	0.98	0.859737
4595	2R_DroMel_CAF1	14,979,208 – 14,979,300	- - - - - - - - -	7386	14,979,208 – 14,979,300	-	5	94	94.65	-2.39	0.96	0.999911
4596	2R_DroMel_CAF1	14,981,033 – 14,981,144	- - - - - - - - -	7387	14,981,033 – 14,981,144	+	4	111	92.94	-2.31	0.82	0.898059
4596	2R_DroMel_CAF1	14,981,033 – 14,981,144	- - - - - - - - -	7388	14,981,033 – 14,981,144	-	4	111	92.94	-1.69	0.82	0.639350
4597	2R_DroMel_CAF1	14,984,739 – 14,984,831	- - - "knownCDS=Parent=FBtr0086452, FBtr0086453, FBtr0086454, FBtr0100391;Name=par-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8201-RD, FlyBase+Annotation+IDs:CG8201-RF, FlyBase+Annotation+IDs:CG8201-RE, FlyBase+Annotation+IDs:CG8201-RM" - - - - -	7389	14,984,739 – 14,984,831	+	5	120	67.54	-2.25	0.48	0.987324
4597	2R_DroMel_CAF1	14,984,739 – 14,984,831		7390	14,984,739 – 14,984,831	-	5	120	67.54	-2.43	0.36	0.984335
4598	2R_DroMel_CAF1	14,985,476 – 14,985,596	- - - "knownCDS=Parent=FBtr0086452, FBtr0086453, FBtr0086450, FBtr0086454, FBtr0086451, FBtr0086458, FBtr0100390, FBtr0100391, FBtr0100392;Name=par-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8201-RD, FlyBase+Annotation+IDs:CG8201-RF, FlyBase+Annotation+IDs:CG8201-RA, FlyBase+Annotation+IDs:CG8201-RE, FlyBase+Annotation+IDs:CG8201-RB, FlyBase+Annotation+IDs:CG8201-RI, FlyBase+Annotation+IDs:CG8201-RL, FlyBase+Annotation+IDs:CG8201-RM, FlyBase+Annotation+IDs:CG8201-RN" - - - - -	7391	14,985,476 – 14,985,596	-	6	120	84.78	-1.99	0.78	0.641855
4599	2R_DroMel_CAF1	14,987,996 – 14,988,129	- - - - - - - - -	7392	14,987,996 – 14,988,099	+	6	104	87.74	-1.55	0.85	0.540244
4599	2R_DroMel_CAF1	14,987,996 – 14,988,129	- - - - - - - - -	7393	14,988,036 – 14,988,129	+	6	110	76.96	-2.01	0.60	0.926087
4600	2R_DroMel_CAF1	14,995,022 – 14,995,121	- - "RNAmicro=f:14995022_t:14995130_strand:+_p:0.937740" - - - - - -	7394	14,995,022 – 14,995,121	+	3	109	86.07	-2.82	0.75	0.912920
4600	2R_DroMel_CAF1	14,995,022 – 14,995,121		7395	14,995,022 – 14,995,121	-	3	109	86.07	-2.52	0.66	0.689190
4601	2R_DroMel_CAF1	14,998,180 – 14,998,282	- - - "knownCDS=Parent=FBtr0086456;Name=par-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8201-RG" - - - - -	7396	14,998,180 – 14,998,282	+	6	116	76.94	-1.22	0.71	0.769690
4602	2R_DroMel_CAF1	14,998,352 – 14,998,466	- - - - - - - - -	7397	14,998,352 – 14,998,466	+	6	114	78.83	-1.78	0.60	0.754604
4603	2R_DroMel_CAF1	15,002,529 – 15,002,623	- - - - - - - - -	7398	15,002,529 – 15,002,623	+	6	99	73.86	-1.82	0.46	0.641566
4604	2R_DroMel_CAF1	15,006,406 – 15,006,510	- - - - - - - - -	7399	15,006,406 – 15,006,510	-	6	108	81.73	-2.50	0.69	0.875560
4605	2R_DroMel_CAF1	15,020,908 – 15,021,016	- - - - - - - - -	7400	15,020,908 – 15,021,016	-	3	119	81.61	-2.31	0.69	0.912394
4606	2R_DroMel_CAF1	15,021,154 – 15,021,291	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000106; Name=Dmel_His_GTG_14000106;TFAMID=DmelHGTG-15021273" "tRNAscan=type:His:anticodon:GTG f:15021201_t:15021319_strand=-_cove=67.15" - - "Rfam=AC004311.1/36015-35944_RF00005;tRNA;\|1e-34" - - - "Flybase=FBgn0011878:transfer_RNA:his:48F:cytosolic_tRNA_gene\|1e-36"	7401	15,021,154 – 15,021,251	+	6	120	80.90	-1.58	0.88	0.814022
				7402	15,021,173 – 15,021,291	+	6	120	95.46	-1.91	0.98	0.999537
				7403	15,021,173 – 15,021,291	-	6	120	95.46	-0.84	0.95	0.592310
4607	2R_DroMel_CAF1	15,021,322 – 15,021,412	- - - - - - - - -	7404	15,021,322 – 15,021,412	+	5	110	78.06	-1.90	0.61	0.820790
4608	2R_DroMel_CAF1	15,022,058 – 15,022,165	- - - - - - - - -	7405	15,022,058 – 15,022,165	+	5	120	77.02	-1.92	0.29	0.743936
4609	2R_DroMel_CAF1	15,022,905 – 15,023,001	- - - - - - - - -	7406	15,022,905 – 15,023,001	+	5	98	90.60	-1.62	0.81	0.801137
4609	2R_DroMel_CAF1	15,022,905 – 15,023,001	- - - - - - - - -	7407	15,022,905 – 15,023,001	-	5	98	90.60	-1.48	0.86	0.820724
4610	2R_DroMel_CAF1	15,068,423 – 15,068,514	- - - - - - - - -	7408	15,068,423 – 15,068,514	+	6	112	80.99	-2.19	0.58	0.725161
4610	2R_DroMel_CAF1	15,068,423 – 15,068,514	- - - - - - - - -	7409	15,068,423 – 15,068,514	-	6	112	80.99	-2.41	0.64	0.872311
4611	2R_DroMel_CAF1	15,068,899 – 15,068,998	- - - - - - - - -	7410	15,068,899 – 15,068,998	-	6	111	89.77	-2.59	0.77	0.500000
4612	2R_DroMel_CAF1	15,069,540 – 15,069,636	- - - - - - - - -	7411	15,069,540 – 15,069,636	+	6	98	80.76	-2.46	0.51	0.706718
4613	2R_DroMel_CAF1	15,079,242 – 15,079,334	- - - - - - - - -	7412	15,079,242 – 15,079,334	-	6	120	83.70	-1.88	0.88	0.863213
4614	2R_DroMel_CAF1	15,079,735 – 15,079,847	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000107; Name=Dmel_Glu_TTC_14000107;TFAMID=DmelETTC-15079807" "tRNAscan=type:Glu:anticodon:TTC f:15079735_t:15079806_strand=-_cove=80.27" - - "Rfam=AE003794.3/24226-24155_RF00005;tRNA;\|8e-35" - - - "Flybase=FBgn0011848:transfer_RNA:glu4:56Fa:cytosolic_tRNA_gene\|1e-36"	7413	15,079,735 – 15,079,847	+	6	120	84.98	-1.71	0.91	0.840602
4614	2R_DroMel_CAF1	15,079,735 – 15,079,847		7414	15,079,735 – 15,079,847	-	6	120	84.98	-1.84	0.85	0.773010
4615	2R_DroMel_CAF1	15,092,615 – 15,092,715	- - - - - - - - -	7415	15,092,615 – 15,092,715	+	6	101	76.84	-1.72	0.53	0.574496
4616	2R_DroMel_CAF1	15,093,723 – 15,093,840	- - - - - - - - -	7416	15,093,723 – 15,093,813	-	6	106	76.82	-1.96	0.75	0.969431
4616	2R_DroMel_CAF1	15,093,723 – 15,093,840	- - - - - - - - -	7417	15,093,743 – 15,093,840	-	6	110	70.90	-1.83	0.40	0.649125
4617	2R_DroMel_CAF1	15,097,330 – 15,097,423	- - - - - - - - -	7418	15,097,330 – 15,097,423	-	6	109	82.78	-2.74	0.51	0.531554
4618	2R_DroMel_CAF1	15,104,039 – 15,104,134	- - - - - - - - -	7419	15,104,039 – 15,104,134	+	6	110	68.78	-1.99	0.43	0.923149
4618	2R_DroMel_CAF1	15,104,039 – 15,104,134	- - - - - - - - -	7420	15,104,039 – 15,104,134	-	6	110	68.78	-2.48	0.31	0.966129
4619	2R_DroMel_CAF1	15,110,398 – 15,110,512	- - - "knownCDS=Parent=FBtr0086467, FBtr0086468;Name=CG16716-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16716-RB, FlyBase+Annotation+IDs:CG16716-RA" - - - - -	7421	15,110,398 – 15,110,512	+	6	114	75.79	-1.46	0.62	0.740680
4620	2R_DroMel_CAF1	15,110,697 – 15,110,793	- - - "knownCDS=Parent=FBtr0086468;Name=CG16716-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16716-RA" - - - - -	7422	15,110,697 – 15,110,793	+	4	96	85.07	-1.56	0.70	0.586014
4621	2R_DroMel_CAF1	15,111,258 – 15,111,348	- - - "knownCDS=Parent=FBtr0086468;Name=CG16716-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16716-RA" - - - - -	7423	15,111,258 – 15,111,348	+	5	90	72.22	-1.74	0.36	0.612101
4622	2R_DroMel_CAF1	15,114,435 – 15,114,535	- - - - - - - - -	7424	15,114,435 – 15,114,535	+	6	110	78.57	-1.57	0.59	0.579579
4623	2R_DroMel_CAF1	15,119,007 – 15,119,100	- - - - - - - - -	7425	15,119,007 – 15,119,100	+	6	111	77.76	-1.86	0.62	0.877142
4624	2R_DroMel_CAF1	15,124,736 – 15,124,838	- - - - - - - - -	7426	15,124,736 – 15,124,838	+	5	119	88.97	-1.66	0.90	0.938312
4625	2R_DroMel_CAF1	15,125,466 – 15,125,581	- - - - - - - - -	7427	15,125,466 – 15,125,581	-	5	120	90.24	-1.46	0.81	0.654517
4626	2R_DroMel_CAF1	15,129,079 – 15,129,181	- - - - - - - - -	7428	15,129,079 – 15,129,181	+	3	102	78.01	-1.23	0.81	0.688313
4627	2R_DroMel_CAF1	15,135,243 – 15,135,334	- - - - - - - - -	7429	15,135,243 – 15,135,334	-	5	91	93.20	-2.08	0.82	0.965814
4628	2R_DroMel_CAF1	15,140,223 – 15,140,317	- - - - - - - - -	7430	15,140,223 – 15,140,317	-	6	94	77.83	-1.20	0.71	0.702790
4629	2R_DroMel_CAF1	15,142,083 – 15,142,213	- - - - - - - - -	7431	15,142,083 – 15,142,187	-	5	104	91.73	-1.52	0.84	0.831119
4629	2R_DroMel_CAF1	15,142,083 – 15,142,213	- - - - - - - - -	7432	15,142,123 – 15,142,213	+	5	104	76.59	-1.85	0.35	0.605814
4630	2R_DroMel_CAF1	15,146,760 – 15,146,961	- - - - - - - - -	7433	15,146,760 – 15,146,867	+	6	107	78.13	-2.14	0.63	0.939457
				7434	15,146,760 – 15,146,867	-	6	107	78.13	-2.09	0.62	0.928814
				7435	15,146,800 – 15,146,895	+	5	95	88.75	-3.77	0.87	0.999894
				7436	15,146,800 – 15,146,895	-	5	95	88.75	-4.11	0.92	0.999962
				7437	15,146,839 – 15,146,935	+	3	96	93.66	-2.40	0.87	0.846316
				7438	15,146,839 – 15,146,935	-	3	96	93.66	-1.84	0.86	0.511148
				7439	15,146,867 – 15,146,961	+	3	94	95.68	-1.71	0.94	0.652785
4631	2R_DroMel_CAF1	15,149,938 – 15,150,053	- - - - - - - - -	7440	15,149,938 – 15,150,053	+	4	115	96.38	-1.46	0.97	0.577877
4632	2R_DroMel_CAF1	15,152,742 – 15,152,838	- - - - - - - - -	7441	15,152,742 – 15,152,838	+	4	96	90.97	-2.05	0.81	0.870931
4633	2R_DroMel_CAF1	15,160,470 – 15,160,570	- - - - - - - - -	7442	15,160,470 – 15,160,570	+	6	108	74.90	-2.32	0.39	0.871298
4633	2R_DroMel_CAF1	15,160,470 – 15,160,570	- - - - - - - - -	7443	15,160,470 – 15,160,570	-	6	108	74.90	-1.94	0.42	0.575991
4634	2R_DroMel_CAF1	15,161,865 – 15,161,964	- - - "knownCDS=Parent=FBtr0086491;Name=CG15905-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15905-RA" - - - - -	7444	15,161,865 – 15,161,964	-	6	111	74.60	-1.97	0.48	0.830805
4635	2R_DroMel_CAF1	15,162,916 – 15,163,062	- - - - - - - - -	7445	15,162,916 – 15,163,022	+	5	107	85.09	-2.49	0.56	0.576022
4635	2R_DroMel_CAF1	15,162,916 – 15,163,062	- - - - - - - - -	7446	15,162,956 – 15,163,062	-	6	118	78.61	-1.44	0.60	0.529398
4636	2R_DroMel_CAF1	15,163,882 – 15,164,049	- - - - - - - - -	7447	15,163,882 – 15,163,988	+	6	117	88.29	-2.47	0.83	0.868082
				7448	15,163,882 – 15,163,988	-	6	117	88.29	-3.33	0.94	0.999432
				7449	15,163,911 – 15,164,009	+	6	117	90.86	-2.95	0.81	0.925914
				7450	15,163,911 – 15,164,009	-	6	117	90.86	-3.53	0.82	0.985330
				7451	15,163,948 – 15,164,049	+	6	120	90.75	-3.07	0.75	0.529673
				7452	15,163,948 – 15,164,049	-	6	120	90.75	-2.61	0.80	0.744290
4637	2R_DroMel_CAF1	15,164,865 – 15,164,982	- - - - - - - - -	7453	15,164,865 – 15,164,982	+	5	117	91.37	-2.01	0.74	0.753095
4637	2R_DroMel_CAF1	15,164,865 – 15,164,982	- - - - - - - - -	7454	15,164,865 – 15,164,982	-	5	117	91.37	-2.33	0.71	0.713462
4638	2R_DroMel_CAF1	15,165,836 – 15,165,960	- - - - - - - - -	7455	15,165,836 – 15,165,927	+	4	99	80.97	-3.36	0.59	0.993969
4638	2R_DroMel_CAF1	15,165,836 – 15,165,960	- - - - - - - - -	7456	15,165,852 – 15,165,960	+	5	120	82.70	-2.45	0.69	0.949175
4639	2R_DroMel_CAF1	15,166,217 – 15,166,418	- - - - - - - - -	7457	15,166,217 – 15,166,323	+	5	118	93.39	-1.40	0.92	0.913759
				7458	15,166,217 – 15,166,323	-	5	118	93.39	-1.30	0.90	0.781320
				7459	15,166,323 – 15,166,418	+	6	120	78.14	-1.54	0.73	0.877515
4640	2R_DroMel_CAF1	15,166,610 – 15,166,724	- - - - - - - - -	7460	15,166,610 – 15,166,724	+	6	120	96.26	-0.95	0.96	0.829198
4640	2R_DroMel_CAF1	15,166,610 – 15,166,724	- - - - - - - - -	7461	15,166,610 – 15,166,724	-	6	120	96.26	-2.83	0.93	0.999827
4641	2R_DroMel_CAF1	15,168,339 – 15,168,459	- - - - - - - - -	7462	15,168,339 – 15,168,459	+	6	120	98.72	-1.33	0.95	0.948611
4642	2R_DroMel_CAF1	15,169,366 – 15,169,476	- - - - - - - - -	7463	15,169,366 – 15,169,476	-	5	112	85.02	-1.73	0.73	0.652001
4643	2R_DroMel_CAF1	15,174,938 – 15,175,091	- - - - - - - - -	7464	15,174,938 – 15,175,028	+	6	102	82.84	-2.41	0.58	0.556608
				7465	15,174,958 – 15,175,051	+	6	114	79.40	-3.27	0.58	0.981987
				7466	15,174,958 – 15,175,051	-	6	114	79.40	-1.96	0.59	0.788192
				7467	15,174,991 – 15,175,091	+	5	100	98.40	-1.16	0.96	0.500000
4644	2R_DroMel_CAF1	15,175,562 – 15,175,676	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002265; Name=dme-mir-6-3" - "RNAmicro=f:15175562_t:15175677_strand:+_p:0.999899" - "Rfam=AC004563.1/11687-11765_RF00143;mir-6;\|6e-39" - "miRBase=dme-mir-6-3\|5e-41" - "Flybase=FBgn0046817:mir-6-3:microRNA_encoding_gene\|8e-07"	7468	15,175,562 – 15,175,676	-	6	116	79.09	-3.80	0.92	0.970286
4645	2R_DroMel_CAF1	15,175,854 – 15,175,957	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002269; Name=dme-mir-6-1" - "RNAmicro=f:15175854_t:15175960_strand:+_p:0.999714" - "Rfam=AC009738.3/58936-59012_RF00143;mir-6;\|8e-38" - "miRBase=dme-mir-6-1\|3e-42" - "Flybase=FBgn0046817:mir-6-3:microRNA_encoding_gene\|7e-07"	7469	15,175,854 – 15,175,957	-	6	107	78.68	-3.82	0.86	0.965295
4646	2R_DroMel_CAF1	15,176,003 – 15,176,107	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002271; Name=dme-mir-5" - "RNAmicro=f:15176003_t:15176120_strand:-_p:0.999930" - - - "miRBase=dme-mir-5\|2e-34" - "Flybase=FBgn0046820:mir-5:microRNA_encoding_gene\|2e-07"	7470	15,176,003 – 15,176,107	+	6	118	79.44	-3.73	0.84	0.968336
4646	2R_DroMel_CAF1	15,176,003 – 15,176,107		7471	15,176,003 – 15,176,107	-	6	118	79.44	-3.96	0.98	0.978123
4647	2R_DroMel_CAF1	15,176,126 – 15,176,246	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002273; Name=dme-mir-4" - "RNAmicro=f:15176145_t:15176264_strand:+_p:0.587735" - - - "miRBase=dme-mir-4\|1e-41" - "Flybase=FBgn0082173:mir-4S:microRNA_encoding_gene\|5e-08"	7472	15,176,126 – 15,176,225	+	6	99	86.50	-3.65	0.87	0.993747
				7473	15,176,126 – 15,176,225	-	6	99	86.50	-1.78	0.85	0.717075
				7474	15,176,145 – 15,176,246	+	6	120	83.02	-3.65	0.89	0.985993
				7475	15,176,145 – 15,176,246	-	6	120	83.02	-2.53	0.95	0.987577
4648	2R_DroMel_CAF1	15,176,287 – 15,176,385	"known=miRNA_ID=Dmel\CG_RFAM_MIR_48002276;Parent=Dmel\CG_RFAM_MIR_48002275; Name=dme-miR-286" - "RNAmicro=f:15176287_t:15176405_strand:+_p:0.988788" - - - "miRBase=dme-mir-286\|3e-51" - "Flybase=FBgn0067706:mir-286:microRNA_encoding_gene\|2e-07"	7476	15,176,287 – 15,176,385	+	6	119	78.33	-2.72	0.60	0.977441
4648	2R_DroMel_CAF1	15,176,287 – 15,176,385		7477	15,176,287 – 15,176,385	-	6	119	78.33	-3.55	0.90	0.969476
4649	2R_DroMel_CAF1	15,176,447 – 15,176,544	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002277; Name=dme-mir-3" - "RNAmicro=f:15176447_t:15176558_strand:+_p:0.999999" - - - "miRBase=dme-mir-3\|2e-34" - "Flybase=FBgn0046822:mir-3:microRNA_encoding_gene\|7e-07"	7478	15,176,447 – 15,176,544	-	6	112	78.97	-4.74	0.76	0.966624
4650	2R_DroMel_CAF1	15,178,375 – 15,178,469	- - - - - - - - -	7479	15,178,375 – 15,178,469	+	5	102	74.54	-1.46	0.13	0.595433
4651	2R_DroMel_CAF1	15,180,356 – 15,180,447	- - - - - - - - -	7480	15,180,356 – 15,180,447	+	6	101	86.08	-2.83	0.82	0.919861
4652	2R_DroMel_CAF1	15,181,216 – 15,181,324	- - - "knownCDS=Parent=FBtr0086483, FBtr0086484;Name=hrg-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9854-RA, FlyBase+Annotation+IDs:CG9854-RB" - - - - -	7481	15,181,216 – 15,181,324	-	6	114	78.12	-1.97	0.56	0.804829
4653	2R_DroMel_CAF1	15,181,912 – 15,182,032	- - - "knownCDS=Parent=FBtr0086483, FBtr0086484;Name=hrg-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9854-RA, FlyBase+Annotation+IDs:CG9854-RB" - - - - -	7482	15,181,912 – 15,182,032	+	6	120	87.56	-1.53	0.86	0.599487
4654	2R_DroMel_CAF1	15,185,052 – 15,185,148	- - - - - - - - -	7483	15,185,052 – 15,185,148	+	4	100	82.49	-2.27	0.59	0.791647
4654	2R_DroMel_CAF1	15,185,052 – 15,185,148	- - - - - - - - -	7484	15,185,052 – 15,185,148	-	4	100	82.49	-1.96	0.70	0.839173
4655	2R_DroMel_CAF1	15,192,201 – 15,192,307	- - - - - - - - -	7485	15,192,201 – 15,192,307	+	4	112	91.92	-3.24	0.98	0.998736
4655	2R_DroMel_CAF1	15,192,201 – 15,192,307	- - - - - - - - -	7486	15,192,201 – 15,192,307	-	4	112	91.92	-1.99	1.00	0.982383
4656	2R_DroMel_CAF1	15,199,617 – 15,199,743	- - - - - - - - -	7487	15,199,617 – 15,199,719	+	6	120	88.58	-5.07	0.89	0.998971
				7488	15,199,617 – 15,199,719	-	6	120	88.58	-2.59	0.83	0.894552
				7489	15,199,642 – 15,199,743	+	6	120	86.55	-2.80	0.83	0.939426
4657	2R_DroMel_CAF1	15,207,278 – 15,207,377	- - - - - - - - -	7490	15,207,278 – 15,207,377	+	3	110	72.70	-1.23	0.69	0.689867
4658	2R_DroMel_CAF1	15,209,872 – 15,209,962	- - - - - - - - -	7491	15,209,872 – 15,209,962	+	6	112	74.06	-1.18	0.67	0.755310
4659	2R_DroMel_CAF1	15,209,964 – 15,210,065	- - - - - - - - -	7492	15,209,964 – 15,210,065	+	6	113	79.49	-1.79	0.67	0.842274
4660	2R_DroMel_CAF1	15,221,906 – 15,221,997	- - - - - - - - -	7493	15,221,906 – 15,221,997	+	6	107	80.25	-2.08	0.54	0.655929
4660	2R_DroMel_CAF1	15,221,906 – 15,221,997	- - - - - - - - -	7494	15,221,906 – 15,221,997	-	6	107	80.25	-2.15	0.49	0.507438
4661	2R_DroMel_CAF1	15,228,456 – 15,228,571	- - - "knownCDS=Parent=FBtr0086328;Name=Obp56f-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30450-RA" - - - - -	7495	15,228,456 – 15,228,571	+	4	115	86.38	-1.40	0.76	0.524508
4662	2R_DroMel_CAF1	15,239,878 – 15,239,986	- - - - - - - - -	7496	15,239,878 – 15,239,986	+	6	112	81.05	-2.58	0.56	0.825715
4663	2R_DroMel_CAF1	15,240,446 – 15,240,570	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000109; Name=Dmel_MetInit_CAT_14000109;TFAMID=DmelMCAT-15240554" "tRNAscan=type:Met:anticodon:CAT f:15240482_t:15240589_strand=-_cove=70.82" - - "Rfam=BX321905.19/40943-41014_RF00005;tRNA;\|2e-20" - - - "Flybase=FBgn0011927:transfer_RNA:met3:70Fa:cytosolic_tRNA_gene\|1e-36"	7497	15,240,446 – 15,240,548	+	6	120	77.96	-0.86	0.87	0.579802
4663	2R_DroMel_CAF1	15,240,446 – 15,240,570		7498	15,240,471 – 15,240,570	+	6	120	77.42	-0.77	0.87	0.554584
4664	2R_DroMel_CAF1	15,240,763 – 15,240,860	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000110; Name=Dmel_MetInit_CAT_14000110;TFAMID=DmelMCAT-15240768" "tRNAscan=type:Met:anticodon:CAT f:15240767_t:15240842_strand=+_cove=70.82" - - "Rfam=BX321905.19/40943-41014_RF00005;tRNA;\|1e-20" - - - "Flybase=FBgn0011927:transfer_RNA:met3:70Fa:cytosolic_tRNA_gene\|1e-36"	7499	15,240,763 – 15,240,860	+	6	118	77.64	-1.09	0.84	0.775520
4664	2R_DroMel_CAF1	15,240,763 – 15,240,860		7500	15,240,763 – 15,240,860	-	6	118	77.64	-1.62	0.76	0.924549
4665	2R_DroMel_CAF1	15,240,977 – 15,241,075	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000111; Name=Dmel_Glu_TTC_14000111;TFAMID=DmelETTC-15241076" "tRNAscan=type:Glu:anticodon:TTC f:15241005_t:15241102_strand=-_cove=68.77" - - "Rfam=AE003794.3/24226-24155_RF00005;tRNA;\|3e-34" - - - "Flybase=FBgn0011848:transfer_RNA:glu4:56Fa:cytosolic_tRNA_gene\|4e-36"	7501	15,240,977 – 15,241,075	+	5	114	77.48	-1.60	0.86	0.939405
4665	2R_DroMel_CAF1	15,240,977 – 15,241,075		7502	15,240,977 – 15,241,075	-	5	114	77.48	-1.30	0.96	0.941736
4666	2R_DroMel_CAF1	15,241,550 – 15,241,665	- - - - - - - - -	7503	15,241,550 – 15,241,665	-	4	120	93.49	-2.14	0.77	0.658394
4667	2R_DroMel_CAF1	15,242,298 – 15,242,417	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000112; Name=Dmel_Glu_TTC_14000112;TFAMID=DmelETTC-15242394" "tRNAscan=type:Glu:anticodon:TTC f:15242322_t:15242417_strand=-_cove=80.27" - - "Rfam=AE003794.3/24226-24155_RF00005;tRNA;\|9e-35" - - - "Flybase=FBgn0011848:transfer_RNA:glu4:56Fa:cytosolic_tRNA_gene\|1e-36"	7504	15,242,298 – 15,242,417	+	4	120	78.48	-2.13	0.79	0.978361
4667	2R_DroMel_CAF1	15,242,298 – 15,242,417		7505	15,242,298 – 15,242,417	-	4	120	78.48	-1.32	0.85	0.641493
4668	2R_DroMel_CAF1	15,242,839 – 15,242,939	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000113; Name=Dmel_Glu_TTC_14000113;TFAMID=DmelETTC-15242915" "tRNAscan=type:Glu:anticodon:TTC f:15242843_t:15242918_strand=-_cove=80.27" - - "Rfam=AE003794.3/24226-24155_RF00005;tRNA;\|7e-35" - - - "Flybase=FBgn0011848:transfer_RNA:glu4:56Fa:cytosolic_tRNA_gene\|1e-36"	7506	15,242,839 – 15,242,939	+	6	113	81.69	-1.65	0.89	0.828466
4668	2R_DroMel_CAF1	15,242,839 – 15,242,939		7507	15,242,839 – 15,242,939	-	6	113	81.69	-2.03	0.85	0.895929
4669	2R_DroMel_CAF1	15,243,022 – 15,243,125	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000114; Name=Dmel_Glu_CTC_14000114;TFAMID=DmelECTC-15243122" "tRNAscan=type:Glu:anticodon:CTC f:15243050_t:15243149_strand=-_cove=77.90" - - "Rfam=AE003794.3/25061-25132_RF00005;tRNA;\|8e-35" - - - "Flybase=FBgn0050220:CR30220:cytosolic_tRNA_gene\|1e-36"	7508	15,243,022 – 15,243,125	+	6	117	75.93	-2.14	0.80	0.982235
4669	2R_DroMel_CAF1	15,243,022 – 15,243,125		7509	15,243,022 – 15,243,125	-	6	117	75.93	-1.09	0.77	0.829239
4670	2R_DroMel_CAF1	15,243,723 – 15,243,818	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000115; Name=Dmel_Glu_CTC_14000115;TFAMID=DmelECTC-15243750" "tRNAscan=type:Glu:anticodon:CTC f:15243751_t:15243845_strand=+_cove=58.97" - - "Rfam=AE003794.3/25061-25132_RF00005;tRNA;\|4e-33" - - - "Flybase=FBgn0050220:CR30220:cytosolic_tRNA_gene\|6e-35"	7510	15,243,723 – 15,243,818	-	6	98	82.93	-1.67	0.80	0.690991
4671	2R_DroMel_CAF1	15,244,102 – 15,244,222	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000116; Name=Dmel_Glu_CTC_14000116;TFAMID=DmelECTC-15244145" - - - "Rfam=AE003794.3/25061-25132_RF00005;tRNA;\|8e-23" - - - "Flybase=FBgn0050449:CR30449:cytosolic_tRNA_gene\|1e-36"	7511	15,244,102 – 15,244,197	-	6	111	68.50	-1.04	0.66	0.681884
				7512	15,244,126 – 15,244,222	+	6	106	75.15	-1.37	0.77	0.937869
				7513	15,244,126 – 15,244,222	-	6	106	75.15	-1.92	0.86	0.979247
4672	2R_DroMel_CAF1	15,281,588 – 15,281,684	- - - - - - - - -	7514	15,281,588 – 15,281,684	+	6	120	75.99	-1.49	0.71	0.911731
4672	2R_DroMel_CAF1	15,281,588 – 15,281,684	- - - - - - - - -	7515	15,281,588 – 15,281,684	-	6	120	75.99	-1.90	0.52	0.784412
4673	2R_DroMel_CAF1	15,286,764 – 15,286,863	- - - - - - - - -	7516	15,286,764 – 15,286,863	+	5	113	85.85	-2.92	0.74	0.984156
4674	2R_DroMel_CAF1	15,286,947 – 15,287,037	- - - - - - - - -	7517	15,286,947 – 15,287,037	-	6	112	80.28	-1.78	0.74	0.856006
4675	2R_DroMel_CAF1	15,300,418 – 15,300,538	- - - - - - - - -	7518	15,300,418 – 15,300,514	-	6	105	75.22	-2.00	0.72	0.981065
4675	2R_DroMel_CAF1	15,300,418 – 15,300,538	- - - - - - - - -	7519	15,300,438 – 15,300,538	-	6	114	75.87	-1.09	0.74	0.787234
4676	2R_DroMel_CAF1	15,309,833 – 15,309,941	- - - - - - - - -	7520	15,309,833 – 15,309,941	+	6	116	84.28	-2.78	0.70	0.711407
4677	2R_DroMel_CAF1	15,310,059 – 15,310,157	- - - - - - - - -	7521	15,310,059 – 15,310,157	+	5	104	86.97	-1.50	0.78	0.547337
4677	2R_DroMel_CAF1	15,310,059 – 15,310,157	- - - - - - - - -	7522	15,310,059 – 15,310,157	-	5	104	86.97	-1.86	0.69	0.581231
4678	2R_DroMel_CAF1	15,312,583 – 15,312,675	- - - - - - - - -	7523	15,312,583 – 15,312,675	-	6	108	79.69	-1.39	0.63	0.544749
4679	2R_DroMel_CAF1	15,314,614 – 15,314,730	- - - - - - - - -	7524	15,314,614 – 15,314,715	+	6	120	81.95	-2.42	0.61	0.769713
4679	2R_DroMel_CAF1	15,314,614 – 15,314,730	- - - - - - - - -	7525	15,314,640 – 15,314,730	+	6	120	78.86	-2.35	0.44	0.672194
4680	2R_DroMel_CAF1	15,321,360 – 15,321,451	- - - - - - - - -	7526	15,321,360 – 15,321,451	+	6	94	88.58	-2.22	0.80	0.621295
4680	2R_DroMel_CAF1	15,321,360 – 15,321,451	- - - - - - - - -	7527	15,321,360 – 15,321,451	-	6	94	88.58	-1.96	0.80	0.526505
4681	2R_DroMel_CAF1	15,321,859 – 15,322,151	- - - - - - - - -	7528	15,321,859 – 15,321,966	+	6	115	78.42	-3.23	0.59	0.989291
				7529	15,321,859 – 15,321,966	-	6	115	78.42	-3.39	0.54	0.991199
				7530	15,321,966 – 15,322,056	+	5	110	82.66	-2.16	0.76	0.929993
				7531	15,322,027 – 15,322,136	+	6	119	80.08	-1.63	0.65	0.704519
				7532	15,322,056 – 15,322,151	+	6	120	85.63	-2.41	0.81	0.826994
				7533	15,322,056 – 15,322,151	-	6	120	85.63	-1.74	0.82	0.612383
4682	2R_DroMel_CAF1	15,323,242 – 15,323,332	- - - - - - - - -	7534	15,323,242 – 15,323,332	-	6	105	75.49	-1.90	0.85	0.977314
4683	2R_DroMel_CAF1	15,323,395 – 15,323,524	- - - - - - - - -	7535	15,323,395 – 15,323,487	-	6	101	79.07	-1.96	0.54	0.664712
				7536	15,323,426 – 15,323,524	+	6	118	77.43	-1.97	0.53	0.777255
				7537	15,323,426 – 15,323,524	-	6	118	77.43	-2.80	0.47	0.973059
4684	2R_DroMel_CAF1	15,326,036 – 15,326,316	- - - - - - - - -	7538	15,326,036 – 15,326,151	-	5	116	93.76	-1.48	0.84	0.771021
				7539	15,326,072 – 15,326,178	-	6	109	79.36	-1.98	0.61	0.829539
				7540	15,326,151 – 15,326,258	+	6	120	78.92	-1.49	0.66	0.734169
				7541	15,326,178 – 15,326,294	+	6	120	76.66	-2.15	0.53	0.909757
				7542	15,326,218 – 15,326,316	+	4	116	77.43	-1.59	0.69	0.631444
4685	2R_DroMel_CAF1	15,328,780 – 15,328,908	- - - - - - - - -	7543	15,328,780 – 15,328,873	-	6	93	90.61	-2.29	0.81	0.726928
4685	2R_DroMel_CAF1	15,328,780 – 15,328,908	- - - - - - - - -	7544	15,328,818 – 15,328,908	-	6	94	72.12	-2.43	0.33	0.936890
4686	2R_DroMel_CAF1	15,342,743 – 15,342,863	- - - "knownCDS=Parent=FBtr0086336;Name=Toll-7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8595-RA" - - - - -	7545	15,342,743 – 15,342,863	+	6	120	81.72	-1.45	0.67	0.536000
4687	2R_DroMel_CAF1	15,344,583 – 15,344,703	- - - "knownCDS=Parent=FBtr0086336;Name=Toll-7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8595-RA" - - - - -	7546	15,344,583 – 15,344,703	+	6	120	76.56	-2.10	0.49	0.823296
4687	2R_DroMel_CAF1	15,344,583 – 15,344,703		7547	15,344,583 – 15,344,703	-	6	120	76.56	-2.39	0.50	0.949225
4688	2R_DroMel_CAF1	15,345,787 – 15,345,896	- - - "knownCDS=Parent=FBtr0086336;Name=Toll-7-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8595-RA" - - - - -	7548	15,345,787 – 15,345,896	-	6	112	79.55	-1.63	0.59	0.567004
4689	2R_DroMel_CAF1	15,347,333 – 15,347,429	- - - - - - - - -	7549	15,347,333 – 15,347,429	+	3	96	97.92	-1.79	0.93	0.639567
4690	2R_DroMel_CAF1	15,357,875 – 15,358,007	- - - - - - - - -	7550	15,357,875 – 15,357,989	-	6	120	90.44	-1.97	0.83	0.696838
4690	2R_DroMel_CAF1	15,357,875 – 15,358,007	- - - - - - - - -	7551	15,357,909 – 15,358,007	-	6	120	82.58	-1.66	0.67	0.544721
4691	2R_DroMel_CAF1	15,362,553 – 15,362,646	- - - - - - - - -	7552	15,362,553 – 15,362,646	+	6	118	79.42	-1.55	0.60	0.535763
4691	2R_DroMel_CAF1	15,362,553 – 15,362,646	- - - - - - - - -	7553	15,362,553 – 15,362,646	-	6	118	79.42	-2.88	0.57	0.963803
4692	2R_DroMel_CAF1	15,363,902 – 15,364,012	- - - - - - - - -	7554	15,363,902 – 15,364,012	-	6	120	82.74	-2.15	0.69	0.716125
4693	2R_DroMel_CAF1	15,364,644 – 15,364,739	- - - - - - - - -	7555	15,364,644 – 15,364,739	-	6	104	80.22	-2.34	0.50	0.668321
4694	2R_DroMel_CAF1	15,365,570 – 15,365,668	- - - - - - - - -	7556	15,365,570 – 15,365,668	+	5	98	92.76	-1.73	0.83	0.923152
4694	2R_DroMel_CAF1	15,365,570 – 15,365,668	- - - - - - - - -	7557	15,365,570 – 15,365,668	-	5	98	92.76	-3.08	0.92	0.999966
4695	2R_DroMel_CAF1	15,382,260 – 15,382,359	- - - - - - - - -	7558	15,382,260 – 15,382,359	+	3	99	89.90	-4.02	0.91	0.983394
4695	2R_DroMel_CAF1	15,382,260 – 15,382,359	- - - - - - - - -	7559	15,382,260 – 15,382,359	-	3	99	89.90	-3.54	0.76	0.905910
4696	2R_DroMel_CAF1	15,382,771 – 15,382,868	- - - - - - - - -	7560	15,382,771 – 15,382,868	+	3	98	91.75	-3.37	0.76	0.841446
4697	2R_DroMel_CAF1	15,383,133 – 15,383,244	- - - "knownCDS=Parent=FBtr0086337;Name=Obp56i-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30448-RA" - - - - -	7561	15,383,133 – 15,383,244	+	5	111	84.77	-1.91	0.77	0.818836
4698	2R_DroMel_CAF1	15,387,503 – 15,387,593	- - - - - - - - -	7562	15,387,503 – 15,387,593	+	6	120	78.33	-2.78	0.46	0.945949
4698	2R_DroMel_CAF1	15,387,503 – 15,387,593	- - - - - - - - -	7563	15,387,503 – 15,387,593	-	6	120	78.33	-1.56	0.58	0.532356
4699	2R_DroMel_CAF1	15,390,506 – 15,390,620	- - - - - - - - -	7564	15,390,506 – 15,390,596	+	6	90	82.96	-2.52	0.58	0.593779
				7565	15,390,523 – 15,390,620	+	6	97	79.93	-2.49	0.47	0.724380
				7566	15,390,523 – 15,390,620	-	6	97	79.93	-2.98	0.55	0.953794
4700	2R_DroMel_CAF1	15,394,228 – 15,394,318	- - - "knownCDS=Parent=FBtr0086341;Name=CG13872-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13872-RA" - - - - -	7567	15,394,228 – 15,394,318	-	6	108	70.00	-1.55	0.49	0.614977
4701	2R_DroMel_CAF1	15,402,880 – 15,402,983	- - "RNAmicro=f:15402880_t:15402982_strand:+_p:0.827813" - - - - - -	7568	15,402,880 – 15,402,983	-	5	103	87.18	-1.65	0.92	0.907804
4702	2R_DroMel_CAF1	15,404,718 – 15,404,821	- - - - - - - - -	7569	15,404,718 – 15,404,821	+	6	107	84.43	-2.29	0.77	0.740836
4703	2R_DroMel_CAF1	15,404,923 – 15,405,015	- - - - - - - - -	7570	15,404,923 – 15,405,015	+	6	113	81.07	-1.44	0.65	0.539682
4704	2R_DroMel_CAF1	15,405,937 – 15,406,056	- - - - - - - - -	7571	15,405,937 – 15,406,056	+	6	120	75.36	-3.36	0.70	0.993429
4704	2R_DroMel_CAF1	15,405,937 – 15,406,056	- - - - - - - - -	7572	15,405,937 – 15,406,056	-	6	120	75.36	-3.11	0.72	0.992470
4705	2R_DroMel_CAF1	15,407,406 – 15,407,496	- - - - - - - - -	7573	15,407,406 – 15,407,496	+	6	119	83.18	-2.02	0.64	0.534746
4706	2R_DroMel_CAF1	15,408,635 – 15,408,736	- - - - - - - - -	7574	15,408,635 – 15,408,736	-	6	107	75.10	-1.94	0.52	0.862491
4707	2R_DroMel_CAF1	15,409,348 – 15,409,438	- - - - - - - - -	7575	15,409,348 – 15,409,438	-	6	108	79.94	-1.39	0.80	0.765988
4708	2R_DroMel_CAF1	15,411,990 – 15,412,090	- - - - - - - - -	7576	15,411,990 – 15,412,090	+	6	107	76.66	-1.95	0.47	0.603054
4709	2R_DroMel_CAF1	15,417,810 – 15,417,906	- - - - - - - - -	7577	15,417,810 – 15,417,906	+	6	104	78.87	-2.82	0.47	0.938091
4709	2R_DroMel_CAF1	15,417,810 – 15,417,906	- - - - - - - - -	7578	15,417,810 – 15,417,906	-	6	104	78.87	-2.25	0.53	0.843152
4710	2R_DroMel_CAF1	15,426,278 – 15,426,408	- - - - - - - - -	7579	15,426,278 – 15,426,379	+	6	112	81.42	-1.37	0.67	0.518207
				7580	15,426,278 – 15,426,379	-	6	112	81.42	-1.83	0.73	0.795530
				7581	15,426,311 – 15,426,408	+	6	117	80.14	-2.23	0.55	0.765745
				7582	15,426,311 – 15,426,408	-	6	117	80.14	-1.39	0.69	0.648784
4711	2R_DroMel_CAF1	15,437,113 – 15,437,225	- - - - - - - - -	7583	15,437,113 – 15,437,225	+	5	113	73.12	-1.77	0.49	0.698332
4712	2R_DroMel_CAF1	15,439,539 – 15,439,651	- - - - - - - - -	7584	15,439,539 – 15,439,651	+	5	113	90.72	-1.21	0.92	0.627103
4713	2R_DroMel_CAF1	15,447,001 – 15,447,108	- - - - - - - - -	7585	15,447,001 – 15,447,108	+	6	115	94.74	-1.09	0.98	0.938263
4714	2R_DroMel_CAF1	15,450,171 – 15,450,268	- - - - - - - - -	7586	15,450,171 – 15,450,268	+	5	97	89.97	-1.50	0.83	0.739652
4715	2R_DroMel_CAF1	15,450,775 – 15,450,871	- - - - - - - - -	7587	15,450,775 – 15,450,871	-	6	104	83.46	-1.79	0.68	0.511441
4716	2R_DroMel_CAF1	15,451,565 – 15,451,689	- - - - - - - - -	7588	15,451,565 – 15,451,661	+	6	112	75.54	-2.17	0.36	0.582136
4716	2R_DroMel_CAF1	15,451,565 – 15,451,689	- - - - - - - - -	7589	15,451,596 – 15,451,689	+	6	100	82.15	-1.79	0.65	0.603355
4717	2R_DroMel_CAF1	15,455,917 – 15,456,010	- - - - - - - - -	7590	15,455,917 – 15,456,010	-	6	120	82.95	-1.58	0.80	0.641211
4718	2R_DroMel_CAF1	15,456,596 – 15,456,690	- - - - - - - - -	7591	15,456,596 – 15,456,690	-	6	104	76.12	-1.94	0.50	0.745960
4719	2R_DroMel_CAF1	15,485,510 – 15,485,630	- - - - - - - - -	7592	15,485,510 – 15,485,630	+	5	120	86.65	-2.42	0.69	0.862572
4720	2R_DroMel_CAF1	15,487,887 – 15,487,987	- - - - - - - - -	7593	15,487,887 – 15,487,987	+	4	116	69.75	-1.86	0.46	0.555968
4721	2R_DroMel_CAF1	15,488,467 – 15,488,587	- - - - - - - - -	7594	15,488,467 – 15,488,564	+	5	97	94.02	-2.05	0.81	0.950590
4721	2R_DroMel_CAF1	15,488,467 – 15,488,587	- - - - - - - - -	7595	15,488,496 – 15,488,587	+	5	91	94.73	-1.67	0.78	0.569909
4722	2R_DroMel_CAF1	15,488,786 – 15,488,942	- - - - - - - - -	7596	15,488,786 – 15,488,906	-	5	120	92.88	-2.22	0.87	0.997490
4722	2R_DroMel_CAF1	15,488,786 – 15,488,942	- - - - - - - - -	7597	15,488,826 – 15,488,942	-	5	116	97.57	-1.62	0.94	0.965178
4723	2R_DroMel_CAF1	15,490,267 – 15,490,395	- - - - - - - - -	7598	15,490,267 – 15,490,370	+	6	111	76.86	-1.39	0.63	0.651100
4723	2R_DroMel_CAF1	15,490,267 – 15,490,395	- - - - - - - - -	7599	15,490,294 – 15,490,395	+	6	120	79.02	-2.10	0.53	0.755630
4724	2R_DroMel_CAF1	15,492,541 – 15,492,646	- - - - - - - - -	7600	15,492,541 – 15,492,646	+	4	107	78.63	-2.35	0.49	0.602080
4725	2R_DroMel_CAF1	15,498,929 – 15,499,070	- - - - - - - - -	7601	15,498,929 – 15,499,031	+	5	105	89.92	-2.96	0.71	0.919074
				7602	15,498,962 – 15,499,070	+	5	111	93.22	-3.95	0.85	0.999761
				7603	15,498,962 – 15,499,070	-	5	111	93.22	-2.55	0.76	0.919379
4726	2R_DroMel_CAF1	15,501,836 – 15,501,933	- - - - - - - - -	7604	15,501,836 – 15,501,933	-	5	97	88.87	-2.70	0.88	0.999206
4727	2R_DroMel_CAF1	15,506,972 – 15,507,071	- - - - - - - - -	7605	15,506,972 – 15,507,071	+	6	105	75.11	-1.77	0.63	0.933886
4728	2R_DroMel_CAF1	15,510,723 – 15,510,863	- - - - - - - - -	7606	15,510,723 – 15,510,838	+	6	120	94.96	-1.55	0.87	0.743645
				7607	15,510,723 – 15,510,838	-	6	120	94.96	-1.33	0.93	0.916866
				7608	15,510,761 – 15,510,863	+	6	115	79.58	-2.04	0.67	0.898897
4729	2R_DroMel_CAF1	15,515,133 – 15,515,261	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000118; Name=Dmel_Arg_CCT_14000118;TFAMID=DmelRCCT-15515231" "tRNAscan=type:Arg:anticodon:CCT f:15515158_t:15515255_strand=-_cove=67.50" - - "Rfam=BX321905.19/44558-44486_RF00005;tRNA;\|8e-23" - "miRBase=hsa-mir-594\|7e-25" "ncRNAdb=MmuscAK030470_unclassifiable\|3e-29" "Flybase=FBgn0050212:CR30212:cytosolic_tRNA_gene\|3e-37"	7609	15,515,133 – 15,515,238	+	6	114	83.27	-2.05	0.98	0.978602
4729	2R_DroMel_CAF1	15,515,133 – 15,515,261		7610	15,515,158 – 15,515,261	+	6	120	79.64	-1.31	0.83	0.753004
4730	2R_DroMel_CAF1	15,518,640 – 15,518,791	- - - "knownCDS=Parent=FBtr0086325;Name=CG16898-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16898-RA" - - - - -	7611	15,518,640 – 15,518,758	-	4	120	92.16	-1.52	0.93	0.766114
4730	2R_DroMel_CAF1	15,518,640 – 15,518,791		7612	15,518,680 – 15,518,791	+	4	117	86.05	-1.71	0.67	0.601239
4731	2R_DroMel_CAF1	15,520,366 – 15,520,458	- - - - - - - - -	7613	15,520,366 – 15,520,458	+	5	102	72.56	-1.48	0.14	0.520930
4732	2R_DroMel_CAF1	15,525,452 – 15,525,562	- - - - - - - - -	7614	15,525,452 – 15,525,562	+	5	110	88.55	-1.94	0.71	0.628980
4732	2R_DroMel_CAF1	15,525,452 – 15,525,562	- - - - - - - - -	7615	15,525,452 – 15,525,562	-	5	110	88.55	-1.94	0.75	0.809070
4733	2R_DroMel_CAF1	15,537,777 – 15,537,908	- - - "knownCDS=texon1623;Parent=CG_RGUI_GID_mRNA_40003975, CG_DGIL_SNO_28357384" - - - - -	7616	15,537,777 – 15,537,880	-	5	103	84.40	-3.40	0.60	0.966965
4733	2R_DroMel_CAF1	15,537,777 – 15,537,908		7617	15,537,803 – 15,537,908	-	5	112	75.21	-1.97	0.43	0.824789
4734	2R_DroMel_CAF1	15,543,164 – 15,543,254	- - - - - - - - -	7618	15,543,164 – 15,543,254	-	6	91	78.76	-1.51	0.60	0.572607
4735	2R_DroMel_CAF1	15,549,557 – 15,549,650	- - - - - - - - -	7619	15,549,557 – 15,549,650	+	4	104	83.84	-2.35	0.56	0.592352
4735	2R_DroMel_CAF1	15,549,557 – 15,549,650	- - - - - - - - -	7620	15,549,557 – 15,549,650	-	4	104	83.84	-1.81	0.63	0.608863
4736	2R_DroMel_CAF1	15,549,801 – 15,549,895	- - - - - - - - -	7621	15,549,801 – 15,549,895	+	6	115	78.92	-1.78	0.62	0.797404
4736	2R_DroMel_CAF1	15,549,801 – 15,549,895	- - - - - - - - -	7622	15,549,801 – 15,549,895	-	6	115	78.92	-1.41	0.77	0.825576
4737	2R_DroMel_CAF1	15,551,531 – 15,551,630	- - - - - - - - -	7623	15,551,531 – 15,551,630	+	6	109	84.85	-2.05	0.75	0.581832
4738	2R_DroMel_CAF1	15,553,500 – 15,553,617	- - - - - - - - -	7624	15,553,500 – 15,553,617	-	6	118	77.89	-1.37	0.77	0.861336
4739	2R_DroMel_CAF1	15,555,661 – 15,555,786	- - - - - - - - -	7625	15,555,661 – 15,555,754	+	6	104	80.48	-1.26	0.68	0.547051
				7626	15,555,661 – 15,555,754	-	6	104	80.48	-1.90	0.65	0.801101
				7627	15,555,679 – 15,555,786	-	6	118	83.37	-2.23	0.62	0.520767
4740	2R_DroMel_CAF1	15,561,658 – 15,561,767	- - - - - - - - -	7628	15,561,658 – 15,561,767	-	6	115	82.61	-2.09	0.80	0.847926
4741	2R_DroMel_CAF1	15,567,165 – 15,567,269	- - - - - - - - -	7629	15,567,165 – 15,567,269	+	6	107	81.62	-3.00	0.56	0.875252
4742	2R_DroMel_CAF1	15,571,817 – 15,571,911	- - - - - - - - -	7630	15,571,817 – 15,571,911	+	6	99	83.61	-2.44	0.67	0.653210
4742	2R_DroMel_CAF1	15,571,817 – 15,571,911	- - - - - - - - -	7631	15,571,817 – 15,571,911	-	6	99	83.61	-1.72	0.69	0.500000
4743	2R_DroMel_CAF1	15,578,725 – 15,578,822	- - - - - - - - -	7632	15,578,725 – 15,578,822	+	6	110	80.34	-1.84	0.75	0.869357
4744	2R_DroMel_CAF1	15,579,267 – 15,579,366	- - - - - - - - -	7633	15,579,267 – 15,579,366	-	6	102	89.87	-2.05	0.80	0.539418
4745	2R_DroMel_CAF1	15,582,485 – 15,582,624	- - "RNAmicro=f:15582485_t:15582588_strand:-_p:0.500000" - - - - - -	7634	15,582,485 – 15,582,588	+	6	104	75.79	-2.14	0.59	0.963362
				7635	15,582,485 – 15,582,588	-	6	104	75.79	-1.60	0.56	0.655714
				7636	15,582,518 – 15,582,624	+	6	111	78.84	-2.29	0.80	0.961428
				7637	15,582,518 – 15,582,624	-	6	111	78.84	-1.80	0.66	0.871100
4746	2R_DroMel_CAF1	15,593,219 – 15,593,343	- - - - - - - - -	7638	15,593,219 – 15,593,327	+	6	109	83.39	-1.88	0.84	0.809557
4746	2R_DroMel_CAF1	15,593,219 – 15,593,343	- - - - - - - - -	7639	15,593,247 – 15,593,343	+	6	112	88.72	-2.50	0.87	0.971175
4747	2R_DroMel_CAF1	15,595,144 – 15,595,237	- - - - - - - - -	7640	15,595,144 – 15,595,237	+	6	108	77.36	-1.14	0.68	0.606672
4748	2R_DroMel_CAF1	15,599,845 – 15,599,940	- - - - - - - - -	7641	15,599,845 – 15,599,940	+	6	105	75.82	-1.86	0.47	0.596461
4749	2R_DroMel_CAF1	15,604,751 – 15,604,864	- - - - - - - - -	7642	15,604,751 – 15,604,864	+	5	120	92.06	-1.51	0.79	0.607838
4750	2R_DroMel_CAF1	15,614,773 – 15,614,871	- - - - - - - - -	7643	15,614,773 – 15,614,871	+	6	110	75.35	-1.30	0.70	0.854442
4750	2R_DroMel_CAF1	15,614,773 – 15,614,871	- - - - - - - - -	7644	15,614,773 – 15,614,871	-	6	110	75.35	-1.75	0.60	0.889219
4751	2R_DroMel_CAF1	15,625,842 – 15,625,940	- - - - - - - - -	7645	15,625,842 – 15,625,940	-	5	98	89.05	-2.48	0.74	0.936262
4752	2R_DroMel_CAF1	15,626,925 – 15,627,045	- - - "knownCDS=Parent=FBtr0086309;Name=18w-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8896-RA" - - - - -	7646	15,626,925 – 15,627,045	+	6	120	78.44	-2.33	0.54	0.910042
4753	2R_DroMel_CAF1	15,632,046 – 15,632,137	- - - - - - - - -	7647	15,632,046 – 15,632,137	+	5	91	97.36	-1.60	0.85	0.752700
4753	2R_DroMel_CAF1	15,632,046 – 15,632,137	- - - - - - - - -	7648	15,632,046 – 15,632,137	-	5	91	97.36	-1.36	0.90	0.732691
4754	2R_DroMel_CAF1	15,646,237 – 15,646,327	- - - - - - - - -	7649	15,646,237 – 15,646,327	-	5	101	90.89	-1.18	0.90	0.561626
4755	2R_DroMel_CAF1	15,652,085 – 15,652,176	- - - - - - - - -	7650	15,652,085 – 15,652,176	+	5	98	70.44	-2.71	0.36	0.998426
4755	2R_DroMel_CAF1	15,652,085 – 15,652,176	- - - - - - - - -	7651	15,652,085 – 15,652,176	-	5	98	70.44	-2.39	0.32	0.989928
4756	2R_DroMel_CAF1	15,660,110 – 15,660,202	- - - - - - - - -	7652	15,660,110 – 15,660,202	-	6	97	82.70	-2.58	0.63	0.741830
4757	2R_DroMel_CAF1	15,660,630 – 15,660,723	- - - - - - - - -	7653	15,660,630 – 15,660,723	+	6	109	83.01	-3.01	0.66	0.837499
4757	2R_DroMel_CAF1	15,660,630 – 15,660,723	- - - - - - - - -	7654	15,660,630 – 15,660,723	-	6	109	83.01	-3.81	0.69	0.932992
4758	2R_DroMel_CAF1	15,661,151 – 15,661,271	- - - "knownCDS=Parent=FBtr0086310;Name=CG11041-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11041-RA" - - - - -	7655	15,661,151 – 15,661,271	-	6	120	80.44	-1.33	0.68	0.587898
4759	2R_DroMel_CAF1	15,665,084 – 15,665,174	- - - - - - - - -	7656	15,665,084 – 15,665,174	-	6	106	81.10	-2.85	0.60	0.911846
4760	2R_DroMel_CAF1	15,667,247 – 15,667,337	- - - - - - - - -	7657	15,667,247 – 15,667,337	+	6	98	77.57	-3.05	0.68	0.989084
4760	2R_DroMel_CAF1	15,667,247 – 15,667,337	- - - - - - - - -	7658	15,667,247 – 15,667,337	-	6	98	77.57	-1.71	0.61	0.796188
4761	2R_DroMel_CAF1	15,670,212 – 15,670,314	- - - - - - - - -	7659	15,670,212 – 15,670,314	-	5	110	78.96	-2.34	0.47	0.915258
4762	2R_DroMel_CAF1	15,671,762 – 15,671,859	- - - - - - - - -	7660	15,671,762 – 15,671,859	+	6	114	78.29	-1.55	0.62	0.687813
4763	2R_DroMel_CAF1	15,672,530 – 15,672,621	- - - - - - - - -	7661	15,672,530 – 15,672,621	+	4	91	99.45	-3.28	0.96	0.907464
4763	2R_DroMel_CAF1	15,672,530 – 15,672,621	- - - - - - - - -	7662	15,672,530 – 15,672,621	-	4	91	99.45	-2.13	0.97	0.763976
4764	2R_DroMel_CAF1	15,675,204 – 15,675,309	- - - - - - - - -	7663	15,675,204 – 15,675,309	+	6	107	74.61	-2.12	0.61	0.978034
4764	2R_DroMel_CAF1	15,675,204 – 15,675,309	- - - - - - - - -	7664	15,675,204 – 15,675,309	-	6	107	74.61	-1.55	0.58	0.727216
4765	2R_DroMel_CAF1	15,678,386 – 15,678,478	- - - - - - - - -	7665	15,678,386 – 15,678,478	+	5	99	79.74	-3.24	0.76	0.998752
4766	2R_DroMel_CAF1	15,679,206 – 15,679,300	- - - - - - - - -	7666	15,679,206 – 15,679,300	+	4	97	81.42	-2.60	0.59	0.930766
4767	2R_DroMel_CAF1	15,681,032 – 15,681,123	- - - - - - - - -	7667	15,681,032 – 15,681,123	-	6	104	76.27	-1.52	0.57	0.550479
4768	2R_DroMel_CAF1	15,681,477 – 15,681,570	- - - - - - - - -	7668	15,681,477 – 15,681,570	+	6	93	91.26	-1.98	0.86	0.886834
4769	2R_DroMel_CAF1	15,686,338 – 15,686,430	- - - - - - - - -	7669	15,686,338 – 15,686,430	+	6	106	81.51	-1.61	0.79	0.755613
4770	2R_DroMel_CAF1	15,687,367 – 15,687,470	- - - - - - - - -	7670	15,687,367 – 15,687,470	+	5	108	82.28	-2.53	0.50	0.800298
4770	2R_DroMel_CAF1	15,687,367 – 15,687,470	- - - - - - - - -	7671	15,687,367 – 15,687,470	-	5	108	82.28	-2.45	0.44	0.646045
4771	2R_DroMel_CAF1	15,700,694 – 15,700,786	- - - - - - - - -	7672	15,700,694 – 15,700,786	-	4	93	90.45	-2.02	0.78	0.829348
4772	2R_DroMel_CAF1	15,700,990 – 15,701,097	- - - - - - - - -	7673	15,700,990 – 15,701,097	+	3	118	75.71	-1.63	0.63	0.744042
4773	2R_DroMel_CAF1	15,704,653 – 15,704,748	- - - - - - - - -	7674	15,704,653 – 15,704,748	+	6	105	82.22	-2.53	0.90	0.967398
4773	2R_DroMel_CAF1	15,704,653 – 15,704,748	- - - - - - - - -	7675	15,704,653 – 15,704,748	-	6	105	82.22	-2.46	0.84	0.936210
4774	2R_DroMel_CAF1	15,705,131 – 15,705,230	- - - - - - - - -	7676	15,705,131 – 15,705,230	-	6	120	74.33	-2.14	0.51	0.948575
4775	2R_DroMel_CAF1	15,705,979 – 15,706,084	- - - - - - - - -	7677	15,705,979 – 15,706,084	-	6	106	78.21	-0.90	0.81	0.587311
4776	2R_DroMel_CAF1	15,707,748 – 15,707,838	- - - - - - - - -	7678	15,707,748 – 15,707,838	+	6	101	83.23	-1.70	0.67	0.500000
4777	2R_DroMel_CAF1	15,709,952 – 15,710,053	- - - - - - - - -	7679	15,709,952 – 15,710,053	+	6	115	82.89	-1.77	0.77	0.701503
4778	2R_DroMel_CAF1	15,713,584 – 15,713,679	- - - - - - - - -	7680	15,713,584 – 15,713,679	+	5	104	91.16	-1.38	0.89	0.823391
4779	2R_DroMel_CAF1	15,717,268 – 15,717,370	- - - - - - - - -	7681	15,717,268 – 15,717,370	-	3	102	90.73	-2.52	0.98	0.989141
4780	2R_DroMel_CAF1	15,721,774 – 15,721,871	- - - - - - - - -	7682	15,721,774 – 15,721,871	-	6	119	81.01	-2.26	0.54	0.665708
4781	2R_DroMel_CAF1	15,721,888 – 15,721,988	- - - - - - - - -	7683	15,721,888 – 15,721,988	+	4	108	68.99	-2.18	0.46	0.914998
4782	2R_DroMel_CAF1	15,730,398 – 15,730,496	- - - - - - - - -	7684	15,730,398 – 15,730,496	-	6	109	90.23	-2.28	0.79	0.517121
4783	2R_DroMel_CAF1	15,733,233 – 15,733,325	- - - - - - - - -	7685	15,733,233 – 15,733,325	+	5	98	78.00	-2.25	0.44	0.906789
4784	2R_DroMel_CAF1	15,735,442 – 15,735,538	- - - - - - - - -	7686	15,735,442 – 15,735,538	+	6	101	81.76	-1.79	0.62	0.562828
4785	2R_DroMel_CAF1	15,737,165 – 15,737,258	- - - - - - - - -	7687	15,737,165 – 15,737,258	-	4	93	96.06	-1.69	0.92	0.733853
4786	2R_DroMel_CAF1	15,740,477 – 15,740,621	- - - - - - - - -	7688	15,740,477 – 15,740,586	-	5	109	94.31	-1.28	0.90	0.776315
				7689	15,740,509 – 15,740,621	+	5	112	98.04	-1.46	0.96	0.919919
				7690	15,740,509 – 15,740,621	-	5	112	98.04	-1.24	0.99	0.773953
4787	2R_DroMel_CAF1	15,742,594 – 15,742,684	- - - - - - - - -	7691	15,742,594 – 15,742,684	-	6	114	83.47	-2.91	0.61	0.690723
4788	2R_DroMel_CAF1	15,744,323 – 15,744,424	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000120; Name=Dmel_Gly_GCC_14000120;TFAMID=DmelGGCC-15744344" "tRNAscan=type:Gly:anticodon:GCC f:15744343_t:15744433_strand=+_cove=82.25" - - "Rfam=AC099683.1/51353-51419_RF00005;tRNA;\|7e-26" - - "ncRNAdb=HsapiAK024805_RNA\|2e-20" "Flybase=FBgn0011859:transfer_RNA:gly3:22BCa:cytosolic_tRNA_gene\|4e-36"	7692	15,744,323 – 15,744,424	+	5	101	90.30	-1.26	0.96	0.787032
4789	2R_DroMel_CAF1	15,747,653 – 15,747,773	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000121; Name=Dmel_Gly_GCC_14000121;TFAMID=DmelGGCC-15747660" "tRNAscan=type:Gly:anticodon:GCC f:15747659_t:15747735_strand=+_cove=82.25" - - "Rfam=AC099683.1/51353-51419_RF00005;tRNA;\|8e-26" - - "ncRNAdb=HsapiAK024805_RNA\|3e-20" "Flybase=FBgn0011859:transfer_RNA:gly3:22BCa:cytosolic_tRNA_gene\|5e-36"	7693	15,747,653 – 15,747,773	+	5	120	83.78	-2.15	0.88	0.969993
4790	2R_DroMel_CAF1	15,750,559 – 15,750,649	- - - "knownCDS=texon1645;Parent=CG_NCBI_GNO_32551136, CG_RGUI_GID_mRNA_40003982, CG_BATZ_CON_47004691" - - - - -	7694	15,750,559 – 15,750,649	+	4	90	91.67	-2.01	0.85	0.900997
4790	2R_DroMel_CAF1	15,750,559 – 15,750,649		7695	15,750,559 – 15,750,649	-	4	90	91.67	-1.64	0.84	0.704856
4791	2R_DroMel_CAF1	15,754,455 – 15,754,552	- - - - - - - - -	7696	15,754,455 – 15,754,552	+	4	108	85.04	-1.62	0.76	0.664145
4792	2R_DroMel_CAF1	15,757,741 – 15,757,855	- - - "knownCDS=Parent=FBtr0086322;Name=CG11208-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11208-RA" - - - - -	7697	15,757,741 – 15,757,855	+	6	120	79.49	-1.12	0.72	0.571230
4793	2R_DroMel_CAF1	15,758,756 – 15,758,876	- - - "knownCDS=Parent=FBtr0086322;Name=CG11208-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11208-RA" - - - - -	7698	15,758,756 – 15,758,876	+	6	120	82.17	-2.76	0.55	0.739348
4793	2R_DroMel_CAF1	15,758,756 – 15,758,876		7699	15,758,756 – 15,758,876	-	6	120	82.17	-2.77	0.49	0.586992
4794	2R_DroMel_CAF1	15,761,204 – 15,761,324	- - - "knownCDS=Parent=FBtr0086321;Name=ppk6-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11209-RA" - - - - -	7700	15,761,204 – 15,761,324	+	5	120	95.42	-1.48	0.92	0.939877
4795	2R_DroMel_CAF1	15,761,364 – 15,761,723	- - - "knownCDS=Parent=FBtr0086321;Name=ppk6-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11209-RA" - - - - -	7701	15,761,364 – 15,761,484	-	5	120	93.33	-1.28	0.92	0.824613
				7702	15,761,444 – 15,761,564	-	5	120	92.50	-2.28	0.93	0.999678
				7703	15,761,564 – 15,761,683	+	5	119	93.61	-1.66	0.86	0.941493
				7704	15,761,564 – 15,761,683	-	5	119	93.61	-2.17	0.91	0.998850
				7705	15,761,604 – 15,761,723	+	5	119	95.63	-1.33	0.87	0.692417
				7706	15,761,604 – 15,761,723	-	5	119	95.63	-1.23	0.98	0.867817
4796	2R_DroMel_CAF1	15,762,248 – 15,762,363	- - - "knownCDS=Parent=FBtr0086321;Name=ppk6-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11209-RA" - - - - -	7707	15,762,248 – 15,762,363	+	4	115	85.80	-2.41	0.70	0.911989
4796	2R_DroMel_CAF1	15,762,248 – 15,762,363		7708	15,762,248 – 15,762,363	-	4	115	85.80	-2.81	0.71	0.962374
4797	2R_DroMel_CAF1	15,763,829 – 15,763,947	- - - "knownCDS=Parent=FBtr0086320;Name=CG9864-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9864-RA" - - - - -	7709	15,763,829 – 15,763,947	-	6	120	80.04	-1.42	0.76	0.758789
4798	2R_DroMel_CAF1	15,767,095 – 15,767,191	- - - - - - - - -	7710	15,767,095 – 15,767,191	+	5	116	71.73	-1.63	0.24	0.519773
4799	2R_DroMel_CAF1	15,767,854 – 15,767,953	- - - - - - - - -	7711	15,767,854 – 15,767,953	-	4	120	80.09	-1.80	0.73	0.810213
4800	2R_DroMel_CAF1	15,768,211 – 15,768,309	- - - - - - - - -	7712	15,768,211 – 15,768,309	+	4	102	92.90	-2.62	0.94	0.994059
4801	2R_DroMel_CAF1	15,769,007 – 15,769,103	- - - - - - - - -	7713	15,769,007 – 15,769,103	-	4	97	88.41	-1.56	0.86	0.720162
4802	2R_DroMel_CAF1	15,772,246 – 15,772,337	- - - - - - - - -	7714	15,772,246 – 15,772,337	+	5	117	66.29	-1.90	0.56	0.957443
4803	2R_DroMel_CAF1	15,775,888 – 15,775,990	- - - - - - - - -	7715	15,775,888 – 15,775,990	+	6	119	77.78	-2.47	0.39	0.726077
4804	2R_DroMel_CAF1	15,776,144 – 15,776,341	- - - - - - - - -	7716	15,776,144 – 15,776,242	-	6	112	81.91	-1.66	0.65	0.569466
				7717	15,776,174 – 15,776,274	+	6	107	81.40	-2.19	0.60	0.737712
				7718	15,776,174 – 15,776,274	-	6	107	81.40	-2.05	0.57	0.577658
				7719	15,776,207 – 15,776,304	-	6	97	79.88	-1.74	0.60	0.654006
				7720	15,776,242 – 15,776,341	-	6	102	82.98	-2.52	0.70	0.794465
4805	2R_DroMel_CAF1	15,777,450 – 15,777,558	- - - "knownCDS=Parent=FBtr0086307;Name=mus209-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9193-RA" - - - - -	7721	15,777,450 – 15,777,558	-	6	118	78.56	-1.39	0.72	0.794214
4806	2R_DroMel_CAF1	15,779,084 – 15,779,203	- - - "knownCDS=Parent=FBtr0086273, FBtr0086274;Name=RpS18-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8900-RB, FlyBase+Annotation+IDs:CG8900-RA" - - - - -	7722	15,779,084 – 15,779,203	-	6	120	83.67	-1.28	0.96	0.648596
4807	2R_DroMel_CAF1	15,781,667 – 15,781,787	- - - "knownCDS=Parent=FBtr0086276;Name=CG8908-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8908-RA" - - - - -	7723	15,781,667 – 15,781,787	+	6	120	74.22	-2.07	0.54	0.952064
4808	2R_DroMel_CAF1	15,782,080 – 15,782,200	- - - "knownCDS=Parent=FBtr0086276;Name=CG8908-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8908-RA" - - - - -	7724	15,782,080 – 15,782,200	+	6	120	78.61	-1.15	0.76	0.704659
4809	2R_DroMel_CAF1	15,785,134 – 15,785,249	- - - - - - - - -	7725	15,785,134 – 15,785,249	-	4	120	80.93	-1.66	0.63	0.500000
4810	2R_DroMel_CAF1	15,785,468 – 15,785,588	- - - "knownCDS=Parent=FBtr0086276;Name=CG8908-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8908-RA" - - - - -	7726	15,785,468 – 15,785,588	+	6	120	79.67	-1.37	0.65	0.591322
4811	2R_DroMel_CAF1	15,786,408 – 15,786,517	- - - - - - - - -	7727	15,786,408 – 15,786,517	+	5	120	78.33	-1.94	0.42	0.583609
4812	2R_DroMel_CAF1	15,793,596 – 15,793,689	- - - "knownCDS=Parent=FBtr0086304;Name=CG9143-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9143-RA" - - - - -	7728	15,793,596 – 15,793,689	+	4	93	94.09	-1.48	0.90	0.608934
4813	2R_DroMel_CAF1	15,794,138 – 15,794,230	- - - - - - - - -	7729	15,794,138 – 15,794,230	+	6	97	80.32	-1.11	0.73	0.537993
4813	2R_DroMel_CAF1	15,794,138 – 15,794,230	- - - - - - - - -	7730	15,794,138 – 15,794,230	-	6	97	80.32	-1.11	0.87	0.562519
4814	2R_DroMel_CAF1	15,801,541 – 15,801,634	- - - - - - - - -	7731	15,801,541 – 15,801,634	-	6	93	83.94	-1.94	0.81	0.746065
4815	2R_DroMel_CAF1	15,802,300 – 15,802,414	- - - - - - - - -	7732	15,802,300 – 15,802,414	+	3	114	95.91	-2.41	0.91	0.903186
4816	2R_DroMel_CAF1	15,804,138 – 15,804,255	- - - "knownCDS=Parent=FBtr0086301;Name=CG9036-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9036-RA" - - - - -	7733	15,804,138 – 15,804,255	+	6	120	76.11	-1.77	0.57	0.813440
4817	2R_DroMel_CAF1	15,805,836 – 15,805,971	- - - - - - - - -	7734	15,805,836 – 15,805,949	-	6	115	94.13	-1.80	0.88	0.935271
4817	2R_DroMel_CAF1	15,805,836 – 15,805,971	- - - - - - - - -	7735	15,805,871 – 15,805,971	+	6	120	87.87	-1.58	0.84	0.519437
4818	2R_DroMel_CAF1	15,806,758 – 15,806,859	- - - - - - - - -	7736	15,806,758 – 15,806,859	-	6	120	80.44	-2.01	0.62	0.793629
4819	2R_DroMel_CAF1	15,820,445 – 15,820,569	- - - - - - - - -	7737	15,820,445 – 15,820,538	-	5	106	70.65	-1.71	0.21	0.593021
4819	2R_DroMel_CAF1	15,820,445 – 15,820,569	- - - - - - - - -	7738	15,820,461 – 15,820,569	+	5	108	80.78	-2.31	0.42	0.708900
4820	2R_DroMel_CAF1	15,824,325 – 15,824,438	- - - - - - - - -	7739	15,824,325 – 15,824,429	-	6	107	91.05	-2.94	0.85	0.983680
4820	2R_DroMel_CAF1	15,824,325 – 15,824,438	- - - - - - - - -	7740	15,824,334 – 15,824,438	-	6	107	91.39	-1.93	0.82	0.572941
4821	2R_DroMel_CAF1	15,826,291 – 15,826,394	- - - - - - - - -	7741	15,826,291 – 15,826,394	-	6	120	77.31	-1.95	0.79	0.965103
4822	2R_DroMel_CAF1	15,827,264 – 15,827,354	- - - - - - - - -	7742	15,827,264 – 15,827,354	+	4	90	96.11	-1.87	0.89	0.760427
4822	2R_DroMel_CAF1	15,827,264 – 15,827,354	- - - - - - - - -	7743	15,827,264 – 15,827,354	-	4	90	96.11	-2.46	0.90	0.939070
4823	2R_DroMel_CAF1	15,832,741 – 15,832,832	- - - "knownCDS=Parent=FBtr0086282;Name=CG13871-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13871-RA" - - - - -	7744	15,832,741 – 15,832,832	+	4	91	78.39	-2.07	0.61	0.871720
4823	2R_DroMel_CAF1	15,832,741 – 15,832,832		7745	15,832,741 – 15,832,832	-	4	91	78.39	-2.18	0.62	0.927146
4824	2R_DroMel_CAF1	15,840,599 – 15,840,692	- - - "knownCDS=Parent=FBtr0086280;Name=CG8920-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8920-RB" - - - - -	7746	15,840,599 – 15,840,692	-	6	93	87.21	-2.14	0.82	0.730405
4825	2R_DroMel_CAF1	15,842,970 – 15,843,137	- - - - - - - - -	7747	15,842,970 – 15,843,068	+	5	98	97.75	-2.16	0.92	0.996748
				7748	15,842,970 – 15,843,068	-	5	98	97.75	-1.51	1.00	0.970338
				7749	15,843,038 – 15,843,137	+	6	120	79.62	-1.51	0.67	0.716894
				7750	15,843,038 – 15,843,137	-	6	120	79.62	-2.11	0.64	0.889056
4826	2R_DroMel_CAF1	15,848,927 – 15,849,129	- - - - - - - - -	7751	15,848,927 – 15,849,035	+	5	115	78.95	-1.84	0.58	0.668515
				7752	15,848,927 – 15,849,035	-	5	115	78.95	-1.88	0.51	0.562373
				7753	15,849,035 – 15,849,129	+	6	105	79.07	-3.02	0.49	0.963058
				7754	15,849,035 – 15,849,129	-	6	105	79.07	-2.20	0.59	0.893791
4827	2R_DroMel_CAF1	15,852,826 – 15,852,917	- - - - - - - - -	7755	15,852,826 – 15,852,917	-	6	120	74.59	-1.43	0.73	0.936681
4828	2R_DroMel_CAF1	15,852,934 – 15,853,041	- - - - - - - - -	7756	15,852,934 – 15,853,041	+	5	115	89.92	-1.77	0.80	0.841000
4828	2R_DroMel_CAF1	15,852,934 – 15,853,041	- - - - - - - - -	7757	15,852,934 – 15,853,041	-	5	115	89.92	-1.90	0.74	0.706072
4829	2R_DroMel_CAF1	15,863,917 – 15,864,007	- - - - - - - - -	7758	15,863,917 – 15,864,007	+	3	94	91.37	-1.94	0.85	0.621885
4830	2R_DroMel_CAF1	15,871,591 – 15,871,688	- - - - - - - - -	7759	15,871,591 – 15,871,688	-	5	99	89.66	-1.46	0.89	0.824025
4831	2R_DroMel_CAF1	15,872,186 – 15,872,336	- - - - - - - - -	7760	15,872,186 – 15,872,299	+	5	113	96.99	-1.63	0.88	0.901909
				7761	15,872,226 – 15,872,336	+	5	110	96.91	-1.27	0.96	0.831713
				7762	15,872,226 – 15,872,336	-	5	110	96.91	-2.20	0.93	0.998724
4832	2R_DroMel_CAF1	15,874,247 – 15,874,404	- - - - - - - - -	7763	15,874,247 – 15,874,364	-	6	120	75.84	-1.80	0.51	0.665596
4832	2R_DroMel_CAF1	15,874,247 – 15,874,404	- - - - - - - - -	7764	15,874,285 – 15,874,404	-	5	119	91.34	-1.55	0.76	0.526593
4833	2R_DroMel_CAF1	15,876,834 – 15,876,937	- - - - - - - - -	7765	15,876,834 – 15,876,937	-	5	120	79.28	-1.79	0.66	0.762859
4834	2R_DroMel_CAF1	15,878,568 – 15,878,710	- - - - - - - - -	7766	15,878,568 – 15,878,676	+	5	114	94.38	-1.81	0.98	0.998511
4834	2R_DroMel_CAF1	15,878,568 – 15,878,710	- - - - - - - - -	7767	15,878,602 – 15,878,710	-	5	110	94.66	-1.85	0.86	0.973256
4835	2R_DroMel_CAF1	15,878,983 – 15,879,076	- - - - - - - - -	7768	15,878,983 – 15,879,076	+	6	116	83.02	-1.74	0.66	0.514881
4835	2R_DroMel_CAF1	15,878,983 – 15,879,076	- - - - - - - - -	7769	15,878,983 – 15,879,076	-	6	116	83.02	-1.60	0.75	0.603136
4836	2R_DroMel_CAF1	15,879,137 – 15,879,246	- - - - - - - - -	7770	15,879,137 – 15,879,246	-	5	116	77.15	-1.87	0.72	0.939155
4837	2R_DroMel_CAF1	15,879,593 – 15,879,859	- - - - - - - - -	7771	15,879,593 – 15,879,691	+	6	120	82.24	-1.48	0.72	0.583231
				7772	15,879,665 – 15,879,756	+	5	106	84.96	-2.01	0.69	0.754215
				7773	15,879,720 – 15,879,820	-	5	119	83.50	-1.71	0.77	0.707350
				7774	15,879,756 – 15,879,859	-	6	120	84.16	-1.71	0.78	0.580969
4838	2R_DroMel_CAF1	15,881,031 – 15,881,126	- - - - - - - - -	7775	15,881,031 – 15,881,126	+	6	108	82.48	-2.15	0.79	0.849670
4838	2R_DroMel_CAF1	15,881,031 – 15,881,126	- - - - - - - - -	7776	15,881,031 – 15,881,126	-	6	108	82.48	-1.69	0.70	0.619139
4839	2R_DroMel_CAF1	15,881,900 – 15,881,997	- - - - - - - - -	7777	15,881,900 – 15,881,997	+	6	100	97.01	-1.01	0.99	0.938603
4839	2R_DroMel_CAF1	15,881,900 – 15,881,997	- - - - - - - - -	7778	15,881,900 – 15,881,997	-	6	100	97.01	-0.95	0.98	0.882731
4840	2R_DroMel_CAF1	15,882,542 – 15,882,637	- - - - - - - - -	7779	15,882,542 – 15,882,637	+	5	105	90.45	-2.61	0.78	0.979244
4841	2R_DroMel_CAF1	15,893,228 – 15,893,324	- - - - - - - - -	7780	15,893,228 – 15,893,324	-	5	101	74.08	-2.23	0.59	0.987060
4842	2R_DroMel_CAF1	15,894,846 – 15,894,952	- - - - - - - - -	7781	15,894,846 – 15,894,952	-	6	118	74.45	-0.70	0.77	0.612209
4843	2R_DroMel_CAF1	15,895,642 – 15,895,741	- - - - - - - - -	7782	15,895,642 – 15,895,741	+	6	109	84.22	-1.97	0.72	0.558190
4844	2R_DroMel_CAF1	15,895,811 – 15,895,927	- - - - - - - - -	7783	15,895,811 – 15,895,927	+	5	116	86.64	-2.98	0.73	0.981316
4845	2R_DroMel_CAF1	15,896,286 – 15,896,390	- - - - - - - - -	7784	15,896,286 – 15,896,390	-	5	110	92.96	-1.88	0.86	0.982917
4846	2R_DroMel_CAF1	15,902,371 – 15,902,485	- - - - - - - - -	7785	15,902,371 – 15,902,485	-	5	119	76.55	-2.33	0.72	0.992894
4847	2R_DroMel_CAF1	15,905,024 – 15,905,114	- - - - - - - - -	7786	15,905,024 – 15,905,114	-	5	116	66.53	-2.49	0.42	0.992521
4848	2R_DroMel_CAF1	15,905,322 – 15,905,430	- - - - - - - - -	7787	15,905,322 – 15,905,430	-	5	120	72.59	-0.44	0.78	0.595157
4849	2R_DroMel_CAF1	15,906,375 – 15,906,474	- - - - - - - - -	7788	15,906,375 – 15,906,474	-	6	120	82.89	-1.54	0.69	0.505116
4850	2R_DroMel_CAF1	15,907,186 – 15,907,292	- - - - - - - - -	7789	15,907,186 – 15,907,292	-	6	114	95.71	-1.06	0.91	0.625990
4851	2R_DroMel_CAF1	15,908,505 – 15,908,618	- - - - - - - - -	7790	15,908,505 – 15,908,618	-	5	120	91.64	-1.40	0.82	0.643216
4852	2R_DroMel_CAF1	15,908,883 – 15,909,027	- - - - - - - - -	7791	15,908,883 – 15,908,975	+	6	101	81.75	-1.59	0.64	0.542931
4852	2R_DroMel_CAF1	15,908,883 – 15,909,027	- - - - - - - - -	7792	15,908,935 – 15,909,027	+	6	97	77.09	-1.60	0.59	0.706590
4853	2R_DroMel_CAF1	15,914,329 – 15,914,477	- - - - - - - - -	7793	15,914,329 – 15,914,439	-	5	114	72.67	-1.79	0.43	0.686415
4853	2R_DroMel_CAF1	15,914,329 – 15,914,477	- - - - - - - - -	7794	15,914,362 – 15,914,477	-	5	120	68.71	-1.59	0.50	0.570953
4854	2R_DroMel_CAF1	15,915,337 – 15,915,437	- - - - - - - - -	7795	15,915,337 – 15,915,437	+	6	120	79.63	-2.15	0.56	0.797500
4855	2R_DroMel_CAF1	15,915,537 – 15,915,682	- - - - - - - - -	7796	15,915,537 – 15,915,648	-	5	114	93.86	-1.35	0.85	0.666705
4855	2R_DroMel_CAF1	15,915,537 – 15,915,682	- - - - - - - - -	7797	15,915,572 – 15,915,682	-	5	119	84.92	-2.24	0.74	0.915890
4856	2R_DroMel_CAF1	15,916,324 – 15,916,414	- - - - - - - - -	7798	15,916,324 – 15,916,414	+	5	110	75.61	-2.16	0.45	0.938067
4857	2R_DroMel_CAF1	15,917,577 – 15,917,675	- - - - - - - - -	7799	15,917,577 – 15,917,675	-	6	120	80.63	-1.94	0.56	0.573858
4858	2R_DroMel_CAF1	15,919,848 – 15,919,942	- - - - - - - - -	7800	15,919,848 – 15,919,942	+	6	120	78.15	-1.66	0.58	0.642611
4858	2R_DroMel_CAF1	15,919,848 – 15,919,942	- - - - - - - - -	7801	15,919,848 – 15,919,942	-	6	120	78.15	-2.48	0.37	0.594302
4859	2R_DroMel_CAF1	15,921,266 – 15,921,373	- - - - - - - - -	7802	15,921,266 – 15,921,373	-	5	119	90.78	-2.58	0.72	0.864646
4860	2R_DroMel_CAF1	15,921,405 – 15,921,505	- - - - - - - - -	7803	15,921,405 – 15,921,505	+	6	120	88.99	-1.60	0.86	0.627751
4861	2R_DroMel_CAF1	15,922,528 – 15,922,628	- - - - - - - - -	7804	15,922,528 – 15,922,628	+	6	107	93.68	-2.02	0.90	0.985712
4862	2R_DroMel_CAF1	15,923,387 – 15,923,561	- - - - - - - - -	7805	15,923,387 – 15,923,486	+	6	109	82.02	-1.53	0.67	0.544908
4862	2R_DroMel_CAF1	15,923,387 – 15,923,561	- - - - - - - - -	7806	15,923,453 – 15,923,561	+	6	120	83.04	-3.28	0.61	0.836745
4863	2R_DroMel_CAF1	15,925,596 – 15,925,694	- - - - - - - - -	7807	15,925,596 – 15,925,694	+	6	105	79.25	-1.37	0.78	0.792787
4864	2R_DroMel_CAF1	15,926,741 – 15,926,842	- - - - - - - - -	7808	15,926,741 – 15,926,842	+	5	102	90.04	-1.24	0.86	0.505481
4865	2R_DroMel_CAF1	15,927,931 – 15,928,045	- - - - - - - - -	7809	15,927,931 – 15,928,045	-	4	114	76.90	-1.47	0.73	0.595718
4866	2R_DroMel_CAF1	15,928,218 – 15,928,349	- - - - - - - - -	7810	15,928,218 – 15,928,313	-	6	120	79.97	-1.47	0.69	0.717625
4866	2R_DroMel_CAF1	15,928,218 – 15,928,349	- - - - - - - - -	7811	15,928,248 – 15,928,349	-	6	105	93.55	-1.81	0.84	0.691152
4867	2R_DroMel_CAF1	15,931,124 – 15,931,215	- - - - - - - - -	7812	15,931,124 – 15,931,215	+	6	120	82.96	-2.67	0.63	0.729558
4867	2R_DroMel_CAF1	15,931,124 – 15,931,215	- - - - - - - - -	7813	15,931,124 – 15,931,215	-	6	120	82.96	-3.21	0.61	0.827145
4868	2R_DroMel_CAF1	15,936,294 – 15,936,398	- - - - - - - - -	7814	15,936,294 – 15,936,398	+	5	108	84.87	-3.49	0.50	0.847943
4869	2R_DroMel_CAF1	15,938,115 – 15,938,221	- - - - - - - - -	7815	15,938,115 – 15,938,221	+	6	109	82.50	-2.07	0.59	0.500000
4870	2R_DroMel_CAF1	15,939,065 – 15,939,160	- - - - - - - - -	7816	15,939,065 – 15,939,160	+	3	96	97.92	-2.52	1.00	0.979528
4870	2R_DroMel_CAF1	15,939,065 – 15,939,160	- - - - - - - - -	7817	15,939,065 – 15,939,160	-	3	96	97.92	-3.49	1.00	0.994120
4871	2R_DroMel_CAF1	15,939,262 – 15,939,353	- - - - - - - - -	7818	15,939,262 – 15,939,353	+	3	96	90.24	-1.91	0.88	0.715315
4872	2R_DroMel_CAF1	15,940,239 – 15,940,346	- - - - - - - - -	7819	15,940,239 – 15,940,346	-	6	120	77.24	-2.09	0.42	0.525752
4873	2R_DroMel_CAF1	15,941,142 – 15,941,258	- - "RNAmicro=f:15941142_t:15941261_strand:+_p:0.673997" - - - - - -	7820	15,941,142 – 15,941,258	+	3	120	91.67	-2.39	0.79	0.670965
4874	2R_DroMel_CAF1	15,941,578 – 15,941,687	- - - - - - - - -	7821	15,941,578 – 15,941,687	+	4	118	84.49	-1.85	0.67	0.709007
4875	2R_DroMel_CAF1	15,942,478 – 15,942,568	- - - - - - - - -	7822	15,942,478 – 15,942,568	-	4	110	77.91	-1.52	0.72	0.596323
4876	2R_DroMel_CAF1	15,943,257 – 15,943,349	- - - - - - - - -	7823	15,943,257 – 15,943,349	+	4	101	82.70	-1.96	0.57	0.500000
4877	2R_DroMel_CAF1	15,953,971 – 15,954,071	- - - - - - - - -	7824	15,953,971 – 15,954,071	+	6	108	83.77	-2.51	0.65	0.606391
4878	2R_DroMel_CAF1	15,956,188 – 15,956,278	- - - - - - - - -	7825	15,956,188 – 15,956,278	+	6	99	84.87	-2.38	0.75	0.698843
4879	2R_DroMel_CAF1	15,956,307 – 15,956,406	- - - - - - - - -	7826	15,956,307 – 15,956,406	-	5	106	72.67	-1.76	0.35	0.640129
4880	2R_DroMel_CAF1	15,957,528 – 15,957,628	- - - - - - - - -	7827	15,957,528 – 15,957,628	+	6	118	83.23	-2.02	0.71	0.659170
4880	2R_DroMel_CAF1	15,957,528 – 15,957,628	- - - - - - - - -	7828	15,957,528 – 15,957,628	-	6	118	83.23	-1.72	0.74	0.615343
4881	2R_DroMel_CAF1	15,957,867 – 15,957,990	- - - - - - - - -	7829	15,957,867 – 15,957,964	+	5	97	93.81	-2.63	0.88	0.999584
				7830	15,957,867 – 15,957,964	-	5	97	93.81	-1.69	0.87	0.961565
				7831	15,957,895 – 15,957,990	+	5	95	92.84	-1.55	0.82	0.763058
4882	2R_DroMel_CAF1	15,961,345 – 15,961,445	- - - - - - - - -	7832	15,961,345 – 15,961,445	+	6	114	69.07	-1.49	0.56	0.806351
4883	2R_DroMel_CAF1	15,967,696 – 15,967,790	- - - - - - - - -	7833	15,967,696 – 15,967,790	-	6	106	82.37	-3.17	0.62	0.881750
4884	2R_DroMel_CAF1	15,970,602 – 15,970,697	- - - - - - - - -	7834	15,970,602 – 15,970,697	-	6	98	80.42	-2.13	0.50	0.500000
4885	2R_DroMel_CAF1	15,974,997 – 15,975,088	- - - - - - - - -	7835	15,974,997 – 15,975,088	-	6	100	75.11	-1.88	0.47	0.682357
4886	2R_DroMel_CAF1	15,978,429 – 15,978,572	- - - - - - - - -	7836	15,978,429 – 15,978,538	+	5	120	89.77	-1.51	0.76	0.530177
4886	2R_DroMel_CAF1	15,978,429 – 15,978,572	- - - - - - - - -	7837	15,978,465 – 15,978,572	-	5	114	89.71	-1.77	0.85	0.940299
4887	2R_DroMel_CAF1	15,978,739 – 15,978,856	- - - "knownCDS=Parent=FBtr0086290;Name=CG33041-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33041-RA" - - - - -	7838	15,978,739 – 15,978,856	+	6	120	80.30	-1.46	0.63	0.529479
4888	2R_DroMel_CAF1	15,979,445 – 15,979,548	- - - - - - - - -	7839	15,979,445 – 15,979,548	+	6	105	77.93	-1.15	0.76	0.746348
4889	2R_DroMel_CAF1	15,982,686 – 15,982,776	- - - - - - - - -	7840	15,982,686 – 15,982,776	+	6	112	79.06	-1.31	0.68	0.656113
4890	2R_DroMel_CAF1	15,984,630 – 15,984,720	- - - - - - - - -	7841	15,984,630 – 15,984,720	+	6	100	81.46	-2.85	0.68	0.919947
4891	2R_DroMel_CAF1	15,988,755 – 15,988,871	- - - "knownCDS=Parent=FBtr0086291;Name=CG30143-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30143-RA" - - - - -	7842	15,988,755 – 15,988,871	+	6	120	84.56	-1.99	0.73	0.546085
4892	2R_DroMel_CAF1	15,990,268 – 15,990,378	- - - - - - - - -	7843	15,990,268 – 15,990,378	+	6	120	82.02	-2.60	0.56	0.727579
4893	2R_DroMel_CAF1	15,991,944 – 15,992,039	- - - - - - - - -	7844	15,991,944 – 15,992,039	-	5	110	88.62	-1.82	0.71	0.593491
4894	2R_DroMel_CAF1	16,002,559 – 16,002,658	- - - - - - - - -	7845	16,002,559 – 16,002,658	-	6	112	77.07	-1.57	0.58	0.642994
4895	2R_DroMel_CAF1	16,003,867 – 16,003,970	- - - - - - - - -	7846	16,003,867 – 16,003,970	+	6	116	78.40	-2.04	0.50	0.679104
4896	2R_DroMel_CAF1	16,004,038 – 16,004,130	- - - - - - - - -	7847	16,004,038 – 16,004,130	+	6	108	81.51	-2.18	0.55	0.586437
4897	2R_DroMel_CAF1	16,004,339 – 16,004,432	- - - - - - - - -	7848	16,004,339 – 16,004,432	+	6	97	82.60	-1.58	0.74	0.614636
4898	2R_DroMel_CAF1	16,008,779 – 16,008,895	- - - - - - - - -	7849	16,008,779 – 16,008,869	+	6	102	80.98	-2.12	0.67	0.838229
4898	2R_DroMel_CAF1	16,008,779 – 16,008,895	- - - - - - - - -	7850	16,008,801 – 16,008,895	+	6	97	80.49	-1.59	0.85	0.827229
4899	2R_DroMel_CAF1	16,009,706 – 16,009,813	- - - - - - - - -	7851	16,009,706 – 16,009,813	+	6	107	94.13	-2.22	0.83	0.786853
4899	2R_DroMel_CAF1	16,009,706 – 16,009,813	- - - - - - - - -	7852	16,009,706 – 16,009,813	-	6	107	94.13	-1.88	0.85	0.826062
4900	2R_DroMel_CAF1	16,014,132 – 16,014,244	- - - - - - - - -	7853	16,014,132 – 16,014,244	-	5	112	76.36	-2.18	0.72	0.987669
4901	2R_DroMel_CAF1	16,015,577 – 16,015,682	- - - - - - - - -	7854	16,015,577 – 16,015,682	-	6	120	75.81	-1.86	0.46	0.512076
4902	2R_DroMel_CAF1	16,018,038 – 16,018,131	- - - - - - - - -	7855	16,018,038 – 16,018,131	+	6	93	91.41	-1.53	0.86	0.636564
4903	2R_DroMel_CAF1	16,021,017 – 16,021,113	- - - - - - - - -	7856	16,021,017 – 16,021,113	-	6	107	85.99	-1.54	0.85	0.555898
4904	2R_DroMel_CAF1	16,022,725 – 16,022,823	- - - - - - - - -	7857	16,022,725 – 16,022,823	+	5	98	75.76	-1.97	0.73	0.978126
4905	2R_DroMel_CAF1	16,027,457 – 16,027,550	- - - - - - - - -	7858	16,027,457 – 16,027,550	+	5	93	85.70	-2.17	0.69	0.800313
4906	2R_DroMel_CAF1	16,029,601 – 16,029,697	- - - - - - - - -	7859	16,029,601 – 16,029,697	-	6	120	77.79	-1.85	0.53	0.649374
4907	2R_DroMel_CAF1	16,032,718 – 16,032,815	- - - - - - - - -	7860	16,032,718 – 16,032,815	+	6	115	81.34	-1.57	0.65	0.582820
4908	2R_DroMel_CAF1	16,033,343 – 16,033,454	- - - - - - - - -	7861	16,033,343 – 16,033,454	+	5	111	87.40	-1.62	0.75	0.594462
4909	2R_DroMel_CAF1	16,040,401 – 16,040,495	- - - - - - - - -	7862	16,040,401 – 16,040,495	+	6	99	82.67	-1.94	0.82	0.826685
4909	2R_DroMel_CAF1	16,040,401 – 16,040,495	- - - - - - - - -	7863	16,040,401 – 16,040,495	-	6	99	82.67	-2.81	0.68	0.843590
4910	2R_DroMel_CAF1	16,040,596 – 16,040,735	- - - - - - - - -	7864	16,040,596 – 16,040,698	-	5	102	96.15	-1.05	0.96	0.537074
				7865	16,040,618 – 16,040,735	+	5	117	94.87	-1.60	0.88	0.934811
				7866	16,040,618 – 16,040,735	-	5	117	94.87	-2.11	0.89	0.996800
4911	2R_DroMel_CAF1	16,045,522 – 16,045,625	- - - - - - - - -	7867	16,045,522 – 16,045,625	+	5	103	96.89	-1.30	0.87	0.529549
4912	2R_DroMel_CAF1	16,058,345 – 16,058,455	- - - - - - - - -	7868	16,058,345 – 16,058,455	-	6	110	86.18	-2.06	0.80	0.663607
4913	2R_DroMel_CAF1	16,060,831 – 16,060,925	- - - - - - - - -	7869	16,060,831 – 16,060,925	+	6	96	96.75	-1.53	0.94	0.984630
4914	2R_DroMel_CAF1	16,064,213 – 16,064,435	- - - "knownCDS=Parent=FBtr0086263;Name=CG18066-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18066-RA" - - - - -	7870	16,064,213 – 16,064,322	+	6	120	79.82	-1.11	0.73	0.561908
4914	2R_DroMel_CAF1	16,064,213 – 16,064,435		7871	16,064,322 – 16,064,435	+	6	120	82.41	-1.49	0.71	0.565503
4915	2R_DroMel_CAF1	16,065,002 – 16,065,131	- - - - - - - - -	7872	16,065,002 – 16,065,097	+	5	95	97.68	-1.96	0.90	0.983938
4915	2R_DroMel_CAF1	16,065,002 – 16,065,131	- - - - - - - - -	7873	16,065,030 – 16,065,131	+	5	101	97.82	-1.67	0.97	0.984941
4916	2R_DroMel_CAF1	16,065,705 – 16,065,825	- - - "knownCDS=Parent=FBtr0100496;Name=CG13430-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13430-RB" - - - - -	7874	16,065,705 – 16,065,825	+	6	120	80.72	-1.47	0.68	0.645912
4917	2R_DroMel_CAF1	16,066,409 – 16,066,569	- - - "knownCDS=Parent=FBtr0100677;Name=CG18065-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18065-RA" - - - - -	7875	16,066,409 – 16,066,529	-	6	120	93.28	-2.49	0.90	0.996994
4917	2R_DroMel_CAF1	16,066,409 – 16,066,569		7876	16,066,449 – 16,066,569	-	6	120	90.50	-2.18	0.79	0.500000
4918	2R_DroMel_CAF1	16,067,361 – 16,067,502	- - - - - - - - -	7877	16,067,361 – 16,067,481	-	5	120	94.67	-1.59	0.83	0.784107
4918	2R_DroMel_CAF1	16,067,361 – 16,067,502	- - - - - - - - -	7878	16,067,401 – 16,067,502	+	5	120	86.54	-1.59	0.78	0.624823
4919	2R_DroMel_CAF1	16,068,996 – 16,069,103	- - - - - - - - -	7879	16,068,996 – 16,069,103	-	5	120	85.68	-1.85	0.69	0.635534
4920	2R_DroMel_CAF1	16,070,789 – 16,070,895	- - - - - - - - -	7880	16,070,789 – 16,070,895	+	5	120	84.72	-1.75	0.91	0.877842
4920	2R_DroMel_CAF1	16,070,789 – 16,070,895	- - - - - - - - -	7881	16,070,789 – 16,070,895	-	5	120	84.72	-1.81	0.78	0.778195
4921	2R_DroMel_CAF1	16,071,480 – 16,071,600	- - - - - - - - -	7882	16,071,480 – 16,071,600	+	5	120	86.85	-2.72	0.64	0.773051
4922	2R_DroMel_CAF1	16,072,544 – 16,072,640	- - - - - - - - -	7883	16,072,544 – 16,072,640	+	4	107	87.12	-3.05	0.66	0.895007
4922	2R_DroMel_CAF1	16,072,544 – 16,072,640	- - - - - - - - -	7884	16,072,544 – 16,072,640	-	4	107	87.12	-2.29	0.64	0.684691
4923	2R_DroMel_CAF1	16,074,643 – 16,074,759	- - - - - - - - -	7885	16,074,643 – 16,074,759	+	4	116	90.72	-2.67	0.77	0.925964
4923	2R_DroMel_CAF1	16,074,643 – 16,074,759	- - - - - - - - -	7886	16,074,643 – 16,074,759	-	4	116	90.72	-2.27	0.71	0.672284
4924	2R_DroMel_CAF1	16,077,093 – 16,077,195	- - - - - - - - -	7887	16,077,093 – 16,077,195	+	5	102	95.49	-1.66	0.87	0.936265
4925	2R_DroMel_CAF1	16,079,546 – 16,079,638	- - - - - - - - -	7888	16,079,546 – 16,079,638	+	6	94	86.98	-1.56	0.85	0.568258
4925	2R_DroMel_CAF1	16,079,546 – 16,079,638	- - - - - - - - -	7889	16,079,546 – 16,079,638	-	6	94	86.98	-2.32	0.82	0.795218
4926	2R_DroMel_CAF1	16,083,496 – 16,083,627	- - - - - - - - -	7890	16,083,496 – 16,083,601	-	6	105	86.29	-3.30	0.80	0.939915
4926	2R_DroMel_CAF1	16,083,496 – 16,083,627	- - - - - - - - -	7891	16,083,531 – 16,083,627	-	6	109	78.93	-2.61	0.62	0.964737
4927	2R_DroMel_CAF1	16,085,725 – 16,085,819	- - - - - - - - -	7892	16,085,725 – 16,085,819	-	5	103	81.05	-1.56	0.69	0.538729
4928	2R_DroMel_CAF1	16,086,075 – 16,086,178	- - - - - - - - -	7893	16,086,075 – 16,086,178	-	5	106	90.50	-1.53	0.77	0.596926
4929	2R_DroMel_CAF1	16,088,916 – 16,089,012	- - - - - - - - -	7894	16,088,916 – 16,089,012	+	5	117	82.91	-2.16	0.60	0.729402
4930	2R_DroMel_CAF1	16,091,336 – 16,091,655	- - - - - - - - -	7895	16,091,336 – 16,091,429	+	6	110	75.94	-2.51	0.64	0.989301
				7896	16,091,336 – 16,091,429	-	6	110	75.94	-2.94	0.60	0.994938
				7897	16,091,370 – 16,091,469	+	5	113	89.58	-1.79	0.79	0.826654
				7898	16,091,370 – 16,091,469	-	5	113	89.58	-2.20	0.77	0.923740
				7899	16,091,469 – 16,091,575	+	5	106	89.87	-1.79	0.83	0.920113
				7900	16,091,469 – 16,091,575	-	5	106	89.87	-1.62	0.90	0.943967
				7901	16,091,535 – 16,091,655	+	5	120	93.92	-1.50	0.91	0.947011
4931	2R_DroMel_CAF1	16,097,307 – 16,097,436	- - - - - - - - -	7902	16,097,307 – 16,097,405	-	5	100	85.55	-1.59	0.73	0.544336
4931	2R_DroMel_CAF1	16,097,307 – 16,097,436	- - - - - - - - -	7903	16,097,329 – 16,097,436	-	5	109	91.36	-1.66	0.75	0.581881
4932	2R_DroMel_CAF1	16,098,609 – 16,098,703	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002281; Name=dme-mir-310" - "RNAmicro=f:16098609_t:16098704_strand:-_p:0.999992" - - - "miRBase=dme-mir-310\|2e-46" - "Flybase=FBgn0067694:mir-310:microRNA_encoding_gene\|6e-07"	7904	16,098,609 – 16,098,703	+	6	96	86.69	-4.63	0.84	0.994443
4932	2R_DroMel_CAF1	16,098,609 – 16,098,703		7905	16,098,609 – 16,098,703	-	6	96	86.69	-5.76	0.96	0.997313
4933	2R_DroMel_CAF1	16,098,900 – 16,098,997	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002285; Name=dme-mir-312" - "RNAmicro=f:16098900_t:16098999_strand:-_p:0.997852" - - - "miRBase=dme-mir-312\|9e-33" - "Flybase=FBgn0067692:mir-312:microRNA_encoding_gene\|7e-07"	7906	16,098,900 – 16,098,997	+	6	100	78.74	-2.40	0.57	0.936002
4933	2R_DroMel_CAF1	16,098,900 – 16,098,997		7907	16,098,900 – 16,098,997	-	6	100	78.74	-3.28	0.81	0.974147
4934	2R_DroMel_CAF1	16,099,025 – 16,099,127	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002287; Name=dme-mir-313" - - - - - "miRBase=dme-mir-313\|3e-23" - "Flybase=FBgn0067691:mir-313:microRNA_encoding_gene\|7e-07"	7908	16,099,025 – 16,099,127	-	6	107	73.70	-1.93	0.56	0.935931
4935	2R_DroMel_CAF1	16,100,047 – 16,100,154	- - - - - - - - -	7909	16,100,047 – 16,100,154	-	6	115	74.17	-3.10	0.42	0.997009
4936	2R_DroMel_CAF1	16,100,167 – 16,100,303	- - "RNAmicro=f:16100167_t:16100286_strand:-_p:0.801247" - - - - - -	7910	16,100,167 – 16,100,269	+	6	120	67.42	-2.76	0.51	0.997123
				7911	16,100,167 – 16,100,269	-	6	120	67.42	-2.76	0.68	0.992425
				7912	16,100,191 – 16,100,303	+	6	120	65.59	-1.48	0.49	0.715068
				7913	16,100,191 – 16,100,303	-	6	120	65.59	-1.30	0.63	0.824420
4937	2R_DroMel_CAF1	16,101,635 – 16,101,730	- - - - - - - - -	7914	16,101,635 – 16,101,730	-	6	95	77.27	-1.78	0.65	0.903247
4938	2R_DroMel_CAF1	16,103,567 – 16,103,667	- - - - - - - - -	7915	16,103,567 – 16,103,667	-	5	101	95.43	-1.95	0.85	0.974319
4939	2R_DroMel_CAF1	16,109,110 – 16,109,206	- - - - - - - - -	7916	16,109,110 – 16,109,206	+	5	105	89.53	-2.15	0.99	0.999461
4940	2R_DroMel_CAF1	16,110,280 – 16,110,383	- - - - - - - - -	7917	16,110,280 – 16,110,383	+	5	115	87.38	-2.39	0.69	0.808726
4941	2R_DroMel_CAF1	16,117,220 – 16,117,312	- - - - - - - - -	7918	16,117,220 – 16,117,312	-	5	93	79.59	-2.38	0.39	0.869430
4942	2R_DroMel_CAF1	16,118,110 – 16,118,224	- - - - - - - - -	7919	16,118,110 – 16,118,224	+	5	114	84.14	-1.77	0.66	0.555298
4943	2R_DroMel_CAF1	16,120,189 – 16,120,292	- - - "knownCDS=Parent=FBtr0086222;Name=bl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13425-RD" - - - - -	7920	16,120,189 – 16,120,292	+	6	103	84.08	-1.85	0.71	0.524389
4944	2R_DroMel_CAF1	16,120,619 – 16,120,738	- - - "knownCDS=Parent=FBtr0086222;Name=bl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13425-RD" - - - - -	7921	16,120,619 – 16,120,738	-	6	120	89.87	-1.41	0.88	0.621691
4945	2R_DroMel_CAF1	16,120,916 – 16,121,030	"known=stem_loop_ID=Dmel\CG_RFAM_MIR_48002289; Name=dme-mir-7" - "RNAmicro=f:16120916_t:16121034_strand:-_p:0.976363" - "Rfam=AE003791.4/91950-92037_RF00053;mir-7;\|2e-44" - "miRBase=dme-mir-7\|8e-46" - "Flybase=FBgn0046816:mir-7:microRNA_encoding_gene\|2e-07"	7922	16,120,916 – 16,121,030	+	6	119	82.54	-3.24	0.78	0.943390
4945	2R_DroMel_CAF1	16,120,916 – 16,121,030		7923	16,120,916 – 16,121,030	-	6	119	82.54	-2.25	0.66	0.731431
4946	2R_DroMel_CAF1	16,122,806 – 16,122,906	- - - - - - - - -	7924	16,122,806 – 16,122,906	+	6	113	79.62	-1.51	0.66	0.691201
4947	2R_DroMel_CAF1	16,125,714 – 16,125,812	- - - - - - - - -	7925	16,125,714 – 16,125,812	+	5	98	97.55	-1.38	0.89	0.658611
4947	2R_DroMel_CAF1	16,125,714 – 16,125,812	- - - - - - - - -	7926	16,125,714 – 16,125,812	-	5	98	97.55	-1.75	0.94	0.986614
4948	2R_DroMel_CAF1	16,126,251 – 16,126,394	- - - - - - - - -	7927	16,126,251 – 16,126,357	-	5	108	82.73	-1.97	0.72	0.833929
4948	2R_DroMel_CAF1	16,126,251 – 16,126,394	- - - - - - - - -	7928	16,126,283 – 16,126,394	-	4	115	79.06	-1.46	0.75	0.537503
4949	2R_DroMel_CAF1	16,131,682 – 16,131,784	- - - - - - - - -	7929	16,131,682 – 16,131,784	-	6	116	81.93	-2.18	0.66	0.763416
4950	2R_DroMel_CAF1	16,133,027 – 16,133,125	- - - - - - - - -	7930	16,133,027 – 16,133,125	+	5	98	96.73	-1.55	0.98	0.982304
4951	2R_DroMel_CAF1	16,146,512 – 16,146,615	- - - - - - - - -	7931	16,146,512 – 16,146,615	+	5	103	96.29	-2.41	0.89	0.998676
4951	2R_DroMel_CAF1	16,146,512 – 16,146,615	- - - - - - - - -	7932	16,146,512 – 16,146,615	-	5	103	96.29	-2.06	0.91	0.997174
4952	2R_DroMel_CAF1	16,155,018 – 16,155,138	- - - "knownCDS=Parent=FBtr0086252;Name=rig-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30149-RB" - - - - -	7933	16,155,018 – 16,155,138	-	6	120	82.94	-1.92	0.68	0.613903
4953	2R_DroMel_CAF1	16,155,460 – 16,155,576	- - - - - - - - -	7934	16,155,460 – 16,155,576	-	6	119	76.17	-1.59	0.53	0.500000
4954	2R_DroMel_CAF1	16,157,427 – 16,157,519	- - - "knownCDS=Parent=FBtr0091787;Name=CG33786-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33786-RA" - - - - -	7935	16,157,427 – 16,157,519	-	6	101	76.88	-1.56	0.56	0.525487
4955	2R_DroMel_CAF1	16,157,959 – 16,158,079	- - - "knownCDS=Parent=FBtr0091787;Name=CG33786-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33786-RA" - - - - -	7936	16,157,959 – 16,158,079	+	6	120	74.33	-2.12	0.43	0.840271
4956	2R_DroMel_CAF1	16,163,902 – 16,164,109	- - - - - - - - -	7937	16,163,902 – 16,164,013	+	6	117	94.49	-1.12	0.96	0.903527
				7938	16,163,942 – 16,164,037	+	6	117	80.96	-1.38	0.72	0.640313
				7939	16,164,013 – 16,164,109	+	6	117	76.32	-2.96	0.34	0.954718
4957	2R_DroMel_CAF1	16,164,535 – 16,164,631	- - - - - - - - -	7940	16,164,535 – 16,164,631	-	5	112	86.62	-1.82	0.70	0.610484
4958	2R_DroMel_CAF1	16,165,321 – 16,165,411	- - - - - - - - -	7941	16,165,321 – 16,165,411	-	6	94	91.75	-1.96	0.86	0.863596
4959	2R_DroMel_CAF1	16,165,535 – 16,165,633	- - - - - - - - -	7942	16,165,535 – 16,165,633	+	6	98	93.61	-4.43	0.92	0.999932
4959	2R_DroMel_CAF1	16,165,535 – 16,165,633	- - - - - - - - -	7943	16,165,535 – 16,165,633	-	6	98	93.61	-3.74	0.89	0.999778
4960	2R_DroMel_CAF1	16,169,832 – 16,169,926	- - - "knownCDS=Parent=FBtr0086249;Name=CG16799-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16799-RA" - - - - -	7944	16,169,832 – 16,169,926	-	5	94	94.02	-1.74	0.88	0.974299
4961	2R_DroMel_CAF1	16,172,651 – 16,172,771	- - - - - - - - -	7945	16,172,651 – 16,172,771	-	5	120	84.58	-2.55	0.59	0.770063
4962	2R_DroMel_CAF1	16,174,051 – 16,174,171	- - - "knownCDS=Parent=FBtr0086233;Name=CG11136-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11136-RA" - - - - -	7946	16,174,051 – 16,174,171	+	6	120	81.83	-1.70	0.65	0.604889
4963	2R_DroMel_CAF1	16,181,323 – 16,181,414	- - - - - - - - -	7947	16,181,323 – 16,181,414	+	4	105	65.92	-1.47	0.64	0.947744
4964	2R_DroMel_CAF1	16,183,438 – 16,183,543	- - - "knownCDS=Parent=FBtr0086242, FBtr0086243;Name=exu-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8994-RA, FlyBase+Annotation+IDs:CG8994-RB" - - - - -	7948	16,183,438 – 16,183,543	-	6	105	85.20	-2.98	0.68	0.609451
4965	2R_DroMel_CAF1	16,183,651 – 16,183,828	- - - "knownCDS=Parent=FBtr0086244;Name=exu-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8994-RC" - - - - -	7949	16,183,651 – 16,183,756	-	6	105	78.86	-1.83	0.53	0.545205
4965	2R_DroMel_CAF1	16,183,651 – 16,183,828		7950	16,183,719 – 16,183,828	-	6	112	72.33	-1.33	0.65	0.843707
4966	2R_DroMel_CAF1	16,184,330 – 16,184,433	- - - "knownCDS=Parent=FBtr0086244;Name=exu-cds, ;Dbxref=FlyBase+Annotation+IDs:CG8994-RC" - - - - -	7951	16,184,330 – 16,184,433	-	5	103	81.14	-1.66	0.73	0.692757
4967	2R_DroMel_CAF1	16,188,336 – 16,188,451	- - - - - - - - -	7952	16,188,336 – 16,188,451	-	5	120	70.71	-1.59	0.54	0.625408
4968	2R_DroMel_CAF1	16,192,463 – 16,192,559	- - - - - - - - -	7953	16,192,463 – 16,192,559	-	6	104	70.82	-2.30	0.40	0.967847
4969	2R_DroMel_CAF1	16,196,510 – 16,196,625	- - - - - - - - -	7954	16,196,510 – 16,196,625	-	6	120	76.77	-2.11	0.56	0.928343
4970	2R_DroMel_CAF1	16,199,047 – 16,199,159	- - - - - - - - -	7955	16,199,047 – 16,199,159	-	5	120	90.04	-1.54	0.75	0.539840
4971	2R_DroMel_CAF1	16,202,447 – 16,202,540	- - - - - - - - -	7956	16,202,447 – 16,202,540	+	6	95	82.70	-3.00	0.66	0.858401
4971	2R_DroMel_CAF1	16,202,447 – 16,202,540	- - - - - - - - -	7957	16,202,447 – 16,202,540	-	6	95	82.70	-3.26	0.80	0.948847
4972	2R_DroMel_CAF1	16,215,477 – 16,215,608	- - - - - - - - -	7958	16,215,477 – 16,215,581	-	5	116	72.28	-2.47	0.26	0.993981
4972	2R_DroMel_CAF1	16,215,477 – 16,215,608	- - - - - - - - -	7959	16,215,511 – 16,215,608	-	5	115	72.21	-1.88	0.19	0.874454
4973	2R_DroMel_CAF1	16,219,655 – 16,219,759	- - - - - - - - -	7960	16,219,655 – 16,219,759	-	6	110	82.76	-1.46	0.76	0.566448
4974	2R_DroMel_CAF1	16,219,938 – 16,220,038	- - - - - - - - -	7961	16,219,938 – 16,220,038	+	5	110	77.53	-2.53	0.61	0.991303
4974	2R_DroMel_CAF1	16,219,938 – 16,220,038	- - - - - - - - -	7962	16,219,938 – 16,220,038	-	5	110	77.53	-2.18	0.61	0.955857
4975	2R_DroMel_CAF1	16,220,646 – 16,220,741	- - - - - - - - -	7963	16,220,646 – 16,220,741	+	6	113	79.24	-1.98	0.53	0.645013
4975	2R_DroMel_CAF1	16,220,646 – 16,220,741	- - - - - - - - -	7964	16,220,646 – 16,220,741	-	6	113	79.24	-1.78	0.56	0.578465
4976	2R_DroMel_CAF1	16,222,234 – 16,222,334	- - - - - - - - -	7965	16,222,234 – 16,222,334	-	6	111	84.66	-2.92	0.82	0.933993
4977	2R_DroMel_CAF1	16,223,408 – 16,223,548	- - - - - - - - -	7966	16,223,408 – 16,223,498	+	4	90	84.88	-1.54	0.69	0.560658
				7967	16,223,443 – 16,223,533	+	4	90	85.47	-3.97	0.81	0.997259
				7968	16,223,443 – 16,223,533	-	4	90	85.47	-1.60	0.68	0.580539
				7969	16,223,458 – 16,223,548	+	5	90	85.53	-2.77	0.87	0.997937
				7970	16,223,458 – 16,223,548	-	5	90	85.53	-2.78	0.85	0.997422
4978	2R_DroMel_CAF1	16,228,258 – 16,228,369	- - - - - - - - -	7971	16,228,258 – 16,228,369	-	4	113	91.52	-1.91	0.79	0.751324
4979	2R_DroMel_CAF1	16,229,880 – 16,229,973	- - - - - - - - -	7972	16,229,880 – 16,229,973	-	5	109	80.71	-2.48	0.78	0.986269
4980	2R_DroMel_CAF1	16,233,987 – 16,234,155	- - - - - - - - -	7973	16,233,987 – 16,234,086	-	5	117	81.06	-1.96	0.52	0.535521
4980	2R_DroMel_CAF1	16,233,987 – 16,234,155	- - - - - - - - -	7974	16,234,049 – 16,234,155	-	5	106	93.58	-1.98	0.79	0.895611
4981	2R_DroMel_CAF1	16,235,000 – 16,235,143	- - - - - - - - -	7975	16,235,000 – 16,235,114	+	5	117	86.89	-1.93	0.71	0.684806
4981	2R_DroMel_CAF1	16,235,000 – 16,235,143	- - - - - - - - -	7976	16,235,037 – 16,235,143	+	5	106	89.25	-3.18	0.85	0.999606
4982	2R_DroMel_CAF1	16,238,819 – 16,238,921	- - - - - - - - -	7977	16,238,819 – 16,238,921	+	6	102	77.30	-1.66	0.61	0.793806
4982	2R_DroMel_CAF1	16,238,819 – 16,238,921	- - - - - - - - -	7978	16,238,819 – 16,238,921	-	6	102	77.30	-2.88	0.63	0.989989
4983	2R_DroMel_CAF1	16,240,347 – 16,240,439	- - - - - - - - -	7979	16,240,347 – 16,240,439	+	4	93	73.37	-2.77	0.37	0.746729
4984	2R_DroMel_CAF1	16,241,157 – 16,241,272	- - - - - - - - -	7980	16,241,157 – 16,241,272	+	4	115	78.95	-2.44	0.47	0.560942
4985	2R_DroMel_CAF1	16,241,423 – 16,241,614	- - - - - - - - -	7981	16,241,423 – 16,241,542	-	5	120	83.53	-1.96	0.65	0.685856
				7982	16,241,463 – 16,241,576	-	5	120	85.63	-2.50	0.68	0.894046
				7983	16,241,502 – 16,241,614	-	4	114	89.04	-2.30	0.75	0.879445
4986	2R_DroMel_CAF1	16,241,928 – 16,242,021	- - - - - - - - -	7984	16,241,928 – 16,242,021	+	6	104	81.25	-1.52	0.64	0.544582
4987	2R_DroMel_CAF1	16,243,766 – 16,243,896	- - - - - - - - -	7985	16,243,766 – 16,243,862	+	6	106	81.74	-2.21	0.75	0.868515
4987	2R_DroMel_CAF1	16,243,766 – 16,243,896	- - - - - - - - -	7986	16,243,793 – 16,243,896	+	6	107	75.72	-2.21	0.77	0.985018
4988	2R_DroMel_CAF1	16,247,281 – 16,247,378	- - - - - - - - -	7987	16,247,281 – 16,247,378	+	6	119	74.25	-2.06	0.54	0.950963
4989	2R_DroMel_CAF1	16,253,396 – 16,253,486	- - - - - - - - -	7988	16,253,396 – 16,253,486	+	4	90	64.24	-1.73	0.67	0.992436
4990	2R_DroMel_CAF1	16,253,755 – 16,253,850	- - - - - - - - -	7989	16,253,755 – 16,253,850	-	6	102	80.85	-2.45	0.54	0.765132
4991	2R_DroMel_CAF1	16,253,924 – 16,254,018	- - - - - - - - -	7990	16,253,924 – 16,254,018	-	6	120	79.39	-2.10	0.53	0.719138
4992	2R_DroMel_CAF1	16,262,962 – 16,263,311	- - "RNAmicro=f:16263191_t:16263310_strand:+_p:0.543459" - - - - - -	7991	16,262,962 – 16,263,052	+	5	91	80.31	-2.42	0.48	0.885975
				7992	16,263,052 – 16,263,165	-	5	117	70.66	-1.92	0.45	0.878972
				7993	16,263,165 – 16,263,271	+	6	120	78.97	-1.15	0.74	0.652672
				7994	16,263,165 – 16,263,271	-	6	120	78.97	-1.65	0.77	0.890530
				7995	16,263,191 – 16,263,311	+	6	120	85.25	-2.33	0.74	0.610750
				7996	16,263,191 – 16,263,311	-	6	120	85.25	-2.35	0.74	0.619663
4993	2R_DroMel_CAF1	16,265,046 – 16,265,143	- - - - - - - - -	7997	16,265,046 – 16,265,143	-	6	108	82.65	-2.97	0.47	0.527348
4994	2R_DroMel_CAF1	16,265,825 – 16,265,917	- - - "knownCDS=texon1660;Parent=CG_NCBI_GNO_32567904, CG_DGIL_SNO_28357527, CG_BATZ_CON_47004770" - - - - -	7998	16,265,825 – 16,265,917	+	6	97	69.40	-1.52	0.54	0.765197
4994	2R_DroMel_CAF1	16,265,825 – 16,265,917		7999	16,265,825 – 16,265,917	-	6	97	69.40	-1.83	0.69	0.983465
4995	2R_DroMel_CAF1	16,268,230 – 16,268,326	- - - "knownCDS=texon1664;Parent=CG_NCBI_GNO_32568166, CG_RGUI_GID_mRNA_40004045, CG_BATZ_CON_47004771" - - - - -	8000	16,268,230 – 16,268,326	-	4	99	86.07	-3.62	0.73	0.988797
4996	2R_DroMel_CAF1	16,276,204 – 16,276,313	- - - - - - - - -	8001	16,276,204 – 16,276,313	-	3	109	94.46	-1.72	0.93	0.640626
4997	2R_DroMel_CAF1	16,276,483 – 16,276,576	- - - - - - - - -	8002	16,276,483 – 16,276,576	-	6	113	73.44	-2.39	0.25	0.646280
4998	2R_DroMel_CAF1	16,279,083 – 16,279,186	- - - - - - - - -	8003	16,279,083 – 16,279,186	+	6	104	94.06	-2.09	0.84	0.824703
4999	2R_DroMel_CAF1	16,279,532 – 16,279,631	- - - - - - - - -	8004	16,279,532 – 16,279,631	-	6	118	79.70	-1.49	0.68	0.723003
5000	2R_DroMel_CAF1	16,281,101 – 16,281,206	- - - - - - - - -	8005	16,281,101 – 16,281,206	+	3	111	76.45	-2.38	0.51	0.671027
5001	2R_DroMel_CAF1	16,286,010 – 16,286,106	- - - - - - - - -	8006	16,286,010 – 16,286,106	+	5	100	93.65	-1.41	0.81	0.570053
5001	2R_DroMel_CAF1	16,286,010 – 16,286,106	- - - - - - - - -	8007	16,286,010 – 16,286,106	-	5	100	93.65	-1.61	0.92	0.981033
5002	2R_DroMel_CAF1	16,288,842 – 16,288,956	- - - "knownCDS=Parent=FBtr0086239;Name=CG13443-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13443-RA" - - - - -	8008	16,288,842 – 16,288,956	-	6	119	71.95	-1.89	0.41	0.708822
5003	2R_DroMel_CAF1	16,300,575 – 16,300,713	- - - "knownCDS=Parent=FBtr0071513;Name=CG15225-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15225-RA" - - - - -	8009	16,300,575 – 16,300,687	-	6	113	79.23	-1.54	0.67	0.764892
5003	2R_DroMel_CAF1	16,300,575 – 16,300,713		8010	16,300,614 – 16,300,713	-	6	105	77.82	-1.39	0.68	0.762517
5004	2R_DroMel_CAF1	16,303,774 – 16,303,885	- - - - - - - - -	8011	16,303,774 – 16,303,885	+	6	112	81.05	-2.09	0.62	0.759292
5005	2R_DroMel_CAF1	16,304,090 – 16,304,188	- - - - - - - - -	8012	16,304,090 – 16,304,188	-	6	118	76.25	-2.71	0.42	0.965799
5006	2R_DroMel_CAF1	16,304,842 – 16,304,992	- - - - - - - - -	8013	16,304,842 – 16,304,952	-	5	110	93.80	-2.42	0.81	0.983184
5006	2R_DroMel_CAF1	16,304,842 – 16,304,992	- - - - - - - - -	8014	16,304,872 – 16,304,992	-	6	120	93.33	-1.91	0.84	0.756875
5007	2R_DroMel_CAF1	16,305,566 – 16,305,661	- - - - - - - - -	8015	16,305,566 – 16,305,661	+	6	95	97.61	-1.29	0.95	0.948856
5008	2R_DroMel_CAF1	16,308,089 – 16,308,185	- - - - - - - - -	8016	16,308,089 – 16,308,185	+	5	106	75.41	-1.84	0.20	0.848114
5009	2R_DroMel_CAF1	16,311,345 – 16,311,446	- - - - - - - - -	8017	16,311,345 – 16,311,446	+	5	101	91.78	-1.95	0.83	0.960339
5010	2R_DroMel_CAF1	16,312,040 – 16,312,135	- - - - - - - - -	8018	16,312,040 – 16,312,135	+	5	113	77.70	-2.67	0.47	0.990926
5011	2R_DroMel_CAF1	16,312,283 – 16,312,376	- - - - - - - - -	8019	16,312,283 – 16,312,376	+	5	95	90.09	-1.80	0.81	0.883001
5012	2R_DroMel_CAF1	16,313,551 – 16,313,649	- - - - - - - - -	8020	16,313,551 – 16,313,649	+	5	114	79.49	-2.21	0.43	0.775386
5013	2R_DroMel_CAF1	16,315,913 – 16,316,004	- - - - - - - - -	8021	16,315,913 – 16,316,004	+	6	120	83.07	-2.33	0.81	0.879771
5014	2R_DroMel_CAF1	16,317,804 – 16,317,902	- - - - - - - - -	8022	16,317,804 – 16,317,902	-	5	98	94.48	-1.22	0.94	0.799220
5015	2R_DroMel_CAF1	16,318,445 – 16,318,545	- - - - - - - - -	8023	16,318,445 – 16,318,545	-	6	117	85.27	-2.76	0.86	0.965233
5016	2R_DroMel_CAF1	16,318,617 – 16,318,709	- - - - - - - - -	8024	16,318,617 – 16,318,709	+	6	97	80.63	-2.51	0.59	0.873347
5017	2R_DroMel_CAF1	16,318,782 – 16,318,884	- - - - - - - - -	8025	16,318,782 – 16,318,884	-	5	111	77.37	-2.03	0.33	0.785277
5018	2R_DroMel_CAF1	16,318,950 – 16,319,040	- - - - - - - - -	8026	16,318,950 – 16,319,040	-	6	101	80.14	-1.24	0.66	0.500000
5019	2R_DroMel_CAF1	16,322,558 – 16,322,659	- - - - - - - - -	8027	16,322,558 – 16,322,659	-	6	119	81.69	-1.58	0.64	0.518953
5020	2R_DroMel_CAF1	16,323,968 – 16,324,063	- - - - - - - - -	8028	16,323,968 – 16,324,063	+	6	115	79.63	-1.85	0.74	0.896390
5021	2R_DroMel_CAF1	16,324,471 – 16,324,580	- - - - - - - - -	8029	16,324,471 – 16,324,580	-	6	120	84.32	-2.62	0.83	0.923056
5022	2R_DroMel_CAF1	16,325,848 – 16,326,058	- - - - - - - - -	8030	16,325,848 – 16,325,950	+	4	118	85.67	-1.39	0.73	0.500000
5022	2R_DroMel_CAF1	16,325,848 – 16,326,058	- - - - - - - - -	8031	16,325,950 – 16,326,058	-	6	120	83.98	-1.98	0.77	0.683768
5023	2R_DroMel_CAF1	16,326,374 – 16,326,547	- - - - - - - - -	8032	16,326,374 – 16,326,467	+	5	94	97.54	-2.11	0.97	0.998930
				8033	16,326,407 – 16,326,507	+	6	120	89.00	-2.15	0.79	0.500000
				8034	16,326,407 – 16,326,507	-	6	120	89.00	-2.03	0.84	0.788779
				8035	16,326,427 – 16,326,547	+	6	120	95.78	-1.36	0.95	0.964864
				8036	16,326,427 – 16,326,547	-	6	120	95.78	-1.86	0.89	0.962063
5024	2R_DroMel_CAF1	16,326,661 – 16,326,764	- - - - - - - - -	8037	16,326,661 – 16,326,764	-	5	119	85.38	-1.74	1.00	0.958847
5025	2R_DroMel_CAF1	16,326,953 – 16,327,073	- - - - - - - - -	8038	16,326,953 – 16,327,073	+	4	120	95.36	-1.71	0.84	0.549031
5025	2R_DroMel_CAF1	16,326,953 – 16,327,073	- - - - - - - - -	8039	16,326,953 – 16,327,073	-	4	120	95.36	-1.55	0.94	0.701772
5026	2R_DroMel_CAF1	16,329,361 – 16,329,469	- - - - - - - - -	8040	16,329,361 – 16,329,469	-	5	120	72.38	-1.78	0.38	0.664191
5027	2R_DroMel_CAF1	16,329,657 – 16,329,771	- - - - - - - - -	8041	16,329,657 – 16,329,771	+	3	114	95.03	-1.73	0.90	0.558004
5027	2R_DroMel_CAF1	16,329,657 – 16,329,771	- - - - - - - - -	8042	16,329,657 – 16,329,771	-	3	114	95.03	-2.21	0.93	0.899827
5028	2R_DroMel_CAF1	16,330,226 – 16,330,331	- - - "knownCDS=Parent=FBtr0071562;Name=insc-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11312-RA" - - - - -	8043	16,330,226 – 16,330,331	-	6	105	95.30	-1.20	0.93	0.877557
5029	2R_DroMel_CAF1	16,332,807 – 16,332,923	- - - - - - - - -	8044	16,332,807 – 16,332,923	-	5	118	85.90	-1.67	0.74	0.617085
5030	2R_DroMel_CAF1	16,334,053 – 16,334,143	- - - - - - - - -	8045	16,334,053 – 16,334,143	+	6	109	72.73	-1.12	0.63	0.523590
5031	2R_DroMel_CAF1	16,342,490 – 16,342,601	- - - - - - - - -	8046	16,342,490 – 16,342,601	+	4	111	83.93	-2.15	0.76	0.925741
5031	2R_DroMel_CAF1	16,342,490 – 16,342,601	- - - - - - - - -	8047	16,342,490 – 16,342,601	-	4	111	83.93	-1.97	0.72	0.841583
5032	2R_DroMel_CAF1	16,342,709 – 16,342,806	- - - - - - - - -	8048	16,342,709 – 16,342,806	-	4	98	88.21	-1.52	0.79	0.617191
5033	2R_DroMel_CAF1	16,345,753 – 16,345,845	- - - - - - - - -	8049	16,345,753 – 16,345,845	+	5	92	93.36	-2.69	0.74	0.860699
5033	2R_DroMel_CAF1	16,345,753 – 16,345,845	- - - - - - - - -	8050	16,345,753 – 16,345,845	-	5	92	93.36	-2.54	0.88	0.999511
5034	2R_DroMel_CAF1	16,354,165 – 16,354,255	- - - - - - - - -	8051	16,354,165 – 16,354,255	-	5	119	72.05	-2.18	0.39	0.971050
5035	2R_DroMel_CAF1	16,361,575 – 16,361,668	- - - - - - - - -	8052	16,361,575 – 16,361,668	+	6	97	85.38	-2.26	0.72	0.508512
5036	2R_DroMel_CAF1	16,363,338 – 16,363,445	- - - - - - - - -	8053	16,363,338 – 16,363,445	+	3	118	83.90	-1.28	0.85	0.516140
5037	2R_DroMel_CAF1	16,366,257 – 16,366,356	- - - - - - - - -	8054	16,366,257 – 16,366,356	+	3	99	95.25	-1.58	1.01	0.807306
5037	2R_DroMel_CAF1	16,366,257 – 16,366,356	- - - - - - - - -	8055	16,366,257 – 16,366,356	-	3	99	95.25	-1.85	0.94	0.766067
5038	2R_DroMel_CAF1	16,377,208 – 16,377,318	- - - - - - - - -	8056	16,377,208 – 16,377,318	-	5	118	80.14	-2.15	0.43	0.644616
5039	2R_DroMel_CAF1	16,379,526 – 16,379,617	- - - - - - - - -	8057	16,379,526 – 16,379,617	+	6	97	74.77	-1.65	0.60	0.859517
5040	2R_DroMel_CAF1	16,381,196 – 16,381,304	- - - "knownCDS=Parent=FBtr0071515;Name=Ipk1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30295-RA" - - - - -	8058	16,381,196 – 16,381,304	+	6	113	77.26	-1.07	0.75	0.732789
5041	2R_DroMel_CAF1	16,385,726 – 16,385,824	- - - "knownCDS=Parent=FBtr0071515;Name=Ipk1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30295-RA" - - - - -	8059	16,385,726 – 16,385,824	+	6	116	79.00	-1.48	0.64	0.648137
5042	2R_DroMel_CAF1	16,389,100 – 16,389,201	- - - - - - - - -	8060	16,389,100 – 16,389,201	+	5	113	85.93	-2.09	0.62	0.536859
5043	2R_DroMel_CAF1	16,389,922 – 16,390,040	- - - - - - - - -	8061	16,389,922 – 16,390,040	-	6	119	75.49	-1.22	0.63	0.522411
5044	2R_DroMel_CAF1	16,394,606 – 16,394,718	- - - - - - - - -	8062	16,394,606 – 16,394,718	+	6	118	78.78	-1.68	0.70	0.871387
5045	2R_DroMel_CAF1	16,396,577 – 16,396,675	- - - - - - - - -	8063	16,396,577 – 16,396,675	+	6	105	79.50	-1.57	0.63	0.658688
5046	2R_DroMel_CAF1	16,397,485 – 16,397,586	- - - - - - - - -	8064	16,397,485 – 16,397,586	+	6	114	75.97	-1.78	0.55	0.769576
5047	2R_DroMel_CAF1	16,398,212 – 16,398,305	- - - - - - - - -	8065	16,398,212 – 16,398,305	+	6	101	77.56	-2.34	0.53	0.933509
5048	2R_DroMel_CAF1	16,400,710 – 16,400,807	- - - - - - - - -	8066	16,400,710 – 16,400,807	+	6	98	78.01	-1.66	0.58	0.662826
5049	2R_DroMel_CAF1	16,408,984 – 16,409,123	- - - - - - - - -	8067	16,408,984 – 16,409,088	-	5	112	87.33	-1.81	0.78	0.788144
5049	2R_DroMel_CAF1	16,408,984 – 16,409,123	- - - - - - - - -	8068	16,409,024 – 16,409,123	-	5	107	87.10	-2.19	0.72	0.849150
5050	2R_DroMel_CAF1	16,411,221 – 16,411,320	- - - - - - - - -	8069	16,411,221 – 16,411,320	+	6	109	74.07	-1.79	0.59	0.923669
5051	2R_DroMel_CAF1	16,414,234 – 16,414,382	- - - - - - - - -	8070	16,414,234 – 16,414,342	-	5	108	80.82	-1.84	0.62	0.661269
				8071	16,414,262 – 16,414,382	+	4	120	73.51	-2.29	0.73	0.998243
				8072	16,414,262 – 16,414,382	-	4	120	73.51	-1.73	0.73	0.954901
5052	2R_DroMel_CAF1	16,416,991 – 16,417,094	- - - - - - - - -	8073	16,416,991 – 16,417,094	+	6	112	84.59	-2.45	0.66	0.500000
5053	2R_DroMel_CAF1	16,423,101 – 16,423,316	- - - - - - - - -	8074	16,423,101 – 16,423,210	-	5	109	88.26	-1.50	0.81	0.646684
5053	2R_DroMel_CAF1	16,423,101 – 16,423,316	- - - - - - - - -	8075	16,423,210 – 16,423,316	+	5	120	74.69	-1.92	0.26	0.869180
5054	2R_DroMel_CAF1	16,426,806 – 16,426,904	- - - - - - - - -	8076	16,426,806 – 16,426,904	+	6	106	81.52	-1.89	0.75	0.815013
5054	2R_DroMel_CAF1	16,426,806 – 16,426,904	- - - - - - - - -	8077	16,426,806 – 16,426,904	-	6	106	81.52	-2.03	0.60	0.652414
5055	2R_DroMel_CAF1	16,427,743 – 16,427,838	- - - - - - - - -	8078	16,427,743 – 16,427,838	+	6	118	77.17	-1.12	0.84	0.822361
5055	2R_DroMel_CAF1	16,427,743 – 16,427,838	- - - - - - - - -	8079	16,427,743 – 16,427,838	-	6	118	77.17	-1.02	0.75	0.690384
5056	2R_DroMel_CAF1	16,430,097 – 16,430,197	- - - "knownCDS=Parent=FBtr0071518;Name=Rx-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10052-RA" - - - - -	8080	16,430,097 – 16,430,197	+	6	100	78.45	-2.13	0.53	0.816530
5057	2R_DroMel_CAF1	16,431,619 – 16,431,714	- - - - - - - - -	8081	16,431,619 – 16,431,714	+	6	106	76.43	-1.68	0.65	0.902302
5057	2R_DroMel_CAF1	16,431,619 – 16,431,714	- - - - - - - - -	8082	16,431,619 – 16,431,714	-	6	106	76.43	-1.20	0.65	0.589242
5058	2R_DroMel_CAF1	16,432,190 – 16,432,331	- - - - - - - - -	8083	16,432,190 – 16,432,291	+	5	112	79.48	-1.82	0.54	0.531089
				8084	16,432,190 – 16,432,291	-	5	112	79.48	-2.10	0.53	0.800105
				8085	16,432,227 – 16,432,331	+	6	116	77.63	-2.46	0.62	0.975859
5059	2R_DroMel_CAF1	16,435,167 – 16,435,257	- - - - - - - - -	8086	16,435,167 – 16,435,257	+	6	102	77.11	-1.15	0.65	0.506275
5060	2R_DroMel_CAF1	16,436,183 – 16,436,277	- - - - - - - - -	8087	16,436,183 – 16,436,277	-	6	110	76.12	-0.82	0.74	0.555207
5061	2R_DroMel_CAF1	16,439,937 – 16,440,046	- - - - - - - - -	8088	16,439,937 – 16,440,046	+	6	120	78.01	-2.04	0.54	0.823334
5061	2R_DroMel_CAF1	16,439,937 – 16,440,046	- - - - - - - - -	8089	16,439,937 – 16,440,046	-	6	120	78.01	-2.52	0.51	0.942596
5062	2R_DroMel_CAF1	16,440,818 – 16,440,942	- - - - - - - - -	8090	16,440,818 – 16,440,918	+	6	102	79.72	-3.60	0.79	0.969913
				8091	16,440,818 – 16,440,918	-	6	102	79.72	-1.84	0.68	0.858962
				8092	16,440,843 – 16,440,942	+	6	120	79.80	-1.95	0.76	0.911851
5063	2R_DroMel_CAF1	16,446,256 – 16,446,352	- - - - - - - - -	8093	16,446,256 – 16,446,352	+	6	114	78.19	-2.00	0.47	0.514985
5064	2R_DroMel_CAF1	16,452,532 – 16,452,691	- - - "knownCDS=Parent=FBtr0071519;Name=Act57B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10067-RA" - - - - -	8094	16,452,532 – 16,452,651	+	6	119	95.63	-0.89	0.96	0.725363
				8095	16,452,532 – 16,452,651	-	6	119	95.63	-1.34	0.92	0.887237
				8096	16,452,572 – 16,452,691	-	6	119	95.85	-1.45	0.94	0.974929
5065	2R_DroMel_CAF1	16,452,849 – 16,452,966	- - - "knownCDS=Parent=FBtr0071519;Name=Act57B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10067-RA" - - - - -	8097	16,452,849 – 16,452,966	-	6	117	94.87	-1.18	0.90	0.632678
5066	2R_DroMel_CAF1	16,453,242 – 16,453,359	- - - "knownCDS=Parent=FBtr0071519;Name=Act57B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10067-RA" - - - - -	8098	16,453,242 – 16,453,359	-	6	117	95.67	-1.14	0.89	0.500000
5067	2R_DroMel_CAF1	16,453,519 – 16,453,649	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002450; Name=snoRNA:660;Dbxref=FB:FBgn0065059,GB:NR_002549" - - - - - - - "Flybase=FBgn0065059:snoRNA:660:nuclear_small_nucleolar_RNA_gene\|6e-51"	8099	16,453,519 – 16,453,631	+	6	113	82.91	-2.14	0.70	0.719853
5067	2R_DroMel_CAF1	16,453,519 – 16,453,649		8100	16,453,556 – 16,453,649	+	6	104	78.55	-2.22	0.67	0.951932
5068	2R_DroMel_CAF1	16,459,754 – 16,459,847	- - - - - - - - -	8101	16,459,754 – 16,459,847	+	6	97	74.73	-1.67	0.60	0.867128
5068	2R_DroMel_CAF1	16,459,754 – 16,459,847	- - - - - - - - -	8102	16,459,754 – 16,459,847	-	6	97	74.73	-1.96	0.70	0.980166
5069	2R_DroMel_CAF1	16,462,572 – 16,462,772	- - - "knownCDS=Parent=FBtr0071556;Name=hbn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33152-RA" - - - - -	8103	16,462,572 – 16,462,672	-	6	115	69.54	-1.71	0.52	0.877404
5069	2R_DroMel_CAF1	16,462,572 – 16,462,772		8104	16,462,672 – 16,462,772	+	6	103	79.13	-1.30	0.66	0.582294
5070	2R_DroMel_CAF1	16,465,187 – 16,465,324	- - - - - - - - -	8105	16,465,187 – 16,465,284	+	6	101	76.00	-2.09	0.58	0.949965
				8106	16,465,187 – 16,465,284	-	6	101	76.00	-2.07	0.65	0.970744
				8107	16,465,216 – 16,465,324	+	6	108	80.80	-1.50	0.63	0.537081
5071	2R_DroMel_CAF1	16,471,092 – 16,471,201	- - - - - - - - -	8108	16,471,092 – 16,471,201	+	6	111	81.65	-1.48	0.77	0.672609
5072	2R_DroMel_CAF1	16,473,097 – 16,473,189	- - - - - - - - -	8109	16,473,097 – 16,473,189	-	6	92	91.09	-2.09	0.84	0.827293
5073	2R_DroMel_CAF1	16,473,743 – 16,473,841	- - - - - - - - -	8110	16,473,743 – 16,473,841	+	5	102	87.41	-2.12	0.65	0.548879
5073	2R_DroMel_CAF1	16,473,743 – 16,473,841	- - - - - - - - -	8111	16,473,743 – 16,473,841	-	5	102	87.41	-2.06	0.68	0.635895
5074	2R_DroMel_CAF1	16,476,672 – 16,476,766	- - - - - - - - -	8112	16,476,672 – 16,476,766	-	6	101	80.42	-1.69	0.58	0.500000
5075	2R_DroMel_CAF1	16,479,871 – 16,479,973	- - - - - - - - -	8113	16,479,871 – 16,479,973	+	3	103	55.70	-2.34	0.32	0.636948
5075	2R_DroMel_CAF1	16,479,871 – 16,479,973	- - - - - - - - -	8114	16,479,871 – 16,479,973	-	3	103	55.70	-2.79	0.38	0.991707
5076	2R_DroMel_CAF1	16,482,059 – 16,482,151	- - - - - - - - -	8115	16,482,059 – 16,482,151	+	6	117	79.52	-1.34	0.67	0.607827
5077	2R_DroMel_CAF1	16,498,967 – 16,499,077	- - - - - - - - -	8116	16,498,967 – 16,499,077	-	5	110	86.18	-1.63	0.72	0.554865
5078	2R_DroMel_CAF1	16,500,551 – 16,500,667	- - - "knownCDS=Parent=FBtr0071550;Name=CG3221-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3221-RA" - - - - -	8117	16,500,551 – 16,500,667	-	6	119	81.14	-1.40	0.76	0.667895
5079	2R_DroMel_CAF1	16,503,225 – 16,503,385	- - - "knownCDS=Parent=FBtr0071522;Name=Pros29-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9327-RA" - - - - -	8118	16,503,225 – 16,503,345	+	6	120	86.22	-2.52	0.82	0.874206
5079	2R_DroMel_CAF1	16,503,225 – 16,503,385		8119	16,503,265 – 16,503,385	+	6	120	82.09	-1.25	0.75	0.506231
5080	2R_DroMel_CAF1	16,507,297 – 16,507,400	- - - - - - - - -	8120	16,507,297 – 16,507,400	+	3	108	92.59	-2.58	0.73	0.508616
5080	2R_DroMel_CAF1	16,507,297 – 16,507,400	- - - - - - - - -	8121	16,507,297 – 16,507,400	-	3	108	92.59	-1.59	0.94	0.639939
5081	2R_DroMel_CAF1	16,508,882 – 16,508,989	- - - "knownCDS=Parent=FBtr0071524;Name=CG10543-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10543-RA" - - - - -	8122	16,508,882 – 16,508,989	+	6	116	79.45	-1.59	0.61	0.630662
5081	2R_DroMel_CAF1	16,508,882 – 16,508,989		8123	16,508,882 – 16,508,989	-	6	116	79.45	-2.31	0.55	0.860036
5082	2R_DroMel_CAF1	16,511,798 – 16,511,888	- - - - - - - - -	8124	16,511,798 – 16,511,888	+	6	91	80.15	-1.83	0.65	0.791606
5082	2R_DroMel_CAF1	16,511,798 – 16,511,888	- - - - - - - - -	8125	16,511,798 – 16,511,888	-	6	91	80.15	-1.42	0.66	0.611842
5083	2R_DroMel_CAF1	16,512,614 – 16,512,762	- - - "knownCDS=Parent=FBtr0071524, FBtr0071525;Name=CG10543-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10543-RA, FlyBase+Annotation+IDs:CG10543-RC" - - - - -	8126	16,512,614 – 16,512,725	-	6	111	89.91	-3.83	0.88	0.998779
5083	2R_DroMel_CAF1	16,512,614 – 16,512,762		8127	16,512,648 – 16,512,762	-	6	117	83.54	-3.05	0.69	0.821492
5084	2R_DroMel_CAF1	16,518,024 – 16,518,134	- - - "knownCDS=Parent=FBtr0071548;Name=grau-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33133-RA" - - - - -	8128	16,518,024 – 16,518,134	-	6	120	77.95	-2.37	0.51	0.912266
5085	2R_DroMel_CAF1	16,519,018 – 16,519,128	- - - "knownCDS=Parent=FBtr0071548;Name=grau-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33133-RA" - - - - -	8129	16,519,018 – 16,519,128	+	6	110	81.58	-1.74	0.66	0.653904
5086	2R_DroMel_CAF1	16,520,515 – 16,520,635	- - - "knownCDS=Parent=FBtr0071526;Name=CG9346-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9346-RA" - - - - -	8130	16,520,515 – 16,520,635	+	6	120	80.72	-1.51	0.66	0.616389
5087	2R_DroMel_CAF1	16,531,218 – 16,531,356	- - - "knownCDS=Parent=FBtr0071527;Name=CG30296-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30296-RD" - - - - -	8131	16,531,218 – 16,531,323	+	6	120	76.08	-2.01	0.74	0.977369
				8132	16,531,218 – 16,531,323	-	6	120	76.08	-1.73	0.58	0.824478
				8133	16,531,249 – 16,531,356	+	6	120	76.06	-1.66	0.68	0.925898
				8134	16,531,249 – 16,531,356	-	6	120	76.06	-1.74	0.53	0.651684
5088	2R_DroMel_CAF1	16,536,329 – 16,536,425	- - - - - - - - -	8135	16,536,329 – 16,536,425	+	4	105	88.38	-2.20	0.75	0.876491
5088	2R_DroMel_CAF1	16,536,329 – 16,536,425	- - - - - - - - -	8136	16,536,329 – 16,536,425	-	4	105	88.38	-1.49	0.73	0.544556
5089	2R_DroMel_CAF1	16,542,146 – 16,542,243	- - - - - - - - -	8137	16,542,146 – 16,542,243	-	3	98	95.21	-3.04	0.96	0.989319
5090	2R_DroMel_CAF1	16,545,141 – 16,545,254	- - - - - - - - -	8138	16,545,141 – 16,545,254	-	3	120	61.13	-2.34	0.42	0.939195
5091	2R_DroMel_CAF1	16,546,143 – 16,546,240	- - - - - - - - -	8139	16,546,143 – 16,546,240	-	5	101	70.46	-2.48	0.31	0.993366
5092	2R_DroMel_CAF1	16,547,072 – 16,547,174	- - - - - - - - -	8140	16,547,072 – 16,547,174	+	3	119	73.60	-2.06	0.69	0.997053
5093	2R_DroMel_CAF1	16,550,627 – 16,550,756	- - - - - - - - -	8141	16,550,627 – 16,550,728	+	6	110	83.61	-2.81	0.71	0.805730
				8142	16,550,627 – 16,550,728	-	6	110	83.61	-3.01	0.56	0.600983
				8143	16,550,663 – 16,550,756	+	5	93	91.60	-1.58	0.97	0.986315
5094	2R_DroMel_CAF1	16,555,119 – 16,555,218	- - - - - - - - -	8144	16,555,119 – 16,555,218	+	5	105	92.02	-1.55	0.84	0.844452
5094	2R_DroMel_CAF1	16,555,119 – 16,555,218	- - - - - - - - -	8145	16,555,119 – 16,555,218	-	5	105	92.02	-1.98	0.72	0.540161
5095	2R_DroMel_CAF1	16,569,866 – 16,569,986	- - - "knownCDS=Parent=FBtr0071534;Name=CG9357-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9357-RA" - - - - -	8146	16,569,866 – 16,569,986	-	6	120	75.50	-1.96	0.49	0.803412
5096	2R_DroMel_CAF1	16,571,770 – 16,571,886	- - - "knownCDS=Parent=FBtr0071544;Name=CG30293-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30293-RA" - - - - -	8147	16,571,770 – 16,571,886	-	6	118	79.99	-1.68	0.64	0.712524
5097	2R_DroMel_CAF1	16,572,193 – 16,572,297	- - - "knownCDS=Parent=FBtr0071544;Name=CG30293-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30293-RA" - - - - -	8148	16,572,193 – 16,572,297	-	6	114	79.22	-1.23	0.71	0.657439
5098	2R_DroMel_CAF1	16,588,564 – 16,588,678	- - - - - - - - -	8149	16,588,564 – 16,588,678	+	4	115	84.75	-1.68	0.66	0.598538
5098	2R_DroMel_CAF1	16,588,564 – 16,588,678	- - - - - - - - -	8150	16,588,564 – 16,588,678	-	4	115	84.75	-1.55	0.71	0.588406
5099	2R_DroMel_CAF1	16,588,979 – 16,589,084	- - - - - - - - -	8151	16,588,979 – 16,589,084	+	5	115	78.48	-2.57	0.50	0.979402
5099	2R_DroMel_CAF1	16,588,979 – 16,589,084	- - - - - - - - -	8152	16,588,979 – 16,589,084	-	5	115	78.48	-1.90	0.66	0.875191
5100	2R_DroMel_CAF1	16,591,082 – 16,591,174	- - - - - - - - -	8153	16,591,082 – 16,591,174	+	5	92	89.24	-2.34	0.76	0.939262
5100	2R_DroMel_CAF1	16,591,082 – 16,591,174	- - - - - - - - -	8154	16,591,082 – 16,591,174	-	5	92	89.24	-1.91	0.74	0.752967
5101	2R_DroMel_CAF1	16,593,373 – 16,593,493	- - - "knownCDS=Parent=FBtr0071535, FBtr0071536, FBtr0071539, FBtr0071540;Name=Treh-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9364-RE, FlyBase+Annotation+IDs:CG9364-RD, FlyBase+Annotation+IDs:CG9364-RC, FlyBase+Annotation+IDs:CG9364-RF" - - - - -	8155	16,593,373 – 16,593,493	+	6	120	80.06	-1.93	0.54	0.576873
5102	2R_DroMel_CAF1	16,595,209 – 16,595,306	- - - - - - - - -	8156	16,595,209 – 16,595,306	+	6	103	70.82	-1.89	0.56	0.956912
5102	2R_DroMel_CAF1	16,595,209 – 16,595,306	- - - - - - - - -	8157	16,595,209 – 16,595,306	-	6	103	70.82	-1.77	0.44	0.717185
5103	2R_DroMel_CAF1	16,599,870 – 16,600,011	- - - - - - - - -	8158	16,599,870 – 16,599,971	-	4	101	94.72	-2.05	0.94	0.950543
5103	2R_DroMel_CAF1	16,599,870 – 16,600,011	- - - - - - - - -	8159	16,599,891 – 16,600,011	-	4	120	94.58	-1.67	0.85	0.618450
5104	2R_DroMel_CAF1	16,602,328 – 16,602,418	- - - - - - - - -	8160	16,602,328 – 16,602,418	+	6	91	79.61	-3.25	0.44	0.946652
5105	2R_DroMel_CAF1	16,603,519 – 16,603,709	- - - - - - - - -	8161	16,603,519 – 16,603,629	-	5	112	95.35	-2.48	0.90	0.999547
				8162	16,603,557 – 16,603,669	-	5	112	95.71	-2.75	0.98	0.999974
				8163	16,603,589 – 16,603,709	-	5	120	93.82	-1.75	0.89	0.983925
5106	2R_DroMel_CAF1	16,604,889 – 16,604,999	- - - - - - - - -	8164	16,604,889 – 16,604,999	+	5	114	78.71	-2.44	0.51	0.959336
5106	2R_DroMel_CAF1	16,604,889 – 16,604,999	- - - - - - - - -	8165	16,604,889 – 16,604,999	-	5	114	78.71	-1.85	0.50	0.528263
5107	2R_DroMel_CAF1	16,613,494 – 16,613,594	- - - - - - - - -	8166	16,613,494 – 16,613,594	+	6	107	75.39	-2.53	0.36	0.898258
5107	2R_DroMel_CAF1	16,613,494 – 16,613,594	- - - - - - - - -	8167	16,613,494 – 16,613,594	-	6	107	75.39	-2.73	0.40	0.975222
5108	2R_DroMel_CAF1	16,615,919 – 16,616,011	- - - - - - - - -	8168	16,615,919 – 16,616,011	+	4	108	83.33	-1.62	0.65	0.528405
5109	2R_DroMel_CAF1	16,624,263 – 16,624,354	- - - - - - - - -	8169	16,624,263 – 16,624,354	+	6	93	70.34	-1.84	0.56	0.947176
5110	2R_DroMel_CAF1	16,630,736 – 16,630,827	- - - "knownCDS=Parent=FBtr0089600;Name=king-tubby-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9398-RB" - - - - -	8170	16,630,736 – 16,630,827	-	6	105	80.31	-1.32	0.68	0.586341
5111	2R_DroMel_CAF1	16,631,526 – 16,631,652	- - - - - - - - -	8171	16,631,526 – 16,631,627	-	5	101	95.39	-1.27	0.93	0.823360
				8172	16,631,553 – 16,631,652	+	5	99	93.05	-1.76	0.87	0.974186
				8173	16,631,553 – 16,631,652	-	5	99	93.05	-1.76	0.93	0.994017
5112	2R_DroMel_CAF1	16,636,686 – 16,636,786	- - - "knownCDS=Parent=FBtr0071569;Name=mago-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9401-RA" - - - - -	8174	16,636,686 – 16,636,786	+	6	114	77.06	-1.41	0.75	0.895009
5113	2R_DroMel_CAF1	16,637,504 – 16,637,604	- - - "knownCDS=Parent=FBtr0071636;Name=Magi-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30388-RA" - - - - -	8175	16,637,504 – 16,637,604	+	5	112	82.82	-1.58	0.71	0.539732
5114	2R_DroMel_CAF1	16,641,187 – 16,641,279	- - - - - - - - -	8176	16,641,187 – 16,641,279	-	6	95	77.17	-1.80	0.64	0.908701
5115	2R_DroMel_CAF1	16,644,667 – 16,644,771	- - - - - - - - -	8177	16,644,667 – 16,644,771	-	6	107	73.08	-2.55	0.23	0.764999
5116	2R_DroMel_CAF1	16,648,904 – 16,649,006	- - - - - - - - -	8178	16,648,904 – 16,649,006	-	5	102	97.06	-1.33	0.96	0.874654
5117	2R_DroMel_CAF1	16,649,052 – 16,649,146	- - - - - - - - -	8179	16,649,052 – 16,649,146	-	6	103	78.55	-1.54	0.73	0.865058
5118	2R_DroMel_CAF1	16,652,013 – 16,652,159	- - - "knownCDS=Parent=FBtr0071572;Name=Xbp1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9415-RA" - - - - -	8180	16,652,013 – 16,652,120	+	6	120	80.37	-2.42	0.77	0.939657
				8181	16,652,013 – 16,652,120	-	6	120	80.37	-2.01	0.55	0.624988
				8182	16,652,048 – 16,652,159	+	6	120	84.71	-4.55	0.90	0.994272
				8183	16,652,048 – 16,652,159	-	6	120	84.71	-4.06	0.89	0.992790
5119	2R_DroMel_CAF1	16,652,697 – 16,652,796	- - "RNAmicro=f:16652697_t:16652801_strand:-_p:0.681841" "knownCDS=Parent=FBtr0071571;Name=Xbp1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9415-RB" - - - - -	8184	16,652,697 – 16,652,796	+	6	105	79.06	-3.00	0.71	0.976886
5119	2R_DroMel_CAF1	16,652,697 – 16,652,796		8185	16,652,697 – 16,652,796	-	6	105	79.06	-3.02	0.65	0.979674
5120	2R_DroMel_CAF1	16,654,841 – 16,654,959	- - - "knownCDS=Parent=FBtr0071573;Name=CG9418-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9418-RA" - - - - -	8186	16,654,841 – 16,654,959	-	6	118	81.81	-2.22	0.62	0.735110
5121	2R_DroMel_CAF1	16,656,985 – 16,657,119	- - - "knownCDS=Parent=FBtr0071633;Name=CG30389-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30389-RC" - - - - -	8187	16,656,985 – 16,657,087	-	6	111	71.35	-2.30	0.52	0.988741
5121	2R_DroMel_CAF1	16,656,985 – 16,657,119		8188	16,657,025 – 16,657,119	-	6	94	77.30	-1.93	0.59	0.879208
5122	2R_DroMel_CAF1	16,657,394 – 16,657,569	- - - "knownCDS=Parent=FBtr0071633;Name=CG30389-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30389-RC" - - - - -	8189	16,657,394 – 16,657,514	-	6	120	79.42	-1.80	0.59	0.711487
				8190	16,657,434 – 16,657,543	-	6	120	75.66	-1.57	0.59	0.724687
				8191	16,657,474 – 16,657,569	-	6	108	77.52	-1.14	0.70	0.658531
5123	2R_DroMel_CAF1	16,663,156 – 16,663,326	- - - "knownCDS=Parent=FBtr0071632;Name=CG30389-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30389-RA" - - - - -	8192	16,663,156 – 16,663,247	-	6	104	75.39	-1.84	0.58	0.897603
5123	2R_DroMel_CAF1	16,663,156 – 16,663,326		8193	16,663,211 – 16,663,326	-	6	116	82.89	-2.16	0.74	0.778605
5124	2R_DroMel_CAF1	16,668,127 – 16,668,247	- - - - - - - - -	8194	16,668,127 – 16,668,247	+	4	120	83.61	-1.59	0.66	0.538567
5125	2R_DroMel_CAF1	16,668,916 – 16,669,022	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000125; Name=Dmel_Gly_GCC_14000125;TFAMID=DmelGGCC-16669008" "tRNAscan=type:Gly:anticodon:GCC f:16668937_t:16669028_strand=-_cove=82.25" - - "Rfam=AC099683.1/51353-51419_RF00005;tRNA;\|7e-26" - - "ncRNAdb=HsapiAK024805_RNA\|2e-20" "Flybase=FBgn0011859:transfer_RNA:gly3:22BCa:cytosolic_tRNA_gene\|4e-36"	8195	16,668,916 – 16,669,022	+	4	107	77.69	-1.24	0.91	0.850310
5125	2R_DroMel_CAF1	16,668,916 – 16,669,022		8196	16,668,916 – 16,669,022	-	4	107	77.69	-1.87	0.86	0.965706
5126	2R_DroMel_CAF1	16,671,756 – 16,671,867	- - - - - - - - -	8197	16,671,756 – 16,671,867	-	6	113	80.24	-1.44	0.64	0.572389
5127	2R_DroMel_CAF1	16,686,284 – 16,686,389	- - - - - - - - -	8198	16,686,284 – 16,686,389	-	4	118	79.28	-1.90	0.79	0.919796
5128	2R_DroMel_CAF1	16,691,070 – 16,691,189	- - - - - - - - -	8199	16,691,070 – 16,691,189	+	5	120	96.66	-2.08	0.95	0.998912
5128	2R_DroMel_CAF1	16,691,070 – 16,691,189	- - - - - - - - -	8200	16,691,070 – 16,691,189	-	5	120	96.66	-2.15	0.92	0.998327
5129	2R_DroMel_CAF1	16,692,064 – 16,692,278	- - - "knownCDS=Parent=FBtr0071582;Name=tud-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9450-RA" - - - - -	8201	16,692,064 – 16,692,161	+	6	99	77.95	-1.89	0.64	0.903200
				8202	16,692,064 – 16,692,161	-	6	99	77.95	-3.20	0.62	0.990779
				8203	16,692,093 – 16,692,198	-	6	110	78.25	-1.92	0.59	0.845752
				8204	16,692,161 – 16,692,278	-	6	117	76.75	-2.02	0.50	0.767599
5130	2R_DroMel_CAF1	16,693,733 – 16,693,847	- - - "knownCDS=Parent=FBtr0071582;Name=tud-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9450-RA" - - - - -	8205	16,693,733 – 16,693,847	+	6	117	76.51	-1.32	0.73	0.858657
5131	2R_DroMel_CAF1	16,699,111 – 16,699,271	- - - "knownCDS=Parent=FBtr0071582;Name=tud-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9450-RA" - - - - -	8206	16,699,111 – 16,699,231	+	6	120	78.78	-1.79	0.66	0.864339
5131	2R_DroMel_CAF1	16,699,111 – 16,699,271		8207	16,699,151 – 16,699,271	+	6	120	81.44	-2.04	0.66	0.770112
5132	2R_DroMel_CAF1	16,707,880 – 16,707,978	- - - - - - - - -	8208	16,707,880 – 16,707,978	+	4	114	70.43	-1.73	0.49	0.524535
5133	2R_DroMel_CAF1	16,710,189 – 16,710,282	- - - - - - - - -	8209	16,710,189 – 16,710,282	-	5	93	88.63	-1.61	0.89	0.896572
5134	2R_DroMel_CAF1	16,712,800 – 16,712,898	- - - "knownCDS=Parent=FBtr0089601;Name=Glycogenin-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9480-RB" - - - - -	8210	16,712,800 – 16,712,898	+	6	111	79.40	-1.26	0.68	0.597542
5134	2R_DroMel_CAF1	16,712,800 – 16,712,898		8211	16,712,800 – 16,712,898	-	6	111	79.40	-2.07	0.83	0.941960
5135	2R_DroMel_CAF1	16,713,934 – 16,714,030	- - - - - - - - -	8212	16,713,934 – 16,714,030	-	6	102	92.72	-1.08	0.92	0.654110
5136	2R_DroMel_CAF1	16,714,670 – 16,714,761	- - - "knownCDS=texon10702;Parent=CG_RGUI_GID_mRNA_40004103, CG_DGIL_SNO_28357628, CG_BATZ_CON_47004842" - - - - -	8213	16,714,670 – 16,714,761	+	5	117	83.03	-1.63	0.78	0.645926
5136	2R_DroMel_CAF1	16,714,670 – 16,714,761		8214	16,714,670 – 16,714,761	-	5	117	83.03	-2.19	0.89	0.975030
5137	2R_DroMel_CAF1	16,723,514 – 16,723,605	- - - - - - - - -	8215	16,723,514 – 16,723,605	-	6	97	74.96	-1.44	0.60	0.679752
5138	2R_DroMel_CAF1	16,724,693 – 16,724,796	- - - - - - - - -	8216	16,724,693 – 16,724,796	-	6	106	72.73	-1.84	0.56	0.927299
5139	2R_DroMel_CAF1	16,726,496 – 16,726,610	- - - "knownCDS=Parent=FBtr0071622;Name=CG18375-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18375-RA" - - - - -	8217	16,726,496 – 16,726,610	+	6	115	85.03	-1.38	0.89	0.566069
5139	2R_DroMel_CAF1	16,726,496 – 16,726,610		8218	16,726,496 – 16,726,610	-	6	115	85.03	-1.62	0.79	0.507730
5140	2R_DroMel_CAF1	16,728,857 – 16,728,968	- - - "knownCDS=Parent=FBtr0071623;Name=CG18375-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18375-RB" - - - - -	8219	16,728,857 – 16,728,968	+	6	120	74.35	-1.92	0.61	0.958820
5140	2R_DroMel_CAF1	16,728,857 – 16,728,968		8220	16,728,857 – 16,728,968	-	6	120	74.35	-1.87	0.63	0.959142
5141	2R_DroMel_CAF1	16,730,762 – 16,730,874	- - - "knownCDS=Parent=FBtr0071623;Name=CG18375-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18375-RB" - - - - -	8221	16,730,762 – 16,730,874	+	6	119	90.83	-2.08	0.86	0.920007
5142	2R_DroMel_CAF1	16,735,125 – 16,735,217	- - - - - - - - -	8222	16,735,125 – 16,735,217	+	5	92	92.28	-1.93	0.76	0.759946
5142	2R_DroMel_CAF1	16,735,125 – 16,735,217	- - - - - - - - -	8223	16,735,125 – 16,735,217	-	5	92	92.28	-1.27	0.92	0.804852
5143	2R_DroMel_CAF1	16,735,899 – 16,736,017	- - - - - - - - -	8224	16,735,899 – 16,735,990	+	6	107	78.92	-2.04	0.67	0.923082
				8225	16,735,899 – 16,735,990	-	6	107	78.92	-2.43	0.69	0.962161
				8226	16,735,917 – 16,736,017	-	6	112	75.10	-1.87	0.54	0.855385
5144	2R_DroMel_CAF1	16,738,072 – 16,738,186	- - - - - - - - -	8227	16,738,072 – 16,738,186	-	4	115	84.25	-1.43	0.73	0.510850
5145	2R_DroMel_CAF1	16,742,163 – 16,742,263	- - - - - - - - -	8228	16,742,163 – 16,742,263	+	6	100	81.12	-1.47	0.65	0.559188
5145	2R_DroMel_CAF1	16,742,163 – 16,742,263	- - - - - - - - -	8229	16,742,163 – 16,742,263	-	6	100	81.12	-2.02	0.73	0.856585
5146	2R_DroMel_CAF1	16,742,749 – 16,742,880	- - - - - - - - -	8230	16,742,749 – 16,742,853	-	5	115	81.40	-1.82	0.65	0.677418
5146	2R_DroMel_CAF1	16,742,749 – 16,742,880	- - - - - - - - -	8231	16,742,785 – 16,742,880	-	5	106	88.49	-1.70	0.74	0.611465
5147	2R_DroMel_CAF1	16,748,894 – 16,748,987	- - - - - - - - -	8232	16,748,894 – 16,748,987	+	5	99	73.26	-1.70	0.59	0.792856
5147	2R_DroMel_CAF1	16,748,894 – 16,748,987	- - - - - - - - -	8233	16,748,894 – 16,748,987	-	5	99	73.26	-1.33	0.64	0.500000
5148	2R_DroMel_CAF1	16,751,577 – 16,751,677	- - - - - - - - -	8234	16,751,577 – 16,751,677	+	5	117	77.18	-1.30	0.74	0.642162
5149	2R_DroMel_CAF1	16,754,934 – 16,755,037	- - - - - - - - -	8235	16,754,934 – 16,755,037	+	5	120	83.32	-2.13	0.70	0.870635
5150	2R_DroMel_CAF1	16,764,650 – 16,764,774	- - - - - - - - -	8236	16,764,650 – 16,764,755	-	5	110	74.34	-1.57	0.12	0.719013
				8237	16,764,679 – 16,764,774	+	3	99	70.71	-2.49	0.55	0.997862
				8238	16,764,679 – 16,764,774	-	3	99	70.71	-2.58	0.51	0.994400
5151	2R_DroMel_CAF1	16,766,420 – 16,766,521	- - - - - - - - -	8239	16,766,420 – 16,766,521	-	5	111	86.90	-2.30	0.64	0.599298
5152	2R_DroMel_CAF1	16,767,441 – 16,767,538	- - - - - - - - -	8240	16,767,441 – 16,767,538	-	6	108	83.10	-1.78	0.82	0.746247
5153	2R_DroMel_CAF1	16,774,198 – 16,774,299	- - - "knownCDS=Parent=FBtr0071620;Name=CG30393-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30393-RA" - - - - -	8241	16,774,198 – 16,774,299	+	5	120	73.46	-2.12	0.49	0.960469
5154	2R_DroMel_CAF1	16,774,499 – 16,774,619	- - - "knownCDS=Parent=FBtr0071620;Name=CG30393-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30393-RA" - - - - -	8242	16,774,499 – 16,774,619	-	5	120	91.83	-1.51	0.80	0.648348
5155	2R_DroMel_CAF1	16,777,519 – 16,777,627	- - - - - - - - -	8243	16,777,519 – 16,777,627	-	5	112	84.10	-2.42	0.88	0.990276
5156	2R_DroMel_CAF1	16,780,301 – 16,780,400	- - - - - - - - -	8244	16,780,301 – 16,780,400	+	6	109	83.21	-3.58	0.73	0.929369
5156	2R_DroMel_CAF1	16,780,301 – 16,780,400	- - - - - - - - -	8245	16,780,301 – 16,780,400	-	6	109	83.21	-2.00	0.75	0.726820
5157	2R_DroMel_CAF1	16,783,512 – 16,783,614	- - "RNAmicro=f:16783512_t:16783619_strand:-_p:0.997461" "knownCDS=Parent=FBtr0091960;Name=Rgk3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33949-RA" - - - - -	8246	16,783,512 – 16,783,614	+	6	108	87.56	-5.21	0.82	0.995586
5157	2R_DroMel_CAF1	16,783,512 – 16,783,614		8247	16,783,512 – 16,783,614	-	6	108	87.56	-4.22	0.86	0.996390
5158	2R_DroMel_CAF1	16,790,257 – 16,790,351	- - - - - - - - -	8248	16,790,257 – 16,790,351	+	6	101	83.39	-1.66	0.69	0.500000
5159	2R_DroMel_CAF1	16,792,409 – 16,792,508	- - - "knownCDS=Parent=FBtr0071590;Name=CG10069-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10069-RB" - - - - -	8249	16,792,409 – 16,792,508	+	6	110	72.94	-1.49	0.58	0.731721
5159	2R_DroMel_CAF1	16,792,409 – 16,792,508		8250	16,792,409 – 16,792,508	-	6	110	72.94	-2.00	0.55	0.956648
5160	2R_DroMel_CAF1	16,794,712 – 16,794,831	- - - "knownCDS=Parent=FBtr0071619;Name=CG10505-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10505-RA" - - - - -	8251	16,794,712 – 16,794,831	-	6	120	76.59	-2.21	0.66	0.976769
5161	2R_DroMel_CAF1	16,798,788 – 16,798,901	- - - - - - - - -	8252	16,798,788 – 16,798,901	-	3	120	76.19	-1.80	0.71	0.953137
5162	2R_DroMel_CAF1	16,800,850 – 16,800,956	- - - "knownCDS=Parent=FBtr0071617;Name=CG30390-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30390-RA" - - - - -	8253	16,800,850 – 16,800,956	+	6	111	74.30	-1.47	0.55	0.531808
5163	2R_DroMel_CAF1	16,805,555 – 16,805,649	- - - - - - - - -	8254	16,805,555 – 16,805,649	+	6	105	83.12	-1.67	0.74	0.609506
5164	2R_DroMel_CAF1	16,807,333 – 16,807,426	- - - - - - - - -	8255	16,807,333 – 16,807,426	-	6	93	97.13	-0.82	0.97	0.740396
5165	2R_DroMel_CAF1	16,809,307 – 16,809,515	- - - - - - - - -	8256	16,809,307 – 16,809,403	-	5	108	83.43	-2.19	0.55	0.560118
5165	2R_DroMel_CAF1	16,809,307 – 16,809,515	- - - - - - - - -	8257	16,809,403 – 16,809,515	+	5	112	93.24	-1.82	0.82	0.921235
5166	2R_DroMel_CAF1	16,814,872 – 16,814,966	- - - - - - - - -	8258	16,814,872 – 16,814,966	+	6	103	79.45	-2.11	0.59	0.852722
5167	2R_DroMel_CAF1	16,818,571 – 16,818,744	- - - "knownCDS=Parent=FBtr0071615;Name=CG9754-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9754-RA" - - - - -	8259	16,818,571 – 16,818,676	+	6	105	81.33	-1.56	0.66	0.604778
				8260	16,818,611 – 16,818,714	+	6	103	81.42	-1.51	0.66	0.565589
				8261	16,818,611 – 16,818,714	-	6	103	81.42	-1.67	0.64	0.596220
				8262	16,818,645 – 16,818,744	+	6	103	78.67	-1.23	0.67	0.582210
5168	2R_DroMel_CAF1	16,825,640 – 16,825,735	- - - "knownCDS=Parent=FBtr0071600, FBtr0071599;Name=CG9485-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9485-RB, FlyBase+Annotation+IDs:CG9485-RA" - - - - -	8263	16,825,640 – 16,825,735	+	6	109	78.15	-1.18	0.69	0.628779
5169	2R_DroMel_CAF1	16,827,936 – 16,828,029	- - "RNAmicro=f:16827936_t:16828028_strand:-_p:0.890653" "knownCDS=Parent=FBtr0071613, FBtr0071614;Name=CG30394-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30394-RB, FlyBase+Annotation+IDs:CG30394-RA" - - - - -	8264	16,827,936 – 16,828,029	+	6	93	84.44	-2.51	0.79	0.843920
5169	2R_DroMel_CAF1	16,827,936 – 16,828,029		8265	16,827,936 – 16,828,029	-	6	93	84.44	-2.61	0.65	0.537299
5170	2R_DroMel_CAF1	16,828,476 – 16,828,590	- - - "knownCDS=Parent=FBtr0071613, FBtr0071614;Name=CG30394-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30394-RB, FlyBase+Annotation+IDs:CG30394-RA" - - - - -	8266	16,828,476 – 16,828,590	+	5	120	70.50	-1.66	0.50	0.638141
5171	2R_DroMel_CAF1	16,831,783 – 16,831,900	- - - "knownCDS=Parent=FBtr0071603;Name=dom-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9696-RA" - - - - -	8267	16,831,783 – 16,831,900	+	6	120	84.85	-2.63	0.88	0.968333
5171	2R_DroMel_CAF1	16,831,783 – 16,831,900		8268	16,831,783 – 16,831,900	-	6	120	84.85	-1.99	0.81	0.740092
5172	2R_DroMel_CAF1	16,832,216 – 16,832,401	- - - "knownCDS=Parent=FBtr0071603;Name=dom-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9696-RA" - - - - -	8269	16,832,216 – 16,832,324	+	6	117	75.34	-1.78	0.50	0.624509
				8270	16,832,244 – 16,832,364	+	6	120	81.22	-1.86	0.63	0.677829
				8271	16,832,284 – 16,832,401	+	6	118	80.90	-1.50	0.71	0.693859
5173	2R_DroMel_CAF1	16,832,769 – 16,832,914	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002451; Name=Me28S-Am2589a;Dbxref=GB:AJ784339" - - - - - - - -	8272	16,832,769 – 16,832,875	+	6	107	80.85	-2.00	0.81	0.897097
				8273	16,832,769 – 16,832,875	-	6	107	80.85	-2.41	0.79	0.934727
				8274	16,832,797 – 16,832,914	+	6	117	81.26	-1.95	0.72	0.824733
5174	2R_DroMel_CAF1	16,837,273 – 16,837,372	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002456; Name=psi28S-3378;Dbxref=FB:FBgn0082963, GB:AJ629262" - - - - - - - -	8275	16,837,273 – 16,837,372	+	6	107	82.94	-1.78	0.89	0.846805
5175	2R_DroMel_CAF1	16,837,876 – 16,837,990	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002458; Name=psi18S-841b;Dbxref=FB:FBgn0083018, GB:AJ629259" - - - - - - - -	8276	16,837,876 – 16,837,990	+	6	114	83.80	-1.81	0.79	0.669857
5176	2R_DroMel_CAF1	16,841,577 – 16,841,810	- - - - - - - - -	8277	16,841,577 – 16,841,692	+	5	117	88.95	-1.48	0.90	0.828099
				8278	16,841,692 – 16,841,810	+	5	120	85.73	-3.62	0.84	0.999485
				8279	16,841,692 – 16,841,810	-	5	120	85.73	-3.00	0.69	0.964350
5177	2R_DroMel_CAF1	16,843,915 – 16,844,019	- - - - - - - - -	8280	16,843,915 – 16,844,019	-	5	105	77.69	-1.47	0.67	0.541091
5178	2R_DroMel_CAF1	16,846,733 – 16,846,841	- - - "knownCDS=Parent=FBtr0071603;Name=dom-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9696-RA" - - - - -	8281	16,846,733 – 16,846,841	-	6	111	81.44	-1.81	0.68	0.729055
5179	2R_DroMel_CAF1	16,847,082 – 16,847,181	- - - "knownCDS=Parent=FBtr0071603;Name=dom-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9696-RA" - - - - -	8282	16,847,082 – 16,847,181	+	6	102	78.47	-1.59	0.65	0.784650
5180	2R_DroMel_CAF1	16,848,028 – 16,848,216	- - - "knownCDS=Parent=FBtr0071603;Name=dom-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9696-RA" - - - - -	8283	16,848,028 – 16,848,148	+	6	120	81.89	-1.86	0.62	0.593999
5180	2R_DroMel_CAF1	16,848,028 – 16,848,216		8284	16,848,108 – 16,848,216	+	6	109	81.23	-1.35	0.68	0.535447
5181	2R_DroMel_CAF1	16,848,387 – 16,848,493	- - - "knownCDS=Parent=FBtr0071603;Name=dom-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9696-RA" - - - - -	8285	16,848,387 – 16,848,493	+	6	106	79.75	-3.42	0.60	0.981011
5182	2R_DroMel_CAF1	16,851,017 – 16,851,137	- - - "knownCDS=Parent=FBtr0071605;Name=CG15666-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15666-RA" - - - - -	8286	16,851,017 – 16,851,137	-	6	120	74.94	-1.45	0.57	0.555665
5183	2R_DroMel_CAF1	16,853,040 – 16,853,141	- - - - - - - - -	8287	16,853,040 – 16,853,141	+	6	103	78.86	-1.57	0.59	0.569839
5184	2R_DroMel_CAF1	16,853,860 – 16,853,962	- - - - - - - - -	8288	16,853,860 – 16,853,962	-	6	103	75.21	-1.60	0.73	0.954981
5185	2R_DroMel_CAF1	16,854,806 – 16,854,925	- - - "knownCDS=Parent=FBtr0071612;Name=CG9822-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9822-RA" - - - - -	8289	16,854,806 – 16,854,925	-	6	120	80.22	-1.47	0.63	0.549127
5186	2R_DroMel_CAF1	16,857,214 – 16,857,309	- - - - - - - - -	8290	16,857,214 – 16,857,309	+	6	96	80.21	-1.95	0.67	0.848149
5187	2R_DroMel_CAF1	16,857,879 – 16,858,011	- - - "knownCDS=Parent=FBtr0071611;Name=CG17974-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17974-RA" - - - - -	8291	16,857,879 – 16,857,990	-	6	111	83.30	-1.69	0.70	0.539923
				8292	16,857,919 – 16,858,011	+	6	111	75.94	-2.38	0.61	0.984349
				8293	16,857,919 – 16,858,011	-	6	111	75.94	-2.45	0.74	0.988012
5188	2R_DroMel_CAF1	16,861,839 – 16,861,954	- - - - - - - - -	8294	16,861,839 – 16,861,954	+	5	115	90.16	-2.83	0.75	0.973756
5188	2R_DroMel_CAF1	16,861,839 – 16,861,954	- - - - - - - - -	8295	16,861,839 – 16,861,954	-	5	115	90.16	-2.75	0.68	0.679897
5189	2R_DroMel_CAF1	16,864,983 – 16,865,091	- - - "knownCDS=Parent=FBtr0071610;Name=cv-2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15671-RA" - - - - -	8296	16,864,983 – 16,865,091	+	6	112	79.07	-2.06	0.55	0.780974
5189	2R_DroMel_CAF1	16,864,983 – 16,865,091		8297	16,864,983 – 16,865,091	-	6	112	79.07	-1.69	0.56	0.549025
5190	2R_DroMel_CAF1	16,865,575 – 16,865,679	- - - "knownCDS=Parent=FBtr0071610;Name=cv-2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15671-RA" - - - - -	8298	16,865,575 – 16,865,679	-	6	117	77.61	-1.23	0.69	0.684365
5191	2R_DroMel_CAF1	16,865,900 – 16,866,003	- - - - - - - - -	8299	16,865,900 – 16,866,003	+	6	105	90.65	-2.54	0.77	0.516902
5191	2R_DroMel_CAF1	16,865,900 – 16,866,003	- - - - - - - - -	8300	16,865,900 – 16,866,003	-	6	105	90.65	-2.11	0.80	0.525211
5192	2R_DroMel_CAF1	16,868,366 – 16,868,456	- - - - - - - - -	8301	16,868,366 – 16,868,456	+	6	115	71.27	-2.08	0.35	0.791495
5193	2R_DroMel_CAF1	16,869,719 – 16,869,809	- - - - - - - - -	8302	16,869,719 – 16,869,809	+	6	93	83.11	-2.79	0.61	0.704517
5194	2R_DroMel_CAF1	16,877,869 – 16,877,961	- - - - - - - - -	8303	16,877,869 – 16,877,961	+	4	98	74.22	-2.84	0.74	0.999860
5194	2R_DroMel_CAF1	16,877,869 – 16,877,961	- - - - - - - - -	8304	16,877,869 – 16,877,961	-	4	98	74.22	-1.64	0.76	0.927148
5195	2R_DroMel_CAF1	16,899,110 – 16,899,202	- - - "knownCDS=Parent=FBtr0071607;Name=Acox57D-d-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9709-RA" - - - - -	8305	16,899,110 – 16,899,202	+	6	99	87.42	-1.80	0.88	0.840771
5196	2R_DroMel_CAF1	16,904,004 – 16,904,110	- - - - - - - - -	8306	16,904,004 – 16,904,110	-	6	111	80.15	-2.35	0.47	0.597301
5197	2R_DroMel_CAF1	16,913,156 – 16,913,292	- - - - - - - - -	8307	16,913,156 – 16,913,263	+	5	107	91.23	-2.32	0.82	0.986605
5197	2R_DroMel_CAF1	16,913,156 – 16,913,292	- - - - - - - - -	8308	16,913,191 – 16,913,292	+	5	105	88.79	-1.83	0.75	0.747581
5198	2R_DroMel_CAF1	16,915,456 – 16,915,549	- - - - - - - - -	8309	16,915,456 – 16,915,549	+	6	94	85.42	-2.23	0.74	0.542419
5199	2R_DroMel_CAF1	16,917,173 – 16,917,271	- - - - - - - - -	8310	16,917,173 – 16,917,271	+	5	110	90.18	-1.34	0.91	0.766574
5200	2R_DroMel_CAF1	16,917,463 – 16,917,559	- - - - - - - - -	8311	16,917,463 – 16,917,559	+	6	116	79.25	-1.14	0.77	0.661609
5201	2R_DroMel_CAF1	16,920,584 – 16,920,678	- - - - - - - - -	8312	16,920,584 – 16,920,678	+	6	98	77.68	-2.82	0.56	0.985293
5201	2R_DroMel_CAF1	16,920,584 – 16,920,678	- - - - - - - - -	8313	16,920,584 – 16,920,678	-	6	98	77.68	-2.65	0.51	0.967694
5202	2R_DroMel_CAF1	16,921,390 – 16,921,480	- - - - - - - - -	8314	16,921,390 – 16,921,480	+	6	93	80.79	-1.92	0.65	0.779108
5203	2R_DroMel_CAF1	16,924,560 – 16,924,656	- - - - - - - - -	8315	16,924,560 – 16,924,656	+	6	101	91.60	-2.37	0.83	0.861710
5203	2R_DroMel_CAF1	16,924,560 – 16,924,656	- - - - - - - - -	8316	16,924,560 – 16,924,656	-	6	101	91.60	-1.86	0.91	0.972678
5204	2R_DroMel_CAF1	16,927,893 – 16,927,986	- - - - - - - - -	8317	16,927,893 – 16,927,986	+	6	120	74.19	-2.12	0.42	0.841505
5205	2R_DroMel_CAF1	16,932,071 – 16,932,166	- - - - - - - - -	8318	16,932,071 – 16,932,166	-	6	99	93.64	-1.84	0.92	0.990227
5206	2R_DroMel_CAF1	16,933,809 – 16,933,904	- - - - - - - - -	8319	16,933,809 – 16,933,904	-	5	108	82.86	-1.96	0.61	0.626259
5207	2R_DroMel_CAF1	16,935,571 – 16,935,664	- - - - - - - - -	8320	16,935,571 – 16,935,664	-	6	114	89.00	-0.93	0.97	0.500000
5208	2R_DroMel_CAF1	16,946,519 – 16,946,616	- - - - - - - - -	8321	16,946,519 – 16,946,616	+	5	98	95.38	-1.60	0.86	0.889963
5209	2R_DroMel_CAF1	16,958,614 – 16,958,711	- - - - - - - - -	8322	16,958,614 – 16,958,711	+	6	115	76.97	-2.42	0.45	0.897435
5209	2R_DroMel_CAF1	16,958,614 – 16,958,711	- - - - - - - - -	8323	16,958,614 – 16,958,711	-	6	115	76.97	-2.07	0.51	0.835409
5210	2R_DroMel_CAF1	16,960,893 – 16,960,991	- - - - - - - - -	8324	16,960,893 – 16,960,991	+	6	113	81.31	-2.21	0.72	0.872844
5211	2R_DroMel_CAF1	16,962,263 – 16,962,382	- - - - - - - - -	8325	16,962,263 – 16,962,354	+	4	93	82.23	-2.02	0.68	0.850772
5211	2R_DroMel_CAF1	16,962,263 – 16,962,382	- - - - - - - - -	8326	16,962,285 – 16,962,382	+	4	108	72.23	-2.89	0.60	0.999822
5212	2R_DroMel_CAF1	16,963,124 – 16,963,235	- - - - - - - - -	8327	16,963,124 – 16,963,235	-	5	116	75.58	-1.91	0.67	0.948157
5213	2R_DroMel_CAF1	16,963,358 – 16,963,449	- - - - - - - - -	8328	16,963,358 – 16,963,449	-	4	105	83.91	-2.25	0.67	0.890755
5214	2R_DroMel_CAF1	16,964,989 – 16,965,096	- - - - - - - - -	8329	16,964,989 – 16,965,096	-	6	111	78.54	-1.73	0.65	0.848016
5215	2R_DroMel_CAF1	16,971,649 – 16,971,744	- - - - - - - - -	8330	16,971,649 – 16,971,744	+	4	96	90.23	-2.83	0.70	0.795903
5216	2R_DroMel_CAF1	16,973,578 – 16,973,669	- - - - - - - - -	8331	16,973,578 – 16,973,669	-	5	102	86.29	-1.92	0.76	0.806088
5217	2R_DroMel_CAF1	16,977,488 – 16,977,595	- - - - - - - - -	8332	16,977,488 – 16,977,595	+	6	119	71.82	-2.14	0.44	0.938985
5218	2R_DroMel_CAF1	16,978,417 – 16,978,592	- - - - - - - - -	8333	16,978,417 – 16,978,518	+	5	101	95.64	-1.98	0.86	0.977428
				8334	16,978,417 – 16,978,518	-	5	101	95.64	-1.81	0.93	0.993628
				8335	16,978,484 – 16,978,592	+	6	112	81.18	-1.75	0.59	0.517087
5219	2R_DroMel_CAF1	16,979,094 – 16,979,194	- - - - - - - - -	8336	16,979,094 – 16,979,194	+	4	100	88.32	-2.06	0.65	0.563195
5220	2R_DroMel_CAF1	16,982,472 – 16,982,599	- - - - - - - - -	8337	16,982,472 – 16,982,567	-	5	111	81.43	-2.69	0.45	0.895124
5220	2R_DroMel_CAF1	16,982,472 – 16,982,599	- - - - - - - - -	8338	16,982,509 – 16,982,599	+	5	106	81.90	-1.53	0.73	0.555770
5221	2R_DroMel_CAF1	16,986,138 – 16,986,241	- - - - - - - - -	8339	16,986,138 – 16,986,241	-	5	103	80.68	-2.24	0.28	0.625064
5222	2R_DroMel_CAF1	16,990,230 – 16,990,330	- - - "knownCDS=Parent=FBtr0071641, FBtr0071642;Name=Sara-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15667-RA, FlyBase+Annotation+IDs:CG15667-RB" - - - - -	8340	16,990,230 – 16,990,330	-	6	100	85.20	-1.57	0.83	0.546511
5223	2R_DroMel_CAF1	16,995,362 – 16,995,461	- - - - - - - - -	8341	16,995,362 – 16,995,461	+	6	105	78.39	-1.57	0.57	0.500000
5224	2R_DroMel_CAF1	17,001,099 – 17,001,190	- - - - - - - - -	8342	17,001,099 – 17,001,190	+	5	98	69.97	-2.09	0.31	0.930131
5224	2R_DroMel_CAF1	17,001,099 – 17,001,190	- - - - - - - - -	8343	17,001,099 – 17,001,190	-	5	98	69.97	-2.42	0.28	0.987801
5225	2R_DroMel_CAF1	17,009,569 – 17,009,728	- - - - - - - - -	8344	17,009,569 – 17,009,688	+	5	120	84.73	-2.97	0.73	0.988154
				8345	17,009,569 – 17,009,688	-	5	120	84.73	-3.19	0.66	0.976202
				8346	17,009,609 – 17,009,728	+	5	120	89.39	-2.16	0.73	0.819234
				8347	17,009,609 – 17,009,728	-	5	120	89.39	-2.49	0.81	0.990784
5226	2R_DroMel_CAF1	17,019,546 – 17,019,756	- - - "knownCDS=Parent=FBtr0089709;Name=MESK2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15669-RA" - - - - -	8348	17,019,546 – 17,019,650	+	5	105	76.02	-2.41	0.64	0.993023
				8349	17,019,546 – 17,019,650	-	5	105	76.02	-2.19	0.51	0.950666
				8350	17,019,650 – 17,019,756	+	6	106	77.83	-1.43	0.89	0.890379
5227	2R_DroMel_CAF1	17,029,879 – 17,029,989	- - - - - - - - -	8351	17,029,879 – 17,029,989	+	4	120	79.67	-1.96	0.61	0.748361
5228	2R_DroMel_CAF1	17,035,413 – 17,035,505	- - - - - - - - -	8352	17,035,413 – 17,035,505	-	3	104	75.67	-1.32	0.70	0.608926
5229	2R_DroMel_CAF1	17,036,996 – 17,037,097	- - - - - - - - -	8353	17,036,996 – 17,037,097	+	3	120	70.76	-2.78	0.53	0.998894
5230	2R_DroMel_CAF1	17,038,805 – 17,038,906	- - - - - - - - -	8354	17,038,805 – 17,038,906	-	4	120	77.93	-2.55	0.55	0.962875
5231	2R_DroMel_CAF1	17,039,578 – 17,039,691	- - - - - - - - -	8355	17,039,578 – 17,039,691	-	3	118	81.23	-2.36	0.63	0.877942
5232	2R_DroMel_CAF1	17,040,611 – 17,040,711	- - - - - - - - -	8356	17,040,611 – 17,040,711	+	4	100	92.50	-1.47	0.86	0.580672
5232	2R_DroMel_CAF1	17,040,611 – 17,040,711	- - - - - - - - -	8357	17,040,611 – 17,040,711	-	4	100	92.50	-2.39	0.86	0.961859
5233	2R_DroMel_CAF1	17,042,604 – 17,042,749	- - - - - - - - -	8358	17,042,604 – 17,042,709	+	6	120	76.50	-2.20	0.42	0.726002
				8359	17,042,604 – 17,042,709	-	6	120	76.50	-1.59	0.58	0.684046
				8360	17,042,634 – 17,042,749	-	5	118	92.23	-1.80	0.75	0.592212
5234	2R_DroMel_CAF1	17,043,773 – 17,043,892	- - - - - - - - -	8361	17,043,773 – 17,043,892	-	5	120	76.62	-1.76	0.60	0.745349
5235	2R_DroMel_CAF1	17,044,332 – 17,044,443	- - - - - - - - -	8362	17,044,332 – 17,044,443	+	5	120	74.74	-1.99	0.42	0.857163
5236	2R_DroMel_CAF1	17,045,305 – 17,045,459	- - - - - - - - -	8363	17,045,305 – 17,045,419	+	5	120	77.64	-2.05	0.67	0.950851
5236	2R_DroMel_CAF1	17,045,305 – 17,045,459	- - - - - - - - -	8364	17,045,339 – 17,045,459	+	5	120	84.20	-2.62	0.75	0.978817
5237	2R_DroMel_CAF1	17,045,987 – 17,046,104	- - - "knownCDS=Parent=FBtr0071694;Name=CG33226-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33226-RA" - - - - -	8365	17,045,987 – 17,046,104	-	5	117	86.84	-2.02	0.71	0.733994
5238	2R_DroMel_CAF1	17,047,196 – 17,047,356	- - - "knownCDS=Parent=FBtr0071693;Name=CG30283-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30283-RA" - - - - -	8366	17,047,196 – 17,047,316	+	5	120	90.75	-1.53	0.80	0.695709
				8367	17,047,196 – 17,047,316	-	5	120	90.75	-1.42	0.80	0.584851
				8368	17,047,236 – 17,047,356	-	5	120	89.58	-2.98	0.74	0.967486
5239	2R_DroMel_CAF1	17,048,104 – 17,048,254	- - - - - - - - -	8369	17,048,104 – 17,048,215	-	5	120	78.15	-2.04	0.66	0.936813
5239	2R_DroMel_CAF1	17,048,104 – 17,048,254	- - - - - - - - -	8370	17,048,144 – 17,048,254	-	5	120	74.46	-2.43	0.50	0.992323
5240	2R_DroMel_CAF1	17,055,061 – 17,055,155	- - - - - - - - -	8371	17,055,061 – 17,055,155	+	6	108	81.92	-2.35	0.58	0.681702
5241	2R_DroMel_CAF1	17,058,943 – 17,059,036	- - - - - - - - -	8372	17,058,943 – 17,059,036	-	5	93	94.71	-2.10	0.86	0.990616
5242	2R_DroMel_CAF1	17,059,375 – 17,059,475	- - - - - - - - -	8373	17,059,375 – 17,059,475	+	5	101	96.02	-2.54	0.97	0.999926
5243	2R_DroMel_CAF1	17,069,910 – 17,070,031	- - - - - - - - -	8374	17,069,910 – 17,070,003	-	5	101	81.17	-1.82	0.64	0.661863
5243	2R_DroMel_CAF1	17,069,910 – 17,070,031	- - - - - - - - -	8375	17,069,933 – 17,070,031	+	4	107	75.04	-2.04	0.56	0.852183
5244	2R_DroMel_CAF1	17,072,805 – 17,072,896	- - - - - - - - -	8376	17,072,805 – 17,072,896	+	6	115	85.90	-2.35	0.74	0.563107
5245	2R_DroMel_CAF1	17,073,638 – 17,073,729	- - - - - - - - -	8377	17,073,638 – 17,073,729	+	5	94	89.31	-1.81	0.89	0.971381
5245	2R_DroMel_CAF1	17,073,638 – 17,073,729	- - - - - - - - -	8378	17,073,638 – 17,073,729	-	5	94	89.31	-1.93	0.72	0.648058
5246	2R_DroMel_CAF1	17,075,629 – 17,075,728	- - - - - - - - -	8379	17,075,629 – 17,075,728	+	6	100	94.33	-1.80	0.93	0.991804
5247	2R_DroMel_CAF1	17,078,301 – 17,078,429	- - - - - - - - -	8380	17,078,301 – 17,078,394	-	6	108	78.79	-1.62	0.65	0.779821
				8381	17,078,328 – 17,078,429	+	6	109	82.21	-1.60	0.78	0.693304
				8382	17,078,328 – 17,078,429	-	6	109	82.21	-1.39	0.82	0.605740
5248	2R_DroMel_CAF1	17,082,619 – 17,082,722	- - - - - - - - -	8383	17,082,619 – 17,082,722	-	6	109	83.66	-2.15	0.81	0.833702
5249	2R_DroMel_CAF1	17,084,355 – 17,084,462	- - - - - - - - -	8384	17,084,355 – 17,084,449	-	6	94	87.36	-2.32	0.76	0.509088
				8385	17,084,371 – 17,084,462	+	6	120	75.29	-2.07	0.56	0.946024
				8386	17,084,371 – 17,084,462	-	6	120	75.29	-1.87	0.57	0.895765
5250	2R_DroMel_CAF1	17,088,933 – 17,089,024	- - - - - - - - -	8387	17,088,933 – 17,089,024	+	5	92	82.01	-2.21	0.60	0.816379
5251	2R_DroMel_CAF1	17,089,828 – 17,089,919	- - - - - - - - -	8388	17,089,828 – 17,089,919	+	6	100	79.53	-2.27	0.74	0.944500
5252	2R_DroMel_CAF1	17,090,164 – 17,090,258	- - - - - - - - -	8389	17,090,164 – 17,090,258	-	6	95	91.02	-3.07	0.77	0.716891
5253	2R_DroMel_CAF1	17,095,286 – 17,095,384	- - - - - - - - -	8390	17,095,286 – 17,095,384	-	5	98	84.65	-2.95	0.75	0.991139
5254	2R_DroMel_CAF1	17,096,323 – 17,096,454	- - - - - - - - -	8391	17,096,323 – 17,096,419	+	6	119	70.12	-3.06	0.41	0.998626
				8392	17,096,323 – 17,096,419	-	6	119	70.12	-3.24	0.53	0.998835
				8393	17,096,363 – 17,096,454	+	5	120	64.60	-4.15	0.33	0.997019
				8394	17,096,363 – 17,096,454	-	5	120	64.60	-4.07	0.29	0.994754
5255	2R_DroMel_CAF1	17,101,016 – 17,101,126	- - - - - - - - -	8395	17,101,016 – 17,101,126	+	5	115	77.18	-1.89	0.71	0.940939
5256	2R_DroMel_CAF1	17,102,950 – 17,103,041	- - - - - - - - -	8396	17,102,950 – 17,103,041	-	5	104	70.60	-1.78	0.37	0.662369
5257	2R_DroMel_CAF1	17,114,256 – 17,114,348	- - - "knownCDS=Parent=FBtr0071690, FBtr0071691;Name=CG10433-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10433-RA, FlyBase+Annotation+IDs:CG10433-RB" - - - - -	8397	17,114,256 – 17,114,348	+	6	97	85.20	-1.71	0.79	0.529798
5258	2R_DroMel_CAF1	17,118,115 – 17,118,215	- - - - - - - - -	8398	17,118,115 – 17,118,215	+	6	116	80.06	-2.55	0.66	0.938727
5259	2R_DroMel_CAF1	17,121,444 – 17,121,535	- - - - - - - - -	8399	17,121,444 – 17,121,535	+	6	116	75.56	-1.38	0.72	0.902984
5260	2R_DroMel_CAF1	17,125,663 – 17,125,783	- - - "knownCDS=Parent=FBtr0071687;Name=clt-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9858-RA" - - - - -	8400	17,125,663 – 17,125,783	-	5	120	92.17	-1.45	0.80	0.589510
5261	2R_DroMel_CAF1	17,127,042 – 17,127,201	- - "RNAmicro=f:17127042_t:17127161_strand:+_p:0.556526" - - - - - -	8401	17,127,042 – 17,127,161	+	5	120	90.89	-1.29	0.84	0.565993
				8402	17,127,042 – 17,127,161	-	5	120	90.89	-2.10	0.86	0.990630
				8403	17,127,082 – 17,127,201	-	5	120	89.22	-1.42	0.86	0.712581
5262	2R_DroMel_CAF1	17,127,625 – 17,127,825	- - - "knownCDS=Parent=FBtr0071686;Name=PTP-ER-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9856-RA" - - - - -	8404	17,127,625 – 17,127,745	-	5	120	96.00	-1.26	0.93	0.787652
				8405	17,127,705 – 17,127,825	+	5	120	92.50	-1.64	0.81	0.813521
				8406	17,127,705 – 17,127,825	-	5	120	92.50	-1.42	0.90	0.890147
5263	2R_DroMel_CAF1	17,128,225 – 17,128,345	- - - "knownCDS=Parent=FBtr0071686;Name=PTP-ER-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9856-RA" - - - - -	8407	17,128,225 – 17,128,345	+	5	120	96.08	-1.10	0.97	0.646367
5263	2R_DroMel_CAF1	17,128,225 – 17,128,345		8408	17,128,225 – 17,128,345	-	5	120	96.08	-1.17	0.93	0.663808
5264	2R_DroMel_CAF1	17,128,425 – 17,128,532	- - - "knownCDS=Parent=FBtr0071686;Name=PTP-ER-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9856-RA" - - - - -	8409	17,128,425 – 17,128,532	+	5	107	97.76	-2.92	0.98	0.999930
5264	2R_DroMel_CAF1	17,128,425 – 17,128,532		8410	17,128,425 – 17,128,532	-	5	107	97.76	-1.49	0.98	0.957112
5265	2R_DroMel_CAF1	17,128,652 – 17,128,852	- - - "knownCDS=Parent=FBtr0071686;Name=PTP-ER-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9856-RA" - - - - -	8411	17,128,652 – 17,128,772	-	5	120	95.50	-1.98	0.88	0.991123
				8412	17,128,692 – 17,128,812	-	5	120	93.75	-1.63	0.78	0.600137
				8413	17,128,732 – 17,128,852	-	5	120	94.25	-1.67	0.87	0.955671
5266	2R_DroMel_CAF1	17,128,931 – 17,129,091	- - - "knownCDS=Parent=FBtr0071686;Name=PTP-ER-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9856-RA" - - - - -	8414	17,128,931 – 17,129,051	-	5	120	94.25	-1.60	0.89	0.953583
5266	2R_DroMel_CAF1	17,128,931 – 17,129,091		8415	17,128,971 – 17,129,091	-	5	120	94.25	-2.09	0.89	0.996902
5267	2R_DroMel_CAF1	17,130,006 – 17,130,166	- - - "knownCDS=Parent=FBtr0071686;Name=PTP-ER-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9856-RA" - - - - -	8416	17,130,006 – 17,130,126	-	5	120	94.00	-1.69	0.80	0.773331
5267	2R_DroMel_CAF1	17,130,006 – 17,130,166		8417	17,130,046 – 17,130,166	-	5	120	95.67	-1.65	0.93	0.984427
5268	2R_DroMel_CAF1	17,130,206 – 17,130,526	- - - "knownCDS=Parent=FBtr0071686;Name=PTP-ER-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9856-RA" - - - - -	8418	17,130,206 – 17,130,326	-	5	120	95.67	-1.41	0.89	0.852199
				8419	17,130,326 – 17,130,446	+	5	120	98.33	-1.20	0.94	0.553295
				8420	17,130,326 – 17,130,446	-	5	120	98.33	-1.23	0.95	0.624514
				8421	17,130,406 – 17,130,526	+	5	120	95.50	-1.45	0.86	0.777945
				8422	17,130,406 – 17,130,526	-	5	120	95.50	-2.32	0.97	0.999853
5269	2R_DroMel_CAF1	17,130,646 – 17,130,766	- - - "knownCDS=Parent=FBtr0071686;Name=PTP-ER-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9856-RA" - - - - -	8423	17,130,646 – 17,130,766	+	5	120	91.71	-1.27	0.84	0.541749
5270	2R_DroMel_CAF1	17,131,206 – 17,131,366	- - - "knownCDS=Parent=FBtr0071686;Name=PTP-ER-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9856-RA" - - - - -	8424	17,131,206 – 17,131,326	+	5	120	95.83	-1.56	0.88	0.909094
				8425	17,131,206 – 17,131,326	-	5	120	95.83	-1.21	0.92	0.712566
				8426	17,131,246 – 17,131,366	-	5	120	93.92	-1.90	0.90	0.994468
5271	2R_DroMel_CAF1	17,132,001 – 17,132,159	- - - - - - - - -	8427	17,132,001 – 17,132,121	-	4	120	84.86	-2.51	0.83	0.982418
5271	2R_DroMel_CAF1	17,132,001 – 17,132,159	- - - - - - - - -	8428	17,132,041 – 17,132,159	-	4	120	77.59	-2.39	0.63	0.982948
5272	2R_DroMel_CAF1	17,134,025 – 17,134,145	- - - "knownCDS=Parent=FBtr0071658;Name=CG10080-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10080-RA" - - - - -	8429	17,134,025 – 17,134,145	-	6	120	80.06	-1.76	0.62	0.704525
5273	2R_DroMel_CAF1	17,134,265 – 17,134,374	- - - - - - - - -	8430	17,134,265 – 17,134,374	+	6	113	78.33	-1.10	0.69	0.557269
5274	2R_DroMel_CAF1	17,144,643 – 17,144,743	- - "RNAmicro=f:17144643_t:17144746_strand:+_p:0.999666" "knownCDS=Parent=FBtr0071660;Name=CG10321-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10321-RA" - - - - -	8431	17,144,643 – 17,144,743	-	6	104	85.39	-2.76	0.85	0.955392
5275	2R_DroMel_CAF1	17,147,592 – 17,147,692	- - - - - - - - -	8432	17,147,592 – 17,147,692	+	3	100	77.94	-1.43	0.71	0.616653
5276	2R_DroMel_CAF1	17,153,067 – 17,153,280	- - - - - - - - -	8433	17,153,067 – 17,153,174	+	6	116	79.39	-2.43	0.56	0.905022
				8434	17,153,174 – 17,153,280	+	6	120	74.26	-2.05	0.60	0.971608
				8435	17,153,174 – 17,153,280	-	6	120	74.26	-2.58	0.46	0.987024
5277	2R_DroMel_CAF1	17,154,980 – 17,155,077	- - - - - - - - -	8436	17,154,980 – 17,155,077	-	6	107	79.39	-1.34	0.67	0.629586
5278	2R_DroMel_CAF1	17,155,156 – 17,155,257	- - - - - - - - -	8437	17,155,156 – 17,155,257	+	5	101	90.69	-1.70	0.83	0.898693
5278	2R_DroMel_CAF1	17,155,156 – 17,155,257	- - - - - - - - -	8438	17,155,156 – 17,155,257	-	5	101	90.69	-2.52	0.83	0.996358
5279	2R_DroMel_CAF1	17,158,529 – 17,158,647	- - - "knownCDS=Parent=FBtr0071684;Name=CG30284-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30284-RA" - - - - -	8439	17,158,529 – 17,158,647	-	6	118	80.51	-1.30	0.67	0.531372
5280	2R_DroMel_CAF1	17,158,687 – 17,158,807	- - - "knownCDS=Parent=FBtr0071684;Name=CG30284-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30284-RA" - - - - -	8440	17,158,687 – 17,158,807	+	6	120	86.28	-1.54	0.84	0.513548
5281	2R_DroMel_CAF1	17,158,841 – 17,158,954	- - - "knownCDS=Parent=FBtr0071684;Name=CG30284-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30284-RA" - - - - -	8441	17,158,841 – 17,158,954	-	6	116	83.86	-2.51	0.73	0.765729
5282	2R_DroMel_CAF1	17,161,991 – 17,162,103	- - - - - - - - -	8442	17,161,991 – 17,162,103	+	5	112	77.30	-1.75	0.61	0.714104
5283	2R_DroMel_CAF1	17,163,014 – 17,163,127	- - - - - - - - -	8443	17,163,014 – 17,163,127	+	6	113	81.20	-1.81	0.76	0.824169
5283	2R_DroMel_CAF1	17,163,014 – 17,163,127	- - - - - - - - -	8444	17,163,014 – 17,163,127	-	6	113	81.20	-2.23	0.73	0.885469
5284	2R_DroMel_CAF1	17,168,528 – 17,168,626	- - - - - - - - -	8445	17,168,528 – 17,168,626	-	6	105	81.53	-1.57	0.65	0.568409
5285	2R_DroMel_CAF1	17,169,963 – 17,170,078	- - - - - - - - -	8446	17,169,963 – 17,170,078	+	6	120	75.28	-2.56	0.59	0.991375
5285	2R_DroMel_CAF1	17,169,963 – 17,170,078	- - - - - - - - -	8447	17,169,963 – 17,170,078	-	6	120	75.28	-2.06	0.39	0.561095
5286	2R_DroMel_CAF1	17,173,510 – 17,173,628	- - - - - - - - -	8448	17,173,510 – 17,173,628	-	3	118	82.80	-1.59	0.88	0.848351
5287	2R_DroMel_CAF1	17,174,269 – 17,174,370	- - - - - - - - -	8449	17,174,269 – 17,174,370	+	6	105	77.33	-1.84	0.58	0.824723
5288	2R_DroMel_CAF1	17,177,887 – 17,178,037	- - - - - - - - -	8450	17,177,887 – 17,177,983	+	6	99	81.10	-2.26	0.56	0.707165
				8451	17,177,887 – 17,177,983	-	6	99	81.10	-2.75	0.44	0.594833
				8452	17,177,909 – 17,178,010	+	6	106	83.54	-2.56	0.64	0.631609
				8453	17,177,943 – 17,178,037	+	6	107	74.57	-2.62	0.48	0.988983
				8454	17,177,943 – 17,178,037	-	6	107	74.57	-1.95	0.46	0.736108
5289	2R_DroMel_CAF1	17,179,290 – 17,179,424	- - - "knownCDS=Parent=FBtr0071668;Name=CG15676-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15676-RA" - - - - -	8455	17,179,290 – 17,179,384	+	5	97	78.15	-1.77	0.66	0.805488
				8456	17,179,290 – 17,179,384	-	5	97	78.15	-2.17	0.58	0.933887
				8457	17,179,307 – 17,179,424	+	5	120	78.09	-2.08	0.68	0.952473
				8458	17,179,307 – 17,179,424	-	5	120	78.09	-1.75	0.68	0.823052
5290	2R_DroMel_CAF1	17,180,007 – 17,180,104	- - - - - - - - -	8459	17,180,007 – 17,180,104	-	6	102	81.82	-1.65	0.63	0.528328
5291	2R_DroMel_CAF1	17,180,544 – 17,180,634	- - - - - - - - -	8460	17,180,544 – 17,180,634	-	5	100	80.94	-2.11	0.61	0.839233
5292	2R_DroMel_CAF1	17,181,216 – 17,181,378	- - - - - - - - -	8461	17,181,216 – 17,181,310	+	6	110	79.15	-1.43	0.64	0.612876
5292	2R_DroMel_CAF1	17,181,216 – 17,181,378	- - - - - - - - -	8462	17,181,273 – 17,181,378	-	6	110	80.93	-1.87	0.82	0.876004
5293	2R_DroMel_CAF1	17,182,029 – 17,182,131	- - - - - - - - -	8463	17,182,029 – 17,182,131	+	5	113	89.22	-1.44	0.78	0.537231
5294	2R_DroMel_CAF1	17,184,172 – 17,184,267	- - - "knownCDS=Parent=FBtr0071669;Name=CG30263-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30263-RA" - - - - -	8464	17,184,172 – 17,184,267	-	4	116	81.52	-2.12	0.59	0.736559
5295	2R_DroMel_CAF1	17,187,620 – 17,187,712	- - - "knownCDS=Parent=FBtr0071669;Name=CG30263-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30263-RA" - - - - -	8465	17,187,620 – 17,187,712	+	5	92	90.33	-2.50	0.83	0.995804
5296	2R_DroMel_CAF1	17,196,481 – 17,196,577	- - - - - - - - -	8466	17,196,481 – 17,196,577	+	5	96	85.76	-1.76	0.69	0.584773
5297	2R_DroMel_CAF1	17,198,737 – 17,198,856	- - - - - - - - -	8467	17,198,737 – 17,198,856	+	3	120	87.19	-1.46	0.87	0.506901
5297	2R_DroMel_CAF1	17,198,737 – 17,198,856	- - - - - - - - -	8468	17,198,737 – 17,198,856	-	3	120	87.19	-1.91	0.74	0.507662
5298	2R_DroMel_CAF1	17,199,591 – 17,199,688	- - - "knownCDS=Parent=FBtr0071672;Name=CG30290-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30290-RA" - - - - -	8469	17,199,591 – 17,199,688	-	6	103	75.22	-2.02	0.62	0.964851
5299	2R_DroMel_CAF1	17,200,942 – 17,201,062	- - - "knownCDS=Parent=FBtr0071675;Name=CG17922-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17922-RA" - - - - -	8470	17,200,942 – 17,201,062	-	6	120	81.83	-1.85	0.61	0.550258
5300	2R_DroMel_CAF1	17,206,772 – 17,206,866	- - - - - - - - -	8471	17,206,772 – 17,206,866	-	6	98	87.49	-2.76	0.78	0.757660
5301	2R_DroMel_CAF1	17,209,026 – 17,209,122	- - - - - - - - -	8472	17,209,026 – 17,209,122	+	6	99	91.72	-2.30	0.87	0.976011
5302	2R_DroMel_CAF1	17,209,662 – 17,209,777	- - - - - - - - -	8473	17,209,662 – 17,209,777	-	4	115	91.45	-1.83	0.75	0.603377
5303	2R_DroMel_CAF1	17,215,389 – 17,215,479	- - - - - - - - -	8474	17,215,389 – 17,215,479	+	5	95	87.18	-2.10	0.84	0.965059
5304	2R_DroMel_CAF1	17,220,733 – 17,220,843	- - - - - - - - -	8475	17,220,733 – 17,220,843	+	6	112	82.11	-3.53	0.46	0.837716
5305	2R_DroMel_CAF1	17,222,284 – 17,222,374	- - - - - - - - -	8476	17,222,284 – 17,222,374	+	5	97	94.33	-1.92	0.91	0.996446
5305	2R_DroMel_CAF1	17,222,284 – 17,222,374	- - - - - - - - -	8477	17,222,284 – 17,222,374	-	5	97	94.33	-1.36	1.02	0.973399
5306	2R_DroMel_CAF1	17,222,827 – 17,222,944	- - - - - - - - -	8478	17,222,827 – 17,222,944	-	3	119	70.45	-2.41	0.51	0.987054
5307	2R_DroMel_CAF1	17,223,834 – 17,223,938	- - - - - - - - -	8479	17,223,834 – 17,223,938	+	5	111	78.50	-3.18	0.34	0.997094
5307	2R_DroMel_CAF1	17,223,834 – 17,223,938	- - - - - - - - -	8480	17,223,834 – 17,223,938	-	5	111	78.50	-1.90	0.53	0.647062
5308	2R_DroMel_CAF1	17,225,180 – 17,225,276	- - - "knownCDS=Parent=FBtr0071746, FBtr0071747;Name=CG30404-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30404-RA, FlyBase+Annotation+IDs:CG30404-RB" - - - - -	8481	17,225,180 – 17,225,276	-	6	114	79.61	-2.57	0.45	0.762881
5309	2R_DroMel_CAF1	17,225,719 – 17,225,839	- - - "knownCDS=Parent=FBtr0071710;Name=CG30398-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30398-RA" - - - - -	8482	17,225,719 – 17,225,839	+	6	120	75.17	-1.74	0.51	0.655843
5310	2R_DroMel_CAF1	17,228,613 – 17,228,711	- - - "knownCDS=Parent=FBtr0071711, FBtr0071712;Name=LBR-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17952-RB, FlyBase+Annotation+IDs:CG17952-RA" - - - - -	8483	17,228,613 – 17,228,711	-	6	98	73.19	-1.56	0.68	0.942051
5311	2R_DroMel_CAF1	17,229,089 – 17,229,237	- - - - - - - - -	8484	17,229,089 – 17,229,197	+	5	114	77.33	-2.41	0.83	0.994530
5311	2R_DroMel_CAF1	17,229,089 – 17,229,237	- - - - - - - - -	8485	17,229,127 – 17,229,237	+	5	116	78.50	-1.58	0.70	0.692371
5312	2R_DroMel_CAF1	17,230,959 – 17,231,079	- - - "knownCDS=Parent=FBtr0071711, FBtr0071712, FBtr0071713;Name=LBR-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17952-RB, FlyBase+Annotation+IDs:CG17952-RA, FlyBase+Annotation+IDs:CG17952-RC" - - - - -	8486	17,230,959 – 17,231,079	+	6	120	75.39	-1.69	0.50	0.517199
5313	2R_DroMel_CAF1	17,234,751 – 17,234,842	- - - - - - - - -	8487	17,234,751 – 17,234,842	+	6	101	81.34	-2.19	0.55	0.609559
5313	2R_DroMel_CAF1	17,234,751 – 17,234,842	- - - - - - - - -	8488	17,234,751 – 17,234,842	-	6	101	81.34	-2.61	0.56	0.809648
5314	2R_DroMel_CAF1	17,239,536 – 17,239,648	- - - - - - - - -	8489	17,239,536 – 17,239,648	+	5	117	93.51	-1.59	0.81	0.767032
5315	2R_DroMel_CAF1	17,239,850 – 17,239,940	- - - - - - - - -	8490	17,239,850 – 17,239,940	+	3	93	94.95	-1.52	0.98	0.661897
5316	2R_DroMel_CAF1	17,240,427 – 17,240,520	- - - - - - - - -	8491	17,240,427 – 17,240,520	+	6	117	79.50	-2.26	0.50	0.731867
5317	2R_DroMel_CAF1	17,241,571 – 17,241,662	- - - - - - - - -	8492	17,241,571 – 17,241,662	-	5	92	91.06	-1.91	0.81	0.929461
5318	2R_DroMel_CAF1	17,241,767 – 17,241,964	- - - - - - - - -	8493	17,241,767 – 17,241,873	-	4	120	81.30	-1.67	0.77	0.724996
				8494	17,241,794 – 17,241,907	-	5	120	88.77	-2.06	0.72	0.747523
				8495	17,241,833 – 17,241,947	-	4	120	94.30	-1.82	0.95	0.915736
				8496	17,241,873 – 17,241,964	+	4	115	83.02	-3.45	0.68	0.995566
5319	2R_DroMel_CAF1	17,242,044 – 17,242,141	- - - - - - - - -	8497	17,242,044 – 17,242,141	+	5	97	88.65	-1.72	0.72	0.557710
5320	2R_DroMel_CAF1	17,242,517 – 17,242,656	- - - - - - - - -	8498	17,242,517 – 17,242,616	+	5	104	96.04	-3.08	0.96	0.999974
				8499	17,242,517 – 17,242,616	-	5	104	96.04	-3.17	0.96	0.999976
				8500	17,242,541 – 17,242,656	-	5	115	98.26	-1.66	0.95	0.970797
5321	2R_DroMel_CAF1	17,243,790 – 17,243,907	- - - - - - - - -	8501	17,243,790 – 17,243,907	+	6	120	89.72	-3.57	0.76	0.869010
5322	2R_DroMel_CAF1	17,244,140 – 17,244,248	- - - - - - - - -	8502	17,244,140 – 17,244,248	-	5	120	84.49	-1.94	0.81	0.881352
5323	2R_DroMel_CAF1	17,245,060 – 17,245,272	- - - - - - - - -	8503	17,245,060 – 17,245,169	+	5	109	97.80	-1.78	0.89	0.944299
				8504	17,245,060 – 17,245,169	-	5	109	97.80	-2.50	0.95	0.999620
				8505	17,245,169 – 17,245,272	+	5	107	93.52	-2.42	0.74	0.790676
5324	2R_DroMel_CAF1	17,245,472 – 17,245,586	- - - - - - - - -	8506	17,245,472 – 17,245,586	-	6	118	81.22	-2.29	0.53	0.624457
5325	2R_DroMel_CAF1	17,245,803 – 17,245,901	- - - - - - - - -	8507	17,245,803 – 17,245,901	+	6	113	81.76	-2.69	0.54	0.743190
5325	2R_DroMel_CAF1	17,245,803 – 17,245,901	- - - - - - - - -	8508	17,245,803 – 17,245,901	-	6	113	81.76	-3.21	0.55	0.892750
5326	2R_DroMel_CAF1	17,255,272 – 17,255,366	- - - - - - - - -	8509	17,255,272 – 17,255,366	+	6	105	90.51	-2.42	0.83	0.873662
5327	2R_DroMel_CAF1	17,259,634 – 17,259,737	- - - - - - - - -	8510	17,259,634 – 17,259,737	+	6	116	72.47	-2.36	0.29	0.830021
5328	2R_DroMel_CAF1	17,261,672 – 17,261,776	- - - - - - - - -	8511	17,261,672 – 17,261,776	-	6	120	78.29	-1.64	0.55	0.500000
5329	2R_DroMel_CAF1	17,261,881 – 17,261,979	- - - - - - - - -	8512	17,261,881 – 17,261,979	+	6	102	82.64	-1.80	0.73	0.684623
5330	2R_DroMel_CAF1	17,262,046 – 17,262,145	- - - - - - - - -	8513	17,262,046 – 17,262,145	+	5	102	88.70	-1.63	0.87	0.878184
5331	2R_DroMel_CAF1	17,263,097 – 17,263,192	- - - - - - - - -	8514	17,263,097 – 17,263,192	+	6	100	77.63	-2.24	0.53	0.908300
5331	2R_DroMel_CAF1	17,263,097 – 17,263,192	- - - - - - - - -	8515	17,263,097 – 17,263,192	-	6	100	77.63	-2.17	0.45	0.682835
5332	2R_DroMel_CAF1	17,266,491 – 17,266,635	- - - - - - - - -	8516	17,266,491 – 17,266,595	+	5	119	73.16	-1.78	0.24	0.771540
				8517	17,266,491 – 17,266,595	-	5	119	73.16	-1.87	0.18	0.887863
				8518	17,266,524 – 17,266,635	-	5	120	78.57	-2.07	0.47	0.763924
5333	2R_DroMel_CAF1	17,266,666 – 17,266,762	- - - - - - - - -	8519	17,266,666 – 17,266,762	-	5	120	75.96	-2.01	0.31	0.868056
5334	2R_DroMel_CAF1	17,268,217 – 17,268,331	- - - - - - - - -	8520	17,268,217 – 17,268,331	+	3	114	91.23	-2.06	0.84	0.644531
5335	2R_DroMel_CAF1	17,270,615 – 17,270,735	- - - - - - - - -	8521	17,270,615 – 17,270,735	+	3	120	97.78	-2.16	0.88	0.695003
5336	2R_DroMel_CAF1	17,270,861 – 17,270,962	- - - - - - - - -	8522	17,270,861 – 17,270,962	-	3	120	84.21	-1.40	0.84	0.538525
5337	2R_DroMel_CAF1	17,277,853 – 17,277,970	- - - - - - - - -	8523	17,277,853 – 17,277,970	+	5	120	74.54	-2.17	0.29	0.962770
5337	2R_DroMel_CAF1	17,277,853 – 17,277,970	- - - - - - - - -	8524	17,277,853 – 17,277,970	-	5	120	74.54	-2.56	0.37	0.995610
5338	2R_DroMel_CAF1	17,278,009 – 17,278,143	- - - - - - - - -	8525	17,278,009 – 17,278,109	-	3	100	99.33	-1.99	1.01	0.918934
				8526	17,278,036 – 17,278,143	+	3	110	97.58	-2.39	0.98	0.961874
				8527	17,278,036 – 17,278,143	-	3	110	97.58	-1.45	1.01	0.652979
5339	2R_DroMel_CAF1	17,278,579 – 17,278,693	- - - - - - - - -	8528	17,278,579 – 17,278,693	+	3	114	97.65	-1.55	1.00	0.700950
5340	2R_DroMel_CAF1	17,279,622 – 17,279,812	- - - - - - - - -	8529	17,279,622 – 17,279,732	+	6	120	77.35	-2.24	0.56	0.937589
				8530	17,279,622 – 17,279,732	-	6	120	77.35	-1.87	0.69	0.942065
				8531	17,279,654 – 17,279,772	+	6	120	73.87	-2.57	0.41	0.979354
				8532	17,279,654 – 17,279,772	-	6	120	73.87	-2.23	0.45	0.939893
				8533	17,279,692 – 17,279,812	+	6	120	74.51	-2.18	0.52	0.960445
				8534	17,279,692 – 17,279,812	-	6	120	74.51	-2.88	0.73	0.993118
5341	2R_DroMel_CAF1	17,280,086 – 17,280,198	- - - - - - - - -	8535	17,280,086 – 17,280,198	-	4	112	96.43	-1.67	0.94	0.725967
5342	2R_DroMel_CAF1	17,280,628 – 17,280,730	- - - - - - - - -	8536	17,280,628 – 17,280,730	+	4	114	88.58	-1.59	0.78	0.651060
5343	2R_DroMel_CAF1	17,282,644 – 17,282,750	- - - - - - - - -	8537	17,282,644 – 17,282,750	+	6	120	71.62	-1.80	0.39	0.527325
5344	2R_DroMel_CAF1	17,284,064 – 17,284,173	- - - - - - - - -	8538	17,284,064 – 17,284,173	-	6	120	83.59	-2.23	0.83	0.878762
5345	2R_DroMel_CAF1	17,284,513 – 17,284,623	- - - - - - - - -	8539	17,284,513 – 17,284,623	-	6	120	66.98	-2.09	0.25	0.601138
5346	2R_DroMel_CAF1	17,288,716 – 17,288,808	- - "RNAmicro=f:17288716_t:17288817_strand:+_p:0.643047" - - - - - -	8540	17,288,716 – 17,288,808	+	5	102	75.16	-2.81	0.66	0.999079
5347	2R_DroMel_CAF1	17,288,888 – 17,289,031	- - - - - - - - -	8541	17,288,888 – 17,288,991	-	6	120	79.80	-1.93	0.62	0.799974
				8542	17,288,913 – 17,289,031	+	6	119	84.79	-3.32	0.75	0.884540
				8543	17,288,913 – 17,289,031	-	6	119	84.79	-4.04	0.73	0.936231
5348	2R_DroMel_CAF1	17,289,367 – 17,289,490	- - - - - - - - -	8544	17,289,367 – 17,289,457	-	3	93	94.18	-1.93	0.91	0.727059
				8545	17,289,389 – 17,289,490	+	4	104	87.25	-1.72	0.69	0.628244
				8546	17,289,389 – 17,289,490	-	4	104	87.25	-2.21	0.78	0.922735
5349	2R_DroMel_CAF1	17,289,606 – 17,289,732	- - - - - - - - -	8547	17,289,606 – 17,289,706	+	6	120	80.19	-3.66	0.60	0.980429
				8548	17,289,606 – 17,289,706	-	6	120	80.19	-2.52	0.67	0.936540
				8549	17,289,640 – 17,289,732	+	6	120	80.70	-2.45	0.79	0.939161
				8550	17,289,640 – 17,289,732	-	6	120	80.70	-1.46	0.80	0.747842
5350	2R_DroMel_CAF1	17,289,952 – 17,290,050	- - - - - - - - -	8551	17,289,952 – 17,290,050	-	3	100	72.95	-1.78	0.73	0.993591
5351	2R_DroMel_CAF1	17,290,329 – 17,290,471	- - - - - - - - -	8552	17,290,329 – 17,290,448	-	4	120	89.87	-2.54	0.88	0.987030
				8553	17,290,368 – 17,290,471	+	4	103	94.63	-1.72	0.92	0.825317
				8554	17,290,368 – 17,290,471	-	4	103	94.63	-2.08	0.85	0.839442
5352	2R_DroMel_CAF1	17,290,622 – 17,290,713	- - - - - - - - -	8555	17,290,622 – 17,290,713	-	6	120	77.05	-2.05	0.52	0.842119
5353	2R_DroMel_CAF1	17,294,033 – 17,294,148	- - - - - - - - -	8556	17,294,033 – 17,294,148	+	5	120	85.04	-2.24	0.79	0.946090
5354	2R_DroMel_CAF1	17,294,325 – 17,294,422	- - - - - - - - -	8557	17,294,325 – 17,294,422	-	3	97	92.39	-1.87	0.89	0.663689
5355	2R_DroMel_CAF1	17,294,593 – 17,294,706	- - - - - - - - -	8558	17,294,593 – 17,294,706	+	4	113	95.13	-3.96	0.91	0.976194
5356	2R_DroMel_CAF1	17,295,832 – 17,295,928	- - - - - - - - -	8559	17,295,832 – 17,295,928	-	6	120	86.25	-1.77	0.92	0.904870
5357	2R_DroMel_CAF1	17,297,722 – 17,297,906	- - - - - - - - -	8560	17,297,722 – 17,297,833	-	6	117	74.29	-2.33	0.54	0.983561
5357	2R_DroMel_CAF1	17,297,722 – 17,297,906	- - - - - - - - -	8561	17,297,802 – 17,297,906	-	6	110	60.52	-1.68	0.39	0.788379
5358	2R_DroMel_CAF1	17,300,575 – 17,300,665	- - - - - - - - -	8562	17,300,575 – 17,300,665	+	4	91	89.13	-1.51	0.76	0.565273
5359	2R_DroMel_CAF1	17,305,127 – 17,305,245	- - - - - - - - -	8563	17,305,127 – 17,305,220	-	5	105	86.84	-2.40	0.71	0.885717
5359	2R_DroMel_CAF1	17,305,127 – 17,305,245	- - - - - - - - -	8564	17,305,154 – 17,305,245	-	5	104	81.79	-1.92	0.69	0.799435
5360	2R_DroMel_CAF1	17,306,637 – 17,306,740	- - - "knownCDS=Parent=FBtr0071744;Name=CG18735-cds, ;Dbxref=FlyBase+Annotation+IDs:CG18735-RA" - - - - -	8565	17,306,637 – 17,306,740	+	6	103	68.93	-1.88	0.42	0.843471
5361	2R_DroMel_CAF1	17,309,183 – 17,309,291	- - - - - - - - -	8566	17,309,183 – 17,309,291	+	6	113	79.21	-1.47	0.78	0.837651
5362	2R_DroMel_CAF1	17,311,589 – 17,311,684	- - - - - - - - -	8567	17,311,589 – 17,311,684	-	5	120	58.74	-2.13	0.63	0.982304
5363	2R_DroMel_CAF1	17,313,559 – 17,313,665	- - - - - - - - -	8568	17,313,559 – 17,313,665	-	6	111	86.56	-2.82	0.72	0.532799
5364	2R_DroMel_CAF1	17,326,895 – 17,326,988	- - - - - - - - -	8569	17,326,895 – 17,326,988	+	6	114	79.64	-2.40	0.60	0.916044
5365	2R_DroMel_CAF1	17,329,012 – 17,329,132	- - - "knownCDS=Parent=FBtr0071742;Name=CG13492-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13492-RB" - - - - -	8570	17,329,012 – 17,329,132	-	6	120	83.53	-2.72	0.67	0.738350
5366	2R_DroMel_CAF1	17,332,400 – 17,332,520	- - - "knownCDS=Parent=FBtr0071741;Name=CG13492-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13492-RA" - - - - -	8571	17,332,400 – 17,332,520	+	6	120	71.83	-1.61	0.50	0.637262
5367	2R_DroMel_CAF1	17,337,504 – 17,337,610	- - - "knownCDS=Parent=FBtr0071741;Name=CG13492-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13492-RA" - - - - -	8572	17,337,504 – 17,337,610	-	6	106	81.90	-1.61	0.78	0.723550
5368	2R_DroMel_CAF1	17,343,074 – 17,343,189	- - - "knownCDS=Parent=FBtr0071739;Name=CG4377-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4377-RA" - - - - -	8573	17,343,074 – 17,343,189	+	6	116	77.43	-2.81	0.51	0.982224
5369	2R_DroMel_CAF1	17,343,749 – 17,343,853	- - - "knownCDS=Parent=FBtr0071739;Name=CG4377-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4377-RA" - - - - -	8574	17,343,749 – 17,343,853	+	6	104	82.44	-1.51	0.75	0.604496
5370	2R_DroMel_CAF1	17,348,195 – 17,348,299	- - - - - - - - -	8575	17,348,195 – 17,348,299	+	6	108	81.34	-2.51	0.70	0.899481
5370	2R_DroMel_CAF1	17,348,195 – 17,348,299	- - - - - - - - -	8576	17,348,195 – 17,348,299	-	6	108	81.34	-2.38	0.75	0.906752
5371	2R_DroMel_CAF1	17,349,226 – 17,349,330	- - - - - - - - -	8577	17,349,226 – 17,349,330	+	6	111	73.69	-1.78	0.55	0.871119
5372	2R_DroMel_CAF1	17,350,668 – 17,350,786	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000130; Name=Dmel_Gly_TCC_14000130;TFAMID=DmelGTCC-17350750" "tRNAscan=type:Gly:anticodon:TCC f:17350678_t:17350759_strand=-_cove=72.21" - - "Rfam=AC007803.7/2169-2240_RF00005;tRNA;\|9e-35" - - - "Flybase=FBgn0050406:CR30406:cytosolic_tRNA_gene\|1e-36"	8578	17,350,668 – 17,350,786	+	6	120	81.17	-1.64	0.83	0.804935
5373	2R_DroMel_CAF1	17,351,114 – 17,351,210	- - - - - - - - -	8579	17,351,114 – 17,351,210	-	5	98	94.63	-1.66	0.79	0.628170
5374	2R_DroMel_CAF1	17,351,776 – 17,351,948	- - - - - - - - -	8580	17,351,776 – 17,351,880	+	5	106	92.71	-1.13	0.92	0.579747
5374	2R_DroMel_CAF1	17,351,776 – 17,351,948	- - - - - - - - -	8581	17,351,844 – 17,351,948	-	5	104	96.63	-1.91	0.81	0.803288
5375	2R_DroMel_CAF1	17,353,411 – 17,353,504	- - - - - - - - -	8582	17,353,411 – 17,353,504	-	6	111	78.97	-1.82	0.55	0.628387
5376	2R_DroMel_CAF1	17,355,935 – 17,356,073	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000131; Name=Dmel_Gly_TCC_14000131;TFAMID=DmelGTCC-17356060" - - - "Rfam=AC007803.7/2169-2240_RF00005;tRNA;\|1e-34" - - - "Flybase=FBgn0050406:CR30406:cytosolic_tRNA_gene\|1e-36"	8583	17,355,935 – 17,356,033	+	6	113	73.88	-1.05	0.75	0.851221
				8584	17,355,935 – 17,356,033	-	6	113	73.88	-1.44	0.75	0.956116
				8585	17,355,965 – 17,356,073	+	6	113	85.97	-2.42	0.92	0.986512
5377	2R_DroMel_CAF1	17,358,320 – 17,358,412	- - - - - - - - -	8586	17,358,320 – 17,358,412	+	6	98	86.61	-1.49	0.93	0.828154
5378	2R_DroMel_CAF1	17,360,366 – 17,360,460	- - - - - - - - -	8587	17,360,366 – 17,360,460	+	6	118	80.76	-3.28	0.59	0.957033
5378	2R_DroMel_CAF1	17,360,366 – 17,360,460	- - - - - - - - -	8588	17,360,366 – 17,360,460	-	6	118	80.76	-1.77	0.58	0.520099
5379	2R_DroMel_CAF1	17,363,246 – 17,363,345	- - - - - - - - -	8589	17,363,246 – 17,363,345	+	6	112	79.64	-2.39	0.51	0.806543
5380	2R_DroMel_CAF1	17,369,623 – 17,369,724	- - - - - - - - -	8590	17,369,623 – 17,369,724	-	5	102	88.11	-2.18	0.76	0.916556
5381	2R_DroMel_CAF1	17,371,432 – 17,371,530	- - - - - - - - -	8591	17,371,432 – 17,371,530	+	4	101	96.48	-1.71	0.89	0.622651
5382	2R_DroMel_CAF1	17,373,126 – 17,373,240	- - - "knownCDS=Parent=FBtr0071735;Name=comr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13493-RA" - - - - -	8592	17,373,126 – 17,373,240	+	5	114	91.49	-1.48	0.82	0.728689
5383	2R_DroMel_CAF1	17,386,739 – 17,386,830	- - - - - - - - -	8593	17,386,739 – 17,386,830	+	5	94	79.67	-1.76	0.69	0.776608
5383	2R_DroMel_CAF1	17,386,739 – 17,386,830	- - - - - - - - -	8594	17,386,739 – 17,386,830	-	5	94	79.67	-2.35	0.78	0.984166
5384	2R_DroMel_CAF1	17,386,961 – 17,387,171	- - - - - - - - -	8595	17,386,961 – 17,387,069	+	6	112	81.71	-2.80	0.72	0.918060
				8596	17,386,992 – 17,387,105	+	6	117	85.19	-3.11	0.72	0.754665
				8597	17,387,031 – 17,387,145	+	6	115	86.40	-2.29	0.79	0.691187
				8598	17,387,069 – 17,387,171	+	6	103	82.89	-1.89	0.66	0.584749
5385	2R_DroMel_CAF1	17,390,095 – 17,390,186	- - - - - - - - -	8599	17,390,095 – 17,390,186	-	5	112	73.84	-1.28	-0.00	0.593813
5386	2R_DroMel_CAF1	17,397,888 – 17,397,979	- - - - - - - - -	8600	17,397,888 – 17,397,979	-	3	91	95.24	-2.25	0.80	0.514090
5387	2R_DroMel_CAF1	17,403,856 – 17,403,947	- - - - - - - - -	8601	17,403,856 – 17,403,947	-	6	115	76.97	-1.60	0.70	0.910584
5388	2R_DroMel_CAF1	17,406,958 – 17,407,049	- - - - - - - - -	8602	17,406,958 – 17,407,049	+	6	100	81.09	-1.21	0.79	0.573627
5389	2R_DroMel_CAF1	17,408,940 – 17,409,031	- - - - - - - - -	8603	17,408,940 – 17,409,031	-	5	97	91.65	-1.38	0.87	0.763637
5390	2R_DroMel_CAF1	17,409,609 – 17,409,713	- - - - - - - - -	8604	17,409,609 – 17,409,713	+	5	110	65.58	-2.13	0.39	0.911273
5391	2R_DroMel_CAF1	17,411,666 – 17,411,841	- - - - - - - - -	8605	17,411,666 – 17,411,765	-	6	108	79.48	-1.74	0.56	0.548799
5391	2R_DroMel_CAF1	17,411,666 – 17,411,841	- - - - - - - - -	8606	17,411,734 – 17,411,841	+	4	116	88.18	-2.55	0.71	0.878378
5392	2R_DroMel_CAF1	17,413,019 – 17,413,124	- - - - - - - - -	8607	17,413,019 – 17,413,124	-	6	109	92.20	-2.30	0.79	0.500000
5393	2R_DroMel_CAF1	17,414,506 – 17,414,614	- - - - - - - - -	8608	17,414,506 – 17,414,614	-	6	108	97.53	-1.54	0.91	0.930101
5394	2R_DroMel_CAF1	17,419,175 – 17,419,265	- - - - - - - - -	8609	17,419,175 – 17,419,265	-	4	93	85.53	-1.86	0.78	0.820889
5395	2R_DroMel_CAF1	17,420,006 – 17,420,110	- - - - - - - - -	8610	17,420,006 – 17,420,110	+	6	118	77.26	-1.96	0.51	0.737519
5396	2R_DroMel_CAF1	17,420,343 – 17,420,434	- - - - - - - - -	8611	17,420,343 – 17,420,434	+	6	103	82.51	-1.99	0.62	0.554795
5397	2R_DroMel_CAF1	17,432,782 – 17,432,879	- - - - - - - - -	8612	17,432,782 – 17,432,879	-	6	104	83.47	-1.76	0.72	0.576888
5398	2R_DroMel_CAF1	17,436,877 – 17,436,973	- - - - - - - - -	8613	17,436,877 – 17,436,973	-	3	96	84.03	-2.20	0.71	0.781547
5399	2R_DroMel_CAF1	17,438,940 – 17,439,049	- - - - - - - - -	8614	17,438,940 – 17,439,049	+	5	109	94.50	-1.35	0.86	0.695465
5400	2R_DroMel_CAF1	17,439,592 – 17,439,688	- - - - - - - - -	8615	17,439,592 – 17,439,688	-	6	112	82.38	-2.59	0.55	0.630138
5401	2R_DroMel_CAF1	17,441,295 – 17,441,386	- - - - - - - - -	8616	17,441,295 – 17,441,386	+	5	98	79.45	-2.40	0.48	0.922012
5402	2R_DroMel_CAF1	17,446,911 – 17,447,022	- - - - - - - - -	8617	17,446,911 – 17,447,022	-	3	117	63.58	-1.54	0.58	0.969020
5403	2R_DroMel_CAF1	17,447,652 – 17,447,772	- - - - - - - - -	8618	17,447,652 – 17,447,772	+	4	120	91.74	-1.94	0.75	0.627013
5403	2R_DroMel_CAF1	17,447,652 – 17,447,772	- - - - - - - - -	8619	17,447,652 – 17,447,772	-	4	120	91.74	-2.52	0.75	0.820753
5404	2R_DroMel_CAF1	17,449,852 – 17,449,951	- - - - - - - - -	8620	17,449,852 – 17,449,951	+	5	107	81.17	-2.79	0.69	0.990231
5404	2R_DroMel_CAF1	17,449,852 – 17,449,951	- - - - - - - - -	8621	17,449,852 – 17,449,951	-	5	107	81.17	-2.78	0.67	0.988452
5405	2R_DroMel_CAF1	17,450,130 – 17,450,263	- - - - - - - - -	8622	17,450,130 – 17,450,229	+	4	106	71.71	-2.38	0.47	0.938057
5405	2R_DroMel_CAF1	17,450,130 – 17,450,263	- - - - - - - - -	8623	17,450,154 – 17,450,263	+	6	120	70.95	-1.72	0.51	0.826802
5406	2R_DroMel_CAF1	17,450,582 – 17,450,673	- - - - - - - - -	8624	17,450,582 – 17,450,673	+	5	92	82.15	-1.61	0.67	0.524806
5407	2R_DroMel_CAF1	17,451,646 – 17,451,749	- - - "knownCDS=Parent=FBtr0071722;Name=CG13487-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13487-RA" - - - - -	8625	17,451,646 – 17,451,749	-	6	103	81.25	-2.18	0.56	0.654806
5408	2R_DroMel_CAF1	17,457,084 – 17,457,259	- - - - - - - - -	8626	17,457,084 – 17,457,181	+	3	97	95.85	-3.00	0.81	0.790884
5408	2R_DroMel_CAF1	17,457,084 – 17,457,259	- - - - - - - - -	8627	17,457,152 – 17,457,259	-	3	107	99.38	-2.68	0.99	0.979267
5409	2R_DroMel_CAF1	17,457,286 – 17,457,427	- - - - - - - - -	8628	17,457,286 – 17,457,394	-	3	108	97.52	-2.03	0.96	0.873930
5409	2R_DroMel_CAF1	17,457,286 – 17,457,427	- - - - - - - - -	8629	17,457,316 – 17,457,427	-	3	111	98.80	-2.30	1.00	0.957809
5410	2R_DroMel_CAF1	17,462,840 – 17,462,944	- - - - - - - - -	8630	17,462,840 – 17,462,944	-	3	117	78.93	-1.85	0.65	0.797424
5411	2R_DroMel_CAF1	17,462,974 – 17,463,068	- - - - - - - - -	8631	17,462,974 – 17,463,068	-	5	120	74.70	-1.62	0.16	0.723297
5412	2R_DroMel_CAF1	17,463,674 – 17,463,781	- - - - - - - - -	8632	17,463,674 – 17,463,781	-	4	120	75.33	-1.86	0.60	0.796041
5413	2R_DroMel_CAF1	17,464,432 – 17,464,606	- - - - - - - - -	8633	17,464,432 – 17,464,532	+	3	120	83.53	-1.18	0.87	0.533793
				8634	17,464,432 – 17,464,532	-	3	120	83.53	-1.54	0.92	0.908698
				8635	17,464,503 – 17,464,606	-	3	120	81.05	-1.48	0.80	0.661627
5414	2R_DroMel_CAF1	17,465,477 – 17,465,589	- - - - - - - - -	8636	17,465,477 – 17,465,589	+	3	120	89.20	-2.18	0.83	0.752581
5415	2R_DroMel_CAF1	17,465,697 – 17,465,811	- - - - - - - - -	8637	17,465,697 – 17,465,811	-	3	114	99.42	-1.87	0.98	0.830141
5416	2R_DroMel_CAF1	17,466,349 – 17,466,469	- - - - - - - - -	8638	17,466,349 – 17,466,469	-	3	120	92.78	-1.74	0.89	0.562014
5417	2R_DroMel_CAF1	17,467,450 – 17,467,570	- - - - - - - - -	8639	17,467,450 – 17,467,570	+	3	120	95.00	-1.66	0.93	0.586216
5418	2R_DroMel_CAF1	17,468,249 – 17,468,448	- - - - - - - - -	8640	17,468,249 – 17,468,368	+	3	120	97.21	-2.29	0.89	0.795534
				8641	17,468,288 – 17,468,408	+	3	120	99.44	-1.96	1.01	0.902682
				8642	17,468,288 – 17,468,408	-	3	120	99.44	-1.54	0.98	0.644610
				8643	17,468,328 – 17,468,448	+	3	120	98.33	-1.54	1.01	0.710617
5419	2R_DroMel_CAF1	17,469,049 – 17,469,289	- - - - - - - - -	8644	17,469,049 – 17,469,169	+	3	120	98.89	-2.91	0.99	0.985588
				8645	17,469,049 – 17,469,169	-	3	120	98.89	-2.51	1.00	0.975576
				8646	17,469,169 – 17,469,289	+	3	120	98.33	-2.87	0.88	0.901663
5420	2R_DroMel_CAF1	17,469,950 – 17,470,057	- - - - - - - - -	8647	17,469,950 – 17,470,057	-	3	107	96.88	-3.33	0.92	0.976222
5421	2R_DroMel_CAF1	17,470,314 – 17,470,422	- - - - - - - - -	8648	17,470,314 – 17,470,422	-	3	120	87.93	-1.22	0.93	0.572961
5422	2R_DroMel_CAF1	17,470,500 – 17,470,608	- - - - - - - - -	8649	17,470,500 – 17,470,608	+	3	117	93.57	-2.58	0.81	0.734772
5423	2R_DroMel_CAF1	17,472,757 – 17,472,859	- - - - - - - - -	8650	17,472,757 – 17,472,859	+	5	106	92.66	-1.87	0.76	0.692989
5424	2R_DroMel_CAF1	17,475,302 – 17,475,515	- - - "knownCDS=Parent=FBtr0071725;Name=CG13490-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13490-RA" - - - - -	8651	17,475,302 – 17,475,414	+	6	120	81.74	-2.04	0.63	0.706399
5424	2R_DroMel_CAF1	17,475,302 – 17,475,515		8652	17,475,414 – 17,475,515	+	6	108	80.96	-1.64	0.61	0.531340
5425	2R_DroMel_CAF1	17,476,824 – 17,476,941	- - - "knownCDS=Parent=FBtr0071725;Name=CG13490-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13490-RA" - - - - -	8653	17,476,824 – 17,476,941	+	6	118	83.14	-2.46	0.59	0.559463
5426	2R_DroMel_CAF1	17,477,258 – 17,477,385	- - - - - - - - -	8654	17,477,258 – 17,477,353	+	6	95	98.60	-0.86	0.96	0.713916
				8655	17,477,281 – 17,477,385	+	6	104	96.60	-1.17	0.89	0.548290
				8656	17,477,281 – 17,477,385	-	6	104	96.60	-0.60	1.00	0.567795
5427	2R_DroMel_CAF1	17,477,976 – 17,478,091	- - - - - - - - -	8657	17,477,976 – 17,478,091	+	5	116	85.86	-1.60	0.82	0.668115
5428	2R_DroMel_CAF1	17,481,428 – 17,481,614	- - - - - - - - -	8658	17,481,428 – 17,481,546	+	5	118	81.42	-2.13	0.54	0.688938
				8659	17,481,506 – 17,481,614	+	5	120	80.02	-1.86	0.63	0.732698
				8660	17,481,506 – 17,481,614	-	5	120	80.02	-2.16	0.47	0.726579
5429	2R_DroMel_CAF1	17,481,871 – 17,481,991	- - - "knownCDS=Parent=FBtr0071726;Name=CG9304-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9304-RA" - - - - -	8661	17,481,871 – 17,481,991	-	6	120	79.72	-1.75	0.57	0.583681
5430	2R_DroMel_CAF1	17,482,573 – 17,482,693	- - - "knownCDS=Parent=FBtr0071726;Name=CG9304-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9304-RA" - - - - -	8662	17,482,573 – 17,482,693	+	6	120	83.50	-1.81	0.72	0.594907
5431	2R_DroMel_CAF1	17,486,515 – 17,486,631	- - - "knownCDS=Parent=FBtr0071732;Name=Gr58b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13495-RA" - - - - -	8663	17,486,515 – 17,486,631	+	6	116	79.66	-1.81	0.59	0.669497
5432	2R_DroMel_CAF1	17,487,007 – 17,487,124	- - - "knownCDS=Parent=FBtr0071732;Name=Gr58b-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13495-RA" - - - - -	8664	17,487,007 – 17,487,124	+	6	117	76.87	-1.55	0.56	0.532675
5432	2R_DroMel_CAF1	17,487,007 – 17,487,124		8665	17,487,007 – 17,487,124	-	6	117	76.87	-1.49	0.59	0.607720
5433	2R_DroMel_CAF1	17,487,975 – 17,488,135	- - - "knownCDS=Parent=FBtr0071728;Name=Gr58a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30396-RA" - - - - -	8666	17,487,975 – 17,488,095	+	4	120	80.97	-1.76	0.72	0.758280
				8667	17,487,975 – 17,488,095	-	4	120	80.97	-1.57	0.83	0.710991
				8668	17,488,015 – 17,488,135	+	4	120	81.94	-3.38	0.73	0.998562
				8669	17,488,015 – 17,488,135	-	4	120	81.94	-1.69	0.77	0.726197
5434	2R_DroMel_CAF1	17,488,375 – 17,488,495	- - - "knownCDS=Parent=FBtr0071728;Name=Gr58a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30396-RA" - - - - -	8670	17,488,375 – 17,488,495	+	3	120	84.87	-2.20	0.74	0.771845
5435	2R_DroMel_CAF1	17,488,797 – 17,488,899	- - - - - - - - -	8671	17,488,797 – 17,488,899	-	4	120	81.47	-2.05	0.57	0.609365
5436	2R_DroMel_CAF1	17,489,088 – 17,489,315	- - - - - - - - -	8672	17,489,088 – 17,489,200	+	4	120	89.66	-2.10	0.83	0.924157
5436	2R_DroMel_CAF1	17,489,088 – 17,489,315	- - - - - - - - -	8673	17,489,200 – 17,489,315	+	4	120	94.85	-2.17	0.78	0.596526
5437	2R_DroMel_CAF1	17,489,544 – 17,489,683	- - - - - - - - -	8674	17,489,544 – 17,489,664	-	4	120	85.61	-1.69	0.70	0.652124
5437	2R_DroMel_CAF1	17,489,544 – 17,489,683	- - - - - - - - -	8675	17,489,584 – 17,489,683	-	3	120	83.24	-1.42	0.84	0.599205
5438	2R_DroMel_CAF1	17,489,706 – 17,489,826	- - - - - - - - -	8676	17,489,706 – 17,489,826	+	4	120	84.44	-1.83	0.62	0.553432
5439	2R_DroMel_CAF1	17,489,946 – 17,490,222	- - - - - - - - -	8677	17,489,946 – 17,490,063	-	4	120	95.78	-1.77	0.89	0.713045
				8678	17,490,063 – 17,490,183	+	4	120	91.67	-1.89	0.80	0.776169
				8679	17,490,063 – 17,490,183	-	4	120	91.67	-1.89	0.80	0.776784
				8680	17,490,103 – 17,490,222	+	4	120	91.74	-1.90	0.73	0.536771
				8681	17,490,103 – 17,490,222	-	4	120	91.74	-2.56	0.86	0.978534
5440	2R_DroMel_CAF1	17,490,448 – 17,490,568	- - - - - - - - -	8682	17,490,448 – 17,490,568	+	4	120	94.17	-1.56	0.88	0.646192
5441	2R_DroMel_CAF1	17,490,832 – 17,490,990	- - - - - - - - -	8683	17,490,832 – 17,490,950	+	4	120	93.53	-1.74	0.84	0.698783
				8684	17,490,832 – 17,490,950	-	4	120	93.53	-2.57	0.80	0.862128
				8685	17,490,870 – 17,490,990	-	4	120	97.92	-1.84	0.94	0.709537
5442	2R_DroMel_CAF1	17,491,684 – 17,491,791	- - - - - - - - -	8686	17,491,684 – 17,491,791	+	4	120	92.92	-1.37	0.88	0.512074
5443	2R_DroMel_CAF1	17,492,369 – 17,492,489	- - - - - - - - -	8687	17,492,369 – 17,492,489	+	4	120	93.06	-2.12	0.78	0.740808
5444	2R_DroMel_CAF1	17,492,529 – 17,492,714	- - - - - - - - -	8688	17,492,529 – 17,492,638	-	3	110	93.62	-1.26	0.99	0.508630
				8689	17,492,598 – 17,492,714	+	3	120	92.13	-2.64	0.87	0.915591
				8690	17,492,598 – 17,492,714	-	3	120	92.13	-2.20	0.83	0.672630
5445	2R_DroMel_CAF1	17,500,508 – 17,500,601	- - - - - - - - -	8691	17,500,508 – 17,500,601	-	5	107	73.33	-2.51	0.54	0.996984
5446	2R_DroMel_CAF1	17,517,856 – 17,517,946	- - - - - - - - -	8692	17,517,856 – 17,517,946	-	6	107	81.46	-1.62	0.65	0.598302
5447	2R_DroMel_CAF1	17,519,383 – 17,519,492	- - - - - - - - -	8693	17,519,383 – 17,519,492	+	6	115	77.13	-1.70	0.65	0.886948
5447	2R_DroMel_CAF1	17,519,383 – 17,519,492	- - - - - - - - -	8694	17,519,383 – 17,519,492	-	6	115	77.13	-2.23	0.41	0.641201
5448	2R_DroMel_CAF1	17,523,160 – 17,523,265	- - - - - - - - -	8695	17,523,160 – 17,523,265	+	5	113	70.30	-1.68	0.20	0.523110
5449	2R_DroMel_CAF1	17,536,078 – 17,536,204	- - - - - - - - -	8696	17,536,078 – 17,536,186	+	6	112	81.61	-2.78	0.71	0.916706
				8697	17,536,078 – 17,536,186	-	6	112	81.61	-2.38	0.59	0.745066
				8698	17,536,107 – 17,536,204	+	6	119	86.90	-2.54	0.75	0.536562
				8699	17,536,107 – 17,536,204	-	6	119	86.90	-2.17	0.87	0.919841
5450	2R_DroMel_CAF1	17,537,574 – 17,537,723	- - - - - - - - -	8700	17,537,574 – 17,537,671	-	6	103	76.39	-1.08	0.70	0.645305
				8701	17,537,599 – 17,537,693	-	6	96	90.56	-1.58	0.86	0.663460
				8702	17,537,631 – 17,537,723	-	6	98	70.40	-0.96	0.78	0.916472
5451	2R_DroMel_CAF1	17,541,277 – 17,541,376	- - - - - - - - -	8703	17,541,277 – 17,541,376	+	6	120	79.77	-2.99	0.47	0.924017
5452	2R_DroMel_CAF1	17,548,997 – 17,549,118	- - - - - - - - -	8704	17,548,997 – 17,549,089	+	6	108	80.22	-2.58	0.67	0.938585
				8705	17,548,997 – 17,549,089	-	6	108	80.22	-2.32	0.64	0.901532
				8706	17,549,016 – 17,549,118	+	6	107	84.30	-1.98	0.74	0.597666
5453	2R_DroMel_CAF1	17,554,741 – 17,554,835	- - - - - - - - -	8707	17,554,741 – 17,554,835	-	6	110	77.48	-1.32	0.67	0.701451
5454	2R_DroMel_CAF1	17,555,016 – 17,555,108	- - - - - - - - -	8708	17,555,016 – 17,555,108	-	6	92	82.88	-1.53	0.70	0.514060
5455	2R_DroMel_CAF1	17,559,262 – 17,559,353	- - - - - - - - -	8709	17,559,262 – 17,559,353	+	6	102	82.72	-1.97	0.61	0.515344
5456	2R_DroMel_CAF1	17,559,572 – 17,559,674	- - - - - - - - -	8710	17,559,572 – 17,559,674	-	6	105	83.99	-3.61	0.59	0.786004
5457	2R_DroMel_CAF1	17,566,028 – 17,566,128	- - - - - - - - -	8711	17,566,028 – 17,566,128	-	6	104	77.26	-2.09	0.59	0.928754
5458	2R_DroMel_CAF1	17,567,339 – 17,567,454	- - - "knownCDS=Parent=FBtr0071804;Name=CG13501-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13501-RA" - - - - -	8712	17,567,339 – 17,567,454	-	6	115	78.38	-1.47	0.61	0.577787
5459	2R_DroMel_CAF1	17,569,435 – 17,569,532	- - - - - - - - -	8713	17,569,435 – 17,569,532	+	6	102	77.72	-2.25	0.73	0.972481
5459	2R_DroMel_CAF1	17,569,435 – 17,569,532	- - - - - - - - -	8714	17,569,435 – 17,569,532	-	6	102	77.72	-1.56	0.60	0.658051
5460	2R_DroMel_CAF1	17,587,981 – 17,588,079	- - - - - - - - -	8715	17,587,981 – 17,588,079	+	3	112	76.07	-2.27	0.58	0.951451
5460	2R_DroMel_CAF1	17,587,981 – 17,588,079	- - - - - - - - -	8716	17,587,981 – 17,588,079	-	3	112	76.07	-3.30	0.54	0.996354
5461	2R_DroMel_CAF1	17,588,247 – 17,588,338	- - - - - - - - -	8717	17,588,247 – 17,588,338	+	3	120	69.65	-2.64	0.41	0.581305
5462	2R_DroMel_CAF1	17,594,951 – 17,595,042	- - - - - - - - -	8718	17,594,951 – 17,595,042	+	6	106	72.63	-2.27	0.38	0.917700
5463	2R_DroMel_CAF1	17,598,638 – 17,598,732	- - - - - - - - -	8719	17,598,638 – 17,598,732	-	3	96	72.92	-2.10	0.67	0.998085
5464	2R_DroMel_CAF1	17,599,091 – 17,599,200	- - - - - - - - -	8720	17,599,091 – 17,599,200	+	5	109	95.87	-1.61	0.90	0.961401
5465	2R_DroMel_CAF1	17,600,975 – 17,601,090	- - - "knownCDS=Parent=FBtr0071797;Name=CG11073-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11073-RA" - - - - -	8721	17,600,975 – 17,601,090	+	6	118	81.38	-1.92	0.59	0.593694
5466	2R_DroMel_CAF1	17,604,562 – 17,604,660	- - - - - - - - -	8722	17,604,562 – 17,604,660	+	5	99	94.51	-1.65	0.87	0.945163
5467	2R_DroMel_CAF1	17,606,224 – 17,606,331	- - - - - - - - -	8723	17,606,224 – 17,606,331	+	3	107	94.36	-2.98	0.92	0.976288
5467	2R_DroMel_CAF1	17,606,224 – 17,606,331	- - - - - - - - -	8724	17,606,224 – 17,606,331	-	3	107	94.36	-2.85	0.89	0.947447
5468	2R_DroMel_CAF1	17,606,448 – 17,606,542	- - - - - - - - -	8725	17,606,448 – 17,606,542	-	6	102	82.27	-2.06	0.60	0.574144
5469	2R_DroMel_CAF1	17,606,982 – 17,607,073	- - - - - - - - -	8726	17,606,982 – 17,607,073	+	4	105	83.86	-2.83	0.62	0.939061
5470	2R_DroMel_CAF1	17,608,662 – 17,608,853	- - - - - - - - -	8727	17,608,662 – 17,608,758	-	4	120	78.23	-2.06	0.54	0.614836
				8728	17,608,696 – 17,608,787	-	5	109	79.14	-1.98	0.52	0.694375
				8729	17,608,726 – 17,608,827	-	6	120	75.46	-2.53	0.64	0.991237
				8730	17,608,758 – 17,608,853	-	6	109	83.93	-2.23	0.68	0.579684
5471	2R_DroMel_CAF1	17,609,531 – 17,609,634	- - - - - - - - -	8731	17,609,531 – 17,609,634	-	5	103	81.52	-1.84	0.78	0.841317
5472	2R_DroMel_CAF1	17,611,636 – 17,611,743	- - - "knownCDS=Parent=FBtr0071758;Name=CG6613-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6613-RA" - - - - -	8732	17,611,636 – 17,611,743	-	6	114	79.51	-1.31	0.73	0.708278
5473	2R_DroMel_CAF1	17,612,400 – 17,612,515	- - - "knownCDS=Parent=FBtr0071758;Name=CG6613-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6613-RA" - - - - -	8733	17,612,400 – 17,612,515	+	6	116	77.28	-1.64	0.59	0.730419
5474	2R_DroMel_CAF1	17,616,763 – 17,616,866	- - - - - - - - -	8734	17,616,763 – 17,616,866	+	3	103	97.41	-1.79	0.97	0.780440
5475	2R_DroMel_CAF1	17,618,147 – 17,618,261	- - - "knownCDS=Parent=FBtr0071791, FBtr0071792, FBtr0071793, FBtr0071794, FBtr0071795, FBtr0071796;Name=CG13503-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13503-RB, FlyBase+Annotation+IDs:CG13503-RF, FlyBase+Annotation+IDs:CG13503-RA, FlyBase+Annotation+IDs:CG13503-RD, FlyBase+Annotation+IDs:CG13503-RC, FlyBase+Annotation+IDs:CG13503-RE" - - - - -	8735	17,618,147 – 17,618,261	+	6	117	80.12	-1.36	0.68	0.629156
5475	2R_DroMel_CAF1	17,618,147 – 17,618,261		8736	17,618,147 – 17,618,261	-	6	117	80.12	-1.82	0.65	0.795919
5476	2R_DroMel_CAF1	17,630,583 – 17,630,679	- - - "knownCDS=Parent=FBtr0071761;Name=mei-S332-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5303-RA" - - - - -	8737	17,630,583 – 17,630,679	+	6	96	87.78	-2.04	0.80	0.589343
5477	2R_DroMel_CAF1	17,631,226 – 17,631,336	- - - "knownCDS=Parent=FBtr0071761;Name=mei-S332-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5303-RA" - - - - -	8738	17,631,226 – 17,631,336	+	5	110	92.09	-1.58	0.79	0.691447
5478	2R_DroMel_CAF1	17,631,749 – 17,631,848	- - - "knownCDS=Parent=FBtr0071761;Name=mei-S332-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5303-RA" - - - - -	8739	17,631,749 – 17,631,848	+	6	99	77.85	-1.99	0.64	0.929402
5479	2R_DroMel_CAF1	17,634,146 – 17,634,266	- - - "knownCDS=Parent=FBtr0071790;Name=GM130-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11061-RA" - - - - -	8740	17,634,146 – 17,634,266	+	6	120	75.33	-2.20	0.41	0.807274
5480	2R_DroMel_CAF1	17,635,142 – 17,635,232	- - - - - - - - -	8741	17,635,142 – 17,635,232	-	3	99	83.62	-1.42	0.82	0.500000
5481	2R_DroMel_CAF1	17,636,296 – 17,636,395	- - - "knownCDS=Parent=FBtr0071762;Name=NtR-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6698-RA" - - - - -	8742	17,636,296 – 17,636,395	-	6	99	78.45	-2.00	0.56	0.819749
5482	2R_DroMel_CAF1	17,641,516 – 17,641,716	- - - - - - - - -	8743	17,641,516 – 17,641,636	-	3	120	77.50	-2.52	0.55	0.888167
				8744	17,641,556 – 17,641,676	+	3	120	86.67	-1.83	0.75	0.500000
				8745	17,641,556 – 17,641,676	-	3	120	86.67	-2.71	0.75	0.872641
				8746	17,641,596 – 17,641,716	-	3	120	73.86	-1.67	0.58	0.658744
5483	2R_DroMel_CAF1	17,642,950 – 17,643,059	- - - - - - - - -	8747	17,642,950 – 17,643,059	-	3	120	87.97	-3.06	0.74	0.888759
5484	2R_DroMel_CAF1	17,643,431 – 17,643,591	- - - - - - - - -	8748	17,643,431 – 17,643,551	+	3	120	94.71	-1.61	0.95	0.639301
5484	2R_DroMel_CAF1	17,643,431 – 17,643,591	- - - - - - - - -	8749	17,643,471 – 17,643,591	+	3	120	96.11	-2.01	0.92	0.788824
5485	2R_DroMel_CAF1	17,645,950 – 17,646,047	- - - - - - - - -	8750	17,645,950 – 17,646,047	-	3	120	76.12	-2.85	0.61	0.998737
5486	2R_DroMel_CAF1	17,646,147 – 17,646,256	- - - - - - - - -	8751	17,646,147 – 17,646,256	+	3	120	81.38	-1.61	0.68	0.525466
5486	2R_DroMel_CAF1	17,646,147 – 17,646,256	- - - - - - - - -	8752	17,646,147 – 17,646,256	-	3	120	81.38	-1.68	0.68	0.571670
5487	2R_DroMel_CAF1	17,648,368 – 17,648,488	- - - "knownCDS=Parent=FBtr0071766;Name=gom-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6727-RA" - - - - -	8753	17,648,368 – 17,648,488	-	5	120	92.67	-1.71	0.87	0.960530
5488	2R_DroMel_CAF1	17,649,015 – 17,649,255	- - - - - - - - -	8754	17,649,015 – 17,649,135	+	5	120	79.11	-1.85	0.63	0.774347
5488	2R_DroMel_CAF1	17,649,015 – 17,649,255	- - - - - - - - -	8755	17,649,135 – 17,649,255	-	5	120	87.01	-1.95	0.66	0.537798
5489	2R_DroMel_CAF1	17,649,667 – 17,649,860	- - - - - - - - -	8756	17,649,667 – 17,649,781	+	5	120	92.40	-1.39	0.80	0.553870
5489	2R_DroMel_CAF1	17,649,667 – 17,649,860	- - - - - - - - -	8757	17,649,741 – 17,649,860	+	5	120	96.57	-1.57	0.89	0.908918
5490	2R_DroMel_CAF1	17,650,171 – 17,650,285	- - - - - - - - -	8758	17,650,171 – 17,650,285	+	5	120	88.91	-1.61	0.86	0.853765
5491	2R_DroMel_CAF1	17,650,325 – 17,650,485	- - - - - - - - -	8759	17,650,325 – 17,650,445	+	5	120	98.33	-1.68	0.93	0.958827
				8760	17,650,325 – 17,650,445	-	5	120	98.33	-1.69	0.94	0.966571
				8761	17,650,365 – 17,650,485	-	5	120	95.00	-2.37	0.83	0.990407
5492	2R_DroMel_CAF1	17,650,645 – 17,650,875	- - - - - - - - -	8762	17,650,645 – 17,650,762	+	5	120	95.09	-2.28	0.83	0.984607
				8763	17,650,645 – 17,650,762	-	5	120	95.09	-1.93	0.86	0.978902
				8764	17,650,725 – 17,650,835	-	5	120	89.56	-2.52	0.73	0.917222
				8765	17,650,762 – 17,650,875	-	5	120	89.37	-1.88	0.77	0.836535
5493	2R_DroMel_CAF1	17,650,909 – 17,651,026	- - - - - - - - -	8766	17,650,909 – 17,651,026	+	5	120	90.06	-1.59	0.78	0.655910
5494	2R_DroMel_CAF1	17,651,083 – 17,651,188	- - - - - - - - -	8767	17,651,083 – 17,651,188	+	4	119	80.26	-2.23	0.66	0.943509
5495	2R_DroMel_CAF1	17,651,362 – 17,651,479	- - - - - - - - -	8768	17,651,362 – 17,651,479	-	5	120	98.39	-1.42	0.97	0.884083
5496	2R_DroMel_CAF1	17,651,576 – 17,651,767	- - - - - - - - -	8769	17,651,576 – 17,651,695	+	5	120	96.73	-2.17	0.94	0.999032
				8770	17,651,576 – 17,651,695	-	5	120	96.73	-1.62	0.93	0.970796
				8771	17,651,616 – 17,651,727	+	5	120	89.41	-3.70	0.70	0.969483
				8772	17,651,616 – 17,651,727	-	5	120	89.41	-3.72	0.81	0.999153
				8773	17,651,656 – 17,651,767	+	5	120	89.41	-1.76	0.73	0.613787
				8774	17,651,656 – 17,651,767	-	5	120	89.41	-2.74	0.83	0.997875
5497	2R_DroMel_CAF1	17,652,481 – 17,652,675	- - - - - - - - -	8775	17,652,481 – 17,652,597	+	5	120	94.39	-1.95	0.82	0.936198
				8776	17,652,521 – 17,652,637	+	5	120	91.84	-2.17	0.77	0.915762
				8777	17,652,557 – 17,652,675	+	5	120	93.73	-1.28	0.88	0.708315
5498	2R_DroMel_CAF1	17,652,856 – 17,653,148	- - - - - - - - -	8778	17,652,856 – 17,652,976	+	5	120	94.61	-2.46	0.92	0.999784
				8779	17,652,856 – 17,652,976	-	5	120	94.61	-2.41	0.90	0.999460
				8780	17,652,936 – 17,653,055	-	5	120	81.50	-1.59	0.66	0.507892
				8781	17,653,055 – 17,653,148	-	5	120	77.52	-1.27	0.78	0.689979
5499	2R_DroMel_CAF1	17,653,278 – 17,653,465	- - - - - - - - -	8782	17,653,278 – 17,653,386	+	5	120	92.46	-2.93	0.88	0.999811
				8783	17,653,278 – 17,653,386	-	5	120	92.46	-1.93	0.80	0.918133
				8784	17,653,318 – 17,653,426	+	5	120	92.82	-2.24	0.88	0.998120
				8785	17,653,318 – 17,653,426	-	5	120	92.82	-1.29	0.86	0.648439
				8786	17,653,358 – 17,653,465	+	5	120	93.05	-2.32	0.85	0.996584
				8787	17,653,358 – 17,653,465	-	5	120	93.05	-2.03	0.85	0.987499
5500	2R_DroMel_CAF1	17,653,542 – 17,653,742	- - - - - - - - -	8788	17,653,542 – 17,653,662	+	5	120	95.50	-1.57	1.00	0.992460
				8789	17,653,582 – 17,653,702	-	5	120	96.50	-1.45	0.97	0.960077
				8790	17,653,622 – 17,653,742	-	5	120	94.92	-1.55	0.90	0.946123
5501	2R_DroMel_CAF1	17,654,008 – 17,654,327	- - - - - - - - -	8791	17,654,008 – 17,654,128	+	5	120	90.75	-1.45	0.80	0.613721
				8792	17,654,128 – 17,654,247	+	5	120	95.99	-1.96	0.84	0.952716
				8793	17,654,128 – 17,654,247	-	5	120	95.99	-1.96	0.82	0.904954
				8794	17,654,167 – 17,654,287	+	5	120	98.33	-2.66	0.96	0.999692
				8795	17,654,167 – 17,654,287	-	5	120	98.33	-4.69	0.98	0.999572
				8796	17,654,207 – 17,654,327	-	5	120	99.67	-2.33	0.98	0.997857
5502	2R_DroMel_CAF1	17,654,623 – 17,654,742	- - - - - - - - -	8797	17,654,623 – 17,654,742	-	5	120	91.88	-1.92	0.73	0.584143
5503	2R_DroMel_CAF1	17,654,845 – 17,654,965	- - - - - - - - -	8798	17,654,845 – 17,654,965	+	5	120	89.69	-1.66	0.75	0.612193
5504	2R_DroMel_CAF1	17,655,076 – 17,655,413	- - - - - - - - -	8799	17,655,076 – 17,655,189	-	5	120	91.54	-1.70	0.91	0.983098
				8800	17,655,109 – 17,655,223	-	5	120	92.44	-1.39	0.84	0.686629
				8801	17,655,189 – 17,655,303	+	5	120	85.59	-1.74	0.68	0.544204
				8802	17,655,189 – 17,655,303	-	5	120	85.59	-1.82	0.70	0.644902
				8803	17,655,223 – 17,655,343	+	4	120	83.31	-1.95	0.61	0.622719
				8804	17,655,223 – 17,655,343	-	4	120	83.31	-2.50	0.76	0.977338
				8805	17,655,303 – 17,655,413	+	4	110	87.10	-1.44	0.78	0.557996
				8806	17,655,303 – 17,655,413	-	4	110	87.10	-2.42	0.94	0.991872
5505	2R_DroMel_CAF1	17,655,548 – 17,655,708	- - - - - - - - -	8807	17,655,548 – 17,655,668	-	5	120	93.17	-2.53	0.89	0.999586
				8808	17,655,588 – 17,655,708	+	5	120	93.17	-1.79	0.95	0.996745
				8809	17,655,588 – 17,655,708	-	5	120	93.17	-2.76	0.90	0.999841
5506	2R_DroMel_CAF1	17,655,798 – 17,655,914	- - - - - - - - -	8810	17,655,798 – 17,655,914	-	5	120	89.58	-1.98	0.76	0.836397
5507	2R_DroMel_CAF1	17,656,134 – 17,656,290	- - - - - - - - -	8811	17,656,134 – 17,656,250	-	5	120	85.29	-1.69	0.81	0.733432
5507	2R_DroMel_CAF1	17,656,134 – 17,656,290	- - - - - - - - -	8812	17,656,174 – 17,656,290	-	5	120	85.71	-1.97	0.76	0.834691
5508	2R_DroMel_CAF1	17,656,330 – 17,656,603	- - - - - - - - -	8813	17,656,330 – 17,656,449	+	5	120	96.31	-1.50	0.94	0.958847
				8814	17,656,330 – 17,656,449	-	5	120	96.31	-1.63	0.81	0.602666
				8815	17,656,370 – 17,656,489	+	5	120	95.64	-2.93	0.93	0.999932
				8816	17,656,370 – 17,656,489	-	5	120	95.64	-3.69	0.87	0.999735
				8817	17,656,410 – 17,656,527	+	5	120	97.04	-1.28	0.90	0.627154
				8818	17,656,410 – 17,656,527	-	5	120	97.04	-2.44	0.85	0.989219
				8819	17,656,449 – 17,656,563	+	5	120	95.45	-1.31	0.87	0.644979
				8820	17,656,489 – 17,656,603	+	5	120	93.80	-1.80	0.83	0.932991
5509	2R_DroMel_CAF1	17,656,683 – 17,656,803	- - - - - - - - -	8821	17,656,683 – 17,656,803	+	5	120	98.00	-2.01	0.96	0.997184
5509	2R_DroMel_CAF1	17,656,683 – 17,656,803	- - - - - - - - -	8822	17,656,683 – 17,656,803	-	5	120	98.00	-1.60	0.98	0.977257
5510	2R_DroMel_CAF1	17,657,500 – 17,657,620	- - - - - - - - -	8823	17,657,500 – 17,657,620	+	5	120	96.48	-1.94	0.87	0.974586
5511	2R_DroMel_CAF1	17,657,692 – 17,657,805	- - - - - - - - -	8824	17,657,692 – 17,657,805	+	5	120	89.40	-1.80	0.70	0.512142
5512	2R_DroMel_CAF1	17,658,313 – 17,658,593	- - - - - - - - -	8825	17,658,313 – 17,658,433	-	5	120	97.17	-2.34	0.90	0.997573
				8826	17,658,353 – 17,658,473	-	5	120	93.58	-1.75	0.79	0.760273
				8827	17,658,473 – 17,658,593	-	5	120	95.00	-2.04	0.88	0.994392
5513	2R_DroMel_CAF1	17,658,919 – 17,659,036	- - - - - - - - -	8828	17,658,919 – 17,659,036	-	5	120	96.62	-1.36	0.96	0.911940
5514	2R_DroMel_CAF1	17,659,233 – 17,659,341	- - - - - - - - -	8829	17,659,233 – 17,659,341	+	5	120	89.00	-1.39	0.91	0.748790
5514	2R_DroMel_CAF1	17,659,233 – 17,659,341	- - - - - - - - -	8830	17,659,233 – 17,659,341	-	5	120	89.00	-2.14	0.79	0.940489
5515	2R_DroMel_CAF1	17,659,381 – 17,659,617	- - - - - - - - -	8831	17,659,381 – 17,659,498	-	5	120	89.60	-1.81	0.79	0.854861
5515	2R_DroMel_CAF1	17,659,381 – 17,659,617	- - - - - - - - -	8832	17,659,498 – 17,659,617	+	5	120	96.65	-1.49	0.88	0.832151
5516	2R_DroMel_CAF1	17,659,974 – 17,660,092	- - - - - - - - -	8833	17,659,974 – 17,660,092	+	5	120	91.46	-2.45	0.90	0.999599
5516	2R_DroMel_CAF1	17,659,974 – 17,660,092	- - - - - - - - -	8834	17,659,974 – 17,660,092	-	5	120	91.46	-2.87	0.86	0.999547
5517	2R_DroMel_CAF1	17,660,482 – 17,660,602	- - - - - - - - -	8835	17,660,482 – 17,660,602	+	5	120	96.83	-1.23	0.90	0.600013
5518	2R_DroMel_CAF1	17,660,762 – 17,661,066	- - - "knownCDS=texon10718;Parent=CG_RGUI_GID_mRNA_40004205, CG_DGIL_SNO_28357826" - - - - -	8836	17,660,762 – 17,660,866	+	5	120	90.31	-2.50	0.75	0.934999
				8837	17,660,786 – 17,660,906	+	5	120	97.08	-3.36	0.95	0.999953
				8838	17,660,826 – 17,660,946	+	5	120	97.92	-4.72	0.97	0.999615
				8839	17,660,826 – 17,660,946	-	5	120	97.92	-1.63	0.92	0.938158
				8840	17,660,866 – 17,660,986	+	5	120	98.08	-3.71	0.97	0.999923
				8841	17,660,866 – 17,660,986	-	5	120	98.08	-2.93	0.96	0.999866
				8842	17,660,906 – 17,661,026	+	5	120	97.00	-1.14	0.98	0.690800
				8843	17,660,946 – 17,661,066	+	5	120	94.83	-1.12	0.94	0.662966
5519	2R_DroMel_CAF1	17,661,186 – 17,661,306	- - - - - - - - -	8844	17,661,186 – 17,661,306	+	5	120	97.58	-1.67	0.92	0.961378
5520	2R_DroMel_CAF1	17,663,126 – 17,663,236	- - - - - - - - -	8845	17,663,126 – 17,663,236	+	4	120	91.03	-2.31	0.84	0.948820
5521	2R_DroMel_CAF1	17,663,300 – 17,663,420	- - - - - - - - -	8846	17,663,300 – 17,663,420	+	4	120	93.75	-2.27	0.78	0.729919
5522	2R_DroMel_CAF1	17,663,889 – 17,664,101	- - - - - - - - -	8847	17,663,889 – 17,663,994	-	4	120	83.06	-1.77	0.80	0.794303
5522	2R_DroMel_CAF1	17,663,889 – 17,664,101	- - - - - - - - -	8848	17,663,994 – 17,664,101	-	3	120	91.93	-1.56	0.93	0.595194
5523	2R_DroMel_CAF1	17,664,374 – 17,664,492	- - - - - - - - -	8849	17,664,374 – 17,664,492	+	4	120	96.50	-1.67	0.93	0.700193
5524	2R_DroMel_CAF1	17,664,611 – 17,664,869	- - - - - - - - -	8850	17,664,611 – 17,664,709	+	4	120	84.07	-2.78	0.71	0.980636
				8851	17,664,611 – 17,664,709	-	4	120	84.07	-1.75	0.65	0.609181
				8852	17,664,690 – 17,664,789	+	4	120	87.35	-1.33	0.86	0.510493
				8853	17,664,749 – 17,664,869	+	4	120	100.00	-2.68	0.97	0.854448
				8854	17,664,749 – 17,664,869	-	4	120	100.00	-2.23	1.00	0.785168
5525	2R_DroMel_CAF1	17,665,139 – 17,665,299	- - - - - - - - -	8855	17,665,139 – 17,665,259	+	4	120	99.58	-3.30	0.96	0.899261
				8856	17,665,139 – 17,665,259	-	4	120	99.58	-2.20	1.00	0.818214
				8857	17,665,179 – 17,665,299	-	3	120	98.89	-1.52	0.99	0.638645
5526	2R_DroMel_CAF1	17,665,512 – 17,665,627	- - - - - - - - -	8858	17,665,512 – 17,665,627	+	4	120	90.14	-1.70	0.87	0.817345
5526	2R_DroMel_CAF1	17,665,512 – 17,665,627	- - - - - - - - -	8859	17,665,512 – 17,665,627	-	4	120	90.14	-1.97	0.97	0.976371
5527	2R_DroMel_CAF1	17,665,777 – 17,666,173	- - - - - - - - -	8860	17,665,777 – 17,665,893	+	4	120	84.72	-1.89	0.63	0.612508
				8861	17,665,813 – 17,665,933	+	4	120	89.43	-3.02	0.77	0.961513
				8862	17,665,813 – 17,665,933	-	4	120	89.43	-2.33	0.83	0.953135
				8863	17,665,933 – 17,666,053	+	4	120	95.38	-2.02	0.84	0.730644
				8864	17,665,973 – 17,666,093	-	4	120	84.85	-1.81	0.61	0.520836
				8865	17,666,013 – 17,666,133	+	4	120	84.43	-1.58	0.66	0.541944
				8866	17,666,013 – 17,666,133	-	4	120	84.43	-2.06	0.62	0.670856
				8867	17,666,053 – 17,666,173	+	4	120	88.32	-3.95	0.79	0.986198
				8868	17,666,053 – 17,666,173	-	4	120	88.32	-3.66	0.64	0.798685
5528	2R_DroMel_CAF1	17,666,213 – 17,666,333	- - - - - - - - -	8869	17,666,213 – 17,666,333	+	4	120	99.58	-2.84	0.98	0.911945
5528	2R_DroMel_CAF1	17,666,213 – 17,666,333	- - - - - - - - -	8870	17,666,213 – 17,666,333	-	4	120	99.58	-1.85	1.00	0.614327
5529	2R_DroMel_CAF1	17,666,516 – 17,666,622	- - - - - - - - -	8871	17,666,516 – 17,666,622	+	4	120	88.89	-2.93	0.79	0.974886
5529	2R_DroMel_CAF1	17,666,516 – 17,666,622	- - - - - - - - -	8872	17,666,516 – 17,666,622	-	4	120	88.89	-2.46	0.65	0.651562
5530	2R_DroMel_CAF1	17,667,143 – 17,667,297	- - - - - - - - -	8873	17,667,143 – 17,667,257	+	4	120	92.59	-1.92	0.80	0.747006
5530	2R_DroMel_CAF1	17,667,143 – 17,667,297	- - - - - - - - -	8874	17,667,181 – 17,667,297	+	4	120	95.20	-2.10	0.97	0.966115
5531	2R_DroMel_CAF1	17,667,454 – 17,667,609	- - - - - - - - -	8875	17,667,454 – 17,667,569	+	3	119	89.80	-2.45	0.72	0.592387
				8876	17,667,454 – 17,667,569	-	3	119	89.80	-2.75	0.74	0.751237
				8877	17,667,494 – 17,667,609	+	3	119	89.24	-3.46	0.73	0.878044
				8878	17,667,494 – 17,667,609	-	3	119	89.24	-3.88	0.71	0.884586
5532	2R_DroMel_CAF1	17,667,899 – 17,667,994	- - - - - - - - -	8879	17,667,899 – 17,667,994	-	3	120	82.09	-2.38	0.68	0.903064
5533	2R_DroMel_CAF1	17,668,074 – 17,668,308	- - - - - - - - -	8880	17,668,074 – 17,668,190	-	4	120	97.19	-1.73	0.89	0.552107
5533	2R_DroMel_CAF1	17,668,074 – 17,668,308	- - - - - - - - -	8881	17,668,190 – 17,668,308	-	4	120	85.51	-1.14	0.95	0.517058
5534	2R_DroMel_CAF1	17,668,483 – 17,668,590	- - - - - - - - -	8882	17,668,483 – 17,668,590	-	4	120	92.55	-1.51	0.82	0.537414
5535	2R_DroMel_CAF1	17,677,916 – 17,678,023	- - - "knownCDS=Parent=FBtr0071763, FBtr0071764, FBtr0100521;Name=a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6741-RA, FlyBase+Annotation+IDs:CG6741-RB, FlyBase+Annotation+IDs:CG6741-RC" - - - - -	8883	17,677,916 – 17,678,023	-	6	120	81.58	-2.01	0.63	0.692304
5536	2R_DroMel_CAF1	17,685,481 – 17,685,601	- - - "knownCDS=Parent=FBtr0071786;Name=CG11170-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11170-RB" - - - - -	8884	17,685,481 – 17,685,601	-	6	120	79.39	-1.80	0.54	0.528934
5537	2R_DroMel_CAF1	17,686,770 – 17,686,860	- - - "knownCDS=Parent=FBtr0071768;Name=CG30279-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30279-RA" - - - - -	8885	17,686,770 – 17,686,860	+	5	114	80.16	-1.93	0.55	0.637712
5537	2R_DroMel_CAF1	17,686,770 – 17,686,860		8886	17,686,770 – 17,686,860	-	5	114	80.16	-2.11	0.60	0.855567
5538	2R_DroMel_CAF1	17,688,506 – 17,688,598	- - - - - - - - -	8887	17,688,506 – 17,688,598	-	3	105	75.25	-1.70	0.64	0.853952
5539	2R_DroMel_CAF1	17,690,242 – 17,690,341	- - - - - - - - -	8888	17,690,242 – 17,690,341	+	5	108	83.41	-1.77	0.67	0.603131
5540	2R_DroMel_CAF1	17,691,458 – 17,691,698	- - - "knownCDS=Parent=FBtr0071770;Name=MED16-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5465-RA" - - - - -	8889	17,691,458 – 17,691,578	-	5	120	92.83	-1.17	0.94	0.745012
5540	2R_DroMel_CAF1	17,691,458 – 17,691,698		8890	17,691,578 – 17,691,698	+	5	120	95.00	-1.20	0.91	0.667287
5541	2R_DroMel_CAF1	17,691,738 – 17,691,858	- - "RNAmicro=f:17691738_t:17691857_strand:-_p:0.757744" "knownCDS=Parent=FBtr0071770;Name=MED16-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5465-RA" - - - - -	8891	17,691,738 – 17,691,858	+	5	120	94.50	-2.33	0.82	0.982421
5541	2R_DroMel_CAF1	17,691,738 – 17,691,858		8892	17,691,738 – 17,691,858	-	5	120	94.50	-2.66	0.91	0.999848
5542	2R_DroMel_CAF1	17,692,098 – 17,692,218	- - - "knownCDS=Parent=FBtr0071770;Name=MED16-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5465-RA" - - - - -	8893	17,692,098 – 17,692,218	-	5	120	91.17	-2.11	0.77	0.897572
5543	2R_DroMel_CAF1	17,692,378 – 17,692,498	- - - "knownCDS=Parent=FBtr0071770;Name=MED16-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5465-RA" - - - - -	8894	17,692,378 – 17,692,498	-	5	120	95.75	-1.91	0.90	0.992771
5544	2R_DroMel_CAF1	17,692,978 – 17,693,098	- - - "knownCDS=Parent=FBtr0071770;Name=MED16-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5465-RA" - - - - -	8895	17,692,978 – 17,693,098	-	5	120	94.17	-1.74	0.93	0.993031
5545	2R_DroMel_CAF1	17,693,178 – 17,693,298	- - - - - - - - -	8896	17,693,178 – 17,693,298	+	5	120	90.41	-1.46	0.81	0.661169
5546	2R_DroMel_CAF1	17,693,824 – 17,693,919	- - - "knownCDS=Parent=FBtr0071771;Name=CG5625-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5625-RB" - - - - -	8897	17,693,824 – 17,693,919	+	6	120	79.87	-1.09	0.79	0.593017
5547	2R_DroMel_CAF1	17,693,946 – 17,694,040	- - - - - - - - -	8898	17,693,946 – 17,694,040	+	5	120	73.86	-2.13	0.42	0.950904
5548	2R_DroMel_CAF1	17,694,079 – 17,694,196	- - - "knownCDS=Parent=FBtr0071771, FBtr0071772;Name=CG5625-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5625-RB, FlyBase+Annotation+IDs:CG5625-RA" - - - - -	8899	17,694,079 – 17,694,196	+	6	120	81.20	-1.34	0.73	0.612703
5549	2R_DroMel_CAF1	17,712,361 – 17,712,481	- - - "knownCDS=Parent=FBtr0071783;Name=CG3292-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3292-RA" - - - - -	8900	17,712,361 – 17,712,481	+	6	120	80.94	-1.63	0.61	0.520766
5550	2R_DroMel_CAF1	17,715,551 – 17,715,671	- - - - - - - - -	8901	17,715,551 – 17,715,671	+	5	120	90.58	-2.34	0.74	0.888127
5551	2R_DroMel_CAF1	17,718,188 – 17,718,302	- - - "knownCDS=Parent=FBtr0071781;Name=CG3264-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3264-RA" - - - - -	8902	17,718,188 – 17,718,302	-	6	114	83.04	-2.34	0.64	0.649993
5552	2R_DroMel_CAF1	17,722,189 – 17,722,299	- - - - - - - - -	8903	17,722,189 – 17,722,299	+	5	120	82.30	-1.80	0.78	0.795912
5553	2R_DroMel_CAF1	17,724,303 – 17,724,415	- - - - - - - - -	8904	17,724,303 – 17,724,415	+	5	113	96.62	-2.08	0.90	0.996101
5554	2R_DroMel_CAF1	17,725,101 – 17,725,200	- - - "knownCDS=Parent=FBtr0071780;Name=CG30278-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30278-RA" - - - - -	8905	17,725,101 – 17,725,200	-	3	99	84.56	-1.64	0.78	0.529504
5555	2R_DroMel_CAF1	17,738,509 – 17,738,608	- - - - - - - - -	8906	17,738,509 – 17,738,608	-	6	116	78.48	-2.13	0.49	0.710976
5556	2R_DroMel_CAF1	17,746,760 – 17,746,860	- - - - - - - - -	8907	17,746,760 – 17,746,860	+	6	103	74.83	-2.47	0.51	0.984026
5557	2R_DroMel_CAF1	17,749,281 – 17,749,379	- - - - - - - - -	8908	17,749,281 – 17,749,379	+	6	111	83.06	-1.70	0.70	0.569459
5558	2R_DroMel_CAF1	17,749,726 – 17,749,817	- - - - - - - - -	8909	17,749,726 – 17,749,817	+	6	103	74.71	-2.93	0.50	0.996341
5558	2R_DroMel_CAF1	17,749,726 – 17,749,817	- - - - - - - - -	8910	17,749,726 – 17,749,817	-	6	103	74.71	-2.68	0.23	0.721768
5559	2R_DroMel_CAF1	17,750,808 – 17,750,912	- - - - - - - - -	8911	17,750,808 – 17,750,912	-	6	104	77.54	-3.12	0.56	0.992377
5560	2R_DroMel_CAF1	17,758,802 – 17,758,901	- - - - - - - - -	8912	17,758,802 – 17,758,901	+	6	110	84.84	-2.65	0.71	0.641867
5561	2R_DroMel_CAF1	17,768,556 – 17,768,660	- - - - - - - - -	8913	17,768,556 – 17,768,660	-	6	120	74.48	-2.47	0.56	0.990317
5562	2R_DroMel_CAF1	17,772,593 – 17,772,683	- - - - - - - - -	8914	17,772,593 – 17,772,683	+	5	91	98.23	-1.69	0.91	0.941866
5562	2R_DroMel_CAF1	17,772,593 – 17,772,683	- - - - - - - - -	8915	17,772,593 – 17,772,683	-	5	91	98.23	-1.62	0.94	0.946891
5563	2R_DroMel_CAF1	17,773,226 – 17,773,356	- - - - - - - - -	8916	17,773,226 – 17,773,322	+	5	101	89.98	-1.37	0.79	0.500000
				8917	17,773,249 – 17,773,356	+	5	112	90.97	-1.97	0.95	0.998285
				8918	17,773,249 – 17,773,356	-	5	112	90.97	-1.66	0.84	0.894162
5564	2R_DroMel_CAF1	17,773,470 – 17,773,577	- - - - - - - - -	8919	17,773,470 – 17,773,577	+	5	119	81.74	-1.79	0.67	0.679529
5565	2R_DroMel_CAF1	17,778,925 – 17,779,015	- - - - - - - - -	8920	17,778,925 – 17,779,015	+	5	92	84.43	-2.27	0.71	0.892418
5566	2R_DroMel_CAF1	17,788,210 – 17,788,302	- - - - - - - - -	8921	17,788,210 – 17,788,302	+	6	106	77.51	-2.20	0.77	0.973323
5567	2R_DroMel_CAF1	17,788,382 – 17,788,489	- - - "knownCDS=Parent=FBtr0071775, FBtr0071776;Name=dve-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5799-RA, FlyBase+Annotation+IDs:CG5799-RB" - - - - -	8922	17,788,382 – 17,788,489	+	6	114	79.39	-1.28	0.68	0.616069
5568	2R_DroMel_CAF1	17,791,307 – 17,791,406	- - - "knownCDS=Parent=FBtr0071775, FBtr0071776;Name=dve-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5799-RA, FlyBase+Annotation+IDs:CG5799-RB" - - - - -	8923	17,791,307 – 17,791,406	-	6	99	80.33	-2.68	0.47	0.789545
5569	2R_DroMel_CAF1	17,792,401 – 17,792,491	- - - "knownCDS=Parent=FBtr0071775, FBtr0071776;Name=dve-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5799-RA, FlyBase+Annotation+IDs:CG5799-RB" - - - - -	8924	17,792,401 – 17,792,491	+	6	93	78.87	-1.96	0.59	0.822724
5570	2R_DroMel_CAF1	17,792,611 – 17,792,702	- - - - - - - - -	8925	17,792,611 – 17,792,702	+	6	108	64.14	-1.13	0.57	0.542889
5571	2R_DroMel_CAF1	17,797,055 – 17,797,145	- - - - - - - - -	8926	17,797,055 – 17,797,145	+	6	120	76.27	-1.60	0.55	0.600707
5572	2R_DroMel_CAF1	17,808,017 – 17,808,137	- - - "knownCDS=Parent=FBtr0071849, FBtr0071850, FBtr0071851, FBtr0071852;Name=wdp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3413-RB, FlyBase+Annotation+IDs:CG3413-RD, FlyBase+Annotation+IDs:CG3413-RC, FlyBase+Annotation+IDs:CG3413-RA" - - - - -	8927	17,808,017 – 17,808,137	+	6	120	77.72	-2.66	0.50	0.963647
5572	2R_DroMel_CAF1	17,808,017 – 17,808,137		8928	17,808,017 – 17,808,137	-	6	120	77.72	-2.26	0.52	0.894156
5573	2R_DroMel_CAF1	17,819,362 – 17,819,464	- - - - - - - - -	8929	17,819,362 – 17,819,464	+	5	105	95.54	-1.32	0.84	0.527688
5574	2R_DroMel_CAF1	17,829,411 – 17,829,502	- - - - - - - - -	8930	17,829,411 – 17,829,502	+	6	120	75.23	-2.06	0.38	0.530380
5575	2R_DroMel_CAF1	17,831,820 – 17,831,923	- - - - - - - - -	8931	17,831,820 – 17,831,923	+	6	120	82.70	-2.90	0.52	0.645935
5576	2R_DroMel_CAF1	17,831,951 – 17,832,054	- - - - - - - - -	8932	17,831,951 – 17,832,054	+	6	120	79.33	-1.97	0.58	0.776528
5577	2R_DroMel_CAF1	17,832,763 – 17,832,858	- - - "knownCDS=Parent=FBtr0071813, FBtr0071814, FBtr0071815;Name=Gp150-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5820-RA, FlyBase+Annotation+IDs:CG5820-RB, FlyBase+Annotation+IDs:CG5820-RC" - - - - -	8933	17,832,763 – 17,832,858	+	6	97	75.02	-1.57	0.62	0.838032
5578	2R_DroMel_CAF1	17,840,363 – 17,840,453	- - - - - "Noncode=n349,u329,AE003457,pgc,Drosophila_melanogaster_(fruit_fly)\|5e-16" - "ncRNAdb=DmelaNR_001908_polar\|2e-14" -	8934	17,840,363 – 17,840,453	-	6	100	78.94	-1.74	0.69	0.874744
5579	2R_DroMel_CAF1	17,842,201 – 17,842,321	- - - "knownCDS=Parent=FBtr0071846, FBtr0071847;Name=CG11206-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11206-RA, FlyBase+Annotation+IDs:CG11206-RB" - - - - -	8935	17,842,201 – 17,842,294	+	6	96	88.05	-1.89	0.80	0.507645
5579	2R_DroMel_CAF1	17,842,201 – 17,842,321		8936	17,842,229 – 17,842,321	+	6	101	81.70	-1.97	0.61	0.639290
5580	2R_DroMel_CAF1	17,842,945 – 17,843,058	- - - - - - - - -	8937	17,842,945 – 17,843,058	+	5	114	87.65	-2.39	0.64	0.584739
5581	2R_DroMel_CAF1	17,843,251 – 17,843,350	- - - "knownCDS=Parent=FBtr0071846, FBtr0071847;Name=CG11206-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11206-RA, FlyBase+Annotation+IDs:CG11206-RB" - - - - -	8938	17,843,251 – 17,843,350	-	6	120	80.42	-1.54	0.71	0.738329
5582	2R_DroMel_CAF1	17,845,383 – 17,845,481	- - - - - - - - -	8939	17,845,383 – 17,845,481	-	6	113	75.07	-1.23	0.75	0.895685
5583	2R_DroMel_CAF1	17,850,359 – 17,850,450	- - - - - - - - -	8940	17,850,359 – 17,850,450	-	6	99	70.35	-1.65	0.61	0.936562
5584	2R_DroMel_CAF1	17,855,991 – 17,856,111	- - "RNAmicro=f:17855991_t:17856110_strand:+_p:0.771322" "knownCDS=Parent=FBtr0071819;Name=CG11298-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11298-RA" - - - - -	8941	17,855,991 – 17,856,111	-	5	120	90.75	-2.54	0.82	0.995256
5585	2R_DroMel_CAF1	17,856,637 – 17,856,756	- - - - - - - - -	8942	17,856,637 – 17,856,756	-	5	120	95.49	-1.54	0.94	0.974447
5586	2R_DroMel_CAF1	17,856,948 – 17,857,045	- - - - - - - - -	8943	17,856,948 – 17,857,045	+	5	97	88.84	-2.25	0.86	0.992127
5587	2R_DroMel_CAF1	17,857,078 – 17,857,168	- - - - - - - - -	8944	17,857,078 – 17,857,168	+	4	112	85.05	-1.52	0.76	0.591536
5588	2R_DroMel_CAF1	17,859,212 – 17,859,433	- - - - - - - - -	8945	17,859,212 – 17,859,313	+	5	101	93.53	-2.34	0.77	0.919104
5588	2R_DroMel_CAF1	17,859,212 – 17,859,433	- - - - - - - - -	8946	17,859,313 – 17,859,433	+	5	120	95.33	-1.55	0.84	0.764411
5589	2R_DroMel_CAF1	17,860,203 – 17,860,377	- - - - - - - - -	8947	17,860,203 – 17,860,315	-	5	120	86.07	-2.22	0.73	0.889044
				8948	17,860,236 – 17,860,355	+	5	120	93.43	-1.47	0.79	0.511137
				8949	17,860,236 – 17,860,355	-	5	120	93.43	-2.74	0.78	0.976965
				8950	17,860,275 – 17,860,377	-	5	102	95.69	-1.78	0.91	0.989457
5590	2R_DroMel_CAF1	17,861,479 – 17,861,706	- - - - - - - - -	8951	17,861,479 – 17,861,587	+	3	108	81.17	-2.09	0.69	0.866633
				8952	17,861,551 – 17,861,666	-	3	116	95.97	-2.40	0.90	0.869037
				8953	17,861,587 – 17,861,706	-	3	120	96.66	-2.06	0.92	0.784105
5591	2R_DroMel_CAF1	17,861,814 – 17,861,926	- - - - - - - - -	8954	17,861,814 – 17,861,926	-	3	116	85.42	-1.60	0.80	0.500000
5592	2R_DroMel_CAF1	17,862,327 – 17,862,431	- - - - - - - - -	8955	17,862,327 – 17,862,431	+	4	117	84.31	-1.75	0.63	0.544470
5593	2R_DroMel_CAF1	17,862,495 – 17,862,605	- - - - - - - - -	8956	17,862,495 – 17,862,605	-	4	110	90.63	-2.26	0.78	0.888242
5594	2R_DroMel_CAF1	17,863,822 – 17,863,916	- - - - - - - - -	8957	17,863,822 – 17,863,916	-	4	101	88.07	-2.00	0.75	0.819519
5595	2R_DroMel_CAF1	17,863,985 – 17,864,104	- - - - - - - - -	8958	17,863,985 – 17,864,078	-	4	96	80.57	-1.94	0.74	0.884536
5595	2R_DroMel_CAF1	17,863,985 – 17,864,104	- - - - - - - - -	8959	17,864,007 – 17,864,104	-	3	100	87.88	-1.99	0.83	0.685221
5596	2R_DroMel_CAF1	17,865,002 – 17,865,179	- - - - - - - - -	8960	17,865,002 – 17,865,107	+	5	112	91.55	-1.45	0.84	0.757128
				8961	17,865,002 – 17,865,107	-	5	112	91.55	-2.21	0.86	0.995702
				8962	17,865,067 – 17,865,179	+	5	115	96.99	-1.17	0.93	0.593514
5597	2R_DroMel_CAF1	17,865,683 – 17,865,793	- - - - - - - - -	8963	17,865,683 – 17,865,793	+	5	110	96.91	-2.28	0.86	0.991108
5597	2R_DroMel_CAF1	17,865,683 – 17,865,793	- - - - - - - - -	8964	17,865,683 – 17,865,793	-	5	110	96.91	-3.12	0.89	0.999586
5598	2R_DroMel_CAF1	17,867,402 – 17,867,497	- - - - - - - - -	8965	17,867,402 – 17,867,497	+	5	97	90.79	-1.88	0.77	0.799244
5599	2R_DroMel_CAF1	17,868,577 – 17,868,680	- - - - - - - - -	8966	17,868,577 – 17,868,680	+	5	120	81.22	-2.77	0.72	0.991566
5599	2R_DroMel_CAF1	17,868,577 – 17,868,680	- - - - - - - - -	8967	17,868,577 – 17,868,680	-	5	120	81.22	-2.74	0.78	0.993373
5600	2R_DroMel_CAF1	17,868,966 – 17,869,227	- - - - - - - - -	8968	17,868,966 – 17,869,082	+	5	120	91.58	-1.61	0.77	0.619334
				8969	17,868,966 – 17,869,082	-	5	120	91.58	-2.05	0.95	0.999068
				8970	17,869,042 – 17,869,154	-	5	120	91.41	-1.80	0.92	0.991563
				8971	17,869,121 – 17,869,227	+	5	113	89.43	-1.62	0.77	0.655625
5601	2R_DroMel_CAF1	17,869,771 – 17,869,879	- - - - - - - - -	8972	17,869,771 – 17,869,879	+	5	108	98.24	-1.79	0.95	0.984941
5601	2R_DroMel_CAF1	17,869,771 – 17,869,879	- - - - - - - - -	8973	17,869,771 – 17,869,879	-	5	108	98.24	-1.37	0.97	0.866424
5602	2R_DroMel_CAF1	17,869,881 – 17,869,995	- - - - - - - - -	8974	17,869,881 – 17,869,995	-	5	120	86.59	-2.82	0.86	0.998493
5603	2R_DroMel_CAF1	17,870,155 – 17,870,355	- - - - - - - - -	8975	17,870,155 – 17,870,275	-	5	120	90.42	-1.72	0.75	0.628925
5603	2R_DroMel_CAF1	17,870,155 – 17,870,355	- - - - - - - - -	8976	17,870,235 – 17,870,355	-	4	120	93.06	-1.87	0.85	0.832723
5604	2R_DroMel_CAF1	17,870,665 – 17,870,818	- - - - - - - - -	8977	17,870,665 – 17,870,778	+	5	113	93.53	-1.38	0.81	0.541377
5604	2R_DroMel_CAF1	17,870,665 – 17,870,818	- - - - - - - - -	8978	17,870,698 – 17,870,818	-	5	120	94.25	-1.37	0.84	0.651518
5605	2R_DroMel_CAF1	17,871,193 – 17,871,288	- - - - - - - - -	8979	17,871,193 – 17,871,288	+	5	95	99.16	-1.22	0.97	0.563592
5606	2R_DroMel_CAF1	17,871,399 – 17,871,506	- - - - - - - - -	8980	17,871,399 – 17,871,506	-	4	117	86.16	-1.57	0.80	0.651665
5607	2R_DroMel_CAF1	17,871,897 – 17,872,009	- - - - - - - - -	8981	17,871,897 – 17,872,009	-	5	112	93.01	-1.91	0.85	0.975302
5608	2R_DroMel_CAF1	17,872,407 – 17,872,509	- - - - - - - - -	8982	17,872,407 – 17,872,509	+	5	103	96.00	-1.26	0.92	0.749824
5609	2R_DroMel_CAF1	17,873,598 – 17,873,733	- - - - - - - - -	8983	17,873,598 – 17,873,711	-	5	113	94.34	-1.31	0.87	0.686634
				8984	17,873,638 – 17,873,733	+	5	95	96.42	-1.37	0.86	0.588480
				8985	17,873,638 – 17,873,733	-	5	95	96.42	-1.32	0.87	0.576479
5610	2R_DroMel_CAF1	17,875,527 – 17,875,662	- - - - - - - - -	8986	17,875,527 – 17,875,624	+	5	97	96.49	-2.56	0.88	0.998535
				8987	17,875,527 – 17,875,624	-	5	97	96.49	-1.57	0.88	0.901861
				8988	17,875,544 – 17,875,662	+	5	120	87.79	-2.68	0.72	0.940516
5611	2R_DroMel_CAF1	17,875,774 – 17,876,009	- - - - - - - - -	8989	17,875,774 – 17,875,864	+	5	90	95.56	-1.43	0.84	0.619964
				8990	17,875,774 – 17,875,864	-	5	90	95.56	-1.67	0.94	0.988571
				8991	17,875,864 – 17,875,970	-	5	106	95.28	-1.15	0.91	0.604939
				8992	17,875,890 – 17,876,009	-	5	120	88.02	-1.88	0.73	0.713270
5612	2R_DroMel_CAF1	17,876,548 – 17,876,657	- - - - - - - - -	8993	17,876,548 – 17,876,657	+	5	120	80.45	-2.06	0.58	0.793981
5613	2R_DroMel_CAF1	17,878,123 – 17,878,219	- - - - - - - - -	8994	17,878,123 – 17,878,219	+	4	96	87.39	-1.51	0.86	0.664569
5614	2R_DroMel_CAF1	17,879,534 – 17,879,718	- - - - - - - - -	8995	17,879,534 – 17,879,647	+	5	113	97.17	-2.61	0.92	0.999540
				8996	17,879,534 – 17,879,647	-	5	113	97.17	-2.73	0.95	0.999856
				8997	17,879,568 – 17,879,684	+	5	119	96.08	-2.46	0.89	0.998977
				8998	17,879,568 – 17,879,684	-	5	119	96.08	-2.33	0.85	0.991802
				8999	17,879,607 – 17,879,718	+	5	114	95.19	-1.96	0.80	0.874026
				9000	17,879,607 – 17,879,718	-	5	114	95.19	-1.67	0.80	0.645495
5615	2R_DroMel_CAF1	17,880,431 – 17,880,538	- - - - - - - - -	9001	17,880,431 – 17,880,538	+	5	107	96.07	-1.55	0.94	0.975140
5615	2R_DroMel_CAF1	17,880,431 – 17,880,538	- - - - - - - - -	9002	17,880,431 – 17,880,538	-	5	107	96.07	-2.00	0.94	0.998441
5616	2R_DroMel_CAF1	17,880,726 – 17,880,910	- - - - - - - - -	9003	17,880,726 – 17,880,830	-	6	120	76.06	-2.36	0.50	0.956053
				9004	17,880,754 – 17,880,870	-	6	120	79.11	-2.12	0.76	0.945245
				9005	17,880,794 – 17,880,910	-	6	120	82.16	-1.85	0.78	0.785779
5617	2R_DroMel_CAF1	17,881,773 – 17,881,968	- - - - - - - - -	9006	17,881,773 – 17,881,888	+	5	120	96.75	-2.29	0.77	0.689712
5617	2R_DroMel_CAF1	17,881,773 – 17,881,968	- - - - - - - - -	9007	17,881,853 – 17,881,968	+	5	120	90.82	-3.33	0.70	0.891020
5618	2R_DroMel_CAF1	17,882,008 – 17,882,115	- - - - - - - - -	9008	17,882,008 – 17,882,115	-	5	120	91.98	-1.30	0.91	0.801195
5619	2R_DroMel_CAF1	17,883,853 – 17,883,952	- - - "knownCDS=Parent=FBtr0071820;Name=CG10955-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10955-RA" - - - - -	9009	17,883,853 – 17,883,952	-	6	107	72.19	-1.58	0.59	0.852547
5620	2R_DroMel_CAF1	17,885,216 – 17,885,318	- - - "knownCDS=Parent=FBtr0071820;Name=CG10955-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10955-RA" - - - - -	9010	17,885,216 – 17,885,318	-	6	112	76.41	-1.69	0.61	0.849323
5621	2R_DroMel_CAF1	17,891,949 – 17,892,047	- - - - - - - - -	9011	17,891,949 – 17,892,047	-	4	119	70.99	-3.66	0.26	0.621428
5622	2R_DroMel_CAF1	17,892,180 – 17,892,277	- - - - - - - - -	9012	17,892,180 – 17,892,277	-	5	103	76.95	-1.49	0.65	0.535110
5623	2R_DroMel_CAF1	17,893,039 – 17,893,136	- - - - - - - - -	9013	17,893,039 – 17,893,136	-	6	99	80.87	-1.25	0.69	0.518264
5624	2R_DroMel_CAF1	17,898,981 – 17,899,139	- - "RNAmicro=f:17899021_t:17899138_strand:+_p:0.995026" "knownCDS=Parent=FBtr0071822;Name=CG13506-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13506-RA" - - - - -	9014	17,898,981 – 17,899,099	-	6	118	78.47	-1.37	0.62	0.534315
				9015	17,899,021 – 17,899,139	+	6	118	83.05	-2.25	0.80	0.855319
				9016	17,899,021 – 17,899,139	-	6	118	83.05	-1.95	0.78	0.758555
5625	2R_DroMel_CAF1	17,900,164 – 17,900,284	- - - "knownCDS=Parent=FBtr0071822;Name=CG13506-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13506-RA" - - - - -	9017	17,900,164 – 17,900,258	+	6	104	81.58	-2.33	0.55	0.651123
5625	2R_DroMel_CAF1	17,900,164 – 17,900,284		9018	17,900,194 – 17,900,284	+	6	107	79.37	-1.33	0.63	0.509304
5626	2R_DroMel_CAF1	17,907,159 – 17,907,251	- - - - - - - - -	9019	17,907,159 – 17,907,251	+	6	103	81.80	-3.03	0.48	0.740206
5627	2R_DroMel_CAF1	17,917,247 – 17,917,343	- - - - - - - - -	9020	17,917,247 – 17,917,343	-	5	98	89.84	-1.73	0.74	0.604565
5628	2R_DroMel_CAF1	17,917,565 – 17,917,658	- - - - - - - - -	9021	17,917,565 – 17,917,658	+	6	102	86.52	-1.62	0.88	0.727336
5629	2R_DroMel_CAF1	17,920,741 – 17,920,849	- - - - - - - - -	9022	17,920,741 – 17,920,849	-	6	118	73.83	-1.13	0.72	0.849703
5630	2R_DroMel_CAF1	17,921,963 – 17,922,065	- - - "knownCDS=Parent=FBtr0071843;Name=qkr58E-1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3613-RA" - - - - -	9023	17,921,963 – 17,922,065	-	6	106	78.59	-1.66	0.62	0.738492
5631	2R_DroMel_CAF1	17,924,889 – 17,925,077	- - - "knownCDS=Parent=FBtr0071828;Name=qkr58E-2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5821-RA" - - - - -	9024	17,924,889 – 17,925,006	+	6	120	76.53	-2.05	0.46	0.691064
				9025	17,924,929 – 17,925,037	+	6	108	78.11	-2.07	0.50	0.718454
				9026	17,924,966 – 17,925,077	+	6	117	76.55	-1.50	0.57	0.510093
5632	2R_DroMel_CAF1	17,928,214 – 17,928,319	- - - - - - - - -	9027	17,928,214 – 17,928,319	-	3	120	79.11	-2.46	0.71	0.988336
5633	2R_DroMel_CAF1	17,932,091 – 17,932,211	- - - "knownCDS=Parent=FBtr0071829;Name=rad50-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6339-RA" - - - - -	9028	17,932,091 – 17,932,211	-	6	120	73.33	-1.60	0.53	0.633979
5634	2R_DroMel_CAF1	17,934,942 – 17,935,041	- - - - - - - - -	9029	17,934,942 – 17,935,041	+	6	107	76.00	-2.33	0.39	0.787437
5635	2R_DroMel_CAF1	17,936,547 – 17,936,641	- - - "knownCDS=Parent=FBtr0071830;Name=ppk12-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10972-RA" - - - - -	9030	17,936,547 – 17,936,641	+	6	94	88.09	-2.60	0.85	0.943597
5636	2R_DroMel_CAF1	17,939,157 – 17,939,260	- - - - - - - - -	9031	17,939,157 – 17,939,260	-	3	120	86.30	-1.43	0.86	0.505506
5637	2R_DroMel_CAF1	17,939,633 – 17,939,753	- - - - - - - - -	9032	17,939,633 – 17,939,753	-	3	120	78.87	-1.93	0.69	0.894736
5638	2R_DroMel_CAF1	17,939,993 – 17,940,289	- - - - - - - - -	9033	17,939,993 – 17,940,091	-	3	120	76.04	-1.95	0.62	0.924854
				9034	17,940,029 – 17,940,129	-	3	120	76.83	-2.57	0.51	0.730490
				9035	17,940,129 – 17,940,249	-	3	120	97.78	-1.57	0.95	0.569112
				9036	17,940,169 – 17,940,289	+	3	120	98.33	-1.58	0.94	0.529290
				9037	17,940,169 – 17,940,289	-	3	120	98.33	-2.00	0.94	0.806447
5639	2R_DroMel_CAF1	17,942,323 – 17,942,449	- - - - - - - - -	9038	17,942,323 – 17,942,413	-	3	120	78.82	-2.13	0.64	0.919441
				9039	17,942,352 – 17,942,449	+	3	120	83.04	-3.81	0.76	0.993253
				9040	17,942,352 – 17,942,449	-	3	120	83.04	-3.52	0.69	0.987348
5640	2R_DroMel_CAF1	17,944,194 – 17,944,292	- - - - - - - - -	9041	17,944,194 – 17,944,292	+	4	105	93.56	-1.90	0.86	0.829718
5640	2R_DroMel_CAF1	17,944,194 – 17,944,292	- - - - - - - - -	9042	17,944,194 – 17,944,292	-	4	105	93.56	-2.25	0.79	0.766236
5641	2R_DroMel_CAF1	17,944,527 – 17,944,618	- - - - - - - - -	9043	17,944,527 – 17,944,618	-	5	120	77.49	-1.90	0.41	0.593128
5642	2R_DroMel_CAF1	17,944,852 – 17,944,979	- - - - - - - - -	9044	17,944,852 – 17,944,943	+	4	92	97.27	-1.50	0.98	0.556743
5642	2R_DroMel_CAF1	17,944,852 – 17,944,979	- - - - - - - - -	9045	17,944,884 – 17,944,979	-	4	95	100.00	-1.85	1.00	0.558886
5643	2R_DroMel_CAF1	17,945,455 – 17,945,575	- - - - - - - - -	9046	17,945,455 – 17,945,575	+	4	120	100.00	-4.85	1.00	0.721668
5643	2R_DroMel_CAF1	17,945,455 – 17,945,575	- - - - - - - - -	9047	17,945,455 – 17,945,575	-	4	120	100.00	-4.01	1.00	0.872832
5644	2R_DroMel_CAF1	17,946,126 – 17,946,260	- - - - - - - - -	9048	17,946,126 – 17,946,220	+	5	120	65.32	-2.72	0.34	0.985526
5644	2R_DroMel_CAF1	17,946,126 – 17,946,260	- - - - - - - - -	9049	17,946,162 – 17,946,260	-	5	120	71.36	-1.65	0.25	0.523674
5645	2R_DroMel_CAF1	17,946,724 – 17,946,841	- - - - - - - - -	9050	17,946,724 – 17,946,841	+	4	118	86.89	-2.59	0.77	0.965955
5646	2R_DroMel_CAF1	17,947,943 – 17,948,165	- - - - - - - - -	9051	17,947,943 – 17,948,063	-	5	120	86.93	-1.85	0.74	0.728977
5646	2R_DroMel_CAF1	17,947,943 – 17,948,165	- - - - - - - - -	9052	17,948,063 – 17,948,165	-	5	120	83.30	-1.75	0.67	0.604698
5647	2R_DroMel_CAF1	17,948,414 – 17,948,522	- - - - - - - - -	9053	17,948,414 – 17,948,522	-	6	120	83.39	-2.26	0.67	0.640843
5648	2R_DroMel_CAF1	17,951,446 – 17,951,551	- - - - - - - - -	9054	17,951,446 – 17,951,551	-	4	106	89.10	-2.00	0.76	0.820758
5649	2R_DroMel_CAF1	17,953,156 – 17,953,309	- - - - - - - - -	9055	17,953,156 – 17,953,271	-	4	120	96.60	-1.52	0.96	0.609962
5649	2R_DroMel_CAF1	17,953,156 – 17,953,309	- - - - - - - - -	9056	17,953,191 – 17,953,309	+	4	118	95.20	-2.17	0.93	0.951326
5650	2R_DroMel_CAF1	17,953,518 – 17,953,638	- - - - - - - - -	9057	17,953,518 – 17,953,638	+	4	120	91.11	-1.53	0.80	0.586535
5651	2R_DroMel_CAF1	17,954,456 – 17,954,599	- - - - - - - - -	9058	17,954,456 – 17,954,559	+	4	107	91.11	-2.13	0.83	0.918242
				9059	17,954,483 – 17,954,599	+	4	120	94.35	-2.43	0.83	0.881732
				9060	17,954,483 – 17,954,599	-	4	120	94.35	-1.60	0.86	0.614712
5652	2R_DroMel_CAF1	17,954,719 – 17,954,879	- - - - - - - - -	9061	17,954,719 – 17,954,839	-	4	120	97.78	-2.10	0.93	0.849124
5652	2R_DroMel_CAF1	17,954,719 – 17,954,879	- - - - - - - - -	9062	17,954,759 – 17,954,879	-	4	120	98.61	-2.33	1.00	0.924065
5653	2R_DroMel_CAF1	17,956,445 – 17,956,565	- - - - - - - - -	9063	17,956,445 – 17,956,565	+	4	120	97.36	-1.55	0.93	0.500000
5654	2R_DroMel_CAF1	17,956,641 – 17,956,755	- - - - - - - - -	9064	17,956,641 – 17,956,755	+	4	119	91.05	-1.56	0.75	0.500000
5655	2R_DroMel_CAF1	17,957,446 – 17,957,551	- - - - - - - - -	9065	17,957,446 – 17,957,551	-	5	105	95.23	-2.59	0.85	0.997283
5656	2R_DroMel_CAF1	17,957,995 – 17,958,103	- - - - - - - - -	9066	17,957,995 – 17,958,103	+	4	117	72.17	-1.99	0.45	0.500000
5657	2R_DroMel_CAF1	17,958,789 – 17,958,883	- - - - - - - - -	9067	17,958,789 – 17,958,883	+	5	111	73.71	-1.70	0.24	0.677076
5658	2R_DroMel_CAF1	17,960,146 – 17,960,255	- - - - - - - - -	9068	17,960,146 – 17,960,255	-	5	111	98.18	-1.44	0.94	0.875699
5659	2R_DroMel_CAF1	17,964,059 – 17,964,156	- - - - - - - - -	9069	17,964,059 – 17,964,156	+	5	120	88.70	-1.48	0.78	0.565719
5659	2R_DroMel_CAF1	17,964,059 – 17,964,156	- - - - - - - - -	9070	17,964,059 – 17,964,156	-	5	120	88.70	-2.12	0.85	0.984660
5660	2R_DroMel_CAF1	17,964,757 – 17,964,849	- - - - - - - - -	9071	17,964,757 – 17,964,849	+	6	92	81.30	-2.61	0.52	0.749586
5661	2R_DroMel_CAF1	17,969,015 – 17,969,124	- - - - - - - - -	9072	17,969,015 – 17,969,124	-	4	109	94.80	-1.44	0.89	0.518558
5662	2R_DroMel_CAF1	17,969,271 – 17,969,364	- - - - - - - - -	9073	17,969,271 – 17,969,364	-	6	119	85.31	-1.48	0.86	0.580940
5663	2R_DroMel_CAF1	17,969,401 – 17,969,493	- - - - - - - - -	9074	17,969,401 – 17,969,493	-	5	94	93.32	-1.77	0.79	0.812034
5664	2R_DroMel_CAF1	17,970,122 – 17,970,214	- - - - - - - - -	9075	17,970,122 – 17,970,214	+	5	96	95.83	-1.44	0.91	0.896871
5665	2R_DroMel_CAF1	17,971,622 – 17,971,722	- - - - - - - - -	9076	17,971,622 – 17,971,722	+	5	119	71.57	-2.51	0.56	0.997896
5665	2R_DroMel_CAF1	17,971,622 – 17,971,722	- - - - - - - - -	9077	17,971,622 – 17,971,722	-	5	119	71.57	-2.14	0.46	0.969831
5666	2R_DroMel_CAF1	17,974,644 – 17,974,749	- - - - - - - - -	9078	17,974,644 – 17,974,749	+	5	111	90.97	-2.26	0.74	0.854491
5667	2R_DroMel_CAF1	17,975,087 – 17,975,189	- - - - - - - - -	9079	17,975,087 – 17,975,189	+	6	107	79.61	-2.19	0.56	0.822603
5668	2R_DroMel_CAF1	17,981,582 – 17,981,682	- - - - - - - - -	9080	17,981,582 – 17,981,682	+	6	110	79.65	-1.90	0.71	0.893237
5668	2R_DroMel_CAF1	17,981,582 – 17,981,682	- - - - - - - - -	9081	17,981,582 – 17,981,682	-	6	110	79.65	-2.64	0.63	0.952526
5669	2R_DroMel_CAF1	17,983,471 – 17,983,571	- - - "knownCDS=Parent=FBtr0071839;Name=CG3701-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3701-RA" - - - - -	9082	17,983,471 – 17,983,571	-	6	109	74.63	-1.75	0.48	0.546875
5670	2R_DroMel_CAF1	17,998,928 – 17,999,032	- - - "knownCDS=Parent=FBtr0071833;Name=CG4554-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4554-RA" - - - - -	9083	17,998,928 – 17,999,032	+	6	104	80.00	-1.61	0.73	0.814358
5671	2R_DroMel_CAF1	18,004,470 – 18,004,563	- - - "knownCDS=Parent=FBtr0071838;Name=px-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4444-RA" - - - - -	9084	18,004,470 – 18,004,563	+	6	99	89.26	-1.59	0.86	0.654195
5671	2R_DroMel_CAF1	18,004,470 – 18,004,563		9085	18,004,470 – 18,004,563	-	6	99	89.26	-3.11	0.88	0.995016
5672	2R_DroMel_CAF1	18,005,177 – 18,005,287	- - - "knownCDS=Parent=FBtr0071838;Name=px-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4444-RA" - - - - -	9086	18,005,177 – 18,005,287	-	6	120	76.58	-1.69	0.56	0.712326
5673	2R_DroMel_CAF1	18,006,925 – 18,007,033	- - - "knownCDS=Parent=FBtr0071838;Name=px-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4444-RA" - - - - -	9087	18,006,925 – 18,007,033	-	6	120	74.62	-2.21	0.39	0.804632
5674	2R_DroMel_CAF1	18,008,308 – 18,008,427	- - - - - - - - -	9088	18,008,308 – 18,008,427	+	5	120	97.49	-1.47	0.91	0.854528
5674	2R_DroMel_CAF1	18,008,308 – 18,008,427	- - - - - - - - -	9089	18,008,308 – 18,008,427	-	5	120	97.49	-1.38	0.90	0.761479
5675	2R_DroMel_CAF1	18,009,314 – 18,009,417	- - - - - - - - -	9090	18,009,314 – 18,009,417	-	5	111	89.32	-1.65	0.82	0.829032
5676	2R_DroMel_CAF1	18,010,645 – 18,010,741	- - - - - - - - -	9091	18,010,645 – 18,010,741	+	5	96	86.47	-2.32	0.74	0.920554
5676	2R_DroMel_CAF1	18,010,645 – 18,010,741	- - - - - - - - -	9092	18,010,645 – 18,010,741	-	5	96	86.47	-2.12	0.77	0.903316
5677	2R_DroMel_CAF1	18,011,201 – 18,011,301	- - - - - - - - -	9093	18,011,201 – 18,011,301	-	6	119	74.31	-1.05	0.67	0.609798
5678	2R_DroMel_CAF1	18,013,957 – 18,014,052	- - - - - - - - -	9094	18,013,957 – 18,014,052	+	5	103	93.69	-1.80	0.81	0.886817
5679	2R_DroMel_CAF1	18,015,051 – 18,015,157	- - - - - - - - -	9095	18,015,051 – 18,015,157	-	5	111	97.00	-1.29	0.99	0.896118
5680	2R_DroMel_CAF1	18,016,553 – 18,016,659	- - - - - - - - -	9096	18,016,553 – 18,016,659	+	5	106	96.98	-1.76	0.93	0.985972
5680	2R_DroMel_CAF1	18,016,553 – 18,016,659	- - - - - - - - -	9097	18,016,553 – 18,016,659	-	5	106	96.98	-1.84	0.90	0.982613
5681	2R_DroMel_CAF1	18,017,718 – 18,017,812	- - - - - - - - -	9098	18,017,718 – 18,017,812	-	6	107	90.78	-1.64	0.86	0.715754
5682	2R_DroMel_CAF1	18,021,024 – 18,021,143	- - - - - - - - -	9099	18,021,024 – 18,021,143	-	5	119	99.66	-1.20	1.00	0.500000
5683	2R_DroMel_CAF1	18,021,344 – 18,021,449	- - - - - - - - -	9100	18,021,344 – 18,021,449	+	6	111	94.70	-1.49	0.87	0.677953
5683	2R_DroMel_CAF1	18,021,344 – 18,021,449	- - - - - - - - -	9101	18,021,344 – 18,021,449	-	6	111	94.70	-2.17	0.92	0.997718
5684	2R_DroMel_CAF1	18,022,990 – 18,023,085	- - - - - - - - -	9102	18,022,990 – 18,023,085	+	5	95	92.84	-1.70	0.94	0.992283
5684	2R_DroMel_CAF1	18,022,990 – 18,023,085	- - - - - - - - -	9103	18,022,990 – 18,023,085	-	5	95	92.84	-1.94	0.76	0.762702
5685	2R_DroMel_CAF1	18,023,257 – 18,023,356	- - - - - - - - -	9104	18,023,257 – 18,023,356	+	5	108	91.32	-2.30	0.75	0.896198
5685	2R_DroMel_CAF1	18,023,257 – 18,023,356	- - - - - - - - -	9105	18,023,257 – 18,023,356	-	5	108	91.32	-2.30	0.72	0.729296
5686	2R_DroMel_CAF1	18,023,414 – 18,023,506	- - - - - - - - -	9106	18,023,414 – 18,023,506	+	6	104	82.71	-1.99	0.70	0.697161
5687	2R_DroMel_CAF1	18,023,581 – 18,023,690	- - - - - - - - -	9107	18,023,581 – 18,023,690	+	3	119	76.23	-1.33	0.68	0.510383
5688	2R_DroMel_CAF1	18,024,425 – 18,024,528	- - - - - - - - -	9108	18,024,425 – 18,024,528	+	5	103	96.31	-1.62	0.87	0.898541
5689	2R_DroMel_CAF1	18,026,020 – 18,026,121	- - - - - - - - -	9109	18,026,020 – 18,026,121	+	5	108	90.17	-2.14	0.73	0.772217
5690	2R_DroMel_CAF1	18,027,174 – 18,027,277	- - - - - - - - -	9110	18,027,174 – 18,027,277	-	5	103	89.03	-2.59	0.79	0.986187
5691	2R_DroMel_CAF1	18,031,053 – 18,031,170	- - - - - - - - -	9111	18,031,053 – 18,031,170	+	6	120	97.74	-1.20	0.99	0.983570
5692	2R_DroMel_CAF1	18,032,683 – 18,032,783	- - - - - - - - -	9112	18,032,683 – 18,032,783	+	6	102	97.32	-1.85	0.98	0.999381
5692	2R_DroMel_CAF1	18,032,683 – 18,032,783	- - - - - - - - -	9113	18,032,683 – 18,032,783	-	6	102	97.32	-3.04	0.91	0.999731
5693	2R_DroMel_CAF1	18,037,412 – 18,037,572	- - - - - - - - -	9114	18,037,412 – 18,037,515	+	5	119	77.13	-1.57	0.62	0.519164
				9115	18,037,436 – 18,037,551	+	5	115	94.70	-1.60	0.80	0.630507
				9116	18,037,436 – 18,037,551	-	5	115	94.70	-2.29	0.87	0.997205
				9117	18,037,476 – 18,037,572	+	5	96	96.67	-2.23	0.82	0.943102
				9118	18,037,476 – 18,037,572	-	5	96	96.67	-1.66	0.91	0.962107
5694	2R_DroMel_CAF1	18,039,996 – 18,040,092	- - - - - - - - -	9119	18,039,996 – 18,040,092	-	5	104	87.37	-2.12	0.65	0.561852
5695	2R_DroMel_CAF1	18,040,456 – 18,040,547	- - - - - - - - -	9120	18,040,456 – 18,040,547	+	5	116	74.59	-1.89	0.45	0.765781
5696	2R_DroMel_CAF1	18,042,264 – 18,042,377	- - - - - - - - -	9121	18,042,264 – 18,042,377	+	6	120	79.04	-1.46	0.75	0.823395
5696	2R_DroMel_CAF1	18,042,264 – 18,042,377	- - - - - - - - -	9122	18,042,264 – 18,042,377	-	6	120	79.04	-1.30	0.64	0.543223
5697	2R_DroMel_CAF1	18,042,535 – 18,042,741	- - - "knownCDS=Parent=FBtr0071838;Name=px-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4444-RA" - - - - -	9123	18,042,535 – 18,042,638	+	6	108	78.71	-1.23	0.68	0.602363
				9124	18,042,638 – 18,042,741	+	6	120	75.81	-1.01	0.71	0.655671
				9125	18,042,638 – 18,042,741	-	6	120	75.81	-0.98	0.72	0.656487
5698	2R_DroMel_CAF1	18,046,844 – 18,046,978	- - - - - - - - -	9126	18,046,844 – 18,046,949	+	4	106	93.27	-1.44	0.92	0.645904
5698	2R_DroMel_CAF1	18,046,844 – 18,046,978	- - - - - - - - -	9127	18,046,882 – 18,046,978	+	5	99	98.35	-1.85	1.00	0.995324
5699	2R_DroMel_CAF1	18,053,669 – 18,053,768	- - - - - - - - -	9128	18,053,669 – 18,053,768	+	4	99	87.89	-1.41	0.91	0.657486
5700	2R_DroMel_CAF1	18,055,885 – 18,055,979	- - - - - - - - -	9129	18,055,885 – 18,055,979	-	6	97	77.97	-2.45	0.52	0.935645
5701	2R_DroMel_CAF1	18,058,613 – 18,058,733	- - - "knownCDS=Parent=FBtr0071835;Name=CG6018-cds, ;Dbxref=FlyBase+Annotation+IDs:CG6018-RA" - - - - -	9130	18,058,613 – 18,058,733	+	6	120	74.78	-2.02	0.39	0.554568
5702	2R_DroMel_CAF1	18,061,039 – 18,061,139	- - - - - - - - -	9131	18,061,039 – 18,061,139	-	5	100	87.37	-1.77	0.87	0.910030
5703	2R_DroMel_CAF1	18,062,521 – 18,062,616	- - - - - - - - -	9132	18,062,521 – 18,062,616	+	4	95	79.08	-2.12	0.64	0.921029
5703	2R_DroMel_CAF1	18,062,521 – 18,062,616	- - - - - - - - -	9133	18,062,521 – 18,062,616	-	4	95	79.08	-2.61	0.53	0.920272
5704	2R_DroMel_CAF1	18,063,253 – 18,063,360	- - - "knownCDS=Parent=FBtr0071838;Name=px-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4444-RA" - - - - -	9134	18,063,253 – 18,063,360	-	6	109	78.63	-2.02	0.58	0.842363
5705	2R_DroMel_CAF1	18,064,201 – 18,064,302	- - - "knownCDS=Parent=FBtr0071838;Name=px-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4444-RA" - - - - -	9135	18,064,201 – 18,064,302	+	6	101	78.68	-1.17	0.73	0.670875
5706	2R_DroMel_CAF1	18,064,872 – 18,064,969	- - - - - - - - -	9136	18,064,872 – 18,064,969	+	4	97	84.97	-1.66	0.70	0.641710
5706	2R_DroMel_CAF1	18,064,872 – 18,064,969	- - - - - - - - -	9137	18,064,872 – 18,064,969	-	4	97	84.97	-2.14	0.80	0.929085
5707	2R_DroMel_CAF1	18,069,581 – 18,069,710	- - - - - - - - -	9138	18,069,581 – 18,069,673	-	5	93	91.45	-2.59	0.72	0.847135
5707	2R_DroMel_CAF1	18,069,581 – 18,069,710	- - - - - - - - -	9139	18,069,594 – 18,069,710	-	5	117	87.71	-1.97	0.76	0.839083
5708	2R_DroMel_CAF1	18,071,677 – 18,071,868	- - - "knownCDS=Parent=FBtr0071837;Name=Dnr1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12489-RA" - - - - -	9140	18,071,677 – 18,071,776	-	6	105	79.67	-2.38	0.50	0.768192
				9141	18,071,776 – 18,071,868	+	6	92	65.10	-1.54	0.48	0.762660
				9142	18,071,776 – 18,071,868	-	6	92	65.10	-1.59	0.44	0.711849
5709	2R_DroMel_CAF1	18,072,091 – 18,072,211	- - "RNAmicro=f:18072091_t:18072210_strand:+_p:0.694094" "knownCDS=Parent=FBtr0071837;Name=Dnr1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12489-RA" - - - - -	9143	18,072,091 – 18,072,211	-	6	120	89.22	-2.29	0.84	0.882050
5710	2R_DroMel_CAF1	18,082,239 – 18,082,369	- - - - - - - - -	9144	18,082,239 – 18,082,342	+	5	106	62.19	-2.48	0.31	0.800245
				9145	18,082,239 – 18,082,342	-	5	106	62.19	-2.43	0.54	0.993993
				9146	18,082,276 – 18,082,369	-	5	95	74.40	-1.86	0.59	0.895210
5711	2R_DroMel_CAF1	18,082,883 – 18,082,988	- - - - - - - - -	9147	18,082,883 – 18,082,988	+	6	106	78.71	-1.69	0.65	0.813838
5711	2R_DroMel_CAF1	18,082,883 – 18,082,988	- - - - - - - - -	9148	18,082,883 – 18,082,988	-	6	106	78.71	-1.93	0.65	0.896222
5712	2R_DroMel_CAF1	18,097,056 – 18,097,147	- - - - - - - - -	9149	18,097,056 – 18,097,147	-	5	101	87.10	-2.12	0.72	0.810144
5713	2R_DroMel_CAF1	18,100,604 – 18,100,709	- - - - - - - - -	9150	18,100,604 – 18,100,709	+	5	118	69.45	-1.75	0.18	0.508704
5713	2R_DroMel_CAF1	18,100,604 – 18,100,709	- - - - - - - - -	9151	18,100,604 – 18,100,709	-	5	118	69.45	-1.87	0.26	0.712348
5714	2R_DroMel_CAF1	18,103,120 – 18,103,235	- - - - - - - - -	9152	18,103,120 – 18,103,235	-	3	120	89.30	-2.90	0.74	0.806287
5715	2R_DroMel_CAF1	18,103,315 – 18,103,432	- - - - - - - - -	9153	18,103,315 – 18,103,432	-	3	120	78.76	-0.95	0.85	0.609640
5716	2R_DroMel_CAF1	18,104,872 – 18,104,980	- - - - - - - - -	9154	18,104,872 – 18,104,980	-	6	113	78.44	-2.33	0.57	0.933735
5717	2R_DroMel_CAF1	18,113,899 – 18,114,027	- - - - - - - - -	9155	18,113,899 – 18,114,002	+	6	108	79.22	-1.63	0.68	0.815507
5717	2R_DroMel_CAF1	18,113,899 – 18,114,027	- - - - - - - - -	9156	18,113,935 – 18,114,027	+	6	97	77.78	-1.29	0.64	0.556251
5718	2R_DroMel_CAF1	18,115,276 – 18,115,382	- - - - - - - - -	9157	18,115,276 – 18,115,382	-	6	117	79.33	-1.07	0.74	0.577790
5719	2R_DroMel_CAF1	18,116,125 – 18,116,225	- - - "knownCDS=Parent=FBtr0071856;Name=CG4071-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4071-RA" - - - - -	9158	18,116,125 – 18,116,225	+	6	118	81.82	-1.59	0.74	0.688937
5719	2R_DroMel_CAF1	18,116,125 – 18,116,225		9159	18,116,125 – 18,116,225	-	6	118	81.82	-1.61	0.75	0.708377
5720	2R_DroMel_CAF1	18,119,573 – 18,119,693	- - - "knownCDS=Parent=FBtr0071940;Name=CG4329-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4329-RA" - - - - -	9160	18,119,573 – 18,119,693	+	6	120	77.28	-1.96	0.50	0.700803
5721	2R_DroMel_CAF1	18,124,185 – 18,124,295	- - - - - - - - -	9161	18,124,185 – 18,124,295	+	5	111	86.49	-3.10	0.66	0.927879
5721	2R_DroMel_CAF1	18,124,185 – 18,124,295	- - - - - - - - -	9162	18,124,185 – 18,124,295	-	5	111	86.49	-4.46	0.71	0.996019
5722	2R_DroMel_CAF1	18,133,149 – 18,133,242	- - - - - - - - -	9163	18,133,149 – 18,133,242	-	6	120	72.15	-2.54	0.41	0.987142
5723	2R_DroMel_CAF1	18,137,292 – 18,137,392	- - - - - - - - -	9164	18,137,292 – 18,137,392	+	6	101	78.61	-1.04	0.73	0.599109
5724	2R_DroMel_CAF1	18,143,002 – 18,143,111	- - - "knownCDS=Parent=FBtr0071938;Name=CG17807-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17807-RA" - - - - -	9165	18,143,002 – 18,143,111	-	6	109	78.51	-2.14	0.46	0.571619
5725	2R_DroMel_CAF1	18,145,245 – 18,145,338	- - - - - - - - -	9166	18,145,245 – 18,145,338	+	6	103	75.50	-2.55	0.55	0.988475
5726	2R_DroMel_CAF1	18,151,572 – 18,151,839	- - - - - - - - -	9167	18,151,572 – 18,151,666	-	5	120	74.46	-1.81	0.39	0.648376
				9168	18,151,606 – 18,151,706	+	5	120	77.49	-1.89	0.41	0.584738
				9169	18,151,606 – 18,151,706	-	5	120	77.49	-1.95	0.45	0.686699
				9170	18,151,706 – 18,151,799	-	5	120	70.38	-2.10	0.27	0.935343
				9171	18,151,737 – 18,151,839	-	5	120	67.38	-2.39	0.35	0.977631
5727	2R_DroMel_CAF1	18,152,226 – 18,152,343	- - - - - - - - -	9172	18,152,226 – 18,152,343	+	5	120	72.70	-2.18	0.41	0.971046
5728	2R_DroMel_CAF1	18,153,338 – 18,153,451	- - - - - - - - -	9173	18,153,338 – 18,153,451	+	5	113	88.94	-1.85	0.87	0.963651
5728	2R_DroMel_CAF1	18,153,338 – 18,153,451	- - - - - - - - -	9174	18,153,338 – 18,153,451	-	5	113	88.94	-2.60	0.89	0.999216
5729	2R_DroMel_CAF1	18,153,984 – 18,154,077	- - - - - - - - -	9175	18,153,984 – 18,154,077	+	5	112	71.85	-2.22	0.37	0.977272
5730	2R_DroMel_CAF1	18,159,014 – 18,159,129	- - - - - - - - -	9176	18,159,014 – 18,159,129	+	3	120	85.35	-2.40	0.72	0.803183
5730	2R_DroMel_CAF1	18,159,014 – 18,159,129	- - - - - - - - -	9177	18,159,014 – 18,159,129	-	3	120	85.35	-2.89	0.68	0.890353
5731	2R_DroMel_CAF1	18,161,444 – 18,161,534	- - - "knownCDS=Parent=FBtr0071928;Name=Cyp6d2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4373-RA" - - - - -	9178	18,161,444 – 18,161,534	+	6	100	80.57	-1.94	0.60	0.700192
5732	2R_DroMel_CAF1	18,162,738 – 18,162,855	- - - "knownCDS=Parent=FBtr0071927;Name=CG30196-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30196-RA" - - - - -	9179	18,162,738 – 18,162,855	+	6	120	79.25	-1.14	0.68	0.517149
5733	2R_DroMel_CAF1	18,163,356 – 18,163,466	- - - - - - - - -	9180	18,163,356 – 18,163,466	-	6	110	78.12	-1.86	0.70	0.930589
5734	2R_DroMel_CAF1	18,167,377 – 18,167,497	- - - "knownCDS=Parent=FBtr0071863;Name=CG13511-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13511-RA" - - - - -	9181	18,167,377 – 18,167,497	+	6	120	74.78	-1.94	0.53	0.881269
5735	2R_DroMel_CAF1	18,174,929 – 18,175,024	- - - - - - - - -	9182	18,174,929 – 18,175,024	-	6	112	74.89	-1.42	0.68	0.877620
5736	2R_DroMel_CAF1	18,177,372 – 18,177,462	- - - "knownCDS=texon1757;Parent=CG_NCBI_GNO_32629474, CG_RGUI_GID_mRNA_40004273, CG_DGIL_SNO_28357955, CG_BATZ_CON_47005065" - - - - -	9183	18,177,372 – 18,177,462	-	6	93	81.17	-2.32	0.57	0.742155
5737	2R_DroMel_CAF1	18,178,890 – 18,179,063	- - - - - - - - -	9184	18,178,890 – 18,178,994	+	4	117	80.39	-2.40	0.57	0.879709
5737	2R_DroMel_CAF1	18,178,890 – 18,179,063	- - - - - - - - -	9185	18,178,961 – 18,179,063	-	4	119	71.26	-2.13	0.42	0.500000
5738	2R_DroMel_CAF1	18,187,736 – 18,187,837	- - - - - - - - -	9186	18,187,736 – 18,187,837	-	6	106	79.30	-1.19	0.68	0.550480
5739	2R_DroMel_CAF1	18,187,931 – 18,188,032	- - - - - - - - -	9187	18,187,931 – 18,188,032	-	6	101	92.92	-2.32	0.87	0.973959
5740	2R_DroMel_CAF1	18,189,479 – 18,189,656	- - - - - - - - -	9188	18,189,479 – 18,189,582	-	5	112	89.71	-2.07	0.74	0.816889
				9189	18,189,510 – 18,189,621	+	5	112	94.61	-1.55	0.83	0.788145
				9190	18,189,510 – 18,189,621	-	5	112	94.61	-1.87	0.85	0.971613
				9191	18,189,545 – 18,189,656	+	5	112	95.33	-1.65	0.91	0.975028
				9192	18,189,545 – 18,189,656	-	5	112	95.33	-1.28	0.92	0.809097
5741	2R_DroMel_CAF1	18,190,820 – 18,190,921	- - - - - - - - -	9193	18,190,820 – 18,190,921	+	6	110	80.32	-1.83	0.59	0.638755
5742	2R_DroMel_CAF1	18,192,326 – 18,192,420	- - - - - - - - -	9194	18,192,326 – 18,192,420	+	5	101	94.32	-1.72	0.92	0.988929
5742	2R_DroMel_CAF1	18,192,326 – 18,192,420	- - - - - - - - -	9195	18,192,326 – 18,192,420	-	5	101	94.32	-1.89	0.91	0.995006
5743	2R_DroMel_CAF1	18,194,062 – 18,194,202	- - "RNAmicro=f:18194062_t:18194179_strand:+_p:0.597212" - - - - - -	9196	18,194,062 – 18,194,162	+	5	118	82.54	-3.18	0.77	0.997223
				9197	18,194,062 – 18,194,162	-	5	118	82.54	-3.26	0.86	0.998915
				9198	18,194,086 – 18,194,202	+	5	118	86.11	-1.89	0.78	0.831628
5744	2R_DroMel_CAF1	18,196,172 – 18,196,265	- - - "knownCDS=Parent=FBtr0071924;Name=ppa-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9952-RA" - - - - -	9199	18,196,172 – 18,196,265	-	6	111	79.08	-2.06	0.61	0.882003
5745	2R_DroMel_CAF1	18,197,394 – 18,197,497	- - - - - - - - -	9200	18,197,394 – 18,197,497	-	6	114	78.75	-1.64	0.67	0.831589
5746	2R_DroMel_CAF1	18,198,682 – 18,198,816	- - - - - - - - -	9201	18,198,682 – 18,198,780	-	6	107	81.12	-1.39	0.71	0.617831
5746	2R_DroMel_CAF1	18,198,682 – 18,198,816	- - - - - - - - -	9202	18,198,713 – 18,198,816	+	6	103	81.17	-2.00	0.72	0.844998
5747	2R_DroMel_CAF1	18,200,682 – 18,200,774	- - - - - - - - -	9203	18,200,682 – 18,200,774	+	5	100	80.04	-2.62	0.55	0.972363
5747	2R_DroMel_CAF1	18,200,682 – 18,200,774	- - - - - - - - -	9204	18,200,682 – 18,200,774	-	5	100	80.04	-2.74	0.68	0.992439
5748	2R_DroMel_CAF1	18,201,904 – 18,202,036	- - "RNAmicro=f:18201904_t:18202022_strand:-_p:0.998188" - - - - - -	9205	18,201,904 – 18,202,007	+	4	119	85.01	-4.03	0.74	0.995182
				9206	18,201,904 – 18,202,007	-	4	119	85.01	-2.74	0.70	0.963674
				9207	18,201,944 – 18,202,036	+	3	108	87.04	-2.80	0.80	0.918793
				9208	18,201,944 – 18,202,036	-	3	108	87.04	-3.33	0.73	0.931731
5749	2R_DroMel_CAF1	18,204,711 – 18,204,819	- - - - - - - - -	9209	18,204,711 – 18,204,819	-	6	112	80.31	-1.81	0.78	0.874481
5750	2R_DroMel_CAF1	18,207,181 – 18,207,274	- - - "knownCDS=Parent=FBtr0071922;Name=robo-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13521-RA" - - - - -	9210	18,207,181 – 18,207,274	+	6	109	77.93	-1.26	0.69	0.713213
5750	2R_DroMel_CAF1	18,207,181 – 18,207,274		9211	18,207,181 – 18,207,274	-	6	109	77.93	-1.33	0.64	0.616209
5751	2R_DroMel_CAF1	18,209,266 – 18,209,386	- - - "knownCDS=Parent=FBtr0071921;Name=CG30259-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30259-RA" - - - - -	9212	18,209,266 – 18,209,386	+	6	120	78.22	-1.55	0.61	0.655237
5751	2R_DroMel_CAF1	18,209,266 – 18,209,386		9213	18,209,266 – 18,209,386	-	6	120	78.22	-2.34	0.54	0.921520
5752	2R_DroMel_CAF1	18,210,040 – 18,210,159	- - - - - - - - -	9214	18,210,040 – 18,210,159	+	4	119	86.50	-1.56	0.80	0.646463
5752	2R_DroMel_CAF1	18,210,040 – 18,210,159	- - - - - - - - -	9215	18,210,040 – 18,210,159	-	4	119	86.50	-1.53	0.66	0.500000
5753	2R_DroMel_CAF1	18,210,299 – 18,210,418	- - - "knownCDS=Parent=FBtr0071869;Name=Obp59a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13517-RA" - - - - -	9216	18,210,299 – 18,210,418	+	6	119	77.77	-1.71	0.53	0.500000
5753	2R_DroMel_CAF1	18,210,299 – 18,210,418		9217	18,210,299 – 18,210,418	-	6	119	77.77	-1.90	0.58	0.825395
5754	2R_DroMel_CAF1	18,213,518 – 18,213,634	- - - "knownCDS=Parent=FBtr0071920;Name=Obp58c-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13524-RA" - - - - -	9218	18,213,518 – 18,213,634	-	6	116	81.61	-1.44	0.75	0.640496
5755	2R_DroMel_CAF1	18,216,127 – 18,216,224	- - - - - - - - -	9219	18,216,127 – 18,216,224	+	3	103	79.79	-1.64	0.75	0.752736
5755	2R_DroMel_CAF1	18,216,127 – 18,216,224	- - - - - - - - -	9220	18,216,127 – 18,216,224	-	3	103	79.79	-1.06	0.93	0.946301
5756	2R_DroMel_CAF1	18,217,445 – 18,217,549	- - - "knownCDS=Parent=FBtr0071873, FBtr0071874;Name=CG30275-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30275-RA, FlyBase+Annotation+IDs:CG30275-RC" - - - - -	9221	18,217,445 – 18,217,549	+	6	118	78.47	-1.24	0.65	0.534786
5757	2R_DroMel_CAF1	18,219,030 – 18,219,144	- - - "knownCDS=Parent=FBtr0071876;Name=CG30275-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30275-RD" - - - - -	9222	18,219,030 – 18,219,144	+	6	115	75.34	-2.15	0.40	0.707990
5758	2R_DroMel_CAF1	18,231,990 – 18,232,103	- - - - - - - - -	9223	18,231,990 – 18,232,103	-	4	120	79.89	-2.31	0.61	0.922998
5759	2R_DroMel_CAF1	18,232,833 – 18,233,033	- - - "knownCDS=Parent=FBtr0071918;Name=jbug-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30092-RB" - - - - -	9224	18,232,833 – 18,232,953	+	6	120	91.78	-2.48	0.82	0.873510
				9225	18,232,833 – 18,232,953	-	6	120	91.78	-2.62	0.89	0.996192
				9226	18,232,873 – 18,232,993	+	6	120	91.50	-2.21	0.85	0.900549
				9227	18,232,873 – 18,232,993	-	6	120	91.50	-2.76	0.86	0.985064
				9228	18,232,913 – 18,233,033	+	6	120	93.83	-2.99	0.92	0.999760
				9229	18,232,913 – 18,233,033	-	6	120	93.83	-3.75	0.94	0.999971
5760	2R_DroMel_CAF1	18,240,530 – 18,240,647	- - - - - - - - -	9230	18,240,530 – 18,240,647	-	6	117	83.26	-1.96	0.68	0.596251
5761	2R_DroMel_CAF1	18,242,099 – 18,242,205	- - - - - - - - -	9231	18,242,099 – 18,242,205	+	4	114	89.39	-1.73	0.75	0.682405
5762	2R_DroMel_CAF1	18,258,358 – 18,258,448	- - - - - - - - -	9232	18,258,358 – 18,258,448	+	3	90	86.30	-2.34	0.70	0.689177
5763	2R_DroMel_CAF1	18,263,214 – 18,263,319	- - - "knownCDS=Parent=FBtr0071878;Name=CG13526-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13526-RA" - - - - -	9233	18,263,214 – 18,263,319	+	6	105	84.19	-1.96	0.75	0.615030
5764	2R_DroMel_CAF1	18,268,426 – 18,268,522	- - - - - - - - -	9234	18,268,426 – 18,268,522	-	4	99	90.52	-1.34	0.96	0.688992
5765	2R_DroMel_CAF1	18,271,534 – 18,271,669	- - - - - - - - -	9235	18,271,534 – 18,271,643	+	6	117	78.57	-2.26	0.60	0.932939
5765	2R_DroMel_CAF1	18,271,534 – 18,271,669	- - - - - - - - -	9236	18,271,574 – 18,271,669	+	6	105	70.78	-2.16	0.52	0.981606
5766	2R_DroMel_CAF1	18,280,422 – 18,280,513	- - - - - - - - -	9237	18,280,422 – 18,280,513	+	5	97	81.56	-2.95	0.70	0.993715
5766	2R_DroMel_CAF1	18,280,422 – 18,280,513	- - - - - - - - -	9238	18,280,422 – 18,280,513	-	5	97	81.56	-2.15	0.65	0.873235
5767	2R_DroMel_CAF1	18,281,732 – 18,281,834	- - - - - - - - -	9239	18,281,732 – 18,281,834	-	6	104	79.31	-1.54	0.63	0.642305
5768	2R_DroMel_CAF1	18,289,685 – 18,289,806	- - - - - - - - -	9240	18,289,685 – 18,289,785	-	5	104	90.26	-1.53	0.75	0.517393
5768	2R_DroMel_CAF1	18,289,685 – 18,289,806	- - - - - - - - -	9241	18,289,715 – 18,289,806	+	6	93	85.96	-2.29	0.75	0.551860
5769	2R_DroMel_CAF1	18,290,044 – 18,290,145	- - "RNAmicro=f:18290044_t:18290161_strand:-_p:0.881841" - - - - - -	9242	18,290,044 – 18,290,145	+	5	118	83.74	-2.68	0.70	0.969746
5769	2R_DroMel_CAF1	18,290,044 – 18,290,145		9243	18,290,044 – 18,290,145	-	5	118	83.74	-1.76	0.84	0.808315
5770	2R_DroMel_CAF1	18,296,124 – 18,296,236	- - - - - - - - -	9244	18,296,124 – 18,296,236	-	5	112	94.20	-1.22	0.89	0.651139
5771	2R_DroMel_CAF1	18,297,728 – 18,297,862	- - - - - - - - -	9245	18,297,728 – 18,297,822	+	5	94	87.45	-1.52	0.73	0.500000
5771	2R_DroMel_CAF1	18,297,728 – 18,297,862	- - - - - - - - -	9246	18,297,755 – 18,297,862	+	5	107	80.60	-1.96	0.55	0.631696
5772	2R_DroMel_CAF1	18,298,666 – 18,298,808	- - - - - - - - -	9247	18,298,666 – 18,298,785	+	6	119	91.94	-2.77	0.91	0.998772
				9248	18,298,666 – 18,298,785	-	6	119	91.94	-2.06	0.80	0.500000
				9249	18,298,705 – 18,298,808	+	6	120	81.88	-3.03	0.77	0.939427
5773	2R_DroMel_CAF1	18,299,868 – 18,299,960	- - - - - - - - -	9250	18,299,868 – 18,299,960	+	5	99	78.28	-2.63	0.60	0.991670
5774	2R_DroMel_CAF1	18,302,267 – 18,302,363	- - - - - - - - -	9251	18,302,267 – 18,302,363	-	5	96	88.99	-1.94	0.82	0.938202
5775	2R_DroMel_CAF1	18,305,628 – 18,305,725	- - - - - - - - -	9252	18,305,628 – 18,305,725	-	5	98	94.86	-2.37	0.78	0.930595
5776	2R_DroMel_CAF1	18,307,441 – 18,307,533	- - - - - - - - -	9253	18,307,441 – 18,307,533	-	6	106	70.32	-0.69	0.75	0.692310
5777	2R_DroMel_CAF1	18,308,013 – 18,308,114	- - - - - - - - -	9254	18,308,013 – 18,308,114	+	6	109	80.64	-1.96	0.68	0.835897
5778	2R_DroMel_CAF1	18,310,836 – 18,310,927	- - - - - - - - -	9255	18,310,836 – 18,310,927	+	3	116	68.11	-2.91	0.50	0.999280
5778	2R_DroMel_CAF1	18,310,836 – 18,310,927	- - - - - - - - -	9256	18,310,836 – 18,310,927	-	3	116	68.11	-3.15	0.41	0.964802
5779	2R_DroMel_CAF1	18,311,605 – 18,311,701	- - - - - - - - -	9257	18,311,605 – 18,311,701	+	5	109	84.09	-1.69	0.66	0.519614
5779	2R_DroMel_CAF1	18,311,605 – 18,311,701	- - - - - - - - -	9258	18,311,605 – 18,311,701	-	5	109	84.09	-2.00	0.66	0.706728
5780	2R_DroMel_CAF1	18,312,808 – 18,312,908	- - - "knownCDS=Parent=FBtr0071911, FBtr0071912, FBtr0071913, FBtr0071914;Name=CycB-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3510-RA, FlyBase+Annotation+IDs:CG3510-RD, FlyBase+Annotation+IDs:CG3510-RB, FlyBase+Annotation+IDs:CG3510-RC" - - - - -	9259	18,312,808 – 18,312,908	+	6	110	81.74	-1.67	0.66	0.613772
5780	2R_DroMel_CAF1	18,312,808 – 18,312,908		9260	18,312,808 – 18,312,908	-	6	110	81.74	-2.59	0.53	0.687949
5781	2R_DroMel_CAF1	18,319,923 – 18,320,015	- - - "knownCDS=Parent=FBtr0071884;Name=CG3622-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3622-RB" - - - - -	9261	18,319,923 – 18,320,015	+	6	92	84.80	-2.29	0.79	0.783400
5781	2R_DroMel_CAF1	18,319,923 – 18,320,015		9262	18,319,923 – 18,320,015	-	6	92	84.80	-2.13	0.72	0.531325
5782	2R_DroMel_CAF1	18,323,240 – 18,323,344	- - - "knownCDS=Parent=FBtr0071885;Name=CG3622-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3622-RA" - - - - -	9263	18,323,240 – 18,323,344	-	6	113	84.34	-1.87	0.80	0.696464
5783	2R_DroMel_CAF1	18,324,176 – 18,324,267	- - - - - - - - -	9264	18,324,176 – 18,324,267	-	6	91	65.26	-1.31	0.49	0.500000
5784	2R_DroMel_CAF1	18,330,048 – 18,330,141	- - - - - - - - -	9265	18,330,048 – 18,330,141	-	5	93	92.47	-2.12	0.84	0.988806
5785	2R_DroMel_CAF1	18,331,247 – 18,331,346	- - - "knownCDS=Parent=FBtr0071887;Name=CG30266-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30266-RA" - - - - -	9266	18,331,247 – 18,331,346	+	6	120	79.45	-1.08	0.70	0.518330
5786	2R_DroMel_CAF1	18,332,174 – 18,332,271	- - - - - - - - -	9267	18,332,174 – 18,332,271	+	6	111	83.15	-1.56	0.76	0.582563
5787	2R_DroMel_CAF1	18,337,169 – 18,337,265	- - - - - - - - -	9268	18,337,169 – 18,337,265	+	6	112	70.03	-2.22	0.37	0.938822
5788	2R_DroMel_CAF1	18,341,357 – 18,341,462	- - - "knownCDS=Parent=FBtr0071891;Name=CG30265-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30265-RA" - - - - -	9269	18,341,357 – 18,341,462	-	6	105	80.89	-1.67	0.62	0.586520
5789	2R_DroMel_CAF1	18,341,899 – 18,342,008	- - - "knownCDS=Parent=FBtr0071891;Name=CG30265-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30265-RA" - - - - -	9270	18,341,899 – 18,342,008	-	6	117	71.82	-1.81	0.39	0.509615
5790	2R_DroMel_CAF1	18,347,320 – 18,347,413	- - - - - - - - -	9271	18,347,320 – 18,347,413	+	3	113	76.80	-1.90	0.59	0.728589
5790	2R_DroMel_CAF1	18,347,320 – 18,347,413	- - - - - - - - -	9272	18,347,320 – 18,347,413	-	3	113	76.80	-3.10	0.57	0.996334
5791	2R_DroMel_CAF1	18,347,531 – 18,347,631	- - - - - - - - -	9273	18,347,531 – 18,347,631	-	3	100	82.00	-2.02	0.65	0.708406
5792	2R_DroMel_CAF1	18,348,451 – 18,348,643	- - - "knownCDS=Parent=FBtr0071894, FBtr0071895;Name=CG9826-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9826-RA, FlyBase+Annotation+IDs:CG9826-RB" - - - - -	9274	18,348,451 – 18,348,571	-	4	120	95.56	-1.90	0.88	0.790619
5792	2R_DroMel_CAF1	18,348,451 – 18,348,643		9275	18,348,531 – 18,348,643	-	4	120	84.80	-1.80	0.72	0.744928
5793	2R_DroMel_CAF1	18,348,951 – 18,349,111	- - - "knownCDS=Parent=FBtr0071895;Name=CG9826-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9826-RB" - - - - -	9276	18,348,951 – 18,349,071	+	4	120	95.97	-1.50	0.96	0.634699
5793	2R_DroMel_CAF1	18,348,951 – 18,349,111		9277	18,348,991 – 18,349,111	+	4	120	95.14	-2.29	0.91	0.951832
5794	2R_DroMel_CAF1	18,349,511 – 18,349,671	- - - "knownCDS=Parent=FBtr0071895;Name=CG9826-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9826-RB" - - - - -	9278	18,349,511 – 18,349,631	+	4	120	95.97	-1.66	0.99	0.824901
5794	2R_DroMel_CAF1	18,349,511 – 18,349,671		9279	18,349,551 – 18,349,671	+	4	120	95.14	-1.38	0.98	0.595885
5795	2R_DroMel_CAF1	18,350,307 – 18,350,423	- - - - - - - - -	9280	18,350,307 – 18,350,423	+	4	120	91.95	-2.04	0.79	0.803457
5796	2R_DroMel_CAF1	18,352,825 – 18,353,022	- - - - - - - - -	9281	18,352,825 – 18,352,942	-	4	120	90.72	-1.50	0.81	0.587585
5796	2R_DroMel_CAF1	18,352,825 – 18,353,022	- - - - - - - - -	9282	18,352,902 – 18,353,022	-	4	120	90.00	-2.24	0.77	0.874656
5797	2R_DroMel_CAF1	18,353,470 – 18,353,590	- - "RNAmicro=f:18353470_t:18353589_strand:+_p:0.982633" - - - - - -	9283	18,353,470 – 18,353,590	+	4	120	93.58	-2.24	0.92	0.971413
5797	2R_DroMel_CAF1	18,353,470 – 18,353,590		9284	18,353,470 – 18,353,590	-	4	120	93.58	-2.63	0.87	0.972615
5798	2R_DroMel_CAF1	18,353,790 – 18,353,950	- - - "knownCDS=Parent=FBtr0071896;Name=CG3649-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3649-RA" - - - - -	9285	18,353,790 – 18,353,910	-	4	120	92.36	-1.63	0.88	0.766768
5798	2R_DroMel_CAF1	18,353,790 – 18,353,950		9286	18,353,830 – 18,353,950	-	4	120	90.83	-1.75	0.78	0.681656
5799	2R_DroMel_CAF1	18,358,306 – 18,358,506	- - - "knownCDS=Parent=FBtr0071910;Name=CG13531-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13531-RB" - - - - -	9287	18,358,306 – 18,358,426	-	6	120	78.72	-2.08	0.56	0.834986
				9288	18,358,346 – 18,358,466	+	6	120	80.44	-2.70	0.47	0.771293
				9289	18,358,346 – 18,358,466	-	6	120	80.44	-3.46	0.42	0.922080
				9290	18,358,386 – 18,358,506	+	6	120	81.94	-2.49	0.62	0.791655
				9291	18,358,386 – 18,358,506	-	6	120	81.94	-2.46	0.52	0.565805
5800	2R_DroMel_CAF1	18,360,578 – 18,360,675	- - - "knownCDS=Parent=FBtr0071910;Name=CG13531-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13531-RB" - - - - -	9292	18,360,578 – 18,360,675	-	6	99	82.18	-1.66	0.63	0.500000
5801	2R_DroMel_CAF1	18,364,788 – 18,364,908	- - - "knownCDS=Parent=FBtr0071909;Name=inaD-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3504-RA" - - - - -	9293	18,364,788 – 18,364,908	-	6	120	82.61	-1.70	0.73	0.646735
5802	2R_DroMel_CAF1	18,372,995 – 18,373,093	- - - - - - - - -	9294	18,372,995 – 18,373,093	+	6	106	78.38	-1.72	0.60	0.744160
5802	2R_DroMel_CAF1	18,372,995 – 18,373,093	- - - - - - - - -	9295	18,372,995 – 18,373,093	-	6	106	78.38	-1.46	0.65	0.715707
5803	2R_DroMel_CAF1	18,375,145 – 18,375,252	- - - - - - - - -	9296	18,375,145 – 18,375,252	+	6	108	81.93	-1.89	0.60	0.538684
5803	2R_DroMel_CAF1	18,375,145 – 18,375,252	- - - - - - - - -	9297	18,375,145 – 18,375,252	-	6	108	81.93	-2.08	0.72	0.807161
5804	2R_DroMel_CAF1	18,378,749 – 18,378,844	- - - - - - - - -	9298	18,378,749 – 18,378,844	+	6	113	78.25	-2.33	0.59	0.945355
5804	2R_DroMel_CAF1	18,378,749 – 18,378,844	- - - - - - - - -	9299	18,378,749 – 18,378,844	-	6	113	78.25	-2.12	0.62	0.931423
5805	2R_DroMel_CAF1	18,385,275 – 18,385,375	- - - - - - - - -	9300	18,385,275 – 18,385,375	+	6	118	78.32	-1.45	0.78	0.870507
5806	2R_DroMel_CAF1	18,385,538 – 18,385,630	- - - - - - - - -	9301	18,385,538 – 18,385,630	-	4	109	84.90	-2.48	0.86	0.984184
5807	2R_DroMel_CAF1	18,392,649 – 18,392,760	- - - "knownCDS=Parent=FBtr0071906;Name=CG3499-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3499-RB" - - - - -	9302	18,392,649 – 18,392,760	+	6	120	80.76	-1.39	0.67	0.567735
5808	2R_DroMel_CAF1	18,396,092 – 18,396,204	- - - "knownCDS=Parent=FBtr0071905;Name=Gmer-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3495-RA" - - - - -	9303	18,396,092 – 18,396,204	+	6	120	72.74	-1.02	0.66	0.548792
5809	2R_DroMel_CAF1	18,402,888 – 18,403,005	- - - "knownCDS=Parent=FBtr0071904;Name=CG3700-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3700-RA" - - - - -	9304	18,402,888 – 18,403,005	-	6	120	73.96	-1.75	0.50	0.698157
5810	2R_DroMel_CAF1	18,405,844 – 18,405,951	- - - - - - - - -	9305	18,405,844 – 18,405,951	+	5	107	91.78	-2.12	0.85	0.991984
5811	2R_DroMel_CAF1	18,407,653 – 18,407,745	- - - - - - - - -	9306	18,407,653 – 18,407,745	+	5	96	88.89	-2.39	0.72	0.873390
5812	2R_DroMel_CAF1	18,409,028 – 18,409,135	- - - - - - - - -	9307	18,409,028 – 18,409,135	+	5	107	96.92	-2.01	0.89	0.990621
5813	2R_DroMel_CAF1	18,410,529 – 18,410,693	- - - - - - - - -	9308	18,410,529 – 18,410,621	-	5	98	97.46	-1.18	0.95	0.637038
				9309	18,410,553 – 18,410,658	-	5	111	96.28	-1.31	0.92	0.821226
				9310	18,410,587 – 18,410,693	+	5	117	93.48	-1.57	0.80	0.685784
				9311	18,410,587 – 18,410,693	-	5	117	93.48	-2.17	0.85	0.993393
5814	2R_DroMel_CAF1	18,413,448 – 18,413,545	- - - - - - - - -	9312	18,413,448 – 18,413,545	+	6	107	78.33	-1.88	0.54	0.661936
5815	2R_DroMel_CAF1	18,414,161 – 18,414,281	- - - - - - - - -	9313	18,414,161 – 18,414,262	+	5	118	80.34	-1.93	0.54	0.595677
				9314	18,414,186 – 18,414,281	+	5	97	88.87	-1.88	0.70	0.546495
				9315	18,414,186 – 18,414,281	-	5	97	88.87	-1.99	0.83	0.957613
5816	2R_DroMel_CAF1	18,421,759 – 18,421,864	- - - "knownCDS=Parent=FBtr0071943;Name=nahoda-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12781-RB" - - - - -	9316	18,421,759 – 18,421,864	-	6	114	81.91	-1.37	0.75	0.582205
5817	2R_DroMel_CAF1	18,427,597 – 18,427,693	- - - "knownCDS=Parent=FBtr0071996;Name=Nup214-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3820-RA" - - - - -	9317	18,427,597 – 18,427,693	-	5	114	81.55	-2.43	0.70	0.965665
5818	2R_DroMel_CAF1	18,427,840 – 18,427,980	- - - "knownCDS=Parent=FBtr0071996;Name=Nup214-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3820-RA" - - - - -	9318	18,427,840 – 18,427,951	-	6	114	76.66	-2.61	0.58	0.986582
5818	2R_DroMel_CAF1	18,427,840 – 18,427,980		9319	18,427,877 – 18,427,980	-	6	112	78.81	-1.94	0.66	0.905452
5819	2R_DroMel_CAF1	18,431,895 – 18,431,995	- - - - - - - - -	9320	18,431,895 – 18,431,995	-	6	105	79.02	-1.46	0.60	0.520260
5820	2R_DroMel_CAF1	18,433,525 – 18,433,615	- - - - - - - - -	9321	18,433,525 – 18,433,615	+	6	97	80.52	-2.48	0.67	0.921333
5820	2R_DroMel_CAF1	18,433,525 – 18,433,615	- - - - - - - - -	9322	18,433,525 – 18,433,615	-	6	97	80.52	-1.95	0.66	0.821886
5821	2R_DroMel_CAF1	18,454,297 – 18,454,390	- - - - - - - - -	9323	18,454,297 – 18,454,390	+	6	98	75.14	-2.13	0.74	0.985924
5822	2R_DroMel_CAF1	18,454,456 – 18,454,547	- - "RNAmicro=f:18454456_t:18454546_strand:+_p:0.980682" "knownCDS=Parent=FBtr0071952;Name=CG13534-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13534-RA" - - - - -	9324	18,454,456 – 18,454,547	+	6	91	77.05	-2.53	0.61	0.983023
5822	2R_DroMel_CAF1	18,454,456 – 18,454,547		9325	18,454,456 – 18,454,547	-	6	91	77.05	-3.25	0.72	0.988681
5823	2R_DroMel_CAF1	18,456,067 – 18,456,206	- - - - - - - - -	9326	18,456,067 – 18,456,166	+	6	109	83.76	-2.56	0.65	0.629190
5823	2R_DroMel_CAF1	18,456,067 – 18,456,206	- - - - - - - - -	9327	18,456,104 – 18,456,206	+	5	112	70.36	-1.90	0.45	0.872675
5824	2R_DroMel_CAF1	18,457,710 – 18,457,800	- - - - - - - - -	9328	18,457,710 – 18,457,800	+	4	90	86.85	-2.04	0.61	0.507246
5824	2R_DroMel_CAF1	18,457,710 – 18,457,800	- - - - - - - - -	9329	18,457,710 – 18,457,800	-	4	90	86.85	-1.41	0.72	0.517055
5825	2R_DroMel_CAF1	18,459,711 – 18,459,820	- - - - - - - - -	9330	18,459,711 – 18,459,820	+	6	120	71.11	-2.04	0.63	0.986521
5825	2R_DroMel_CAF1	18,459,711 – 18,459,820	- - - - - - - - -	9331	18,459,711 – 18,459,820	-	6	120	71.11	-2.49	0.48	0.993363
5826	2R_DroMel_CAF1	18,461,863 – 18,461,960	- - - - - - - - -	9332	18,461,863 – 18,461,960	-	5	120	66.70	-1.63	0.57	0.857837
5827	2R_DroMel_CAF1	18,463,556 – 18,463,653	- - - - - - - - -	9333	18,463,556 – 18,463,653	-	6	97	93.13	-2.27	0.89	0.990601
5828	2R_DroMel_CAF1	18,464,128 – 18,464,228	- - - - - - - - -	9334	18,464,128 – 18,464,228	+	6	110	77.24	-2.26	0.46	0.815352
5828	2R_DroMel_CAF1	18,464,128 – 18,464,228	- - - - - - - - -	9335	18,464,128 – 18,464,228	-	6	110	77.24	-1.81	0.59	0.826755
5829	2R_DroMel_CAF1	18,465,814 – 18,465,937	- - - - - - - - -	9336	18,465,814 – 18,465,913	+	5	99	85.56	-1.74	0.74	0.666083
				9337	18,465,814 – 18,465,913	-	5	99	85.56	-2.39	0.85	0.988469
				9338	18,465,837 – 18,465,937	-	6	110	81.48	-2.48	0.72	0.898000
5830	2R_DroMel_CAF1	18,466,342 – 18,466,443	- - - - - - - - -	9339	18,466,342 – 18,466,443	+	3	101	96.68	-1.68	0.90	0.500000
5831	2R_DroMel_CAF1	18,471,637 – 18,471,727	- - - - - - - - -	9340	18,471,637 – 18,471,727	-	5	91	96.68	-1.65	0.87	0.891927
5832	2R_DroMel_CAF1	18,478,376 – 18,478,474	- - - - - - - - -	9341	18,478,376 – 18,478,474	+	4	98	93.37	-2.50	0.87	0.968161
5832	2R_DroMel_CAF1	18,478,376 – 18,478,474	- - - - - - - - -	9342	18,478,376 – 18,478,474	-	4	98	93.37	-1.66	0.84	0.665061
5833	2R_DroMel_CAF1	18,478,726 – 18,478,818	- - - - - - - - -	9343	18,478,726 – 18,478,818	+	5	108	74.37	-1.80	0.25	0.777676
5834	2R_DroMel_CAF1	18,485,645 – 18,485,833	- - - - - - - - -	9344	18,485,645 – 18,485,737	+	3	93	76.87	-1.51	0.76	0.852521
				9345	18,485,645 – 18,485,737	-	3	93	76.87	-2.08	0.57	0.801987
				9346	18,485,658 – 18,485,773	+	4	118	68.11	-1.87	0.48	0.817952
				9347	18,485,698 – 18,485,798	-	3	101	73.15	-2.64	0.46	0.725697
				9348	18,485,737 – 18,485,833	+	3	98	77.40	-2.04	0.67	0.956430
				9349	18,485,737 – 18,485,833	-	3	98	77.40	-2.43	0.63	0.987243
5835	2R_DroMel_CAF1	18,491,325 – 18,491,485	- - - "knownCDS=Parent=FBtr0071991;Name=CG32834-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32834-RA" - - - - -	9350	18,491,325 – 18,491,445	-	4	120	92.50	-3.51	0.90	0.993868
				9351	18,491,365 – 18,491,485	+	4	120	90.56	-2.39	0.82	0.950026
				9352	18,491,365 – 18,491,485	-	4	120	90.56	-2.18	0.80	0.896798
5836	2R_DroMel_CAF1	18,491,685 – 18,491,805	- - - "knownCDS=Parent=FBtr0071991;Name=CG32834-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32834-RA" - - - - -	9353	18,491,685 – 18,491,805	+	4	120	86.39	-2.45	0.72	0.930213
5836	2R_DroMel_CAF1	18,491,685 – 18,491,805		9354	18,491,685 – 18,491,805	-	4	120	86.39	-2.28	0.80	0.944745
5837	2R_DroMel_CAF1	18,491,882 – 18,492,034	- - - - - - - - -	9355	18,491,882 – 18,491,995	+	4	120	79.30	-2.14	0.56	0.719203
				9356	18,491,882 – 18,491,995	-	4	120	79.30	-1.81	0.64	0.689040
				9357	18,491,920 – 18,492,034	-	4	120	81.59	-1.67	0.65	0.570143
5838	2R_DroMel_CAF1	18,493,591 – 18,493,831	- - - "knownCDS=Parent=FBtr0071989;Name=CG9897-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9897-RA" - - - - -	9358	18,493,591 – 18,493,711	-	5	120	89.92	-1.77	0.77	0.749012
5838	2R_DroMel_CAF1	18,493,591 – 18,493,831		9359	18,493,711 – 18,493,831	+	5	120	92.00	-1.13	0.91	0.538075
5839	2R_DroMel_CAF1	18,494,145 – 18,494,295	- - - - - - - - -	9360	18,494,145 – 18,494,256	-	5	120	81.96	-2.15	0.72	0.915552
5839	2R_DroMel_CAF1	18,494,145 – 18,494,295	- - - - - - - - -	9361	18,494,185 – 18,494,295	-	5	120	92.23	-1.57	0.82	0.799362
5840	2R_DroMel_CAF1	18,495,017 – 18,495,355	- - - - - - - - -	9362	18,495,017 – 18,495,128	+	5	120	85.80	-1.49	0.76	0.505682
				9363	18,495,017 – 18,495,128	-	5	120	85.80	-1.68	0.73	0.612823
				9364	18,495,054 – 18,495,168	+	5	120	93.16	-1.66	0.84	0.908809
				9365	18,495,054 – 18,495,168	-	5	120	93.16	-2.88	0.91	0.999928
				9366	18,495,088 – 18,495,208	+	5	120	95.00	-1.81	0.80	0.812413
				9367	18,495,128 – 18,495,248	+	5	120	98.00	-2.29	0.85	0.972652
				9368	18,495,248 – 18,495,355	-	4	114	79.59	-2.19	0.64	0.928372
5841	2R_DroMel_CAF1	18,495,721 – 18,495,840	- - - - - - - - -	9369	18,495,721 – 18,495,840	+	4	120	90.10	-1.46	0.86	0.631448
5842	2R_DroMel_CAF1	18,496,163 – 18,496,283	- - - - - - - - -	9370	18,496,163 – 18,496,283	-	4	120	97.36	-1.69	0.91	0.573317
5843	2R_DroMel_CAF1	18,497,109 – 18,497,269	- - - - - - - - -	9371	18,497,109 – 18,497,229	+	4	120	98.75	-3.13	0.98	0.957612
				9372	18,497,109 – 18,497,229	-	4	120	98.75	-2.84	0.94	0.925162
				9373	18,497,149 – 18,497,269	-	4	120	98.75	-1.98	1.00	0.801616
5844	2R_DroMel_CAF1	18,497,309 – 18,497,660	- - - - - - - - -	9374	18,497,309 – 18,497,423	-	4	120	91.01	-1.39	0.84	0.516609
				9375	18,497,386 – 18,497,500	+	4	120	87.78	-1.72	0.67	0.570194
				9376	18,497,386 – 18,497,500	-	4	120	87.78	-1.93	0.73	0.783299
				9377	18,497,463 – 18,497,580	-	4	120	89.31	-1.64	0.76	0.635703
				9378	18,497,540 – 18,497,660	+	4	120	96.11	-2.37	0.96	0.972255
5845	2R_DroMel_CAF1	18,498,024 – 18,498,224	- - - - - - - - -	9379	18,498,024 – 18,498,144	-	3	120	99.44	-1.66	0.98	0.724111
				9380	18,498,064 – 18,498,184	+	3	120	100.00	-2.44	1.00	0.966781
				9381	18,498,064 – 18,498,184	-	3	120	100.00	-3.01	1.00	0.987430
				9382	18,498,104 – 18,498,224	+	3	120	97.78	-2.73	0.99	0.984356
				9383	18,498,104 – 18,498,224	-	3	120	97.78	-2.90	0.98	0.986447
5846	2R_DroMel_CAF1	18,498,424 – 18,498,544	- - - - - - - - -	9384	18,498,424 – 18,498,544	+	3	120	98.89	-1.40	1.00	0.582098
5847	2R_DroMel_CAF1	18,499,295 – 18,499,495	- - - - - - - - -	9385	18,499,295 – 18,499,415	+	3	120	97.78	-2.76	0.95	0.968835
				9386	18,499,295 – 18,499,415	-	3	120	97.78	-2.35	0.95	0.934446
				9387	18,499,375 – 18,499,495	-	3	120	96.08	-2.03	0.93	0.806504
5848	2R_DroMel_CAF1	18,499,695 – 18,499,891	- - - - - - - - -	9388	18,499,695 – 18,499,811	+	3	117	93.16	-1.97	0.82	0.500000
				9389	18,499,695 – 18,499,811	-	3	117	93.16	-2.26	0.80	0.589751
				9390	18,499,735 – 18,499,851	+	3	117	90.78	-2.26	0.83	0.736018
				9391	18,499,735 – 18,499,851	-	3	117	90.78	-2.38	0.91	0.938959
				9392	18,499,775 – 18,499,891	-	3	117	95.39	-1.40	0.99	0.583173
5849	2R_DroMel_CAF1	18,502,754 – 18,502,852	- - - - - - - - -	9393	18,502,754 – 18,502,852	-	4	98	84.02	-1.83	0.60	0.520265
5850	2R_DroMel_CAF1	18,507,032 – 18,507,163	- - - - - - - - -	9394	18,507,032 – 18,507,130	+	6	102	85.85	-1.96	0.83	0.743705
5850	2R_DroMel_CAF1	18,507,032 – 18,507,163	- - - - - - - - -	9395	18,507,057 – 18,507,163	+	6	114	85.08	-2.76	0.69	0.586545
5851	2R_DroMel_CAF1	18,507,711 – 18,507,855	- - - - - - - - -	9396	18,507,711 – 18,507,828	-	6	120	76.21	-1.77	0.51	0.590981
5851	2R_DroMel_CAF1	18,507,711 – 18,507,855	- - - - - - - - -	9397	18,507,750 – 18,507,855	-	5	118	79.84	-1.62	0.70	0.671949
5852	2R_DroMel_CAF1	18,510,608 – 18,510,714	- - - - - - - - -	9398	18,510,608 – 18,510,714	-	5	110	90.42	-1.80	0.78	0.825301
5853	2R_DroMel_CAF1	18,514,027 – 18,514,134	- - - - - - - - -	9399	18,514,027 – 18,514,134	-	5	107	94.58	-1.23	0.88	0.624571
5854	2R_DroMel_CAF1	18,514,398 – 18,514,488	- - - - - - - - -	9400	18,514,398 – 18,514,488	+	5	100	86.01	-1.81	0.67	0.547980
5854	2R_DroMel_CAF1	18,514,398 – 18,514,488	- - - - - - - - -	9401	18,514,398 – 18,514,488	-	5	100	86.01	-1.69	0.70	0.542149
5855	2R_DroMel_CAF1	18,514,780 – 18,514,873	- - - - - - - - -	9402	18,514,780 – 18,514,873	-	5	95	95.22	-3.07	0.93	0.999960
5856	2R_DroMel_CAF1	18,516,316 – 18,516,451	- - - - - - - - -	9403	18,516,316 – 18,516,425	+	5	120	81.29	-2.80	0.61	0.980763
5856	2R_DroMel_CAF1	18,516,316 – 18,516,451	- - - - - - - - -	9404	18,516,347 – 18,516,451	-	6	117	81.65	-1.67	0.62	0.531292
5857	2R_DroMel_CAF1	18,518,242 – 18,518,396	- - - - - - - - -	9405	18,518,242 – 18,518,341	-	5	111	93.60	-1.84	0.80	0.865516
				9406	18,518,301 – 18,518,396	+	5	97	98.75	-2.88	0.99	0.999838
				9407	18,518,301 – 18,518,396	-	5	97	98.75	-1.64	0.93	0.930861
5858	2R_DroMel_CAF1	18,521,546 – 18,521,644	- - - - - - - - -	9408	18,521,546 – 18,521,644	-	6	102	79.94	-1.63	0.61	0.597914
5859	2R_DroMel_CAF1	18,524,099 – 18,524,193	- - - - - - - - -	9409	18,524,099 – 18,524,193	-	6	109	82.47	-1.47	0.70	0.530819
5860	2R_DroMel_CAF1	18,530,430 – 18,530,548	- - - - - - - - -	9410	18,530,430 – 18,530,548	-	6	120	75.17	-1.62	0.60	0.824785
5861	2R_DroMel_CAF1	18,532,220 – 18,532,355	- - - - - - - - -	9411	18,532,220 – 18,532,318	-	6	117	76.46	-1.65	0.67	0.913067
5861	2R_DroMel_CAF1	18,532,220 – 18,532,355	- - - - - - - - -	9412	18,532,252 – 18,532,355	+	6	120	82.70	-2.11	0.65	0.654412
5862	2R_DroMel_CAF1	18,536,657 – 18,536,757	- - - - - - - - -	9413	18,536,657 – 18,536,757	+	6	110	84.10	-2.15	0.77	0.731503
5863	2R_DroMel_CAF1	18,538,464 – 18,538,604	- - - - - - - - -	9414	18,538,464 – 18,538,567	-	6	117	85.40	-1.66	0.81	0.557011
5863	2R_DroMel_CAF1	18,538,464 – 18,538,604	- - - - - - - - -	9415	18,538,487 – 18,538,604	-	6	120	82.09	-1.72	0.82	0.781188
5864	2R_DroMel_CAF1	18,538,991 – 18,539,099	- - - - - - - - -	9416	18,538,991 – 18,539,099	+	5	112	91.33	-1.45	0.83	0.708230
5865	2R_DroMel_CAF1	18,540,331 – 18,540,425	- - - - - - - - -	9417	18,540,331 – 18,540,425	+	3	94	89.36	-3.92	0.77	0.930924
5866	2R_DroMel_CAF1	18,542,646 – 18,542,791	- - - - - - - - -	9418	18,542,646 – 18,542,761	+	6	120	82.79	-2.37	0.70	0.779264
5866	2R_DroMel_CAF1	18,542,646 – 18,542,791	- - - - - - - - -	9419	18,542,681 – 18,542,791	+	6	120	81.95	-2.89	0.58	0.846852
5867	2R_DroMel_CAF1	18,544,508 – 18,544,598	- - - - - - - - -	9420	18,544,508 – 18,544,598	+	6	105	82.29	-1.56	0.70	0.586854
5868	2R_DroMel_CAF1	18,548,592 – 18,548,688	- - - - - - - - -	9421	18,548,592 – 18,548,688	-	5	97	82.21	-2.08	0.53	0.564161
5869	2R_DroMel_CAF1	18,548,900 – 18,548,997	- - - - - - - - -	9422	18,548,900 – 18,548,997	+	6	100	75.31	-1.53	0.57	0.629784
5870	2R_DroMel_CAF1	18,549,200 – 18,549,294	- - - - - - - - -	9423	18,549,200 – 18,549,294	-	6	120	81.53	-1.67	0.64	0.598838
5871	2R_DroMel_CAF1	18,560,824 – 18,560,987	- - - - - - - - -	9424	18,560,824 – 18,560,916	+	6	99	77.25	-1.47	0.59	0.552277
				9425	18,560,824 – 18,560,916	-	6	99	77.25	-2.27	0.62	0.968002
				9426	18,560,852 – 18,560,949	-	6	97	90.24	-1.15	0.92	0.607065
				9427	18,560,886 – 18,560,987	+	6	101	85.61	-1.58	0.82	0.512214
				9428	18,560,886 – 18,560,987	-	6	101	85.61	-3.79	0.87	0.990963
5872	2R_DroMel_CAF1	18,562,956 – 18,563,060	- - - - - - - - -	9429	18,562,956 – 18,563,060	-	5	104	90.99	-1.49	0.84	0.794959
5873	2R_DroMel_CAF1	18,568,970 – 18,569,087	- - - - - - - - -	9430	18,568,970 – 18,569,087	-	5	120	82.85	-2.46	0.66	0.931719
5874	2R_DroMel_CAF1	18,571,723 – 18,571,825	- - - "knownCDS=Parent=FBtr0071984;Name=CG9890-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9890-RA" - - - - -	9431	18,571,723 – 18,571,825	-	6	102	87.71	-2.55	0.78	0.683359
5875	2R_DroMel_CAF1	18,572,825 – 18,572,945	- - - "knownCDS=Parent=FBtr0071957;Name=Dox-A3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2952-RA" - - - - -	9432	18,572,825 – 18,572,945	+	5	120	90.25	-1.31	0.81	0.500000
5876	2R_DroMel_CAF1	18,573,876 – 18,574,036	- - - "knownCDS=Parent=FBtr0071957;Name=Dox-A3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2952-RA" - - - - -	9433	18,573,876 – 18,573,996	+	5	120	95.08	-2.22	0.94	0.999612
				9434	18,573,876 – 18,573,996	-	5	120	95.08	-1.19	0.90	0.600427
				9435	18,573,916 – 18,574,036	-	5	120	96.00	-1.18	0.93	0.663459
5877	2R_DroMel_CAF1	18,574,429 – 18,574,549	- - - "knownCDS=Parent=FBtr0071957;Name=Dox-A3-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2952-RA" - - - - -	9436	18,574,429 – 18,574,549	+	5	120	89.00	-1.73	0.73	0.605324
5878	2R_DroMel_CAF1	18,579,596 – 18,579,709	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000132; Name=Dmel_Ser_TGA_14000132;TFAMID=DmelSTGA-18579700" "tRNAscan=type:Ser:anticodon:TGA f:18579618_t:18579721_strand=-_cove=79.78" - - "Rfam=AC099035.2/173717-173636_RF00005;tRNA;\|9e-41" - - "ncRNAdb=MmuscAK029664_unclassifiable\|1e-09" "Flybase=FBgn0050201:CR30201:cytosolic_tRNA_gene\|1e-42"	9437	18,579,596 – 18,579,709	+	6	120	78.26	-2.62	0.93	0.975585
5878	2R_DroMel_CAF1	18,579,596 – 18,579,709		9438	18,579,596 – 18,579,709	-	6	120	78.26	-1.29	0.91	0.821597
5879	2R_DroMel_CAF1	18,580,171 – 18,580,276	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000133; Name=Dmel_Ser_TGA_14000133;TFAMID=DmelSTGA-18580181" "tRNAscan=type:Ser:anticodon:TGA f:18580180_t:18580270_strand=+_cove=76.82" - - "Rfam=AC099035.2/173717-173636_RF00005;tRNA;\|2e-32" - - "ncRNAdb=MmuscAK029664_unclassifiable\|2e-14" "Flybase=FBgn0050202:CR30202:cytosolic_tRNA_gene\|1e-42"	9439	18,580,171 – 18,580,276	-	6	113	84.66	-1.63	0.90	0.786090
5880	2R_DroMel_CAF1	18,581,239 – 18,581,333	- - - - - - - - -	9440	18,581,239 – 18,581,333	-	3	101	86.62	-1.57	0.89	0.697095
5881	2R_DroMel_CAF1	18,581,419 – 18,581,570	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002473; Name=snoRNA:229;Dbxref=FB:FBgn0065073,GB:NR_002553" - - - - - - - "Flybase=FBgn0065073:snoRNA:229:nuclear_small_nucleolar_RNA_gene\|4e-77"	9441	18,581,419 – 18,581,532	-	6	117	75.03	-2.62	0.59	0.993095
5881	2R_DroMel_CAF1	18,581,419 – 18,581,570		9442	18,581,458 – 18,581,570	-	6	115	77.84	-1.44	0.61	0.580079
5882	2R_DroMel_CAF1	18,582,328 – 18,582,468	- - - - - - - - -	9443	18,582,328 – 18,582,437	+	5	110	72.30	-2.61	0.41	0.997920
				9444	18,582,328 – 18,582,437	-	5	110	72.30	-1.99	0.26	0.917414
				9445	18,582,360 – 18,582,468	+	4	109	64.26	-2.17	0.40	0.729530
5883	2R_DroMel_CAF1	18,588,118 – 18,588,278	- - - "knownCDS=Parent=FBtr0071964;Name=Gr59a-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30189-RA" - - - - -	9446	18,588,118 – 18,588,238	-	5	120	89.58	-1.57	0.83	0.785263
5883	2R_DroMel_CAF1	18,588,118 – 18,588,278		9447	18,588,158 – 18,588,278	-	5	120	92.92	-1.61	0.79	0.661015
5884	2R_DroMel_CAF1	18,591,322 – 18,591,415	- - - - - - - - -	9448	18,591,322 – 18,591,415	-	6	96	79.06	-1.54	0.61	0.622242
5885	2R_DroMel_CAF1	18,592,063 – 18,592,161	- - - - - - - - -	9449	18,592,063 – 18,592,161	-	6	105	75.73	-1.67	0.73	0.956050
5886	2R_DroMel_CAF1	18,595,606 – 18,595,766	- - "RNAmicro=f:18595646_t:18595765_strand:+_p:0.970171" - - - - - -	9450	18,595,606 – 18,595,726	-	3	120	80.00	-4.84	0.81	0.997163
				9451	18,595,646 – 18,595,766	+	3	120	86.11	-1.90	0.72	0.517997
				9452	18,595,646 – 18,595,766	-	3	120	86.11	-4.17	0.88	0.984376
5887	2R_DroMel_CAF1	18,597,987 – 18,598,089	- - - "knownCDS=Parent=FBtr0071979;Name=CG9876-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9876-RA" - - - - -	9453	18,597,987 – 18,598,089	-	6	105	78.64	-2.31	0.49	0.814832
5888	2R_DroMel_CAF1	18,599,760 – 18,599,854	- - - - - - - - -	9454	18,599,760 – 18,599,854	+	6	97	77.45	-2.00	0.58	0.890247
5889	2R_DroMel_CAF1	18,600,258 – 18,600,351	- - - - - - - - -	9455	18,600,258 – 18,600,351	+	6	105	84.70	-1.36	0.94	0.707591
5890	2R_DroMel_CAF1	18,605,377 – 18,605,487	- - - - - - - - -	9456	18,605,377 – 18,605,487	-	6	113	80.65	-1.81	0.60	0.629127
5891	2R_DroMel_CAF1	18,606,151 – 18,606,248	- - - - - - - - -	9457	18,606,151 – 18,606,248	+	5	120	82.22	-1.94	0.66	0.752302
5892	2R_DroMel_CAF1	18,606,404 – 18,606,631	- - - - - - - - -	9458	18,606,404 – 18,606,511	+	5	110	94.73	-1.43	0.94	0.948013
				9459	18,606,431 – 18,606,551	+	5	120	96.00	-1.57	0.82	0.641519
				9460	18,606,471 – 18,606,591	-	5	120	94.33	-1.54	0.80	0.602041
				9461	18,606,511 – 18,606,631	+	5	120	89.50	-2.35	0.71	0.807843
				9462	18,606,511 – 18,606,631	-	5	120	89.50	-1.77	0.79	0.825501
5893	2R_DroMel_CAF1	18,610,631 – 18,610,745	- - - "knownCDS=Parent=FBtr0071977;Name=Gr59c-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30186-RA" - - - - -	9463	18,610,631 – 18,610,745	+	6	114	82.11	-1.88	0.60	0.508163
5894	2R_DroMel_CAF1	18,613,577 – 18,613,682	- - - - - - - - -	9464	18,613,577 – 18,613,682	+	5	116	64.93	-2.04	0.30	0.542156
5894	2R_DroMel_CAF1	18,613,577 – 18,613,682	- - - - - - - - -	9465	18,613,577 – 18,613,682	-	5	116	64.93	-4.58	0.39	0.997928
5895	2R_DroMel_CAF1	18,615,779 – 18,615,897	- - - - - - - - -	9466	18,615,779 – 18,615,897	+	5	120	88.55	-1.37	0.83	0.539505
5896	2R_DroMel_CAF1	18,616,073 – 18,616,184	- - - - - - - - -	9467	18,616,073 – 18,616,184	+	5	120	86.86	-1.64	0.86	0.806844
5897	2R_DroMel_CAF1	18,617,992 – 18,618,100	- - - - - - - - -	9468	18,617,992 – 18,618,100	-	5	120	86.65	-1.84	0.86	0.920118
5898	2R_DroMel_CAF1	18,618,273 – 18,618,419	- - - - - - - - -	9469	18,618,273 – 18,618,380	-	4	120	87.81	-1.49	0.76	0.582428
5898	2R_DroMel_CAF1	18,618,273 – 18,618,419	- - - - - - - - -	9470	18,618,302 – 18,618,419	-	5	120	95.18	-1.54	0.81	0.631876
5899	2R_DroMel_CAF1	18,624,389 – 18,624,491	- - - - - - - - -	9471	18,624,389 – 18,624,491	+	5	113	90.49	-2.14	0.70	0.596458
5900	2R_DroMel_CAF1	18,624,744 – 18,624,847	- - - - - - - - -	9472	18,624,744 – 18,624,847	-	5	105	90.72	-2.14	0.79	0.941468
5901	2R_DroMel_CAF1	18,626,881 – 18,627,019	- - - - - - - - -	9473	18,626,881 – 18,626,983	+	6	105	80.58	-2.09	0.65	0.839171
5901	2R_DroMel_CAF1	18,626,881 – 18,627,019	- - - - - - - - -	9474	18,626,913 – 18,627,019	+	6	112	69.21	-1.52	0.51	0.657431
5902	2R_DroMel_CAF1	18,627,335 – 18,627,444	- - - - - - - - -	9475	18,627,335 – 18,627,444	+	5	115	88.81	-1.70	0.74	0.619416
5902	2R_DroMel_CAF1	18,627,335 – 18,627,444	- - - - - - - - -	9476	18,627,335 – 18,627,444	-	5	115	88.81	-1.65	0.87	0.888033
5903	2R_DroMel_CAF1	18,627,776 – 18,627,869	- - - - - - - - -	9477	18,627,776 – 18,627,869	+	6	120	80.78	-1.84	0.56	0.500000
5904	2R_DroMel_CAF1	18,628,855 – 18,628,945	- - - - - - - - -	9478	18,628,855 – 18,628,945	+	5	92	91.19	-1.99	0.75	0.797128
5905	2R_DroMel_CAF1	18,630,260 – 18,630,408	- - - - - - - - -	9479	18,630,260 – 18,630,368	+	4	108	82.47	-3.77	0.57	0.985700
5905	2R_DroMel_CAF1	18,630,260 – 18,630,408	- - - - - - - - -	9480	18,630,300 – 18,630,408	+	4	108	87.74	-2.28	0.71	0.845713
5906	2R_DroMel_CAF1	18,631,110 – 18,631,210	- - - - - - - - -	9481	18,631,110 – 18,631,210	+	5	100	91.81	-2.86	0.78	0.987868
5906	2R_DroMel_CAF1	18,631,110 – 18,631,210	- - - - - - - - -	9482	18,631,110 – 18,631,210	-	5	100	91.81	-1.30	0.85	0.621682
5907	2R_DroMel_CAF1	18,634,129 – 18,634,226	- - - - - - - - -	9483	18,634,129 – 18,634,226	+	5	120	84.74	-3.48	0.57	0.945543
5907	2R_DroMel_CAF1	18,634,129 – 18,634,226	- - - - - - - - -	9484	18,634,129 – 18,634,226	-	5	120	84.74	-3.58	0.58	0.963222
5908	2R_DroMel_CAF1	18,634,547 – 18,634,655	- - - - - - - - -	9485	18,634,547 – 18,634,655	+	5	120	70.53	-1.78	0.37	0.669633
5909	2R_DroMel_CAF1	18,637,380 – 18,637,479	- - - - - - - - -	9486	18,637,380 – 18,637,479	-	6	102	78.09	-1.61	0.55	0.500000
5910	2R_DroMel_CAF1	18,637,593 – 18,637,710	- - - "knownCDS=Parent=FBtr0071974;Name=CG3215-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3215-RA" - - - - -	9487	18,637,593 – 18,637,710	+	6	120	73.74	-2.22	0.28	0.528900
5911	2R_DroMel_CAF1	18,637,881 – 18,638,001	- - - - - - - - -	9488	18,637,881 – 18,638,001	-	3	120	93.06	-1.69	0.94	0.709734
5912	2R_DroMel_CAF1	18,644,846 – 18,644,942	- - - - - - - - -	9489	18,644,846 – 18,644,942	+	6	113	77.64	-1.51	0.62	0.689895
5913	2R_DroMel_CAF1	18,652,113 – 18,652,219	- - - - - - - - -	9490	18,652,113 – 18,652,219	-	6	111	67.28	-2.26	0.19	0.567171
5914	2R_DroMel_CAF1	18,656,258 – 18,656,357	- - - - - - - - -	9491	18,656,258 – 18,656,357	+	5	99	90.45	-2.43	0.77	0.954158
5914	2R_DroMel_CAF1	18,656,258 – 18,656,357	- - - - - - - - -	9492	18,656,258 – 18,656,357	-	5	99	90.45	-1.70	0.78	0.737164
5915	2R_DroMel_CAF1	18,657,691 – 18,657,820	- - - - - - - - -	9493	18,657,691 – 18,657,794	-	6	108	84.88	-3.09	0.69	0.709600
5915	2R_DroMel_CAF1	18,657,691 – 18,657,820	- - - - - - - - -	9494	18,657,714 – 18,657,820	-	6	108	80.55	-1.85	0.77	0.868402
5916	2R_DroMel_CAF1	18,661,639 – 18,661,756	- - - - - - - - -	9495	18,661,639 – 18,661,756	-	6	120	78.61	-1.58	0.62	0.689558
5917	2R_DroMel_CAF1	18,661,791 – 18,661,899	- - - - - - - - -	9496	18,661,791 – 18,661,899	-	5	119	91.73	-1.47	0.79	0.566691
5918	2R_DroMel_CAF1	18,664,159 – 18,664,257	- - - - - - - - -	9497	18,664,159 – 18,664,257	+	6	103	79.53	-3.08	0.49	0.957775
5919	2R_DroMel_CAF1	18,667,832 – 18,668,007	- - - "knownCDS=Parent=FBtr0071969;Name=CG9899-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9899-RA" - - - - -	9498	18,667,832 – 18,667,940	+	6	108	82.28	-2.81	0.64	0.844225
				9499	18,667,832 – 18,667,940	-	6	108	82.28	-2.68	0.59	0.768460
				9500	18,667,872 – 18,667,980	-	6	108	82.65	-1.45	0.76	0.569436
				9501	18,667,903 – 18,668,007	-	6	105	80.26	-1.52	0.62	0.560671
5920	2R_DroMel_CAF1	18,668,700 – 18,668,820	- - - "knownCDS=Parent=FBtr0071969;Name=CG9899-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9899-RA" - - - - -	9502	18,668,700 – 18,668,820	-	6	120	72.83	-1.91	0.47	0.828439
5921	2R_DroMel_CAF1	18,672,222 – 18,672,336	- - - "knownCDS=Parent=FBtr0071971;Name=CG30188-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30188-RA" - - - - -	9503	18,672,222 – 18,672,336	-	6	117	82.55	-1.98	0.63	0.572246
5922	2R_DroMel_CAF1	18,672,511 – 18,672,619	- - - "knownCDS=Parent=FBtr0071971;Name=CG30188-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30188-RA" - - - - -	9504	18,672,511 – 18,672,619	-	6	111	79.76	-2.23	0.62	0.893632
5923	2R_DroMel_CAF1	18,677,459 – 18,677,562	- - - - - - - - -	9505	18,677,459 – 18,677,562	+	5	107	65.33	-2.35	0.22	0.615129
5924	2R_DroMel_CAF1	18,679,111 – 18,679,206	- - - - - - - - -	9506	18,679,111 – 18,679,206	+	3	95	75.94	-1.07	0.78	0.538950
5925	2R_DroMel_CAF1	18,679,749 – 18,679,863	- - - - - - - - -	9507	18,679,749 – 18,679,863	-	4	117	76.46	-1.61	0.70	0.728967
5926	2R_DroMel_CAF1	18,683,122 – 18,683,219	- - - - - - - - -	9508	18,683,122 – 18,683,219	+	5	98	81.82	-2.53	0.56	0.912528
5926	2R_DroMel_CAF1	18,683,122 – 18,683,219	- - - - - - - - -	9509	18,683,122 – 18,683,219	-	5	98	81.82	-2.90	0.45	0.928060
5927	2R_DroMel_CAF1	18,692,165 – 18,692,325	- - - "knownCDS=Parent=FBtr0071998;Name=CG13539-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13539-RA" - - - - -	9510	18,692,165 – 18,692,285	+	5	120	89.50	-2.91	0.85	0.999329
5927	2R_DroMel_CAF1	18,692,165 – 18,692,325		9511	18,692,205 – 18,692,325	+	5	120	89.42	-2.34	0.83	0.989803
5928	2R_DroMel_CAF1	18,694,787 – 18,694,886	- - - - - - - - -	9512	18,694,787 – 18,694,886	+	5	101	93.11	-2.02	0.85	0.986269
5929	2R_DroMel_CAF1	18,696,652 – 18,696,757	- - - - - - - - -	9513	18,696,652 – 18,696,757	+	6	120	79.77	-1.50	0.61	0.525733
5930	2R_DroMel_CAF1	18,697,119 – 18,697,210	- - - - - - - - -	9514	18,697,119 – 18,697,210	+	5	111	77.54	-3.01	0.51	0.998322
5931	2R_DroMel_CAF1	18,708,074 – 18,708,176	- - - - - - - - -	9515	18,708,074 – 18,708,176	+	4	102	82.33	-1.76	0.69	0.699157
5931	2R_DroMel_CAF1	18,708,074 – 18,708,176	- - - - - - - - -	9516	18,708,074 – 18,708,176	-	4	102	82.33	-1.46	0.73	0.500000
5932	2R_DroMel_CAF1	18,710,348 – 18,710,452	- - - - - - - - -	9517	18,710,348 – 18,710,452	+	5	104	76.25	-1.87	0.57	0.815494
5933	2R_DroMel_CAF1	18,718,976 – 18,719,081	- - - "knownCDS=Parent=FBtr0072052;Name=CG3162-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3162-RA" - - - - -	9518	18,718,976 – 18,719,081	+	4	106	77.89	-1.96	0.60	0.772468
5934	2R_DroMel_CAF1	18,719,532 – 18,719,629	- - - - - - - - -	9519	18,719,532 – 18,719,629	-	6	113	80.60	-2.26	0.56	0.755365
5935	2R_DroMel_CAF1	18,720,207 – 18,720,309	- - - - - - - - -	9520	18,720,207 – 18,720,309	-	6	112	74.58	-2.17	0.32	0.513168
5936	2R_DroMel_CAF1	18,727,001 – 18,727,102	- - - - - - - - -	9521	18,727,001 – 18,727,102	+	6	107	72.83	-2.45	0.25	0.764414
5937	2R_DroMel_CAF1	18,731,762 – 18,731,855	- - - - - - - - -	9522	18,731,762 – 18,731,855	+	6	112	77.54	-1.99	0.62	0.924740
5937	2R_DroMel_CAF1	18,731,762 – 18,731,855	- - - - - - - - -	9523	18,731,762 – 18,731,855	-	6	112	77.54	-3.28	0.64	0.992234
5938	2R_DroMel_CAF1	18,734,677 – 18,734,778	- - - - - - - - -	9524	18,734,677 – 18,734,778	+	5	118	74.61	-2.20	0.21	0.975088
5938	2R_DroMel_CAF1	18,734,677 – 18,734,778	- - - - - - - - -	9525	18,734,677 – 18,734,778	-	5	118	74.61	-1.72	0.34	0.539326
5939	2R_DroMel_CAF1	18,737,832 – 18,737,937	- - - - - - - - -	9526	18,737,832 – 18,737,937	+	6	111	74.00	-1.91	0.52	0.874100
5939	2R_DroMel_CAF1	18,737,832 – 18,737,937	- - - - - - - - -	9527	18,737,832 – 18,737,937	-	6	111	74.00	-2.24	0.54	0.976672
5940	2R_DroMel_CAF1	18,742,755 – 18,742,846	- - - - - - - - -	9528	18,742,755 – 18,742,846	+	6	96	81.77	-2.01	0.85	0.896687
5941	2R_DroMel_CAF1	18,743,430 – 18,743,558	- - - - - - - - -	9529	18,743,430 – 18,743,536	-	6	113	79.45	-1.80	0.55	0.549548
5941	2R_DroMel_CAF1	18,743,430 – 18,743,558	- - - - - - - - -	9530	18,743,467 – 18,743,558	-	5	98	85.18	-2.03	0.61	0.514358
5942	2R_DroMel_CAF1	18,743,927 – 18,744,020	- - - - - - - - -	9531	18,743,927 – 18,744,020	+	4	106	78.68	-2.34	0.69	0.983995
5942	2R_DroMel_CAF1	18,743,927 – 18,744,020	- - - - - - - - -	9532	18,743,927 – 18,744,020	-	4	106	78.68	-2.81	0.75	0.998777
5943	2R_DroMel_CAF1	18,745,006 – 18,745,103	- - - - - - - - -	9533	18,745,006 – 18,745,103	-	5	111	79.96	-2.41	0.58	0.951541
5944	2R_DroMel_CAF1	18,745,904 – 18,746,040	- - - - - - - - -	9534	18,745,904 – 18,746,002	+	5	99	88.31	-1.96	0.77	0.864415
				9535	18,745,904 – 18,746,002	-	5	99	88.31	-1.82	0.72	0.638300
				9536	18,745,943 – 18,746,040	+	5	98	77.29	-3.01	0.61	0.998881
				9537	18,745,943 – 18,746,040	-	5	98	77.29	-2.50	0.79	0.995707
5945	2R_DroMel_CAF1	18,747,742 – 18,747,845	- - - - - - - - -	9538	18,747,742 – 18,747,845	+	5	109	77.60	-2.00	0.50	0.772080
5945	2R_DroMel_CAF1	18,747,742 – 18,747,845	- - - - - - - - -	9539	18,747,742 – 18,747,845	-	5	109	77.60	-3.12	0.57	0.999011
5946	2R_DroMel_CAF1	18,750,439 – 18,750,546	- - - - - - - - -	9540	18,750,439 – 18,750,546	+	6	113	77.45	-1.50	0.62	0.707057
5947	2R_DroMel_CAF1	18,754,905 – 18,755,025	- - - "knownCDS=Parent=FBtr0072049;Name=CG9871-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9871-RA" - - - - -	9541	18,754,905 – 18,755,025	+	5	120	76.83	-1.89	0.57	0.801504
5948	2R_DroMel_CAF1	18,758,307 – 18,758,405	- - - - - - - - -	9542	18,758,307 – 18,758,405	-	4	104	83.33	-2.49	0.62	0.905118
5949	2R_DroMel_CAF1	18,765,185 – 18,765,366	- - - - - - - - -	9543	18,765,185 – 18,765,298	+	5	120	85.49	-3.29	0.80	0.998226
				9544	18,765,185 – 18,765,298	-	5	120	85.49	-1.62	0.70	0.520624
				9545	18,765,225 – 18,765,337	+	5	119	89.11	-5.44	0.79	0.998102
				9546	18,765,225 – 18,765,337	-	5	119	89.11	-3.05	0.71	0.935366
				9547	18,765,258 – 18,765,366	+	5	108	84.72	-1.81	0.82	0.820865
5950	2R_DroMel_CAF1	18,765,570 – 18,765,686	- - - - - - - - -	9548	18,765,570 – 18,765,686	-	6	117	95.24	-1.43	0.89	0.829492
5951	2R_DroMel_CAF1	18,766,555 – 18,766,654	- - - - - - - - -	9549	18,766,555 – 18,766,654	+	5	108	86.74	-1.73	0.73	0.627283
5952	2R_DroMel_CAF1	18,767,547 – 18,767,640	- - - - - - - - -	9550	18,767,547 – 18,767,640	-	5	111	79.30	-1.89	0.49	0.519406
5953	2R_DroMel_CAF1	18,768,069 – 18,768,176	- - - - - - - - -	9551	18,768,069 – 18,768,176	+	5	107	95.23	-1.26	0.90	0.709391
5954	2R_DroMel_CAF1	18,769,802 – 18,769,900	- - - - - - - - -	9552	18,769,802 – 18,769,900	+	6	109	81.72	-2.03	0.59	0.610797
5955	2R_DroMel_CAF1	18,771,188 – 18,771,304	- - - - - - - - -	9553	18,771,188 – 18,771,284	-	6	115	80.89	-1.60	0.84	0.809775
5955	2R_DroMel_CAF1	18,771,188 – 18,771,304	- - - - - - - - -	9554	18,771,209 – 18,771,304	-	6	113	80.89	-1.32	0.75	0.643047
5956	2R_DroMel_CAF1	18,771,354 – 18,771,461	- - - - - - - - -	9555	18,771,354 – 18,771,461	-	6	114	91.85	-1.81	0.86	0.836568
5957	2R_DroMel_CAF1	18,774,014 – 18,774,129	- - - - - - - - -	9556	18,774,014 – 18,774,129	+	5	119	77.46	-1.88	0.54	0.707560
5957	2R_DroMel_CAF1	18,774,014 – 18,774,129	- - - - - - - - -	9557	18,774,014 – 18,774,129	-	5	119	77.46	-2.74	0.52	0.995331
5958	2R_DroMel_CAF1	18,775,394 – 18,775,501	- - - - - - - - -	9558	18,775,394 – 18,775,501	+	5	107	92.15	-2.21	0.84	0.991302
5959	2R_DroMel_CAF1	18,777,302 – 18,777,411	- - - - - - - - -	9559	18,777,302 – 18,777,411	+	5	117	81.20	-1.76	0.74	0.766063
5959	2R_DroMel_CAF1	18,777,302 – 18,777,411	- - - - - - - - -	9560	18,777,302 – 18,777,411	-	5	117	81.20	-2.59	0.41	0.845507
5960	2R_DroMel_CAF1	18,777,711 – 18,777,803	- - - - - - - - -	9561	18,777,711 – 18,777,803	-	5	92	90.71	-2.31	0.87	0.997860
5961	2R_DroMel_CAF1	18,779,703 – 18,779,823	- - - "knownCDS=Parent=FBtr0072047;Name=ord-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3134-RA" - - - - -	9562	18,779,703 – 18,779,823	-	6	120	78.94	-2.67	0.56	0.956893
5962	2R_DroMel_CAF1	18,780,126 – 18,780,240	- - - "knownCDS=Parent=FBtr0072047;Name=ord-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3134-RA" - - - - -	9563	18,780,126 – 18,780,240	+	6	114	82.57	-2.47	0.58	0.637443
5962	2R_DroMel_CAF1	18,780,126 – 18,780,240		9564	18,780,126 – 18,780,240	-	6	114	82.57	-2.55	0.61	0.721330
5963	2R_DroMel_CAF1	18,782,917 – 18,783,021	- - - - - - - - -	9565	18,782,917 – 18,783,021	-	6	109	81.70	-2.52	0.61	0.815803
5964	2R_DroMel_CAF1	18,794,792 – 18,794,888	- - - - - - - - -	9566	18,794,792 – 18,794,888	+	3	105	82.96	-1.84	0.76	0.717421
5964	2R_DroMel_CAF1	18,794,792 – 18,794,888	- - - - - - - - -	9567	18,794,792 – 18,794,888	-	3	105	82.96	-1.68	0.87	0.848775
5965	2R_DroMel_CAF1	18,795,414 – 18,795,545	- - - - - - - - -	9568	18,795,414 – 18,795,512	+	6	120	75.86	-1.64	0.68	0.929712
5965	2R_DroMel_CAF1	18,795,414 – 18,795,545	- - - - - - - - -	9569	18,795,454 – 18,795,545	+	6	105	81.38	-1.97	0.65	0.737229
5966	2R_DroMel_CAF1	18,797,102 – 18,797,197	- - - - - - - - -	9570	18,797,102 – 18,797,197	-	6	95	91.11	-1.41	0.89	0.718274
5967	2R_DroMel_CAF1	18,798,850 – 18,798,952	- - - - - - - - -	9571	18,798,850 – 18,798,952	-	5	111	77.28	-2.15	0.47	0.887817
5968	2R_DroMel_CAF1	18,800,559 – 18,800,669	- - - - - - - - -	9572	18,800,559 – 18,800,669	+	4	118	88.60	-1.48	0.74	0.547068
5969	2R_DroMel_CAF1	18,801,208 – 18,801,304	- - - - - - - - -	9573	18,801,208 – 18,801,304	+	5	110	74.33	-2.28	0.48	0.980709
5969	2R_DroMel_CAF1	18,801,208 – 18,801,304	- - - - - - - - -	9574	18,801,208 – 18,801,304	-	5	110	74.33	-1.70	0.49	0.506349
5970	2R_DroMel_CAF1	18,801,874 – 18,801,966	- - - - - - - - -	9575	18,801,874 – 18,801,966	+	6	118	76.10	-1.36	0.64	0.698072
5971	2R_DroMel_CAF1	18,803,196 – 18,803,292	- - - - - - - - -	9576	18,803,196 – 18,803,292	-	6	96	93.68	-2.94	0.85	0.990935
5972	2R_DroMel_CAF1	18,805,453 – 18,805,558	- - - - - - - - -	9577	18,805,453 – 18,805,558	+	5	111	77.60	-1.92	0.62	0.865294
5973	2R_DroMel_CAF1	18,806,394 – 18,806,528	- - - - - - - - -	9578	18,806,394 – 18,806,492	-	5	104	82.60	-2.80	0.62	0.965479
				9579	18,806,434 – 18,806,528	+	5	100	73.34	-1.72	0.47	0.564959
				9580	18,806,434 – 18,806,528	-	5	100	73.34	-2.39	0.34	0.991332
5974	2R_DroMel_CAF1	18,808,388 – 18,808,585	- - - - - - - - -	9581	18,808,388 – 18,808,506	+	3	118	97.74	-1.93	0.98	0.859231
				9582	18,808,388 – 18,808,506	-	3	118	97.74	-1.49	0.99	0.619274
				9583	18,808,428 – 18,808,546	+	3	118	98.31	-1.94	0.98	0.862482
				9584	18,808,466 – 18,808,585	-	3	119	100.00	-1.38	1.00	0.578452
5975	2R_DroMel_CAF1	18,808,683 – 18,808,791	- - - - - - - - -	9585	18,808,683 – 18,808,791	+	3	108	92.38	-2.82	0.89	0.954744
5975	2R_DroMel_CAF1	18,808,683 – 18,808,791	- - - - - - - - -	9586	18,808,683 – 18,808,791	-	3	108	92.38	-2.39	0.95	0.965963
5976	2R_DroMel_CAF1	18,808,831 – 18,808,951	- - - - - - - - -	9587	18,808,831 – 18,808,951	+	3	120	81.27	-1.93	0.67	0.748480
5977	2R_DroMel_CAF1	18,809,621 – 18,809,732	- - - - - - - - -	9588	18,809,621 – 18,809,732	+	5	111	97.66	-1.59	0.85	0.699997
5977	2R_DroMel_CAF1	18,809,621 – 18,809,732	- - - - - - - - -	9589	18,809,621 – 18,809,732	-	5	111	97.66	-1.84	0.90	0.972531
5978	2R_DroMel_CAF1	18,810,233 – 18,810,345	- - - - - - - - -	9590	18,810,233 – 18,810,345	-	6	116	93.08	-1.74	0.87	0.855226
5979	2R_DroMel_CAF1	18,811,370 – 18,811,484	- - - - - - - - -	9591	18,811,370 – 18,811,484	+	5	114	99.65	-3.95	1.00	0.999671
5979	2R_DroMel_CAF1	18,811,370 – 18,811,484	- - - - - - - - -	9592	18,811,370 – 18,811,484	-	5	114	99.65	-3.51	0.99	0.999747
5980	2R_DroMel_CAF1	18,811,716 – 18,811,808	- - - - - - - - -	9593	18,811,716 – 18,811,808	+	6	120	78.95	-1.55	0.66	0.766763
5981	2R_DroMel_CAF1	18,812,854 – 18,812,956	- - - - - - - - -	9594	18,812,854 – 18,812,956	+	6	120	76.64	-2.25	0.38	0.626153
5982	2R_DroMel_CAF1	18,813,488 – 18,813,598	- - - - - - - - -	9595	18,813,488 – 18,813,598	+	5	111	76.60	-1.93	0.64	0.915068
5983	2R_DroMel_CAF1	18,814,243 – 18,814,342	- - - - - - - - -	9596	18,814,243 – 18,814,342	+	6	110	70.75	-2.48	0.47	0.993172
5983	2R_DroMel_CAF1	18,814,243 – 18,814,342	- - - - - - - - -	9597	18,814,243 – 18,814,342	-	6	110	70.75	-1.92	0.45	0.879163
5984	2R_DroMel_CAF1	18,817,552 – 18,817,670	- - "RNAmicro=f:18817552_t:18817669_strand:+_p:0.664409" - - - - - -	9598	18,817,552 – 18,817,670	+	4	118	84.35	-2.62	0.70	0.962724
5985	2R_DroMel_CAF1	18,818,136 – 18,818,240	- - - - - - - - -	9599	18,818,136 – 18,818,240	+	5	111	70.35	-1.98	0.44	0.918450
5986	2R_DroMel_CAF1	18,820,403 – 18,820,502	- - - - - - - - -	9600	18,820,403 – 18,820,502	+	6	115	80.93	-1.88	0.65	0.747913
5987	2R_DroMel_CAF1	18,821,949 – 18,822,051	- - - - - - - - -	9601	18,821,949 – 18,822,051	-	6	103	89.15	-1.82	0.93	0.967341
5988	2R_DroMel_CAF1	18,823,907 – 18,824,049	- - - - - - - - -	9602	18,823,907 – 18,824,014	-	5	107	82.24	-1.73	0.69	0.649978
				9603	18,823,946 – 18,824,049	+	6	106	81.73	-1.44	0.72	0.614155
				9604	18,823,946 – 18,824,049	-	6	106	81.73	-2.32	0.72	0.868614
5989	2R_DroMel_CAF1	18,824,406 – 18,824,502	- - - - - - - - -	9605	18,824,406 – 18,824,502	+	6	107	76.59	-1.09	0.69	0.628567
5990	2R_DroMel_CAF1	18,830,143 – 18,830,251	- - - "knownCDS=Parent=FBtr0072042;Name=CG30416-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30416-RA" - - - - -	9606	18,830,143 – 18,830,251	+	5	120	80.85	-1.92	0.53	0.525109
5991	2R_DroMel_CAF1	18,835,396 – 18,835,494	- - - - - - - - -	9607	18,835,396 – 18,835,494	+	6	102	77.87	-1.86	0.53	0.660776
5992	2R_DroMel_CAF1	18,837,720 – 18,837,840	- - - - - - - - -	9608	18,837,720 – 18,837,840	+	5	120	94.00	-1.57	0.82	0.776051
5992	2R_DroMel_CAF1	18,837,720 – 18,837,840	- - - - - - - - -	9609	18,837,720 – 18,837,840	-	5	120	94.00	-1.30	0.88	0.721729
5993	2R_DroMel_CAF1	18,842,498 – 18,842,592	- - - - - - - - -	9610	18,842,498 – 18,842,592	-	6	100	89.08	-1.60	0.89	0.780429
5994	2R_DroMel_CAF1	18,842,616 – 18,842,710	- - - - - - - - -	9611	18,842,616 – 18,842,710	+	6	99	78.18	-1.41	0.62	0.573367
5994	2R_DroMel_CAF1	18,842,616 – 18,842,710	- - - - - - - - -	9612	18,842,616 – 18,842,710	-	6	99	78.18	-1.92	0.66	0.916702
5995	2R_DroMel_CAF1	18,845,089 – 18,845,196	- - - - - - - - -	9613	18,845,089 – 18,845,196	-	6	117	79.14	-1.29	0.65	0.538421
5996	2R_DroMel_CAF1	18,846,997 – 18,847,169	- - - - - - - - -	9614	18,846,997 – 18,847,106	-	6	110	80.86	-1.96	0.71	0.846648
				9615	18,847,036 – 18,847,146	+	6	117	86.82	-2.28	0.80	0.713520
				9616	18,847,036 – 18,847,146	-	6	117	86.82	-2.84	0.75	0.677659
				9617	18,847,066 – 18,847,169	+	6	120	78.50	-2.37	0.71	0.966972
				9618	18,847,066 – 18,847,169	-	6	120	78.50	-1.84	0.58	0.762875
5997	2R_DroMel_CAF1	18,850,036 – 18,850,130	- - - - - - - - -	9619	18,850,036 – 18,850,130	+	5	94	93.17	-1.34	0.95	0.922004
5998	2R_DroMel_CAF1	18,851,074 – 18,851,189	- - - "knownCDS=Parent=FBtr0072039;Name=CG3502-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3502-RA" - - - - -	9620	18,851,074 – 18,851,189	-	6	120	72.87	-2.08	0.35	0.689774
5999	2R_DroMel_CAF1	18,856,516 – 18,856,615	- - - - - - - - -	9621	18,856,516 – 18,856,615	-	6	106	85.31	-2.29	0.73	0.556884
6000	2R_DroMel_CAF1	18,859,491 – 18,859,598	- - - "knownCDS=texon1817;Parent=CG_NCBI_GNO_32653578, CG_RGUI_GID_mRNA_40004365, CG_DGIL_SNO_28358100, CG_BATZ_CON_47005161" - - - - -	9622	18,859,491 – 18,859,598	-	6	119	80.09	-1.20	0.73	0.602622
6001	2R_DroMel_CAF1	18,861,193 – 18,861,303	- - - - - - - - -	9623	18,861,193 – 18,861,303	-	5	112	96.01	-1.12	0.93	0.596711
6002	2R_DroMel_CAF1	18,862,962 – 18,863,082	- - - "knownCDS=Parent=FBtr0072005;Name=CG30410-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30410-RA" - - - - -	9624	18,862,962 – 18,863,082	-	5	120	93.33	-1.42	0.82	0.651830
6003	2R_DroMel_CAF1	18,864,020 – 18,864,218	- - - "knownCDS=Parent=FBtr0072038;Name=CG3500-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3500-RA" - - - - -	9625	18,864,020 – 18,864,138	+	5	120	91.58	-2.38	0.85	0.996468
6003	2R_DroMel_CAF1	18,864,020 – 18,864,218		9626	18,864,098 – 18,864,218	+	5	120	95.00	-1.76	0.93	0.994143
6004	2R_DroMel_CAF1	18,864,415 – 18,864,607	- - - "knownCDS=Parent=FBtr0072038;Name=CG3500-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3500-RA" - - - - -	9627	18,864,415 – 18,864,527	-	5	120	81.38	-1.60	0.71	0.600345
				9628	18,864,447 – 18,864,567	+	5	120	92.92	-1.95	0.76	0.747487
				9629	18,864,447 – 18,864,567	-	5	120	92.92	-1.70	0.89	0.979117
				9630	18,864,487 – 18,864,607	+	4	120	95.97	-2.03	0.88	0.827167
				9631	18,864,487 – 18,864,607	-	4	120	95.97	-1.99	0.91	0.867524
6005	2R_DroMel_CAF1	18,864,920 – 18,865,030	- - - - - - - - -	9632	18,864,920 – 18,865,030	+	5	120	79.55	-2.11	0.66	0.926392
6006	2R_DroMel_CAF1	18,865,225 – 18,865,324	- - - - - - - - -	9633	18,865,225 – 18,865,324	+	5	120	77.69	-1.50	0.71	0.709702
6006	2R_DroMel_CAF1	18,865,225 – 18,865,324	- - - - - - - - -	9634	18,865,225 – 18,865,324	-	5	120	77.69	-1.50	0.77	0.816220
6007	2R_DroMel_CAF1	18,866,636 – 18,866,776	- - - "knownCDS=Parent=FBtr0072007;Name=CG11079-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11079-RA" - - - - -	9635	18,866,636 – 18,866,746	-	6	112	79.32	-1.61	0.58	0.521576
6007	2R_DroMel_CAF1	18,866,636 – 18,866,776		9636	18,866,676 – 18,866,776	-	5	100	86.10	-1.52	0.75	0.509563
6008	2R_DroMel_CAF1	18,869,908 – 18,870,059	- - - "knownCDS=Parent=FBtr0072037;Name=vir-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3496-RA" - - - - -	9637	18,869,908 – 18,870,028	+	6	120	81.94	-1.98	0.63	0.654273
6008	2R_DroMel_CAF1	18,869,908 – 18,870,059		9638	18,869,948 – 18,870,059	+	6	116	83.08	-2.32	0.69	0.732610
6009	2R_DroMel_CAF1	18,874,971 – 18,875,131	- - - "knownCDS=Parent=FBtr0072010;Name=CG13550-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13550-RA" - - - - -	9639	18,874,971 – 18,875,091	+	4	120	91.67	-1.76	0.87	0.832798
				9640	18,874,971 – 18,875,091	-	4	120	91.67	-1.97	0.84	0.874845
				9641	18,875,011 – 18,875,131	+	5	120	92.17	-1.37	0.83	0.650043
6010	2R_DroMel_CAF1	18,875,848 – 18,875,968	- - - "knownCDS=Parent=FBtr0072010;Name=CG13550-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13550-RA" - - - - -	9642	18,875,848 – 18,875,968	+	5	120	91.92	-1.44	0.87	0.829971
6011	2R_DroMel_CAF1	18,883,928 – 18,884,030	- - - "knownCDS=Parent=FBtr0072036;Name=CG3493-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3493-RA" - - - - -	9643	18,883,928 – 18,884,030	+	6	117	77.33	-1.76	0.63	0.871985
6012	2R_DroMel_CAF1	18,890,485 – 18,890,597	- - - - - - - - -	9644	18,890,485 – 18,890,597	-	5	120	91.67	-1.32	0.86	0.664587
6013	2R_DroMel_CAF1	18,892,848 – 18,892,961	- - - - - - - - -	9645	18,892,848 – 18,892,961	-	5	120	82.65	-2.69	0.51	0.857364
6014	2R_DroMel_CAF1	18,894,738 – 18,894,851	- - - "knownCDS=Parent=FBtr0072015;Name=eIF2B-delta-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10315-RB" - - - - -	9646	18,894,738 – 18,894,851	-	4	113	89.79	-1.81	0.76	0.718733
6015	2R_DroMel_CAF1	18,898,947 – 18,899,051	- - - - - - - - -	9647	18,898,947 – 18,899,051	-	6	114	76.34	-1.36	0.60	0.545179
6016	2R_DroMel_CAF1	18,899,446 – 18,899,551	- - - - - - - - -	9648	18,899,446 – 18,899,551	+	6	105	79.28	-1.94	0.69	0.903994
6017	2R_DroMel_CAF1	18,902,090 – 18,902,183	- - - - - - - - -	9649	18,902,090 – 18,902,183	+	6	97	85.58	-2.42	0.73	0.569250
6018	2R_DroMel_CAF1	18,917,940 – 18,918,031	- - - - - - - - -	9650	18,917,940 – 18,918,031	+	5	101	84.30	-1.60	0.71	0.530110
6018	2R_DroMel_CAF1	18,917,940 – 18,918,031	- - - - - - - - -	9651	18,917,940 – 18,918,031	-	5	101	84.30	-1.74	0.68	0.582338
6019	2R_DroMel_CAF1	18,920,276 – 18,920,370	- - - - - - - - -	9652	18,920,276 – 18,920,370	-	6	101	72.84	-1.90	0.60	0.964562
6020	2R_DroMel_CAF1	18,921,430 – 18,921,529	- - - - - - - - -	9653	18,921,430 – 18,921,529	-	6	118	79.16	-1.90	0.56	0.682307
6021	2R_DroMel_CAF1	18,929,798 – 18,929,897	- - - "knownCDS=Parent=FBtr0072024;Name=CG9815-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9815-RA" - - - - -	9654	18,929,798 – 18,929,897	+	6	107	79.69	-1.52	0.70	0.772543
6022	2R_DroMel_CAF1	18,933,038 – 18,933,130	- - - - - - - - -	9655	18,933,038 – 18,933,130	+	5	92	92.41	-2.61	0.86	0.998927
6023	2R_DroMel_CAF1	18,933,752 – 18,933,887	- - - - - - - - -	9656	18,933,752 – 18,933,857	-	5	109	87.52	-1.55	0.75	0.543039
				9657	18,933,781 – 18,933,887	+	5	120	84.32	-2.25	0.61	0.705746
				9658	18,933,781 – 18,933,887	-	5	120	84.32	-1.66	0.71	0.578530
6024	2R_DroMel_CAF1	18,936,947 – 18,937,043	- - - - - - - - -	9659	18,936,947 – 18,937,043	-	3	100	80.21	-2.13	0.58	0.585637
6025	2R_DroMel_CAF1	18,937,152 – 18,937,251	- - "RNAmicro=f:18937152_t:18937261_strand:+_p:0.955153" - - - - - -	9660	18,937,152 – 18,937,251	+	4	110	87.56	-1.36	0.81	0.500000
6026	2R_DroMel_CAF1	18,943,359 – 18,943,461	- - - - - - - - -	9661	18,943,359 – 18,943,461	-	5	104	81.36	-2.10	0.69	0.899683
6027	2R_DroMel_CAF1	18,950,677 – 18,950,791	- - - - - - - - -	9662	18,950,677 – 18,950,767	-	6	108	76.81	-1.62	0.54	0.539095
6027	2R_DroMel_CAF1	18,950,677 – 18,950,791	- - - - - - - - -	9663	18,950,695 – 18,950,791	+	6	107	80.51	-1.08	0.75	0.515265
6028	2R_DroMel_CAF1	18,953,441 – 18,953,540	- - - - - - - - -	9664	18,953,441 – 18,953,540	-	5	101	77.68	-3.39	0.42	0.999318
6029	2R_DroMel_CAF1	18,971,532 – 18,971,632	- - - - - - - - -	9665	18,971,532 – 18,971,632	-	6	100	94.40	-1.08	0.91	0.599445
6030	2R_DroMel_CAF1	18,973,045 – 18,973,154	- - - - - - - - -	9666	18,973,045 – 18,973,154	-	4	109	80.65	-1.67	0.72	0.683707
6031	2R_DroMel_CAF1	18,981,790 – 18,981,890	- - - - - - - - -	9667	18,981,790 – 18,981,890	+	6	108	74.03	-1.59	0.67	0.934875
6031	2R_DroMel_CAF1	18,981,790 – 18,981,890	- - - - - - - - -	9668	18,981,790 – 18,981,890	-	6	108	74.03	-1.72	0.64	0.943169
6032	2R_DroMel_CAF1	18,985,212 – 18,985,311	- - - - - - - - -	9669	18,985,212 – 18,985,311	-	5	111	86.21	-1.70	0.75	0.651852
6033	2R_DroMel_CAF1	18,986,259 – 18,986,351	- - - - - - - - -	9670	18,986,259 – 18,986,351	-	4	100	80.56	-2.02	0.68	0.884317
6034	2R_DroMel_CAF1	18,989,269 – 18,989,371	- - - - - - - - -	9671	18,989,269 – 18,989,371	+	3	102	97.39	-1.73	0.93	0.635299
6035	2R_DroMel_CAF1	18,991,122 – 18,991,213	- - - - - - - - -	9672	18,991,122 – 18,991,213	+	4	94	83.21	-1.86	0.71	0.783200
6036	2R_DroMel_CAF1	18,993,774 – 18,993,898	- - - - - - - - -	9673	18,993,774 – 18,993,868	+	6	112	77.77	-2.11	0.48	0.709326
				9674	18,993,774 – 18,993,868	-	6	112	77.77	-1.97	0.47	0.509624
				9675	18,993,800 – 18,993,898	+	6	114	81.98	-1.91	0.78	0.818344
				9676	18,993,800 – 18,993,898	-	6	114	81.98	-1.75	0.64	0.580050
6037	2R_DroMel_CAF1	18,995,533 – 18,995,642	- - - - - - - - -	9677	18,995,533 – 18,995,642	-	3	109	64.47	-1.21	0.58	0.604826
6038	2R_DroMel_CAF1	18,995,670 – 18,995,765	- - - - - - - - -	9678	18,995,670 – 18,995,765	-	5	120	75.14	-1.69	0.29	0.527505
6039	2R_DroMel_CAF1	18,997,156 – 18,997,263	- - - - - - - - -	9679	18,997,156 – 18,997,263	+	5	107	86.82	-1.62	0.70	0.500000
6040	2R_DroMel_CAF1	18,998,139 – 18,998,229	- - - "knownCDS=Parent=FBtr0072055;Name=CG13556-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13556-RA" - - - - -	9680	18,998,139 – 18,998,229	+	6	96	83.19	-1.77	0.69	0.558213
6040	2R_DroMel_CAF1	18,998,139 – 18,998,229		9681	18,998,139 – 18,998,229	-	6	96	83.19	-3.14	0.60	0.784325
6041	2R_DroMel_CAF1	19,000,778 – 19,000,883	- - - - - - - - -	9682	19,000,778 – 19,000,883	+	5	105	98.10	-1.26	0.97	0.768303
6042	2R_DroMel_CAF1	19,004,502 – 19,004,617	- - - - - - - - -	9683	19,004,502 – 19,004,617	+	5	118	93.12	-1.69	0.80	0.797501
6043	2R_DroMel_CAF1	19,010,884 – 19,011,043	- - - "knownCDS=Parent=FBtr0072057;Name=CG13559-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13559-RA" - - - - -	9684	19,010,884 – 19,011,003	+	3	120	73.01	-2.18	0.77	0.999681
				9685	19,010,884 – 19,011,003	-	3	120	73.01	-2.14	0.76	0.999515
				9686	19,010,923 – 19,011,043	+	4	120	77.36	-1.87	0.69	0.887433
				9687	19,010,923 – 19,011,043	-	4	120	77.36	-1.63	0.67	0.628223
6044	2R_DroMel_CAF1	19,018,775 – 19,018,868	- - - - - - - - -	9688	19,018,775 – 19,018,868	+	5	105	58.54	-1.22	0.51	0.627607
6044	2R_DroMel_CAF1	19,018,775 – 19,018,868	- - - - - - - - -	9689	19,018,775 – 19,018,868	-	5	105	58.54	-1.10	0.55	0.556720
6045	2R_DroMel_CAF1	19,021,619 – 19,021,745	- - - - - - - - -	9690	19,021,619 – 19,021,714	-	6	103	70.29	-1.81	0.42	0.721571
6045	2R_DroMel_CAF1	19,021,619 – 19,021,745	- - - - - - - - -	9691	19,021,651 – 19,021,745	-	6	103	72.56	-1.59	0.55	0.748868
6046	2R_DroMel_CAF1	19,026,999 – 19,027,107	- - - - - - - - -	9692	19,026,999 – 19,027,107	-	3	108	94.44	-2.07	1.00	0.954088
6047	2R_DroMel_CAF1	19,029,540 – 19,029,632	- - - - - - - - -	9693	19,029,540 – 19,029,632	+	6	105	71.40	-2.29	0.31	0.871894
6048	2R_DroMel_CAF1	19,031,606 – 19,031,696	- - - - - - - - -	9694	19,031,606 – 19,031,696	-	6	103	79.93	-1.51	0.62	0.575277
6049	2R_DroMel_CAF1	19,032,979 – 19,033,092	- - - "knownCDS=Parent=FBtr0072058;Name=CG5360-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5360-RA" - - - - -	9695	19,032,979 – 19,033,092	+	6	113	77.46	-1.69	0.56	0.632513
6050	2R_DroMel_CAF1	19,034,241 – 19,034,333	- - - "knownCDS=Parent=FBtr0072058;Name=CG5360-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5360-RA" - - - - -	9696	19,034,241 – 19,034,333	-	6	94	79.48	-1.34	0.69	0.671484
6051	2R_DroMel_CAF1	19,046,733 – 19,046,853	- - - "knownCDS=Parent=FBtr0072116;Name=CG30181-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30181-RA" - - - - -	9697	19,046,733 – 19,046,853	-	6	120	82.83	-2.36	0.57	0.531863
6052	2R_DroMel_CAF1	19,050,425 – 19,050,537	- - - "knownCDS=Parent=FBtr0072059;Name=Gr59f-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33150-RA" - - - - -	9698	19,050,425 – 19,050,537	-	6	112	80.48	-1.35	0.65	0.517038
6053	2R_DroMel_CAF1	19,050,657 – 19,050,760	- - - "knownCDS=Parent=FBtr0072059;Name=Gr59f-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33150-RA" - - - - -	9699	19,050,657 – 19,050,760	+	6	103	79.35	-1.20	0.69	0.587032
6054	2R_DroMel_CAF1	19,054,430 – 19,054,520	- - - - - - - - -	9700	19,054,430 – 19,054,520	+	4	92	90.86	-2.43	0.73	0.781228
6054	2R_DroMel_CAF1	19,054,430 – 19,054,520	- - - - - - - - -	9701	19,054,430 – 19,054,520	-	4	92	90.86	-2.98	0.80	0.967123
6055	2R_DroMel_CAF1	19,058,851 – 19,058,941	- - - - - - - - -	9702	19,058,851 – 19,058,941	+	5	97	84.09	-1.81	0.69	0.657203
6055	2R_DroMel_CAF1	19,058,851 – 19,058,941	- - - - - - - - -	9703	19,058,851 – 19,058,941	-	5	97	84.09	-1.61	0.75	0.596088
6056	2R_DroMel_CAF1	19,060,707 – 19,060,814	- - - - - - - - -	9704	19,060,707 – 19,060,814	-	6	107	86.67	-1.58	0.92	0.843723
6057	2R_DroMel_CAF1	19,061,586 – 19,061,704	- - - - - - - - -	9705	19,061,586 – 19,061,682	+	6	108	70.38	-1.82	0.36	0.546546
6057	2R_DroMel_CAF1	19,061,586 – 19,061,704	- - - - - - - - -	9706	19,061,609 – 19,061,704	+	6	98	72.20	-1.74	0.50	0.779271
6058	2R_DroMel_CAF1	19,061,837 – 19,061,948	- - - "knownCDS=Parent=FBtr0072112;Name=pita-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3941-RA" - - - - -	9707	19,061,837 – 19,061,948	-	6	115	79.79	-2.28	0.78	0.944722
6059	2R_DroMel_CAF1	19,063,842 – 19,063,974	- - - - - - - - -	9708	19,063,842 – 19,063,941	+	5	99	82.50	-2.35	0.65	0.915275
				9709	19,063,842 – 19,063,941	-	5	99	82.50	-2.60	0.68	0.966309
				9710	19,063,873 – 19,063,974	+	5	103	78.91	-2.75	0.73	0.996167
				9711	19,063,873 – 19,063,974	-	5	103	78.91	-2.01	0.70	0.932477
6060	2R_DroMel_CAF1	19,067,071 – 19,067,173	- - - "knownCDS=Parent=FBtr0072063;Name=alphaPS5-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5372-RA" - - - - -	9712	19,067,071 – 19,067,173	-	4	120	79.43	-1.82	0.71	0.813144
6061	2R_DroMel_CAF1	19,068,020 – 19,068,120	- - - - - - - - -	9713	19,068,020 – 19,068,120	-	4	102	87.46	-1.69	0.71	0.638326
6062	2R_DroMel_CAF1	19,069,093 – 19,069,190	- - - "knownCDS=Parent=FBtr0072064;Name=Pi3K59F-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5373-RA" - - - - -	9714	19,069,093 – 19,069,190	+	6	116	76.42	-1.87	0.73	0.965921
6063	2R_DroMel_CAF1	19,075,232 – 19,075,327	- - - - - - - - -	9715	19,075,232 – 19,075,327	-	3	97	81.43	-1.97	0.77	0.871477
6064	2R_DroMel_CAF1	19,078,191 – 19,078,293	- - - - - - - - -	9716	19,078,191 – 19,078,293	-	6	119	79.18	-2.18	0.60	0.895111
6065	2R_DroMel_CAF1	19,084,888 – 19,084,985	- - - - - - - - -	9717	19,084,888 – 19,084,985	+	3	100	81.67	-2.05	0.75	0.880227
6065	2R_DroMel_CAF1	19,084,888 – 19,084,985	- - - - - - - - -	9718	19,084,888 – 19,084,985	-	3	100	81.67	-2.02	0.69	0.796780
6066	2R_DroMel_CAF1	19,094,684 – 19,094,784	- - - - - - - - -	9719	19,094,684 – 19,094,784	-	6	111	82.86	-1.58	0.80	0.649704
6067	2R_DroMel_CAF1	19,099,975 – 19,100,070	- - - - - - - - -	9720	19,099,975 – 19,100,070	+	6	119	71.99	-2.07	0.41	0.879592
6068	2R_DroMel_CAF1	19,103,088 – 19,103,218	- - - - - - - - -	9721	19,103,088 – 19,103,180	+	5	95	87.94	-2.10	0.67	0.582495
6068	2R_DroMel_CAF1	19,103,088 – 19,103,218	- - - - - - - - -	9722	19,103,108 – 19,103,218	+	6	114	80.77	-2.04	0.58	0.686469
6069	2R_DroMel_CAF1	19,103,458 – 19,103,563	- - - - - - - - -	9723	19,103,458 – 19,103,563	-	5	111	77.28	-1.88	0.24	0.735992
6070	2R_DroMel_CAF1	19,106,211 – 19,106,307	- - - - - - - - -	9724	19,106,211 – 19,106,307	+	6	101	80.31	-2.32	0.57	0.828387
6071	2R_DroMel_CAF1	19,108,029 – 19,108,132	- - - "knownCDS=Parent=FBtr0072110;Name=CG30182-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30182-RA" - - - - -	9725	19,108,029 – 19,108,132	+	3	103	94.82	-1.50	0.95	0.560151
6072	2R_DroMel_CAF1	19,109,939 – 19,110,033	- - - - - - - - -	9726	19,109,939 – 19,110,033	-	5	94	87.13	-1.78	0.79	0.802412
6073	2R_DroMel_CAF1	19,115,215 – 19,115,363	- - - - - - - - -	9727	19,115,215 – 19,115,331	+	3	116	82.99	-2.06	0.69	0.739264
				9728	19,115,215 – 19,115,331	-	3	116	82.99	-1.71	0.72	0.574909
				9729	19,115,252 – 19,115,363	-	3	111	83.44	-1.72	0.77	0.619384
6074	2R_DroMel_CAF1	19,115,863 – 19,116,063	- - - "knownCDS=Parent=FBtr0072105;Name=CG4019-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4019-RC" - - - - -	9730	19,115,863 – 19,115,983	-	6	120	78.00	-2.11	0.46	0.594840
				9731	19,115,903 – 19,116,023	+	6	120	77.56	-2.71	0.44	0.940190
				9732	19,115,903 – 19,116,023	-	6	120	77.56	-2.40	0.50	0.925905
				9733	19,115,943 – 19,116,063	-	6	120	80.28	-1.59	0.60	0.510385
6075	2R_DroMel_CAF1	19,118,255 – 19,118,376	- - - - - - - - -	9734	19,118,255 – 19,118,345	+	5	102	66.67	-1.93	0.38	0.770683
6075	2R_DroMel_CAF1	19,118,255 – 19,118,376	- - - - - - - - -	9735	19,118,281 – 19,118,376	-	6	100	72.20	-1.82	0.41	0.588001
6076	2R_DroMel_CAF1	19,122,935 – 19,123,036	- - - - - - - - -	9736	19,122,935 – 19,123,036	-	6	111	70.12	-1.88	0.39	0.744598
6077	2R_DroMel_CAF1	19,125,682 – 19,125,818	- - - - - - - - -	9737	19,125,682 – 19,125,799	+	5	117	85.55	-1.74	0.72	0.633076
				9738	19,125,682 – 19,125,799	-	5	117	85.55	-2.51	0.69	0.904603
				9739	19,125,722 – 19,125,818	+	5	96	79.33	-2.28	0.60	0.942234
				9740	19,125,722 – 19,125,818	-	5	96	79.33	-2.38	0.68	0.978013
6078	2R_DroMel_CAF1	19,130,669 – 19,130,760	- - - - - - - - -	9741	19,130,669 – 19,130,760	+	6	96	76.97	-3.45	0.55	0.996336
6078	2R_DroMel_CAF1	19,130,669 – 19,130,760	- - - - - - - - -	9742	19,130,669 – 19,130,760	-	6	96	76.97	-2.83	0.49	0.984206
6079	2R_DroMel_CAF1	19,133,181 – 19,133,276	- - - - - - - - -	9743	19,133,181 – 19,133,276	-	6	101	70.96	-1.99	0.38	0.789608
6080	2R_DroMel_CAF1	19,136,744 – 19,136,869	- - - - - - - - -	9744	19,136,744 – 19,136,844	-	6	103	83.93	-2.68	0.77	0.859150
6080	2R_DroMel_CAF1	19,136,744 – 19,136,869	- - - - - - - - -	9745	19,136,778 – 19,136,869	-	6	109	78.24	-1.86	0.57	0.758240
6081	2R_DroMel_CAF1	19,138,910 – 19,139,006	- - - - - - - - -	9746	19,138,910 – 19,139,006	+	6	114	77.62	-1.40	0.68	0.782088
6082	2R_DroMel_CAF1	19,140,571 – 19,140,661	- - - - - - - - -	9747	19,140,571 – 19,140,661	-	5	91	86.46	-2.38	0.71	0.885655
6083	2R_DroMel_CAF1	19,148,206 – 19,148,309	- - - - - - - - -	9748	19,148,206 – 19,148,309	+	6	120	80.04	-2.11	0.68	0.898212
6083	2R_DroMel_CAF1	19,148,206 – 19,148,309	- - - - - - - - -	9749	19,148,206 – 19,148,309	-	6	120	80.04	-1.86	0.60	0.714523
6084	2R_DroMel_CAF1	19,148,767 – 19,148,860	- - - - - - - - -	9750	19,148,767 – 19,148,860	-	6	111	81.71	-1.48	0.65	0.518137
6085	2R_DroMel_CAF1	19,148,974 – 19,149,075	- - - - - - - - -	9751	19,148,974 – 19,149,075	+	6	114	80.57	-2.81	0.76	0.953017
6086	2R_DroMel_CAF1	19,150,315 – 19,150,421	- - - - - - - - -	9752	19,150,315 – 19,150,421	-	6	107	79.17	-0.89	0.79	0.500000
6087	2R_DroMel_CAF1	19,156,156 – 19,156,276	- - - - - - - - -	9753	19,156,156 – 19,156,276	-	3	120	87.78	-2.46	0.75	0.747149
6088	2R_DroMel_CAF1	19,159,818 – 19,159,912	- - - - - - - - -	9754	19,159,818 – 19,159,912	+	4	118	76.37	-2.66	0.55	0.987221
6088	2R_DroMel_CAF1	19,159,818 – 19,159,912	- - - - - - - - -	9755	19,159,818 – 19,159,912	-	4	118	76.37	-2.66	0.46	0.885710
6089	2R_DroMel_CAF1	19,160,329 – 19,160,443	- - - "knownCDS=Parent=FBtr0072072, FBtr0072073;Name=retn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5403-RA, FlyBase+Annotation+IDs:CG5403-RB" - - - - -	9756	19,160,329 – 19,160,443	-	5	115	94.59	-1.16	0.94	0.712442
6090	2R_DroMel_CAF1	19,160,622 – 19,160,712	- - - "knownCDS=Parent=FBtr0072072, FBtr0072073;Name=retn-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5403-RA, FlyBase+Annotation+IDs:CG5403-RB" - - - - -	9757	19,160,622 – 19,160,712	+	6	96	80.09	-1.81	0.59	0.657553
6090	2R_DroMel_CAF1	19,160,622 – 19,160,712		9758	19,160,622 – 19,160,712	-	6	96	80.09	-2.00	0.57	0.704406
6091	2R_DroMel_CAF1	19,165,974 – 19,166,064	- - - - - - - - -	9759	19,165,974 – 19,166,064	+	6	102	84.17	-1.68	0.74	0.507571
6092	2R_DroMel_CAF1	19,167,958 – 19,168,049	- - - - - - - - -	9760	19,167,958 – 19,168,049	+	4	91	96.70	-2.80	0.94	0.976054
6093	2R_DroMel_CAF1	19,168,597 – 19,168,695	- - - - - - - - -	9761	19,168,597 – 19,168,695	-	6	117	74.26	-1.95	0.39	0.527043
6094	2R_DroMel_CAF1	19,170,831 – 19,170,921	- - - - - - - - -	9762	19,170,831 – 19,170,921	+	6	107	79.46	-1.62	0.58	0.509948
6095	2R_DroMel_CAF1	19,171,041 – 19,171,225	- - "RNAmicro=f:19171077_t:19171196_strand:-_p:0.623525" - - - - - -	9763	19,171,041 – 19,171,145	-	4	120	82.95	-2.79	0.82	0.994599
				9764	19,171,077 – 19,171,185	+	4	120	78.25	-1.61	0.67	0.585719
				9765	19,171,077 – 19,171,185	-	4	120	78.25	-3.59	0.79	0.999895
				9766	19,171,105 – 19,171,225	-	4	120	78.30	-2.12	0.61	0.902264
6096	2R_DroMel_CAF1	19,173,306 – 19,173,414	- - - "knownCDS=Parent=FBtr0072075, FBtr0072074;Name=Pde8-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5411-RE, FlyBase+Annotation+IDs:CG5411-RA" - - - - -	9767	19,173,306 – 19,173,414	+	6	120	75.90	-2.09	0.58	0.948682
6097	2R_DroMel_CAF1	19,178,812 – 19,178,919	- - - - - - - - -	9768	19,178,812 – 19,178,919	+	6	112	76.74	-2.47	0.38	0.805023
6098	2R_DroMel_CAF1	19,178,993 – 19,179,089	- - - - - - - - -	9769	19,178,993 – 19,179,089	-	5	113	77.13	-1.94	0.46	0.700836
6099	2R_DroMel_CAF1	19,199,573 – 19,199,690	- - - "knownCDS=Parent=FBtr0072099;Name=CG30183-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30183-RA" - - - - -	9770	19,199,573 – 19,199,690	+	6	120	81.13	-2.42	0.54	0.721185
6100	2R_DroMel_CAF1	19,200,824 – 19,200,942	- - - "knownCDS=Parent=FBtr0072099;Name=CG30183-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30183-RA" - - - - -	9771	19,200,824 – 19,200,942	+	5	118	81.69	-1.87	0.59	0.573149
6101	2R_DroMel_CAF1	19,207,547 – 19,207,652	- - - "knownCDS=Parent=FBtr0072096, FBtr0072098;Name=CG4091-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4091-RA, FlyBase+Annotation+IDs:CG4091-RB" - - - - -	9772	19,207,547 – 19,207,652	-	6	106	75.42	-1.70	0.52	0.605592
6102	2R_DroMel_CAF1	19,207,772 – 19,207,867	- - - "knownCDS=Parent=FBtr0072097;Name=CG4091-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4091-RC" - - - - -	9773	19,207,772 – 19,207,867	+	6	104	79.74	-1.35	0.79	0.759453
6103	2R_DroMel_CAF1	19,212,883 – 19,212,978	- - - - - - - - -	9774	19,212,883 – 19,212,978	-	6	101	83.32	-2.90	0.72	0.846386
6104	2R_DroMel_CAF1	19,218,548 – 19,218,653	- - - - - - - - -	9775	19,218,548 – 19,218,653	+	3	105	88.70	-1.25	0.95	0.625091
6105	2R_DroMel_CAF1	19,219,660 – 19,219,772	- - - - - - - - -	9776	19,219,660 – 19,219,772	-	6	118	83.57	-2.52	0.70	0.743157
6106	2R_DroMel_CAF1	19,219,978 – 19,220,092	- - - - - - - - -	9777	19,219,978 – 19,220,092	+	5	114	88.68	-1.26	0.91	0.561948
6107	2R_DroMel_CAF1	19,222,937 – 19,223,049	- - - - - - - - -	9778	19,222,937 – 19,223,049	-	5	118	85.11	-2.57	0.61	0.795030
6108	2R_DroMel_CAF1	19,225,448 – 19,225,541	- - - - - - - - -	9779	19,225,448 – 19,225,541	+	3	93	81.61	-3.16	0.74	0.993894
6108	2R_DroMel_CAF1	19,225,448 – 19,225,541	- - - - - - - - -	9780	19,225,448 – 19,225,541	-	3	93	81.61	-3.21	0.59	0.958365
6109	2R_DroMel_CAF1	19,226,148 – 19,226,255	- - - - - - - - -	9781	19,226,148 – 19,226,255	+	5	113	77.13	-2.16	0.59	0.948752
6109	2R_DroMel_CAF1	19,226,148 – 19,226,255	- - - - - - - - -	9782	19,226,148 – 19,226,255	-	5	113	77.13	-1.84	0.56	0.720265
6110	2R_DroMel_CAF1	19,228,504 – 19,228,622	- - - - - - - - -	9783	19,228,504 – 19,228,622	-	6	120	80.62	-2.43	0.59	0.858240
6111	2R_DroMel_CAF1	19,231,825 – 19,231,946	- - - - - - - - -	9784	19,231,825 – 19,231,915	+	6	107	77.52	-1.79	0.74	0.943500
6111	2R_DroMel_CAF1	19,231,825 – 19,231,946	- - - - - - - - -	9785	19,231,848 – 19,231,946	-	6	108	75.91	-1.17	0.71	0.786062
6112	2R_DroMel_CAF1	19,232,462 – 19,232,563	- - - - - - - - -	9786	19,232,462 – 19,232,563	-	5	104	93.63	-1.31	0.89	0.771402
6113	2R_DroMel_CAF1	19,235,851 – 19,236,150	- - - - - - - - -	9787	19,235,851 – 19,235,971	-	4	120	70.16	-1.87	0.53	0.891549
				9788	19,235,891 – 19,236,010	-	3	120	71.83	-2.44	0.67	0.999902
				9789	19,235,931 – 19,236,046	+	3	116	74.93	-1.78	0.56	0.578833
				9790	19,236,010 – 19,236,122	+	3	112	97.02	-1.99	0.95	0.838484
				9791	19,236,046 – 19,236,150	-	3	104	96.79	-1.59	0.94	0.563832
6114	2R_DroMel_CAF1	19,236,972 – 19,237,086	- - - - - - - - -	9792	19,236,972 – 19,237,086	-	5	114	92.28	-1.54	0.87	0.905132
6115	2R_DroMel_CAF1	19,239,833 – 19,239,948	- - - - - - - - -	9793	19,239,833 – 19,239,948	-	3	115	91.55	-2.94	0.72	0.666754
6116	2R_DroMel_CAF1	19,241,631 – 19,241,730	- - - - - - - - -	9794	19,241,631 – 19,241,730	+	6	119	74.54	-2.15	0.60	0.979119
6116	2R_DroMel_CAF1	19,241,631 – 19,241,730	- - - - - - - - -	9795	19,241,631 – 19,241,730	-	6	119	74.54	-2.38	0.36	0.860838
6117	2R_DroMel_CAF1	19,243,871 – 19,243,981	- - - "knownCDS=Parent=FBtr0072093;Name=egl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4051-RA" - - - - -	9796	19,243,871 – 19,243,981	-	6	120	76.15	-1.68	0.59	0.809915
6118	2R_DroMel_CAF1	19,245,487 – 19,245,579	- - - "knownCDS=Parent=FBtr0072093;Name=egl-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4051-RA" - - - - -	9797	19,245,487 – 19,245,579	+	6	101	75.30	-1.47	0.65	0.834087
6119	2R_DroMel_CAF1	19,247,996 – 19,248,127	- - - - - - - - -	9798	19,247,996 – 19,248,101	+	5	116	81.34	-2.50	0.70	0.974680
				9799	19,247,996 – 19,248,101	-	5	116	81.34	-2.56	0.70	0.980471
				9800	19,248,029 – 19,248,127	+	5	105	82.74	-1.88	0.73	0.793097
				9801	19,248,029 – 19,248,127	-	5	105	82.74	-2.02	0.87	0.940074
6120	2R_DroMel_CAF1	19,254,001 – 19,254,107	- - - - - - - - -	9802	19,254,001 – 19,254,107	+	5	108	91.52	-1.62	0.78	0.703357
6121	2R_DroMel_CAF1	19,254,429 – 19,254,549	- - - - - - - - -	9803	19,254,429 – 19,254,549	+	4	120	87.92	-1.83	0.81	0.830460
6122	2R_DroMel_CAF1	19,254,790 – 19,254,943	- - - - - - - - -	9804	19,254,790 – 19,254,903	+	4	113	86.87	-1.80	0.70	0.692230
6122	2R_DroMel_CAF1	19,254,790 – 19,254,943	- - - - - - - - -	9805	19,254,823 – 19,254,943	+	4	120	90.83	-1.48	0.81	0.561712
6123	2R_DroMel_CAF1	19,257,005 – 19,257,104	- - - - - - - - -	9806	19,257,005 – 19,257,104	-	4	120	84.70	-1.70	0.68	0.634852
6124	2R_DroMel_CAF1	19,258,519 – 19,258,630	- - - "knownCDS=Parent=FBtr0072089;Name=CG12491-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12491-RA" - - - - -	9807	19,258,519 – 19,258,630	+	3	120	91.67	-1.64	0.96	0.775048
6125	2R_DroMel_CAF1	19,265,241 – 19,265,354	- - - - - - - - -	9808	19,265,241 – 19,265,354	+	6	120	79.30	-1.77	0.60	0.717754
6126	2R_DroMel_CAF1	19,272,219 – 19,272,310	- - - - - - - - -	9809	19,272,219 – 19,272,310	+	6	112	78.42	-2.10	0.73	0.954431
6126	2R_DroMel_CAF1	19,272,219 – 19,272,310	- - - - - - - - -	9810	19,272,219 – 19,272,310	-	6	112	78.42	-1.96	0.72	0.939941
6127	2R_DroMel_CAF1	19,272,734 – 19,272,826	- - - - - - - - -	9811	19,272,734 – 19,272,826	+	6	93	81.51	-1.18	0.85	0.523235
6128	2R_DroMel_CAF1	19,273,559 – 19,273,653	- - - - - - - - -	9812	19,273,559 – 19,273,653	+	5	94	93.01	-1.51	0.81	0.662894
6129	2R_DroMel_CAF1	19,274,489 – 19,274,579	- - - - - - - - -	9813	19,274,489 – 19,274,579	+	6	91	84.16	-2.81	0.71	0.751934
6130	2R_DroMel_CAF1	19,283,122 – 19,283,213	- - - - - - - - -	9814	19,283,122 – 19,283,213	-	5	91	97.36	-1.51	0.90	0.868336
6131	2R_DroMel_CAF1	19,285,510 – 19,285,624	- - - - - - - - -	9815	19,285,510 – 19,285,624	-	6	114	82.10	-1.66	0.81	0.751047
6132	2R_DroMel_CAF1	19,291,278 – 19,291,372	- - - - - - - - -	9816	19,291,278 – 19,291,372	+	6	107	80.95	-2.19	0.59	0.754436
6132	2R_DroMel_CAF1	19,291,278 – 19,291,372	- - - - - - - - -	9817	19,291,278 – 19,291,372	-	6	107	80.95	-1.92	0.60	0.660889
6133	2R_DroMel_CAF1	19,303,027 – 19,303,177	- - - - - - - - -	9818	19,303,027 – 19,303,118	-	5	101	81.60	-2.05	0.51	0.531902
6133	2R_DroMel_CAF1	19,303,027 – 19,303,177	- - - - - - - - -	9819	19,303,085 – 19,303,177	+	5	109	73.75	-2.06	0.52	0.947100
6134	2R_DroMel_CAF1	19,311,096 – 19,311,187	- - - - - - - - -	9820	19,311,096 – 19,311,187	+	6	103	76.39	-1.50	0.68	0.875593
6135	2R_DroMel_CAF1	19,311,573 – 19,311,669	- - - - - - - - -	9821	19,311,573 – 19,311,669	+	6	115	79.85	-2.64	0.64	0.948716
6135	2R_DroMel_CAF1	19,311,573 – 19,311,669	- - - - - - - - -	9822	19,311,573 – 19,311,669	-	6	115	79.85	-2.57	0.62	0.939075
6136	2R_DroMel_CAF1	19,321,789 – 19,321,884	- - - - - - - - -	9823	19,321,789 – 19,321,884	+	4	113	84.51	-1.60	0.83	0.689900
6137	2R_DroMel_CAF1	19,326,026 – 19,326,128	- - - - - - - - -	9824	19,326,026 – 19,326,128	-	3	102	95.42	-2.66	0.95	0.973704
6138	2R_DroMel_CAF1	19,327,784 – 19,327,903	- - - - - - - - -	9825	19,327,784 – 19,327,878	+	5	94	88.51	-2.65	0.75	0.969254
				9826	19,327,784 – 19,327,878	-	5	94	88.51	-2.11	0.78	0.919899
				9827	19,327,812 – 19,327,903	+	5	96	86.02	-2.42	0.59	0.536914
				9828	19,327,812 – 19,327,903	-	5	96	86.02	-3.40	0.72	0.991107
6139	2R_DroMel_CAF1	19,332,242 – 19,332,405	- - - "knownCDS=Parent=FBtr0072238;Name=CG4763-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4763-RA" - - - - -	9829	19,332,242 – 19,332,348	+	6	120	74.46	-1.28	0.68	0.816672
				9830	19,332,242 – 19,332,348	-	6	120	74.46	-1.42	0.63	0.790997
				9831	19,332,268 – 19,332,385	+	6	120	68.68	-1.76	0.55	0.930601
				9832	19,332,308 – 19,332,405	+	6	100	65.16	-1.58	0.47	0.762560
6140	2R_DroMel_CAF1	19,332,812 – 19,332,912	- - - - - - - - -	9833	19,332,812 – 19,332,912	+	3	100	93.33	-2.12	0.87	0.737045
6140	2R_DroMel_CAF1	19,332,812 – 19,332,912	- - - - - - - - -	9834	19,332,812 – 19,332,912	-	3	100	93.33	-2.23	0.92	0.896588
6141	2R_DroMel_CAF1	19,333,095 – 19,333,186	- - - - - - - - -	9835	19,333,095 – 19,333,186	+	3	92	75.37	-1.90	0.59	0.837772
6142	2R_DroMel_CAF1	19,333,849 – 19,334,085	- - "RNAmicro=f:19333849_t:19333968_strand:+_p:0.985202" - - - - - -	9836	19,333,849 – 19,333,957	+	6	120	79.44	-2.75	0.68	0.967275
				9837	19,333,957 – 19,334,062	+	5	118	78.85	-2.42	0.43	0.932889
				9838	19,333,985 – 19,334,085	-	4	102	85.66	-1.72	0.80	0.753873
6143	2R_DroMel_CAF1	19,334,467 – 19,334,565	- - - - - - - - -	9839	19,334,467 – 19,334,565	-	4	103	80.24	-2.14	0.73	0.950472
6144	2R_DroMel_CAF1	19,334,732 – 19,334,875	- - - - - - - - -	9840	19,334,732 – 19,334,835	+	5	103	94.27	-1.54	0.80	0.592857
				9841	19,334,732 – 19,334,835	-	5	103	94.27	-1.67	0.86	0.939769
				9842	19,334,771 – 19,334,875	+	4	104	97.41	-4.14	1.00	0.975609
				9843	19,334,771 – 19,334,875	-	4	104	97.41	-2.95	0.98	0.982471
6145	2R_DroMel_CAF1	19,337,479 – 19,337,574	- - - - - - - - -	9844	19,337,479 – 19,337,574	+	6	109	72.66	-1.75	0.54	0.867392
6145	2R_DroMel_CAF1	19,337,479 – 19,337,574	- - - - - - - - -	9845	19,337,479 – 19,337,574	-	6	109	72.66	-1.77	0.50	0.794872
6146	2R_DroMel_CAF1	19,342,206 – 19,342,297	- - - - - - - - -	9846	19,342,206 – 19,342,297	+	6	98	64.60	-1.36	0.51	0.638945
6147	2R_DroMel_CAF1	19,343,897 – 19,343,987	- - - "knownCDS=Parent=FBtr0072125;Name=CG5549-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5549-RA" - - - - -	9847	19,343,897 – 19,343,987	+	4	99	84.83	-3.05	0.78	0.992947
6147	2R_DroMel_CAF1	19,343,897 – 19,343,987		9848	19,343,897 – 19,343,987	-	4	99	84.83	-2.77	0.86	0.993709
6148	2R_DroMel_CAF1	19,344,054 – 19,344,417	- - - "knownCDS=Parent=FBtr0072125;Name=CG5549-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5549-RA" - - - - -	9849	19,344,054 – 19,344,153	+	5	99	88.28	-2.15	0.84	0.978948
				9850	19,344,113 – 19,344,224	+	5	120	78.77	-1.70	0.58	0.512322
				9851	19,344,113 – 19,344,224	-	5	120	78.77	-1.68	0.61	0.558644
				9852	19,344,153 – 19,344,258	+	5	114	79.07	-1.97	0.49	0.638878
				9853	19,344,153 – 19,344,258	-	5	114	79.07	-1.79	0.60	0.649384
				9854	19,344,193 – 19,344,292	+	5	114	75.82	-2.17	0.56	0.961957
				9855	19,344,193 – 19,344,292	-	5	114	75.82	-2.54	0.60	0.995707
				9856	19,344,258 – 19,344,363	+	5	111	73.11	-1.76	0.52	0.743192
				9857	19,344,292 – 19,344,400	+	6	120	66.49	-1.87	0.34	0.701759
				9858	19,344,326 – 19,344,417	+	5	99	72.61	-2.32	0.33	0.987243
6149	2R_DroMel_CAF1	19,344,553 – 19,344,647	- - - "knownCDS=Parent=FBtr0072125;Name=CG5549-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5549-RA" - - - - -	9859	19,344,553 – 19,344,647	+	5	115	82.05	-1.87	0.58	0.545632
6150	2R_DroMel_CAF1	19,347,582 – 19,347,696	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002474; Name=psi18s-176;Alias=snoRNA:314;Dbxref=FB:FBgn0065068, GB:AJ809560,FB:FBgn0083043,GB:NR_002554" - - - - - - - -	9860	19,347,582 – 19,347,696	+	6	118	78.05	-1.05	0.74	0.638352
6151	2R_DroMel_CAF1	19,355,995 – 19,356,108	- - - - - - - - -	9861	19,355,995 – 19,356,108	+	3	119	89.80	-2.04	0.82	0.637450
6152	2R_DroMel_CAF1	19,359,079 – 19,359,192	- - - - - - - - -	9862	19,359,079 – 19,359,192	-	6	119	81.06	-2.31	0.54	0.677486
6153	2R_DroMel_CAF1	19,360,442 – 19,360,562	- - - "knownCDS=Parent=FBtr0072127;Name=gbb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5562-RA" - - - - -	9863	19,360,442 – 19,360,562	-	6	120	82.28	-1.92	0.67	0.662599
6154	2R_DroMel_CAF1	19,367,692 – 19,367,794	- - - "knownCDS=Parent=FBtr0089627;Name=TBPH-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10327-RD" - - - - -	9864	19,367,692 – 19,367,794	-	6	111	74.36	-1.44	0.63	0.809044
6155	2R_DroMel_CAF1	19,370,385 – 19,370,479	- - - - - - - - -	9865	19,370,385 – 19,370,479	-	4	107	73.91	-1.46	0.68	0.642220
6156	2R_DroMel_CAF1	19,372,702 – 19,372,793	- - - - - - - - -	9866	19,372,702 – 19,372,793	-	5	93	96.10	-1.99	0.77	0.541144
6157	2R_DroMel_CAF1	19,373,268 – 19,373,385	- - - "knownCDS=Parent=FBtr0072128;Name=CG5569-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5569-RA" - - - - -	9867	19,373,268 – 19,373,385	+	6	120	76.69	-1.56	0.57	0.609558
6158	2R_DroMel_CAF1	19,375,611 – 19,375,706	- - - - - - - - -	9868	19,375,611 – 19,375,706	+	6	100	82.62	-2.21	0.75	0.819668
6158	2R_DroMel_CAF1	19,375,611 – 19,375,706	- - - - - - - - -	9869	19,375,611 – 19,375,706	-	6	100	82.62	-1.48	0.74	0.568879
6159	2R_DroMel_CAF1	19,375,903 – 19,376,027	- - - - - - - - -	9870	19,375,903 – 19,376,007	-	6	105	90.99	-2.17	0.88	0.973601
				9871	19,375,928 – 19,376,027	+	6	103	84.72	-1.98	0.78	0.656948
				9872	19,375,928 – 19,376,027	-	6	103	84.72	-2.93	0.82	0.936461
6160	2R_DroMel_CAF1	19,376,221 – 19,376,317	- - - - - - - - -	9873	19,376,221 – 19,376,317	-	4	102	85.86	-1.47	0.81	0.585489
6161	2R_DroMel_CAF1	19,382,828 – 19,382,948	- - - "knownCDS=Parent=FBtr0072129;Name=ken-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5575-RA" - - - - -	9874	19,382,828 – 19,382,948	+	6	120	81.61	-1.50	0.67	0.568427
6162	2R_DroMel_CAF1	19,386,806 – 19,386,914	- - - - - - - - -	9875	19,386,806 – 19,386,914	-	3	119	92.13	-1.77	0.87	0.551483
6163	2R_DroMel_CAF1	19,387,034 – 19,387,151	- - - - - - - - -	9876	19,387,034 – 19,387,151	-	5	120	83.69	-2.13	0.77	0.920829
6164	2R_DroMel_CAF1	19,389,206 – 19,389,309	- - - - - - - - -	9877	19,389,206 – 19,389,309	-	5	108	76.44	-2.02	0.53	0.874133
6165	2R_DroMel_CAF1	19,390,493 – 19,390,610	- - - - - - - - -	9878	19,390,493 – 19,390,610	-	5	117	91.02	-2.16	0.70	0.520335
6166	2R_DroMel_CAF1	19,392,101 – 19,392,211	- - - - - - - - -	9879	19,392,101 – 19,392,211	+	6	113	82.12	-2.10	0.66	0.728551
6167	2R_DroMel_CAF1	19,396,712 – 19,396,826	- - - "knownCDS=Parent=FBtr0072223;Name=CG11183-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11183-RA" - - - - -	9880	19,396,712 – 19,396,826	-	6	120	73.39	-1.84	0.51	0.850360
6168	2R_DroMel_CAF1	19,398,774 – 19,398,894	- - - "knownCDS=Parent=FBtr0072132;Name=CG5602-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5602-RA" - - - - -	9881	19,398,774 – 19,398,894	+	6	120	76.89	-2.12	0.43	0.622957
6169	2R_DroMel_CAF1	19,402,969 – 19,403,089	- - - "knownCDS=Parent=FBtr0072133;Name=CG17658-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17658-RA" - - - - -	9882	19,402,969 – 19,403,089	+	4	120	87.36	-1.79	0.72	0.704048
6169	2R_DroMel_CAF1	19,402,969 – 19,403,089		9883	19,402,969 – 19,403,089	-	4	120	87.36	-1.62	0.68	0.559214
6170	2R_DroMel_CAF1	19,403,935 – 19,404,034	- - - "knownCDS=Parent=FBtr0072133;Name=CG17658-cds, ;Dbxref=FlyBase+Annotation+IDs:CG17658-RA" - - - - -	9884	19,403,935 – 19,404,034	-	6	114	66.11	-2.27	0.22	0.680219
6171	2R_DroMel_CAF1	19,404,384 – 19,404,500	- - - - - - - - -	9885	19,404,384 – 19,404,500	+	4	117	85.41	-1.79	0.78	0.783707
6171	2R_DroMel_CAF1	19,404,384 – 19,404,500	- - - - - - - - -	9886	19,404,384 – 19,404,500	-	4	117	85.41	-1.41	0.96	0.769633
6172	2R_DroMel_CAF1	19,416,546 – 19,416,643	- - - - - - - - -	9887	19,416,546 – 19,416,643	+	5	120	76.57	-1.38	0.68	0.532165
6173	2R_DroMel_CAF1	19,420,179 – 19,420,269	- - - - - - - - -	9888	19,420,179 – 19,420,269	+	6	107	76.27	-1.22	0.66	0.655448
6174	2R_DroMel_CAF1	19,421,332 – 19,421,435	- - - "knownCDS=Parent=FBtr0072136, FBtr0072137, FBtr0072138, FBtr0072139;Name=CG5594-cds, ;Dbxref=FlyBase+Annotation+IDs:CG5594-RA, FlyBase+Annotation+IDs:CG5594-RD, FlyBase+Annotation+IDs:CG5594-RB, FlyBase+Annotation+IDs:CG5594-RC" - - - - -	9889	19,421,332 – 19,421,435	+	6	110	80.39	-2.14	0.85	0.937885
6175	2R_DroMel_CAF1	19,431,562 – 19,431,652	- - - - - - - - -	9890	19,431,562 – 19,431,652	+	6	94	77.08	-1.65	0.81	0.945121
6176	2R_DroMel_CAF1	19,440,588 – 19,440,680	- - - - - - - - -	9891	19,440,588 – 19,440,680	-	5	97	85.64	-1.78	0.74	0.702740
6177	2R_DroMel_CAF1	19,442,500 – 19,442,619	- - - - - - - - -	9892	19,442,500 – 19,442,619	-	5	120	78.24	-1.33	0.77	0.647553
6178	2R_DroMel_CAF1	19,443,288 – 19,443,408	- - - - - - - - -	9893	19,443,288 – 19,443,408	+	6	120	96.00	-1.42	0.95	0.980078
6178	2R_DroMel_CAF1	19,443,288 – 19,443,408	- - - - - - - - -	9894	19,443,288 – 19,443,408	-	6	120	96.00	-1.82	0.90	0.975319
6179	2R_DroMel_CAF1	19,454,147 – 19,454,245	- - - - - - - - -	9895	19,454,147 – 19,454,245	+	6	99	75.84	-1.73	0.54	0.686283
6180	2R_DroMel_CAF1	19,461,199 – 19,461,301	- - - - - - - - -	9896	19,461,199 – 19,461,301	-	6	103	79.78	-1.16	0.71	0.563163
6181	2R_DroMel_CAF1	19,462,295 – 19,462,415	- - - "knownCDS=Parent=FBtr0072147;Name=thoc5-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2980-RA" - - - - -	9897	19,462,295 – 19,462,415	-	6	120	82.50	-1.81	0.77	0.744745
6182	2R_DroMel_CAF1	19,465,429 – 19,465,534	- - - - - - - - -	9898	19,465,429 – 19,465,534	+	6	120	81.45	-2.23	0.59	0.725631
6183	2R_DroMel_CAF1	19,467,412 – 19,467,567	- - - "knownCDS=Parent=FBtr0072148;Name=alpha-catenin-related-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2987-RA" - - - - -	9899	19,467,412 – 19,467,532	+	6	120	82.78	-2.03	0.68	0.659548
				9900	19,467,412 – 19,467,532	-	6	120	82.78	-1.85	0.73	0.691114
				9901	19,467,452 – 19,467,567	+	6	115	90.43	-2.29	0.79	0.574485
6184	2R_DroMel_CAF1	19,468,694 – 19,468,832	- - - - - - - - -	9902	19,468,694 – 19,468,792	+	3	98	89.80	-2.37	0.83	0.813086
6184	2R_DroMel_CAF1	19,468,694 – 19,468,832	- - - - - - - - -	9903	19,468,719 – 19,468,832	+	4	120	84.27	-1.75	0.75	0.742157
6185	2R_DroMel_CAF1	19,470,086 – 19,470,218	- - - - - - - - -	9904	19,470,086 – 19,470,199	-	6	120	75.17	-1.77	0.47	0.525731
6185	2R_DroMel_CAF1	19,470,086 – 19,470,218	- - - - - - - - -	9905	19,470,126 – 19,470,218	-	5	92	88.16	-1.84	0.74	0.725905
6186	2R_DroMel_CAF1	19,472,493 – 19,472,653	- - - "knownCDS=Parent=FBtr0072151;Name=Alas-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3017-RA" - - - - -	9906	19,472,493 – 19,472,613	+	3	120	93.89	-2.03	0.84	0.580928
6186	2R_DroMel_CAF1	19,472,493 – 19,472,653		9907	19,472,533 – 19,472,653	+	3	120	96.11	-2.28	0.89	0.813584
6187	2R_DroMel_CAF1	19,472,804 – 19,472,924	- - - "knownCDS=Parent=FBtr0072151;Name=Alas-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3017-RA" - - - - -	9908	19,472,804 – 19,472,924	-	3	120	96.11	-1.77	0.92	0.616839
6188	2R_DroMel_CAF1	19,476,843 – 19,476,935	- - - "knownCDS=Parent=FBtr0072205;Name=CG10904-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10904-RA" - - - - -	9909	19,476,843 – 19,476,935	-	6	101	79.44	-2.09	0.59	0.845189
6189	2R_DroMel_CAF1	19,485,446 – 19,485,548	- - - - - - - - -	9910	19,485,446 – 19,485,548	-	6	118	82.86	-1.75	0.68	0.561488
6190	2R_DroMel_CAF1	19,485,752 – 19,485,856	- - - - - - - - -	9911	19,485,752 – 19,485,856	+	4	104	86.86	-1.89	0.70	0.729648
6191	2R_DroMel_CAF1	19,486,166 – 19,486,298	- - - - - - - - -	9912	19,486,166 – 19,486,270	+	4	120	79.91	-1.24	0.88	0.576213
				9913	19,486,198 – 19,486,298	+	3	101	95.71	-3.37	0.95	0.989235
				9914	19,486,198 – 19,486,298	-	3	101	95.71	-3.45	0.95	0.988122
6192	2R_DroMel_CAF1	19,489,236 – 19,489,341	- - - - - - - - -	9915	19,489,236 – 19,489,341	+	5	120	74.09	-1.88	0.23	0.870334
6193	2R_DroMel_CAF1	19,490,801 – 19,490,946	- - - - - - - - -	9916	19,490,801 – 19,490,909	+	4	120	88.56	-1.77	0.86	0.847720
6193	2R_DroMel_CAF1	19,490,801 – 19,490,946	- - - - - - - - -	9917	19,490,841 – 19,490,946	+	4	117	85.36	-2.50	0.81	0.976805
6194	2R_DroMel_CAF1	19,498,940 – 19,499,060	- - - "knownCDS=Parent=FBtr0072160;Name=CG3105-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3105-RA" - - - - -	9918	19,498,940 – 19,499,060	-	6	120	78.89	-1.86	0.54	0.597497
6195	2R_DroMel_CAF1	19,506,224 – 19,506,328	- - - - - - - - -	9919	19,506,224 – 19,506,328	-	6	109	72.66	-1.37	0.64	0.824897
6196	2R_DroMel_CAF1	19,514,586 – 19,514,694	- - - "knownCDS=Parent=FBtr0091464;Name=CG33519-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33519-RB" - - - - -	9920	19,514,586 – 19,514,694	-	6	108	85.06	-1.78	0.79	0.571759
6197	2R_DroMel_CAF1	19,516,540 – 19,516,660	- - - "knownCDS=Parent=FBtr0091464;Name=CG33519-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33519-RB" - - - - -	9921	19,516,540 – 19,516,660	+	6	120	78.33	-2.07	0.66	0.938273
6197	2R_DroMel_CAF1	19,516,540 – 19,516,660		9922	19,516,540 – 19,516,660	-	6	120	78.33	-1.90	0.58	0.807792
6198	2R_DroMel_CAF1	19,516,965 – 19,517,067	- - - "knownCDS=Parent=FBtr0091464;Name=CG33519-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33519-RB" - - - - -	9923	19,516,965 – 19,517,067	-	6	102	81.69	-2.13	0.62	0.721109
6199	2R_DroMel_CAF1	19,517,433 – 19,517,579	- - - "knownCDS=Parent=FBtr0091464;Name=CG33519-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33519-RB" - - - - -	9924	19,517,433 – 19,517,541	+	4	108	92.75	-3.75	0.87	0.984503
				9925	19,517,469 – 19,517,579	+	4	110	92.73	-3.93	0.91	0.993516
				9926	19,517,469 – 19,517,579	-	4	110	92.73	-2.52	0.91	0.988010
6200	2R_DroMel_CAF1	19,517,653 – 19,517,749	- - - "knownCDS=Parent=FBtr0091464;Name=CG33519-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33519-RB" - - - - -	9927	19,517,653 – 19,517,749	+	6	117	75.81	-2.20	0.50	0.924837
6200	2R_DroMel_CAF1	19,517,653 – 19,517,749		9928	19,517,653 – 19,517,749	-	6	117	75.81	-2.85	0.54	0.993921
6201	2R_DroMel_CAF1	19,523,471 – 19,523,679	- - - "knownCDS=Parent=FBtr0072197;Name=CG4324-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4324-RA" - - - - -	9929	19,523,471 – 19,523,578	-	6	118	74.07	-1.64	0.53	0.658407
6201	2R_DroMel_CAF1	19,523,471 – 19,523,679		9930	19,523,578 – 19,523,679	-	6	110	71.27	-0.78	0.72	0.633479
6202	2R_DroMel_CAF1	19,525,331 – 19,525,440	- - - "knownCDS=Parent=FBtr0072161;Name=CG3121-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3121-RA" - - - - -	9931	19,525,331 – 19,525,440	+	6	115	78.20	-0.82	0.78	0.500000
6203	2R_DroMel_CAF1	19,529,161 – 19,529,274	- - - - - - - - -	9932	19,529,161 – 19,529,274	-	3	113	87.54	-2.12	0.70	0.527335
6204	2R_DroMel_CAF1	19,530,178 – 19,530,378	- - - "knownCDS=Parent=FBtr0072162;Name=CG11388-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11388-RA" - - - - -	9933	19,530,178 – 19,530,298	-	4	120	92.64	-1.80	0.89	0.866857
6204	2R_DroMel_CAF1	19,530,178 – 19,530,378		9934	19,530,258 – 19,530,378	-	5	120	86.08	-2.22	0.76	0.926450
6205	2R_DroMel_CAF1	19,535,186 – 19,535,293	- - - - - - - - -	9935	19,535,186 – 19,535,293	-	5	108	84.52	-1.96	0.71	0.768117
6206	2R_DroMel_CAF1	19,537,295 – 19,537,433	- - - "knownCDS=Parent=FBtr0072165;Name=CG3163-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3163-RA" - - - - -	9936	19,537,295 – 19,537,397	-	6	120	67.68	-1.98	0.48	0.956789
6206	2R_DroMel_CAF1	19,537,295 – 19,537,433		9937	19,537,317 – 19,537,433	-	6	120	69.34	-2.00	0.37	0.836385
6207	2R_DroMel_CAF1	19,539,349 – 19,539,538	- - - "knownCDS=Parent=FBtr0072191;Name=Chi-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3924-RA" - - - - -	9938	19,539,349 – 19,539,458	+	6	109	97.43	-1.59	0.86	0.685652
				9939	19,539,378 – 19,539,498	+	6	120	94.17	-1.45	0.88	0.770069
				9940	19,539,418 – 19,539,538	-	6	120	93.50	-1.64	0.92	0.972918
6208	2R_DroMel_CAF1	19,541,246 – 19,541,396	- - - "knownCDS=Parent=FBtr0072192;Name=Chi-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3924-RB" - - - - -	9941	19,541,246 – 19,541,361	-	5	120	75.11	-2.09	0.42	0.913676
6208	2R_DroMel_CAF1	19,541,246 – 19,541,396		9942	19,541,286 – 19,541,396	-	4	116	82.15	-2.61	0.70	0.982236
6209	2R_DroMel_CAF1	19,541,408 – 19,541,533	- - - - - - - - -	9943	19,541,408 – 19,541,508	-	5	120	85.87	-1.47	0.85	0.564417
				9944	19,541,428 – 19,541,533	+	5	120	87.93	-2.26	0.79	0.962041
				9945	19,541,428 – 19,541,533	-	5	120	87.93	-1.79	0.85	0.909451
6210	2R_DroMel_CAF1	19,542,293 – 19,542,385	- - - "knownCDS=Parent=FBtr0072166, FBtr0072167;Name=CG3167-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3167-RA, FlyBase+Annotation+IDs:CG3167-RB" - - - - -	9946	19,542,293 – 19,542,385	-	6	93	92.85	-1.20	0.93	0.811761
6211	2R_DroMel_CAF1	19,544,723 – 19,544,823	- - - - - - - - -	9947	19,544,723 – 19,544,823	+	6	115	77.43	-2.46	0.54	0.961665
6211	2R_DroMel_CAF1	19,544,723 – 19,544,823	- - - - - - - - -	9948	19,544,723 – 19,544,823	-	6	115	77.43	-2.10	0.46	0.644691
6212	2R_DroMel_CAF1	19,544,863 – 19,544,968	- - - "knownCDS=Parent=FBtr0072189, FBtr0072190;Name=CG13567-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13567-RB, FlyBase+Annotation+IDs:CG13567-RA" - - - - -	9949	19,544,863 – 19,544,968	-	6	118	76.61	-1.82	0.60	0.875268
6213	2R_DroMel_CAF1	19,545,662 – 19,545,791	- - - "knownCDS=Parent=FBtr0072168;Name=CG3173-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3173-RA" - - - - -	9950	19,545,662 – 19,545,770	+	6	113	83.52	-1.76	0.73	0.577940
6213	2R_DroMel_CAF1	19,545,662 – 19,545,791		9951	19,545,693 – 19,545,791	+	6	107	82.12	-1.91	0.72	0.747744
6214	2R_DroMel_CAF1	19,553,003 – 19,553,097	- - - - - - - - -	9952	19,553,003 – 19,553,097	-	5	102	89.26	-2.01	0.83	0.963919
6215	2R_DroMel_CAF1	19,553,143 – 19,553,236	- - - - - - - - -	9953	19,553,143 – 19,553,236	+	5	93	92.57	-1.26	0.93	0.807567
6215	2R_DroMel_CAF1	19,553,143 – 19,553,236	- - - - - - - - -	9954	19,553,143 – 19,553,236	-	5	93	92.57	-1.45	0.89	0.891040
6216	2R_DroMel_CAF1	19,553,267 – 19,553,381	- - - - - - - - -	9955	19,553,267 – 19,553,381	+	5	114	94.80	-1.57	0.92	0.971078
6216	2R_DroMel_CAF1	19,553,267 – 19,553,381	- - - - - - - - -	9956	19,553,267 – 19,553,381	-	5	114	94.80	-2.28	0.93	0.999656
6217	2R_DroMel_CAF1	19,553,469 – 19,553,599	- - - - - - - - -	9957	19,553,469 – 19,553,566	+	5	105	90.19	-2.58	0.77	0.968506
				9958	19,553,469 – 19,553,566	-	5	105	90.19	-1.60	0.73	0.500000
				9959	19,553,504 – 19,553,599	-	5	103	86.88	-2.30	0.73	0.900071
6218	2R_DroMel_CAF1	19,553,638 – 19,554,050	- - - - - - - - -	9960	19,553,638 – 19,553,751	-	5	120	86.40	-3.73	0.57	0.879446
				9961	19,553,712 – 19,553,826	+	6	120	92.47	-3.05	0.77	0.660596
				9962	19,553,751 – 19,553,857	+	6	118	91.82	-2.57	0.82	0.897169
				9963	19,553,857 – 19,553,950	+	6	101	84.25	-3.37	0.58	0.663014
				9964	19,553,910 – 19,554,029	+	6	120	91.40	-3.01	0.84	0.976677
				9965	19,553,950 – 19,554,050	-	6	105	94.82	-0.70	0.98	0.555043
6219	2R_DroMel_CAF1	19,555,311 – 19,555,431	- - - "knownCDS=Parent=FBtr0072187;Name=gammaSnap-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3988-RA" - - - - -	9966	19,555,311 – 19,555,431	+	6	120	83.61	-1.76	0.72	0.556087
6220	2R_DroMel_CAF1	19,555,670 – 19,555,790	- - - "knownCDS=Parent=FBtr0072187;Name=gammaSnap-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3988-RA" - - - - -	9967	19,555,670 – 19,555,790	+	6	120	84.89	-2.09	0.76	0.630199
6221	2R_DroMel_CAF1	19,556,332 – 19,556,442	- - - "knownCDS=Parent=FBtr0072187;Name=gammaSnap-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3988-RA" - - - - -	9968	19,556,332 – 19,556,442	+	5	110	89.45	-2.31	0.72	0.819254
6222	2R_DroMel_CAF1	19,562,754 – 19,562,849	- - - - - - - - -	9969	19,562,754 – 19,562,849	+	6	120	78.32	-1.82	0.52	0.551641
6222	2R_DroMel_CAF1	19,562,754 – 19,562,849	- - - - - - - - -	9970	19,562,754 – 19,562,849	-	6	120	78.32	-2.49	0.53	0.939534
6223	2R_DroMel_CAF1	19,563,325 – 19,563,427	- - - "knownCDS=Parent=FBtr0072171;Name=CG13563-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13563-RA" - - - - -	9971	19,563,325 – 19,563,427	+	6	120	78.27	-1.76	0.67	0.887925
6224	2R_DroMel_CAF1	19,563,687 – 19,563,807	- - - "knownCDS=Parent=FBtr0072171;Name=CG13563-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13563-RA" - - - - -	9972	19,563,687 – 19,563,807	-	5	120	89.17	-1.65	0.84	0.849765
6225	2R_DroMel_CAF1	19,565,800 – 19,565,953	- - - - - - - - -	9973	19,565,800 – 19,565,914	+	5	120	89.86	-1.76	0.73	0.601859
				9974	19,565,800 – 19,565,914	-	5	120	89.86	-3.95	0.84	0.999789
				9975	19,565,840 – 19,565,953	-	5	120	88.72	-2.95	0.78	0.993558
6226	2R_DroMel_CAF1	19,569,112 – 19,569,223	- - - - - - - - -	9976	19,569,112 – 19,569,223	-	4	114	65.79	-1.67	0.55	0.940116
6227	2R_DroMel_CAF1	19,569,959 – 19,570,069	- - - "knownCDS=Parent=FBtr0072185;Name=RpL39-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3997-RA" - - - - -	9977	19,569,959 – 19,570,069	+	6	111	79.70	-1.87	0.56	0.629055
6228	2R_DroMel_CAF1	19,574,268 – 19,574,361	- - - - - - - - -	9978	19,574,268 – 19,574,361	+	6	94	96.01	-1.17	0.89	0.569533
6229	2R_DroMel_CAF1	19,576,104 – 19,576,211	- - - - - - - - -	9979	19,576,104 – 19,576,211	+	5	111	84.07	-3.00	0.61	0.945829
6229	2R_DroMel_CAF1	19,576,104 – 19,576,211	- - - - - - - - -	9980	19,576,104 – 19,576,211	-	5	111	84.07	-3.67	0.66	0.993018
6230	2R_DroMel_CAF1	19,577,873 – 19,577,988	- - - - - - - - -	9981	19,577,873 – 19,577,988	+	5	116	89.43	-2.37	0.70	0.743420
6231	2R_DroMel_CAF1	19,581,638 – 19,581,734	- - - - - - - - -	9982	19,581,638 – 19,581,734	+	6	120	78.42	-3.25	0.55	0.989370
6231	2R_DroMel_CAF1	19,581,638 – 19,581,734	- - - - - - - - -	9983	19,581,638 – 19,581,734	-	6	120	78.42	-3.72	0.57	0.993477
6232	2R_DroMel_CAF1	19,582,515 – 19,582,635	- - - - - - - - -	9984	19,582,515 – 19,582,635	+	6	120	100.00	-1.28	1.00	0.984611
6232	2R_DroMel_CAF1	19,582,515 – 19,582,635	- - - - - - - - -	9985	19,582,515 – 19,582,635	-	6	120	100.00	-1.22	1.00	0.977974
6233	2R_DroMel_CAF1	19,584,748 – 19,584,868	- - - "knownCDS=Parent=FBtr0072182;Name=CG30179-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30179-RA" - - - - -	9986	19,584,748 – 19,584,868	+	6	120	82.11	-1.92	0.60	0.527176
6233	2R_DroMel_CAF1	19,584,748 – 19,584,868		9987	19,584,748 – 19,584,868	-	6	120	82.11	-1.93	0.59	0.500000
6234	2R_DroMel_CAF1	19,585,303 – 19,585,404	- - - - - - - - -	9988	19,585,303 – 19,585,404	+	6	115	69.79	-2.73	0.43	0.996867
6235	2R_DroMel_CAF1	19,585,982 – 19,586,099	- - - "knownCDS=Parent=FBtr0072288;Name=CG10339-cds, ;Dbxref=FlyBase+Annotation+IDs:CG10339-RA" - - - - -	9989	19,585,982 – 19,586,099	-	6	120	81.13	-2.01	0.57	0.598051
6236	2R_DroMel_CAF1	19,588,625 – 19,588,745	- - - "knownCDS=Parent=FBtr0072246;Name=CG13564-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13564-RA" - - - - -	9990	19,588,625 – 19,588,745	-	5	120	91.67	-1.58	0.81	0.789931
6237	2R_DroMel_CAF1	19,591,089 – 19,591,197	- - - "knownCDS=Parent=FBtr0072247, FBtr0072248;Name=CG16786-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16786-RA, FlyBase+Annotation+IDs:CG16786-RB" - - - - -	9991	19,591,089 – 19,591,197	+	6	120	78.38	-1.50	0.65	0.732979
6238	2R_DroMel_CAF1	19,594,120 – 19,594,216	- - - - - - - - -	9992	19,594,120 – 19,594,216	-	4	96	90.45	-1.60	0.85	0.724152
6239	2R_DroMel_CAF1	19,600,340 – 19,600,443	- - - "knownCDS=Parent=FBtr0072287;Name=gek-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4012-RA" - - - - -	9993	19,600,340 – 19,600,443	-	6	108	78.84	-1.72	0.62	0.775079
6240	2R_DroMel_CAF1	19,603,266 – 19,603,374	- - - "knownCDS=Parent=FBtr0072287;Name=gek-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4012-RA" - - - - -	9994	19,603,266 – 19,603,374	+	6	120	78.10	-2.72	0.52	0.968652
6241	2R_DroMel_CAF1	19,605,173 – 19,605,286	- - - - - - - - -	9995	19,605,173 – 19,605,286	+	5	114	90.96	-1.98	0.85	0.979490
6242	2R_DroMel_CAF1	19,605,438 – 19,605,529	- - - - - - - - -	9996	19,605,438 – 19,605,529	-	5	91	85.81	-1.81	0.72	0.680667
6243	2R_DroMel_CAF1	19,606,958 – 19,607,067	- - - - - - - - -	9997	19,606,958 – 19,607,067	-	6	115	87.69	-1.85	0.83	0.648502
6244	2R_DroMel_CAF1	19,611,150 – 19,611,242	- - - "knownCDS=Parent=FBtr0072250;Name=enok-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11290-RA" - - - - -	9998	19,611,150 – 19,611,242	-	6	92	85.94	-2.04	0.79	0.620542
6245	2R_DroMel_CAF1	19,614,240 – 19,614,351	- - - "knownCDS=Parent=FBtr0072250;Name=enok-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11290-RA" - - - - -	9999	19,614,240 – 19,614,351	+	6	120	76.66	-2.10	0.41	0.536859
6246	2R_DroMel_CAF1	19,615,880 – 19,615,988	- - - "knownCDS=Parent=FBtr0072285;Name=CG4049-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4049-RA" - - - - -	10000	19,615,880 – 19,615,988	+	6	111	81.53	-1.85	0.65	0.689493
6247	2R_DroMel_CAF1	19,618,782 – 19,618,902	- - - "knownCDS=Parent=FBtr0072285;Name=CG4049-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4049-RA" - - - - -	10001	19,618,782 – 19,618,902	+	6	120	90.94	-1.71	0.86	0.709502
6248	2R_DroMel_CAF1	19,618,942 – 19,619,062	- - - "knownCDS=Parent=FBtr0072285;Name=CG4049-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4049-RA" - - - - -	10002	19,618,942 – 19,619,062	-	6	120	94.33	-1.72	0.92	0.982857
6249	2R_DroMel_CAF1	19,620,080 – 19,620,192	- - - "knownCDS=Parent=FBtr0072285;Name=CG4049-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4049-RA" - - - - -	10003	19,620,080 – 19,620,192	+	5	112	93.04	-1.39	0.91	0.902377
6250	2R_DroMel_CAF1	19,620,341 – 19,620,435	- - - "knownCDS=Parent=FBtr0072285;Name=CG4049-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4049-RA" - - - - -	10004	19,620,341 – 19,620,435	-	4	94	92.02	-1.61	0.81	0.616870
6251	2R_DroMel_CAF1	19,621,370 – 19,621,485	- - - - - - - - -	10005	19,621,370 – 19,621,485	+	5	120	83.61	-1.99	0.71	0.802301
6252	2R_DroMel_CAF1	19,627,744 – 19,627,839	- - - "knownCDS=Parent=FBtr0100568;Name=CG3257-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3257-RB" - - - - -	10006	19,627,744 – 19,627,839	-	6	95	92.04	-0.96	0.97	0.730498
6253	2R_DroMel_CAF1	19,633,017 – 19,633,116	- - - - - - - - -	10007	19,633,017 – 19,633,116	+	4	120	74.70	-1.66	0.77	0.931290
6254	2R_DroMel_CAF1	19,638,201 – 19,638,294	- - - - - - - - -	10008	19,638,201 – 19,638,294	+	6	102	75.67	-2.58	0.37	0.925110
6255	2R_DroMel_CAF1	19,639,638 – 19,639,742	- - - - - - - - -	10009	19,639,638 – 19,639,742	-	5	118	90.05	-1.52	0.78	0.620067
6256	2R_DroMel_CAF1	19,641,101 – 19,641,203	- - - - - - - - -	10010	19,641,101 – 19,641,203	+	5	102	92.25	-1.24	0.98	0.878100
6257	2R_DroMel_CAF1	19,647,003 – 19,647,119	- - - - - - - - -	10011	19,647,003 – 19,647,119	-	5	120	93.98	-2.07	0.90	0.997840
6258	2R_DroMel_CAF1	19,648,886 – 19,648,996	- - - - - - - - -	10012	19,648,886 – 19,648,996	-	5	110	76.36	-1.83	0.45	0.588535
6259	2R_DroMel_CAF1	19,649,291 – 19,649,429	- - - - - - - - -	10013	19,649,291 – 19,649,395	+	3	117	87.28	-2.72	0.69	0.766763
				10014	19,649,291 – 19,649,395	-	3	117	87.28	-1.86	0.81	0.594445
				10015	19,649,327 – 19,649,429	+	3	112	78.27	-1.99	0.69	0.937573
6260	2R_DroMel_CAF1	19,649,691 – 19,649,787	- - - - - - - - -	10016	19,649,691 – 19,649,787	+	5	102	72.36	-1.27	0.66	0.590045
6261	2R_DroMel_CAF1	19,650,120 – 19,650,308	- - - - - - - - -	10017	19,650,120 – 19,650,237	-	4	119	86.88	-2.11	0.79	0.904300
6261	2R_DroMel_CAF1	19,650,120 – 19,650,308	- - - - - - - - -	10018	19,650,197 – 19,650,308	-	4	120	86.89	-1.66	0.75	0.684154
6262	2R_DroMel_CAF1	19,650,493 – 19,650,592	- - - - - - - - -	10019	19,650,493 – 19,650,592	-	4	120	78.09	-2.57	0.57	0.971054
6263	2R_DroMel_CAF1	19,662,387 – 19,662,507	- - - - - - - - -	10020	19,662,387 – 19,662,507	+	3	120	83.06	-1.49	0.82	0.587743
6264	2R_DroMel_CAF1	19,662,529 – 19,662,661	- - - "knownCDS=Parent=FBtr0072255;Name=Dat-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3318-RB" - - - - -	10021	19,662,529 – 19,662,634	-	3	114	88.59	-2.40	0.77	0.742466
				10022	19,662,569 – 19,662,661	+	6	120	73.03	-1.25	0.62	0.639399
				10023	19,662,569 – 19,662,661	-	6	120	73.03	-1.75	0.54	0.849981
6265	2R_DroMel_CAF1	19,666,146 – 19,666,244	- - - - - - - - -	10024	19,666,146 – 19,666,244	-	6	101	78.99	-1.19	0.68	0.562701
6266	2R_DroMel_CAF1	19,667,742 – 19,667,836	- - - "knownCDS=Parent=FBtr0072256;Name=spag-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13570-RA" - - - - -	10025	19,667,742 – 19,667,836	-	6	104	78.60	-0.98	0.72	0.517142
6267	2R_DroMel_CAF1	19,670,464 – 19,670,556	- - - - - - - - -	10026	19,670,464 – 19,670,556	-	3	93	69.78	-1.52	0.62	0.920443
6268	2R_DroMel_CAF1	19,677,169 – 19,677,289	- - - "knownCDS=Parent=FBtr0072257;Name=CG3328-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3328-RA" - - - - -	10027	19,677,169 – 19,677,289	+	6	120	86.06	-2.03	0.82	0.731492
6269	2R_DroMel_CAF1	19,680,479 – 19,680,612	- - - - - - - - -	10028	19,680,479 – 19,680,574	+	3	102	77.74	-3.80	0.62	0.999580
				10029	19,680,479 – 19,680,574	-	3	102	77.74	-2.79	0.60	0.991583
				10030	19,680,519 – 19,680,612	-	3	101	83.11	-1.78	0.71	0.605788
6270	2R_DroMel_CAF1	19,681,977 – 19,682,079	- - - - - - - - -	10031	19,681,977 – 19,682,079	+	5	116	80.97	-1.85	0.75	0.839316
6271	2R_DroMel_CAF1	19,683,802 – 19,683,909	"known=snoRNA_ID=Dmel\CG_RFAM_MAN_48002475; Name=snoRNA" - - - "Rfam=AF089836.1/1-140_RF00291;snoR639;\|8e-41" "Noncode=n798,u330,AF097634,H1,Drosophila_melanogaster_(fruit_fly)\|1e-41" - - "Flybase=FBgn0026169:snoRNA:H1:nuclear_small_nucleolar_RNA_gene\|1e-42"	10032	19,683,802 – 19,683,909	+	6	112	76.20	-0.83	0.78	0.660660
6272	2R_DroMel_CAF1	19,684,090 – 19,684,210	- - - "knownCDS=Parent=FBtr0072258;Name=Nop60B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3333-RA" - - - - -	10033	19,684,090 – 19,684,210	+	6	120	83.33	-2.22	0.63	0.538124
6273	2R_DroMel_CAF1	19,684,290 – 19,684,397	- - - "knownCDS=Parent=FBtr0072258;Name=Nop60B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3333-RA" - - - - -	10034	19,684,290 – 19,684,397	-	6	120	76.16	-1.05	0.67	0.508448
6274	2R_DroMel_CAF1	19,697,223 – 19,697,338	- - - "knownCDS=Parent=FBtr0072260;Name=CG3363-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3363-RA" - - - - -	10035	19,697,223 – 19,697,338	-	6	118	78.70	-1.25	0.65	0.545219
6275	2R_DroMel_CAF1	19,706,054 – 19,706,150	- - - - - - - - -	10036	19,706,054 – 19,706,150	+	6	101	77.24	-2.06	0.49	0.753487
6276	2R_DroMel_CAF1	19,709,170 – 19,709,263	- - - "knownCDS=Parent=FBtr0072262;Name=CG3356-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3356-RA" - - - - -	10037	19,709,170 – 19,709,263	-	6	93	79.77	-1.12	0.71	0.539960
6277	2R_DroMel_CAF1	19,710,533 – 19,710,659	- - - - - - - - -	10038	19,710,533 – 19,710,625	+	5	118	66.00	-1.89	0.39	0.750570
6277	2R_DroMel_CAF1	19,710,533 – 19,710,659	- - - - - - - - -	10039	19,710,552 – 19,710,659	+	4	115	63.75	-2.22	0.53	0.995903
6278	2R_DroMel_CAF1	19,713,273 – 19,713,365	- - - - - - - - -	10040	19,713,273 – 19,713,365	-	6	100	77.32	-1.60	0.71	0.905831
6279	2R_DroMel_CAF1	19,713,720 – 19,713,822	- - - - - - - - -	10041	19,713,720 – 19,713,822	-	4	118	69.02	-2.36	0.37	0.537331
6280	2R_DroMel_CAF1	19,721,212 – 19,721,313	- - - - - - - - -	10042	19,721,212 – 19,721,313	-	6	106	82.05	-2.63	0.65	0.845940
6281	2R_DroMel_CAF1	19,721,726 – 19,721,830	- - - - - - - - -	10043	19,721,726 – 19,721,830	-	6	120	80.79	-1.52	0.67	0.634938
6282	2R_DroMel_CAF1	19,722,659 – 19,722,753	- - - "knownCDS=Parent=FBtr0072275;Name=CG30419-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30419-RA" - - - - -	10044	19,722,659 – 19,722,753	-	6	110	77.09	-1.51	0.64	0.777225
6283	2R_DroMel_CAF1	19,726,207 – 19,726,303	- - - - - - - - -	10045	19,726,207 – 19,726,303	+	6	96	77.72	-1.39	0.60	0.500000
6283	2R_DroMel_CAF1	19,726,207 – 19,726,303	- - - - - - - - -	10046	19,726,207 – 19,726,303	-	6	96	77.72	-1.84	0.60	0.845754
6284	2R_DroMel_CAF1	19,729,794 – 19,729,908	- - - - - - - - -	10047	19,729,794 – 19,729,908	+	6	120	84.67	-1.83	0.81	0.669345
6285	2R_DroMel_CAF1	19,735,765 – 19,735,856	- - - - - - - - -	10048	19,735,765 – 19,735,856	-	6	116	77.09	-1.47	0.70	0.870057
6286	2R_DroMel_CAF1	19,736,210 – 19,736,302	- - - - - - - - -	10049	19,736,210 – 19,736,302	+	4	92	89.86	-1.37	0.85	0.531674
6287	2R_DroMel_CAF1	19,739,256 – 19,739,373	- - - - - - - - -	10050	19,739,256 – 19,739,373	-	4	120	74.53	-1.49	0.68	0.631052
6288	2R_DroMel_CAF1	19,739,720 – 19,739,850	- - - - - - - - -	10051	19,739,720 – 19,739,822	+	4	109	88.31	-3.07	0.76	0.969814
				10052	19,739,720 – 19,739,822	-	4	109	88.31	-2.80	0.77	0.964082
				10053	19,739,749 – 19,739,850	+	4	107	88.62	-2.79	0.88	0.993480
				10054	19,739,749 – 19,739,850	-	4	107	88.62	-1.87	0.84	0.870851
6289	2R_DroMel_CAF1	19,741,413 – 19,741,511	- - - - - - - - -	10055	19,741,413 – 19,741,511	+	5	104	90.04	-1.91	0.71	0.554026
6290	2R_DroMel_CAF1	19,742,540 – 19,742,633	- - - - - - - - -	10056	19,742,540 – 19,742,633	+	3	93	72.97	-1.82	0.79	0.997743
6291	2R_DroMel_CAF1	19,744,066 – 19,744,158	- - - - - - - - -	10057	19,744,066 – 19,744,158	+	5	93	92.85	-1.62	0.79	0.685455
6292	2R_DroMel_CAF1	19,745,296 – 19,745,457	- - - - - - - - -	10058	19,745,296 – 19,745,387	+	5	120	74.36	-2.20	0.53	0.974373
6292	2R_DroMel_CAF1	19,745,296 – 19,745,457	- - - - - - - - -	10059	19,745,352 – 19,745,457	+	3	114	87.69	-2.80	0.66	0.677940
6293	2R_DroMel_CAF1	19,745,799 – 19,745,893	- - - - - - - - -	10060	19,745,799 – 19,745,893	+	3	95	96.48	-2.02	0.90	0.704604
6294	2R_DroMel_CAF1	19,746,097 – 19,746,196	- - - - - - - - -	10061	19,746,097 – 19,746,196	+	3	120	85.25	-2.20	0.88	0.934851
6295	2R_DroMel_CAF1	19,746,723 – 19,746,843	- - - - - - - - -	10062	19,746,723 – 19,746,843	+	5	120	95.67	-1.57	1.00	0.992115
6295	2R_DroMel_CAF1	19,746,723 – 19,746,843	- - - - - - - - -	10063	19,746,723 – 19,746,843	-	5	120	95.67	-2.05	0.97	0.999460
6296	2R_DroMel_CAF1	19,747,159 – 19,747,291	- - - - - - - - -	10064	19,747,159 – 19,747,259	+	4	110	83.66	-1.96	0.77	0.869989
				10065	19,747,159 – 19,747,259	-	4	110	83.66	-2.33	0.71	0.938524
				10066	19,747,190 – 19,747,291	-	6	120	73.51	-2.24	0.44	0.939055
6297	2R_DroMel_CAF1	19,747,549 – 19,747,665	- - - - - - - - -	10067	19,747,549 – 19,747,665	-	5	120	86.63	-1.83	0.69	0.580611
6298	2R_DroMel_CAF1	19,747,954 – 19,748,055	- - - - - - - - -	10068	19,747,954 – 19,748,055	+	4	101	92.74	-1.94	0.81	0.761263
6299	2R_DroMel_CAF1	19,748,062 – 19,748,199	- - - - - - - - -	10069	19,748,062 – 19,748,169	-	4	120	82.56	-2.31	0.69	0.938840
6299	2R_DroMel_CAF1	19,748,062 – 19,748,199	- - - - - - - - -	10070	19,748,101 – 19,748,199	-	4	110	79.75	-1.59	0.76	0.672295
6300	2R_DroMel_CAF1	19,748,371 – 19,748,478	- - - - - - - - -	10071	19,748,371 – 19,748,478	+	5	107	97.29	-1.26	0.90	0.570910
6301	2R_DroMel_CAF1	19,749,451 – 19,749,547	- - - - - - - - -	10072	19,749,451 – 19,749,547	-	5	96	96.56	-1.58	0.95	0.977053
6302	2R_DroMel_CAF1	19,749,560 – 19,749,655	- - - - - - - - -	10073	19,749,560 – 19,749,655	+	5	105	79.98	-2.54	0.57	0.966673
6303	2R_DroMel_CAF1	19,751,685 – 19,751,796	- - - - - - - - -	10074	19,751,685 – 19,751,796	-	5	111	87.03	-1.89	0.71	0.679427
6304	2R_DroMel_CAF1	19,752,773 – 19,752,882	- - - - - - - - -	10075	19,752,773 – 19,752,882	+	6	116	81.69	-2.41	0.63	0.805409
6304	2R_DroMel_CAF1	19,752,773 – 19,752,882	- - - - - - - - -	10076	19,752,773 – 19,752,882	-	6	116	81.69	-2.17	0.63	0.745101
6305	2R_DroMel_CAF1	19,753,943 – 19,754,082	- - - - - - - - -	10077	19,753,943 – 19,754,042	+	4	120	81.02	-1.65	0.84	0.779710
6305	2R_DroMel_CAF1	19,753,943 – 19,754,082	- - - - - - - - -	10078	19,753,976 – 19,754,082	+	4	120	90.00	-1.58	0.87	0.748835
6306	2R_DroMel_CAF1	19,754,196 – 19,754,296	- - - - - - - - -	10079	19,754,196 – 19,754,296	+	4	100	99.00	-2.00	0.97	0.753692
6306	2R_DroMel_CAF1	19,754,196 – 19,754,296	- - - - - - - - -	10080	19,754,196 – 19,754,296	-	4	100	99.00	-1.69	0.96	0.511674
6307	2R_DroMel_CAF1	19,754,610 – 19,754,729	- - - - - - - - -	10081	19,754,610 – 19,754,729	+	4	119	97.05	-2.35	0.91	0.915940
6307	2R_DroMel_CAF1	19,754,610 – 19,754,729	- - - - - - - - -	10082	19,754,610 – 19,754,729	-	4	119	97.05	-1.69	0.92	0.633920
6308	2R_DroMel_CAF1	19,759,501 – 19,759,597	- - - - - - - - -	10083	19,759,501 – 19,759,597	+	6	104	82.64	-2.83	0.53	0.639679
6309	2R_DroMel_CAF1	19,761,958 – 19,762,056	- - - "knownCDS=Parent=FBtr0072263;Name=nord-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30418-RA" - - - - -	10084	19,761,958 – 19,762,056	+	6	98	77.55	-1.20	0.66	0.574306
6310	2R_DroMel_CAF1	19,777,076 – 19,777,168	- - - - - - - - -	10085	19,777,076 – 19,777,168	+	3	120	68.38	-1.69	0.72	0.998663
6311	2R_DroMel_CAF1	19,781,796 – 19,781,888	- - - - - - - - -	10086	19,781,796 – 19,781,888	-	6	114	76.73	-1.54	0.62	0.766130
6312	2R_DroMel_CAF1	19,782,825 – 19,782,928	- - - - - - - - -	10087	19,782,825 – 19,782,928	-	6	106	79.42	-1.85	0.56	0.636682
6313	2R_DroMel_CAF1	19,790,266 – 19,790,367	- - - - - - - - -	10088	19,790,266 – 19,790,367	+	3	101	82.78	-1.57	0.73	0.500000
6314	2R_DroMel_CAF1	19,793,231 – 19,793,323	- - - - - - - - -	10089	19,793,231 – 19,793,323	+	6	111	71.97	-1.61	0.65	0.948724
6314	2R_DroMel_CAF1	19,793,231 – 19,793,323	- - - - - - - - -	10090	19,793,231 – 19,793,323	-	6	111	71.97	-1.85	0.53	0.910623
6315	2R_DroMel_CAF1	19,794,305 – 19,794,419	- - - - - - - - -	10091	19,794,305 – 19,794,419	-	6	116	79.08	-1.31	0.65	0.571569
6316	2R_DroMel_CAF1	19,797,255 – 19,797,363	- - - "knownCDS=Parent=FBtr0072267;Name=nvy-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3385-RA" - - - - -	10092	19,797,255 – 19,797,363	+	6	115	76.01	-1.32	0.64	0.658040
6317	2R_DroMel_CAF1	19,797,859 – 19,797,952	- - - - - - - - -	10093	19,797,859 – 19,797,952	-	6	114	76.87	-1.31	0.71	0.813630
6318	2R_DroMel_CAF1	19,802,635 – 19,802,787	- - - - - - - - -	10094	19,802,635 – 19,802,752	-	5	117	71.76	-1.94	0.16	0.893150
6318	2R_DroMel_CAF1	19,802,635 – 19,802,787	- - - - - - - - -	10095	19,802,673 – 19,802,787	+	5	114	75.49	-1.95	0.40	0.797610
6319	2R_DroMel_CAF1	19,808,955 – 19,809,092	- - - - - - - - -	10096	19,808,955 – 19,809,052	+	6	120	81.03	-1.71	0.89	0.865137
				10097	19,808,972 – 19,809,092	+	6	120	97.56	-2.74	0.96	0.999944
				10098	19,808,972 – 19,809,092	-	6	120	97.56	-2.06	0.92	0.996730
6320	2R_DroMel_CAF1	19,813,362 – 19,813,456	- - - - - - - - -	10099	19,813,362 – 19,813,456	-	6	94	74.86	-1.55	0.59	0.761804
6321	2R_DroMel_CAF1	19,814,035 – 19,814,131	- - - - - - - - -	10100	19,814,035 – 19,814,131	+	6	118	75.57	-1.32	0.78	0.924754
6321	2R_DroMel_CAF1	19,814,035 – 19,814,131	- - - - - - - - -	10101	19,814,035 – 19,814,131	-	6	118	75.57	-0.94	0.69	0.533353
6322	2R_DroMel_CAF1	19,824,446 – 19,824,560	- - - - - - - - -	10102	19,824,446 – 19,824,560	+	5	120	94.50	-1.18	0.90	0.634657
6322	2R_DroMel_CAF1	19,824,446 – 19,824,560	- - - - - - - - -	10103	19,824,446 – 19,824,560	-	5	120	94.50	-1.11	0.93	0.610612
6323	2R_DroMel_CAF1	19,824,642 – 19,824,753	- - - - - - - - -	10104	19,824,642 – 19,824,753	+	5	120	82.15	-1.95	0.64	0.728005
6324	2R_DroMel_CAF1	19,825,223 – 19,825,333	- - - - - - - - -	10105	19,825,223 – 19,825,333	-	5	120	84.41	-2.54	0.63	0.872716
6325	2R_DroMel_CAF1	19,827,211 – 19,827,370	- - - - - - - - -	10106	19,827,211 – 19,827,302	+	4	99	88.07	-1.84	0.80	0.814647
6325	2R_DroMel_CAF1	19,827,211 – 19,827,370	- - - - - - - - -	10107	19,827,276 – 19,827,370	-	5	94	92.98	-1.57	0.79	0.625588
6326	2R_DroMel_CAF1	19,831,053 – 19,831,146	- - - - - - - - -	10108	19,831,053 – 19,831,146	-	5	93	78.61	-1.72	0.70	0.810590
6327	2R_DroMel_CAF1	19,837,677 – 19,837,772	- - - - - - - - -	10109	19,837,677 – 19,837,772	-	5	101	72.41	-1.42	0.10	0.500000
6328	2R_DroMel_CAF1	19,841,870 – 19,841,968	- - - - - - - - -	10110	19,841,870 – 19,841,968	+	6	120	78.10	-1.42	0.67	0.761764
6329	2R_DroMel_CAF1	19,844,597 – 19,844,716	- - - - - - - - -	10111	19,844,597 – 19,844,716	+	4	120	87.20	-1.74	0.71	0.677702
6330	2R_DroMel_CAF1	19,845,273 – 19,845,375	- - - - - - - - -	10112	19,845,273 – 19,845,375	+	4	102	83.50	-2.41	0.73	0.961554
6330	2R_DroMel_CAF1	19,845,273 – 19,845,375	- - - - - - - - -	10113	19,845,273 – 19,845,375	-	4	102	83.50	-2.57	0.84	0.988948
6331	2R_DroMel_CAF1	19,845,909 – 19,846,001	- - - - - - - - -	10114	19,845,909 – 19,846,001	+	6	108	83.11	-1.76	0.69	0.567321
6332	2R_DroMel_CAF1	19,846,045 – 19,846,280	- - - - - - - - -	10115	19,846,045 – 19,846,158	+	5	113	85.62	-1.89	0.70	0.667429
				10116	19,846,045 – 19,846,158	-	5	113	85.62	-2.30	0.70	0.859673
				10117	19,846,084 – 19,846,190	-	4	113	87.98	-1.93	0.72	0.754803
				10118	19,846,123 – 19,846,229	+	6	113	81.07	-2.40	0.52	0.668290
				10119	19,846,190 – 19,846,280	+	6	98	85.21	-2.36	0.82	0.853794
6333	2R_DroMel_CAF1	19,848,765 – 19,848,855	- - - - - - - - -	10120	19,848,765 – 19,848,855	+	6	94	81.38	-1.75	0.59	0.500000
6333	2R_DroMel_CAF1	19,848,765 – 19,848,855	- - - - - - - - -	10121	19,848,765 – 19,848,855	-	6	94	81.38	-1.78	0.64	0.650435
6334	2R_DroMel_CAF1	19,852,629 – 19,852,720	- - - - - - - - -	10122	19,852,629 – 19,852,720	+	3	91	75.88	-1.27	0.81	0.855714
6335	2R_DroMel_CAF1	19,854,702 – 19,854,827	- - - - - - - - -	10123	19,854,702 – 19,854,799	+	5	109	87.86	-1.58	0.87	0.815464
				10124	19,854,702 – 19,854,799	-	5	109	87.86	-2.36	0.72	0.869232
				10125	19,854,725 – 19,854,827	+	5	103	95.13	-1.98	0.81	0.908185
				10126	19,854,725 – 19,854,827	-	5	103	95.13	-2.55	0.82	0.990222
6336	2R_DroMel_CAF1	19,856,198 – 19,856,299	- - - - - - - - -	10127	19,856,198 – 19,856,299	+	6	120	79.73	-2.13	0.65	0.900455
6336	2R_DroMel_CAF1	19,856,198 – 19,856,299	- - - - - - - - -	10128	19,856,198 – 19,856,299	-	6	120	79.73	-2.42	0.72	0.948024
6337	2R_DroMel_CAF1	19,856,418 – 19,856,522	- - "RNAmicro=f:19856418_t:19856537_strand:+_p:0.982551" - - - - - -	10129	19,856,418 – 19,856,522	+	5	120	73.72	-3.55	0.74	0.999738
6337	2R_DroMel_CAF1	19,856,418 – 19,856,522		10130	19,856,418 – 19,856,522	-	5	120	73.72	-2.75	0.38	0.998715
6338	2R_DroMel_CAF1	19,870,637 – 19,870,739	- - - - - - - - -	10131	19,870,637 – 19,870,739	+	6	110	76.88	-1.77	0.68	0.933885
6338	2R_DroMel_CAF1	19,870,637 – 19,870,739	- - - - - - - - -	10132	19,870,637 – 19,870,739	-	6	110	76.88	-1.60	0.65	0.862012
6339	2R_DroMel_CAF1	19,881,645 – 19,881,753	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000134; Name=Dmel_Asn_GTT_14000134;TFAMID=DmelNGTT-19881663" "tRNAscan=type:Asn:anticodon:GTT f:19881662_t:19881752_strand=+_cove=86.74" - - "Rfam=AC008257.6/22178-22105_RF00005;tRNA;\|5e-36" - - - "Flybase=FBgn0011931:transfer_RNA:asn5:42Aa:cytosolic_tRNA_gene\|7e-38"	10133	19,881,645 – 19,881,753	-	6	120	84.90	-1.36	0.88	0.520024
6340	2R_DroMel_CAF1	19,882,741 – 19,882,835	- - - - - - - - -	10134	19,882,741 – 19,882,835	+	6	120	75.22	-1.50	0.56	0.575337
6340	2R_DroMel_CAF1	19,882,741 – 19,882,835	- - - - - - - - -	10135	19,882,741 – 19,882,835	-	6	120	75.22	-1.82	0.70	0.968373
6341	2R_DroMel_CAF1	19,884,975 – 19,885,065	- - - - - - - - -	10136	19,884,975 – 19,885,065	-	6	98	82.09	-1.83	0.70	0.713912
6342	2R_DroMel_CAF1	19,889,724 – 19,889,818	- - - - - - - - -	10137	19,889,724 – 19,889,818	+	5	108	88.72	-2.17	0.68	0.631212
6343	2R_DroMel_CAF1	19,899,106 – 19,899,204	- - - - - - - - -	10138	19,899,106 – 19,899,204	-	4	117	84.23	-1.79	0.70	0.724646
6344	2R_DroMel_CAF1	19,900,969 – 19,901,073	- - "RNAmicro=f:19900969_t:19901077_strand:+_p:0.938641" - - - - - -	10139	19,900,969 – 19,901,073	-	6	109	79.31	-2.53	0.80	0.964269
6345	2R_DroMel_CAF1	19,906,698 – 19,906,820	- - - "knownCDS=Parent=FBtr0072364;Name=slik-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4527-RB" - - - - -	10140	19,906,698 – 19,906,797	+	6	120	80.60	-1.13	0.89	0.549951
6345	2R_DroMel_CAF1	19,906,698 – 19,906,820		10141	19,906,719 – 19,906,820	+	6	120	76.11	-1.25	0.81	0.904994
6346	2R_DroMel_CAF1	19,907,017 – 19,907,137	- - - - - - - - -	10142	19,907,017 – 19,907,137	+	5	120	91.33	-1.88	0.85	0.969587
6346	2R_DroMel_CAF1	19,907,017 – 19,907,137	- - - - - - - - -	10143	19,907,017 – 19,907,137	-	5	120	91.33	-1.33	0.85	0.646354
6347	2R_DroMel_CAF1	19,909,933 – 19,910,031	- - - - - - - - -	10144	19,909,933 – 19,910,031	-	6	116	81.35	-2.51	0.54	0.730993
6348	2R_DroMel_CAF1	19,911,847 – 19,911,950	- - - - - - - - -	10145	19,911,847 – 19,911,950	+	6	103	91.26	-2.56	0.81	0.798145
6349	2R_DroMel_CAF1	19,913,334 – 19,913,436	- - - "knownCDS=Parent=FBtr0072362;Name=SerT-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4545-RA" - - - - -	10146	19,913,334 – 19,913,436	+	6	109	73.62	-1.19	0.62	0.546973
6350	2R_DroMel_CAF1	19,914,492 – 19,914,608	- - - - - - - - -	10147	19,914,492 – 19,914,608	+	6	116	73.34	-1.49	0.65	0.902910
6351	2R_DroMel_CAF1	19,916,549 – 19,916,708	- - - "knownCDS=Parent=FBtr0072362;Name=SerT-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4545-RA" - - - - -	10148	19,916,549 – 19,916,668	-	6	120	81.11	-1.93	0.77	0.860506
6351	2R_DroMel_CAF1	19,916,549 – 19,916,708		10149	19,916,588 – 19,916,708	-	6	120	82.22	-2.61	0.76	0.903618
6352	2R_DroMel_CAF1	19,918,346 – 19,918,436	- - - - - - - - -	10150	19,918,346 – 19,918,436	+	4	90	96.11	-1.81	0.94	0.831487
6353	2R_DroMel_CAF1	19,919,430 – 19,919,528	- - - - - - - - -	10151	19,919,430 – 19,919,528	-	4	100	85.37	-1.49	0.72	0.561168
6354	2R_DroMel_CAF1	19,921,027 – 19,921,147	- - - "knownCDS=Parent=FBtr0072292;Name=CG3419-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3419-RB" - - - - -	10152	19,921,027 – 19,921,147	-	6	120	79.61	-1.97	0.55	0.653931
6355	2R_DroMel_CAF1	19,923,518 – 19,923,613	- - - - - - - - -	10153	19,923,518 – 19,923,613	-	6	106	68.25	-1.92	0.48	0.939172
6356	2R_DroMel_CAF1	19,930,897 – 19,930,992	- - - "knownCDS=Parent=FBtr0072360;Name=CG30164-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30164-RA" - - - - -	10154	19,930,897 – 19,930,992	+	6	114	77.30	-1.20	0.74	0.790228
6357	2R_DroMel_CAF1	19,936,129 – 19,936,221	- - - - - - - - -	10155	19,936,129 – 19,936,221	+	3	92	80.15	-1.40	0.81	0.693831
6357	2R_DroMel_CAF1	19,936,129 – 19,936,221	- - - - - - - - -	10156	19,936,129 – 19,936,221	-	3	92	80.15	-1.84	0.70	0.797121
6358	2R_DroMel_CAF1	19,939,133 – 19,939,241	- - "RNAmicro=f:19939133_t:19939247_strand:+_p:0.889609" - - - - - -	10157	19,939,133 – 19,939,241	+	6	115	76.79	-1.70	0.69	0.927189
6358	2R_DroMel_CAF1	19,939,133 – 19,939,241		10158	19,939,133 – 19,939,241	-	6	115	76.79	-1.89	0.58	0.866008
6359	2R_DroMel_CAF1	19,939,434 – 19,939,527	- - - "knownCDS=Parent=FBtr0072356;Name=CG15874-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15874-RA" - - - - -	10159	19,939,434 – 19,939,527	+	6	118	72.57	-1.41	0.56	0.576849
6360	2R_DroMel_CAF1	19,942,177 – 19,942,267	- - - - - - - - -	10160	19,942,177 – 19,942,267	+	6	90	92.56	-2.09	0.85	0.895446
6361	2R_DroMel_CAF1	19,942,537 – 19,942,640	- - - - - - - - -	10161	19,942,537 – 19,942,640	-	6	120	75.91	-1.48	0.61	0.713837
6362	2R_DroMel_CAF1	19,944,653 – 19,944,759	- - - - - - - - -	10162	19,944,653 – 19,944,759	-	5	106	72.22	-1.58	0.17	0.585481
6363	2R_DroMel_CAF1	19,945,798 – 19,945,892	- - - - - - - - -	10163	19,945,798 – 19,945,892	+	5	100	87.24	-1.68	0.77	0.688420
6363	2R_DroMel_CAF1	19,945,798 – 19,945,892	- - - - - - - - -	10164	19,945,798 – 19,945,892	-	5	100	87.24	-1.97	0.68	0.585975
6364	2R_DroMel_CAF1	19,946,700 – 19,946,802	- - - - - - - - -	10165	19,946,700 – 19,946,802	-	6	111	81.15	-1.81	0.62	0.631514
6365	2R_DroMel_CAF1	19,946,950 – 19,947,081	- - - - - - - - -	10166	19,946,950 – 19,947,042	+	6	120	80.03	-1.43	0.71	0.716274
6365	2R_DroMel_CAF1	19,946,950 – 19,947,081	- - - - - - - - -	10167	19,946,985 – 19,947,081	+	5	96	73.89	-2.09	0.77	0.995172
6366	2R_DroMel_CAF1	19,948,588 – 19,948,689	- - - - - - - - -	10168	19,948,588 – 19,948,689	+	6	120	90.06	-1.18	0.91	0.538861
6367	2R_DroMel_CAF1	19,949,089 – 19,949,204	- - - - - - - - -	10169	19,949,089 – 19,949,204	+	6	120	73.57	-2.07	0.35	0.617151
6367	2R_DroMel_CAF1	19,949,089 – 19,949,204	- - - - - - - - -	10170	19,949,089 – 19,949,204	-	6	120	73.57	-2.29	0.34	0.821799
6368	2R_DroMel_CAF1	19,949,968 – 19,950,138	- - - - - - - - -	10171	19,949,968 – 19,950,080	-	5	116	72.81	-1.88	0.28	0.843506
6368	2R_DroMel_CAF1	19,949,968 – 19,950,138	- - - - - - - - -	10172	19,950,040 – 19,950,138	+	5	98	93.67	-1.63	0.86	0.921940
6369	2R_DroMel_CAF1	19,951,915 – 19,952,031	- - - - - - - - -	10173	19,951,915 – 19,952,031	+	4	117	85.61	-2.05	0.64	0.712105
6370	2R_DroMel_CAF1	19,952,339 – 19,952,430	- - - - - - - - -	10174	19,952,339 – 19,952,430	-	6	95	94.87	-1.68	0.88	0.895305
6371	2R_DroMel_CAF1	19,952,915 – 19,953,021	- - - - - - - - -	10175	19,952,915 – 19,953,021	-	5	120	86.92	-2.13	0.76	0.899415
6372	2R_DroMel_CAF1	19,953,676 – 19,953,796	- - - "knownCDS=Parent=FBtr0072293;Name=CG3483-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3483-RA" - - - - -	10176	19,953,676 – 19,953,796	+	6	120	81.50	-1.60	0.65	0.593331
6373	2R_DroMel_CAF1	19,954,719 – 19,954,822	- - - - - - - - -	10177	19,954,719 – 19,954,822	+	4	119	89.64	-1.45	0.85	0.618424
6374	2R_DroMel_CAF1	19,955,351 – 19,955,462	- - - - - - - - -	10178	19,955,351 – 19,955,462	+	3	115	85.92	-2.54	0.72	0.827840
6375	2R_DroMel_CAF1	19,958,202 – 19,958,309	- - - - - - - - -	10179	19,958,202 – 19,958,309	+	5	107	95.42	-1.46	0.81	0.500000
6376	2R_DroMel_CAF1	19,961,672 – 19,961,773	- - - - - - - - -	10180	19,961,672 – 19,961,773	+	6	102	77.33	-1.18	0.67	0.601588
6377	2R_DroMel_CAF1	19,962,058 – 19,962,148	- - - - - - - - -	10181	19,962,058 – 19,962,148	-	3	90	93.33	-1.40	0.99	0.665040
6378	2R_DroMel_CAF1	19,962,465 – 19,962,603	- - - - - - - - -	10182	19,962,465 – 19,962,583	-	3	118	87.13	-1.82	0.85	0.688572
6378	2R_DroMel_CAF1	19,962,465 – 19,962,603	- - - - - - - - -	10183	19,962,505 – 19,962,603	-	4	104	82.08	-1.77	0.74	0.766895
6379	2R_DroMel_CAF1	19,962,703 – 19,962,795	- - - - - - - - -	10184	19,962,703 – 19,962,795	+	6	107	80.46	-2.21	0.49	0.527660
6379	2R_DroMel_CAF1	19,962,703 – 19,962,795	- - - - - - - - -	10185	19,962,703 – 19,962,795	-	6	107	80.46	-2.51	0.60	0.898935
6380	2R_DroMel_CAF1	19,966,132 – 19,966,229	- - - - - - - - -	10186	19,966,132 – 19,966,229	-	3	101	92.74	-1.95	0.85	0.582626
6381	2R_DroMel_CAF1	19,967,945 – 19,968,055	- - - - - - - - -	10187	19,967,945 – 19,968,055	+	6	119	77.04	-1.48	0.75	0.908836
6381	2R_DroMel_CAF1	19,967,945 – 19,968,055	- - - - - - - - -	10188	19,967,945 – 19,968,055	-	6	119	77.04	-1.38	0.67	0.767509
6382	2R_DroMel_CAF1	19,971,908 – 19,972,015	- - - - - - - - -	10189	19,971,908 – 19,972,015	+	5	118	81.65	-2.07	0.54	0.621150
6383	2R_DroMel_CAF1	19,974,333 – 19,974,424	- - - - - - - - -	10190	19,974,333 – 19,974,424	+	5	102	90.07	-1.33	0.84	0.589099
6384	2R_DroMel_CAF1	19,975,035 – 19,975,143	- - - - - - - - -	10191	19,975,035 – 19,975,143	-	6	120	78.99	-2.07	0.49	0.594197
6385	2R_DroMel_CAF1	19,975,258 – 19,975,377	- - - - - - - - -	10192	19,975,258 – 19,975,377	+	5	120	96.83	-3.33	0.91	0.999856
6385	2R_DroMel_CAF1	19,975,258 – 19,975,377	- - - - - - - - -	10193	19,975,258 – 19,975,377	-	5	120	96.83	-3.07	0.99	0.999981
6386	2R_DroMel_CAF1	19,975,744 – 19,975,856	- - - - - - - - -	10194	19,975,744 – 19,975,856	+	5	112	93.66	-3.10	0.90	0.999929
6386	2R_DroMel_CAF1	19,975,744 – 19,975,856	- - - - - - - - -	10195	19,975,744 – 19,975,856	-	5	112	93.66	-3.56	0.87	0.999844
6387	2R_DroMel_CAF1	19,977,784 – 19,977,886	- - - - - - - - -	10196	19,977,784 – 19,977,886	+	6	114	74.33	-2.43	0.34	0.871286
6388	2R_DroMel_CAF1	19,979,152 – 19,979,256	- - - - - - - - -	10197	19,979,152 – 19,979,256	+	6	120	70.18	-1.98	0.30	0.572718
6389	2R_DroMel_CAF1	19,979,478 – 19,979,573	- - - - - - - - -	10198	19,979,478 – 19,979,573	+	4	96	92.70	-1.82	0.98	0.951362
6389	2R_DroMel_CAF1	19,979,478 – 19,979,573	- - - - - - - - -	10199	19,979,478 – 19,979,573	-	4	96	92.70	-1.66	0.91	0.822787
6390	2R_DroMel_CAF1	19,982,303 – 19,982,423	- - - "knownCDS=Parent=FBtr0072296;Name=CG3494-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3494-RB" - - - - -	10200	19,982,303 – 19,982,423	-	6	120	72.72	-2.01	0.34	0.590328
6391	2R_DroMel_CAF1	19,994,679 – 19,994,792	- - - - - - - - -	10201	19,994,679 – 19,994,792	+	5	115	91.83	-2.39	0.84	0.994848
6392	2R_DroMel_CAF1	19,999,684 – 19,999,788	- - - - - - - - -	10202	19,999,684 – 19,999,788	+	3	106	78.62	-1.70	0.70	0.806958
6393	2R_DroMel_CAF1	20,002,659 – 20,002,776	- - - "knownCDS=Parent=FBtr0072299;Name=Crtp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13580-RA" - - - - -	10203	20,002,659 – 20,002,776	-	6	117	82.22	-2.37	0.71	0.835694
6394	2R_DroMel_CAF1	20,002,904 – 20,003,020	- - - "knownCDS=Parent=FBtr0072299;Name=Crtp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13580-RA" - - - - -	10204	20,002,904 – 20,003,020	-	6	116	84.71	-2.22	0.71	0.534925
6395	2R_DroMel_CAF1	20,003,026 – 20,003,117	- - - "knownCDS=Parent=FBtr0072299;Name=Crtp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13580-RA" - - - - -	10205	20,003,026 – 20,003,117	+	6	106	75.19	-1.14	0.69	0.722393
6396	2R_DroMel_CAF1	20,004,148 – 20,004,268	- - - "knownCDS=Parent=FBtr0072299;Name=Crtp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13580-RA" - - - - -	10206	20,004,148 – 20,004,268	+	5	120	78.08	-1.77	0.56	0.578638
6397	2R_DroMel_CAF1	20,009,257 – 20,009,402	- - - - - - - - -	10207	20,009,257 – 20,009,368	+	5	119	79.75	-2.88	0.71	0.996469
				10208	20,009,257 – 20,009,368	-	5	119	79.75	-2.73	0.62	0.990356
				10209	20,009,297 – 20,009,402	+	5	113	81.33	-2.22	0.56	0.797454
				10210	20,009,297 – 20,009,402	-	5	113	81.33	-2.45	0.64	0.952719
6398	2R_DroMel_CAF1	20,009,522 – 20,009,633	- - - "knownCDS=Parent=FBtr0072350;Name=Pros28.1B-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4569-RA" - - - - -	10211	20,009,522 – 20,009,633	-	6	120	80.41	-1.71	0.68	0.778636
6399	2R_DroMel_CAF1	20,011,311 – 20,011,403	- - - - - - - - -	10212	20,011,311 – 20,011,403	+	6	92	92.97	-2.70	0.87	0.991443
6399	2R_DroMel_CAF1	20,011,311 – 20,011,403	- - - - - - - - -	10213	20,011,311 – 20,011,403	-	6	92	92.97	-1.41	0.88	0.705191
6400	2R_DroMel_CAF1	20,015,780 – 20,015,878	- - - - - - - - -	10214	20,015,780 – 20,015,878	-	6	108	82.58	-1.90	0.62	0.520440
6401	2R_DroMel_CAF1	20,020,410 – 20,020,505	- - - "knownCDS=Parent=FBtr0072348, FBtr0072349;Name=CG4589-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4589-RB, FlyBase+Annotation+IDs:CG4589-RC" - - - - -	10215	20,020,410 – 20,020,505	+	6	96	84.44	-3.49	0.62	0.737385
6402	2R_DroMel_CAF1	20,027,211 – 20,027,325	- - - "knownCDS=Parent=FBtr0072301;Name=CG13582-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13582-RA" - - - - -	10216	20,027,211 – 20,027,325	+	6	117	72.52	-2.04	0.36	0.700274
6403	2R_DroMel_CAF1	20,027,881 – 20,027,979	- - - "knownCDS=Parent=FBtr0072301;Name=CG13582-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13582-RA" - - - - -	10217	20,027,881 – 20,027,979	-	6	98	75.31	-2.23	0.46	0.910176
6404	2R_DroMel_CAF1	20,030,068 – 20,030,159	- - - - - - - - -	10218	20,030,068 – 20,030,159	-	5	94	89.67	-1.24	0.94	0.660778
6405	2R_DroMel_CAF1	20,031,141 – 20,031,249	- - - - - - - - -	10219	20,031,141 – 20,031,249	+	5	115	85.22	-1.62	0.71	0.529185
6406	2R_DroMel_CAF1	20,032,886 – 20,033,028	- - - "knownCDS=Parent=FBtr0072346;Name=CG4612-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4612-RA" - - - - -	10220	20,032,886 – 20,032,988	+	6	111	77.80	-1.93	0.70	0.943786
				10221	20,032,886 – 20,032,988	-	6	111	77.80	-3.03	0.61	0.989914
				10222	20,032,926 – 20,033,028	+	6	111	80.78	-2.83	0.69	0.940390
				10223	20,032,926 – 20,033,028	-	6	111	80.78	-3.10	0.57	0.938967
6407	2R_DroMel_CAF1	20,044,777 – 20,044,867	- - - - - - - - -	10224	20,044,777 – 20,044,867	+	4	105	71.11	-2.13	0.59	0.990850
6408	2R_DroMel_CAF1	20,044,941 – 20,045,040	- - - - - - - - -	10225	20,044,941 – 20,045,040	+	6	102	84.46	-1.91	0.85	0.805043
6409	2R_DroMel_CAF1	20,045,389 – 20,045,501	- - - - - - - - -	10226	20,045,389 – 20,045,501	+	5	119	89.14	-2.37	0.73	0.869828
6409	2R_DroMel_CAF1	20,045,389 – 20,045,501	- - - - - - - - -	10227	20,045,389 – 20,045,501	-	5	119	89.14	-2.34	0.75	0.929390
6410	2R_DroMel_CAF1	20,049,259 – 20,049,350	- - - - - - - - -	10228	20,049,259 – 20,049,350	-	3	91	80.75	-3.60	0.50	0.806703
6411	2R_DroMel_CAF1	20,049,856 – 20,049,968	- - - - - - - - -	10229	20,049,856 – 20,049,968	-	5	118	77.24	-2.35	0.46	0.959454
6412	2R_DroMel_CAF1	20,051,690 – 20,051,788	- - - - - - - - -	10230	20,051,690 – 20,051,788	+	6	98	94.35	-1.21	0.91	0.759667
6413	2R_DroMel_CAF1	20,052,260 – 20,052,351	- - - - - - - - -	10231	20,052,260 – 20,052,351	-	3	92	92.75	-2.59	0.81	0.768071
6414	2R_DroMel_CAF1	20,053,601 – 20,053,754	- - - - - - - - -	10232	20,053,601 – 20,053,719	+	6	120	73.30	-1.39	0.57	0.544080
				10233	20,053,639 – 20,053,754	+	6	120	69.48	-1.40	0.61	0.827584
				10234	20,053,639 – 20,053,754	-	6	120	69.48	-1.70	0.62	0.956438
6415	2R_DroMel_CAF1	20,054,075 – 20,054,215	- - - - - - - - -	10235	20,054,075 – 20,054,177	+	4	116	85.61	-1.66	0.68	0.605596
				10236	20,054,075 – 20,054,177	-	4	116	85.61	-2.72	0.74	0.973558
				10237	20,054,104 – 20,054,215	+	4	118	90.38	-1.82	0.83	0.829427
				10238	20,054,104 – 20,054,215	-	4	118	90.38	-1.91	0.81	0.830053
6416	2R_DroMel_CAF1	20,055,646 – 20,055,760	- - - - - - - - -	10239	20,055,646 – 20,055,760	+	4	114	93.21	-1.90	0.86	0.845771
6417	2R_DroMel_CAF1	20,057,225 – 20,057,393	- - - - - - - - -	10240	20,057,225 – 20,057,327	+	3	107	74.43	-1.77	0.56	0.568152
				10241	20,057,225 – 20,057,327	-	3	107	74.43	-1.47	0.71	0.877002
				10242	20,057,295 – 20,057,393	+	6	111	80.56	-3.03	0.77	0.959224
6418	2R_DroMel_CAF1	20,057,694 – 20,057,865	- - - - - - - - -	10243	20,057,694 – 20,057,801	+	5	110	79.82	-2.04	0.39	0.528355
6418	2R_DroMel_CAF1	20,057,694 – 20,057,865	- - - - - - - - -	10244	20,057,761 – 20,057,865	+	5	113	77.03	-1.83	0.39	0.528535
6419	2R_DroMel_CAF1	20,058,146 – 20,058,246	- - - - - - - - -	10245	20,058,146 – 20,058,246	+	4	100	90.62	-1.51	0.84	0.644243
6420	2R_DroMel_CAF1	20,061,696 – 20,061,791	- - - - - - - - -	10246	20,061,696 – 20,061,791	-	5	95	78.89	-2.49	0.48	0.957864
6421	2R_DroMel_CAF1	20,063,676 – 20,063,776	- - - - - - - - -	10247	20,063,676 – 20,063,776	+	6	107	85.11	-1.85	0.80	0.626758
6422	2R_DroMel_CAF1	20,064,866 – 20,064,969	- - - - - - - - -	10248	20,064,866 – 20,064,969	-	5	105	89.68	-1.52	0.76	0.536334
6423	2R_DroMel_CAF1	20,065,250 – 20,065,346	- - - - - - - - -	10249	20,065,250 – 20,065,346	-	6	99	86.53	-1.65	0.89	0.786609
6424	2R_DroMel_CAF1	20,065,408 – 20,065,509	- - - - - - - - -	10250	20,065,408 – 20,065,509	+	5	115	74.43	-2.17	0.44	0.955173
6424	2R_DroMel_CAF1	20,065,408 – 20,065,509	- - - - - - - - -	10251	20,065,408 – 20,065,509	-	5	115	74.43	-2.47	0.25	0.993482
6425	2R_DroMel_CAF1	20,067,212 – 20,067,322	- - - "knownCDS=Parent=FBtr0072343;Name=Nurf-38-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4634-RA" - - - - -	10252	20,067,212 – 20,067,322	-	6	116	70.31	-1.95	0.30	0.523089
6426	2R_DroMel_CAF1	20,067,871 – 20,067,973	- - - "knownCDS=Parent=FBtr0072343;Name=Nurf-38-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4634-RA" - - - - -	10253	20,067,871 – 20,067,973	-	6	112	78.00	-1.01	0.70	0.530359
6427	2R_DroMel_CAF1	20,071,330 – 20,071,425	- - - "knownCDS=Parent=FBtr0072307;Name=CG11414-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11414-RA" - - - - -	10254	20,071,330 – 20,071,425	-	6	95	82.67	-2.15	0.69	0.725324
6428	2R_DroMel_CAF1	20,075,455 – 20,075,557	- - - "knownCDS=Parent=FBtr0072308;Name=CG11416-cds, ;Dbxref=FlyBase+Annotation+IDs:CG11416-RA" - - - - -	10255	20,075,455 – 20,075,557	+	6	105	83.50	-1.61	0.72	0.522025
6428	2R_DroMel_CAF1	20,075,455 – 20,075,557		10256	20,075,455 – 20,075,557	-	6	105	83.50	-2.00	0.68	0.582564
6429	2R_DroMel_CAF1	20,076,141 – 20,076,238	- - - - - - - - -	10257	20,076,141 – 20,076,238	-	6	106	78.05	-1.42	0.69	0.792398
6430	2R_DroMel_CAF1	20,078,388 – 20,078,497	- - - "knownCDS=Parent=FBtr0072342;Name=CG12252-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12252-RA" - - - - -	10258	20,078,388 – 20,078,497	+	6	115	76.90	-1.68	0.59	0.779015
6431	2R_DroMel_CAF1	20,080,657 – 20,080,767	- - - - - - - - -	10259	20,080,657 – 20,080,767	-	6	112	83.73	-1.57	0.86	0.686689
6432	2R_DroMel_CAF1	20,086,188 – 20,086,308	- - - "knownCDS=Parent=FBtr0072341;Name=CG4681-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4681-RA" - - - - -	10260	20,086,188 – 20,086,308	+	6	120	82.17	-1.94	0.62	0.598802
6433	2R_DroMel_CAF1	20,086,508 – 20,086,602	- - - - - - - - -	10261	20,086,508 – 20,086,602	+	4	95	64.20	-1.00	0.72	0.856746
6433	2R_DroMel_CAF1	20,086,508 – 20,086,602	- - - - - - - - -	10262	20,086,508 – 20,086,602	-	4	95	64.20	-0.71	0.74	0.682531
6434	2R_DroMel_CAF1	20,094,118 – 20,094,219	- - - - - - - - -	10263	20,094,118 – 20,094,219	+	6	116	75.13	-1.04	0.82	0.880742
6434	2R_DroMel_CAF1	20,094,118 – 20,094,219	- - - - - - - - -	10264	20,094,118 – 20,094,219	-	6	116	75.13	-1.01	0.73	0.736131
6435	2R_DroMel_CAF1	20,097,725 – 20,097,935	- - - - - - - - -	10265	20,097,725 – 20,097,826	-	6	119	74.03	-1.95	0.54	0.923269
6435	2R_DroMel_CAF1	20,097,725 – 20,097,935	- - - - - - - - -	10266	20,097,826 – 20,097,935	-	6	116	73.78	-2.50	0.57	0.993138
6436	2R_DroMel_CAF1	20,099,538 – 20,099,635	- - - "knownCDS=Parent=FBtr0072312, FBtr0072313;Name=pio-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3541-RB, FlyBase+Annotation+IDs:CG3541-RC" - - - - -	10267	20,099,538 – 20,099,635	-	6	99	84.30	-1.64	0.77	0.528675
6437	2R_DroMel_CAF1	20,102,745 – 20,102,845	- - - - - - - - -	10268	20,102,745 – 20,102,845	+	4	111	74.76	-2.42	0.62	0.995064
6437	2R_DroMel_CAF1	20,102,745 – 20,102,845	- - - - - - - - -	10269	20,102,745 – 20,102,845	-	4	111	74.76	-2.52	0.55	0.989147
6438	2R_DroMel_CAF1	20,104,813 – 20,104,906	- - - - - - - - -	10270	20,104,813 – 20,104,906	+	6	108	78.71	-2.58	0.62	0.967005
6438	2R_DroMel_CAF1	20,104,813 – 20,104,906	- - - - - - - - -	10271	20,104,813 – 20,104,906	-	6	108	78.71	-2.40	0.54	0.916698
6439	2R_DroMel_CAF1	20,105,270 – 20,105,396	- - - - - - - - -	10272	20,105,270 – 20,105,373	+	6	111	75.46	-2.85	0.64	0.994637
				10273	20,105,270 – 20,105,373	-	6	111	75.46	-1.74	0.55	0.778629
				10274	20,105,299 – 20,105,396	+	6	104	72.91	-3.22	0.69	0.995544
				10275	20,105,299 – 20,105,396	-	6	104	72.91	-1.89	0.62	0.969125
6440	2R_DroMel_CAF1	20,107,628 – 20,107,720	- - - "knownCDS=Parent=FBtr0072315;Name=CG3548-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3548-RA" - - - - -	10276	20,107,628 – 20,107,720	-	6	105	75.99	-1.66	0.60	0.829316
6441	2R_DroMel_CAF1	20,108,290 – 20,108,407	- - - "knownCDS=Parent=FBtr0072315;Name=CG3548-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3548-RA" - - - - -	10277	20,108,290 – 20,108,407	-	6	120	82.54	-1.71	0.74	0.676620
6442	2R_DroMel_CAF1	20,113,296 – 20,113,416	- - - "knownCDS=Parent=FBtr0072338;Name=CG4707-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4707-RA" - - - - -	10278	20,113,296 – 20,113,416	+	6	120	79.22	-1.61	0.57	0.509620
6443	2R_DroMel_CAF1	20,115,286 – 20,115,406	- - - "knownCDS=Parent=FBtr0072318;Name=CG3579-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3579-RA" - - - - -	10279	20,115,286 – 20,115,406	-	4	120	87.91	-1.87	0.84	0.869552
6444	2R_DroMel_CAF1	20,116,584 – 20,116,681	- - - "knownCDS=Parent=FBtr0072319;Name=CG13588-cds, ;Dbxref=FlyBase+Annotation+IDs:CG13588-RA" - - - - -	10280	20,116,584 – 20,116,681	+	4	97	86.08	-3.17	0.69	0.969109
6444	2R_DroMel_CAF1	20,116,584 – 20,116,681		10281	20,116,584 – 20,116,681	-	4	97	86.08	-2.43	0.78	0.959408
6445	2R_DroMel_CAF1	20,117,856 – 20,117,952	- - - - - - - - -	10282	20,117,856 – 20,117,952	-	6	110	80.77	-1.77	0.60	0.603933
6446	2R_DroMel_CAF1	20,121,077 – 20,121,183	- - - "knownCDS=Parent=FBtr0072320;Name=CG3608-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3608-RA" - - - - -	10283	20,121,077 – 20,121,183	-	6	106	78.94	-1.02	0.72	0.533281
6447	2R_DroMel_CAF1	20,122,237 – 20,122,329	- - - - - - - - -	10284	20,122,237 – 20,122,329	+	6	115	81.00	-2.96	0.64	0.937371
6448	2R_DroMel_CAF1	20,124,469 – 20,124,561	- - - - - - - - -	10285	20,124,469 – 20,124,561	+	6	120	71.96	-1.97	0.37	0.663415
6448	2R_DroMel_CAF1	20,124,469 – 20,124,561	- - - - - - - - -	10286	20,124,469 – 20,124,561	-	6	120	71.96	-1.84	0.38	0.543056
6449	2R_DroMel_CAF1	20,129,642 – 20,129,744	- - - - - - - - -	10287	20,129,642 – 20,129,744	-	5	116	77.21	-2.36	0.38	0.959377
6450	2R_DroMel_CAF1	20,138,226 – 20,138,325	- - - - - - - - -	10288	20,138,226 – 20,138,325	+	5	107	87.95	-2.70	0.67	0.819843
6451	2R_DroMel_CAF1	20,141,451 – 20,141,554	- - - - - - - - -	10289	20,141,451 – 20,141,554	+	6	108	79.55	-1.47	0.66	0.665995
6452	2R_DroMel_CAF1	20,149,312 – 20,149,432	- - - "knownCDS=Parent=FBtr0072335;Name=CG4781-cds, ;Dbxref=FlyBase+Annotation+IDs:CG4781-RA" - - - - -	10290	20,149,312 – 20,149,432	-	6	120	76.33	-2.02	0.59	0.935575
6453	2R_DroMel_CAF1	20,152,638 – 20,152,729	- - - - - - - - -	10291	20,152,638 – 20,152,729	+	5	98	88.81	-2.05	0.84	0.973470
6453	2R_DroMel_CAF1	20,152,638 – 20,152,729	- - - - - - - - -	10292	20,152,638 – 20,152,729	-	5	98	88.81	-2.48	0.80	0.985272
6454	2R_DroMel_CAF1	20,162,939 – 20,163,029	- - - - - - - - -	10293	20,162,939 – 20,163,029	-	6	95	87.10	-2.21	0.77	0.527955
6455	2R_DroMel_CAF1	20,166,002 – 20,166,106	- - - - - - - - -	10294	20,166,002 – 20,166,106	+	4	117	78.73	-1.98	0.63	0.825280
6456	2R_DroMel_CAF1	20,166,857 – 20,166,954	- - - - - - - - -	10295	20,166,857 – 20,166,954	+	6	117	76.87	-1.84	0.54	0.741500
6457	2R_DroMel_CAF1	20,188,715 – 20,188,829	- - - - - - - - -	10296	20,188,715 – 20,188,808	-	4	93	83.12	-1.58	0.68	0.553617
6457	2R_DroMel_CAF1	20,188,715 – 20,188,829	- - - - - - - - -	10297	20,188,736 – 20,188,829	-	4	99	78.96	-2.16	0.77	0.974296
6458	2R_DroMel_CAF1	20,189,305 – 20,189,395	- - - - - - - - -	10298	20,189,305 – 20,189,395	+	6	108	81.67	-2.78	0.70	0.909909
6458	2R_DroMel_CAF1	20,189,305 – 20,189,395	- - - - - - - - -	10299	20,189,305 – 20,189,395	-	6	108	81.67	-1.70	0.69	0.679556
6459	2R_DroMel_CAF1	20,198,080 – 20,198,176	- - - - - - - - -	10300	20,198,080 – 20,198,176	+	6	120	66.12	-2.91	0.44	0.997323
6460	2R_DroMel_CAF1	20,207,362 – 20,207,519	- - - "knownCDS=Parent=FBtr0100033;Name=CG33988-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33988-RA" - - - - -	10301	20,207,362 – 20,207,479	+	6	120	86.33	-1.61	0.82	0.507339
				10302	20,207,362 – 20,207,479	-	6	120	86.33	-2.01	0.85	0.837014
				10303	20,207,399 – 20,207,519	-	6	120	76.83	-1.90	0.63	0.928562
6461	2R_DroMel_CAF1	20,210,029 – 20,210,120	- - - - - - - - -	10304	20,210,029 – 20,210,120	-	5	118	71.12	-1.59	0.09	0.578766
6462	2R_DroMel_CAF1	20,210,239 – 20,210,341	- - - - - - - - -	10305	20,210,239 – 20,210,341	-	6	120	80.07	-2.10	0.50	0.540686
6463	2R_DroMel_CAF1	20,210,952 – 20,211,052	- - - - - - - - -	10306	20,210,952 – 20,211,052	+	6	118	75.60	-1.87	0.59	0.913562
6463	2R_DroMel_CAF1	20,210,952 – 20,211,052	- - - - - - - - -	10307	20,210,952 – 20,211,052	-	6	118	75.60	-1.84	0.48	0.603255
6464	2R_DroMel_CAF1	20,211,867 – 20,211,962	- - - - - - - - -	10308	20,211,867 – 20,211,962	-	6	96	81.61	-1.83	0.85	0.859668
6465	2R_DroMel_CAF1	20,213,434 – 20,213,527	- - - - - - - - -	10309	20,213,434 – 20,213,527	+	6	95	80.71	-1.96	0.63	0.771127
6465	2R_DroMel_CAF1	20,213,434 – 20,213,527	- - - - - - - - -	10310	20,213,434 – 20,213,527	-	6	95	80.71	-2.65	0.67	0.930370
6466	2R_DroMel_CAF1	20,213,795 – 20,213,893	- - - - - - - - -	10311	20,213,795 – 20,213,893	+	6	107	81.32	-2.94	0.73	0.940036
6467	2R_DroMel_CAF1	20,215,013 – 20,215,163	- - - - - - - - -	10312	20,215,013 – 20,215,131	+	6	118	81.83	-1.61	0.68	0.619265
				10313	20,215,013 – 20,215,131	-	6	118	81.83	-2.15	0.80	0.882306
				10314	20,215,051 – 20,215,163	+	6	116	84.02	-3.16	0.64	0.738678
				10315	20,215,051 – 20,215,163	-	6	116	84.02	-2.78	0.68	0.710370
6468	2R_DroMel_CAF1	20,215,356 – 20,215,456	- - - - - - - - -	10316	20,215,356 – 20,215,456	+	6	120	79.25	-1.75	0.61	0.726053
6469	2R_DroMel_CAF1	20,217,609 – 20,217,723	- - - - - - - - -	10317	20,217,609 – 20,217,723	-	5	120	92.44	-1.71	0.90	0.979450
6470	2R_DroMel_CAF1	20,218,799 – 20,218,891	- - - - - - - - -	10318	20,218,799 – 20,218,891	-	6	114	81.18	-1.82	0.71	0.787102
6471	2R_DroMel_CAF1	20,219,429 – 20,219,541	- - - - - - - - -	10319	20,219,429 – 20,219,541	+	5	120	91.57	-1.72	0.77	0.699264
6472	2R_DroMel_CAF1	20,223,507 – 20,223,606	- - - - - - - - -	10320	20,223,507 – 20,223,606	+	5	106	95.65	-1.59	1.00	0.993165
6473	2R_DroMel_CAF1	20,226,499 – 20,226,633	- - - - - - - - -	10321	20,226,499 – 20,226,593	-	6	120	78.90	-1.75	0.55	0.556394
6473	2R_DroMel_CAF1	20,226,499 – 20,226,633	- - - - - - - - -	10322	20,226,517 – 20,226,633	-	5	116	94.05	-1.51	0.88	0.916817
6474	2R_DroMel_CAF1	20,227,312 – 20,227,403	- - - - - - - - -	10323	20,227,312 – 20,227,403	-	5	119	75.37	-2.04	0.63	0.962710
6475	2R_DroMel_CAF1	20,229,087 – 20,229,180	- - - - - - - - -	10324	20,229,087 – 20,229,180	+	6	110	76.59	-2.09	0.61	0.953313
6476	2R_DroMel_CAF1	20,230,041 – 20,230,134	- - - - - - - - -	10325	20,230,041 – 20,230,134	+	5	98	94.52	-1.96	0.88	0.991495
6477	2R_DroMel_CAF1	20,230,173 – 20,230,289	- - - - - - - - -	10326	20,230,173 – 20,230,289	+	5	116	96.72	-1.78	0.89	0.966394
6477	2R_DroMel_CAF1	20,230,173 – 20,230,289	- - - - - - - - -	10327	20,230,173 – 20,230,289	-	5	116	96.72	-1.23	0.92	0.696396
6478	2R_DroMel_CAF1	20,230,429 – 20,230,539	- - - - - - - - -	10328	20,230,429 – 20,230,539	+	3	110	94.55	-2.07	0.87	0.696501
6479	2R_DroMel_CAF1	20,231,348 – 20,231,458	- - - - - - - - -	10329	20,231,348 – 20,231,458	+	5	120	74.09	-1.80	0.45	0.661296
6480	2R_DroMel_CAF1	20,232,928 – 20,233,019	- - - "knownCDS=Parent=FBtr0100033;Name=CG33988-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33988-RA" - - - - -	10330	20,232,928 – 20,233,019	-	6	120	79.83	-1.67	0.77	0.861314
6481	2R_DroMel_CAF1	20,233,090 – 20,233,190	- - - "knownCDS=Parent=FBtr0100033;Name=CG33988-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33988-RA" - - - - -	10331	20,233,090 – 20,233,190	-	6	106	92.94	-1.58	0.88	0.847268
6482	2R_DroMel_CAF1	20,234,163 – 20,234,320	- - - - - - - - -	10332	20,234,163 – 20,234,283	-	6	120	99.50	-0.69	0.99	0.632228
6482	2R_DroMel_CAF1	20,234,163 – 20,234,320	- - - - - - - - -	10333	20,234,203 – 20,234,320	-	6	120	97.29	-0.68	0.98	0.597719
6483	2R_DroMel_CAF1	20,234,836 – 20,234,938	- - - - - - - - -	10334	20,234,836 – 20,234,938	-	6	115	81.56	-1.39	0.67	0.514843
6484	2R_DroMel_CAF1	20,235,331 – 20,235,459	- - - - - - - - -	10335	20,235,331 – 20,235,421	+	3	90	90.37	-1.90	0.87	0.681256
				10336	20,235,331 – 20,235,421	-	3	90	90.37	-2.77	0.95	0.988071
				10337	20,235,354 – 20,235,459	+	3	105	85.03	-3.06	0.78	0.966426
6485	2R_DroMel_CAF1	20,243,788 – 20,243,899	- - - - - - - - -	10338	20,243,788 – 20,243,899	+	5	120	89.83	-3.75	0.62	0.686107
6486	2R_DroMel_CAF1	20,246,198 – 20,246,290	- - - - - - - - -	10339	20,246,198 – 20,246,290	-	6	114	82.48	-1.48	0.73	0.574071
6487	2R_DroMel_CAF1	20,248,884 – 20,249,004	- - - - - - - - -	10340	20,248,884 – 20,249,004	+	6	120	83.46	-1.82	0.79	0.706222
6488	2R_DroMel_CAF1	20,256,291 – 20,256,382	- - - - - - - - -	10341	20,256,291 – 20,256,382	+	4	94	73.74	-1.84	0.60	0.870330
6489	2R_DroMel_CAF1	20,263,052 – 20,263,145	- - - "knownCDS=Parent=FBtr0072369;Name=CG30421-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30421-RA" - - - - -	10342	20,263,052 – 20,263,145	-	6	96	86.10	-1.95	0.82	0.682034
6490	2R_DroMel_CAF1	20,264,251 – 20,264,353	- - - - - - - - -	10343	20,264,251 – 20,264,353	-	5	102	94.80	-1.63	0.84	0.870128
6491	2R_DroMel_CAF1	20,278,238 – 20,278,329	- - - - - - - - -	10344	20,278,238 – 20,278,329	-	5	91	92.74	-1.58	0.91	0.964596
6492	2R_DroMel_CAF1	20,280,048 – 20,280,152	- - - "knownCDS=Parent=FBtr0072433, FBtr0072434, FBtr0072435;Name=Eps-15-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16932-RC, FlyBase+Annotation+IDs:CG16932-RB, FlyBase+Annotation+IDs:CG16932-RA" - - - - -	10345	20,280,048 – 20,280,152	-	6	108	78.26	-1.46	0.67	0.768761
6493	2R_DroMel_CAF1	20,282,484 – 20,282,589	- - - "knownCDS=Parent=FBtr0072433, FBtr0072434, FBtr0072435;Name=Eps-15-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16932-RC, FlyBase+Annotation+IDs:CG16932-RB, FlyBase+Annotation+IDs:CG16932-RA" - - - - -	10346	20,282,484 – 20,282,589	-	6	107	77.51	-1.56	0.57	0.538638
6494	2R_DroMel_CAF1	20,284,861 – 20,284,969	- - - "knownCDS=Parent=FBtr0072432;Name=CG30426-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30426-RA" - - - - -	10347	20,284,861 – 20,284,969	-	6	114	79.60	-2.49	0.51	0.857719
6495	2R_DroMel_CAF1	20,297,810 – 20,297,916	- - - - - - - - -	10348	20,297,810 – 20,297,916	+	5	109	91.57	-1.28	0.88	0.659886
6496	2R_DroMel_CAF1	20,300,168 – 20,300,266	- - - - - - - - -	10349	20,300,168 – 20,300,266	+	5	98	84.83	-1.84	0.66	0.588756
6497	2R_DroMel_CAF1	20,304,828 – 20,304,922	- - - - - - - - -	10350	20,304,828 – 20,304,922	+	6	94	70.42	-2.04	0.78	0.990914
6497	2R_DroMel_CAF1	20,304,828 – 20,304,922	- - - - - - - - -	10351	20,304,828 – 20,304,922	-	6	94	70.42	-1.42	0.73	0.963251
6498	2R_DroMel_CAF1	20,306,930 – 20,307,031	- - - "knownCDS=Parent=FBtr0072377;Name=CG3611-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3611-RA" - - - - -	10352	20,306,930 – 20,307,031	+	6	106	77.08	-2.18	0.54	0.914261
6499	2R_DroMel_CAF1	20,316,633 – 20,316,723	- - - - - - - - -	10353	20,316,633 – 20,316,723	+	3	90	94.81	-2.85	0.89	0.939387
6500	2R_DroMel_CAF1	20,317,143 – 20,317,249	- - - - - - - - -	10354	20,317,143 – 20,317,249	-	6	106	81.21	-1.67	0.68	0.697573
6501	2R_DroMel_CAF1	20,320,197 – 20,320,300	- - - - - - - - -	10355	20,320,197 – 20,320,300	+	6	104	74.81	-2.24	0.40	0.841263
6502	2R_DroMel_CAF1	20,323,025 – 20,323,136	- - - "knownCDS=Parent=FBtr0072378, FBtr0072379;Name=Dll-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3629-RB, FlyBase+Annotation+IDs:CG3629-RA" - - - - -	10356	20,323,025 – 20,323,136	+	6	120	78.40	-1.95	0.55	0.755011
6502	2R_DroMel_CAF1	20,323,025 – 20,323,136		10357	20,323,025 – 20,323,136	-	6	120	78.40	-1.84	0.67	0.899838
6503	2R_DroMel_CAF1	20,326,543 – 20,326,637	- - - - - - - - -	10358	20,326,543 – 20,326,637	-	6	107	77.82	-2.14	0.50	0.788379
6504	2R_DroMel_CAF1	20,328,332 – 20,328,437	- - - - - - - - -	10359	20,328,332 – 20,328,437	+	6	116	79.76	-1.23	0.67	0.535163
6505	2R_DroMel_CAF1	20,328,667 – 20,328,771	- - - - - - - - -	10360	20,328,667 – 20,328,771	+	5	110	87.05	-1.62	0.71	0.505921
6506	2R_DroMel_CAF1	20,335,119 – 20,335,217	- - - - - - - - -	10361	20,335,119 – 20,335,217	+	6	114	79.10	-2.39	0.60	0.935964
6506	2R_DroMel_CAF1	20,335,119 – 20,335,217	- - - - - - - - -	10362	20,335,119 – 20,335,217	-	6	114	79.10	-1.53	0.69	0.791276
6507	2R_DroMel_CAF1	20,335,477 – 20,335,567	- - - - - - - - -	10363	20,335,477 – 20,335,567	+	6	117	79.19	-2.92	0.45	0.923471
6507	2R_DroMel_CAF1	20,335,477 – 20,335,567	- - - - - - - - -	10364	20,335,477 – 20,335,567	-	6	117	79.19	-3.76	0.56	0.990617
6508	2R_DroMel_CAF1	20,341,539 – 20,341,649	- - - "knownCDS=Parent=FBtr0072378;Name=Dll-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3629-RB" - - - - -	10365	20,341,539 – 20,341,649	-	6	112	75.10	-1.45	0.73	0.937167
6509	2R_DroMel_CAF1	20,344,847 – 20,344,941	- - - - - - - - -	10366	20,344,847 – 20,344,941	-	4	102	82.99	-1.64	0.66	0.561041
6510	2R_DroMel_CAF1	20,347,533 – 20,347,623	- - - - - - - - -	10367	20,347,533 – 20,347,623	+	6	94	81.84	-1.59	0.71	0.654335
6511	2R_DroMel_CAF1	20,352,594 – 20,352,695	- - - - - - - - -	10368	20,352,594 – 20,352,695	+	5	109	72.57	-2.55	0.43	0.997093
6512	2R_DroMel_CAF1	20,353,476 – 20,353,577	- - - - - - - - -	10369	20,353,476 – 20,353,577	+	6	115	76.43	-2.16	0.39	0.568217
6512	2R_DroMel_CAF1	20,353,476 – 20,353,577	- - - - - - - - -	10370	20,353,476 – 20,353,577	-	6	115	76.43	-2.27	0.42	0.789600
6513	2R_DroMel_CAF1	20,362,499 – 20,362,592	- - - - - - - - -	10371	20,362,499 – 20,362,592	+	6	119	75.18	-0.99	0.70	0.637821
6514	2R_DroMel_CAF1	20,362,883 – 20,362,980	- - - - - - - - -	10372	20,362,883 – 20,362,980	-	4	98	85.71	-1.74	0.72	0.710520
6515	2R_DroMel_CAF1	20,366,805 – 20,366,923	- - - - - - - - -	10373	20,366,805 – 20,366,923	+	6	120	89.09	-1.88	0.84	0.698915
6515	2R_DroMel_CAF1	20,366,805 – 20,366,923	- - - - - - - - -	10374	20,366,805 – 20,366,923	-	6	120	89.09	-2.29	0.83	0.847349
6516	2R_DroMel_CAF1	20,366,991 – 20,367,103	- - - - - - - - -	10375	20,366,991 – 20,367,103	-	4	113	70.23	-2.15	0.50	0.940055
6517	2R_DroMel_CAF1	20,371,096 – 20,371,196	- - - - - - - - -	10376	20,371,096 – 20,371,196	+	6	111	76.13	-1.84	0.56	0.829541
6518	2R_DroMel_CAF1	20,372,295 – 20,372,393	- - - - - - - - -	10377	20,372,295 – 20,372,393	+	6	107	78.22	-1.57	0.58	0.553661
6519	2R_DroMel_CAF1	20,373,510 – 20,373,615	- - - - - - - - -	10378	20,373,510 – 20,373,615	+	6	120	79.82	-2.59	0.56	0.920731
6520	2R_DroMel_CAF1	20,375,072 – 20,375,163	- - - - - - - - -	10379	20,375,072 – 20,375,163	-	5	94	88.06	-1.60	0.72	0.508081
6521	2R_DroMel_CAF1	20,381,031 – 20,381,151	- - - "knownCDS=Parent=FBtr0072423;Name=CG16896-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16896-RA" - - - - -	10380	20,381,031 – 20,381,151	-	6	120	74.39	-1.24	0.66	0.733918
6522	2R_DroMel_CAF1	20,382,442 – 20,382,556	- - - - - - - - -	10381	20,382,442 – 20,382,556	+	5	119	85.29	-1.67	0.71	0.572135
6523	2R_DroMel_CAF1	20,385,834 – 20,385,951	- - - "knownCDS=Parent=FBtr0072382, FBtr0072381;Name=Atf-2-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30420-RB, FlyBase+Annotation+IDs:CG30420-RA" - - - - -	10382	20,385,834 – 20,385,951	-	6	117	79.89	-2.39	0.59	0.898343
6524	2R_DroMel_CAF1	20,390,350 – 20,390,442	- - - - - - - - -	10383	20,390,350 – 20,390,442	-	6	97	84.48	-1.74	0.75	0.514818
6525	2R_DroMel_CAF1	20,390,655 – 20,390,803	- - - "knownCDS=Parent=FBtr0072383, FBtr0072384, FBtr0072385;Name=CG9047-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9047-RB, FlyBase+Annotation+IDs:CG9047-RA, FlyBase+Annotation+IDs:CG9047-RC" - - - - -	10384	20,390,655 – 20,390,763	+	6	120	73.72	-1.08	0.64	0.500000
6525	2R_DroMel_CAF1	20,390,655 – 20,390,803		10385	20,390,683 – 20,390,803	+	6	120	85.83	-1.98	0.76	0.500000
6526	2R_DroMel_CAF1	20,395,735 – 20,395,890	- - - "knownCDS=Parent=FBtr0072386;Name=CG32836-cds, ;Dbxref=FlyBase+Annotation+IDs:CG32836-RA" - - - - -	10386	20,395,735 – 20,395,825	-	6	97	82.21	-2.14	0.72	0.801594
6526	2R_DroMel_CAF1	20,395,735 – 20,395,890		10387	20,395,785 – 20,395,890	-	6	120	82.79	-1.63	0.74	0.621623
6527	2R_DroMel_CAF1	20,403,391 – 20,403,489	- - - - - - - - -	10388	20,403,391 – 20,403,489	-	6	118	76.55	-2.00	0.62	0.946627
6528	2R_DroMel_CAF1	20,405,352 – 20,405,461	- - - - - - - - -	10389	20,405,352 – 20,405,461	-	5	120	82.00	-1.96	0.59	0.638564
6529	2R_DroMel_CAF1	20,411,623 – 20,411,719	- - - - - - - - -	10390	20,411,623 – 20,411,719	+	5	102	79.57	-2.25	0.52	0.873228
6530	2R_DroMel_CAF1	20,417,034 – 20,417,139	- - - "knownCDS=Parent=FBtr0072387;Name=NaCP60E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9071-RB" - - - - -	10391	20,417,034 – 20,417,139	+	6	110	80.74	-2.10	0.66	0.848327
6531	2R_DroMel_CAF1	20,417,551 – 20,417,666	- - - "knownCDS=Parent=FBtr0072387;Name=NaCP60E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9071-RB" - - - - -	10392	20,417,551 – 20,417,666	-	6	119	81.79	-1.79	0.61	0.549102
6532	2R_DroMel_CAF1	20,417,990 – 20,418,089	- - - "knownCDS=Parent=FBtr0072387;Name=NaCP60E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9071-RB" - - - - -	10393	20,417,990 – 20,418,089	+	6	108	83.53	-2.65	0.75	0.840739
6532	2R_DroMel_CAF1	20,417,990 – 20,418,089		10394	20,417,990 – 20,418,089	-	6	108	83.53	-2.33	0.74	0.759485
6533	2R_DroMel_CAF1	20,422,270 – 20,422,590	- - - "knownCDS=Parent=FBtr0072387, FBtr0072388;Name=NaCP60E-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9071-RB, FlyBase+Annotation+IDs:CG9071-RA" - - - - -	10395	20,422,270 – 20,422,390	+	6	120	96.22	-1.72	0.95	0.995649
				10396	20,422,270 – 20,422,390	-	6	120	96.22	-2.23	0.98	0.999865
				10397	20,422,310 – 20,422,430	+	6	120	95.06	-2.71	1.00	0.999990
				10398	20,422,310 – 20,422,430	-	6	120	95.06	-2.28	0.97	0.999847
				10399	20,422,350 – 20,422,470	+	6	120	95.22	-2.80	0.99	0.999989
				10400	20,422,350 – 20,422,470	-	6	120	95.22	-2.65	0.97	0.999952
				10401	20,422,390 – 20,422,510	+	6	120	97.72	-1.13	1.01	0.981342
				10402	20,422,390 – 20,422,510	-	6	120	97.72	-2.66	0.97	0.999948
				10403	20,422,430 – 20,422,550	+	6	120	97.06	-2.28	0.99	0.999936
				10404	20,422,430 – 20,422,550	-	6	120	97.06	-1.75	0.95	0.995969
				10405	20,422,470 – 20,422,590	+	6	120	93.22	-2.32	0.92	0.998359
				10406	20,422,470 – 20,422,590	-	6	120	93.22	-2.00	0.84	0.755957
6534	2R_DroMel_CAF1	20,426,280 – 20,426,388	- - "RNAmicro=f:20426280_t:20426394_strand:+_p:0.984885" - - - - - -	10407	20,426,280 – 20,426,388	+	5	115	93.64	-1.74	0.94	0.994892
6534	2R_DroMel_CAF1	20,426,280 – 20,426,388		10408	20,426,280 – 20,426,388	-	5	115	93.64	-1.95	0.91	0.996833
6535	2R_DroMel_CAF1	20,431,141 – 20,431,261	- - - "knownCDS=Parent=FBtr0072417;Name=pain-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15860-RA" - - - - -	10409	20,431,141 – 20,431,261	+	6	120	82.56	-1.61	0.66	0.522860
6536	2R_DroMel_CAF1	20,432,782 – 20,432,888	- - - - - - - - -	10410	20,432,782 – 20,432,888	-	6	107	80.97	-1.62	0.75	0.775307
6537	2R_DroMel_CAF1	20,433,094 – 20,433,188	- - - - - - - - -	10411	20,433,094 – 20,433,188	+	6	95	70.23	-2.27	0.38	0.956896
6538	2R_DroMel_CAF1	20,434,732 – 20,434,825	- - - - - - - - -	10412	20,434,732 – 20,434,825	+	5	106	64.74	-2.15	0.53	0.983361
6538	2R_DroMel_CAF1	20,434,732 – 20,434,825	- - - - - - - - -	10413	20,434,732 – 20,434,825	-	5	106	64.74	-1.99	0.33	0.606093
6539	2R_DroMel_CAF1	20,440,869 – 20,440,966	- - - - - - - - -	10414	20,440,869 – 20,440,966	-	6	114	78.05	-2.13	0.49	0.728038
6540	2R_DroMel_CAF1	20,450,248 – 20,450,351	- - - - - - - - -	10415	20,450,248 – 20,450,351	-	6	105	81.31	-1.80	0.61	0.575381
6541	2R_DroMel_CAF1	20,450,686 – 20,450,779	- - - - - - - - -	10416	20,450,686 – 20,450,779	+	5	103	71.33	-1.82	0.30	0.748254
6542	2R_DroMel_CAF1	20,456,225 – 20,456,347	- - - - - - - - -	10417	20,456,225 – 20,456,327	+	6	113	69.55	-1.56	0.45	0.500000
				10418	20,456,225 – 20,456,327	-	6	113	69.55	-1.91	0.46	0.909458
				10419	20,456,254 – 20,456,347	-	6	104	67.75	-1.99	0.44	0.938006
6543	2R_DroMel_CAF1	20,457,579 – 20,457,669	- - - "knownCDS=Parent=FBtr0072394;Name=CG12851-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12851-RA" - - - - -	10420	20,457,579 – 20,457,669	-	6	90	84.52	-1.84	0.78	0.603955
6544	2R_DroMel_CAF1	20,457,803 – 20,457,902	- - - "knownCDS=Parent=FBtr0072394;Name=CG12851-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12851-RA" - - - - -	10421	20,457,803 – 20,457,902	+	6	105	78.62	-1.77	0.57	0.689559
6544	2R_DroMel_CAF1	20,457,803 – 20,457,902		10422	20,457,803 – 20,457,902	-	6	105	78.62	-2.08	0.51	0.710145
6545	2R_DroMel_CAF1	20,458,189 – 20,458,300	- - - "knownCDS=Parent=FBtr0072394;Name=CG12851-cds, ;Dbxref=FlyBase+Annotation+IDs:CG12851-RA" - - - - -	10423	20,458,189 – 20,458,300	+	6	120	80.35	-2.24	0.62	0.861607
6546	2R_DroMel_CAF1	20,467,537 – 20,467,645	- - - - - - - - -	10424	20,467,537 – 20,467,645	+	6	117	74.52	-3.86	0.71	0.991045
6546	2R_DroMel_CAF1	20,467,537 – 20,467,645	- - - - - - - - -	10425	20,467,537 – 20,467,645	-	6	117	74.52	-2.81	0.58	0.996111
6547	2R_DroMel_CAF1	20,475,188 – 20,475,308	- - - - - - - - -	10426	20,475,188 – 20,475,308	-	3	120	79.41	-1.59	0.78	0.793600
6548	2R_DroMel_CAF1	20,476,683 – 20,476,868	- - - "knownCDS=Parent=FBtr0072405, FBtr0072406;Name=RpL19-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2746-RA, FlyBase+Annotation+IDs:CG2746-RB" - - - - -	10427	20,476,683 – 20,476,773	+	6	93	81.93	-1.75	0.70	0.694889
6548	2R_DroMel_CAF1	20,476,683 – 20,476,868		10428	20,476,773 – 20,476,868	-	6	98	80.17	-1.30	0.66	0.528429
6549	2R_DroMel_CAF1	20,477,387 – 20,477,479	- - - - - - - - -	10429	20,477,387 – 20,477,479	+	6	99	78.86	-2.13	0.50	0.689086
6550	2R_DroMel_CAF1	20,484,955 – 20,485,065	- - - "knownCDS=Parent=FBtr0072402;Name=emp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2727-RA" - - - - -	10430	20,484,955 – 20,485,065	-	6	120	80.72	-1.42	0.67	0.592749
6551	2R_DroMel_CAF1	20,485,786 – 20,485,894	- - - "knownCDS=Parent=FBtr0072402;Name=emp-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2727-RA" - - - - -	10431	20,485,786 – 20,485,894	-	6	115	76.42	-1.21	0.68	0.701673
6552	2R_DroMel_CAF1	20,491,703 – 20,491,805	- - - - - - - - -	10432	20,491,703 – 20,491,805	-	3	120	84.64	-1.79	0.79	0.630678
6553	2R_DroMel_CAF1	20,499,407 – 20,499,527	- - - "knownCDS=Parent=FBtr0072399;Name=zip-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15792-RA" - - - - -	10433	20,499,407 – 20,499,527	-	6	120	90.28	-1.36	0.95	0.924805
6554	2R_DroMel_CAF1	20,501,340 – 20,501,452	- - - "knownCDS=Parent=FBtr0100467;Name=zip-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15792-RD" - - - - -	10434	20,501,340 – 20,501,452	+	6	112	82.62	-2.06	0.60	0.515487
6555	2R_DroMel_CAF1	20,502,047 – 20,502,167	- - - "knownCDS=Parent=FBtr0100467;Name=zip-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15792-RD" - - - - -	10435	20,502,047 – 20,502,167	+	6	120	81.94	-2.01	0.60	0.595525
6556	2R_DroMel_CAF1	20,503,455 – 20,503,575	- - "RNAmicro=f:20503455_t:20503574_strand:+_p:0.758097" "knownCDS=Parent=FBtr0100467;Name=zip-cds, ;Dbxref=FlyBase+Annotation+IDs:CG15792-RD" - - - - -	10436	20,503,455 – 20,503,575	+	6	120	90.61	-1.68	0.85	0.661705
6557	2R_DroMel_CAF1	20,510,626 – 20,510,718	- - - - - - - - -	10437	20,510,626 – 20,510,718	+	5	92	90.65	-1.48	0.81	0.671253
6557	2R_DroMel_CAF1	20,510,626 – 20,510,718	- - - - - - - - -	10438	20,510,626 – 20,510,718	-	5	92	90.65	-1.54	0.76	0.545644
6558	2R_DroMel_CAF1	20,511,545 – 20,511,638	- - - - - - - - -	10439	20,511,545 – 20,511,638	+	5	93	90.97	-2.40	0.76	0.934304
6558	2R_DroMel_CAF1	20,511,545 – 20,511,638	- - - - - - - - -	10440	20,511,545 – 20,511,638	-	5	93	90.97	-2.07	0.89	0.996024
6559	2R_DroMel_CAF1	20,515,876 – 20,516,004	- - - - - - - - -	10441	20,515,876 – 20,515,971	+	4	95	86.82	-1.89	0.70	0.739006
6559	2R_DroMel_CAF1	20,515,876 – 20,516,004	- - - - - - - - -	10442	20,515,909 – 20,516,004	-	4	102	84.82	-1.45	0.71	0.521457
6560	2R_DroMel_CAF1	20,519,048 – 20,519,196	- - - - - - - - -	10443	20,519,048 – 20,519,168	+	5	120	85.82	-1.83	0.75	0.740639
				10444	20,519,048 – 20,519,168	-	5	120	85.82	-2.26	0.70	0.858254
				10445	20,519,088 – 20,519,196	-	5	120	73.90	-1.84	0.62	0.920842
6561	2R_DroMel_CAF1	20,519,680 – 20,519,771	- - - - - - - - -	10446	20,519,680 – 20,519,771	+	5	91	93.19	-1.23	0.93	0.794458
6562	2R_DroMel_CAF1	20,520,773 – 20,520,885	- - - - - - - - -	10447	20,520,773 – 20,520,885	+	6	120	81.87	-1.64	0.69	0.643539
6563	2R_DroMel_CAF1	20,521,037 – 20,521,172	- - - - - - - - -	10448	20,521,037 – 20,521,135	-	5	103	84.83	-2.10	0.63	0.649360
6563	2R_DroMel_CAF1	20,521,037 – 20,521,172	- - - - - - - - -	10449	20,521,077 – 20,521,172	-	4	95	86.99	-2.56	0.59	0.523459
6564	2R_DroMel_CAF1	20,521,782 – 20,521,899	- - - - - - - - -	10450	20,521,782 – 20,521,899	+	6	120	79.25	-1.72	0.56	0.542863
6565	2R_DroMel_CAF1	20,523,513 – 20,523,608	- - - - - - - - -	10451	20,523,513 – 20,523,608	-	3	103	81.08	-2.24	0.66	0.883912
6566	2R_DroMel_CAF1	20,525,135 – 20,525,264	- - - - - - - - -	10452	20,525,135 – 20,525,238	-	6	120	74.07	-1.81	0.46	0.618190
6566	2R_DroMel_CAF1	20,525,135 – 20,525,264	- - - - - - - - -	10453	20,525,164 – 20,525,264	-	6	120	72.92	-1.95	0.38	0.610071
6567	2R_DroMel_CAF1	20,526,186 – 20,526,284	- - - - - - - - -	10454	20,526,186 – 20,526,284	-	4	110	84.05	-1.57	0.76	0.619936
6568	2R_DroMel_CAF1	20,528,301 – 20,528,393	- - - - - - - - -	10455	20,528,301 – 20,528,393	-	5	92	98.04	-1.78	0.92	0.974223
6569	2R_DroMel_CAF1	20,528,739 – 20,528,842	- - - - - - - - -	10456	20,528,739 – 20,528,842	+	4	120	71.01	-2.21	0.43	0.726521
6570	2R_DroMel_CAF1	20,529,341 – 20,529,440	- - - - - - - - -	10457	20,529,341 – 20,529,440	+	5	108	73.19	-2.00	0.34	0.906561
6571	2R_DroMel_CAF1	20,534,489 – 20,534,646	- - - - - - - - -	10458	20,534,489 – 20,534,607	+	4	120	83.38	-1.86	0.65	0.695363
				10459	20,534,489 – 20,534,607	-	4	120	83.38	-2.66	0.64	0.948970
				10460	20,534,528 – 20,534,646	-	4	120	87.25	-1.67	0.80	0.734897
6572	2R_DroMel_CAF1	20,538,555 – 20,538,661	- - - - - - - - -	10461	20,538,555 – 20,538,661	-	6	113	79.79	-1.26	0.77	0.699940
6573	2R_DroMel_CAF1	20,540,197 – 20,540,287	- - - "knownCDS=Parent=FBtr0072443;Name=Nplp1-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3441-RA" - - - - -	10462	20,540,197 – 20,540,287	+	6	108	74.71	-1.69	0.61	0.889711
6574	2R_DroMel_CAF1	20,557,406 – 20,557,504	- - - - - - - - -	10463	20,557,406 – 20,557,504	-	6	101	78.62	-1.73	0.59	0.696931
6575	2R_DroMel_CAF1	20,563,931 – 20,564,028	- - - - - - - - -	10464	20,563,931 – 20,564,028	+	6	98	80.87	-1.59	0.64	0.603725
6576	2R_DroMel_CAF1	20,564,813 – 20,564,906	- - - - - - - - -	10465	20,564,813 – 20,564,906	-	5	106	88.83	-1.60	0.72	0.500000
6577	2R_DroMel_CAF1	20,571,535 – 20,571,629	- - - "knownCDS=Parent=FBtr0072444;Name=gsb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG3388-RA" - - - - -	10466	20,571,535 – 20,571,629	+	6	94	80.14	-1.95	0.60	0.755817
6578	2R_DroMel_CAF1	20,574,166 – 20,574,291	- - - - - - - - -	10467	20,574,166 – 20,574,273	+	6	118	76.79	-1.65	0.65	0.874069
				10468	20,574,166 – 20,574,273	-	6	118	76.79	-1.06	0.74	0.726638
				10469	20,574,195 – 20,574,291	+	6	100	78.97	-2.26	0.68	0.947568
				10470	20,574,195 – 20,574,291	-	6	100	78.97	-1.55	0.71	0.826553
6579	2R_DroMel_CAF1	20,575,129 – 20,575,302	- - - - - - - - -	10471	20,575,129 – 20,575,246	-	6	120	78.49	-1.60	0.60	0.661832
				10472	20,575,206 – 20,575,302	+	6	101	79.25	-1.93	0.62	0.837289
				10473	20,575,206 – 20,575,302	-	6	101	79.25	-1.58	0.69	0.807341
6580	2R_DroMel_CAF1	20,583,512 – 20,583,604	- - - - - - - - -	10474	20,583,512 – 20,583,604	+	5	94	74.06	-2.67	0.59	0.998618
6580	2R_DroMel_CAF1	20,583,512 – 20,583,604	- - - - - - - - -	10475	20,583,512 – 20,583,604	-	5	94	74.06	-3.32	0.73	0.999720
6581	2R_DroMel_CAF1	20,584,629 – 20,584,737	"known=tRNA_ID=Dmel\CR_TRNA_ATT_14000137; Name=Dmel_Ala_CGC_14000137;TFAMID=DmelACGC-20584648" "tRNAscan=type:Ala:anticodon:CGC f:20584647_t:20584736_strand=+_cove=76.51" - - "Rfam=AE003466.2/45871-45942_RF00005;tRNA;\|8e-35" - - - "Flybase=FBgn0050198:CR30198:cytosolic_tRNA_gene\|1e-36"	10476	20,584,629 – 20,584,737	+	6	119	77.89	-1.14	0.76	0.750932
6581	2R_DroMel_CAF1	20,584,629 – 20,584,737		10477	20,584,629 – 20,584,737	-	6	119	77.89	-1.01	0.71	0.554067
6582	2R_DroMel_CAF1	20,590,667 – 20,590,768	- - - - - - - - -	10478	20,590,667 – 20,590,768	-	3	106	83.97	-1.07	0.91	0.650027
6583	2R_DroMel_CAF1	20,592,182 – 20,592,274	- - - - - - - - -	10479	20,592,182 – 20,592,274	+	5	107	75.85	-1.66	0.21	0.638864
6584	2R_DroMel_CAF1	20,593,149 – 20,593,249	- - - - - - - - -	10480	20,593,149 – 20,593,249	-	5	108	73.87	-1.65	0.56	0.620970
6585	2R_DroMel_CAF1	20,594,610 – 20,594,730	- - - "knownCDS=Parent=FBtr0072457, FBtr0072458, FBtr0072456, FBtr0100126;Name=Tkr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16778-RB, FlyBase+Annotation+IDs:CG16778-RC, FlyBase+Annotation+IDs:CG16778-RA, FlyBase+Annotation+IDs:CG16778-RD" - - - - -	10481	20,594,610 – 20,594,730	+	6	120	82.89	-1.69	0.69	0.565896
6586	2R_DroMel_CAF1	20,595,246 – 20,595,348	- - - "knownCDS=Parent=FBtr0072457, FBtr0072458, FBtr0072456, FBtr0100126;Name=Tkr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16778-RB, FlyBase+Annotation+IDs:CG16778-RC, FlyBase+Annotation+IDs:CG16778-RA, FlyBase+Annotation+IDs:CG16778-RD" - - - - -	10482	20,595,246 – 20,595,348	+	6	111	79.68	-1.12	0.72	0.573180
6586	2R_DroMel_CAF1	20,595,246 – 20,595,348		10483	20,595,246 – 20,595,348	-	6	111	79.68	-1.51	0.70	0.766378
6587	2R_DroMel_CAF1	20,600,978 – 20,601,075	- - - - - - - - -	10484	20,600,978 – 20,601,075	-	6	98	84.79	-2.09	0.73	0.556395
6588	2R_DroMel_CAF1	20,602,263 – 20,602,368	- - - "knownCDS=Parent=FBtr0072457, FBtr0072458, FBtr0072456, FBtr0100126;Name=Tkr-cds, ;Dbxref=FlyBase+Annotation+IDs:CG16778-RB, FlyBase+Annotation+IDs:CG16778-RC, FlyBase+Annotation+IDs:CG16778-RA, FlyBase+Annotation+IDs:CG16778-RD" - - - - -	10485	20,602,263 – 20,602,368	+	6	111	79.13	-2.36	0.61	0.935399
6588	2R_DroMel_CAF1	20,602,263 – 20,602,368		10486	20,602,263 – 20,602,368	-	6	111	79.13	-3.20	0.60	0.983325
6589	2R_DroMel_CAF1	20,607,868 – 20,607,958	- - - - - - - - -	10487	20,607,868 – 20,607,958	+	5	90	96.67	-1.36	0.89	0.736982
6589	2R_DroMel_CAF1	20,607,868 – 20,607,958	- - - - - - - - -	10488	20,607,868 – 20,607,958	-	5	90	96.67	-1.72	0.93	0.984556
6590	2R_DroMel_CAF1	20,613,434 – 20,613,549	- - - - - - - - -	10489	20,613,434 – 20,613,549	-	5	115	97.39	-1.57	0.94	0.958462
6591	2R_DroMel_CAF1	20,616,984 – 20,617,076	- - - - - - - - -	10490	20,616,984 – 20,617,076	+	6	104	81.04	-2.74	0.43	0.554119
6592	2R_DroMel_CAF1	20,626,083 – 20,626,176	- - - - - - - - -	10491	20,626,083 – 20,626,176	+	5	107	87.45	-2.09	0.75	0.863557
6593	2R_DroMel_CAF1	20,629,468 – 20,629,562	- - - - - - - - -	10492	20,629,468 – 20,629,562	+	5	94	95.32	-2.19	0.93	0.999321
6594	2R_DroMel_CAF1	20,629,964 – 20,630,065	- - - - - - - - -	10493	20,629,964 – 20,630,065	+	5	101	95.45	-2.28	0.97	0.999827
6594	2R_DroMel_CAF1	20,629,964 – 20,630,065	- - - - - - - - -	10494	20,629,964 – 20,630,065	-	5	101	95.45	-1.58	0.90	0.951788
6595	2R_DroMel_CAF1	20,634,215 – 20,634,309	- - - - - - - - -	10495	20,634,215 – 20,634,309	+	6	103	64.21	-3.58	0.22	0.979629
6596	2R_DroMel_CAF1	20,634,375 – 20,634,468	- - - - - - - - -	10496	20,634,375 – 20,634,468	+	6	107	78.79	-1.60	0.58	0.566130
6597	2R_DroMel_CAF1	20,639,050 – 20,639,145	- - - - - - - - -	10497	20,639,050 – 20,639,145	+	6	99	83.74	-2.96	0.57	0.584988
6597	2R_DroMel_CAF1	20,639,050 – 20,639,145	- - - - - - - - -	10498	20,639,050 – 20,639,145	-	6	99	83.74	-3.97	0.69	0.926696
6598	2R_DroMel_CAF1	20,643,093 – 20,643,183	- - - - - - - - -	10499	20,643,093 – 20,643,183	+	5	96	73.08	-2.53	0.48	0.996848
6598	2R_DroMel_CAF1	20,643,093 – 20,643,183	- - - - - - - - -	10500	20,643,093 – 20,643,183	-	5	96	73.08	-1.72	0.44	0.552534
6599	2R_DroMel_CAF1	20,648,919 – 20,649,016	- - - - - - - - -	10501	20,648,919 – 20,649,016	+	6	105	79.61	-1.61	0.61	0.613885
6600	2R_DroMel_CAF1	20,673,333 – 20,673,424	- - - - - - - - -	10502	20,673,333 – 20,673,424	+	6	96	73.60	-2.14	0.45	0.921430
6601	2R_DroMel_CAF1	20,677,842 – 20,677,941	- - - - - - - - -	10503	20,677,842 – 20,677,941	-	6	113	78.07	-2.34	0.48	0.845695
6602	2R_DroMel_CAF1	20,683,429 – 20,683,527	- - - "knownCDS=Parent=FBtr0072454;Name=Peb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2668-RA" - - - - -	10504	20,683,429 – 20,683,527	+	3	98	74.36	-1.99	0.60	0.947844
6603	2R_DroMel_CAF1	20,684,135 – 20,684,236	- - - "knownCDS=Parent=FBtr0072454;Name=Peb-cds, ;Dbxref=FlyBase+Annotation+IDs:CG2668-RA" - - - - -	10505	20,684,135 – 20,684,236	-	6	102	80.97	-2.24	0.69	0.882347
6604	2R_DroMel_CAF1	20,687,307 – 20,687,407	- - - - - - - - -	10506	20,687,307 – 20,687,407	+	6	100	83.00	-1.59	0.80	0.646060
6604	2R_DroMel_CAF1	20,687,307 – 20,687,407	- - - - - - - - -	10507	20,687,307 – 20,687,407	-	6	100	83.00	-1.71	0.70	0.577068
6605	2R_DroMel_CAF1	20,690,604 – 20,690,704	- - - - - - - - -	10508	20,690,604 – 20,690,704	+	5	113	73.15	-1.68	0.07	0.813790
6606	2R_DroMel_CAF1	20,692,941 – 20,693,098	- - - "knownCDS=Parent=FBtr0072453;Name=CG9380-cds, ;Dbxref=FlyBase+Annotation+IDs:CG9380-RB" - - - - -	10509	20,692,941 – 20,693,058	+	6	120	79.77	-1.52	0.61	0.527410
6606	2R_DroMel_CAF1	20,692,941 – 20,693,098		10510	20,692,981 – 20,693,098	+	6	120	78.59	-2.18	0.60	0.914436
6607	2R_DroMel_CAF1	20,698,832 – 20,698,931	- - - - - - - - -	10511	20,698,832 – 20,698,931	+	5	120	75.88	-1.93	0.41	0.745080
6608	2R_DroMel_CAF1	20,700,431 – 20,700,589	- - - - - - - - -	10512	20,700,431 – 20,700,549	+	5	120	95.11	-1.66	0.84	0.879234
				10513	20,700,431 – 20,700,549	-	5	120	95.11	-1.85	0.97	0.998539
				10514	20,700,471 – 20,700,589	+	5	120	95.29	-1.18	0.90	0.612803
				10515	20,700,471 – 20,700,589	-	5	120	95.29	-1.57	0.79	0.514700
6609	2R_DroMel_CAF1	20,701,978 – 20,702,127	- - - - - - - - -	10516	20,701,978 – 20,702,097	-	5	120	90.15	-2.19	0.80	0.963814
6609	2R_DroMel_CAF1	20,701,978 – 20,702,127	- - - - - - - - -	10517	20,702,017 – 20,702,127	-	5	120	76.00	-1.71	0.55	0.590360
6610	2R_DroMel_CAF1	20,702,640 – 20,702,800	- - - - - - - - -	10518	20,702,640 – 20,702,760	+	5	120	97.83	-1.24	1.00	0.810270
				10519	20,702,640 – 20,702,760	-	5	120	97.83	-1.20	0.96	0.657803
				10520	20,702,680 – 20,702,800	-	5	120	96.83	-1.33	0.94	0.848243
6611	2R_DroMel_CAF1	20,703,325 – 20,703,445	- - - - - - - - -	10521	20,703,325 – 20,703,445	+	5	120	94.75	-1.46	0.86	0.814770
6612	2R_DroMel_CAF1	20,704,910 – 20,705,026	- - - - - - - - -	10522	20,704,910 – 20,705,026	+	5	120	85.37	-2.24	0.64	0.702187
6612	2R_DroMel_CAF1	20,704,910 – 20,705,026	- - - - - - - - -	10523	20,704,910 – 20,705,026	-	5	120	85.37	-1.72	0.69	0.570973
6613	2R_DroMel_CAF1	20,705,184 – 20,705,322	- - - - - - - - -	10524	20,705,184 – 20,705,284	+	5	120	84.49	-1.98	0.75	0.833086
				10525	20,705,184 – 20,705,284	-	5	120	84.49	-1.72	0.72	0.623288
				10526	20,705,217 – 20,705,322	-	5	120	76.53	-1.76	0.30	0.550597
6614	2R_DroMel_CAF1	20,706,002 – 20,706,122	- - - - - - - - -	10527	20,706,002 – 20,706,122	+	5	120	98.33	-1.70	0.97	0.982601
6614	2R_DroMel_CAF1	20,706,002 – 20,706,122	- - - - - - - - -	10528	20,706,002 – 20,706,122	-	5	120	98.33	-2.14	0.99	0.998897
6615	2R_DroMel_CAF1	20,706,242 – 20,706,361	- - - - - - - - -	10529	20,706,242 – 20,706,361	+	5	120	97.99	-1.39	0.94	0.830947
6616	2R_DroMel_CAF1	20,706,401 – 20,706,516	- - - - - - - - -	10530	20,706,401 – 20,706,516	+	5	120	91.97	-1.53	0.78	0.572114
6617	2R_DroMel_CAF1	20,706,621 – 20,706,717	- - - - - - - - -	10531	20,706,621 – 20,706,717	-	5	120	71.20	-1.71	0.12	0.695911
6618	2R_DroMel_CAF1	20,708,019 – 20,708,317	- - - - - - - - -	10532	20,708,019 – 20,708,129	-	5	120	91.36	-1.96	0.81	0.939608
				10533	20,708,059 – 20,708,169	+	4	120	88.20	-1.71	0.89	0.845268
				10534	20,708,059 – 20,708,169	-	4	120	88.20	-2.67	0.80	0.973511
				10535	20,708,099 – 20,708,209	+	5	120	89.80	-1.41	0.83	0.631634
				10536	20,708,099 – 20,708,209	-	5	120	89.80	-1.31	0.83	0.517004
				10537	20,708,129 – 20,708,249	-	5	120	92.17	-1.40	0.88	0.833380
				10538	20,708,209 – 20,708,317	+	4	116	92.64	-3.13	0.77	0.870293
6619	2R_DroMel_CAF1	20,709,826 – 20,709,940	- - - - - - - - -	10539	20,709,826 – 20,709,940	-	5	120	85.35	-1.61	0.73	0.554240
6620	2R_DroMel_CAF1	20,710,266 – 20,710,423	- - - - - - - - -	10540	20,710,266 – 20,710,386	+	5	120	87.73	-1.62	0.73	0.547396
6620	2R_DroMel_CAF1	20,710,266 – 20,710,423	- - - - - - - - -	10541	20,710,306 – 20,710,423	+	5	120	87.02	-2.05	0.66	0.559429
6621	2R_DroMel_CAF1	20,710,684 – 20,710,794	- - - - - - - - -	10542	20,710,684 – 20,710,794	-	5	120	89.05	-1.66	0.96	0.973440
6622	2R_DroMel_CAF1	20,710,874 – 20,711,108	- - - - - - - - -	10543	20,710,874 – 20,710,994	+	5	120	93.66	-1.73	0.86	0.959565
				10544	20,710,994 – 20,711,108	+	5	120	90.62	-1.71	0.78	0.748585
				10545	20,710,994 – 20,711,108	-	5	120	90.62	-1.93	0.73	0.665257
6623	2R_DroMel_CAF1	20,712,486 – 20,712,582	- - - - - - - - -	10546	20,712,486 – 20,712,582	+	4	99	87.84	-2.73	0.66	0.828209
6623	2R_DroMel_CAF1	20,712,486 – 20,712,582	- - - - - - - - -	10547	20,712,486 – 20,712,582	-	4	99	87.84	-2.33	0.64	0.629277
6624	2R_DroMel_CAF1	20,713,747 – 20,713,862	- - - - - - - - -	10548	20,713,747 – 20,713,862	-	5	120	91.95	-1.56	0.86	0.904338
6625	2R_DroMel_CAF1	20,714,261 – 20,714,420	- - - - - - - - -	10549	20,714,261 – 20,714,380	+	5	120	97.66	-2.92	0.96	0.999904
				10550	20,714,261 – 20,714,380	-	5	120	97.66	-4.03	1.00	0.999948
				10551	20,714,300 – 20,714,420	+	5	120	97.83	-1.35	0.97	0.873673
				10552	20,714,300 – 20,714,420	-	5	120	97.83	-1.69	0.93	0.970782
6626	2R_DroMel_CAF1	20,718,014 – 20,718,134	- - - - - - - - -	10553	20,718,014 – 20,718,134	+	5	120	92.58	-1.51	0.87	0.887640
6627	2R_DroMel_CAF1	20,719,929 – 20,720,042	- - - - - - - - -	10554	20,719,929 – 20,720,042	+	5	120	77.78	-1.66	0.58	0.500000
6628	2R_DroMel_CAF1	20,721,334 – 20,721,454	- - - - - - - - -	10555	20,721,334 – 20,721,454	+	5	120	91.75	-1.24	0.89	0.651396
6629	2R_DroMel_CAF1	20,722,350 – 20,722,502	- - - - - - - - -	10556	20,722,350 – 20,722,462	+	5	120	84.40	-1.91	0.65	0.613264
6629	2R_DroMel_CAF1	20,722,350 – 20,722,502	- - - - - - - - -	10557	20,722,388 – 20,722,502	+	5	120	84.91	-2.94	0.71	0.980260
6630	2R_DroMel_CAF1	20,722,662 – 20,722,812	- - - - - - - - -	10558	20,722,662 – 20,722,772	+	3	114	92.88	-2.75	0.83	0.853131
6630	2R_DroMel_CAF1	20,722,662 – 20,722,812	- - - - - - - - -	10559	20,722,692 – 20,722,812	+	5	120	81.94	-1.98	0.58	0.639536
6631	2R_DroMel_CAF1	20,722,874 – 20,722,994	- - - - - - - - -	10560	20,722,874 – 20,722,994	+	5	120	96.92	-1.61	0.95	0.978645
6632	2R_DroMel_CAF1	20,723,341 – 20,723,450	- - - - - - - - -	10561	20,723,341 – 20,723,450	+	5	120	88.25	-2.56	0.75	0.959156
6632	2R_DroMel_CAF1	20,723,341 – 20,723,450	- - - - - - - - -	10562	20,723,341 – 20,723,450	-	5	120	88.25	-2.12	0.80	0.945748
6633	2R_DroMel_CAF1	20,723,475 – 20,723,595	- - - - - - - - -	10563	20,723,475 – 20,723,595	+	5	120	98.00	-1.58	0.94	0.947510
6633	2R_DroMel_CAF1	20,723,475 – 20,723,595	- - - - - - - - -	10564	20,723,475 – 20,723,595	-	5	120	98.00	-1.77	0.89	0.944528
6634	2R_DroMel_CAF1	20,726,764 – 20,726,884	- - - - - - - - -	10565	20,726,764 – 20,726,884	-	5	120	98.33	-1.27	0.95	0.676769
6635	2R_DroMel_CAF1	20,727,003 – 20,727,157	- - - - - - - - -	10566	20,727,003 – 20,727,117	-	5	114	99.65	-1.35	0.98	0.710681
6635	2R_DroMel_CAF1	20,727,003 – 20,727,157	- - - - - - - - -	10567	20,727,043 – 20,727,157	+	5	114	97.72	-1.44	0.96	0.926540
6636	2R_DroMel_CAF1	20,728,041 – 20,728,143	- - - - - - - - -	10568	20,728,041 – 20,728,143	-	5	115	72.28	-1.61	0.56	0.639377
6637	2R_DroMel_CAF1	20,728,415 – 20,728,531	- - - - - - - - -	10569	20,728,415 – 20,728,531	-	3	120	79.67	-2.06	0.61	0.745234
6638	2R_DroMel_CAF1	20,728,921 – 20,729,041	- - - - - - - - -	10570	20,728,921 – 20,729,041	+	5	120	94.08	-2.14	0.84	0.984076
6639	2R_DroMel_CAF1	20,730,211 – 20,730,331	- - - - - - - - -	10571	20,730,211 – 20,730,331	-	5	120	91.42	-1.70	0.75	0.582761
6640	2R_DroMel_CAF1	20,730,469 – 20,730,621	- - - - - - - - -	10572	20,730,469 – 20,730,589	+	5	120	98.67	-2.09	0.95	0.995911
				10573	20,730,469 – 20,730,589	-	5	120	98.67	-2.13	0.96	0.996931
				10574	20,730,509 – 20,730,621	+	5	120	94.29	-1.09	0.91	0.516862
				10575	20,730,509 – 20,730,621	-	5	120	94.29	-2.11	0.91	0.998480
6641	2R_DroMel_CAF1	20,733,995 – 20,734,314	- - - - - - - - -	10576	20,733,995 – 20,734,114	+	5	120	95.15	-1.29	0.97	0.912676
				10577	20,733,995 – 20,734,114	-	5	120	95.15	-2.42	0.87	0.998356
				10578	20,734,114 – 20,734,234	-	5	120	95.75	-1.57	0.82	0.649207
				10579	20,734,154 – 20,734,274	+	5	120	98.83	-1.20	0.98	0.574357
				10580	20,734,154 – 20,734,274	-	5	120	98.83	-2.83	0.97	0.999725
				10581	20,734,194 – 20,734,314	-	5	120	97.83	-1.33	0.97	0.849553
6642	2R_DroMel_CAF1	20,738,442 – 20,738,549	- - - - - - - - -	10582	20,738,442 – 20,738,549	-	4	107	98.13	-1.87	0.97	0.762921
6643	2R_DroMel_CAF1	20,757,358 – 20,757,477	- - - "knownCDS=Parent=FBtr0091660;Name=CG33680-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33680-RA" - - - - -	10583	20,757,358 – 20,757,477	+	4	120	90.82	-1.60	0.85	0.721549
6644	2R_DroMel_CAF1	20,757,819 – 20,757,939	- - - "knownCDS=Parent=FBtr0091660;Name=CG33680-cds, ;Dbxref=FlyBase+Annotation+IDs:CG33680-RA" - - - - -	10584	20,757,819 – 20,757,939	+	4	120	89.17	-1.91	0.93	0.948337
6645	2R_DroMel_CAF1	20,759,345 – 20,759,505	- - - - - - - - -	10585	20,759,345 – 20,759,465	-	4	120	86.81	-1.68	0.77	0.716479
6645	2R_DroMel_CAF1	20,759,345 – 20,759,505	- - - - - - - - -	10586	20,759,385 – 20,759,505	-	4	120	93.33	-1.83	0.89	0.875255
6646	2R_DroMel_CAF1	20,761,806 – 20,761,926	- - - "knownCDS=Parent=FBtr0072451;Name=CG30428-cds, ;Dbxref=FlyBase+Annotation+IDs:CG30428-RA" - - - - -	10587	20,761,806 – 20,761,926	-	5	120	89.67	-1.96	0.74	0.761531

Generated by rnazIndex.pl (part of RNAz 1.0) on Thu Dec 14 19:07:37 2006