| Sequence ID | 2R_DroMel_CAF1 |
|---|---|
| Location | 7,492,183 – 7,492,277 |
| Length | 94 |
| Max. P | 0.581591 |
| Location | 7,492,183 – 7,492,277 |
|---|---|
| Length | 94 |
| Sequences | 3 |
| Columns | 94 |
| Reading direction | reverse |
| Mean pairwise identity | 94.33 |
| Mean single sequence MFE | -15.53 |
| Consensus MFE | -12.97 |
| Energy contribution | -13.63 |
| Covariance contribution | 0.67 |
| Combinations/Pair | 1.00 |
| Mean z-score | -2.10 |
| Structure conservation index | 0.83 |
| SVM decision value | 0.10 |
| SVM RNA-class probability | 0.581591 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>2R_DroMel_CAF1 7492183 94 - 20766785 UUUUCGGACCCGCCAUAUCCUUUUUCCGAUAGCAUCUCAGUCUCCUCUUCUAUUUCUGUACAUUCAGAAUCCGGGCCUUUUUUACAAUCGGAUU .....((.(((((..((((........))))))....................(((((......)))))...)))))................. ( -14.50) >DroSec_CAF1 5343 94 - 1 UCUGCGGACCCGCCAUAUUCUUUUUCCGAUACCAUCUCAGUAUCCUCUUCCAUUUCUGUACAUUCAGAAUCCGGGCCUUUUUUACAAUCUGAUU .....((.((((...............(((((.......))))).........(((((......)))))..))))))................. ( -16.60) >DroSim_CAF1 5374 94 - 1 UCUGCGGACCCACCAUAUUCUUUUUCCGAUACCAUCUCAGUAUCCUCUUCCAUUUCUGUACAUUCAGAAUCCGGGCCUUUUUUACAAUCGGAUU .....((.(((................(((((.......))))).........(((((......)))))...)))))................. ( -15.50) >consensus UCUGCGGACCCGCCAUAUUCUUUUUCCGAUACCAUCUCAGUAUCCUCUUCCAUUUCUGUACAUUCAGAAUCCGGGCCUUUUUUACAAUCGGAUU .....((.(((................(((((.......))))).........(((((......)))))...)))))................. (-12.97 = -13.63 + 0.67)
Generated by rnazCluster.pl (part of RNAz 1.0) on Mon Dec 4 10:18:07 2006