| Sequence ID | X_DroMel_CAF1 |
|---|---|
| Location | 1,498,841 – 1,498,933 |
| Length | 92 |
| Max. P | 0.717062 |
| Location | 1,498,841 – 1,498,933 |
|---|---|
| Length | 92 |
| Sequences | 3 |
| Columns | 92 |
| Reading direction | reverse |
| Mean pairwise identity | 100.00 |
| Mean single sequence MFE | -18.00 |
| Consensus MFE | -18.00 |
| Energy contribution | -18.00 |
| Covariance contribution | 0.00 |
| Combinations/Pair | 1.00 |
| Mean z-score | -1.58 |
| Structure conservation index | 1.00 |
| SVM decision value | 0.39 |
| SVM RNA-class probability | 0.717062 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>X_DroMel_CAF1 1498841 92 - 22224390 CAUUGGUUUCGAUUUGGAUUUUGAAAUUUUGGAAUUUUUUCAGAAUUUUUGAUUUAAUUUCAGUUGAUUUCAUGUGUGCAUUGCCGGAUGGU (((((((.......((.((..(((((((((((((((...(((((...)))))...))))))))..)))))))...)).))..))).)))).. ( -18.00) >DroSec_CAF1 23630 92 - 1 CAUUGGUUUCGAUUUGGAUUUUGAAAUUUUGGAAUUUUUUCAGAAUUUUUGAUUUAAUUUCAGUUGAUUUCAUGUGUGCAUUGCCGGAUGGU (((((((.......((.((..(((((((((((((((...(((((...)))))...))))))))..)))))))...)).))..))).)))).. ( -18.00) >DroSim_CAF1 8132 92 - 1 CAUUGGUUUCGAUUUGGAUUUUGAAAUUUUGGAAUUUUUUCAGAAUUUUUGAUUUAAUUUCAGUUGAUUUCAUGUGUGCAUUGCCGGAUGGU (((((((.......((.((..(((((((((((((((...(((((...)))))...))))))))..)))))))...)).))..))).)))).. ( -18.00) >consensus CAUUGGUUUCGAUUUGGAUUUUGAAAUUUUGGAAUUUUUUCAGAAUUUUUGAUUUAAUUUCAGUUGAUUUCAUGUGUGCAUUGCCGGAUGGU (((((((.......((.((..(((((((((((((((...(((((...)))))...))))))))..)))))))...)).))..))).)))).. (-18.00 = -18.00 + 0.00)
Generated by rnazCluster.pl (part of RNAz 1.0) on Mon Dec 4 09:46:30 2006