Overview on processed synteny regions for HOXB9_ENSG00000170689_2e5.protein.info

p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13
p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13
p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13
p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13
p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13
p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13
p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13
p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13
RankAlnOverviewAlnScoreRatioSumlogRatioSumfocalRatioSumTargetGenomechrstartPosendPoshitsCountqueryCovmeanIdentityoriscorecompara
1region1, score=6201620114.163.135.09Danio_rerio3 23033313 23036568 2 100% 72.7% 1 341.36 ortholog_one2one: hoxb9a
2region2, score=300830086.66-1.662.54Danio_rerio23 33742961 33744781 2 73.6% 64.9% 1 226.26 noComparaHits: hoxc9a
3region3, score=298229826.64-1.692.54Danio_rerio23 35245651 35247471 2 73.6% 64.9% -1 226.26 noComparaHits: hoxc9a
4region4, score=270227026.01-1.141.94Danio_rerio19 10511297 10512336 2 86.8% 51.4% 1 187.53 noComparaHits: hoxa9a
5region5, score=167816783.55-0.481.65Danio_rerio9 1948809 1949904 2 100% 45.9% -1 230.84 noComparaHits: hoxd9a
6region6, score=164716473.470.420.88Danio_rerio12
7region7, score=134213423-0.011.59Danio_rerio16 15965005 15966531 2 100% 49% -1 203.37 noComparaHits: hoxa9b
8region8, score=100310032.44-0.641.32Danio_rerio11 566902 568398 2 44% 46.4% 1 107.27 noComparaHits: hoxc11b

Data table for reference protein loci

QueryProtein(s)=ENSP00000309439 (contained in p10)
QueryGenome=Homo_sapiens
ref-loci geneNameprotIDtransIDgeneIDprotNamechrstartPosendPosmeanPosorinumExonsprotLengthselfscore
p1 HOXB1 ENSP00000355140 ENST00000239174 ENSG00000120094 HXB1_HUMAN 17 43961908 43963265 43962807 -1 2 301 587.08
p2 HOXB2 ENSP00000331741 ENST00000330070 ENSG00000173917 HXB2_HUMAN 17 43975429 43977272 43975960 -1 2 356 640.94
p3 HOXB3 ENSP00000308252 ENST00000311626 ENSG00000120093 HXB3_HUMAN 17 43982695 43984835 43983337 -1 2 431 769.07
p4 HOXB4 ENSP00000328928 ENST00000332503 ENSG00000182742 HXB4_HUMAN 17 44009083 44010680 44010297 -1 2 251 455.42
p5 HOXB5 ENSP00000239151 ENST00000239151 ENSG00000120075 HXB5_HUMAN 17 44024570 44026043 44025633 -1 2 269 503.29
p6 HOXB6 ENSP00000225648 ENST00000225648 ENSG00000108511 HXB6_HUMAN 17 44028774 44030511 44030170 -1 2 224 439.23
p7 - ENSP00000365889 ENST00000376699 ENSG00000204609 - 17 44034852 44038674 44038504 1 3 109 199.5
p8 HOXB7 ENSP00000239165 ENST00000239165 ENSG00000120087 HXB7_HUMAN 17 44040203 44043279 44042947 -1 2 217 404.02
p9 HOXB8 ENSP00000239144 ENST00000239144 ENSG00000120068 HXB8_HUMAN 17 44045563 44047065 44046694 -1 2 243 471.62
p10 HOXB9 ENSP00000309439 ENST00000311177 ENSG00000170689 HXB9_HUMAN 17 44055261 44058630 44058250 -1 2 250 478.31
p11 HOXB13 ENSP00000290295 ENST00000290295 ENSG00000159184 HXB13_HUMAN 17 44159151 44160954 44160523 -1 2 284 558.91
p12 TTLL6 ENSP00000302547 ENST00000305326 ENSG00000170703 NP_775894.1 17 44201350 44226596 44217497 -1 8 569 1082.44
p13 Q658K6_HUMAN ENSP00000365871 ENST00000376681 ENSG00000204606 Q658K6_HUMAN 17 44236656 44249439 44237177 -1 3 185 298.78
total length of ref-loci (on slice) = 287532 (29e4)

Parameter used for the loci-alignments

qLoci-Score_CutOff: 100 bits
qLoci-MaxProtOverlap: 40 aa
loci size factor: 2 (additional loci size constraint: 0 nt)
loci-grouping type: loci intervalls
max distance between non-highlighted (orange) target columns: 500000 nt
RelativeScore color index:
<=
33
<=
66
<=
100
<=
133
<=
166
<=
200
<=
233
<=
266
<=
300
<=
333
<=
366
<=
400
<=
433
<=
466
<=
500
<=
533
<=
566
<=
600
<=
633
<=
666
<=
700
<=
733
<=
766
<=
800
<=
833
<=
866
<=
900
<=
933
<=
966
<=
1000
relSc>1000
<=
33
<=
66
<=
100
<=
133
<=
166
<=
200
<=
233
<=
266
<=
300
<=
333
<=
366
<=
400
<=
433
<=
466
<=
500
<=
533
<=
566
<=
600
<=
633
<=
666
<=
700
<=
733
<=
766
<=
800
<=
833
<=
866
<=
900
<=
933
<=
966
<=
1000
relSc>1000
p1 p1, q1 p1, q2 p1, q3 p1, q4 p1, q5 p1, q6 p1, q7 p1, q8 p1, q9 p1, q10 p1, q11 p2 p2, q1 p2, q2 p2, q3 p2, q4 p2, q5 p2, q6 p2, q7 p2, q8 p2, q9 p2, q10 p2, q11 p3 p3, q1 p3, q2 p3, q3 p3, q4 p3, q5 p3, q6 p3, q7 p3, q8 p3, q9 p3, q10 p3, q11 p4 p4, q1 p4, q2 p4, q3 p4, q4 p4, q5 p4, q6 p4, q7 p4, q8 p4, q9 p4, q10 p4, q11 p5 p5, q1 p5, q2 p5, q3 p5, q4 p5, q5 p5, q6 p5, q7 p5, q8 p5, q9 p5, q10 p5, q11 p6 p6, q1 p6, q2 p6, q3 p6, q4 p6, q5 p6, q6 p6, q7 p6, q8 p6, q9 p6, q10 p6, q11 p7 p7, q1 p7, q2 p7, q3 p7, q4 p7, q5 p7, q6 p7, q7 p7, q8 p7, q9 p7, q10 p7, q11 p8 p8, q1 p8, q2 p8, q3 p8, q4 p8, q5 p8, q6 p8, q7 p8, q8 p8, q9 p8, q10 p8, q11 p9 p9, q1 p9, q2 p9, q3 p9, q4 p9, q5 p9, q6 p9, q7 p9, q8 p9, q9 p9, q10 p9, q11 p10 p10, q1 p10, q2 p10, q3 p10, q4 p10, q5 p10, q6 p10, q7 p10, q8 p10, q9 p10, q10 p10, q11 p11 p11, q1 p11, q2 p11, q3 p11, q4 p11, q5 p11, q6 p11, q7 p11, q8 p11, q9 p11, q10 p11, q11 p12 p12, q1 p12, q2 p12, q3 p12, q4 p12, q5 p12, q6 p12, q7 p12, q8 p12, q9 p12, q10 p12, q11 p13 p13, q1 p13, q2 p13, q3 p13, q4 p13, q5 p13, q6 p13, q7 p13, q8 p13, q9 p13, q10 p13, q11
p1 p1, q1 p1, q2 p1, q3 p1, q4 p1, q5 p1, q6 p1, q7 p1, q8 p1, q9 p1, q10 p1, q11 p2 p2, q1 p2, q2 p2, q3 p2, q4 p2, q5 p2, q6 p2, q7 p2, q8 p2, q9 p2, q10 p2, q11 p3 p3, q1 p3, q2 p3, q3 p3, q4 p3, q5 p3, q6 p3, q7 p3, q8 p3, q9 p3, q10 p3, q11 p4 p4, q1 p4, q2 p4, q3 p4, q4 p4, q5 p4, q6 p4, q7 p4, q8 p4, q9 p4, q10 p4, q11 p5 p5, q1 p5, q2 p5, q3 p5, q4 p5, q5 p5, q6 p5, q7 p5, q8 p5, q9 p5, q10 p5, q11 p6 p6, q1 p6, q2 p6, q3 p6, q4 p6, q5 p6, q6 p6, q7 p6, q8 p6, q9 p6, q10 p6, q11 p7 p7, q1 p7, q2 p7, q3 p7, q4 p7, q5 p7, q6 p7, q7 p7, q8 p7, q9 p7, q10 p7, q11 p8 p8, q1 p8, q2 p8, q3 p8, q4 p8, q5 p8, q6 p8, q7 p8, q8 p8, q9 p8, q10 p8, q11 p9 p9, q1 p9, q2 p9, q3 p9, q4 p9, q5 p9, q6 p9, q7 p9, q8 p9, q9 p9, q10 p9, q11 p10 p10, q1 p10, q2 p10, q3 p10, q4 p10, q5 p10, q6 p10, q7 p10, q8 p10, q9 p10, q10 p10, q11 p11 p11, q1 p11, q2 p11, q3 p11, q4 p11, q5 p11, q6 p11, q7 p11, q8 p11, q9 p11, q10 p11, q11 p12 p12, q1 p12, q2 p12, q3 p12, q4 p12, q5 p12, q6 p12, q7 p12, q8 p12, q9 p12, q10 p12, q11 p13 p13, q1 p13, q2 p13, q3 p13, q4 p13, q5 p13, q6 p13, q7 p13, q8 p13, q9 p13, q10 p13, q11
p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13

region 1
region1, score=6201 region1, score=6201 region1, score=6201
syntenyRegion: Danio_rerio.glob01.3.minQN4.fac2.01.blastresult [View in Ensembl]
retrieve target region: getEnsemblProteins.pl -h Danio_rerio -l 3 -i 22698860:23270974 -f 43e4 some_geneID_to_be_selected
scoreRatio_sum=14.16 log_scoreRatio_sum=3.13 focal_scoreRatio_sum=5.09
AlnScore=6201 (based on relative scores)
AlnType: reversed (decreasing chromosome positions)
QueryProtein(s)=ENSP00000309439 (contained in p10)
TargetGenome=Danio_rerio
ref-loci target-loci aln protIDgeneNameoptQloci target-loci scorechrstartPosendPosorihitsqueryCovmeanIdentityhitsLengthintra_intercomparaglobalRank
p1 q1 +/+ ENSP00000355140 HOXB1 q1 q1 208.66 3 23124674 23126266 1 2 90.4% 48.6% 852 0.69 / 0.64 = 1.08 noComparaHits: hoxb1a 1
p2 q2 +/+ ENSP00000331741 HOXB2 q2 q2 265.34 3 23107926 23109567 1 2 67.4% 64.8% 759 0.51 / 0.58 = 0.88 ortholog_one2one: hoxb2a 2
p3 q3 +/+ ENSP00000308252 HOXB3 q3 q3 535.68 3 23101788 23103710 1 2 94.9% 69.3% 1242 0.45 / 0.3 = 1.5 ortholog_one2one: hoxb3a 1
p4 q4 +/+ ENSP00000328928 HOXB4 q4 q4 291.38 3 23077620 23079249 1 2 96% 64.2% 696 0.43 / 0.36 = 1.19 ortholog_one2one: hoxb4a 1
p5 q5 +/+ ENSP00000239151 HOXB5 q5 q5 380.79 3 23063599 23065038 1 2 100% 74.2% 858 0.4 / 0.24 = 1.67 ortholog_one2many: hoxb5a 1
p6 q6 +/+ ENSP00000225648 HOXB6 q6 q6 298.42 3 23059516 23061253 1 2 100% 69.3% 687 0.46 / 0.32 = 1.44 ortholog_one2one: hoxb6a 1
p7 --- gapq ENSP00000365889 - noMatch --- - - - - - - - - - - - -
p8 q7 +/+ ENSP00000239165 HOXB7 q7 q7 238.22 3 23047659 23051564 1 2 100% 58.8% 681 0.41 / 0.41 = 1 ortholog_one2many: hoxb7a 1
p9 q8 +/+ ENSP00000239144 HOXB8 q8 q8 377.98 3 23044100 23045578 1 2 99.2% 78.9% 723 0.4 / 0.19 = 2.11 ortholog_one2many: hoxb8a 1
p10 q9 +/+ ENSP00000309439 HOXB9 q9 q9 341.36 3 23033313 23036568 1 2 100% 72.7% 759 0.52 / 0.28 = 1.86 ortholog_one2one: hoxb9a 1
--- q10 gapp - - - q10 - - - - - - - - - - - -
p11 q11 +/+ ENSP00000290295 HOXB13 q11 q11 319.89 3 23010205 23011476 1 2 94.7% 63.2% 828 0.6 / 0.42 = 1.43 ortholog_one2one: hoxb13a 1
p12 --- gape ENSP00000302547 TTLL6 noMatch --- - - - - - - - - - - - -
p13 --- gape ENSP00000365871 Q658K6_HUMAN noMatch --- - - - - - - - - - - - -
p1 p1, q1 p1, q2 p1, q3 p1, q4 p1, q5 p1, q6 p1, q7 p1, q8 p1, q9 p2 p2, q1 p2, q2 p2, q3 p2, q4 p2, q5 p2, q6 p2, q7 p2, q8 p2, q9 p3 p3, q1 p3, q2 p3, q3 p3, q4 p3, q5 p3, q6 p3, q7 p3, q8 p3, q9 p4 p4, q1 p4, q2 p4, q3 p4, q4 p4, q5 p4, q6 p4, q7 p4, q8 p4, q9 p5 p5, q1 p5, q2 p5, q3 p5, q4 p5, q5 p5, q6 p5, q7 p5, q8 p5, q9 p6 p6, q1 p6, q2 p6, q3 p6, q4 p6, q5 p6, q6 p6, q7 p6, q8 p6, q9 p7 p7, q1 p7, q2 p7, q3 p7, q4 p7, q5 p7, q6 p7, q7 p7, q8 p7, q9 p8 p8, q1 p8, q2 p8, q3 p8, q4 p8, q5 p8, q6 p8, q7 p8, q8 p8, q9 p9 p9, q1 p9, q2 p9, q3 p9, q4 p9, q5 p9, q6 p9, q7 p9, q8 p9, q9 p10 p10, q1 p10, q2 p10, q3 p10, q4 p10, q5 p10, q6 p10, q7 p10, q8 p10, q9 p11 p11, q1 p11, q2 p11, q3 p11, q4 p11, q5 p11, q6 p11, q7 p11, q8 p11, q9 p12 p12, q1 p12, q2 p12, q3 p12, q4 p12, q5 p12, q6 p12, q7 p12, q8 p12, q9 p13 p13, q1 p13, q2 p13, q3 p13, q4 p13, q5 p13, q6 p13, q7 p13, q8 p13, q9
p1 p1, q1 p1, q2 p1, q3 p1, q4 p1, q5 p1, q6 p1, q7 p1, q8 p1, q9 p2 p2, q1 p2, q2 p2, q3 p2, q4 p2, q5 p2, q6 p2, q7 p2, q8 p2, q9 p3 p3, q1 p3, q2 p3, q3 p3, q4 p3, q5 p3, q6 p3, q7 p3, q8 p3, q9 p4 p4, q1 p4, q2 p4, q3 p4, q4 p4, q5 p4, q6 p4, q7 p4, q8 p4, q9 p5 p5, q1 p5, q2 p5, q3 p5, q4 p5, q5 p5, q6 p5, q7 p5, q8 p5, q9 p6 p6, q1 p6, q2 p6, q3 p6, q4 p6, q5 p6, q6 p6, q7 p6, q8 p6, q9 p7 p7, q1 p7, q2 p7, q3 p7, q4 p7, q5 p7, q6 p7, q7 p7, q8 p7, q9 p8 p8, q1 p8, q2 p8, q3 p8, q4 p8, q5 p8, q6 p8, q7 p8, q8 p8, q9 p9 p9, q1 p9, q2 p9, q3 p9, q4 p9, q5 p9, q6 p9, q7 p9, q8 p9, q9 p10 p10, q1 p10, q2 p10, q3 p10, q4 p10, q5 p10, q6 p10, q7 p10, q8 p10, q9 p11 p11, q1 p11, q2 p11, q3 p11, q4 p11, q5 p11, q6 p11, q7 p11, q8 p11, q9 p12 p12, q1 p12, q2 p12, q3 p12, q4 p12, q5 p12, q6 p12, q7 p12, q8 p12, q9 p13 p13, q1 p13, q2 p13, q3 p13, q4 p13, q5 p13, q6 p13, q7 p13, q8 p13, q9
p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13

region 2
region2, score=3008 region2, score=3008 region2, score=3008
syntenyRegion: Danio_rerio.glob06.23.minQN4.fac2.02.blastresult [View in Ensembl]
retrieve target region: getEnsemblProteins.pl -h Danio_rerio -l 23 -i 33339417:33907039 -f 43e4 some_geneID_to_be_selected
scoreRatio_sum=6.66 log_scoreRatio_sum=-1.66 focal_scoreRatio_sum=2.54
AlnScore=3008 (based on relative scores)
AlnType: reversed (decreasing chromosome positions)
QueryProtein(s)=ENSP00000309439 (contained in p10)
TargetGenome=Danio_rerio
ref-loci target-loci aln protIDgeneNameoptQloci target-loci scorechrstartPosendPosorihitsqueryCovmeanIdentityhitsLengthintra_intercomparaglobalRank
p1 q1 +/+ ENSP00000355140 HOXB1 q1 q1 101.51 23 33830820 33831086 1 1 30.6% 62.1% 267 0.69 / 0.82 = 0.84 noComparaHits: hoxc1a 4
p2 --- gapq ENSP00000331741 HOXB2 noMatch --- - - - - - - - - - - - -
p3 q2 +/+ ENSP00000308252 HOXB3 q2 q2 123.46 23 33791828 33795648 1 2 29.9% 53.8% 387 0.45 / 0.83 = 0.54 noComparaHits: hoxc3a 4
p4 q3 +/+ ENSP00000328928 HOXB4 q3 q3 235.41 23 33778655 33779867 1 2 95.2% 56.4% 693 0.43 / 0.48 = 0.9 between_species_paralog: hoxc4a 2
p5 q4 +/+ ENSP00000239151 HOXB5 q4 q4 157.26 23 33766345 33767831 1 2 85.5% 42.7% 690 0.4 / 0.68 = 0.59 noComparaHits: hoxc5a 4
p6 q5 +/+ ENSP00000225648 HOXB6 q5 q5 173.1 23 33763064 33764345 1 2 100% 46.4% 672 0.46 / 0.6 = 0.77 noComparaHits: hoxc6a 4
p7 --- gapq ENSP00000365889 - noMatch --- - - - - - - - - - - - -
p8 --- gapq ENSP00000239165 HOXB7 q5 --- - - - - - - - - - - - -
p9 q6 +/+ ENSP00000239144 HOXB8 q6 q6 280.82 23 33749039 33751023 1 2 99.2% 61.2% 717 0.4 / 0.4 = 1 between_species_paralog: hoxc8a 3
p10 q7 +/+ ENSP00000309439 HOXB9 q7 q7 226.26 23 33742961 33744781 1 2 73.6% 64.9% 546 0.52 / 0.52 = 1 noComparaHits: hoxc9a 3
--- q8 gapp - - - q8 - - - - - - - - - - - -
p11 q9 +/+ ENSP00000290295 HOXB13 q9 q9 225.2 23 33701619 33704203 1 2 92.6% 48.5% 795 0.6 / 0.59 = 1.02 noComparaHits: hoxc13a 4
p12 --- gape ENSP00000302547 TTLL6 noMatch --- - - - - - - - - - - - -
p13 --- gape ENSP00000365871 Q658K6_HUMAN noMatch --- - - - - - - - - - - - -
p1 p1, q1 p1, q2 p1, q3 p1, q4 p1, q5 p1, q6 p1, q7 p1, q8 p1, q9 p1, q10 p2 p2, q1 p2, q2 p2, q3 p2, q4 p2, q5 p2, q6 p2, q7 p2, q8 p2, q9 p2, q10 p3 p3, q1 p3, q2 p3, q3 p3, q4 p3, q5 p3, q6 p3, q7 p3, q8 p3, q9 p3, q10 p4 p4, q1 p4, q2 p4, q3 p4, q4 p4, q5 p4, q6 p4, q7 p4, q8 p4, q9 p4, q10 p5 p5, q1 p5, q2 p5, q3 p5, q4 p5, q5 p5, q6 p5, q7 p5, q8 p5, q9 p5, q10 p6 p6, q1 p6, q2 p6, q3 p6, q4 p6, q5 p6, q6 p6, q7 p6, q8 p6, q9 p6, q10 p7 p7, q1 p7, q2 p7, q3 p7, q4 p7, q5 p7, q6 p7, q7 p7, q8 p7, q9 p7, q10 p8 p8, q1 p8, q2 p8, q3 p8, q4 p8, q5 p8, q6 p8, q7 p8, q8 p8, q9 p8, q10 p9 p9, q1 p9, q2 p9, q3 p9, q4 p9, q5 p9, q6 p9, q7 p9, q8 p9, q9 p9, q10 p10 p10, q1 p10, q2 p10, q3 p10, q4 p10, q5 p10, q6 p10, q7 p10, q8 p10, q9 p10, q10 p11 p11, q1 p11, q2 p11, q3 p11, q4 p11, q5 p11, q6 p11, q7 p11, q8 p11, q9 p11, q10 p12 p12, q1 p12, q2 p12, q3 p12, q4 p12, q5 p12, q6 p12, q7 p12, q8 p12, q9 p12, q10 p13 p13, q1 p13, q2 p13, q3 p13, q4 p13, q5 p13, q6 p13, q7 p13, q8 p13, q9 p13, q10
p1 p1, q1 p1, q2 p1, q3 p1, q4 p1, q5 p1, q6 p1, q7 p1, q8 p1, q9 p1, q10 p2 p2, q1 p2, q2 p2, q3 p2, q4 p2, q5 p2, q6 p2, q7 p2, q8 p2, q9 p2, q10 p3 p3, q1 p3, q2 p3, q3 p3, q4 p3, q5 p3, q6 p3, q7 p3, q8 p3, q9 p3, q10 p4 p4, q1 p4, q2 p4, q3 p4, q4 p4, q5 p4, q6 p4, q7 p4, q8 p4, q9 p4, q10 p5 p5, q1 p5, q2 p5, q3 p5, q4 p5, q5 p5, q6 p5, q7 p5, q8 p5, q9 p5, q10 p6 p6, q1 p6, q2 p6, q3 p6, q4 p6, q5 p6, q6 p6, q7 p6, q8 p6, q9 p6, q10 p7 p7, q1 p7, q2 p7, q3 p7, q4 p7, q5 p7, q6 p7, q7 p7, q8 p7, q9 p7, q10 p8 p8, q1 p8, q2 p8, q3 p8, q4 p8, q5 p8, q6 p8, q7 p8, q8 p8, q9 p8, q10 p9 p9, q1 p9, q2 p9, q3 p9, q4 p9, q5 p9, q6 p9, q7 p9, q8 p9, q9 p9, q10 p10 p10, q1 p10, q2 p10, q3 p10, q4 p10, q5 p10, q6 p10, q7 p10, q8 p10, q9 p10, q10 p11 p11, q1 p11, q2 p11, q3 p11, q4 p11, q5 p11, q6 p11, q7 p11, q8 p11, q9 p11, q10 p12 p12, q1 p12, q2 p12, q3 p12, q4 p12, q5 p12, q6 p12, q7 p12, q8 p12, q9 p12, q10 p13 p13, q1 p13, q2 p13, q3 p13, q4 p13, q5 p13, q6 p13, q7 p13, q8 p13, q9 p13, q10
p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13

region 3
region3, score=2982 region3, score=2982 region3, score=2982
syntenyRegion: Danio_rerio.glob05.23.minQN4.fac2.01.blastresult [View in Ensembl]
retrieve target region: getEnsemblProteins.pl -h Danio_rerio -l 23 -i 35106315:35678424 -f 43e4 some_geneID_to_be_selected
scoreRatio_sum=6.64 log_scoreRatio_sum=-1.69 focal_scoreRatio_sum=2.54
AlnScore=2982 (based on relative scores)
AlnType: normal (increasing chromosome positions)
QueryProtein(s)=ENSP00000309439 (contained in p10)
TargetGenome=Danio_rerio
ref-loci target-loci aln protIDgeneNameoptQloci target-loci scorechrstartPosendPosorihitsqueryCovmeanIdentityhitsLengthintra_intercomparaglobalRank
--- q1 gaps - - - q1 - - - - - - - - - - - -
p1 q2 +/+ ENSP00000355140 HOXB1 q1,q2 q2 101.51 23 35159191 35159457 -1 1 30.6% 62.1% 267 0.69 / 0.82 = 0.84 noComparaHits: hoxc1a 4
p2 --- gapq ENSP00000331741 HOXB2 noMatch --- - - - - - - - - - - - -
p3 q3 +/+ ENSP00000308252 HOXB3 q3 q3 103.62 23 35194743 35195060 -1 1 24.6% 56.9% 318 0.45 / 0.86 = 0.52 noComparaHits: hoxc3a 5
p4 q4 +/+ ENSP00000328928 HOXB4 q4 q4 235.41 23 35210616 35211828 -1 2 95.2% 56.4% 693 0.43 / 0.48 = 0.9 between_species_paralog: hoxc4a 2
p5 q5 +/+ ENSP00000239151 HOXB5 q5 q5 157.26 23 35222644 35224130 -1 2 85.5% 42.7% 690 0.4 / 0.68 = 0.59 noComparaHits: hoxc5a 4
p6 q6 +/+ ENSP00000225648 HOXB6 q6 q6 173.1 23 35226130 35227411 -1 2 100% 46.4% 672 0.46 / 0.6 = 0.77 noComparaHits: hoxc6a 4
p7 --- gapq ENSP00000365889 - noMatch --- - - - - - - - - - - - -
p8 --- gapq ENSP00000239165 HOXB7 q6 --- - - - - - - - - - - - -
p9 q7 +/+ ENSP00000239144 HOXB8 q7 q7 280.82 23 35239409 35241393 -1 2 99.2% 61.2% 717 0.4 / 0.4 = 1 between_species_paralog: hoxc8a 3
p10 q8 +/+ ENSP00000309439 HOXB9 q8 q8 226.26 23 35245651 35247471 -1 2 73.6% 64.9% 546 0.52 / 0.52 = 1 noComparaHits: hoxc9a 3
--- q9 gapp - - - q9 - - - - - - - - - - - -
p11 q10 +/+ ENSP00000290295 HOXB13 q10 q10 225.2 23 35287163 35289747 -1 2 92.6% 48.5% 795 0.6 / 0.59 = 1.02 noComparaHits: hoxc13a 4
p12 --- gape ENSP00000302547 TTLL6 noMatch --- - - - - - - - - - - - -
p13 --- gape ENSP00000365871 Q658K6_HUMAN noMatch --- - - - - - - - - - - - -
p1 p1, q1 p1, q2 p1, q3 p1, q4 p1, q5 p1, q6 p1, q7 p2 p2, q1 p2, q2 p2, q3 p2, q4 p2, q5 p2, q6 p2, q7 p3 p3, q1 p3, q2 p3, q3 p3, q4 p3, q5 p3, q6 p3, q7 p4 p4, q1 p4, q2 p4, q3 p4, q4 p4, q5 p4, q6 p4, q7 p5 p5, q1 p5, q2 p5, q3 p5, q4 p5, q5 p5, q6 p5, q7 p6 p6, q1 p6, q2 p6, q3 p6, q4 p6, q5 p6, q6 p6, q7 p7 p7, q1 p7, q2 p7, q3 p7, q4 p7, q5 p7, q6 p7, q7 p8 p8, q1 p8, q2 p8, q3 p8, q4 p8, q5 p8, q6 p8, q7 p9 p9, q1 p9, q2 p9, q3 p9, q4 p9, q5 p9, q6 p9, q7 p10 p10, q1 p10, q2 p10, q3 p10, q4 p10, q5 p10, q6 p10, q7 p11 p11, q1 p11, q2 p11, q3 p11, q4 p11, q5 p11, q6 p11, q7 p12 p12, q1 p12, q2 p12, q3 p12, q4 p12, q5 p12, q6 p12, q7 p13 p13, q1 p13, q2 p13, q3 p13, q4 p13, q5 p13, q6 p13, q7
p1 p1, q1 p1, q2 p1, q3 p1, q4 p1, q5 p1, q6 p1, q7 p2 p2, q1 p2, q2 p2, q3 p2, q4 p2, q5 p2, q6 p2, q7 p3 p3, q1 p3, q2 p3, q3 p3, q4 p3, q5 p3, q6 p3, q7 p4 p4, q1 p4, q2 p4, q3 p4, q4 p4, q5 p4, q6 p4, q7 p5 p5, q1 p5, q2 p5, q3 p5, q4 p5, q5 p5, q6 p5, q7 p6 p6, q1 p6, q2 p6, q3 p6, q4 p6, q5 p6, q6 p6, q7 p7 p7, q1 p7, q2 p7, q3 p7, q4 p7, q5 p7, q6 p7, q7 p8 p8, q1 p8, q2 p8, q3 p8, q4 p8, q5 p8, q6 p8, q7 p9 p9, q1 p9, q2 p9, q3 p9, q4 p9, q5 p9, q6 p9, q7 p10 p10, q1 p10, q2 p10, q3 p10, q4 p10, q5 p10, q6 p10, q7 p11 p11, q1 p11, q2 p11, q3 p11, q4 p11, q5 p11, q6 p11, q7 p12 p12, q1 p12, q2 p12, q3 p12, q4 p12, q5 p12, q6 p12, q7 p13 p13, q1 p13, q2 p13, q3 p13, q4 p13, q5 p13, q6 p13, q7
p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13

region 4
region4, score=2702 region4, score=2702 region4, score=2702
syntenyRegion: Danio_rerio.glob02.19.minQN4.fac2.01.blastresult [View in Ensembl]
retrieve target region: getEnsemblProteins.pl -h Danio_rerio -l 19 -i 10048565:10606208 -f 42e4 some_geneID_to_be_selected
scoreRatio_sum=6.01 log_scoreRatio_sum=-1.14 focal_scoreRatio_sum=1.94
AlnScore=2702 (based on relative scores)
AlnType: reversed (decreasing chromosome positions)
QueryProtein(s)=ENSP00000309439 (contained in p10)
TargetGenome=Danio_rerio
ref-loci target-loci aln protIDgeneNameoptQloci target-loci scorechrstartPosendPosorihitsqueryCovmeanIdentityhitsLengthintra_intercomparaglobalRank
p1 q1 +/+ ENSP00000355140 HOXB1 q1 q1 159.02 19 10547407 10548486 1 2 92% 40.3% 888 0.69 / 0.72 = 0.96 noComparaHits: hoxa1a 3
p2 q2 +/+ ENSP00000331741 HOXB2 q3 q2 117.48 19 10543546 10544456 1 2 45.5% 51.2% 447 0.51 / 0.81 = 0.63 noComparaHits: 6
p3 q3 +/+ ENSP00000308252 HOXB3 q3 q3 348.76 19 10538806 10540642 1 2 92.8% 52.5% 1206 0.45 / 0.54 = 0.83 between_species_paralog: hoxa3a 3
p4 q4 +/+ ENSP00000328928 HOXB4 q4 q4 205.84 19 10528752 10529876 1 2 94% 52.3% 678 0.43 / 0.54 = 0.8 between_species_paralog: hoxa4a 4
p5 q5 +/+ ENSP00000239151 HOXB5 q5 q5 260.76 19 10520701 10522002 1 2 100% 55.1% 801 0.4 / 0.48 = 0.83 between_species_paralog: hoxa5a 3
p6 --- gapq ENSP00000225648 HOXB6 q5 --- - - - - - - - - - - - -
p7 --- gapq ENSP00000365889 - noMatch --- - - - - - - - - - - - -
p8 --- gapq ENSP00000239165 HOXB7 q5 --- - - - - - - - - - - - -
p9 --- gapq ENSP00000239144 HOXB8 q5 --- - - - - - - - - - - - -
p10 q6 +/+ ENSP00000309439 HOXB9 q6 q6 187.53 19 10511297 10512336 1 2 86.8% 51.4% 630 0.52 / 0.6 = 0.87 noComparaHits: hoxa9a 5
p11 q7 +/+ ENSP00000290295 HOXB13 q7 q7 247.73 19 10490805 10491773 1 2 92.6% 51.3% 822 0.6 / 0.55 = 1.09 between_species_paralog: hoxa13a 3
p12 --- gape ENSP00000302547 TTLL6 noMatch --- - - - - - - - - - - - -
p13 --- gape ENSP00000365871 Q658K6_HUMAN noMatch --- - - - - - - - - - - - -
p1 p1, q1 p1, q2 p1, q3 p1, q4 p1, q5 p2 p2, q1 p2, q2 p2, q3 p2, q4 p2, q5 p3 p3, q1 p3, q2 p3, q3 p3, q4 p3, q5 p4 p4, q1 p4, q2 p4, q3 p4, q4 p4, q5 p5 p5, q1 p5, q2 p5, q3 p5, q4 p5, q5 p6 p6, q1 p6, q2 p6, q3 p6, q4 p6, q5 p7 p7, q1 p7, q2 p7, q3 p7, q4 p7, q5 p8 p8, q1 p8, q2 p8, q3 p8, q4 p8, q5 p9 p9, q1 p9, q2 p9, q3 p9, q4 p9, q5 p10 p10, q1 p10, q2 p10, q3 p10, q4 p10, q5 p11 p11, q1 p11, q2 p11, q3 p11, q4 p11, q5 p12 p12, q1 p12, q2 p12, q3 p12, q4 p12, q5 p13 p13, q1 p13, q2 p13, q3 p13, q4 p13, q5
p1 p1, q1 p1, q2 p1, q3 p1, q4 p1, q5 p2 p2, q1 p2, q2 p2, q3 p2, q4 p2, q5 p3 p3, q1 p3, q2 p3, q3 p3, q4 p3, q5 p4 p4, q1 p4, q2 p4, q3 p4, q4 p4, q5 p5 p5, q1 p5, q2 p5, q3 p5, q4 p5, q5 p6 p6, q1 p6, q2 p6, q3 p6, q4 p6, q5 p7 p7, q1 p7, q2 p7, q3 p7, q4 p7, q5 p8 p8, q1 p8, q2 p8, q3 p8, q4 p8, q5 p9 p9, q1 p9, q2 p9, q3 p9, q4 p9, q5 p10 p10, q1 p10, q2 p10, q3 p10, q4 p10, q5 p11 p11, q1 p11, q2 p11, q3 p11, q4 p11, q5 p12 p12, q1 p12, q2 p12, q3 p12, q4 p12, q5 p13 p13, q1 p13, q2 p13, q3 p13, q4 p13, q5
p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13

region 5
region5, score=1678 region5, score=1678 region5, score=1678
syntenyRegion: Danio_rerio.glob03.9.minQN4.fac2.01.blastresult [View in Ensembl]
retrieve target region: getEnsemblProteins.pl -h Danio_rerio -l 9 -i 1918429:2457471 -f 40e4 some_geneID_to_be_selected
scoreRatio_sum=3.55 log_scoreRatio_sum=-0.48 focal_scoreRatio_sum=1.65
AlnScore=1678 (based on relative scores)
AlnType: normal (increasing chromosome positions)
QueryProtein(s)=ENSP00000309439 (contained in p10)
TargetGenome=Danio_rerio
ref-loci target-loci aln protIDgeneNameoptQloci target-loci scorechrstartPosendPosorihitsqueryCovmeanIdentityhitsLengthintra_intercomparaglobalRank
p1 --- gaps ENSP00000355140 HOXB1 noMatch --- - - - - - - - - - - - -
p2 --- gaps ENSP00000331741 HOXB2 q1 --- - - - - - - - - - - - -
p3 q1 +/+ ENSP00000308252 HOXB3 q1 q1 366.71 9 1921957 1923358 -1 2 94% 53.9% 1182 0.45 / 0.52 = 0.87 between_species_paralog: hoxd3a 2
p4 q2 +/+ ENSP00000328928 HOXB4 q2 q2 224.85 9 1933951 1934984 -1 2 91.6% 55.8% 645 0.43 / 0.5 = 0.86 between_species_paralog: hoxd4a 3
p5 --- gapq ENSP00000239151 HOXB5 q2 --- - - - - - - - - - - - -
p6 --- gapq ENSP00000225648 HOXB6 q2 --- - - - - - - - - - - - -
p7 --- gapq ENSP00000365889 - noMatch --- - - - - - - - - - - - -
p8 --- gapq ENSP00000239165 HOXB7 q2 --- - - - - - - - - - - - -
p9 --- gapq ENSP00000239144 HOXB8 q2 --- - - - - - - - - - - - -
p10 q3 +/+ ENSP00000309439 HOXB9 q3 q3 230.84 9 1948809 1949904 -1 2 100% 45.9% 852 0.52 / 0.51 = 1.02 noComparaHits: hoxd9a 2
--- q4 gapp - - - q4 - - - - - - - - - - - -
p11 q5 +/+ ENSP00000290295 HOXB13 q5 q5 138.6 9 1971944 1974424 -1 2 74.6% 39.8% 636 0.6 / 0.75 = 0.8 noComparaHits: hoxd13a 6
p12 --- gape ENSP00000302547 TTLL6 noMatch --- - - - - - - - - - - - -
p13 --- gape ENSP00000365871 Q658K6_HUMAN noMatch --- - - - - - - - - - - - -
p1 p1, q1 p1, q2 p1, q3 p2 p2, q1 p2, q2 p2, q3 p3 p3, q1 p3, q2 p3, q3 p4 p4, q1 p4, q2 p4, q3 p5 p5, q1 p5, q2 p5, q3 p6 p6, q1 p6, q2 p6, q3 p7 p7, q1 p7, q2 p7, q3 p8 p8, q1 p8, q2 p8, q3 p9 p9, q1 p9, q2 p9, q3 p10 p10, q1 p10, q2 p10, q3 p11 p11, q1 p11, q2 p11, q3 p12 p12, q1 p12, q2 p12, q3 p13 p13, q1 p13, q2 p13, q3
p1 p1, q1 p1, q2 p1, q3 p2 p2, q1 p2, q2 p2, q3 p3 p3, q1 p3, q2 p3, q3 p4 p4, q1 p4, q2 p4, q3 p5 p5, q1 p5, q2 p5, q3 p6 p6, q1 p6, q2 p6, q3 p7 p7, q1 p7, q2 p7, q3 p8 p8, q1 p8, q2 p8, q3 p9 p9, q1 p9, q2 p9, q3 p10 p10, q1 p10, q2 p10, q3 p11 p11, q1 p11, q2 p11, q3 p12 p12, q1 p12, q2 p12, q3 p13 p13, q1 p13, q2 p13, q3
p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13

region 6
region6, score=1647 region6, score=1647 region6, score=1647
syntenyRegion: Danio_rerio.glob04.12.minQN4.fac2.01.blastresult [View in Ensembl]
retrieve target region: getEnsemblProteins.pl -h Danio_rerio -l 12 -i 26050802:26588724 -f 40e4 some_geneID_to_be_selected
scoreRatio_sum=3.47 log_scoreRatio_sum=0.42 focal_scoreRatio_sum=0.88
AlnScore=1647 (based on relative scores)
AlnType: normal (increasing chromosome positions)
QueryProtein(s)=ENSP00000309439 (contained in p10)
TargetGenome=Danio_rerio
ref-loci target-loci aln protIDgeneNameoptQloci target-loci scorechrstartPosendPosorihitsqueryCovmeanIdentityhitsLengthintra_intercomparaglobalRank
p1 q1 +/+ ENSP00000355140 HOXB1 q1 q1 192.81 12 26456229 26457229 -1 2 98.3% 41.7% 924 0.69 / 0.67 = 1.03 noComparaHits: hoxb1b 2
p2 --- gapq ENSP00000331741 HOXB2 noMatch --- - - - - - - - - - - - -
p3 --- gapq ENSP00000308252 HOXB3 noMatch --- - - - - - - - - - - - -
p4 --- gapq ENSP00000328928 HOXB4 q2 --- - - - - - - - - - - - -
p5 q2 +/+ ENSP00000239151 HOXB5 q2 q2 350.17 12 26467712 26468987 -1 2 99.6% 69.5% 825 0.4 / 0.3 = 1.33 ortholog_one2many: hoxb5b 2
p6 --- gapq ENSP00000225648 HOXB6 q2 --- - - - - - - - - - - - -
p7 --- gapq ENSP00000365889 - noMatch --- - - - - - - - - - - - -
p8 --- gapq ENSP00000239165 HOXB7 q3 --- - - - - - - - - - - - -
p9 q3 +/+ ENSP00000239144 HOXB8 q3 q3 300.18 12 26478779 26480927 -1 2 93% 66.4% 714 0.4 / 0.36 = 1.11 ortholog_one2many: hoxb8b 2
p10 --- gape ENSP00000309439 HOXB9 noMatch --- - - - - - - - - - - - -
p11 --- gape ENSP00000290295 HOXB13 noMatch --- - - - - - - - - - - - -
p12 --- gape ENSP00000302547 TTLL6 q3 --- - - - - - - - - - - - -
p13 --- gape ENSP00000365871 Q658K6_HUMAN noMatch --- - - - - - - - - - - - -
p1 p1, q1 p1, q2 p1, q3 p2 p2, q1 p2, q2 p2, q3 p3 p3, q1 p3, q2 p3, q3 p4 p4, q1 p4, q2 p4, q3 p5 p5, q1 p5, q2 p5, q3 p6 p6, q1 p6, q2 p6, q3 p7 p7, q1 p7, q2 p7, q3 p8 p8, q1 p8, q2 p8, q3 p9 p9, q1 p9, q2 p9, q3 p10 p10, q1 p10, q2 p10, q3 p11 p11, q1 p11, q2 p11, q3 p12 p12, q1 p12, q2 p12, q3 p13 p13, q1 p13, q2 p13, q3
p1 p1, q1 p1, q2 p1, q3 p2 p2, q1 p2, q2 p2, q3 p3 p3, q1 p3, q2 p3, q3 p4 p4, q1 p4, q2 p4, q3 p5 p5, q1 p5, q2 p5, q3 p6 p6, q1 p6, q2 p6, q3 p7 p7, q1 p7, q2 p7, q3 p8 p8, q1 p8, q2 p8, q3 p9 p9, q1 p9, q2 p9, q3 p10 p10, q1 p10, q2 p10, q3 p11 p11, q1 p11, q2 p11, q3 p12 p12, q1 p12, q2 p12, q3 p13 p13, q1 p13, q2 p13, q3
p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13

region 7
region7, score=1342 region7, score=1342 region7, score=1342
syntenyRegion: Danio_rerio.glob07.16.minQN4.fac2.01.blastresult [View in Ensembl]
retrieve target region: getEnsemblProteins.pl -h Danio_rerio -l 16 -i 15847888:16414264 -f 42e4 some_geneID_to_be_selected
scoreRatio_sum=3 log_scoreRatio_sum=-0.01 focal_scoreRatio_sum=1.59
AlnScore=1342 (based on relative scores)
AlnType: normal (increasing chromosome positions)
QueryProtein(s)=ENSP00000309439 (contained in p10)
TargetGenome=Danio_rerio
ref-loci target-loci aln protIDgeneNameoptQloci target-loci scorechrstartPosendPosorihitsqueryCovmeanIdentityhitsLengthintra_intercomparaglobalRank
p1 --- gaps ENSP00000355140 HOXB1 noMatch --- - - - - - - - - - - - -
p2 q1 +/+ ENSP00000331741 HOXB2 q1 q1 292.56 16 15953173 15954846 -1 3 70.8% 64.7% 744 0.51 / 0.54 = 0.94 between_species_paralog: hoxa2b 1
p3 --- gapq ENSP00000308252 HOXB3 q1 --- - - - - - - - - - - - -
p4 --- gapq ENSP00000328928 HOXB4 q1 --- - - - - - - - - - - - -
p5 --- gapq ENSP00000239151 HOXB5 noMatch --- - - - - - - - - - - - -
p6 --- gapq ENSP00000225648 HOXB6 noMatch --- - - - - - - - - - - - -
p7 --- gapq ENSP00000365889 - noMatch --- - - - - - - - - - - - -
p8 --- gapq ENSP00000239165 HOXB7 noMatch --- - - - - - - - - - - - -
p9 --- gapq ENSP00000239144 HOXB8 noMatch --- - - - - - - - - - - - -
p10 q2 +/+ ENSP00000309439 HOXB9 q2 q2 203.37 16 15965005 15966531 -1 2 100% 49% 735 0.52 / 0.57 = 0.91 noComparaHits: hoxa9b 4
p11 q3 +/+ ENSP00000290295 HOXB13 q3 q3 265.68 16 15984775 15985947 -1 2 91.5% 54.4% 762 0.6 / 0.52 = 1.15 between_species_paralog: hoxa13b 2
p12 --- gape ENSP00000302547 TTLL6 noMatch --- - - - - - - - - - - - -
p13 --- gape ENSP00000365871 Q658K6_HUMAN noMatch --- - - - - - - - - - - - -
p1 p1, q1 p1, q2 p1, q3 p2 p2, q1 p2, q2 p2, q3 p3 p3, q1 p3, q2 p3, q3 p4 p4, q1 p4, q2 p4, q3 p5 p5, q1 p5, q2 p5, q3 p6 p6, q1 p6, q2 p6, q3 p7 p7, q1 p7, q2 p7, q3 p8 p8, q1 p8, q2 p8, q3 p9 p9, q1 p9, q2 p9, q3 p10 p10, q1 p10, q2 p10, q3 p11 p11, q1 p11, q2 p11, q3 p12 p12, q1 p12, q2 p12, q3 p13 p13, q1 p13, q2 p13, q3
p1 p1, q1 p1, q2 p1, q3 p2 p2, q1 p2, q2 p2, q3 p3 p3, q1 p3, q2 p3, q3 p4 p4, q1 p4, q2 p4, q3 p5 p5, q1 p5, q2 p5, q3 p6 p6, q1 p6, q2 p6, q3 p7 p7, q1 p7, q2 p7, q3 p8 p8, q1 p8, q2 p8, q3 p9 p9, q1 p9, q2 p9, q3 p10 p10, q1 p10, q2 p10, q3 p11 p11, q1 p11, q2 p11, q3 p12 p12, q1 p12, q2 p12, q3 p13 p13, q1 p13, q2 p13, q3
p1 p2 p3 p4 p5 p6 p7 p8 p9 p10 p11 p12 p13

region 8
region8, score=1003 region8, score=1003 region8, score=1003
syntenyRegion: Danio_rerio.glob08.11.minQN4.fac2.01.blastresult [View in Ensembl]
retrieve target region: getEnsemblProteins.pl -h Danio_rerio -l 11 -i 44446:590840 -f 41e4 some_geneID_to_be_selected
scoreRatio_sum=2.44 log_scoreRatio_sum=-0.64 focal_scoreRatio_sum=1.32
AlnScore=1003 (based on relative scores)
AlnType: reversed (decreasing chromosome positions)
QueryProtein(s)=ENSP00000309439 (contained in p10)
TargetGenome=Danio_rerio
ref-loci target-loci aln protIDgeneNameoptQloci target-loci scorechrstartPosendPosorihitsqueryCovmeanIdentityhitsLengthintra_intercomparaglobalRank
p1 --- gaps ENSP00000355140 HOXB1 noMatch --- - - - - - - - - - - - -
p2 --- gaps ENSP00000331741 HOXB2 noMatch --- - - - - - - - - - - - -
p3 --- gaps ENSP00000308252 HOXB3 noMatch --- - - - - - - - - - - - -
p4 --- gaps ENSP00000328928 HOXB4 q1 --- - - - - - - - - - - - -
p5 --- gaps ENSP00000239151 HOXB5 q1 --- - - - - - - - - - - - -
p6 q1 +/+ ENSP00000225648 HOXB6 q1 q1 181.2 11 589745 590771 1 2 93.3% 49.5% 612 0.46 / 0.58 = 0.79 noComparaHits: hoxc6b 3
p7 --- gapq ENSP00000365889 - noMatch --- - - - - - - - - - - - -
p8 --- gapq ENSP00000239165 HOXB7 q1 --- - - - - - - - - - - - -
p9 --- gapq ENSP00000239144 HOXB8 noMatch --- - - - - - - - - - - - -
p10 q2 +/+ ENSP00000309439 HOXB9 q2 q2 107.27 11 566902 568398 1 2 44% 46.4% 327 0.52 / 0.77 = 0.68 noComparaHits: hoxc11b 8
p11 q3 +/+ ENSP00000290295 HOXB13 q3 q3 209.01 11 547360 549825 1 2 95.4% 46.6% 816 0.6 / 0.62 = 0.97 noComparaHits: hoxc13b 5
p12 --- gape ENSP00000302547 TTLL6 noMatch --- - - - - - - - - - - - -
p13 --- gape ENSP00000365871 Q658K6_HUMAN noMatch --- - - - - - - - - - - - -