# alignment results for HOXA9_ENSG00000078399_5e5.protein.info
# Columns are as follows
#region	alnScore	queryFile	targetGenome	targetChr	pNumber	qNumber	queryID	protID	geneName	optQloci	score	chr	startPos	endPos	ori	hits	queryCov	meanIdentity	hitsLength	intra_inter	compara	globalRank
##########################
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p1	---	ENSP00000005587	ENSP00000005587	SKAP2	noMatch
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p2	---	ENSP00000328286	ENSP00000328286	-	noMatch
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p3	q1	ENSP00000343246	ENSP00000343246	HOXA1	q1	328.34	19	10547332	10548513	1	2	98.2%	56%	993	0.69 / 0.46 = 1.5	ortholog_one2one:ENSDARG00000057721_(ENSDARP00000074910 [hoxa1a])	1
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p4	q2	ENSP00000222718	ENSP00000222718	HOXA2	q2	133.33	19	10543546	10544525	1	2	49.2%	48.9%	510	0.55 / 0.8 = 0.69	NOMATCH:	3
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p5	q3	ENSP00000324884	ENSP00000324884	HOXA3	q3	391.01	19	10538806	10540642	1	2	87.6%	57.9%	1149	0.26 / 0.25 = 1.04	ortholog_one2one:ENSDARG00000036231_(ENSDARP00000052632 [hoxa3a])	2
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p6	---	ENSP00000297027	ENSP00000297027	Q96MZ3_HUMAN	noMatch
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p7	q4	ENSP00000353151	ENSP00000353151	HOXA4	q4	191.4	19	10528761	10529933	1	2	74.4%	47.1%	723	0.59 / 0.69 = 0.86	ortholog_one2one:ENSDARG00000057724_(ENSDARP00000074915 [hoxa4a])	2
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p8	q5	ENSP00000222726	ENSP00000222726	HOXA5	q5	331.87	19	10520701	10522002	1	2	100%	66.5%	825	0.41 / 0.35 = 1.17	ortholog_one2one:ENSDARG00000001784_(ENSDARP00000023754 [hoxa5a])	1
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p9	---	ENSP00000222728	ENSP00000222728	HOXA6	q4
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p10	---	ENSP00000242159	ENSP00000242159	HOXA7	q5
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p11	q6	ENSP00000343619	ENSP00000343619	HOXA9	q6	181.55	19	10511297	10512339	1	2	63.2%	58%	501	0.55 / 0.65 = 0.85	NOMATCH:ENSDARG00000009461(ENSDARP00000009894 [hoxa9a]);	5
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p12	---	ENSP00000283921	ENSP00000283921	HOXA10	q6
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p13	q7	ENSP00000006015	ENSP00000006015	HOXA11	q7	337.14	19	10498422	10499983	1	2	91.7%	62.6%	858	0.25 / 0.1 = 2.5	ortholog_one2many:ENSDARG00000009045_(ENSDARP00000006348 [hoxa11a])	2
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p14	q8	ENSP00000222753	ENSP00000222753	HOXA13	q8	295.26	19	10490838	10491773	1	2	71.4%	60.2%	813	0.58 / 0.51 = 1.14	ortholog_one2many:ENSDARG00000007609_(ENSDARP00000003928 [hoxa13a])	1
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p15	q9	ENSP00000222761	ENSP00000222761	EVX1	q9	411.55	19	10480188	10482503	-1	3	95.3%	59.7%	1107	0.42 / 0.3 = 1.4	ortholog_one2one:ENSDARG00000005628_(ENSDARP00000052635 [evx1])	1
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p16	---	ENSP00000322111	ENSP00000322111	A4D198_HUMAN	noMatch
1	5581	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	19	p17	q10	ENSP00000265395	ENSP00000265395	HIBADH	q10	494.44	19	10363653	10418066	1	7	89.3%	72.9%	1047	0.86 / 0.24 = 3.58	ortholog_one2many:ENSDARG00000036236_(ENSDARP00000052638 [zgc:100804])	2
#
##################################################################
#
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p1	---	ENSP00000005587	ENSP00000005587	SKAP2	noMatch
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p2	---	ENSP00000328286	ENSP00000328286	-	noMatch
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p3	q1	ENSP00000343246	ENSP00000343246	HOXA1	q1	217.46	3	23124590	23126293	1	2	99.1%	45.1%	969	0.69 / 0.64 = 1.08	NOMATCH:ENSDARG00000008174(ENSDARP00000014577 [hoxb1a]);	2
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p4	q2	ENSP00000222718	ENSP00000222718	HOXA2	q2	299.12	3	23107926	23109945	1	2	99.5%	50.9%	1146	0.55 / 0.55 = 1	between_species_paralog:ENSDARG00000000175_(ENSDARP00000002878 [hoxb2a])	2
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p5	q3	ENSP00000324884	ENSP00000324884	HOXA3	q3	427.97	3	23101788	23103710	1	2	100%	56.2%	1245	0.26 / 0.18 = 1.44	between_species_paralog:ENSDARG00000029263_(ENSDARP00000072928 [hoxb3a])	1
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p6	---	ENSP00000297027	ENSP00000297027	Q96MZ3_HUMAN	noMatch
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p7	q4	ENSP00000353151	ENSP00000353151	HOXA4	q4	206.55	3	23077620	23079309	1	2	71.9%	51.9%	678	0.59 / 0.67 = 0.88	between_species_paralog:ENSDARG00000013533_(ENSDARP00000008458 [hoxb4a])	1
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p8	q5	ENSP00000222726	ENSP00000222726	HOXA5	q5	291.03	3	23063599	23065038	1	2	100%	58.8%	858	0.41 / 0.43 = 0.95	between_species_paralog:ENSDARG00000013057_(ENSDARP00000004270 [hoxb5a])	2
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p9	q6	ENSP00000222728	ENSP00000222728	HOXA6	q6	250.55	3	23059516	23061253	1	2	99.1%	59.1%	681	0.48 / 0.45 = 1.07	between_species_paralog:ENSDARG00000010630_(ENSDARP00000002263 [hoxb6a])	1
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p10	q8	ENSP00000242159	ENSP00000242159	HOXA7	q8	141.78	3	23044103	23045506	1	2	86.5%	44.1%	654	0.47 / 0.68 = 0.69	NOMATCH:ENSDARG00000056027(ENSDARP00000046637 [hoxb8a]);	4
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p11	q9	ENSP00000343619	ENSP00000343619	HOXA9	q9	212.88	3	23033313	23036568	1	2	82.7%	54.2%	621	0.55 / 0.59 = 0.93	NOMATCH:ENSDARG00000056023(ENSDARP00000007852 [hoxb9a],ENSDARP00000022169 [hoxb9a],ENSDARP00000053292);	4
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p12	q10	ENSP00000283921	ENSP00000283921	HOXA10	q10	131.43	3	23026693	23026944	1	1	21.1%	82.1%	252	0.65 / 0.8 = 0.81	NOMATCH:ENSDARG00000011579(ENSDARP00000016856 [hoxb10a]);	5
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p13	---	ENSP00000006015	ENSP00000006015	HOXA11	noMatch
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p14	q11	ENSP00000222753	ENSP00000222753	HOXA13	q11	280.82	3	23010358	23011476	1	2	62.9%	63.4%	690	0.58 / 0.53 = 1.09	between_species_paralog:ENSDARG00000056015_(ENSDARP00000072890 [hoxb13a])	2
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p15	q12	ENSP00000222761	ENSP00000222761	EVX1	q12	167.47	3	22998210	22999095	-1	2	45.7%	51.1%	537	0.42 / 0.71 = 0.59	NOMATCH:ENSDARG00000056012(ENSDARP00000072887 [eve1],ENSDARP00000094573);	3
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p16	---	ENSP00000322111	ENSP00000322111	A4D198_HUMAN	noMatch
2	4690	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	3	p17	---	ENSP00000265395	ENSP00000265395	HIBADH	noMatch
#
##################################################################
#
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p1	q1	ENSP00000005587	ENSP00000005587	SKAP2	q1	385.44	16	15905869	15946733	-1	8	69.9%	66%	804	0.59 / 0.48 = 1.23	ortholog_one2one:ENSDARG00000000906_(ENSDARP00000052659 [skap2])	1
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p2	---	ENSP00000328286	ENSP00000328286	-	noMatch
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p3	---	ENSP00000343246	ENSP00000343246	HOXA1	noMatch
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p4	q2	ENSP00000222718	ENSP00000222718	HOXA2	q2	473.02	16	15953161	15954846	-1	2	98.9%	71%	1071	0.55 / 0.3 = 1.83	ortholog_one2one:ENSDARG00000023031_(ENSDARP00000023072 [hoxa2b])	1
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p5	---	ENSP00000324884	ENSP00000324884	HOXA3	q2
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p6	---	ENSP00000297027	ENSP00000297027	Q96MZ3_HUMAN	noMatch
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p7	---	ENSP00000353151	ENSP00000353151	HOXA4	q2
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p8	---	ENSP00000222726	ENSP00000222726	HOXA5	noMatch
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p9	---	ENSP00000222728	ENSP00000222728	HOXA6	noMatch
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p10	---	ENSP00000242159	ENSP00000242159	HOXA7	noMatch
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p11	q3	ENSP00000343619	ENSP00000343619	HOXA9	q3	226.96	16	15965005	15966531	-1	2	99.6%	48.9%	774	0.55 / 0.57 = 0.96	NOMATCH:ENSDARG00000056819(ENSDARP00000073839,ENSDARP00000094425 [hoxa9b]);	3
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p12	q4	ENSP00000283921	ENSP00000283921	HOXA10	q4	237.87	16	15969590	15971748	-1	2	65.4%	56%	696	0.65 / 0.64 = 1.02	NOMATCH:ENSDARG00000031337(ENSDARP00000046765 [hoxa10b]);	1
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p13	q5	ENSP00000006015	ENSP00000006015	HOXA11	q5	344.19	16	15975493	15977085	-1	2	87.2%	67%	813	0.25 / 0.08 = 3.13	ortholog_one2many:ENSDARG00000007009_(ENSDARP00000005174 [hoxa11b])	1
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p14	q6	ENSP00000222753	ENSP00000222753	HOXA13	q6	249.84	16	15984766	15985716	-1	2	50.3%	66.5%	579	0.58 / 0.58 = 1	ortholog_one2many:ENSDARG00000036254_(ENSDARP00000052661 [hoxa13b])	3
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p15	---	ENSP00000222761	ENSP00000222761	EVX1	noMatch
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p16	---	ENSP00000322111	ENSP00000322111	A4D198_HUMAN	noMatch
3	4073	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	16	p17	q7	ENSP00000265395	ENSP00000265395	HIBADH	q7	507.48	16	15993005	16007851	-1	7	90.5%	82%	933	0.86 / 0.22 = 3.91	ortholog_one2many:ENSDARG00000007959_(ENSDARP00000003030 [hibadh])	1
#
##################################################################
#
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p1	---	ENSP00000005587	ENSP00000005587	SKAP2	noMatch
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p2	---	ENSP00000328286	ENSP00000328286	-	noMatch
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p3	q1	ENSP00000343246	ENSP00000343246	HOXA1	q3	102.22	23	33830835	33831080	1	1	24.8%	71.1%	246	0.69 / 0.83 = 0.83	NOMATCH:ENSDARG00000070337(ENSDARP00000093905 [hoxc1a]);	5
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p4	---	ENSP00000222718	ENSP00000222718	HOXA2	noMatch
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p5	q2	ENSP00000324884	ENSP00000324884	HOXA3	q2	101.16	23	33795334	33795546	1	1	16%	74.6%	213	0.26 / 0.8 = 0.33	NOMATCH:ENSDARG00000070339(ENSDARP00000076907 [hoxc3a],ENSDARP00000076908 [hoxc3a]);	10
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p6	---	ENSP00000297027	ENSP00000297027	Q96MZ3_HUMAN	noMatch
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p7	q3	ENSP00000353151	ENSP00000353151	HOXA4	q3	190.35	23	33778862	33779867	1	2	55%	61.6%	483	0.59 / 0.69 = 0.86	between_species_paralog:ENSDARG00000070338_(ENSDARP00000093906 [hoxc4a])	3
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p8	---	ENSP00000222726	ENSP00000222726	HOXA5	q4
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p9	q4	ENSP00000222728	ENSP00000222728	HOXA6	q4	206.67	23	33763064	33767828	1	3	92.7%	49.4%	654	0.48 / 0.55 = 0.87	NOMATCH:ENSDARG00000070343(ENSDARP00000093910 [hoxc6a]);ENSDARG00000070340(ENSDARP00000093908 [hoxc5a]);	3
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p10	q5	ENSP00000242159	ENSP00000242159	HOXA7	q5	151.27	23	33749042	33751044	1	2	80%	50.8%	534	0.47 / 0.65 = 0.72	NOMATCH:ENSDARG00000070346(ENSDARP00000093913 [hoxc8a]);	2
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p11	q6	ENSP00000343619	ENSP00000343619	HOXA9	q6	238.58	23	33742961	33744781	1	2	98.5%	49.6%	765	0.55 / 0.54 = 1.02	NOMATCH:ENSDARG00000070348(ENSDARP00000093914 [hoxc9a]);	2
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p12	q7	ENSP00000283921	ENSP00000283921	HOXA10	q7	182.6	23	33731209	33733955	1	2	64.9%	46.4%	729	0.65 / 0.72 = 0.9	NOMATCH:ENSDARG00000070350(ENSDARP00000053294 [hoxc10a]);	3
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p13	q8	ENSP00000006015	ENSP00000006015	HOXA11	q8	285.05	23	33722561	33724786	1	2	93.3%	55.5%	852	0.25 / 0.24 = 1.04	NOMATCH:ENSDARG00000070351(ENSDARP00000093920 [hoxc11a]);	3
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p14	q9	ENSP00000222753	ENSP00000222753	HOXA13	q9	242.45	23	33701748	33704206	1	2	62.1%	58.8%	678	0.58 / 0.6 = 0.97	NOMATCH:ENSDARG00000070353(ENSDARP00000093923 [hoxc13a],ENSDARP00000093922);	4
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p15	---	ENSP00000222761	ENSP00000222761	EVX1	noMatch
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p16	---	ENSP00000322111	ENSP00000322111	A4D198_HUMAN	noMatch
4	3322	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p17	---	ENSP00000265395	ENSP00000265395	HIBADH	noMatch
#
##################################################################
#
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p1	---	ENSP00000005587	ENSP00000005587	SKAP2	noMatch
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p2	---	ENSP00000328286	ENSP00000328286	-	noMatch
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p3	q2	ENSP00000343246	ENSP00000343246	HOXA1	q4	102.22	23	35159197	35159442	-1	1	24.8%	71.1%	246	0.69 / 0.83 = 0.83	NOMATCH:ENSDARG00000070309(ENSDARP00000093824 [hoxc1a]);	5
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p4	---	ENSP00000222718	ENSP00000222718	HOXA2	noMatch
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p5	q3	ENSP00000324884	ENSP00000324884	HOXA3	q5	101.16	23	35194845	35195057	-1	1	16%	74.6%	213	0.26 / 0.8 = 0.33	NOMATCH:ENSDARG00000055117(ENSDARP00000071900 [hoxc3a],ENSDARP00000093816 [hoxc3a]);	10
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p6	---	ENSP00000297027	ENSP00000297027	Q96MZ3_HUMAN	noMatch
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p7	q4	ENSP00000353151	ENSP00000353151	HOXA4	q4	190.35	23	35210616	35211621	-1	2	55%	61.6%	483	0.59 / 0.69 = 0.86	between_species_paralog:ENSDARG00000070308_(ENSDARP00000085719 [hoxc4a])	3
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p8	---	ENSP00000222726	ENSP00000222726	HOXA5	q5
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p9	q5	ENSP00000222728	ENSP00000222728	HOXA6	q5	206.67	23	35222647	35227411	-1	3	92.7%	49.4%	654	0.48 / 0.55 = 0.87	NOMATCH:ENSDARG00000070307(ENSDARP00000093812 [hoxc5a]);ENSDARG00000070305(ENSDARP00000093809 [hoxc6a]);	3
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p10	q6	ENSP00000242159	ENSP00000242159	HOXA7	q6	151.27	23	35239388	35241390	-1	2	80%	50.8%	534	0.47 / 0.65 = 0.72	NOMATCH:ENSDARG00000070302(ENSDARP00000093804 [hoxc8a]);	2
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p11	q7	ENSP00000343619	ENSP00000343619	HOXA9	q7	238.58	23	35245651	35247471	-1	2	98.5%	49.6%	765	0.55 / 0.54 = 1.02	NOMATCH:ENSDARG00000070300(ENSDARP00000093802 [hoxc9a]);	2
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p12	q8	ENSP00000283921	ENSP00000283921	HOXA10	q8	182.6	23	35256479	35259225	-1	2	64.9%	46.4%	729	0.65 / 0.72 = 0.9	NOMATCH:ENSDARG00000070298(ENSDARP00000093800 [hoxc10a]);	3
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p13	q9	ENSP00000006015	ENSP00000006015	HOXA11	q9	285.05	23	35265648	35267873	-1	2	93.3%	55.5%	852	0.25 / 0.24 = 1.04	NOMATCH:ENSDARG00000070295(ENSDARP00000093797 [hoxc11a]);	3
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p14	q10	ENSP00000222753	ENSP00000222753	HOXA13	q10	242.45	23	35287160	35289618	-1	2	62.1%	58.8%	678	0.58 / 0.6 = 0.97	NOMATCH:ENSDARG00000070288(ENSDARP00000093788 [hoxc13a],ENSDARP00000093786);	4
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p15	---	ENSP00000222761	ENSP00000222761	EVX1	noMatch
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p16	---	ENSP00000322111	ENSP00000322111	A4D198_HUMAN	noMatch
5	3318	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p17	---	ENSP00000265395	ENSP00000265395	HIBADH	noMatch
#
##################################################################
#
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p1	---	ENSP00000005587	ENSP00000005587	SKAP2	noMatch
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p2	---	ENSP00000328286	ENSP00000328286	-	noMatch
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p3	---	ENSP00000343246	ENSP00000343246	HOXA1	noMatch
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p4	---	ENSP00000222718	ENSP00000222718	HOXA2	q1
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p5	q1	ENSP00000324884	ENSP00000324884	HOXA3	q1	305.81	9	1922029	1923358	-1	2	84.4%	49.3%	1047	0.26 / 0.41 = 0.63	between_species_paralog:ENSDARG00000059280_(ENSDARP00000076793)	3
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p6	---	ENSP00000297027	ENSP00000297027	Q96MZ3_HUMAN	noMatch
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p7	q2	ENSP00000353151	ENSP00000353151	HOXA4	q2	189.64	9	1933897	1934984	-1	2	45.9%	67.8%	429	0.59 / 0.69 = 0.86	between_species_paralog:ENSDARG00000059276_(ENSDARP00000076791 [hoxd4a])	4
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p8	---	ENSP00000222726	ENSP00000222726	HOXA5	q2
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p9	---	ENSP00000222728	ENSP00000222728	HOXA6	q2
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p10	---	ENSP00000242159	ENSP00000242159	HOXA7	q2
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p11	q3	ENSP00000343619	ENSP00000343619	HOXA9	q3	239.99	9	1948806	1949904	-1	2	99.6%	48%	855	0.55 / 0.54 = 1.02	NOMATCH:ENSDARG00000059274(ENSDARP00000076790 [hoxd9a]);	1
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p12	q4	ENSP00000283921	ENSP00000283921	HOXA10	q4	208.66	9	1952491	1953931	-1	2	42%	68.7%	480	0.65 / 0.68 = 0.96	NOMATCH:ENSDARG00000057859(ENSDARP00000075055 [hoxd10a]);	2
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p13	q5	ENSP00000006015	ENSP00000006015	HOXA11	q5	284.69	9	1960574	1962255	-1	2	91.1%	56.1%	825	0.25 / 0.24 = 1.04	NOMATCH:ENSDARG00000059267(ENSDARP00000076780,ENSDARP00000093699,ENSDARP00000075052 [hoxd11a]);	4
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p14	q6	ENSP00000222753	ENSP00000222753	HOXA13	q6	161.13	9	1971944	1974397	-1	2	57.7%	46.5%	651	0.58 / 0.73 = 0.79	NOMATCH:ENSDARG00000059256(ENSDARP00000076768 [hoxd13a]);	6
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p15	q7	ENSP00000222761	ENSP00000222761	EVX1	q7	358.87	9	1987346	1989676	1	4	74.2%	63.1%	918	0.42 / 0.39 = 1.08	between_species_paralog:ENSDARG00000059255_(ENSDARP00000076765 [evx2])	2
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p16	---	ENSP00000322111	ENSP00000322111	A4D198_HUMAN	noMatch
6	3269	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	9	p17	---	ENSP00000265395	ENSP00000265395	HIBADH	noMatch
#
##################################################################
#
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p1	q1	ENSP00000005587	ENSP00000005587	SKAP2	q1	327.37	12	26394051	26440888	-1	8	77.7%	49.8%	945	0.59 / 0.56 = 1.05	between_species_paralog:ENSDARG00000001498_(ENSDARP00000096432 [zgc:158223])	2
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p2	---	ENSP00000328286	ENSP00000328286	-	noMatch
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p3	q2	ENSP00000343246	ENSP00000343246	HOXA1	q2	183.66	12	26456223	26457244	-1	2	97.9%	39.8%	939	0.69 / 0.7 = 0.99	NOMATCH:ENSDARG00000054033(ENSDARP00000070641 [hoxb1b]);	3
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p4	---	ENSP00000222718	ENSP00000222718	HOXA2	noMatch
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p5	---	ENSP00000324884	ENSP00000324884	HOXA3	q3
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p6	---	ENSP00000297027	ENSP00000297027	Q96MZ3_HUMAN	noMatch
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p7	---	ENSP00000353151	ENSP00000353151	HOXA4	q3
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p8	q3	ENSP00000222726	ENSP00000222726	HOXA5	q3	285.4	12	26467712	26468987	-1	2	98.1%	57.7%	816	0.41 / 0.44 = 0.93	between_species_paralog:ENSDARG00000054030_(ENSDARP00000070639 [hoxb5b])	3
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p9	q4	ENSP00000222728	ENSP00000222728	HOXA6	q4	232.94	12	26470452	26471559	-1	2	99.6%	58.1%	675	0.48 / 0.49 = 0.98	ortholog_one2one:ENSDARG00000026513_(ENSDARP00000010277 [hoxb6b])	2
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p10	q5	ENSP00000242159	ENSP00000242159	HOXA7	q5	149.51	12	26478803	26480924	-1	2	85.7%	46.8%	642	0.47 / 0.66 = 0.71	NOMATCH:ENSDARG00000054025(ENSDARP00000070632 [hoxb8b]);	3
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p11	---	ENSP00000343619	ENSP00000343619	HOXA9	noMatch
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p12	---	ENSP00000283921	ENSP00000283921	HOXA10	noMatch
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p13	---	ENSP00000006015	ENSP00000006015	HOXA11	noMatch
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p14	---	ENSP00000222753	ENSP00000222753	HOXA13	noMatch
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p15	---	ENSP00000222761	ENSP00000222761	EVX1	noMatch
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p16	---	ENSP00000322111	ENSP00000322111	A4D198_HUMAN	noMatch
7	2119	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	12	p17	---	ENSP00000265395	ENSP00000265395	HIBADH	noMatch
#
##################################################################
#
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p1	---	ENSP00000005587	ENSP00000005587	SKAP2	noMatch
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p2	---	ENSP00000328286	ENSP00000328286	-	noMatch
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p3	---	ENSP00000343246	ENSP00000343246	HOXA1	noMatch
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p4	---	ENSP00000222718	ENSP00000222718	HOXA2	noMatch
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p5	---	ENSP00000324884	ENSP00000324884	HOXA3	noMatch
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p6	---	ENSP00000297027	ENSP00000297027	Q96MZ3_HUMAN	noMatch
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p7	---	ENSP00000353151	ENSP00000353151	HOXA4	q1
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p8	---	ENSP00000222726	ENSP00000222726	HOXA5	q1
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p9	q1	ENSP00000222728	ENSP00000222728	HOXA6	q1	194.92	11	589745	590834	1	2	100%	47%	684	0.48 / 0.57 = 0.84	NOMATCH:ENSDARG00000046045(ENSDARP00000067697 [hoxc6b]);	4
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p10	---	ENSP00000242159	ENSP00000242159	HOXA7	q1
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p11	---	ENSP00000343619	ENSP00000343619	HOXA9	noMatch
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p12	---	ENSP00000283921	ENSP00000283921	HOXA10	q2
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p13	q2	ENSP00000006015	ENSP00000006015	HOXA11	q2	260.75	11	566842	568428	1	2	93.3%	51.2%	852	0.25 / 0.3 = 0.83	NOMATCH:ENSDARG00000059401(ENSDARP00000076949 [hoxc11b],ENSDARP00000067694 [hoxc11b]);	5
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p14	q3	ENSP00000222753	ENSP00000222753	HOXA13	q3	232.94	11	547516	549822	1	2	58.5%	59.1%	642	0.58 / 0.61 = 0.95	NOMATCH:ENSDARG00000043871(ENSDARP00000064412 [hoxc13b]);	5
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p15	---	ENSP00000222761	ENSP00000222761	EVX1	noMatch
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p16	---	ENSP00000322111	ENSP00000322111	A4D198_HUMAN	noMatch
8	1490	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	11	p17	---	ENSP00000265395	ENSP00000265395	HIBADH	noMatch
#
##################################################################
#
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p1	---	ENSP00000005587	ENSP00000005587	SKAP2	noMatch
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p2	q1	ENSP00000328286	ENSP00000328286	-	q1	201.04	23	42161159	42162169	1	3	75.8%	58.1%	480	0.19 / 0.4 = 0.48	between_species_paralog:ENSDARG00000053990_(ENSDARP00000058363)	3
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p3	---	ENSP00000343246	ENSP00000343246	HOXA1	noMatch
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p4	---	ENSP00000222718	ENSP00000222718	HOXA2	noMatch
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p5	---	ENSP00000324884	ENSP00000324884	HOXA3	noMatch
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p6	---	ENSP00000297027	ENSP00000297027	Q96MZ3_HUMAN	noMatch
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p7	---	ENSP00000353151	ENSP00000353151	HOXA4	noMatch
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p8	---	ENSP00000222726	ENSP00000222726	HOXA5	noMatch
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p9	---	ENSP00000222728	ENSP00000222728	HOXA6	noMatch
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p10	---	ENSP00000242159	ENSP00000242159	HOXA7	noMatch
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p11	---	ENSP00000343619	ENSP00000343619	HOXA9	noMatch
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p12	---	ENSP00000283921	ENSP00000283921	HOXA10	noMatch
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p13	---	ENSP00000006015	ENSP00000006015	HOXA11	noMatch
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p14	---	ENSP00000222753	ENSP00000222753	HOXA13	noMatch
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p15	---	ENSP00000222761	ENSP00000222761	EVX1	noMatch
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p16	---	ENSP00000322111	ENSP00000322111	A4D198_HUMAN	noMatch
9	596	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	23	p17	---	ENSP00000265395	ENSP00000265395	HIBADH	noMatch
#
##################################################################
#
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p1	---	ENSP00000005587	ENSP00000005587	SKAP2	noMatch
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p2	---	ENSP00000328286	ENSP00000328286	-	noMatch
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p3	---	ENSP00000343246	ENSP00000343246	HOXA1	noMatch
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p4	---	ENSP00000222718	ENSP00000222718	HOXA2	noMatch
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p5	q1	ENSP00000324884	ENSP00000324884	HOXA3	q1	107.28	24	20272372	20274036	1	2	16%	70.4%	213	0.26 / 0.79 = 0.33	NOMATCH:ENSDARG00000002779(ENSDARP00000017531 [pdx1]);	9
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p6	---	ENSP00000297027	ENSP00000297027	Q96MZ3_HUMAN	noMatch
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p7	---	ENSP00000353151	ENSP00000353151	HOXA4	noMatch
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p8	---	ENSP00000222726	ENSP00000222726	HOXA5	noMatch
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p9	---	ENSP00000222728	ENSP00000222728	HOXA6	noMatch
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p10	---	ENSP00000242159	ENSP00000242159	HOXA7	noMatch
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p11	---	ENSP00000343619	ENSP00000343619	HOXA9	noMatch
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p12	---	ENSP00000283921	ENSP00000283921	HOXA10	noMatch
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p13	---	ENSP00000006015	ENSP00000006015	HOXA11	noMatch
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p14	---	ENSP00000222753	ENSP00000222753	HOXA13	noMatch
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p15	---	ENSP00000222761	ENSP00000222761	EVX1	noMatch
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p16	---	ENSP00000322111	ENSP00000322111	A4D198_HUMAN	noMatch
10	204	HOXA9_ENSG00000078399_5e5.protein.info	Danio_rerio	24	p17	---	ENSP00000265395	ENSP00000265395	HIBADH	noMatch
#
##################################################################
#