Diploma Thesis - Supplementary Material
Programs:
- repAlign
- extractSeq
- splitAlign - This is an outdated version. It was re-implemented as the thesis was written. To be able to reproduce the results described in the thesis this old version is provided. If you want to make use of its functionality otherwise, please contact Dominic Rose for the new version written in Perl.
Data:
-
predicted miRNAs - The predicted homologs of mir-1264 in mouse and rat are included in the respective files and commented after the header (fasta standard, separated by a whitespace). All miRNAs annotated in miRBase are not included. header format:
organism_acronym:repeat:repeat_family:repeat_class:location:strand:start:end