Sequence ID | X_DroMel_CAF1 |
---|---|
Location | 1,498,841 – 1,498,933 |
Length | 92 |
Max. P | 0.717062 |
Location | 1,498,841 – 1,498,933 |
---|---|
Length | 92 |
Sequences | 3 |
Columns | 92 |
Reading direction | reverse |
Mean pairwise identity | 100.00 |
Mean single sequence MFE | -18.00 |
Consensus MFE | -18.00 |
Energy contribution | -18.00 |
Covariance contribution | 0.00 |
Combinations/Pair | 1.00 |
Mean z-score | -1.58 |
Structure conservation index | 1.00 |
SVM decision value | 0.39 |
SVM RNA-class probability | 0.717062 |
Prediction | RNA |
Download alignment: ClustalW | MAF
>X_DroMel_CAF1 1498841 92 - 22224390 CAUUGGUUUCGAUUUGGAUUUUGAAAUUUUGGAAUUUUUUCAGAAUUUUUGAUUUAAUUUCAGUUGAUUUCAUGUGUGCAUUGCCGGAUGGU (((((((.......((.((..(((((((((((((((...(((((...)))))...))))))))..)))))))...)).))..))).)))).. ( -18.00) >DroSec_CAF1 23630 92 - 1 CAUUGGUUUCGAUUUGGAUUUUGAAAUUUUGGAAUUUUUUCAGAAUUUUUGAUUUAAUUUCAGUUGAUUUCAUGUGUGCAUUGCCGGAUGGU (((((((.......((.((..(((((((((((((((...(((((...)))))...))))))))..)))))))...)).))..))).)))).. ( -18.00) >DroSim_CAF1 8132 92 - 1 CAUUGGUUUCGAUUUGGAUUUUGAAAUUUUGGAAUUUUUUCAGAAUUUUUGAUUUAAUUUCAGUUGAUUUCAUGUGUGCAUUGCCGGAUGGU (((((((.......((.((..(((((((((((((((...(((((...)))))...))))))))..)))))))...)).))..))).)))).. ( -18.00) >consensus CAUUGGUUUCGAUUUGGAUUUUGAAAUUUUGGAAUUUUUUCAGAAUUUUUGAUUUAAUUUCAGUUGAUUUCAUGUGUGCAUUGCCGGAUGGU (((((((.......((.((..(((((((((((((((...(((((...)))))...))))))))..)))))))...)).))..))).)))).. (-18.00 = -18.00 + 0.00)
Generated by rnazCluster.pl (part of RNAz 1.0) on Mon Dec 4 09:46:30 2006