Publications - Published papers

Please find below publications of our group. Currently, we list 272 papers. Some of the publications are in collaboration with the group of Sonja Prohaska and are also listed in the publication list for her individual group. Access to published papers (access) is restricted to our local network and chosen collaborators. If you have problems accessing electronic information, please let us know:

©NOTICE: All papers are copyrighted by the authors; If you would like to use all or a portion of any paper, please contact the author.

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Publications of the bioinformatics group 2012

Orthology Relations, Symbolic Ultrametrics, and Cographs

Marc Hellmuth, Maribel Hernandez-Rosales, Katharina T. Huber, Vincent Moulton, Peter F. Stadler, Nicolas Wieseke
J.Math.Biol DOI: 10.1007/s00285-012-0525-x
PREPRINT 11-026: [ Abstract ]  [ PDF ]
[ Publishers's page ]

Evolution of the let-7 microRNA Family

Jana Hertel, Sebastian Bartschat, Axel Wintsche, Christian Otto, The Students of the Bioinformatics Computer Lab 2011, Peter F Stadler
RNA Biology 9: 231-241 (2012)
PREPRINT 11-022: [ Abstract ]  [ Supplement ]
[ Publishers's page ]  paperID

Hidden treasures in unspliced EST data

Jan Engelhardt, Peter F. Stadler
Th. Biosci. 131: 49-57 (2012)
PREPRINT 11-020: [ Abstract ]  [ PDF ]
[ Publishers's page ]  paperID

A measure of individual role in collective dynamics

Konstantin Klemm, M. Angeles Serrano, Victor M. Eguiluz, Maxi San Miguel
Scientific Reports 2:292 (2012)
PREPRINT 11-006: [ Abstract ]  [ PDF ]
[ Publishers's page ]  paperID

Landscape Encodings Enhance Optimization

Konstantin Klemm, Anita Mehta, Peter F. Stadler
PLoS One 7: e34780 (2012)
PREPRINT 11-005: [ Abstract ]  [ PDF ]
[ Publishers's page ]  paperID

Symmetric Circular Matchings and RNA Folding

Ivo L. Hofacker, Christian M. Reidys, and Peter F. Stadler
Discrete Mathematics 312:100–112 (2012)
PREPRINT 10-025:   paperID

The Cartesian Product of Hypergraphs

Lydia Gringmann, Marc Hellmuth, Peter F. Stadler
J. Graph Theory 70: 180-196 (2012)
PREPRINT 10-012: [ Abstract ]  [ PDF ]
[ Publishers's page ]  paperID

Diagonalized Cartesian Products of S-prime graphs are S-prime

Marc Hellmuth, Lydia Gringmann, Peter F. Stadler
Discrete Mathematics 312:74–80 (2012)
PREPRINT 09-035: [ Abstract ]  [ PDF ]   paperID