Publications - Supplemental material
Please find below supplemental material corresponding to publications of our group. Currently, we list 132 supplements.
If you have problems accessing electronic information, please let us know:
You may use this URL to cite or link to us.
©NOTICE: All documents are copyrighted by the authors; If you would like to use all or a portion of any paper, please contact the author.
This supplement is also available at http://www.bioinf.uni-leipzig.de/publications/supplements/07-007You may use this URL to cite or link to us.
BIOINF 07-007: <tt>NcDNAlign</tt>: Plausible Multiple Alignments of Non-Protein-Coding Genomic Sequences
Dominic Rose, Jana Hertel, Kristin Reiche, Jörg Hackermüller, Peter F. Stadler
Further supplementary tables and figures: PDF
Example application 1: Ultra-conserved regions (UCRs) in nematodes
We identified 530 UCRs and 4,479 CNEs, all coordinates resp. sequences refer to Caenorhabditis elegans.Example application 2: Ultra-conserved regions (UCRs) in teleosts
We identified 2,377 UCRs, all coordinates resp. sequences refer to Takifugu rubripes.Example application 3: Prediction of novel structured non-coding RNAs in gammaproteobacterial genomes
- Browsing RNAz predictions of gammaproteobacteria
- FASTA sequence file
- BED coordinate file
Further supplementary tables and figures: PDF
Download NcDNAlign: http://www.bioinf.uni-leipzig.de/Software/NcDNAlign