Publications - Published papers

Please find below publications of our group. Currently, we list 496 papers. Some of the publications are in collaboration with the group of Sonja Prohaska and are also listed in the publication list for her individual group. Access to published papers (access) is restricted to our local network and chosen collaborators. If you have problems accessing electronic information, please let us know:

©NOTICE: All papers are copyrighted by the authors; If you would like to use all or a portion of any paper, please contact the author.

Evolution of the Long Non-coding RNAs MALAT1 and MENβ/ε

Peter F. Stadler

Download


PREPRINT 10-011: [ PDF ]
[ Publishers's page ]  paperID

Status:


In: <em>Advances in Bioinformatics and Computational Biology</em>,<br> Carlos E. Ferreira, Satoru Miyano, Peter F. Stadler (eds.), <br>Springer, Heidelberg, Lect. Notes Comp. Sci. 6268 (2010), pp.1-12<br>

Abstract


MALAT1 is one of the best-conserved long ncRNAs in mammals and shares several characteristics, among them nuclear retention and a non-standard processing of its 3&#039; end, with the longer, but less well conserved, adjacent MEN-beta RNA. We show that MALAT1 is conserved among gnathostomes (with the possible exception of birds), while MEN-beta likely originated in the mammalian stem lineage. Evolutionary conserved features of both transcripts are discussed, including RNA secondary structure motifs and short RNA processing products.

Keywords


MALAT1, MEN$\beta$, VINC, NEAT1, TncRNA