Proteinortho - Orthology detection tool


View Proteinortho5 / PoFF manual


2014-07-01: Proteinortho V5.07 - Source code 2014-04-01: Proteinortho V5.06 - Source code 2014-03-05: Proteinortho V5.05 - Source code 2014-02-12: Proteinortho V5.04 - Source code 2014-01-31: Proteinortho V5.03 - Source code (BETA) 2014-01-27: Proteinortho V5.02 - Source code 2013-12-17: Proteinortho V5.0 - Source code 2012-06-05: Proteinortho V4.26 - Source code 2012-05-01: Proteinortho V4.25 - Source code 2011-08-16: Proteinortho V4.22 - Source code 2011-01-12: Proteinortho V4.20 - Source code 2010-12-17: Proteinortho V4.18 - Source code


Proteinortho predicts (co-)orthologous proteins within different species.
The program was optimized for multi-core processors and low memory usage. If necessary, Proteinortho allows to handle large sets with millions of proteins. Several options for distributed computing on managed and unmanaged clusters are available.


Lechner et al (2011). Proteinortho: Detection of (Co-)Orthologs in Large-Scale Analysis. BMC Bioinformatics 2011 Apr 28;12(1):124.


Proteinortho4 - Orthology detection tool
Po2Tree - Protein inclusion tree