Proteinortho - Orthology detection tool

Manual

View Proteinortho5 / PoFF manual

Downloads

2014-07-01: Proteinortho V5.07 - Source code 2014-04-01: Proteinortho V5.06 - Source code 2014-03-05: Proteinortho V5.05 - Source code 2014-02-12: Proteinortho V5.04 - Source code 2014-01-31: Proteinortho V5.03 - Source code (BETA) 2014-01-27: Proteinortho V5.02 - Source code 2013-12-17: Proteinortho V5.0 - Source code 2012-06-05: Proteinortho V4.26 - Source code 2012-05-01: Proteinortho V4.25 - Source code 2011-08-16: Proteinortho V4.22 - Source code 2011-01-12: Proteinortho V4.20 - Source code 2010-12-17: Proteinortho V4.18 - Source code

Description

Proteinortho predicts (co-)orthologous proteins within different species.
The program was optimized for multi-core processors and low memory usage. If necessary, Proteinortho allows to handle large sets with millions of proteins. Several options for distributed computing on managed and unmanaged clusters are available.

Citation

Lechner et al (2011). Proteinortho: Detection of (Co-)Orthologs in Large-Scale Analysis. BMC Bioinformatics 2011 Apr 28;12(1):124.

Manuals

Proteinortho4 - Orthology detection tool
Po2Tree - Protein inclusion tree