DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1500
Protein: lcl|KC353356.1_cdsid_AGH24256.1 [gene=rpl11] [protein=ribosomal protein L11] [protein_id=AGH24256.1] [location=4796..5236] @ 0
DNA length: 876 Protein length: 146
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
1501 TATATGAAGCTGGTTCAATATGTAAATCTTTATATAAAATA-ATGCCGACAACTAAATATTCGGTAGTTAAAGATATTATTTTGGTGAAA 1589
1 M S K I L G F I R I E I E S G K A N P S P P V G P A L G L R 30
1590 ---TATAGT---TTAGATACTTCAGCTGATTATCAACCTTCTCAAGATGAAGCCTCATATTTCCCTTCTGATGATATTAATGATATGATA 1673
31 G V N I M Q F C K D F N N R C K Q L G L K E G T P V P T I I 60
1674 CCAGTA---CAAATGCAAGATATACCTGTTAAATCCAAAGAGCCTAAAATAGAATATCCTAGAAGACCTAATATTGATCTTAAACGTGAA 1760
61 T V Y D D K T Y S F K M K T P S L T Y F I K K N L D L K K G 90
1761 ACAATTATCCCTAGATTTGAAATTGAAACTGAAACAATACCACCTACAATAGTAAATCCACCGGATGTTATTAATAATGATTTACCTTTT 1850
91 A S K P G K E T V L T M D I R S I Y E I A D I K K A D S G L 120
1851 GAA---GAACCTGTTGAGGAGCCTATTGAAATAAAAGTAGAATTTTTTAATGCTTATACG---GATCTTATGAATATA 1922
121 D I K S V C K S L V G T V K S M G I K T I N P K K I 146
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2641
Protein: lcl|KC353356.1_cdsid_AGH24256.1 [gene=rpl11] [protein=ribosomal protein L11] [protein_id=AGH24256.1] [location=4796..5236] @ 0
DNA length: 876 Protein length: 146
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.08
2642 GAAAAAAAAATAATAGAAAAACTT---ATAGAAGCTGATACTATAGCGGAAAAAATACAAGGTAATTCTCATATTTTTAATCCATTAAGA 2728
1 M S K I L G F I R I E I E S G K A N P S P P V G P A L G L R 30
2729 TTAGTTTATAACACCAGT---AGTAAAGTATGGAATTACCTAAAAAAAAATGTTGAATTTAAATTCCATAAACCTGAGTCTGATAATTAT 2815
31 G V N I M Q F C K D F N N R C K Q L G L K E G T P V P T I I 60
2816 ACAGTGCCTATTACAGCCGTTTATGATACAAAACAAGGATCATCCGATATTCAATATAATTTAGAAAAAATAATTAAAGATTTGAAAATA 2905
61 T V Y D D K T Y S F K M K T P S L T Y F I K K N L D L K K G 90
2906 GCTATACAGGAA---AAA---TCTTTGAATAAAGAACAAGTAAAAAGCATTATTGATGATATTCGTAAAAATTATGTTACTAAAGGGGTT 2989
91 A S K P G K E T V L T M D I R S I Y E I A D I K K A D S G L 120
2990 AGTATAGAGAATGCTAATGAA---CTTTTAACTCTTTGGAAGTCTTATGATTTTCAATATGAACCTTTAAAACAAATT 3064
121 D I K S V C K S L V G T V K S M G I K T I N P K K I 146
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2641
Protein: lcl|KC353356.1_cdsid_AGH24256.1 [gene=rpl11] [protein=ribosomal protein L11] [protein_id=AGH24256.1] [location=4796..5236] @ 0
DNA length: 876 Protein length: 146
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.08
2642 GAAAAAAAAATAATAGAAAAACTT---ATAGAAGCTGATACTATAGCGGAAAAAATACAAGGTAATTCTCATATTTTTAATCCATTAAGA 2728
1 M S K I L G F I R I E I E S G K A N P S P P V G P A L G L R 30
2729 TTAGTTTATAACACCAGT---AGTAAAGTATGGAATTACCTAAAAAAAAATGTTGAATTTAAATTCCATAAACCTGAGTCTGATAATTAT 2815
31 G V N I M Q F C K D F N N R C K Q L G L K E G T P V P T I I 60
2816 ACAGTGCCTATTACAGCCGTTTATGATACAAAACAAGGATCATCCGATATTCAATATAATTTAGAAAAAATAATTAAAGATTTGAAAATA 2905
61 T V Y D D K T Y S F K M K T P S L T Y F I K K N L D L K K G 90
2906 GCTATACAGGAA---AAA---TCTTTGAATAAAGAACAAGTAAAAAGCATTATTGATGATATTCGTAAAAATTATGTTACTAAAGGGGTT 2989
91 A S K P G K E T V L T M D I R S I Y E I A D I K K A D S G L 120
2990 AGTATAGAGAATGCTAATGAA---CTTTTAACTCTTTGGAAGTCTTATGATTTTCAATATGAACCTTTAAAACAAATT 3064
121 D I K S V C K S L V G T V K S M G I K T I N P K K I 146
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3166
Protein: lcl|KC353356.1_cdsid_AGH24256.1 [gene=rpl11] [protein=ribosomal protein L11] [protein_id=AGH24256.1] [location=4796..5236] @ 0
DNA length: 876 Protein length: 146
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
3167 ATGTCAATAGCTCTTAAAAATATAAATAATTTTCTTGAAAAAAATAAAGATTATACTAAAGAATTTCTTGAAGCAAAAGAATTACAAGAA 3256
1 M S K I L G F I R I E I E S G K A N P S P P V G P A L G L R 30
3257 TGGTATGATTATTTTCAGAATAGAGGAGCATTAAAAAAATTATCAAAACAAGAAAAA---GAAGTTTATGATAAATTATTAGAAATAAAA 3343
31 G V N I M Q F C K D F N N R C K Q L G L K E G T P V P T I I 60
3344 AATAAATATTTACCTAGCGAAAAAGATTTTCAAGAAAAAAATAGTAGTTATTTGACACCTCTGAAAAAAAATAGTGCTTTACCTATTAAT 3433
61 T V Y D D K T Y S F K M K T P S L T Y F I K K N L D L K K G 90
3434 TTACAAAATGAA---AAATCAGCTAAATGTTACTTGCCAAAAGATTATGTTATGGAAATAACAAATATAGAACGTGCTCTTGAAATTTTA 3520
91 A S K P G K E T V L T M D I R S I Y E I A D I K K A D S G L 120
3521 AAT---AAATCACAAACATTATCT---ATTAATGATCTTAAATTGTTATCCATTAATTCT---TCGGCAGTTACTATA 3589
121 D I K S V C K S L V G T V K S M G I K T I N P K K I 146
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6438
Protein: lcl|KC353356.1_cdsid_AGH24256.1 [gene=rpl11] [protein=ribosomal protein L11] [protein_id=AGH24256.1] [location=4796..5236] @ 0
DNA length: 876 Protein length: 146
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.01
6439 TTTCTGTATCTTTGTAAGCCGATAGTCATTCAAATA---TCTAAGCGTTTTTATCCCACTGATAAAAAAATAGGTCATGCTAAAAAATTG 6525
1 M S K I L G F I R I E I E S G K A N P S - P P V G P A L G L 29
6526 CTTGATCACCGTTCAATGTCTTTTTCTAAAAGAATTTCGAATCCACAATGTCGTAAATTGCGTCAACAATGTAAACAGCATCATAATAAA 6615
30 R G V N I M Q F C K D F N N - R C K Q L G L K E G T P V P T 58
6616 TATATTACT------GATACAAAAATACAAACT---AGACATAGAGGTTTAAGC---AATAGAGAATTACAA---GGTATTCGA---TCT 6687
59 I I T V Y D D K T Y S F K M K T P S L T Y F I K K N L D L K 88
6688 CCATTGAGTAGTAAAAAGTTTAAGGAG---GTAAATAATATTGATATGAAAAATCCTTTTCAAAACTCACAA---AAAGTGTCAGAACCT 6771
89 K G A S K P G K E T V L T M D I R S I Y E I A D I K K A D S 118
6772 TTTTCACCTCTTACAAGTATAACTAAAACCTGTAAAACAACATTTAAATCCTTT---ATTAAAAAA---GATTCATTATCAATT 6849
119 G L D I K S V C K S L V G T V K S M G I K T I N P K K I 146
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6990
Protein: lcl|KC353356.1_cdsid_AGH24256.1 [gene=rpl11] [protein=ribosomal protein L11] [protein_id=AGH24256.1] [location=4796..5236] @ 0
DNA length: 876 Protein length: 146
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
6991 ACTACTGTTTTAAATGATTTCTCTAAAATAGATAATACTTCTTCAAGCGTAAAACCAATTCCTGAATTAAAAAATCCAGACGGTGTTATA 7080
1 M S K I L G F I R I E I E S G K A N P S P P V G P A L G L R 30
7081 TATACTACTAATATTACTGAAAAAACAAGTATGGAAGAATTAACCAAGCAGCAACTTATTGATGAA---TTAAAAAAACGTAACTTGATA 7167
31 G V N I M Q F C K D F N N R C K Q L G L K E G T P V P T I I 60
7168 AAAATA---ACA---AAATCTCCTGCAGTTATTATTGAAACAGAAAGTGATGGTCATATACGTATTGGTAATAAAGATAATGATTTAATA 7251
61 T V Y D D K T Y S F K M K T P S L T Y F I K K N L D L K K G 90
7252 TTTACGAAACACGGGCGAGCGTATTTAGAATTACAGCCAAAAAGTCAAATTTTTATAAATCCTTTAGAAATCACCAAAGAAAATATTACT 7341
91 A S K P G K E T V L T M D I R S I Y - E I A D I K K A D S G 119
7342 CTTGATGATTTAAATAATTTTTGTATTATTGTACCAAAAAATTATGAGGATGATCTTATAAAAGCC---TCGCCACATATGATA 7422
120 L - D I K S V C K S L V G T V K S M G I K T I N P K K I 146
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8456
Protein: lcl|KC353356.1_cdsid_AGH24256.1 [gene=rpl11] [protein=ribosomal protein L11] [protein_id=AGH24256.1] [location=4796..5236] @ 0
DNA length: 876 Protein length: 146
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.13
8457 TGTGAACACTATATAAATTATTGGGAAAAAAATTCTGAAAATGTATGGACAACATATAAACCAAATGTCTTACCTCCTGAA---TTAGAT 8543
1 M S K I L G F I R I E I E S G K A N P S P P V G P A L G L R 30
8544 TTTTGGCATCCT---GATTATAATGAGGATGATGATGATGAATGTATTCCGCCTAATGATATGGAGATCTCT---TTTAGAACATTTATT 8627
31 G V N I M Q F C K D F N N R C K Q L G L K E G T P V P T I I 60
8628 CCTACTTATTTTGATGAGATATAT---TACGAGCAAAAAACACCTCATTTTTATTATATTATACGTCCAACAATAGAATGGTATAATAAT 8714
61 T V Y D D K T Y S F K M K T P S L T Y F I K K N L D L K K G 90
8715 TTATTTAAAGAATATAATGTTACCTGGAAATCTTGTGGAGATATAAAAAACACCATT---ATC---GAA---AAGGATCTTAATTTAATA 8795
91 A S K P G K E T V L T M - D I R S I Y E I A D I K K A D S G 119
8796 ATTAGATTAAAAAGTATTATAACAACACATGAGATAATTACTAAATGGACAAATGTACAACAA---AATATAAAAAATATT 8873
120 L D I K S V C K S L V G T V K S M G I K T I N P K K I 146
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62017
Protein: lcl|KC353356.1_cdsid_AGH24256.1 [gene=rpl11] [protein=ribosomal protein L11] [protein_id=AGH24256.1] [location=4796..5236] @ 0
DNA length: 876 Protein length: 146
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
62018 GTGAATAAAATTATCAATATTATTAATACTTCTCTAAAA------AAAGTATCACCACAAGCACTTATTGAACAAAATCGA---ATAGAA 62098
1 M S K I L G F I R I E I E S G K A N P S P P V G P A L G L R 30
62099 GCT---AATAAAATG---ATTATTTATGCATTCTGCGAACATTTTAAAAATGATAACTTATCTGATTTATTAGATGATCACAAAATTATT 62182
31 G V N I M Q F C K D F N N R C K Q L G L K E G T P V P T I I 60
62183 AATCGTATGCATGAT------TTTATTCATAAACAACCAACTCTTAGTTCAAGAGCATTT---CAATTAGCATTGGAAGTTTCATAT--- 62260
61 T V Y D D K T Y S F K M K T P S L T Y F I K K N L D L K K G 90
62261 TCTAAACGTTCTTTTAACGAAGCTACTTTGCAAGATTTTTTCAAAAATGAATTTAACATTAGAGATACCTTTAATGTTAATAATGGAGTA 62350
91 A S K P G K E T V L T M D I R S I Y E I A D I K K A D S G L 120
62351 TGTGATCAAAGCACTATTTTTTCAGCACTAATGGCTAAATAT---GTTGTATCTTATTATAATTTGAATTCAAAAGATATT 62428
121 - D I K S V C K S L V G T V K S M G I K T I N P K K I 146
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62414
Protein: lcl|KC353356.1_cdsid_AGH24256.1 [gene=rpl11] [protein=ribosomal protein L11] [protein_id=AGH24256.1] [location=4796..5236] @ 0
DNA length: 666 Protein length: 146
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.05
62415 ATTCAAAAGATATTATTGTTAATAGT-ACACCATTATATTTAACAAAA---GATATTTCTCCTGAAATAAAGGCCAGCATGGAATTTAAT 62500
1 M S K I L G F I R I E I E S G K A N P S P P V G P A L G L R 30
62501 AAAAATTTAACAGGAAATTCGTGTCCTGATATTACTTTAAAAGAACATCCTTATGATTTTAAAGATTCAAAGGATATAAAATGGAATAAA 62590
31 G V N I M Q F C K D F N N R C K Q L G L K E G T P V P - T I 59
62591 AATCAGATTTATTTGGTTGATAATACTAGTTTTAATGAACAGGCTATAATAATGTTAAATCATTTGGAAAAATCTTTG---ATTAATCAA 62677
60 I T V Y D D K T Y S F K M K T P S L T Y F I K K N L D L K K 89
62678 TTAACTGTTAATCATTTGATGTCTAGTGAATGTGTTCTTTATACTAAAGATATTTTAGCAATTATGAAAAATAAAAGTACGAGCTCTGCT 62767
90 G A S K P G K E T V L T M D I R S I Y E I A D I K K A D S G 119
62768 CAGGATATCTTTGAAAAAATACAAAAGCATCTTTTAAGTAACCAACCACCAAAAGATTTTCGA---ATT---CCACTTATTGTT 62845
120 L D I - K S V C K S L V G T V K S M G I K T I N P K K I 146
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33589
Protein: lcl|KC353356.1_cdsid_AGH24256.1 [gene=rpl11] [protein=ribosomal protein L11] [protein_id=AGH24256.1] [location=4796..5236] @ 0
DNA length: 876 Protein length: 146
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
33590 CAACCGAAAAGGTATCAACTAGATTCCTTGCATGTAATACAAAATAAATTGAATCCACAGATACAAGAG---CAACTGCTTGCGTATACT 33676
1 M S K I L G F I R I E I E S G K A N P S P P V G P A L G L R 30
33677 AAAACGAACCACGAGAAGTTACAAGAACTTTATAATCGTCAGGTTATATCTCATGTGCATCCCGAGACTACACATACAGCCTTATTTCAA 33766
31 G V N I M Q F C K D F N N R C K Q L G L K E G T P V P T I I 60
33767 ACGTATGTCCAAATAACAAGTTATCATGGAAAAACAACAATTCCAAATGCTTGTCAACTAAGTCGCTTAATTAATAGTATGACGAAAAAT 33856
61 T V Y D D K T Y S F K M K T P S L T Y F I K K N L D L K K G 90
33857 ACAACATTGTACTTTAATCGTCTAATTCTCTTAATAGATTTAGAGCCTATCTTA---ATGAATGGTTTTCGT---TTA---TCAAAACTT 33937
91 A S K P G K E T V L T M D I R S I Y E I A D I K K A D S G L 120
33938 AATATACTGACTCCCATAGCAGAGTATTATAATACTATGTTTTCCAATGCAGTATTAAAGGAAACAGAAAATAAACTC 34015
121 D I K S V C K S L V G T V K S M G I K T I N P K K I 146
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5369
Protein: lcl|KC353356.1_cdsid_AGH24257.1 [gene=rpl1] [protein=ribosomal protein L1] [protein_id=AGH24257.1] [location=5260..5943] @ 0
DNA length: 1362 Protein length: 227
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.06
5370 AAAGCTCTTTATACAAGTGAAGATTTA---GATATTTTGAGAGCCTTATATTGT---GAGCTTATGCCAAATATTATTCATTTAAAAATG 5453
1 M F F Q D S Y R I E D T I K L L K C F H L N S S L V D S K I 30
5454 TTTTTATCTAGGATAGAAGTTGTATCGGAAGTATCCTTAATGAAAACGTCAAAAATAGTAATA---TTTGGGGGGTATTTAGTATGTTGG 5540
31 T I G F V F S K S K S A S K K K M K T E Q S Y L T E L G K E 60
5541 GCTTATATATTAATTATAAGTTATTATAATTATCCT---ATAGATTTAATTATGAGTAAATATCTTTTATTAAATTTTATGTTATATTTG 5627
61 S Y F F P N F F G K S P T I V L F T T K M I D K S S M I D Y 90
5628 GTGAAAGAAGAAAATCCATTTATGGATTTCGATAGCGGTTCACATAATAAAAATCTATTAACAATA---GAAAATATTAAAAAGATATTA 5714
91 V G S E D L I K K I E E G S L N P N Y L V V L K E E A N L L 120
5715 TGCAAGATTATAAAAAATATTATACA-AAA---ATGGTC---AAA---AGAATAATAAAAATAATA---ATGCAAATGATAATAATAATT 5791
121 T K Y S R I L G P K G L M P S P K Q G T I I D N Q N N I L N 150
5792 TTAATAAATATATGTAAAATTATTACTTTCAAAGTAAAAGCAGATGAAAAAAATCAT---CAG---GAAGTCTTTGAA---AATTTTAGA 5872
151 I I E T L K K G S L K I K V N K Y N M I Q M S I G N I N M K 180
5873 AAAATA---CTTAAAGAAGGTTTGTTTAATATATTAGAAAAGTTGGATTGTCTTGAAGATTCACAAAC-AATGAAGGAAATAGTAGAAAC 5958
181 S I E L V E N V Q S L L G Y I K N R L P V S Y R K T N L K K 210
5959 ATTTATGGATAATTTAATGCTGGAAGAAT-TATATATTAAATACCTTGCAA 6008
211 I Y I T A T H G P S Y I L N H L K 227
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14998
Protein: lcl|KC353356.1_cdsid_AGH24257.1 [gene=rpl1] [protein=ribosomal protein L1] [protein_id=AGH24257.1] [location=5260..5943] @ 0
DNA length: 1362 Protein length: 227
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.07
14999 CAAAAATTTTATAATGCTCATTTTATAAAAGATGCCATA---ATTTATCAACATTTTGAATATTTTTATCTTCCAATAGAAATAAGC--- 15082
1 M F F Q D S Y R I E D T I K L L K C F H L N S S L V D S K I 30
15083 GGTGTTGGTCGCATACTAACAGTGTCACATATTTTAAGTTTTCAAACTAACAAGTTTGCAAGACCATTTCTTAATTATTTCATAAAAAAT 15172
31 T I G F V F S K S K S A S K K K M K T E Q S Y L T E L G K E 60
15173 AAAATTACTATG---GATTTCGAAATATATGATAAAATGAAAGCACTTTTTGCAAAT---TATCTTTCAGCAGATTCTACATTACAAAAT 15256
61 S Y F F P N F F G K S P T I V L F T T K M I D K S S M I D Y 90
15257 ATG---AGCTTTGATTTATTTGAAAAA---CAAACTAAAGATTTACAGGATGAACATTTAGCAAGCTTTTTCAATAAAAGTACACCATTA 15340
91 V G S E D L I K K I E E G S L N P N Y L V V L K E E A N L L 120
15341 ATACAACATAGCTTAAGTTTTGATTATTTATCTAAAATGATACACATAATTAAAAAT---TATGCTAAAAAACCTGGGGAGATATTAAAT 15427
121 T K Y S R I L G P K G L M P S P K Q G T I I D N Q N N I L N 150
15428 ATTCTTAGTATTTTATATTATAAAGAAAAAAATGCTTTATATAACAATAGTGAACTTGTT---ATATTTTTAGATAGTACAATGAGCGGG 15514
151 I I E T L K K G S L K I K V N K Y N M I Q M S I G N I N M K 180
15515 TCTCAACATTTAGCAACAATATTTAAAAATAAATTAGCA---GCTAAAAATAGTTGTTTAATTTCTACAGATGAAACTAAATTTGACTTA 15601
181 S I E L V E N V Q S L L G Y I K N R L P V S Y R K T N L K K 210
15602 AA-TATTA-ATTGCCTTGAAAAATTTCAGCTATTTATTACAAAAGCATTAT 15650
211 I Y I T A T H G P S Y I L N H L K 227
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15172
Protein: lcl|KC353356.1_cdsid_AGH24257.1 [gene=rpl1] [protein=ribosomal protein L1] [protein_id=AGH24257.1] [location=5260..5943] @ 0
DNA length: 1362 Protein length: 227
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 35 Length-adjusted: 0.15
15173 AAAATTACTATGGAT---TTCGAAATATATGATAAAATGAAAGCACTTTTTGCAAATTATCTTTCAGCAGATTCTACATTACAAAATATG 15259
1 M F F Q D S Y R I E D T I K L L K C F H L N S S L V D S K I 30
15260 AGCTTTGATTTATTTGAAAAACAAACTAAAGATTTACAGGATGAACATTTAGCAAGCTTTTTCAATAAAAGTACACCATTAATACAACAT 15349
31 T I G F V F S K S K S A S K K K M K T E Q S Y L T E L G K E 60
15350 AGCTTAAGTTTT---GATTATTTATCTAAAATGATACACATAATTAAAAATTATGCTAAAAAACCTGGGGAGATATTAAATATTCTTAGT 15436
61 S Y F F P N F F G K S P T I V L - F T T K M I D K S S M I D 89
15437 ATTTTATATTATAAAGAAAAAAATGCTTTATATAACAATAGTGAACTTGTTATATTTTTAGATAGTACAATGAGCGGGTCTCAACATTTA 15526
90 Y V G S E D L I K K I E E G S L N P N Y L V V L K E E A N L 119
15527 GCAACAATATTTAAAAATAAATTAGCAGCTAAAAATAGTTGTTTAATTTCTACAGATGAAACTAAATTTGACTTAAATATTAATTGCCTT 15616
120 L T K Y S R I L G P K G L M P S P K Q G T I I D N Q N N I L 149
15617 GAAAAATTTCAGCTATTTATTACAAAAGCATTATCTGACGAAACTTCTAAGTAT---TTAGCTAAATTTGACATAAACCGTAATGATTTA 15703
150 N I I E T L K K G S L K I K V N K Y N M I Q M S I G N I N M 179
15704 TATGCATTGAATTTAGCAGAAATTTCTAATTTACTTTGTAAAAAAATATTTAATTCTGAAATTACTATTTCATGTTTAAAGTCATATTTA 15793
180 K S I E L V E N V Q S L L G Y I K N - R L P V S Y R K T N L 208
15794 AAAAAAATGGCTTTTAAATATGAAGTGACTCCTTGTGCAATTTCCGATACTTATTCT 15850
209 K K I Y I T A T H G P S Y I L N H L K 227
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15826
Protein: lcl|KC353356.1_cdsid_AGH24257.1 [gene=rpl1] [protein=ribosomal protein L1] [protein_id=AGH24257.1] [location=5260..5943] @ 0
DNA length: 1362 Protein length: 227
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.01
15827 TGTGCAATTTCCGATACTTATTCTTTTCCTGATTCTTTTATGCAAGAATGTAAATGTATAATATCAGATAAAGTTTTAATGAAGATATCA 15916
1 M F F Q D S Y R I E D T - I K L L K C F H L N S S L V D - S 28
15917 AAGAAAAAGAAAACTATTGTATTTTTAAAAAAACTATTAATAGTTTTTTATGATTATGCTATAAATAAAATAAATAAAAAAGAACCTTGG 16006
29 K I T I G F V F S K S K S A S K K K M K T E Q S Y L T E L G 58
16007 ATTTTAGAAAATATCATGGATCGGATTATAATTAAACAAAGTACAATGGCAGATCTTTACGGAATGACAATAGGAGGTAGTCGTAAA--- 16093
59 K E S Y F F P N F F G K S P T I V L F T T K M I D K S S M I 88
16094 TCT---ATTTCAAATGCGCTCATTGAAAAAATAATTGAAAAAGGAAAATTTGATATAAAC---CTTTCTTATATTCACATATTTTCTGAT 16177
89 D Y V G S E D L I K K I E E G S L N P N Y L V V L K E E A N 118
16178 ATATTATCTAAATATTATAAATATTTTTATAAAACTAATTATTTACCTTAT---TGTGAT---ACTTATTTA---ACATTACGAGAATTT 16258
119 L L T K Y S R I L G P K G L M P S P K Q G T I I D N Q N N I 148
16259 CTAAAGAAAATGGAAGGTCCTTTAACAATGTCAACAGAATTTTTAACATGGTCATATAATCCAAGAAAAATGAAAATATTACGTATAAAT 16348
149 L N I I E T L K K G S L K I K V N K Y N M I Q M S I G N I N 178
16349 GTTGTAAAATATTCAAAAATAACAAATGACCTTAAATCTTTGAAACGACGTATGATTAAC---GTAGCATATTTTACAGGAAAAATTGAT 16435
179 - M K S I E L V E N V Q S L L G Y I K N R L P V S Y R K T N 207
16436 CAAACTAAAATATATAACTCAGTTTCT---------GCTTTTATTATA---CATACAGAG 16483
208 L K K I Y I T A T H G P S Y I L N H L K 227
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1742
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.04
1743 ATTGATCTTAAACGTGAAACAATTATCCCTAGATTTGAAATTGAAACT---GAAACAATACCACCTACAATAGTA---AATCCACCGGAT 1826
1 M K K Q K K F L V S E E Y I K I F N T F P F I V A F H Y N H 30
1827 GTTATTAATAATGATTTACCTTTTGAAGAACCTGTTGAGGAGCCTATTGAAATAAAAGTAGAATTTTTTAATGCTTATACGGATCTTATG 1916
31 L V I N D S V L E T K K Q E L Q Q L L E T I C V K E K P S V 60
1917 AATATAGAAGATGTA---GATAGTGTAATTTCTCCAAGTTTTGAAGGCTCTCGTATTTATAGTGACGATGCAATTTTTCAGTTACATTTA 2003
61 N L K V V K N K L M Q S S L K K S K Y R N I S T L F S - G P 89
2004 GATATTACTGAATTTGTTACACAAAAAATAAGGGTTTCAACAGAAGATATATCTGTAACAATTATACGAAATACAGTCCATGAATATTTT 2093
90 T I L L Y L T I A S P V I C E K L - L E W K K N D D N F I F 118
2094 ATAAAAAGTAATTTAAATAGTAATCTT---ACACCGTCTGATTTGCAAAACACTAATCATTTAATTAATTTATTACTTAAGGAACTAATT 2180
119 L G G K Y E D D L I S V N D L I E I T K L - S K T I E E G I 147
2181 GTCAATAGTTTTTTTGCCGCTGACAACGAAAGTTTTATAATGAAACAAATTGCAACATCCCTAATAGTTGAAGTTTTAAGTAATTTAGAA 2270
148 V K K I T L L N N P M M E L I N V L S Q N Q L Q T L N T L Q 177
2271 AATGTGGATTCTAACTGT 2288
178 M I K K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2764
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.07
2765 CTAAAAAAAAATGTTGAATTTAAATTCCATAAACCTGAGTCTGATAATTAT---ACAGTGCCT---ATTACAGCCGTT---TATGAT--- 2842
1 M K K Q K K F L V S E E Y I K I F N T F P F I V A F H Y N H 30
2843 ACAAAACAAGGATCATCCGATATTCAATATAATTTAGAAAAAATAATTAAAGATTTGAAA---ATAGCTATACAGGAAAAA---TCTTTG 2926
31 L V I N D S V L E T K K Q E L Q Q L L E T I C V K E K P S V 60
2927 AATAAAGAACAAGTAAAAAGC---ATTATTGATGAT---ATTCGTAAAAAT---TATGTTACTAAAGGGGTTAGTATAGAGAATGCTAAT 3007
61 N L K V V K N K L M Q S S L K K S K Y R N I S T L F S G P T 90
3008 GAACTTTTAACTCTTTGGAAGTCTTATGATTTTCAATATGAACCTTTAAAACAAATTTGTAAAATTAAAAAAGATATTATT---ATAAAT 3094
91 I L L Y L T I A S P V I C E K L L E W K K N D D N F I F L G 120
3095 AAAGAACAAGAAAAAATTGTTATAGATTCTAAATCATCTTATGAA---GAAAAATTG---AAAAATTTAGAAGAAAAAATGTCAATAGCT 3178
121 G K Y E D D L I S V N D L I E I T K L S K T I E E G I V K K 150
3179 CTTAAAAATATAAATAAT---TTTCTTGAAAAAAATAAAGATTATACTAAAGAATTTCTTGAAGCAAAAGAATTACAAGAATGGTATGAT 3265
151 I T L L N N P M M E L I N V L S Q N Q L Q T L N T L Q M I K 180
3266 TATTTTCAG 3274
181 K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3019
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 33 Length-adjusted: 0.18
3020 CTTTGGAAGTCTTATGATTTTCAATAT---GAACCTTTAAAACAAATTTGTAAAATTAAAAAAGATATTATTATAAATAAAGAACAAGAA 3106
1 M K K Q K K F L V S E E Y I K I F N T F P F I V A F H Y N H 30
3107 AAAATTGTTATAGATTCTAAA---TCATCTTATGAAGAAAAATTGAAAAATTTAGAAGAAAAAATGTCAATAGCTCTTAAA---AATATA 3190
31 L V I N D S V L E T K K Q E L Q Q L L E T I C V K E K P S V 60
3191 AATAATTTTCTTGAAAAAAATAAAGATTATACTAAAGAATTTCTTGAAGCAAAAGAATTACAAGAATGGTATGATTATTTTCAGAATAGA 3280
61 N L K V V K N K - L M Q S S L K K S K Y R N I S T L F S G P 89
3281 GGAGCATTAAAAAAATTATCAAAACAAGAAAAAGAAGTTTATGATAAATTATTAGAAATAAAA---AATAAA---TATTTACCTAGCGAA 3364
90 T I L L Y L T I A S P V I C E K L L E W K K N D D N F I F L 119
3365 AAAGATTTTCAAGAAAAAAATAGTAGTTATTTGACACCTCTGAAAAAAAATAGTGCTTTACCTATTAATTTACAAAATGAAAAATCAGCT 3454
120 G G K Y E D D L I S V N D L I E I T K L S K T I E E G I V K 149
3455 AAATGTTACTTGCCAAAAGATTATGTTATGGAAATAACAAATATA------GAACGTGCTCTTGAAATTTTAAATAAATCACAAACATTA 3538
150 K I T L L N N P M M E L I N V L S Q N Q L Q T L N T L Q M I 179
3539 TCTATTAATGAT 3550
180 K K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3331
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
3332 TTAGAAATAAAAAATAAATATTTACCTAGCGAAAAAGATTTTCAAGAAAAAAATAGT---AGTTATTTGACACCTCTGAAAAAAAATAGT 3418
1 M K K Q K K F L V S E E Y I K I F N T F P F I V A F H Y N H 30
3419 GCTTTACCTATTAATTTACAAAATGAAAAATCAGCTAAATGTTACTTGCCAAAAGATTAT---GTTATGGAAATAACAAATATAGAACGT 3505
31 - L V I N D S V L E T K K Q E L Q Q L L E T I C V K E K P S 59
3506 GCT---CTTGAAATTTTA---AATAAATCACAAACATTATCTATTAATGATCTTAAATTGTTATCCATTAATTCTTCGGCAGTTACTATA 3589
60 V N L K V V K N K L M Q S S L K K S K Y R N I S T L F S G P 89
3590 GATACAGAAGGTGTTATTAAAATATCACAAGAGGCGTAT---CAGTCTTTTACTAAATATAAAGATAGCTTAGGATTTAAATATTTATTA 3676
90 T I L L Y L T I A S P V I C E K L L E W K K N D D - N F I F 118
3677 GAATATCCAAAAACAGAAGAAATATTATTACGTATAAAAGAAAGGAATTTTTTTATTGCTAAAAATATGGATTCTAATCCTAATGGAATT 3766
119 L G G K Y E D D L I S V N D L - I E I T K L S K T I E E G I 147
3767 ATTGCTTTAGCTCACCTATCACATAATACATTAATT---ATTCCAAACCAAACCGAGAAAAATTTATATGTTAGGGTAGGGCTTGTTACT 3853
148 V K K I T L L N N P M M E L I N V L S Q N Q L Q T L N T L Q 177
3854 AGTACTAAAAGTGATTCT 3871
178 M I K K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4082
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.10
4083 CAAAAAATATATGGTCCGAAAATTATTACCAATATCCTTTTAATGTGGATCAAGAATTTT---TAC---GTCAACTTTCTATTATTTTTT 4166
1 M K K Q K K F L V S E E Y I K I F N T F P F I V A F H Y N H 30
4167 ATAGTAATAAATTACAAGAA-CTTCAACAGGATTATAAAGAACTACAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAAGACTAT 4255
31 L V I N D S V L E T K K Q E L Q Q L L E T I C V K E K P S V 60
4256 AAT---AAGGAAATA---GATCGCCTTAATGAATTAAAAACAAATTATTTGAAAGATAGAAAATATAAACAATATTTTAATTCATTAACA 4339
61 N L K V V K N K L M Q S S L K K S K Y R N I S T L F S G P T 90
4340 GATGAAGAACAA---AAATTAGTTTCTCAT---ATA------AAAATTTTTCAAGATAAGATTAAAGATGATAAT---ATACAAAATGAA 4414
91 I L L Y L T I A S P V I C E K L L E W K K N D D N F I F L G 120
4415 AAAAAACAAAAGAAAGAACTTATT------AATCAACTTTTGGAAAAAAATAAAAAAGGAAAAGATAAAGAAGAAGGA---ACAGAAATT 4495
121 G K Y E D D L I S V N D L I E I T K L S K T I E E G I V K K 150
4496 TTAACTGCAAAACAAAAAAAGGAGAAATATCTAAAGGATAAACAAAATATAAATAATATCGATGAAAAGAATAATTGATTATTTTTTAAT 4585
151 I T L L N N P M M E L I N V L S Q N Q L Q T L N T L Q M I K 180
4586 AATATATTA 4594
181 K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4447
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.02
4448 TTGGAAAAAAATAAAAAAGGAAAAGATAAAGAAGAAGGAACAGAAATTTTAACTGCAAAACAAAAAAAGGAGAAATATCTAAAGGATAAA 4537
1 M K K Q K K F L V S E E Y I K I F N T F P F I V A F H Y N H 30
4538 CAAAATATAAATAATATCGATGAAAAGAATAATTGATTATTTTTTAATAATATATTATTATTTATTATTATTTATAGGTCTAATAATGA- 4626
31 L V I N D S V L E T K K Q E L Q Q L L E T I C V K E K P S V 60
4627 CATCTTGG-ATAATTTGGAGTAGATTTATTCGATCTCGTACTATTAGAGAACTACCTGATTCTTTATTAACAGAATATCGCTTT---TGG 4712
61 N L K V V K N K L M Q S S L K K S K Y R N I S T L F S G P T 90
4713 ATTTTAATTTATATTTGTTGCATATAT---ATATATAGTATTAAAAATATT---CTGAAGGCTTCAGGAGATAACTATCTTAATTTAAAA 4796
91 I L L Y L T I A S P V I C E K L L E W K K N D D N F I F L G 120
4797 GATATTATAGAGATATTGTATGCACCTTTGAAAACTATAGATCATGCTATTAAATATAATAAATATATTAAACCTTATTATTACAAATTT 4886
121 G K Y E D D L I S V N D L I E I T K L S K T I E E G I V K K 150
4887 GTGAGTAAATTTTATAAC---TTTACTGAAACAAAAAATATA---AATGATGACCAGATACAAGTATTTGTCTTTTTTATGCAGATATTT 4970
151 I T L L N N P M M E L I N V L S Q N Q L Q T L N T L Q M I K 180
4971 CCTAGAATT 4979
181 K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5309
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.03
5310 ACTCCTTATTGTAAAAGTGAAGTCTATAATGAATATTGTTTAAATAAATATAAAAATAAAAAAGCTCTTTATACAAGTGAAGATTTAGAT 5399
1 M K K Q K K F L V S E E Y I - K I F N T F P F I V A F H Y N 29
5400 ATTTTGAGAGCCTTATATTGTGAGCTTATGCCAAATATTATTCATTTAAAAATGTTTTTATCTAGGATAGAAGTTGTATCGGAAGTATCC 5489
30 H L V I N D S V L E T K K Q E L Q Q L L E T I C V K E K P S 59
5490 TTA---ATGAAAACGTCAAAAATAGTAATATTTGGGGGGTATTTAGTATGTTGGGCTTATATATTAATTATAAGTTATTATAATTATCCT 5576
60 V N L K V V K N K L M Q S S L K K S K Y R N I S T L F S G P 89
5577 ---ATAGATTTA---ATT---ATGAGTAAATATCTTTTATTAAATTTTATGTTATATTTGGTGAAAGAAGAAAATCCATTTATGGATTTC 5657
90 T I L L Y L T I A S P V I C E K L L E W K K N D D N F I - F 118
5658 GATAGCGGTTCACATAATAAAAATCTATTAACAATAGAAAATATTAAAAAGATA------TTATGCAAGATTATAAAAAATATTATACA- 5740
119 L G G K Y E D D L I S V N D L I E I T K L S K T I E E G I V 148
5741 AAAATGGTCAAAAGAATAATAAAAATAATAATGCAAATGATAATAATAATTTTAATAAATATATGTAAAATTATT---ACTTTCAAA--- 5824
149 K K I T L L N N P M M E L I N V L S Q N Q L Q T L N T L Q M 178
5825 GTAAAAGCAGATGAA 5839
179 I K K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5507
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.08
5508 ATAGTAATATTTGGGGGGTATTTAGTATGTTGGGCTTATATATTAATTATAAGTTATTATAATTATCCTATAGATTTAATTATGAGTAAA 5597
1 M K K Q K K F L V S E E Y I K I F N T F P F I V A F H Y N H 30
5598 TATCTTTTATTAAATTTTATGTTATATTTGGTGAAAGAAGAAAATCCATTTATGGATTTCGATAGCGGTTCACATAATAAAAATCTATTA 5687
31 L V I N D S V L E T K K Q E L Q Q L L E T I C V K E K P S V 60
5688 ACAATAGAAAATATTAAAAA-GATATTATGCAAGATTATAAAAAATATTATACAAAAATGGTCAAAAGAATAATAAAAATAATAATGCAA 5776
61 N L K V V K N K L M Q S S L K - K S K Y - R N I S T L F S G 88
5777 ATGATAATAATAATTTTAATAAATATATGTAAAATTATTACTTTCAAAGTAAAAGCAGATGAAAAAAATCATCAGGAAGTCTTTGAAAAT 5866
89 P T I L L Y L T I A S P V I C E K L L E W K K N D D N F I F 118
5867 TTTAGAAAAATACTTAAAGAAGGTTTGTTTAATATATTAGAAAAGTTGGATTGTCTTGAAGATTCACAAACAATGAAGGAA---ATAGTA 5953
119 L G G K Y E D D L I S V N D L I E I T K L S K T I E E G I V 148
5954 GAAACATTT---ATGGATAATTTAATGCTGGAAGAATTATATATTAAATACCTTGCAAAAGATGAAAAAGATTATGAAGGTTTTATGAAA 6040
149 K K I T L L N N P M M E L - I N V L S Q N Q L Q T L N T L Q 177
6041 GAAATTCAATCATTATTA 6058
178 M I K K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6393
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.02
6394 GTAAGTATGATGCGAACTTTAATACTTAATAAAAAAATAAATAGCTTTCTGTATCTTTGTAAGCCGATAGTCATTCAAATATCTAAGCGT 6483
1 M K K Q K K F L V S E E Y I K I F N T F P F I V A F H Y N H 30
6484 TTTTATCCCACTGATAAAAAAATAGGTCATGCTAAAAAATTGCTTGATCACCGTTCAATGTCTTTTTCT---AAAAGAATTTCGAATCCA 6570
31 L V I N D S V L E T K K Q E L Q Q L L E T I C V K E K P S V 60
6571 CAATGTCGTAAATTGCGTCAACAATGTAAACAGCATCATAATAAATATATTACTGATACAAAAATACAAACTAGACATAGAGGTTTAAGC 6660
61 N L K V V K N K L M Q S S L K K S K Y R N I S T L F S G P T 90
6661 AATAGAGAATTACAAGGTATTCGATCTCCATTGAGTAGTAAAAAGTTTAAGGAGGTAAATAATATTGATATGAAAAATCCTTTTCAAAAC 6750
91 I L L Y L T I A S P V I C E K L L E W K K N D D N F I F L G 120
6751 TCACAAAAAGTGTCAGAACCTTTTTCA------CCTCTTACAAGTATAACTAAAACCTGTAAAACAACATTTAAATCCTTTATTAAAAAA 6834
121 G K Y E D D L I S V N D L I E I T K L S K T I E E G I V K K 150
6835 GATTCATTATCAATTGCCTCTAACCAAATACCATTGCCTGAGAGTATAAAT---AACACAATAAGTCACGAAAATCAAAATATAAATCTT 6921
151 I T L - L N N P M M E L I N V L S Q N Q L Q T L N T L Q M I 179
6922 AGTGATCCTACA 6933
180 K K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9145
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.01
9146 CTTCTTATTCAAAAAAACTACTTTATACAATATACATTCCAAAAATATCAGGAGTTACTCTACCCGAATATCCTTTAAAAGATGTTCAAA 9235
1 M K K Q K K F L V S E E Y I K I F N - T F P F I V A F H Y N 29
9236 AAGCTAATTTTATCCAGTTCTTTAATAGT-ATAGTTAAAAATGACCCAATATGGGATAATTTATGTCAAACATATAATAAAGTAAATTCT 9324
30 H L V I N D S V L E - T K K Q E L Q Q L L E T I C V K E K P 58
9325 TCATTTTTTTATCAAAAAATTAAAGATGCTTATATTAACTTAACTTTACAAACAGCTCATTATAAAGAACAAATAGCTATTTATTTATCA 9414
59 S V N L K V V K N K L M Q S S L K K S K Y R N I S T L F S G 88
9415 ---TTTATCTTAAAATTGATTGAAATG---CACCCTCAAATACCTATTAAAGATATGTGCTTAAAAGCAGTCAATTATGATGTTTATTTT 9498
89 P T I L L Y L T I A S P V I C E K L L E W K K N D D N F I F 118
9499 GACATAAATGAGCAGGATAGTTTTTATGTTACAATAAAACAG---AATCCTTATAGTCCTATTGAAATTAGTCTTCAACATGATAATATT 9585
119 L G G K Y E D D L I S V N D L I E I T K L S K T I E E G I V 148
9586 TGTTTGCACACTTTCCATTTATTACTTATTGAAGAAATATTTCTACAAAACTTTCAAGATAATATTGAACCATTTTCTGATCTC---TTA 9672
149 K K I T L L N N P M M E L I N V L S Q N Q L Q T L N T L Q M 178
9673 CTTAAAGATGAAAAT 9687
179 I K K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9772
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 38 Length-adjusted: 0.21
9773 TTAATAAAATTTAAATATTATTTCATGATA------TTTATTGTTTTAACACTAAGTTTATGTTTTGCAATTATTATACATTATAATTAT 9856
1 M K K Q K K F L V S E E Y I K I F N T F P F I V A F H Y N H 30
9857 ---AATAAAAATAAAAAACTACTAATTAATAAAAAACAAGAGCTTTCTAAACTATTAGATTATTTATATATCAAAGATATAAAAATGGAA 9943
31 L V I N D S V L E T K K Q E L Q Q L L E T I C V K E K P S V 60
9944 ATATTAGATTTATTTTTATTAAACTTATTTACAATAGGATTGATTTTTTCCTTAAGAAATCTTAATATTGGAGCAACCATAAATATTTTC 10033
61 N L K V V K N K L M Q S S L K K S - K Y R N I S T L F S G P 89
10034 TTATTTCGACCAAGTCTTGTAATATTATCGCAAATTATTTCACTTTGTGTATTAATGTATGTTTTTTACATTTATAACTTAGTT---ATA 10120
90 T I L L Y L T I A S P V I C E K L L E W K K N D D N F I F L 119
10121 AAATACAAATTTTACAAAATTTATTTATTTATGTGCCAATTTGAAACTTTTATAAAAATATGTGAC---ATTTTTACAGGTGGATATCGA 10207
120 G G K Y E D D L I S V N D L I E I T K L S K T I E E G I V K 149
10208 TTCTATGAACTTTTATACGATAACTTACATGATTTTATTTATATT---AAACTAAAACCAATTAATAAAATAAACTCT---TCTTATTTA 10291
150 K I T L L N N P M M E L I N V L S Q N Q L Q T L N T L Q M I 179
10292 CAAGTGCTAATG 10303
180 K K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12366
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
12367 TTTGAGAAAAAAAAAGATTTTATGTTTGATGGCTTGCTTAATAAAAATTTTTATAATGTACAATATTTTATA---TTTGCTAATAACAAA 12453
1 M K K Q K K F L V S E E Y I K I F N T F P F I V A F H Y N H 30
12454 AGTACTTTAAACATGAAAACCAATATAGATTATTTATATTTTATGGAAAAATTAAAAGAAGAAACTACTATTAAATATATTTTAAAT--- 12540
31 L V I N D S V L E T K K Q E L Q Q L L E T I C V K E K P S V 60
12541 GATTTTGAACAAGTACCAGAAGAGTTAGTCAATAAACAAATAAATCAAATGTACTTACGTTTTAGTATAATACTAATATTACTTTTTATG 12630
61 N L K V V K N K L M Q S S L K K S K Y R - N I S T L F S G P 89
12631 ACAATTTTTCTTTATGATGTTATTAGATATTCTATAATAATA---AAAATACTTAATTACAATATATATTCT---TTTTTTATTCTATTG 12714
90 T I L L Y L T I A S P V I C E K L L E W K K N D D N F I F L 119
12715 CCATTAATTTTTATATTATATTCAGCAACTAAAATTTTTACTTTGTCTAATACAGCTGAAATTGATGATTTTACAGAATATGTCTTTAAT 12804
120 G G K Y - E D D L I S V N D L I E I T K L S K T I E E G I V 148
12805 AAAAAATTCAATATTATTTCTTGGATTTTAATATCA---ATTCATTATTTATATTTTTAATAATATTACAACCAAAAT---TTATTTTTA 12888
149 K K I T L L N N P M M E L I N V L S Q N Q L Q T L N T L Q M 178
12889 TGGAAACCGAAATTT 12903
179 I K K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13981
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
13982 TATTCAATTCCTGAAAAC---ATCGTATGTGAATTAGCAATAGGTATA---GGTACT---TCTTATATT---GAATGGTGGTACAGT--- 14056
1 M K K Q K K F L V S E E Y I K I F N T F P F I V A F H Y N H 30
14057 ATTTTTATTAATAAAAATATGTATAAAAATAAAACTTATGAAGAATTTTGCACTTTATTTTGTGAAACATACAAAATAAAAACAAAATCG 14146
31 L V I N D S V L E T K K - Q E L Q Q L L - E T I C V K E K P 58
14147 GATAAAATTTTCAAATGGCTTTGGAATAAAGAAAACAATCCAGATGATTTATTAGAACAAACAGGCGCCTTTGCAGTAAGAATA---GGT 14233
59 S V N L K V V K N K L M Q S S L K K S K Y R N I S T L F S G 88
14234 TCTTATCTTATTGAATATTTG---ATAAAACATAACATTTTTAAAGAATCGAGTACTGCTGGATCTAATAATCCAAGATCT---TTAAGT 14317
89 P T I L L Y L T I A S P V I C E K L L E W K K N D D N F I F 118
14318 TTGAATGAAAAATATGAAGATAGTATTACTACATCTAATCTTTTTGTTAAACCAATT---TTATACCCAGAAATGTCTTATGAATTTGAA 14404
119 L G G K Y E D D L I S V N D L I E I T K L S K T I E E G I V 148
14405 TCTAAAATCGAGCGC---AAAAGTTTTTCATTTAAACTATTAAAGAAACAAGAGCAGGCTAAAATACCAAAATTC---ACTTATAAAAAA 14488
149 K K I T L L N N P M M E L I N V L S Q N Q L Q T L N T L Q M 178
14489 ACATCTAAATTAAAT 14503
179 I K K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15094
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.02
15095 ATACTAACAGTGTCACATATTTTA---AGTTTTCAAACTAACAAG---TTTGCAAGA---CCATTTCTTAATTATTTCATAAAAAATAAA 15175
1 M K K Q K K F L V S E E Y I K I F N T F P F I V A F H Y N H 30
15176 ATTACTATGGATTTCGAAATATATGATAAAATGAAAGCACTTTTTGCAAATTATCTTTCAGCAGATTCTACATTACAAAATATGAGCTTT 15265
31 L V I N D S V L E T K K Q E L Q Q L L E T I C V K E K P S V 60
15266 GATTTATTTGAAAAACAAACTAAAGATTTACAGGATGAACATTTAGCAAGCTTTTTCAATAAAAGTACACCATTAATACAACATAGCTTA 15355
61 N L K V V K N K L M Q S S L K K S K Y R N I S T L F S G P T 90
15356 AGTTTTGATTATTTATCTAAAATGATACACATAATTAAAAATTATGCTAAAAAACCTGGGGAGATATTAAATATTCTTAGTATTTTATAT 15445
91 I L L Y L T I A S P V I C E K L L E W K K N D D N F I F L G 120
15446 TATAAAGAAAAAAATGCTTTATATAACAATAGTGAACTTGTT---ATATTT---TTAGATAGTACAATGAGC---GGGTCTCAACATTTA 15526
121 G K Y E D D L I S V N D L I E I T K L S K T I E E G I V K K 150
15527 GCAACAATATTTAAAAATAAATTAGCAGCTAAAAATAGTTGTTTAATTTCTACAGATGAAACTAAATTTGACTTAAATATTAATTGCCTT 15616
151 I T L L N N P M M E L I N V L - S Q N Q L Q T L N T L Q M I 179
15617 GAAAAATTTCAG 15628
180 K K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45917
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.11
45918 AAGAATCCTGAAAAAAAATATCTATTTTCTGTA---TATATTCTTGTTAGCGGTAAAAGAGCTAACGTGTTACCTTCCGAA---GCGAAA 46001
1 M K K Q K K F L V S E E Y I K I F N T F P F I V A F H Y N H 30
46002 ATATTAATATCTGATGCCCTGGACGAATTAAACGATTCAAAATTGGCTAAGATTGGGGATAAGAAATATACTATACTAAAAAGAGTCCTT 46091
31 L V I N D S V L E T K K Q E L Q Q L L E - T I C V K E K P S 59
46092 AAACGTTTTGAAAGTATACGTACTCGTTTATCGAAAGTT---TTAAACGGCTCCGAATTTTCGGATACCATAGCCAATGACACAGGTCAT 46178
60 V N L K V V K N K L M Q S S L K K S K Y R N I S T L F S G P 89
46179 GTTAAGAAATCTATTATGAATTTAATACTTCGCAGCAAAGATCAAAAACCATTTACA---TCATTTAATATA---AATATTCTAACTATA 46262
90 T I L L Y L T I A S P V I C E K L L E W K K N D D N F I F L 119
46263 GCAAAACGTATCAAGGATTATGTTATTAATGATAATGATATTCTTATGAATACGGATAAAGATAAATTGGCTCAAGCTATTGAAAGTGCT 46352
120 G G K Y E D D L I S V N D L I E I T K L S K T I E E G I V K 149
46353 AAACTTATTGATTTATCTAAACCTAAA---AAATCTAAAAATAAAATAGATCCTTCTAAA---GCTGTTGTTAATACTACTAGTAAAAAG 46436
150 K I T L L N N P M M E L I N V L S Q N Q L Q T L N T L Q M I 179
46437 AAAAATAAAAGG 46448
180 K K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61762
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.03
61763 ATACGTGAAATTTTTTATTTTCATGAATTAATTACATATTTAAAAATAATACCTATAAAATTTGATAAAATTTCTTTAATTTTTGATAAT 61852
1 M K K Q K K F L V S E E Y I K I F N - T F P F I V A F H Y N 29
61853 TTACAAAATATTAATCTTATTAATTATGATTTTAATAAAAAAAACGAAAATATGATTTTATATCAATATGCTATAATTTTC---CCTATG 61939
30 H L V I N D S V L E T K K Q E L Q Q L L E T I C V K E K P S 59
61940 ATTTATAAGGGAAATACAAAAAATTTTATTTGTAAAAAAATTACCATAAAAAATTTTATCCGT---TTTTATCCAGGTCATGTGAATAAA 62026
60 V N L K V V K N K L M Q S S L K K S K Y R N I S T L F S G P 89
62027 ATTATCAATATTATTAATACTTCTCTAAAAAAAGTATCACCACAAGCACTTATTGAACAAAATCGAATAGAAGCTAATAAAATGATTATT 62116
90 T I L L Y L T I A S P V I C E K L L E W K K N D D N F I F L 119
62117 TATGCATTCTGCGAACATTTTAAAAATGATAACTTATCTGATTTATTAGATGATCACAAAATTATTAATCGTATGCATGATTTTATTCAT 62206
120 G G K Y E D - D L I S V N D L I E I T K L S K T I E E G I V 148
62207 AAACAACCAACTCTTAGTTCAAGAGCATTTCAATTAGCATTGGAAGTTTCATATTCTAAACGTTCTTTTAACGAAGCTACTTTGCAAGAT 62296
149 K K I T L L N N P M M E L I N V L S Q N Q L Q T L N T L Q M 178
62297 TTTTTCAAAAATGAA 62311
179 I K K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62179
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 825 Protein length: 183
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.11
62180 ATTAATCGTATGCATGATTTTATTCATAAACAACCAACTCTTAGTTCA---AGAGCATTTCAATTAGCATTGGAAGTTTCATATTCTAAA 62266
1 M K K Q K K F L V S E E Y I K I F N T F P F I V A F H Y N H 30
62267 CGTTCTTTTAACGAAGCTACTTTGCAAGATTTTTTCAAAAATGAATTTAACATTAGAGATACCTTTAATGTTAATAATGGA---GTATGT 62353
31 L V I N D S V L E T K K Q E L Q Q L L E T I C V K E K P S V 60
62354 GATCAAAGCACTATTTTTTCAGCACTAATGGCTAAATATGTTGTATCTTATTATAATTTGAATTCAAAAGATATTATTGTTAATAGTACA 62443
61 N L K V V K N K L M Q S S L K K S K Y R N I S T L F S G P T 90
62444 CCATTATATTTAACAAAAGATATTTCTCCTGAAATA---AAGGCCAGCATGGAATTTAATAAAAATTTAACAGGAAATTCGTGTCCTGAT 62530
91 I L L Y L T I A S P V I C E K L L E W K K N D D N F I F L G 120
62531 ATTACTTTAAAAGAACATCCTTATGATTTTAAAGATTCAAAGGATATA---AAATGGAATAAAAAT---CAGATTTATTTGGTTGATAAT 62614
121 G K Y E D D L I S V N D L I E I T K L S K T I E E G I V K K 150
62615 ---ACTAGTTTTAATGAACAGGCTATAATAATGTTAAATCATTTGGAAAAATCTTTGATTAATCAATTAACTGTTAATCATTTGATGTCT 62701
151 I T L L N N P M M E L I N V L S Q N Q L Q T L N T L Q M I K 180
62702 AGTGAATGT 62710
181 K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33703
Protein: lcl|KC353356.1_cdsid_AGH24258.1 [gene=rpl10] [protein=ribosomal protein L10] [protein_id=AGH24258.1] [location=6011..6562] @ 0
DNA length: 1098 Protein length: 183
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.02
33704 GTTAAAACGGATGAAGTGGGAGTAATCCACAAAGAAGTGTT-TACCTTTTTCCTTCTCTAAAGTATAATCTCTAGAATGGACATTATCAA 33792
1 M K K Q K K F L V S E E Y I K I F N T F P F I V - A F H Y N 29
33793 CAT---GTT---AATCGCAATCCTTTTAAAACCCCATATAGTAACATGACTAAT------AATAATATAAACACATCCCCTACT---ACA 33867
30 H L V I N D S V L E T K K Q E L Q Q L L E T I C V K E K P S 59
33868 TTAAATATAAATCCGCTTAGCAAGAAGCAAAGTCAAAGAACCTCTCCGAATAAAAAAAGCTTATCACAACCGAAAAGGTATCAACTAGAT 33957
60 V N L K V V K N K L M Q S S L K K S K Y R N I S T L F S G P 89
33958 TCCTTGCATGTAATACAAAATAAATTGAATCCACAGATACAAGAGCAACTGCTTGCGTATACTAAAACGAACCACGAG---AAG---TTA 34041
90 T I L L Y L T I A S P V I C E K L L E W K K N D D N F I F L 119
34042 CAAGAACTTTATAATCGTCAGGTTATATCTCATGTGCATCCCGAGACTACACATACAGCCTTATTTCAAACGTATGTCCAAATAACAAGT 34131
120 G G K Y E D D L I S - V N D L I E I T K L S K T - I E - E G 146
34132 TATCATGGAAAAACAACAATTCCAAATGCTTGTCAACTAAGTCGCTTAATTAATAGTATGACGAAAAATACAACATTGTACTTTAATCGT 34221
147 I V K K I T L L N N - P M M E L I N V L S Q N Q L Q T L N T 175
34222 CTAATTCTCTTAATAGATTTAGAG 34245
176 L Q M I K K E E 183
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2587
Protein: lcl|KC353356.1_cdsid_AGH24261.1 [gene=rps12] [protein=ribosomal protein S12] [protein_id=AGH24261.1] [location=15356..15751] @ 0
DNA length: 786 Protein length: 131
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.05
2588 ATTCCTACTGAAAAAAGTGAAGAACCAATT---AAATCTGCAGCAGTTAAAGAAGAAGAAAAAAAAATAATAGAAAAACTTATAGAAGCT 2674
1 M P T K N Q L L K I S K K R K S D K A E R R E F S K A P A L 30
2675 GATACTATAGCGGAAAAAATACAAGGTAATTCTCATATTTTTAATCCATTAAGATTAGTTTATAACACCAGTAGT---AAAGTATGGAAT 2761
31 N S C P Q K R G V C T R V F I A S P K K P N S A K R K V A R 60
2762 TAC---CTAAAAAAAAATGTTGAATTTAAATTCCATAAACCT---GAGTCTGATAATTATACAGTG---CCTATTACAGCCGTTTATGAT 2842
61 V R L T N G Q E V T A Y I P G E G H N L Q E H S V V L I R G 90
2843 ACAAAA---CAAGGATCATCCGATATTCAATATAATTTAGAAAAAATAATTAAAGATTTGAAA---ATAGCTATACAGGAAAAATCTTTG 2926
91 G R V K D L P G V K Y H I V R G V F D L Q G V Q N R R K G R 120
2927 AATAAAGAACAAGTAAAAAGCATTATTGATGAT 2959
121 S L Y G T K K P K D L 131
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 21734
Protein: lcl|KC353356.1_cdsid_AGH24261.1 [gene=rps12] [protein=ribosomal protein S12] [protein_id=AGH24261.1] [location=15356..15751] @ 0
DNA length: 786 Protein length: 131
1 Nt shifts: 12 ||| 2 Nt shifts: 0
Score: 67 Length-adjusted: 0.51
21735 TTACATATAAAATGGTACTTTTTCTCAATATATTAAAAATATCGTCAAACAAAA---CAATTCCGA------TCATCACA-CCTCATTTT 21814
1 M P T K N Q L L K I S K K R K S D K A E R R E F S K A P A L 30
21815 GAAGGAGT-CCTTTTAAATATGT-ACTTGCATGGA-GTAGGAACAGTTAAACCAAG-AAACCTAATTCTGCAAA-CGCAAAATTACAAAA 21899
31 N S C P Q K R G V C T R V F I A S P K K P N S A K R K V A R 60
21900 GTTTG-TTAACTAATGGTGTTAT-TTAATTGCTTATATACCAGGATTTGGTAT-AGATTACAAAAAAACAATGAAGTAATGATAGG-GGA 21985
61 V R L T N G Q E V T A Y I P G E G H N L Q E H S V V L I R G 90
21986 GGTCGTGTACCTGATTA-CCAGGTGTTCGATATCATGTATGCGTTTAAAAAAAGATTTTATGTGGTTAGAAAAATTGATAGATATCAACG 22074
91 G R V K D L P G V K Y H I V R G V F D L Q G V Q N - R R K G 119
22075 TGTAGTAAATATGGTGTGGA-AATCCTAATCGTGTC 22109
120 R S L Y G T K K P K D L 131
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45773
Protein: lcl|KC353356.1_cdsid_AGH24261.1 [gene=rps12] [protein=ribosomal protein S12] [protein_id=AGH24261.1] [location=15356..15751] @ 0
DNA length: 786 Protein length: 131
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
45774 TTTTTGTGTTATTTTGAAATTTTTCCT---AACAAGATCGAAACCATTATGCAGAATTTTATATTTGATATGTCT---AGCCCACCTTTT 45857
1 M P T K N Q L L K I S K K R K S D K A E R R E F S K A P A L 30
45858 AATATGAAAGTGGATGGGCGTTTAATAATCAATGAACTTATCAAAAATGCTAGGCAACTCAAGAATCCTGAAAAAAAATATCTATTTTCT 45947
31 N S C P Q K R G V C T R V F I A S P K K P N S A K R K V A R 60
45948 GTATATATTCTTGTTAGCGGTAAAAGAGCTAACGTGTTACCTTCCGAAGCGAAAATATTAATATCTGATGCCCTGGACGAATTAAACGAT 46037
61 V R L T N G Q E V T A Y I P G E G H N L Q E H S V V L I R G 90
46038 TCAAAATTGGCTAAGATTGGGGATAAGAAATATACTATACTAAAAAGAGTCCTTAAACGTTTTGAAAGTATACGTACTCGTTTATCG--- 46124
91 G R V K D L P G V K Y H I V R G V F D - L Q G V Q N R R K G 119
46125 AAAGTTTTAAACGGCTCCGAATTTTCGGATACCATA 46160
120 R S L Y G T K K P K D L 131
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62425
Protein: lcl|KC353356.1_cdsid_AGH24261.1 [gene=rps12] [protein=ribosomal protein S12] [protein_id=AGH24261.1] [location=15356..15751] @ 0
DNA length: 768 Protein length: 131
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
62426 ATTATTGTTAATAGTACACCATTATATTTAACAAAAGATATTTCTCCTGAAATAAAGGCCAGCATGGAATTTAATAAAAATTTAACAGGA 62515
1 M P T K N Q L L K I S K K R K S D K A E R R E F S K A P A L 30
62516 AATTCGTGTCCTGATATTACTTTAAAAGAACATCCTTATGATTTTAAAGATTCAAAGGATATAAAATGGAATAAAAATCAGATTTATTTG 62605
31 N S C P Q K R G V C T R V F I A S P K K P N S A K R K V A R 60
62606 GTTGATAATACTAGTTTTAATGAA---CAGGCTATAATAATG---TTAAATCAT---TTGGAAAAATCTTTGATTAATCAATTAACTGTT 62686
61 V R L T N G Q E V T A Y I P G E G H N L Q E H S V V L I R G 90
62687 AATCATTTGATGTCTAGTGAATGTGTTCTTTAT------ACTAAAGATATTTTAGCAATTATGAAAAATAAAAGTACGAGCTCTGCTCAG 62770
91 G R V K D L P G V K Y H I V R G V F D L Q G V Q N R R K G R 120
62771 GATATCTTT---GAAAAAATACAAAAGCATCTT 62800
121 S L Y G T K K P K D L 131
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 387
Protein: lcl|KC353356.1_cdsid_AGH24262.1 [gene=rps7] [protein=ribosomal protein S7] [protein_id=AGH24262.1] [location=15793..16272] @ 0
DNA length: 954 Protein length: 159
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.06
388 TTAAAAACAACTAAAGAAAAAATGATA---AATATATGTATCATAACGTTATATATATTTACTTTTGTTATAGGTATATTTTATCTTAGA 474
1 M S R K K R V Y K Q N I S G L K E P V F K D N V L L K F I N 30
475 TATATAAATATAACA---AAAAAA---GTAGACTTAAAAATTTATTATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAAGAAGAA 558
31 C L M F D G K K S I A E K L V Y D C F R N I R K E T S I D P 60
559 ATT---ATTTTAAATGTGGTAATAATAATAACTTTTATAATAATTTATATTTTTATAATATATAAATTTACTCAATATTTTAAATTACAA 645
61 I L I F N Q A I K N T T P I V Q V K S I R I A G S N Y Q V P 90
646 GTA---ATTAAAAGACATCTTTAC---TTAATAGGAATACCA---TTAAATAATAATTGGTATTCAACCGTTCATCGAAAGTATTTATGG 726
91 I E I P L H R Q T M L S I K W I I E S A R K R S E K T M I E 120
727 CCTTTAGCAAATTCTTTTCTTAAAATAAGTATAAAACATAAAATTGAGTTATTGTATAAAAAATATTATTTTGATAAAAAGCCTCATAAA 816
121 R L S K E F I D A S - K N I G K A I D K K I S M H K M A E S 149
817 CCAAGACCTGATAATTTTTTTTCTTTATCT 846
150 N R A Y A H Y R W Q 159
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2255
Protein: lcl|KC353356.1_cdsid_AGH24262.1 [gene=rps7] [protein=ribosomal protein S7] [protein_id=AGH24262.1] [location=15793..16272] @ 0
DNA length: 954 Protein length: 159
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
2256 TTAAGTAATTTAGAAAATGTG---GATTCTAACTGTTAT---TATGATAATCCTGATATCTTAGATGGGATTGTCCA-AGATAT------ 2332
1 M S R K K R V Y K Q N I S G L K E P V F K D N V L L K F I N 30
2333 TGTAACACGTTTTACAAAACAATGATCTTATATCAGAAAATTCAACATACTAATTTTTTTACAAATAAAATTTCTTATAGT---AATTTT 2419
31 C L M F D G K K S I A E K L V Y D C F R N I R K E T S I D P 60
2420 ATCCGTTTTTATCCTGGCAATTTAGGGAAAACACAACCAAAA---TCTATTAAAGAAATGCCTGAGAGTAAAACACCTCAAGAAATTACA 2506
61 I L I F N Q A I K N T T P I V Q V K S I R I A G S N Y Q V P 90
2507 AAATATTTTCCA---TCAGGTACAACATTACAAGATCTTGAAGAAGTTGCACAAGATGTAATGTATCCCAAAGAAATGTCTAGTATTCCT 2593
91 I E I P L H R Q T M L S I K W I I E S A R K R S E K T M I E 120
2594 ACTGAAAAAAGTGAAGAACCAATTAAATCTGCAGCAGTT---AAAGAAGAAGAAAAAAAAATA---ATAGAAAAACTTATAGAAGCTGAT 2677
121 R L S K E F I D A S K N I G K A I D K K I S M H K M A E S N 150
2678 ACTATAGCGGAAAAAATACAAGGTAAT 2704
151 R A Y A H Y R W Q 159
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2770
Protein: lcl|KC353356.1_cdsid_AGH24262.1 [gene=rps7] [protein=ribosomal protein S7] [protein_id=AGH24262.1] [location=15793..16272] @ 0
DNA length: 954 Protein length: 159
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.01
2771 AAAAATGTTGAATTTAAATTCCATAAACCTGAGTCTGATAATTATACAGTGCCTATTACAGCCGTTTATGATACAAAACAAGGATCATCC 2860
1 M S R K K R V Y K Q N I S G L K E P V F K D N V L L K F I N 30
2861 GATATTCAATATAATTTAGAAAAAATAATTAAAGATTTGAAAATAGCTATACAGGAAAAATCTTTGAATAAAGAACAAGTAAAAAGCATT 2950
31 C L M F D G K K S I A E K L V Y D C F R N I R K E T S I D P 60
2951 ATTGATGATATTCGTAAAAATTATGTTACTAAAGGGGTTAGTATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAGTCTTATGATTTT 3040
61 I - L I F N Q A I K N T T P I V Q V K S I R I A G S N Y Q V 89
3041 CAATATGAA---CCTTTA---AAACAA---ATTTGTAAAATTAAAAAAGATATT---ATTATAAATAAAGAACAAGAAAAAATTGTTATA 3118
90 P I E I P L H R Q T M L S I K W I I E S A R K R S E K T M I 119
3119 GATTCTAAATCATCT---TATGAAGAAAAATTGAAAAATTTAGAAGAAAAAATGTCAATAGCTCTTAAAAATATAAATAATTTTCTTGAA 3205
120 E R L S K E F I D A S K N I G K A I D K K I - S M H K M A E 148
3206 AAAAATAAAGATTATACTAAAGAATTTCTTGAA 3238
149 S N R A Y A H Y R W Q 159
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3197
Protein: lcl|KC353356.1_cdsid_AGH24262.1 [gene=rps7] [protein=ribosomal protein S7] [protein_id=AGH24262.1] [location=15793..16272] @ 0
DNA length: 954 Protein length: 159
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.12
3198 TTCTTGAAAAAAATAAAGATTATACTAAAGAATTTC------TTGAAGCAAAAGAATTACAAGAATGGTATGATTATT---TTCAG-AAT 3277
1 M S R K K R V Y K Q N I S G L K E P V F K D N V L L K F I N 30
3278 AGAGGAGCATTAAAA---AAATTATCAAAACAAGAAAAAGAAGTTTATGATAAATTATTAGAAATAAAAAATAAATATTTACCTAGCGAA 3364
31 C L M F D G K K S I A E K L V Y D C F R N I R K E T S I D P 60
3365 AAAGATTTTCAAGAAAAAAATAGTAGTTATTTGACACCTCTGAAAAAAAATAGTGCTTTACCTATTAATTTACAAAATGAAAAA---TCA 3451
61 I L I F N Q A I K N T T P I V Q V K S I R I A G S N Y Q V P 90
3452 GCTAAATGTTACTTGCCAAAAGATTATGTTATGGAAATAACA---AATATAGAACGTGCTCTTGAAATTTTAAATAAATCACAAACATTA 3538
91 I E I P L H R Q T M L S I K W I I E S A R K R S E K T M I E 120
3539 TCTATTAATGATCTTAAATTGTTATCCATTAATTCTTCGGCAGTTACTATAGATACAGAAGGTGTTATTAAAATATCACAAGAGGCGTAT 3628
121 R L S K E F I D A S K N I G K A I D K K I S M H K M A E S N 150
3629 CAGTCTTTTACTAAATATAAAGATAGC 3655
151 R A Y A H Y R W Q 159
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3868
Protein: lcl|KC353356.1_cdsid_AGH24262.1 [gene=rps7] [protein=ribosomal protein S7] [protein_id=AGH24262.1] [location=15793..16272] @ 0
DNA length: 954 Protein length: 159
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
3869 TCTAATATTAAAATTGATAGTTAT---CAAGTTACTAATGAGGATTCTAATAAACAAAATAAAGATCAAATGTTTCGTATTTTTCCTACT 3955
1 M S R K K R V Y K Q N I S G L K E P V F K D N V L L K F I N 30
3956 TTTTTAATTGTAGAT---GAGAAA---ATTGAGCCCTTAATAGTAAATCTTGAAATGACGTTGTATTTTTATGGCAAAAATACAGATAAT 4039
31 C L M F D G K K S I A E K L V Y D C F R N I R K E T S I D P 60
4040 AAAAGTATTGTAGAAGAAATCATA------TTTACGCAATATGATTTAACAAAAAATATATGG---TCCGAAAATTATTACCAATATCCT 4120
61 I L I F N Q A I K N T T P I V Q V K S I R I A G S N Y Q V P 90
4121 TTTAATGTGGATCAAGAATTTTTACGTCAACTTTCTATTATTTTTTATAGTAATAAATTACAAGAACTTCAACAGGATTATAAAGAACTA 4210
91 I E I P L H R Q T M L S I K W I I E S A R K - R S E - K T M 118
4211 CAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAAGACTATAATAAGGAAATAGATCGCCTTAATGAATTAAAAACAAATTATTTG 4300
119 I E R L S K E F I D A S K N I G K A I D K K I S M H K M A E 148
4301 AAAGATAGAAAATATAAACAATATTTTAATTCA 4333
149 S N R A Y A H Y R W Q 159
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4780
Protein: lcl|KC353356.1_cdsid_AGH24262.1 [gene=rps7] [protein=ribosomal protein S7] [protein_id=AGH24262.1] [location=15793..16272] @ 0
DNA length: 954 Protein length: 159
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
4781 CTATCTTAATTTAAAAGATATTATAGAGATATTGTATGCACCTTT---GAAAAC---TATAGA---TCATG-CTATTAAATATAATAAAT 4860
1 M S R K K R V Y K Q N I S G L K E P V F K D N V L L K F I N 30
4861 ATATTAAACCTTAT-TATTACAAATTTGTGAGT---AAATTT---TATAAC---TTTACTGAAACA---AAAAATATAAATGATGACCAG 4937
31 C L M F D G K K S I A E K L V Y D C F R N I R K E T S I D P 60
4938 ATACAAGTATTTGTCTTTTTTATGCAGATATTTCCTAGAATTATCTTAGTT---TCTATTTTAATGATAGATACATTTTATTTTAATAAA 5024
61 I L I F N Q A I K N T T P I V Q V K S I R I A G S N Y Q V P 90
5025 TTAGAAATA---TTTTATAAATTTGTATTATTGGGCTTATTTCCTTTTATTTTTAGATATTTTAAATATTCTTTAAAAGATGTTTATGAA 5111
91 I E I P L H R Q T M L S I K W I I E S A R K R S E K T M I E 120
5112 CACTGGATTGTAGAA---TTGGAAAATAAATATTCGTTAGTAAGAATTTATGAAGTTGGATATAAATTTGATGATTCTCGTAAAAAAAAT 5198
121 R L S K E F I D A S K N I G K A I D K K I S M H K M A E S N 150
5199 ACAAAAGCTATTTATCATGATGAAGAA 5225
151 R A Y A H Y R W Q 159
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4780
Protein: lcl|KC353356.1_cdsid_AGH24262.1 [gene=rps7] [protein=ribosomal protein S7] [protein_id=AGH24262.1] [location=15793..16272] @ 0
DNA length: 954 Protein length: 159
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
4781 CTATCTTAATTTAAAAGATATTATAGAGATATTGTATGCACCTTT---GAAAAC---TATAGA---TCATG-CTATTAAATATAATAAAT 4860
1 M S R K K R V Y K Q N I S G L K E P V F K D N V L L K F I N 30
4861 ATATTAAACCTTAT-TATTACAAATTTGTGAGT---AAATTT---TATAAC---TTTACTGAAACA---AAAAATATAAATGATGACCAG 4937
31 C L M F D G K K S I A E K L V Y D C F R N I R K E T S I D P 60
4938 ATACAAGTATTTGTCTTTTTTATGCAGATATTTCCTAGAATTATCTTAGTT---TCTATTTTAATGATAGATACATTTTATTTTAATAAA 5024
61 I L I F N Q A I K N T T P I V Q V K S I R I A G S N Y Q V P 90
5025 TTAGAAATA---TTTTATAAATTTGTATTATTGGGCTTATTTCCTTTTATTTTTAGATATTTTAAATATTCTTTAAAAGATGTTTATGAA 5111
91 I E I P L H R Q T M L S I K W I I E S A R K R S E K T M I E 120
5112 CACTGGATTGTAGAA---TTGGAAAATAAATATTCGTTAGTAAGAATTTATGAAGTTGGATATAAATTTGATGATTCTCGTAAAAAAAAT 5198
121 R L S K E F I D A S K N I G K A I D K K I S M H K M A E S N 150
5199 ACAAAAGCTATTTATCATGATGAAGAA 5225
151 R A Y A H Y R W Q 159
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10924
Protein: lcl|KC353356.1_cdsid_AGH24262.1 [gene=rps7] [protein=ribosomal protein S7] [protein_id=AGH24262.1] [location=15793..16272] @ 0
DNA length: 954 Protein length: 159
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
10925 TTGTCAAGGAATACA---TTATATTTT------ATAACCGAT---AATATACATATATTCAATTTTGAACTTATTCAAGAATTTAGCCAA 11002
1 M S R K K R V Y K Q N I S G L K E P V F K D N V L L K F I N 30
11003 AAAGAAAAATACGACTTTTTCATAAAATATTTAAATTATACCCTGTATATGGAACGAGAATTTCATTCTATACGTACATCAACCTTTTTA 11092
31 C L M F D - G K K S I A E K L V Y D - C F R N I R K E T S I 58
11093 AATACAATAATGTCTGATAAAAACTATTATGAAAATTTATTATTATCCCTAGATATTAATACAATTAAAGTATTGGCAAAAGAATTACTT 11182
59 D P I L I F N Q A I K N T T P I V Q V K S I R I A G S N Y Q 88
11183 ACAATTGCTATTATAGTAGAAGATCGTTTTATAGAATTAGATGAAAAGCTAATGATTGAAACTATATCAGAATTGATAGAAGAACTCAGA 11272
89 V P I E I P L H R Q T M L S I K W I I E S A R K R S E K T M 118
11273 CAAGAGGAATTACAAAGA---ATTATAGATAAAAATCCA---ATTACTAAA---ATATATAACAAAATAGGAGAATTC---TTA---AAT 11347
119 I E R L S K E F I D A S K N I G K A I D K K I S M H K M A E 148
11348 AGTCAAAAA---TTTGAATGGATATGATGGGTT 11377
149 S N R A Y A H Y R W Q 159
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15736
Protein: lcl|KC353356.1_cdsid_AGH24262.1 [gene=rps7] [protein=ribosomal protein S7] [protein_id=AGH24262.1] [location=15793..16272] @ 0
DNA length: 954 Protein length: 159
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.10
15737 CTTTGTAAAAAAATATTTAATTCTGAAATTACTATTTCATGTTTAAAGTCATATTTAAAAAAAATGGCTTTTAAATATGAAGTGACTCCT 15826
1 M S R K K R V Y K Q N I S G L K E P V F K D N V L L K F I N 30
15827 TGTGCAATTTCCGAT---ACTTATTCTTTTCCTGATTCTTTTATGCAAGAATGT---AAATGTATA---------ATATCA---GATAAA 15898
31 C L M F D G K K S I A E K L V Y D C F R N I R K E T S I D P 60
15899 GTTTTAATG---AAGATATCAAAGAAAAAGAAAACT---ATTGTATTTTTAAAAAAACTATTAATAGTTTTTTATGATTATGCTATAAAT 15982
61 I L I F N Q A I K N T T P I V Q V K S I R I A G S N Y Q V P 90
15983 ---AAAATAAAT---AAAAAAGAACCTTGGATT---TTAGAAAATATCATGGATCGGATTATAATTAAA---CAAAGTACAATGGCAGAT 16060
91 I E I P L H R Q T M L S I K W I I E S A R K R S E K T M I E 120
16061 CTTTACGGAATGACAATAGGAGGTAGTCGTAAATCTATTTCAAATGCGCTCATTGAAAAAATAATTGAAAAAGGAAAATTTGATATAAAC 16150
121 R L S K E F I D A S K N I G K A I D K K I S M H K M A E S N 150
16151 CTTTCTTATATTCACATATTTTCTGAT 16177
151 R A Y A H Y R W Q 159
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46034
Protein: lcl|KC353356.1_cdsid_AGH24262.1 [gene=rps7] [protein=ribosomal protein S7] [protein_id=AGH24262.1] [location=15793..16272] @ 0
DNA length: 954 Protein length: 159
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.06
46035 GATTCAAAATTGGCTAAGATTGGGGATAAGAAATATACTATACTAAAAAGA---GTCCTTAAACGTTTTGAAAGTATACGTACTCGTTTA 46121
1 M S R K K R V Y K Q N I S G L K E P V F K D N V L L K F I N 30
46122 TCGAAAGTTTTAAACGGCTCCGAA---TTTTCGGATACCATAGCCAATGACACA---GGTCATGTTAAGAAA---TCTATTATGAATTTA 46202
31 C L M F D G K K S I A E K L V Y D C F R N I R K E T S I D P 60
46203 ATACTTCGCAGCAAAGATCAAAAACCATTTACATCATTTAATATAAATATTCTAACTATAGCAAAACGTATCAAGGATTATGTTATTAAT 46292
61 I L I F N Q A I K N T T P I V Q V K S I R I A G S N Y Q V P 90
46293 GATAATGATATTCTTATGAATACGGATAAAGATAAATTGGCTCAAGCTATTGAAAGTGCT---AAACTTATTGATTTATCTAAACCTAAA 46379
91 I E I P L H R Q T M L S I K W I I E S A R K R S E K T M I E 120
46380 AAA---TCTAAAAATAAAATAGATCCTTCTAAAGCTGTTGTTAATACTACTAGTAAAAAGAAAAATAAAAGGGGTTCCACCCCTGCTAGC 46466
121 R L S K E F I D A S K N I G K A I D K K I S M H K M A E S N 150
46467 ATAGCTAAAGCTGTCGCTTCTGATAAT 46493
151 R A Y A H Y R W Q 159
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61759
Protein: lcl|KC353356.1_cdsid_AGH24262.1 [gene=rps7] [protein=ribosomal protein S7] [protein_id=AGH24262.1] [location=15793..16272] @ 0
DNA length: 954 Protein length: 159
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
61760 TTAATACGTGAAATTTTTTATTTTCATGAATTAATTACATATTTAAAAATAATACCTATAAAATTTGATAAAATTTCTTTAATTTTTGAT 61849
1 M S R K K R V Y K Q N I S G L K - E P V F K D N V L L K F I 29
61850 AATTTACAAAATATTAATCTTATTAATTATGATTTTAATAAAAAAAACGAAAATATGATT------TTATATCAATATGCTATAATTTTC 61933
30 N C L M F D G K K S I A E K L V Y D C F R N I R K E T S I D 59
61934 CCT---ATGATTTATAAGGGAAATACAAAAAATTTTATTTGTAAAAAAATTACCATAAAAAATTTTATCCGTTTTTATCCAGGTCATGTG 62020
60 P I L I F N Q A I K N - T T P I V Q V K S - I R I A G S N Y 87
62021 AATAAAATTATCAATATTATTAATACTTCTCTAAAAAAAGTATCACCACAAGCACTTATTGAACAAAATCGAATAGAAGCTAATAAAATG 62110
88 Q V P I E I P L H R Q T M L S I K W I I E S A R K R S E K T 117
62111 ATTATTTATGCATTCTGCGAACATTTTAAAAATGATAACTTATCTGATTTATTAGATGATCACAAAATTATTAATCGTATGCATGATTTT 62200
118 M I E R L S K E F I D A S K N I G K A I D K K I S - M H K M 146
62201 ATTCATAAACAACCAACTCTTAGTTCAAGAGCATTTCAA 62239
147 A E S N R A Y A H Y R W Q 159
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 40052
Protein: lcl|KC353356.1_cdsid_AGH24262.1 [gene=rps7] [protein=ribosomal protein S7] [protein_id=AGH24262.1] [location=15793..16272] @ 0
DNA length: 954 Protein length: 159
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
40053 AAAGATAAGAAGAGGCA-ATATCATATAAAAATTTCAGCTATAGTTTGCCAGATAACCTATTTTTTTGGATTTTATTAGATCATTATATA 40141
1 M S R K K R V Y K Q N I S - G L K E P V F K D N V L L K F I 29
40142 AATTGTCTAAGA---GGTTATAATAAGTCCTTTAGTTGTTGACAAATATATAATTTATTTTGTGCAAGATTTGATAAAGTTTATTATTTC 40228
30 N C L M F D G K K S I A E K L V Y D C F - R N I R K E T S I 58
40229 GATAATACGGAAATTAG-AACGGTTCTTTTAAAAATATTAATGATTTTATTACTGAGTATTGCTATCATATATTTAAAGAAATTTTAACT 40317
59 D P I L I F N Q A I K N T T P I V Q V K S I R I A G S N Y Q 88
40318 CTCGGATATAACGTTTCGCTCGTAATTGTGGAGAACATAACTAAATCCCCAAATATATCCTTATTTCGTAAAAGA---CGTAAAGT-ATT 40403
89 V P I E I P L H R Q T M L S I K W I I E S A R K R S E K T M 118
40404 ATACATAAATTATTACTGGTATTTCACAGAAAGAATTACCAGTCTTATAGTGGCATTCATGATACTATCATAGCAGAAAAACGGCTGTCA 40493
119 I E R L S K E F I D A S K N I G K A I - D K K I S M H K M A 147
40494 TTTACCAGGATGAGTTACGTAATCCAGAAATATAGG 40529
148 E S N R A Y A H Y R W Q 159
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45488
Protein: lcl|KC353356.1_cdsid_AGH24262.1 [gene=rps7] [protein=ribosomal protein S7] [protein_id=AGH24262.1] [location=15793..16272] @ 0
DNA length: 954 Protein length: 159
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
45489 TATACAGAAAATAGATATTTTTTTTCAGGATTCTTGAGTTGCCTAGCATTT---TTGATAAGTTCATTGATTATTAAACGCCCATCCACT 45575
1 M S R K K R V Y K Q N I S G L K E P V F K D N V L L K F I N 30
45576 TTCATATTAAAAGGTGGGCT-AGACATATCAAATATAAAATTCTGCATAATGGTTTCGATCTTGTTAGGAAAAATTTCAAAATAACACAA 45664
31 C L M F D G K K S I A E K L V Y D C F R N I R K E T S I D P 60
45665 AAATTATTATTTCAAGAAATCTTGTATAATGAAACAAAGTTTTTT---GCCAAA---TTAAAAGCTGCTAATCCTACACTGGATATCAGA 45748
61 I L I F N Q A I K N T T P I V Q V K S I R I A G S N Y Q V P 90
45749 ---AAATTTAAAATAATTCCTTTAACGATTTTGAAACGTTATTATCTTTCTGATAAATATAATTTTAAAGAAACAAAGTACTTAGCTCAA 45835
91 I E I P L H R Q T M L S I K W I I E S A R K R S E K T M I E 120
45836 CAACAGCAAGCATTTTGTTTGTTCGAGTATTACAAAAACGGTTATATTATTATTCATTCTCATTTCTTTATGAACCCTGTACTTTCTTTT 45925
121 R L S K - E F I D A S K N I G K A I D K K I S M H K M A E S 149
45926 ACCTATACGTTCGGG---ATAAAGGAAAAT 45952
150 N R A Y A H Y R W Q 159
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 58888
Protein: lcl|KC353356.1_cdsid_AGH24264.1 [gene=nad1] [protein=NADH dehydrogenase subunit 1] [protein_id=AGH24264.1] [location=18615..19616] @ 0
DNA length: 1998 Protein length: 333
1 Nt shifts: 29 ||| 2 Nt shifts: 0
Score: 541 Length-adjusted: 1.62
58889 ATACATGACAGTTTTACTGTTTTAATAAAATTTTTAATTATTATTGA-CCAACATTATTAATAGTAGCTACTTTAACCTTACTAGAACGT 58977
1 M F D V L I I L G K I L G L V L P L L I A V A Y L T L T E R 30
58978 AAAATATG-GCCGCGATTAA-ATACGTCGAGGACCTAATGTTATAGGT---TT-GGAATATTGCAACCCTTGCT-GATGGTTTAAAACTT 59060
31 K V I A A M Q Q R K G P N V V G I F G L L Q P L A D G L K L 60
59061 TTAATAAAAGAATT-ATTATACCTTTAAAAGGAAATAA-ATGGTATTTTTATTATCACCAGTACTCTT-TTTATATTAAGTTTTGCTAGT 59147
61 L L K E T I I P S R A N T A I F I L A P I L T F M L S L V S 90
59148 GG-TCTGTAATACA-TTTGAAGAGCATTATGTT---GCTCTCCTA---ATCTTATATATTAGTATTTCTTGCTTTTCCTCATTATCTGTT 59229
91 W A V I P I D E G M V I A D L N I G L L Y I L S I S S L G V 120
59230 TATGGTATTTA-TTAGGTGGATGGGCTTG-AATTCTCGCTATGCTTTTTA-GGTGCTTTACGATA-GCATCTCAGATGATTTCTTATGAA 59315
121 Y G I I T S G W S S N S K Y A F L G S L R S A A Q M V S Y E 150
59316 CTTGT-TTAAGCCTATTAATTTTATTAGTTGTATTTTG-GCTCAATCTTTAATTTTGTTG---ATATTGTAATGCTCAAACAATACTTGG 59400
151 V S I G L I I I T V L M C A G S L N L T Q I V R C Q E S M W 180
59401 TTTATAATACT-TTAGCACCCTT-TGCTTAGTTTATTTTGTGGCTATACTAGT-GAAACTAATCGTACTCCTTTTGATTG-CCTGAAGCT 59486
181 Y V I P L F P L F V M F F I S I L A E T N R S P F D L P E A 210
59487 GAAGT-GAACTTGTTGCAGGTTATAGTGTGAA-TATTCTAGTGG-TCCTTTGCTTTTTATTTTATTGCAGAATATGTAATTTAATATTTG 59573
211 E A E L V A G Y N V E Y S G M G F A L F F L G E Y A N M I L 240
59574 GTCGTT---TACACAACTATTCTTTTTCTTGGAGGATGGTT----CCA---AGTTTCTTA---TTTCC-TTTTTAAATGGTTTTATTTTA 59649
241 M C S M C T I L F L G G W L A P L N I I P F T L I P G S I W 270
59650 TTTGC-TTTAAAATAATGTTTATCCTAGCTTTATTTTGTTG-ATTAGAGCAGCACTCCG-AGATATCGTTGGGACCAATTAATGACATTA 59736
271 F G I K V V L L L F T F I W V R A T F P R Y R Y D Q L M R L 300
59737 GC-TGGAGAGCCTTTTTACCAATGTTTTGTTAGGGTGTTTTTTTGTTTATGCTTTTTTTAATTTTTATACTAATTTTTTACTTTAAT--- 59822
301 G W K I F L P - F S L G W V V F V A G I L V A F D W V P N A 329
59823 AATTATAAATTA 59834
330 T F W L 333
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 58941
Protein: lcl|KC353356.1_cdsid_AGH24264.1 [gene=nad1] [protein=NADH dehydrogenase subunit 1] [protein_id=AGH24264.1] [location=18615..19616] @ 0
DNA length: 1998 Protein length: 333
1 Nt shifts: 28 ||| 2 Nt shifts: 0
Score: 357 Length-adjusted: 1.07
58942 ------------TTA------TTA------ATA---------GTA---------------GCTACT------TTAACCTTACTAGAACGT 58977
1 M F D V L I I L G K I L G L V L P L L I A V A Y L T L T E R 30
58978 AAAATATG-GCCGCGATTAA-ATACGTCGAGGACCTAATGTTATAGGT---TT-GGAATATTGCAACCCTTGCT-GATGGTTTAAAACTT 59060
31 K V I A A M Q Q R K G P N V V G I F G L L Q P L A D G L K L 60
59061 TTAATAAAAGAATT-ATTATACCTTTAAAAGGAAATAA-ATGGTATTTTTATTATCACCAGTACTCTT-TTTATATTAAGTTTTGCTAGT 59147
61 L L K E T I I P S R A N T A I F I L A P I L T F M L S L V S 90
59148 GG-TCTGTAATACA-TTTGAAGAGCATTATGTT---GCTCTCCTA---ATCTTATATATTAGTATTTCTTGCTTTTCCTCATTATCTGTT 59229
91 W A V I P I D E G M V I A D L N I G L L Y I L S I S S L G V 120
59230 TATGGTATTTA-TTAGGTGGATGGGCTTG-AATTCTCGCTATGCTTTTTA-GGTGCTTTACGATA-GCATCTCAGATGATTTCTTATGAA 59315
121 Y G I I T S G W S S N S K Y A F L G S L R S A A Q M V S Y E 150
59316 CTTGT-TTAAGCCTATTAATTTTATTAGTTGTATTTTG-GCTCAATCTTTAATTTTGTTG---ATATTGTAATGCTCAAACAATACTTGG 59400
151 V S I G L I I I T V L M C A G S L N L T Q I V R C Q E S M W 180
59401 TTTATAATACT-TTAGCACCCTT-TGCTTAGTTTATTTTGTGGCTATACTAGT-GAAACTAATCGTACTCCTTTTGATTG-CCTGAAGCT 59486
181 Y V I P L F P L F V M F F I S I L A E T N R S P F D L P E A 210
59487 GAAGT-GAACTTGTTGCAGGTTATAGTGTGAA-TATTCTAGTGG-TCCTTTGCTTTTTATTTTATTGCAGAATATGTAATTTAATATTTG 59573
211 E A E L V A G Y N V E Y S G M G F A L F F L G E Y A N M I L 240
59574 GTCGTT---TACACAACTATTCTTTTTCTTGGAGGATGGTT----CCA---AGTTTCTTA---TTTCC-TTTTTAAATGGTTTTATTTTA 59649
241 M C S M C T I L F L G G W L A P L N I I P F T L I P G S I W 270
59650 TTTGC-TTTAAAATAATGTTTATCCTAGCTTTATTTTGTTG-ATTAGAGCAGCACTCCG-AGATATCGTTGGGACCAATTAATGACATTA 59736
271 F G I K V V L L L F T F I W V R A T F P R Y R Y D Q L M R L 300
59737 GC-TGGAGAGCCTTTTTACCAATGTTTTGTTAGGGTGTTTTTTTGTTTATGCTTTTTTTAATTTTTATACTAATTTTTTACTTTAAT--- 59822
301 G W K I F L P - F S L G W V V F V A G I L V A F D W V P N A 329
59823 AATTATAAATTA 59834
330 T F W L 333
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1620
Protein: lcl|KC353356.1_cdsid_AGH24265.1 [gene=cox11] [protein=heme biosynthesis protein] [protein_id=AGH24265.1] [location=19636..20184] @ 0
DNA length: 1092 Protein length: 182
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.07
1621 CTTCTCAAGATGAAGCCTCATATTTCCCTTCTGATGATATTAATG---ATA---TG-ATACCAGTACAAATGCAAGATATACCTGTTAAA 1703
1 M L K N R K S I A I L I A A M S I T M I G F S Y G S V P L Y 30
1704 TCCAAAGAGCCTAAAATAGAA---TATCCTAGAAGACCTAATATT---GATCTTAAACGTGAAACAATTATCCCTAGATTTGAAATTGAA 1787
31 R I F C Q V T G F G G T T Q I A D L E S D I L Q I K N E - E 59
1788 ACTGAAACAATACCACCTACAATAGTAAATCCACCGGATGTTATTAATAATGATTTACCTTTTGAA---GAACCTGTTGAGGAGCCTATT 1874
60 Q E N R I I T V H F N G D V - S D T M P W K F H P I Q Q E I 88
1875 GAAATAAAAGTA---GAATTTTTTAATGCTTATACGGATCTTATGAATATAGAAGATGTAGATAGTGTAATTTCTCCAAGTTTTGAAGGC 1961
89 K V M V G E T A L A F Y S A E N P T D - K S I I G I S T Y N 117
1962 TCTCGTATTTATAGTGACGATGCAATTTTTCAGTTACATTTAGATATTACTGAATTTGTTACACAAAAAATAAGGGTTTCAACAGAA--- 2048
118 V N P Q Q A G I Y F N - K I Q C F C F E E Q R L K P H E S I 146
2049 GATATATCTGTAACAATT---ATACGAAATACAGTCCATGAATATTTTATAAAAAGTAATTTAAATAGTAATCTTACACCGTCTGATTTG 2135
147 D M P V F F F I D P T I L D D P K M S D I D S I T L S Y T F 176
2136 CAAAACACTAATCATTTA 2153
177 F N V E D F 182
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2632
Protein: lcl|KC353356.1_cdsid_AGH24265.1 [gene=cox11] [protein=heme biosynthesis protein] [protein_id=AGH24265.1] [location=19636..20184] @ 0
DNA length: 1092 Protein length: 182
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.03
2633 AAAGAAGAAGAAAAAAAAATAATAGAAAAACTTATAGAAGCTGATACTATAGCGGAAAAAATACAAGGTAATTCTCATATTTTTAATCCA 2722
1 M L K N R K S I A I L I A A M S I T - M I - G F S Y G S V P 28
2723 TTAAGATTAGTTTATAACACCAGTAGTAAAGTATGGAATTACCTAAAA---AAAAATGTTGAATTTAAATTCCATAAACCTGAGTCTGAT 2809
29 L Y R I F C Q V T G F G G T T Q I A D L E S D I L Q I K N E 58
2810 AATTATACAGTGCCTATTACAGCCGTTTATGATACAAAACAAGGATCATCCGATATTCAATATAATTTAGAAAAAATAATTAAAGATTTG 2899
59 E Q E N R I I T V H F N G D V S D T M P W K F H P I Q Q E I 88
2900 AAAATAGCTATACAGGAAAAATCTTTGAATAAAGAACAAGTAAAAAGCATTATTGATGATATTCGTAAAAATTATGTTACTAAAGGGGTT 2989
89 K V M V G E T A L A F Y S A E N P T D K S I I G I S T Y N V 118
2990 AGTATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAGTCTTATGATTTTCAATATGAACCTTTAAAACAAATTTGTAAAATTAAAAAA 3079
119 N P Q Q A G I Y F N K I Q C F C F E E Q R L K P H E S I D M 148
3080 GATATTATTATAAATAAAGAACAAGAAAAAATTGTTATAGATTCTAAATCATCTTATGAAGA-AAAATTGAA---AAATTTAGAAGAAAA 3165
149 P V F F F I D - P T I L D D P K M S D I D S I T L S Y T F F 177
3166 AATGTCAATAGCTCT 3180
178 N V E D F 182
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3556
Protein: lcl|KC353356.1_cdsid_AGH24265.1 [gene=cox11] [protein=heme biosynthesis protein] [protein_id=AGH24265.1] [location=19636..20184] @ 0
DNA length: 1092 Protein length: 182
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.03
3557 TTGTTATCCATTAATTCTTCG---GCAGTTACTATAGATACAGAAGGTGTT------ATTAAAATATCACAAGAGGCGTATCAGTCTTTT 3637
1 M L K N R K S I A I L I A A M S I T M I G F S Y G S V P L Y 30
3638 ACTAAATATAAAGATAGCTTAGGATTTAAATATTTATTAGAATATCCAAAAACAGAAGAAATATTATTACGTATAAAAGAAAGGAATTTT 3727
31 R I F C Q V T G F G G T T Q I A D L E S D I L Q I K N E E Q 60
3728 TTTATTGCTAAAAATATGGATTCTAATCCTAATGGAATTATTGCT---TTAGCTCACCTATCACATAATACATTAATTATTCCAAACCAA 3814
61 E - N R I I T V H F N G D V S D T M P W K F H P I Q Q E I K 89
3815 ACCGAGAAAAATTTATATGTTAGGGTAGGGCTTGTTACTAGTACTAAAAGTGAT---TCTAATATTAAAATTGATAGTTATCAAGTTACT 3901
90 V M V G E T A L A F Y S A E N P T D K S I I G I S T Y N V N 119
3902 AATGAGGATTCTAATAAACAA---AATAAAGATCAAATGTTTCGTATTTTTCCTACTTTTTTAATTGTAGATGAGAAAATTGAG---CCC 3985
120 P Q Q A G I Y F N K I Q C F C F E E Q R L K P H E S I D M P 149
3986 TTAATAGTAAATCTTGAAATGACGTTGTATTTTTATGGCAAAAATACAGATAATAAAAGTATT---GTAGAAGAAATCATATTTACGCAA 4072
150 V F F F I D P T I L D D P K M S D I D S I T L S Y T F F N V 179
4073 TATGATTTA 4081
180 E D F 182
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7161
Protein: lcl|KC353356.1_cdsid_AGH24265.1 [gene=cox11] [protein=heme biosynthesis protein] [protein_id=AGH24265.1] [location=19636..20184] @ 0
DNA length: 1092 Protein length: 182
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.09
7162 TTGATAAAAATAACAAAATCTCCTGCAGTTATTATTGAAACAGAAAGTGATGGTCATATACGTATTGGTAATAAAGATAATGATTTAATA 7251
1 M L K N R K S I A I L I A A M S I T M I G F S Y G S V P L Y 30
7252 ---TTTACGAAACACGGGCGAGCGTATTTAGAATTACAGCCAAAAAGTCAAATTTTTATAAATCCTTTAGAAATCACCAAAGAAAATATT 7338
31 R I F C Q V T G F G G T T Q I A D L E S D I L Q I K N E E Q 60
7339 ACTCTTGATGATTTAAAT---AATTTTTGTATTATTGTACCAAAAAATTATGAGGATGATCTTATAAAAGCCTCGCCACATATGATAGCA 7425
61 E N R I I T V H F N G D V S D T M P W K F H P I Q Q E I K V 90
7426 GCTTATGATCCTACTAATACTCATTTGTACGCATTTTCTACATTTACAAGCGAAAAAGTT---GGTCTAAAAGTAAGTGATGAGCAATTT 7512
91 M V G E T A L A F Y S A E N P T D K S I I G I S T Y N V N P 120
7513 AAAAAATTTCAAATGAAAAAACAAGGTATA---GTATTTACTAAAGAAGAAGAA---TTAAAACCTCATAATAATAAATCCCAACAATTA 7596
121 Q Q A G I Y F N K I Q C F C F E E Q R L K P H E S I D M P V 150
7597 CGTTTTTTCAAAAATATACAAGTATTAGATAAAAATGAG---GCTTATGTAGCCAAGTTTGATCAAGACTAT---TTTTTTACAATG--- 7677
151 F F F I D P T I L D D P K M S D I D S I T L S Y T F F N V E 180
7678 AGTCTT 7683
181 D F 182
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15398
Protein: lcl|KC353356.1_cdsid_AGH24265.1 [gene=cox11] [protein=heme biosynthesis protein] [protein_id=AGH24265.1] [location=19636..20184] @ 0
DNA length: 1092 Protein length: 182
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.03
15399 ATGCTAAAAAACCT-GGGGAGATATTAAATATTCTTAGTATTTTATATTATAAAGAAAAAAATGCTTTATATAACAATAGTGAACTTGTT 15487
1 M L K N R K S I A I L I A A M S I T M I G F S Y G S V P L Y 30
15488 ---ATATTTTTAGATAGTACA---ATGAGCGGGTCTCAACATTTAGCAACAATATTTAAAAATAAATTAGCAGCTAAAAATAGTTGTTTA 15571
31 R I F C Q V T G F G G T T Q I A D L E S D I L Q I K N E E Q 60
15572 ATTTCTACAGATGAAACT---AAATTTGACTTAAATATTAATTGCCTTGAAAAATTTCAGCTATTT---ATTACAAAAGCATTATCTGAC 15655
61 E N R I I T V H F N G D V S D T M P W K F H P I Q Q E I K V 90
15656 GAAACTTCTAAGTAT---TTAGCTAAATTTGACATA---AACCGTAATGATTTATATGCATTGAATTTAGCAGAAATTTCT---AATTTA 15736
91 M V G E T A L A F Y S A E N P T D K S I I G I S T Y N V N P 120
15737 CTTTGTAAAAAAATATTTAATTCTGAAATTACTATTTCATGTTTAAAGTCATATTTAAAAAAAATGGCTTTTAAATATGAAGTGACTCCT 15826
121 Q Q A G I Y F N K I Q C F C F E E Q R L K P H E S I D M P V 150
15827 TGTGCAATTTCCGATACTTATTCTTTTCCTGATTCTTTTATGCAAGAATGTAAATGTATA---ATATCAGATAA-AGTTTTAAT---GAA 15909
151 F F F I D P T I L D D P K M S D I D S I T L S Y T F F N V E 180
15910 GATATC 15915
181 D F 182
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46631
Protein: lcl|KC353356.1_cdsid_AGH24265.1 [gene=cox11] [protein=heme biosynthesis protein] [protein_id=AGH24265.1] [location=19636..20184] @ 0
DNA length: 1092 Protein length: 182
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.01
46632 CTTTTAAAAAGCGTACTT---ATATTTATATTTATTGCTGGCTTATATTATTTTTTTACTAAGTATACA---GGAGCAACACCAGCGATT 46715
1 M L K N R K S I A I L I A A M S I T M I G F S Y G S V P L Y 30
46716 CCAGTA---ACTCAAATGCCTTCAATACTCAATCCTACTCATATTGCATATATTCAACAATTAGAAGCTTTTCAAGCAGCAACTTATGTT 46802
31 R I F C Q V T G F G G T T Q I A D L E S - D I L Q I K N E E 59
46803 ---GAAGGGAAATTTTCAGTGTTAGAGGGTATTGAATATATACATAATAATCAACCA---CGATTAAATAGGGTTGAG---GACACCCAT 46883
60 Q E N R I I T V H F N G D V S D T M P W K F H P I Q Q E I K 89
46884 AGTTTACAAGGTGAAAATACT---TCT---TATCATCTTTTTATAGAAGAATACAAGTCTTTTATT---CTTGGC---------TTAAAT 46955
90 V M V G E T A L A F Y S A E N P T D K S I I G I S T Y N V N 119
46956 CCAGAAAAACAAGGTATTGCTATTAATTATTTACAAACCATTATAACTTATCAACACAGTATGCTTTTAGATACAACACCATCTCCGCAT 47045
120 P Q Q A G I Y F N K I Q C F C F E E Q R L K P H E S I D M P 149
47046 GATATTGAAGTCATATTTGAAAGTTTAACAACCAAACCTTTAACTACACAAACATCTACTATCAAAATAATTATGCTTCCCGTAATTATT 47135
150 V F F F I D P T I L D D P K M S D I D S I T L S Y T F F N V 179
47136 GTTTTATTT 47144
180 E D F 182
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 55525
Protein: lcl|KC353356.1_cdsid_AGH24266.1 [gene=cox3] [protein=cytochrome c oxidase subunit 3] [protein_id=AGH24266.1] [location=20285..21088] @ 0
DNA length: 1602 Protein length: 267
1 Nt shifts: 24 ||| 2 Nt shifts: 0
Score: 512 Length-adjusted: 1.92
55526 TTT---TATAATATGAATAATAAACATCA-TATCATTTAGTAAT-CCATCCCCATGGCCTATATTGTT-TCAGCAGCTTTATTAGGATT- 55608
1 M S Q T F V K K H P Y H I V D P S P W P L L V S L G T L C S 30
55609 AACTATGGAGGTGTTTCTTATTTTCACTCTTT-AACAATGGTATTATTTATTAACTTCTTCTTTTATTTACTTGCTATTTTAGAGGTTTT 55697
31 T F G G V M Y F H S Y S N G G Y I V S L G L I T I L F S L F 60
55698 TGGTGG---AGAGATTA-ATTCGTGAAGGTACTAT-TTACATAATCATACTAAAGAAGTCTTTTA-GGTTTACGTTA-GGTTTTATTTTA 55780
61 V W C R D I V R E G T F Q G Q H T L A V Q N G L R I G M I L 90
55781 TTTATTGTTTCTGAAGTATG-TTTTTCTTTTCTTTTTTCTGGGCTAT-TTTCATAGTAGTTA-AGCCCTAATATTGAAAT-GGTAGTCAA 55866
91 F I I S E V M F F V S F F W A F F H S S L S P A I E I G A V 120
55867 TGGCCTCCTTTTGCTTTAGAAGTATA-GGTTTA---GCTTTACCTGTTGTTAATACGTT-ATTCTTTTAACTTCTGGAGCACA-ATTACT 55950
121 W P P Q G I E V L N A W D V P F L N T V I L L M S G A T V T 150
55951 GTAGCCCATTA-GCTATCTTACGTAATAA-AAAACAAATTGCTATGAATCTTTAATAGCTACATT-GTTTTAGCTTTAGTTTTTACTGTA 56037
151 W S H H A M I H G N R T Q S I L G L V F T I I L A V N F T G 180
56038 TTCAAATGTATGAGTATGTCA---TGCTCCTTTTCTATTTCTGATGGAATTTATGGTTCAGT-TTTTATATGTTAACAGGTTTTCATGGA 56123
181 L Q V M E Y R E A T F S I A D G I Y G S T F Y M A T G F H G 210
56124 ATTCATGTTCTTATGGTACTATCTTTATTGTGT---TCAATTTGTTCGTCTTACAAAGATCATTTATTATCTAA-AGTCATTTAGGATTT 56209
211 F H V I V G T C M L T V C L I R E Y K Y H F T T T H H F G F 240
56210 GAAGCTTG-GCTTGGTATTGGCATTTCGTTGATGTGTT-TGGTTACTTTTATTTGTAAT-GTGTATGCTTATGGAAGTAAT 56287
241 E A S A W Y W H F V D V V W L F L F T T I Y W W G G N 267
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 633
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
634 TTTAAATTACAAGTAATTAAAAGACATCTTTACTTAATAGGAATACCA---TTAAATAATAATTGGTATTCAACCGTTCATCGAAAGTAT 720
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
721 TTATGGCCTTTAGCAAATTCTTTTCTTAAAATAAGTATAAAACATAAAATTGAG---TTA---TTGTATAAAAAATATTATTTTGATAAA 804
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
805 AAGCCTCATAAACCAAGACCTGATAATTTTTTTTCTTTATCTGAAGAGGCAAAAATTTTATTTTTTAAAAATAATCCTACATTACCTGAA 894
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
895 TTA---CTTTTTCATAAATACAAGAAAATGTCTATTTTCATAGATAATATTTTAACAAAAGGTCATTATTTTATATTA 969
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1574
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 61 Length-adjusted: 0.53
1575 ATTATTTTGGTGAAATATAGTTTAGATACTTCAGCTGATTATCAACCTTCTCAAGATGAAGCCTCATATTTCCCTTCTGATGATATTAAT 1664
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
1665 GATATGATACCAGTACAAATG---CAAGATATACCTGTTAAATCCAAAGAGCCTAAAATAGAATATCCTAGAAGACCTAATATTGATCTT 1751
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
1752 AAA---CGTGAAACAATTATCCCTAGATTTGAAATTGAAACTGAAACAATACCACCTACAATAGTAAATCCACCGGATGTTATTAATAAT 1838
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
1839 GATTTACCTTTTGAAGAACCTGTTGAGGAGCCTATTGAAATAAAAGTAGAATTTTTTAATGCTTATACGGATCTTATG 1916
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2015
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.13
2016 TTTGTTACACAAAAAATAAGGGTTTCAACAGAAGATATATCTGTAACAATTATACGAAATACAGTCCATGAATATTTTATAAAAAGTAAT 2105
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
2106 TTAAATAGTAATCTTACACCGTCTGATTTGCAAAACACTAATCATTTAATTAATTTATTACTTAAGGAACTAATTGTCAATAGTTTTTTT 2195
31 S F K N L K I I G P I S L P T K I K - K I T V L R S P H I D 59
2196 GCCGCTGACAACGAAAGTTTTATAATGAAACAAATTGCAACATCCCTAATAGTTGAAGTTTTAAGT---AATTTA---GAAAATGTGGAT 2279
60 K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D 89
2280 TCTAACTGTTATTATGATAATCCTGATATCTTAGATGGGATTGTCCAAGATATTGTAAC-ACGTTTTACAAAACAATGATCTTA 2362
90 F I E Q F K N - N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2738
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.09
2739 ACACCAGTAGTAAAGTATGGAATTACCTAAAAAAAAATGTTGAATTTAAATTCCATAAACCTGAGTCTGATAATTATACAGTGCCTATTA 2828
1 M F L T K C S L H - L K S F D L D V L K N S C I L I T N K K 29
2829 CAGCCGTTTATGAT-ACAAAACAA---GGATCATCCGATATTCAATATAATTTAGAAAAAATAATTAAAGATTTGAAAATAGCTATACAG 2914
30 N S F K N L K I I G P I S L P T K I K K I T V L R S P H I D 59
2915 GAAAAATCTTTGAATAAAGAACAAGTAAAAAGCATTATTGATGATATTCGTAAAAATTATGTTACTAAAGGGGTTAGTATAGAGAATGCT 3004
60 K K S R E Q F E M R T Y A K T I Q I E T L T K N - S N E - I 87
3005 AATGAACTTTTAACTCTTTGGAAGTCTTATGATTTTCAATATGAACCTTTAAAACAAATTTGTAAAATTAAAAAAGATATTATTATA 3091
88 I D F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2954
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.13
2955 ATGATATTCGTAAAAATTATGTTA---CTAAAGGGGTTAGT-ATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAGTCTTATGATTTT 3040
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
3041 CAATATGAACCTTTAAAACAAATTTGTAAAATTAAAAAAGATATTATTATAAATAAA---GAACAAGAAAAAATTGTT---ATAGATTCT 3124
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
3125 AAATCATCTTATGAAGAAAAATTGAAAAATTTAGAAGAAAAAATGTCAATA---GCTCTT---AAAAATATAAATAATTTTCTTGAAAAA 3208
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
3209 AATAAAGATTATACTAAAGAATTTCTTGAAGCAAAAGAATTACAAGAATGGTATGATTATTTTCAGAATAGAGGAGCA 3286
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3367
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.18
3368 GATTTTCAAGAAAAAAATAGTAGTTATTTGACACCTCTGAAAAAAAATAGTGCTTTACCTATTAATTTACAAAATGAAAAATCAGCTAAA 3457
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
3458 TGTTACTTGCCAAAAGATTATGTTATGGAAATAACAAATATAGAACGTGCTCTTGAAATT---TTAAATAAATCACAAACATTATCTATT 3544
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
3545 AATGATCTTAAATTGTTATCCATTAATTCTTCGGCAGTTACTATAGATACAGAAGGTGTTATTAAAATATCACAAGAGGCGTATCAGTCT 3634
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
3635 TTTACTAAATATAAAGATAGCTTA------GGATTTAAATATTTATTAGAATATCCAAAAACAGAAGAAATATTATTA 3706
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3634
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.19
3635 TTTACTAAATATAAAGATAGCTTAGGATTTAAA---TATTTATTAGAATATCCAAAAACAGAAGAAATATTATTACGTATAAAAGAAAGG 3721
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
3722 AATTTTTTTATTGCTAAAAATATGGAT------TCTAATCCTAATGGAATTATTGCTTTAGCTCACCTA---TCA---CATAATACATTA 3799
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
3800 ATTATTCCAAACCAAACCGAGAAAAATTTATATGTTAGGGTAGGGCTTGTTACTAGTACTAAAAGTGATTCTAATATTAAAATTGATAGT 3889
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
3890 TAT---CAAGTTACTAATGAGGATTCTAATAAACAAAATAAAGATCAAATGTTTCGTATTTTTCCTACTTTTTTAATT 3964
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4103
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.21
4104 ATTATTACCAATATCCTTTTAATGTGGATCAAGAATTTTTACGTCAACTTTCTATTATTTTTTATAGTAATAAATTACAAGAACTTCAAC 4193
1 M F L T K C S L H L K S F D L D V L K N S C I L - I T N K K 29
4194 AGGATTATAAAGAACTACAAGATA---AATTATATTCACTTCTTATTAAAAGTCACGAAGACTATAATAAGGAAATA-GATCGCCTTAAT 4279
30 N S F K N L K I I G P I S L P T K I K K I T V L R S P H I D 59
4280 GAATTAAAAACAAATTATTTGAAAGATAGAAAATAT---AAACAATAT---TTTAATTCATTAACAGATGAAGAACAAAAATTAGTTTCT 4363
60 K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D 89
4364 CATATAAAAATTTTTCAAGATAAGATTAAA---GATGATAATATACAAAATGAAAAAAAACAAAAGAAAGAACTTATTAAT 4441
90 F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4291
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.14
4292 AATTATTTG---AAAGATAGAAAATATAAACAATATTTTAAT---TCATTAACAGATGAAGAACAAAAATTAGTTTCTCATATAAAAATT 4375
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
4376 ---TTTCAAGATAAGATTAAAGATGATAATATACAAAATGAAAAAAAACAAAAGAAAGAACTTATTAATCAACTTTTGGAAAAAAATAAA 4462
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
4463 AAAGGAAAAGATAAAGAAGAAGGAACAGAAATTTTAACTGCAAAACAAAAAAAGGAGAAATATCTAAAGGATAAACAAAATATAAATAAT 4552
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
4553 ATCGATGAA---AAGAATAATTGATTATTTTTTAATAATATATTATTATTTATTATTATTTATAGGTCTAATAATGACATC 4630
91 I E Q F K N N - L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4763
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.22
4764 AAGGCTTCAGGAGATAACTATCTTAATTTAAAAGATATT---ATAGAGATATTGTATGCACCTTTGAAAACTATAGATCATGCTATTAAA 4850
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
4851 TATAATAAATATATTAAACCTTATTAT---TACAAATTTGTGAGTAAATTTTATAACTTTACTGAAACAAAAAATATAAATGATGACCAG 4937
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
4938 ATACAAGTATTTGTCTTTTTTATGCAGATATTTCCTAGAATTATCTTAGTTTCTATTTTAATGATAGATACA---TTTTATTTTAATAAA 5024
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
5025 TTAGAAATATTTTATAAATTTGTATTATTGGGCTTA---TTTCCTTTTATTTTTAGATATTTTAAATATTCTTTAAAA 5099
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5831
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 34 Length-adjusted: 0.29
5832 CAGATGAAAAAAATCATCAGGAAGTCTTTGAAAATTTTAGAA---AAATACTTAAAGAAGGTTTGTTTAAT-ATATTAGAAAAGTTGGAT 5917
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
5918 TGTCTTGAAGATTCACAAACAATGAAGGAAATA---GTAGAAACATTTATGGATAATTTA---ATGCTGGAAGAATTATATATTAAATAC 6001
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
6002 CTTGCAAAAGATGAAAAAGATTATGAAGGTTTTATGAAAGAAATTCAA------TCATTATTAAAGGATTATCTTCTAAGACTTCAAGAA 6085
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
6086 ATGAAAAAATTCAAAGAAAATATGAATAAATTCACCTTACGAATCACTGCAATATATGTAATTAGTAGT---ATTTTGTTA 6163
91 I E Q F K N N L - F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6163
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.10
6164 CCTCATTTACCTATAACGTCATTATTTTTAAACAGCATATATATATATCTATTTGCTAACAAATATTTAAAAGAATTTGAAGAACAAAGT 6253
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
6254 TCGGATAAGAATTTTGAAGTAATTTTTCCTTTAATTTTG---AATTATATT------TTAACAACATTTTATGAT---GAAATACAAAAA 6331
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
6332 AAACA-AAAGAAAGATGATTAATAAGAAAACAC---AAATTCAAAAAAATAATTATTTAATAACGAGTAAGTATG---ATGCGAACTTTA 6414
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
6415 ATACTTAATAAAAAAATAAATAGCTTTCTGTATCTTTGTAAGCCGATAGTCATTCAAATATCTAAGCGTTTTTATCCC 6492
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6604
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.14
6605 ATCATAATAAATATATTACTGATACAAAAATACAAACTAGACATAGAGGTTTA-AGCAATAGAGAATTACAAGGTATTCGATCTCCATTG 6693
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
6694 AGTAGTAAAAAGTTTAAGGAGGTAAATAATATTGATATGAAAAATCCTTTTCAAAACTCACAAAAAGTGTCAGAACCTTTTTCACCTCTT 6783
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
6784 ACAAGTATAACTAAAACCTGTAAAACAACATTTAAATCCTTTATTAAAAAAGATTCATTATCAATTGCCTCTAACCAAATA---CCATTG 6870
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
6871 CCTGAGAGTATA---AATAACACAATAAGTCACGAAAATCAAAATATAAATCTTAGT---GATCCTACATTTCCAATA 6942
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6648
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.08
6649 AGAGGTTTAAGCAATAGAGAATTACAAGGTATTCGATCTCCATTGAGTAGTAAAAAGTTTAAGGAGGTAAATAATATTGATATGAAAAAT 6738
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
6739 CCTTTTCAAAACTCACAAAAAGTGTCAGAACCTTTTTCACCTCTTACAAGTATAACTAAAACCTGTAAAACAACATTTAAATCCTTTATT 6828
31 S F K N - L K I I G P I S L P T K I K K I T V L R S P H I D 59
6829 AAAAAAGATTCATTATCAATTGCCTCTAACCAAATACCATTGCCTGAGAGTATAAATAACACAATAAGTCACGAAAATCAAAATATAAAT 6918
60 K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D 89
6919 CTTAGTGATCCTACATTTCCAATACCTCCATTGCATTTTGGTATTACTAATGATACCCAACATACCCCGTCTACTACTGTTTTAAAT 7005
90 F I E - Q F K - N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7299
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.14
7300 ATTTTTATAAATCCTTTAGAAATCACCAAAGAAAATATTACTCTTGATGATTTAAATAATTTTTGTATTATTGTACCAAAAAATTATGAG 7389
1 M F L T K C S L H L K S F D L D V L K N S C I L I - T N K K 29
7390 GATGATCTTATAAAAGCCTCGCCACATATGATAGCAGCTTATGATCCTACTAATACTCATTTGTACGCATTTTCTACATTTACAAGCGAA 7479
30 N S F - K - N L K I I G P I S - L P T K I K K I T V L R S P 56
7480 AAAGTTGGTCTAAAAGTAAGTGATGAGCAATTTAAA---AAATTTCAAATGAAAAAACAAGGTATA---GTATTTACTAAAGAA---GAA 7560
57 H I D - K K S R E Q F E M R T Y A K T I Q I E T L T K N S N 85
7561 GAATTAAAACCTCATAATAATAAATCCCAACAATTACGTTTTTTCAAA---AATATACAAGTATTA---GATAAAAATGAGGCTTATGTA 7644
86 E I I D F I E Q F K N N L F F G L N I K V V F T Y S K D L L 115
7645 GCC 7647
116 L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7347
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.16
7348 GATTTAAATAATTTTTGTATTATTGTACCAAAAAATTATGAGGATGATCTTATAAAAGCCTCGCCACATATGATAGCAGCTTAT---GAT 7434
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
7435 CCT---ACTAATACTCATTTGTACGCA---TTTTCTACATTTACAAGC---GAAAAAGTTGGT---CTAAAAGTAAGT------GATGAG 7506
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
7507 CAATTTAAA---AAATTTCAAATGAAAAAACAAGGTATAGTATTTACTAAAGAAGAAGAATTAAAACCTCATAATAATAAATCCCAACAA 7593
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
7594 TTACGTTTTTTCAAAAATATACAAGTATTAGATAAAAATGAGGCTTATGTAGCCAAGTTTGATCAAGACTATTTTTTT 7671
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8012
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.15
8013 TATATAAGAAATAGATTACCACGAGAAATACCT---TTTGATTTAACATTATTACGTTTAATAATGTTAATTATAATATGTAGTAGTTAT 8099
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
8100 ATATATATAATTTATAGGCTTATTAAACCT---AAAGTACCACCTCAATTTATA---CTTAATGTTTTGGTATCTATTATAAATACTGTA 8183
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
8184 AAATCTTTTGACAATTATACG---AAACAATTT---AATCTTATTTCC---AATACCTATATAAAAATATTTACCTATATAGCAAATAAA 8264
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
8265 ATTAATTATTAT---AATGTCATTTTATGGGAAAAAATCTTACTTATTATAAATACTGTACCGCATATCATTTTACTT 8339
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8012
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.15
8013 TATATAAGAAATAGATTACCACGAGAAATACCT---TTTGATTTAACATTATTACGTTTAATAATGTTAATTATAATATGTAGTAGTTAT 8099
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
8100 ATATATATAATTTATAGGCTTATTAAACCT---AAAGTACCACCTCAATTTATA---CTTAATGTTTTGGTATCTATTATAAATACTGTA 8183
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
8184 AAATCTTTTGACAATTATACG---AAACAATTT---AATCTTATTTCC---AATACCTATATAAAAATATTTACCTATATAGCAAATAAA 8264
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
8265 ATTAATTATTAT---AATGTCATTTTATGGGAAAAAATCTTACTTATTATAAATACTGTACCGCATATCATTTTACTT 8339
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8669
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
8670 CATTTTTATTATATTATACGTCCAACAATAGAATGGTATAAT---AATTTATTTAAAGAATATAATGTTACCTGGAAATCTTGTGGAGAT 8756
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
8757 ---ATAAAAAACACCATTATCGAAAAGGATCTTAATTTAATAATTAGATTAAAAAGTATT---ATAACAACACATGAGATAATTACTAAA 8840
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
8841 TGGACAAATGTACAACAAAATATAAAAAATATTAGAATTATAATATATATAGGATATTTAATATGCTGGGCTTATATATTATACGTAAGT 8930
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
8931 TTATCAAATTTTAAAGATTTTTATATGTTATCATGTATAATTGAAGTGATAAAAACTCATCTTCTACAAGGTAAAGTC 9008
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9063
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.07
9064 AAAAAGATAATTAATATTATGATA---ATATGGGTTTTACTTACAGATAGAGTAAAAGAAAGGAATATGCAA---AATTACAGAAAATCT 9147
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
9148 TCTTATTCAAAA---AAACTACTTTATACAATATACATTCCA---AAAATATCAGGAGTTACTCTACCCGAATATCCTTTAAAAGATGTT 9231
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D - 59
9232 CAAAAAGCTAATTTTATCCAGTTCTTTAATAGTATAGTTAAAAATGACCCAATATGGGATAATTTATGTCAAACATATAATAAAGTAAAT 9321
60 K K S R E - Q F E M R T Y A K T I Q I E T L T K N S N E I - 87
9322 TCTTCATTTTTTTATCAAAAAATTAAAGATGCTTATATTAACTTAACTTTACAAACAGCTCAT---TATAAAGAACAAATAGCTATT 9405
88 I D F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9400
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
9401 CTATTTATTTATCATTT-ATCTTAAAATTGATTGAAATGCACCCTCAAATACCTATTAAAGATATGTGCTTAAAAGCAGTCAATTATGAT 9489
1 M F L T K C S L H L K S F D L D V - L K N S C I L I T N K K 29
9490 GTTTATTTT---GACATAAATGAGCAGGATAGTTTTTATGTT---ACA---ATAAAACAG---AATCCTTAT---AGTCCTATTGAAATT 9564
30 N S F K N L K I I G P I S L P T K I K K I T V L R S P H I D 59
9565 AGTCTTCAACATGATAATATTTGTTTGCACACTTTC---CATTTATTACTTATTGAAGAAATATTTCTACAA---AAC---TTTCAAGAT 9645
60 K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D 89
9646 AATATTGAACCATTTTCTGATCTCTTACTTAAAGATGAAAATGAAAGTAATAAATTT---TATAAACAAAAAATGTTATTA 9723
90 F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10077
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
10078 TTGTGTATTAATGTATGTTTTTTACATTTATAACTTAGTTATAAAATACAAATTTTACAAAATTTATTTATTTATGTGCCAATTTGA--- 10164
1 M F L T K C S L H L - K S F D L D V L K N S C I L I T N K K 29
10165 AACTTTTATAAAAATATGTGACATTTTTACAGGTGGATATCGATTCT-ATGAACTTTTATACGATAACTTACATGATTTT-ATTTATATT 10252
30 N S F K N L - K I I G P I S L P T K I K K I T V L R S P H I 58
10253 AAACTAAAACCAATTAATAAAATAAAC---TCTTCTTATTTACAAGTGCTAATGATA---ATACTATGC---AAT------AAGATCTTG 10327
59 D K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I 88
10328 ---TACATATATGCTTATATAAAAAATATCTTCTAT---ATT---TTACGAGCA---TTT---TTTCCTGAAATTTTATTATTT 10396
89 D F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10390
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
10391 TTATTTATAAGTTTGATATCT---GATTTAAATAATAGAGAAATAAAAACATTTTATTAT---ATCTTAGCTATATACCCATTAATGACA 10474
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
10475 TCTTATAGGACCATTAAAGAAATTCTAGGAGACTATGATATGTTAAATATAAATGATAAATTAACTACATATTTTTATGAAGATAAAATA 10564
31 S F K N L K - I I G P I S L P T K I K K I T V - L R S P H I 58
10565 CACGATAAATTGAGAAAAACAATAAGTGAATATGAACGTACTAGAATATTAATACAAAGTATGACTCTTTATTATAAATATGATAAACAG 10654
59 D K K S R E Q F - E M R T Y A K T I Q I E T L - T K N S N E 86
10655 ATAAGAGAATATATATTAAGAGATTTCAAAAGA---ATATATCAGCCATATAGTATGCGTTTAATCTTTTTAGG-AATATTAATATTATA 10740
87 I I D F I - E Q F K N N L F F G L N I K V V F T Y S K D L L 115
10741 TTA 10743
116 L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10918
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.16
10919 ATATATTTGTCAAGGAATACATTATATTTTATAACCGATAATATACATATATTCAATTTTGAACTTATTCAAGAATTTAGCCAAAAAGAA 11008
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
11009 AAATACGACTTTTTCATAAAATATTTAAATTATACCCTGTATATGGAACGAGAATTTCATTCTATACGTACATCAACCTTTTTAAATACA 11098
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
11099 ATAATGTCTGATAAAAACTATTATGAAAATTTATTATTATCCCTAGATATTAATACAATTAAAGTATTGGCAAAAGAATTACTTACA--- 11185
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
11186 ATTGCTATTATAGTAGAAGATCGTTTTATAGAATTAGATGAAAAGCTAATGATTGAAACTATATCAGAATTGATAGAA 11263
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11459
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
11460 ATATTCTTATTAAAA---TACTTG---ATT---TTCTTCATAAAACGATGTTTAGAATGAGAATTAATGTTTTTCCCTTTTAAAAATTTA 11540
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
11541 AATATGTTAAACATTCTAATTTTA---ATTATAGTGTTATTTTTAACAATTAAAATAATATCTTTTATTAAAAATAAAAGGTATCCAAAA 11627
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
11628 TTATCTGTGAATGAATATAAA---AAATCT---CCTGAATTATTA---TTAGAATATTTAAATAAATATTATGTAACTAACATT---TAT 11705
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
11706 TATAGTATTTTTAAAAT-AATTATATATGTTTTTTAAATTA-AGTATTATTTTT---TATTTACGTTATTTATATTTA 11778
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12111
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
12112 ACTTTTGTTACAAAATTATCACTAAATTTATTTATATATCAA---AACACTTTTATGATACATTTATTTTTTAAATGTAGTAAGAAAATG 12198
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
12199 ---TTTCGTTTGTTATATATTCATTTACATTTTGATGCCTTTGGCAAATATTTACATATTTTATTATTAAGTATAGTTATTATTTATGAG 12285
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
12286 ATAATTCATACTAATATG---TATTATACTTATTATATGCTTTTT---ATTACTTACATAATTAATGTAATATATAAATATTATATTTTT 12369
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
12370 ---GAGAAAAAAAAAGATTTTATGTTTGATGGCTTGCTTAATAAAAAT---TTT---TATAATGTACAATATTTTATA 12438
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12219
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
12220 TTACATTTTGATGCCTTTGGCAAATATTTACATATTTTATTATTAAGTATAGTTATTATTTATGAGATAATTCATACTAATATGTATTAT 12309
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
12310 ACTTATTATATGCTTTTTATTACTTACATAATTAATGTAATATATAAATATTATATTTTTGAGAAAAAAAAAGATTTTATGTTTGATGGC 12399
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
12400 TTGCTTAATAAAAATTTTTATAATGTACAATATTTTATATTTGCTAATAACAAAAGT---ACTTTAAACATGAAAACCAATATAGATTAT 12486
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
12487 TTA---TATTTTATGGAAAAATTAAAAGAAGAAACTACTATTAAATATATTTTAAATGATTTTGAACAAGTACCAGAA 12561
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12600
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.14
12601 TTTAGTATAATACTAATATTACTTTTTATGACAATTTTTCTTTATGATGTTATTAGATATTCTATAATAATAAAAATACTTAATTACAAT 12690
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
12691 ATATATTCTTTTTTTATTCTATTGCCATTAATTTTTATATTATATTCAGCAACTAAAATTTTTACTTTG---TCT---AATACA---GCT 12771
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
12772 GAAATT---GATGATTTTACAGAATATGTCTTTAATAAAAA-ATTCAATATTATTTCTTGGATTTTAATATCAATTCATTATTTATATTT 12857
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
12858 TTAATAATATTACAACCAAAATTTATTTTT---ATGGAAACCGAAATTTTATTTAATCTACCATATAGTATAGTAACT 12932
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13180
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.04
13181 CAGAAGTTGTACAAGAATTTTCTTTATTGCATCAGTTAT---ATTAT-TTTATGCGAAATAGTATTGTAATATTAAGTGTTATCCAAACT 13266
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
13267 GTAGTATCTTTTGTACAAAAGATTAATTTTATCCTTAAAATTAATCAAGTAGAAGGTATT---TATCTTACTGTAAAAATTATTTATGAA 13353
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
13354 AAAGGTTTGCTTAATAAGATGACTGAAACACAATTAAAAACATTATTAGA-TATCATTTGGAAAAAAATAACAAGGAAATGATCTTATAT 13442
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
13443 ---CAAAAAATAAAAATCATATGTATCTTTATAAAAAAAAATTACTATAAGATAAACATAATCAATGATTTTATACCA 13517
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13668
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.09
13669 TTAGATAAAGAAGCATGCGAAAAGGCTTTTAAAATAATAACAACGATATTACAAGAAGATGAAAAAAATTTAATTAAGAAAAAACAAACC 13758
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
13759 ACAACAAAATGGGAAAAAGTAATAAGAAAAGTAATATACGATGCAATTATGGAAGCACAAAATATAGAAAAATCATCAATATCGAATTTC 13848
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
13849 AATGGTAAAGAAATCTTT---TTT---ACATTATTAAAAGAAGATCATATAAACATGATAAATACAATAATACAAAGAAATATTGCTTAT 13932
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
13933 CTTTGATGGAAAGAGTATGGACAACATTTCAAGATAAAAATATTACTAGTATTCAA-TTCCTGAAAACATCGTATGTG 14009
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14245
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.16
14246 GAATATTTGATAAAACATAACATTTTTAAAGAATCGAGTACTGCTGGATCT---AATAATCCAAGATCTTTAAGTTTGAATGAAAAATAT 14332
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
14333 GAA---GATAGTATTACTACATCTAATCTTTTTGTTAAACCAATTTTATACCCAGAAATGTCTTATGAATTTGAATCTAAAATCGAGCGC 14419
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
14420 AAAAGTTTT---TCATTTAAACTATTAAAGAAACAAGAGCAGGCTAAAATACCAAAATTCACTTATAAAAAAACATCTAAATTAAATACA 14506
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
14507 ATATTAAAT---ACAAATGATGTTAAATATTGTATAAAT---AAACCTTTTTTTAATTTTTATATAGATTATTTAAAA 14578
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14275
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.09
14276 GAATCGAGTACTGCTGGATCTAATAATCCAAGATCTTTAAGTTTGAATGAAAAATATGAAGATAGTATTACTACATCTAATCTTTTTGTT 14365
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
14366 AAA---CCAATTTTATACCCAGAAATGTCTTATGAATTTGAATCTAAAATCGAGCGCAAAAGT---TTTTCATTTAAACTATTAAAGAAA 14449
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
14450 CAAGAGCAGGCTAAAATACCAAAATTCACTTATAAAAAAACATCTAAATTAAATACAATATTA---AATACAAATGATGTT---AAATAT 14533
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
14534 TGT------ATA---AATAAACCTTTTTTTAATTTTTATATAGATTATTTAAAAGAAATTGAACAAATACTTTTATTA 14602
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14662
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.09
14663 TATCATTTTGACATAAATAATCTT---TTATCTAATTGTAATATAAATCATGTAAAAGATTTTCTAGTATTTATAGGTAATCATAACAAA 14749
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
14750 TTATTTGATAAT---CACTTATGCAAAAAACTAATTCTT---ACAAAA---AAACAATAT------TTA---TCTAAATAT---TCAAAA 14818
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
14819 CTAATGGAAAAGGGTTTAGAAAATAAACTCCATAAAAAAACTAGTAGTATTCATACTCTTGATCAATACATTCAACATGATTTGAATAAA 14908
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
14909 AATGAACAGAGTACTAAAGACTTAGCTATT---TTAGCT---AAAGAGATA---AATGCTGCTAAA---CTACTTTTA 14974
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15839
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
15840 ATACTTATTCTTTTCCTGATTCTTTTATGCAAGAATGTAAATGTATA-ATATCAGATAAAGTTTTAATGAAGATATCAAAGAAAAAGAAA 15928
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
15929 ACTATTGTATTTTTAAAAAAACTATTAATAGTTTTTTATGATTATGCTATAAATAAAATAAATAAA---AAAGAACCTTGGATTTTAGAA 16015
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
16016 AATATCATGGATCGGATTATAATTAAACAAAGTACAATGGCAGATCTTTACGGAATGACAATAGGAGGTAGTCGTAAATCTATTTCAAAT 16105
61 K S R E Q F E M R - T Y A K T I Q I E T L T K N S N E I I D 89
16106 GCGCTCATTGAAAAAATAATTGAAAAAGGAAAATTTGATATAAACCTTTCTTATATTCACATATTTTCT---GATATATTATCT 16186
90 - F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16300
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 30 Length-adjusted: 0.26
16301 TTAACATGGTCATATAATCCAAGAAAAATGAAAATATTACGTATAAATGTTGTAAAATATTCAAAAATA------ACAAATGACCTTAAA 16384
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
16385 TCTTTGAAACGA---CGTATGATTAACGTAGCATATTTTACAGGAAAAATTGATCAAACTAAAATATATAACTCAGTTTCTGCTTTTATT 16471
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
16472 ATACATACAGAGGAAGCCCGATTAATGATGTATTTT---ATATATTCCTCACAACAACTTAATAAAGCTTTACACGAAAATTTAGGTATA 16558
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
16559 TCTTATTATTATACTCAAAATTATGATTGTTTTGGAATTAATTATAGTTTTATTGTCTTTTTGAAAATTCAGTTAAAATTA 16639
91 I E Q F K N N L - F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24430
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
24431 GCTTATTTA---AAAAACAAATTTACTTTCCTATCA---GATTTATCAATTTATCAAATTTCAATTATATCATTGGTACAATTTTATCAT 24514
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
24515 ACACATTATAATTATAAAATTATA------ATAAGTTATGGTTTT---CTT------TTA---GTGCACAATAGTTTTCATATTTTCAAA 24586
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
24587 TCGCACCGTTTAGGTTTTATTGTTATCTTCTATTATAAA---TTATATTTCTTTTTGTGCACTAGACTTGGTAGTTTATTAGTTTATTTT 24673
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
24674 ATTATTATTATCTTTTGGAATATTGTTTTT------ACTATCCCTATTGTTTGTGCAGACGATAATTTTGTATATATT 24745
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 27932
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.08
27933 ATGTTTCATATCAGAACGAGTTGG---TTAACAAATTTAGCAAGGAACAGTTATAAAACCATCTGTAATTCGTTCACAAACTTGAGCAAT 28019
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
28020 TATGGAGCAACTTTCTCTCATTTCAGTAACCCTAATCATAAAACGGTCATAACA---ATCTCC---TTCAAACCTACAGGTATTTTAAAA 28103
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
28104 TTAAATTCTTATAATTTTCATAATTATAAATTTTACGGAATCATAAGGTAT---ACCCTACCTCGAACCATAACACCAGAAAAAGCATAT 28190
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
28191 CTTTAGCAACATCTATGTAACTTTTCCTATATTTACAACGATCTTTAAATATTCGATTATCTGTTAGTAATTCTTCCA 28268
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 28341
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.10
28342 CTCCTCCTGGTCGAATGTATGCTGTATGCATTCTT-GCACCGATACACGTTCATAAAAT-TCATCAATTTTTCTCGCTCTTCAAAAG--- 28426
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
28427 CCC---AGAAAT---GGTGTTAAGGCACCAACATCCATAGCATGTGTCGTACAGCTAATAAATGATTTAAAATT-CTAGTAATTTCTAAA 28509
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
28510 AACAGACACGAATATAGCGAGCCCTTTCTGTATATCTAT---ATAAGGTATAATGCTTTAGCACATAAATCA------TTAATAAATTTT 28590
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
28591 CTA---CAGCTAAAGAATAGCATGTTCTTGTGCCATCATGA-TACATAATCAAGACA---TCAAAATAAGGAAGATTG 28661
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34911
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.20
34912 CTTAATGTAAGAAAATTAAAAATGCGATAGCTTAGGAGCTTCGATTATATTTCTGTTTATAAACTTTATTAAATTAATGCAATCTTATTT 35001
1 M F L T K C S L H - L K S F D - L D V L K N S C I L I T N K 28
35002 TATTCATTACTTAAGACT---AAGCTT---AATTTATATCAATTACAGGTAAAA---AACCTCATCTTGATTATAAGGAGAACGCTTAAC 35082
29 K N S F K N L K I I G P I S L P T K I K K I T V L R S P H I 58
35083 GGTAAAGTACTTTCTGTTTTATTTGATAAAAGAACA---ACA---TCCTTTGAAGTCAGA---TTTTATAAAGAATCAAAAAAGCTTGAT 35163
59 D K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I 88
35164 CAAATATTAGTGAAGTT-AGGTTAGAGATATATTTCAATATAACTTATAGGCTTGTGTATGCTCATAAAAAAGATCATTTGTTA 35246
89 D F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 39160
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.08
39161 TTGTATAGAATAGCAAATTCT---CATTTACGATAGATGGACAACGATAAGGTTTCAATATCCTGCTGTTGCATTATTAC-AAAAAAGGC 39246
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
39247 GTTCCAAGAGGAACAAAAATATTTGGC---CTTTACCTAAAGAATTGCGTGAGAAGGTTATATTCGTTTATGTCTTTGGGTACATCGCTT 39333
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
39334 TATAAT---GAAATCTCTAGTTTTTCTAAATTTAATAAATT-ATATATTATCCTGATTTGCT----AATAAA---TTTATTTTATCGTTT 39412
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
39413 TTCAAGATATACAGACAAACCTAAATATTATATCTA---TTAAAATATATTTTT------TCCCAAGACGTAATTATA 39481
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 41222
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.14
41223 ACATATTGTTATAAATGTATCGTTTATTTCAAAATCTTCCTACAAAGGACAACGTACAAAAGCTAATGCAATGCCATTTATAATTA---- 41308
1 M F L T K C S L H L K S F D L D V L K N S - C I L I T N K K 29
41309 AATCCTTATAAAGCTTTGCAGGTAATATTGTTTTTTATATGCATTAGAAGTGCATATAAAAAAAGAGAATTATTAAATAA-GAACGTTAT 41397
30 N S F K N L K I I - G P I S L P T K I K K I T V L R S P H I 58
41398 GATGAGTTAAAAGCTTTGAAGAGGCTAGGCTCAGAAAGAAAAAATGAAAAAAGAAGACAAAAACAAAAAAGCCGTAGATCTAGACAAGAA 41487
59 D K - K S R E Q F - E M R T Y A K T I Q I E T L T K N S N E 86
41488 TTTATTAAACAT---CAAAGACTTAAATCATA-ATTATGTTTATAATAAAGATCAATATTTTATTTATTATTAATAAATCTTTAGTATCC 41573
87 I I D F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42080
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
42081 GTAAACTTAGAAGAAAATTTAAAGAAAGATAAAACGTTATTTGGTATAAAAAAAATAAACGTCGAAAAGAAAAAGATATTT---AAGGAA 42167
1 M F L T K C S L H L K S - F D L D V L K N S C I L I T N K K 29
42168 TCATATTTTCGTGATATATTTTTCCAAAAGGACGTCCTTATATAAAAGAATATAAGG---TTTAATGCC---GATTACCCATATATTATA 42251
30 N S F K N L K I I G P I S L P T K I K K I T V L R S P H I D 59
42252 AGAAGAAAATTCAATTTTAATGAAATACGACG-AGATTTACGACGCAAGAAGTAAATAGAATGTTAACAAACAGTTTAAGTCTGATATTA 42340
60 K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D 89
42341 TTTTACACCATTATCAGAACGTTTCTTTTTTTTGGT---------CGTATTTATCTTACACATCGTGTCGAAATACTTTTA 42412
90 F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45932
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.12
45933 AAATATCTATTTTCTGTATATATTCTTGTTAGCGGTAAAAGAGCTAACGTGTTACCTTCCGAAGCGAAAATATTAATATCTGATGCCCTG 46022
1 M F L T K C S L H L K S F D L D V L - K N S C I L I T N K K 29
46023 GACGAATTAAACGATTCAAAATTGGCTAAGATTGGGGATAAGAAATATACTATACTAAAAAGAGTCCTTAAACGTTTTGAAAGTATACGT 46112
30 N S F K N L K I I G P I S L P T K I K K I T V L R S P H I D 59
46113 ACTCGTTTATCGAAAGTTTTAAACGGCTCCGAATTTTCGGATACCATAGCCAATGACACA---GGTCATGTTAAGAAATCTATTATGAAT 46199
60 K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D 89
46200 TTAATACTTCGCAGCAAAGATCAAAAACCATTTACATCATTTAATATAAATATTCTA---ACTATAGCAAAACGTATCAAGGAT 46280
90 F I E Q F K N N L - F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45939
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.11
45940 TATTTTCTGTATATATTCTTGTTAGCGGTAAAAGAGCTAACGTGT---TACCTTCCGAA-GCGAAAATATTAATATCTGATGCCCTGGAC 46025
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
46026 GAATTAAACGATTCAAAATTGGCTAAGATTGGGGATAAGAAATATACTATACTAAAAAGAGTCCTTAAACGTTTTGAAAGTATACGTACT 46115
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
46116 CGTTTATCGAAAGTTTTAAACGGCTCCGAATTTTCGGATACCATAGCCAATGACACA---GGTCATGTTAAGAAATCTATTATGAATTTA 46202
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
46203 ATACTTCGCAGCAAAGATCAAAAACCATTTACATCATTTAATATAAATATTCTA---ACTATAGCAAAACGTATCAAGGAT 46280
91 I E Q F K N N L - F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46677
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
46678 ATTTTTTTACTAAGTATACAGGAGCAACACCAGCGATTCCAGTAACTCAAATGCCTTCAATACTCAATCCTACTCATATTGCATATATTC 46767
1 M F L T K C S L H L K S F D - L D V L K N S C I L I T N K K 29
46768 AACAATTA-GAAGCTTTTCAAGCAGCAACTTATGTTGAAGGGAAATTTTCAGTGTTAGAGGGTATTGAATATATACATAATAATCAACCA 46856
30 N S F K N L K I I G P I S L P T K I K K I T V L R S P H I D 59
46857 CGATTAAATAGGGTTGAGGACACCCATAGTTTACAAGGTGAAAATACTTCTTATCATCTTTTTATAGAAGAATACAAGTCTTTTATTCTT 46946
60 K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D 89
46947 GGCTTAAATCCAGAAAAACAAGGTATTGCTATTAATTAT---TTACAAACCATTATAACTTATCAACACAGTATGCTTTTA 47024
90 F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 48147
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
48148 CTATTTCTCCTATTTTGCCCCTTGAGAGAATCGACTCTC---GTCTACAAACTGAAAATCTGATGT---CTTACCACTAGACGAAAGGGC 48231
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
48232 TACTTTGGTTCTAGTAGAATCGAACTACCGATTTAACTCATGAGGCACACGTTTTACCACTAAACTATAGAACAAAGCTTCCTTTGTCTT 48321
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
48322 ATAGTAACATAACTATATTTATATAGATGTTATTTTATTTCTGCAGAAAGATATAGT---AGAAAATCTTA-AAAGAAATACTTTCAATA 48407
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
48408 TCATTTCTATTTAAATTTCACAATTACTTTTAAGAATCTATAATAAAAATTCTTGACGGATATATAGATTTTTTATGT 48485
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61512
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.16
61513 CTTATCCTTAATGACTGCTCAATTACTAAAATGATACAATATAAACTTATGAGAATGGTGAAAACCTGCATATTAAA-GTAAATAATTTT 61601
1 M F L T K C S L - H L K S F D L D V L K N S C I L I T N K K 29
61602 AACGC-TTTATAACAACAAAATCC---GGAGAGTACTCCAAAAAAACACAAAAAATGAAAACCGATGAAAAAAAAAACCAAAAAATA--- 61684
30 N S F K N L K I I G P I S L P T K I K K I T V L R S P H I D 59
61685 AAAAACACAAAAAAAATATTTTTAAATAAAAAATTTTTTCCAATATTATTTTTTATAATAATATTAAAAATTTTA------TTAATACGT 61768
60 K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D 89
61769 GAAATTTTTTATTTT---CATGAATTAATTACATATTTAAAAATA---ATACCTATAAAATTTGATAAAATTTCTTTAATT 61843
90 F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61861
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.18
61862 ATTAATCTTATTAATTATGATTTTAATAAAAAAAACGAAAATATGATTTTATATCAATATGCTATAATTTTCCCTATGATTTATAAGGGA 61951
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
61952 AATACAAAAAATTTT---ATTTGTAAAAAAATTACCATAAAAAATTTTATCCGTTTTTATCCAGGTCATGTGAATAAAATTATCAATATT 62038
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
62039 ATTAATACTTCTCTAAAAAAAGTATCACCACAAGCA---CTTATTGAACAAAATCGAATAGAAGCTAATAAAATGATTATTTATGCATTC 62125
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
62126 TGCGAACATTTTAAAAATGATAACTTATCTGATTTATTAGATGATCACAAAATTATTAATCGTATGCATGATTTTATTCAT 62206
91 I E Q F K N - N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62107
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.11
62108 ATGATTATTTATGCATTCTGCGAACATTTTAAAAATGATAACTTATCTGATTTATTAGATGATCACAAAATTATT---AATCGTATGCAT 62194
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
62195 GATTTTATTCAT---AAA------CAACCA---ACTCTTAGTTCAAGAGCATTTCAATTAGCA---TTGGAAGTTTCATAT---TCTAAA 62266
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
62267 CGTTCTTTTAACGAAGCTACTTTGCAAGATTTTTTCAAAAATGAATTTAACATTAGAGATACCTTTAATGTTAATAATGGAGTATGTGAT 62356
61 K S R E Q F E M R T Y A K T - I Q I E T L T K N S N E I I D 89
62357 CAAAGCACTATTTTT---TCAGCACTAATGGCTAAATATGTTGTATCTTATTATAATTTGAATTCAAAAGATATTATTGTT 62434
90 F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62386
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 570 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.04
62387 AAATATGTTGTATCT---TATTATAATTTGAATTCAAAAGATATTATTGTTAATAGTACACCATTATATTTAACAAAAGATATTTCTCCT 62473
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
62474 GAAATAAAGGCCAGCATGGAATTTAATAAAAATTTAACAGGAAATTCGTGTCCTGATATTACTTTAAAAGAACATCCTTATGATTTTAAA 62563
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
62564 GATTCAAAGGATATAAAATGGAATAAAAATCAGATTTATTTGGTTGATAATACTAGTTTTAATGAACAGGCTATAATAATGTTAAATCAT 62653
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
62654 TTGGAAAAATCTTTGATTAATCAATTAACTGTTAATCATTTGATGTCTAGTGAATGTGTTCTTTATACTAAAGATATTTTAGCA 62737
91 I E Q - F K N N L F F G - L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 6084
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
6085 TTATTAAGTATTAAAGTTCGCATCATACTTACTCGTTATTAAATAATTATTTTTTTGAATTTGTGTTTTCTTATTAATCATCTTTCTTTT 6174
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
6175 GTTTTTTTTGTATTTCATCATAAAATGTTGTTAAAATATAATTCAAAATTAAAGGAA---AAATTACTTCAAAATTCTTATCCGAACTTT 6261
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
6262 GT-TCTTCAAATTCTTTTAAATAT---TTGTTAGCAAATAGATAT---ATATATATGCTGTTTAAAAATAATGACGTTATAGGTAAATGA 6344
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
6345 GGTAACAAAATACTACTAATTACATATATTGCAGTGATTCGTAAGGTGAATTTATTCATATTTTCTTTGAATTTTTTCATT 6425
91 I E Q F K N N L F F G L N I K V - V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 8532
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.14
8533 TTTTTTATATTTTGTTGTACATTTGTCCATTTAGTAATTATCTCATGTGTTGTTATAATACTTTTTAATCTAATTATTAAATTAAGATCC 8622
1 M F L T K C S - L H L K S F D L D V L K N S C I L I T N K K 29
8623 TTTTCGATAATGGTGTTT---TTTATATCTCCACAAGATTTCCAGGTAACATTATATTCTTTAAATAAATTATTATA-CCATTCTAT--- 8705
30 N S F K N L K I I G P I S L P T K I K K I T V L R S P H I D 59
8706 TGTTGGACGTATAATATAATAAAAATGAGGTGTTTTTTGCTCGTAATATATCTCATCAAAATAAGTAGGAATAAATGTTCTAAAAGAGAT 8795
60 K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D 89
8796 ---CTCCATATCATTAGGCGGAATACATTCATC---ATCATCATCCTCATTATAATCAGGAT-GCCAAAAATCTAATTCAG 8869
90 F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 11327
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.04
11328 TATTCTAATAATAATTCAGGAGATTTTTTATATTCATTCACA---GATAATTTTGGATACCTTTTATTTTTAATAAAAGATATTATTTTA 11414
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
11415 ATTGTTAAAAATAACACTATAATT---AAAATTAGAATG---TTTAACATATTTAAATTTTTAAAAGGGAAAAACATTAATTCTCATTCT 11498
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
11499 AAACATCGTTTTATGAAGAAAATCAAGTATTTTAATAAGAATATTACGTTATCTTGTGGACCATCAATAGATAACCATTCTATCAT-TTT 11587
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
11588 TTGTGTGAAGAAGGATCTGTTAATAACAATTTTAAAAAACCCATCATATCCATTCAAATTTTTGACTATTTAAGAATTCTCCTATTT 11674
91 I - E Q F K - N N L F F G L N I K V - V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 15450
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.16
15451 TTTTTTAAATATGACTTTAAACATGAAATAGTAATTTCAGAATTAAATATTTTTTTACAAAGTAAATTAGAAATTTCTGCTAAATTCAAT 15540
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
15541 GCATATAAATCATTACGGTTTATGTCAAATTTAGCTAAATACTTAGAAGTTTCGTCAGATAATGCTTTTGTAATAAATAGCTGAAATTTT 15630
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
15631 ---TCAAGGCAATTAATATTTAAGTCAAATTTAGTTTCATCTGTAGAAATTAAACAACTATTTTTAGCTGCTAATTTATTTTTAAATATT 15717
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
15718 GTTGCTAAATGTTGAGACCCGCTCATTGTACTATCTAAAAATATAACAAGTTCACTATTGTTATATAAAGCATTTTTTTCT 15798
91 I E Q F K N N L F - F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 18840
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.07
18841 ATTAGTTATGAAGTGATTTCGGTA---TTAAAA---ATA---TTAAGAGTACTAATAAAGAAA---ATTGCTATAAGAAAAGCGTATAA- 18917
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
18918 ACCATAAAAAATTATAATGTA---GCTCCGAGGACAAAGATTATGAAAAGAAAAGAACGATAATTATTAAGGTTGTTTCACATTAACAAT 19004
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
19005 ACTTTCAAAAATAATTCAAGAAAAGCATAATACCCG------TTGAACCTAAATGTTCTA---AAACACCTT------ATCTATAATTTT 19079
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
19080 ATAAGTATATTTAAAGAAAAGTTGCAGATGGTAAGAAATATAAAAACTATTAAAAGCATCTCAAAGAATTTTTTACAA 19157
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 22476
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
22477 TTACGAGATCTTAAGGTACACGTACAGATTCACGTATTTTCTCAAAGCGTGAGGCATAATAGTTC-TTTTTGACTTGAAACATTAAACCG 22565
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
22566 TTTTTTCTT---ATAAATCTACTAAAAGGTCTTGATCTATAGCATATCAATATAACTCGTAGGAAATCTTTAGCTATCCCTCATATGTAA 22652
31 S F K N L K I I G P I S L - P T K I K K I T V L R S P H I - 58
22653 AGAAGCACTATTTCACGTGCTAAGAGTGAAGTAAAGAA-AGATCATTCTTATTATTTTTAAAAACAGTTTTACGTAACCAATCAATTGCC 22741
59 D K K - S R E Q F E M R T Y A K T I Q I E T L T K N S N E I 87
22742 ATAAAA---ATAGCACGGTTT---TCA---CTATCGGTACAGGTAAATCATAACGACGTCCTGACTTATAGTTCTACGTATAAGAAA 22819
88 I D F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 25420
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
25421 TCTTATTTTTATAAAATTAAATTAAGAACGTTATCAAAGTTCGACCG-GACTTTTTAAAGCTTTCAAATTTAGGGTTAAACCCAAGGCAA 25509
1 M F L T K C S L H - L K S F D L D V L K N S C I - L I T N K 28
25510 TCTCATCAGTATAGGTAACCTAATTCCTATAGAGCGATCTCCTATATAGCCCAATGCTCAAGGATAAACGTTTATGAGGAAAAATTTATA 25599
29 K N S F K N L K I I G P I S L P T K I K K I T V L R S P H I 58
25600 CAAACTGCCCATAAACAAGGTTACTCCCATTTCACC---TGTTTAATTGTTTTTATCTTTTATTTAAACCAAGCAAAAATGAAGTTTAAA 25686
59 D K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I 88
25687 TAGTTTTTAGGGTATCATAGTGAAAGATTATTTTA-AGTTTGAGATGAAAAGTAATCTTTAGCTAATTCAAAATTAGTATGTTC 25769
89 D F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33018
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.06
33019 ATGTTTTATCAACAGTGCTTATCAACCCTTAAACAAACCATGATAGATCATTTACGTTTTACGCAAAATAAACCTACGGATCTAACTTAT 33108
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
33109 TATTTTTATCTTATCAAACTAATGTTTTTTCCAGAAGAATCAGATAGTTATAAAGTACCGTTATTTACCTCTGAACAAAAGAAGCAAGTA 33198
31 S F K N L K I I - G P - I S L P T K I K K I T V L R S P H I 58
33199 GAAGGTTATCTTTCTGAGCATATAAACTTATTTGTAAT-TCAAGATTTTATTCT---AAGTCATTATCAAGTGCCTCCAACAACATTTAC 33284
59 D K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I 88
33285 GGGTA-ATTTTCAAATATCCAAAC---TTATTAATAAACCTTTAGACAAGTTTTTTGGATCTACCTTATCAAATAATTCTTATT 33364
89 D F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33691
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
33692 CTCCGAATAAAAAAAGC-TTATCACAACCGAAAAGGTATCAACTAGATTCCTTGCATGTAATACAAAATAAATTGAATCCACAGATACAA 33780
1 M F L T K C S L H L K S F D L D V L K - N S C I L I T N K K 29
33781 GAGCAACTGCTTGCGTATACTAAAACGAACCACGAGAAGTTACAAGAACTTTATAATCGT---CAGGTTATATCTCATGTGCATCCCGAG 33867
30 N S F K N L K I I G P I S L P T K I K K I T V L R S P H I D 59
33868 ACTACACATACAGCCTTATTTCAAACGTATGTCCAAATAACAAGTTATCATGGAAAAACAACAATTCCAAATGCTTGTCAACTAAGTCGC 33957
60 K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D 89
33958 TTAATTAATAGTATGACGAAAAATACAACATTGTACTTTAATCGTCTAATTCTCTTAATAGATTTAGAGCCTATCTTAATG 34038
90 F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33793
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
33794 CCTTTTAAAACCCCATATAGT---AACATGACTAATAATAATATAAACACATCCCCTACTACATTAAATATAAATCCGCTTAGCAAGAAG 33880
1 M F L T K C S L H L K S F D L D V L K N S - C I L I T N K K 29
33881 CAAAGTCAAAGAACCTCTCCGAATAAAAAAAGCTTATCACAACCGAAAAGGTATCAA---CTAGATTCCTTGCATGTAATACAAAATAAA 33967
30 N S F K N L K I I G P I S L P T K I K K I T V L R S P H I D 59
33968 TTGAATCCACAGATACAAGAGCAACTGCTTGCGTATACTAAAACGAACCACGAGAAGTTACAAGAACTTTATAATCGTCAGGTTATATCT 34057
60 K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D 89
34058 CATGTGCATCCCGAGACTACACATACAGCCTTATTTCAAACGTATGTCCAAATAACAAGTTATCATGGAAAAACAACAATTCCA 34141
90 F I E - Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 34357
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
34358 TATATAATTGATTTTAGCGAAGGTTACTCCAATTCTTTTTGTTTTTAAGTTCTGTATGGTATCTTAATTGAAGTT---AATGCTTAATAA 34444
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
34445 AGCTTTTCAACA---AAGGTAAAAAGACCCTTATATGCCAACCAACTAATAAAGAGTGTGGATGTTTTATCTGCGACTTCTTTAAT-AGG 34530
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
34531 AGGGAGTCTTTAAAGATAGATAAGGCTTTATACTTTCAGATGTTACAGCATTATTCACA-AGTATGCAGAATACCGAATTATGTATATTT 34619
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
34620 GACGATGACCTATATGGGGCAATATAC---AATTTACAGGTAATCTTAGAAAGTGATATGCTTAAAAAGACTCTTATA 34694
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 42034
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
42035 CTGATAATGGTGTAAAATAATATCAGACTTAAACTGTTT---GTTAACATTCTATTTACTTCTTGCGTC---GTAAA-TCTCGTCGTATT 42117
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
42118 TCATTAAAA---TTGAATTTTCTTCTTATAATATATGGGTAATCGGCATTAAACCTTATATTCTTTTATATAAGGACGTCCTTTTGGAAA 42204
31 S F K N L K I I G P I S L P T K I K K I - T V L R S P H I D 59
42205 AATATATCACGAAAATATGATTCCTTAAATATCTTTTTCTTTTCGACGTTTATT---TTTTTTATACCAAAT---AAC---GTTTTATCT 42285
60 K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D 89
42286 TTCTTT---AAATTTTCTTCTAAG---TTTACT---ATGCGAATAAAGTAGGTTTTTTATATTTTCTTCGACCTTTATTTT 42357
90 F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44733
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.06
44734 GATATTGTAACATATGAAACAATTAAGTTACAG---ATATCTTCTGAA---TTACGGAAAACCATTATTAATTATCTTTTTTGTGTTAAT 44817
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
44818 AATTTAACATTAATTAGTATTGGCTATCCTATTAAACGCGACGCTTTGTACAAAGCGTTTACTATAATACATGAT---TATATTAATAAT 44904
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
44905 ATT---AGAGCA---TATGATAG-TTTACCTTCTGA---GTTATTTACGCGCAAACTTTTGAAAGGTGCTACAATGAAATTAGGTTATTC 44984
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
44985 ACAAGGTCAAGAGTTTCGGGAGTTAGATTTTCAAC-AATATATTGAAGATTATTATTCATCTAAAGGATTTAATAAAG 45061
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45031
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
45032 AAAATCTTAATAGAA---AGTTTAATAACTAAGAATTTTAAAAATCTGATATATGAGAA-GGATGCTACATCAAGTGGCCTACAGATAAT 45117
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
45118 AGC------GATGTT---ATTGGTTCAGAATCTTCTGATATTTATCAGATAGCGATAAATTCCTTTATTTATAAAATTGAAATTCAACGT 45198
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
45199 AAATTTTTAGAATCCTTCTTTTTAAAGATTTTAAATAAATCGTTA---GTAGAGTTTTTAAATCAAGAGAAATCTGAAACTTTGGGATAT 45285
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
45286 GCT---CTTTTTATA------TTGTGGACAGCACCTACATTCGATATTGTA---ACATAT---GAAACAATTAAGTTA 45348
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45491
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
45492 ATTCTGCATAATGGTTTCGATCTTGTTAGGAAAAATTTCAAAATAACACAAAAATTATTATTTCAAGAAATCTTGTATAATGAAACAAAG 45581
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
45582 TTTTTTGCCAAATTAAAAGCTGCTAATCCTACACTGGATATCAGAAAATTTAAAATAATTCCTTTAACGATTTTGAAACGTTATTATCTT 45671
31 S F K N L K I I G P - I S L - P T K I K K I T V L R S P H I 58
45672 TCTGATAAATATAATTTTAAA---GAAACAAAGTACTTAGCTCAACAACAGCAAGCATTTTGTTTGTTCGAGTATTACAAAAAC------ 45752
59 D K K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I 88
45753 GGTTATATT---ATTATTCATTCTCAT---TTCTTT---ATGAACCCTGTACTTTCTTTTACCTATACGTTCGGGATAAAGGAA 45827
89 D F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47627
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
47628 ATG---ATAACGTATTTGGACGTTTATATT---TCCGAAGAAGAAGCTCTATTTGATAATCCTACTTAC---ATATCTTCTAAGGAAAAG 47708
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
47709 AAAATAAAA---CTTGAACTTAATTTGGGATTACAGATCCTTAATTGGTTGATAGATCTAAATATTCTTCAGGAA---GAAATAGATAAG 47792
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
47793 CGTAATGT-TCCTCATATTACATTTTGGCATCTGCC---ACTTTATATAAGCCTCATATTTCGAATCATATCTATCCTTCAGTT---TAT 47875
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
47876 AAACAAAAGTGGGTGAACAATTCAAAATTAAGATTCAATTTGAAAGACGGAATATTCTAAATGCAGGACATACTAAAA 47953
91 I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 50694
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.20
50695 ACAACGTTAAAAAGACTTAAAGTATTATTTCTCGCTTAGATGCTTTCAGCGATTAATAAAAGATTCGTAGCGAATAGCGTGCGCAAACAG 50784
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
50785 ---CTCAAAAACCAGAGAATCGTTCCACCAGTC---CTTTCTACTAGACAGAACAACTTTTACGTCTTATGAAATAGTAATAGGGACCGA 50868
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
50869 ACTGTCTCACACGTTCTAAACCCACTCACGTACCACTATTAATCGGTAACAACCGAACCCTTGAGGCCCTTTTCAGTCTCAGATGTGATG 50958
61 K S R E Q F E M R T Y A K - T I Q I E T L T K N S N E I I D 89
50959 AGCCGACATCGAGTGCCAAACAATTCCGTCATAGGT---ACTCTAAGGAATTATCACCTGTTATCCCCGGATACCTTTTAT 51036
90 F I E Q F K N N L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 58069
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
58070 ATGTATTTACCTAATCCTGAAAATATTCTAGAAAAGATATATTTGGAAACGTTAAAATGGTTCTATTATTTGGGTTTAGATCGCAAG--- 58156
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
58157 GTATTAAAG---TTA---ATAATTTATTAA---AGATTTAATATAAAAATAAAAGAA---TCTTGTCTA---AGCTTTTTGTTGAAAATG 58231
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
58232 TCTTAATATAAAAACTATCAGATAGGTAAATATTTATCATGCGATCTCTATACAAATACCATCAGCATGGATTATAATAATCTTGCCTTT 58321
61 K S R E Q F E M R T Y - A K T I Q I E T L T K N S N E I I D 89
58322 TTTCCAAAAGCACGTAAGGTTATCGTTTTTTTAAACATTTAAAATATTAAAATTTTATTAAGATTTTTTAAATACTGTCGTTAT 58405
90 F I E Q F K N N L F F G L - N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59336
Protein: lcl|KC353356.1_cdsid_AGH24268.1 [gene=rps10] [protein=ribosomal protein S10] [protein_id=AGH24268.1] [location=22565..22915] @ 0
DNA length: 696 Protein length: 116
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.14
59337 CATTATTTT---AAAGCAAAT---AAAATAAAACCATTTAAAAAGGAAATA---AGAAACTTGGAACCATCC---TCCAAGAAAAAGAAT 59414
1 M F L T K C S L H L K S F D L D V L K N S C I L I T N K K N 30
59415 AGTTGTGTAAACGACCAAATATTAAATTACATA---TTCTGCAATAAAATAAAAAGCAAAGGACCACTAGAATATTCACACTATAACCTG 59501
31 S F K N L K I I G P I S L P T K I K K I T V L R S P H I D K 60
59502 CAA---CAAGTTCACTTCAGCTTCAGGCAA---TCAAAAGGAGTACGATTAGTTTCACTAGTATAGCCACAAAATAAACTAAGCAAAGGG 59585
61 K S R E Q F E M R T Y A K T I Q I E T L T K N S N E I I D F 90
59586 TGCTAAAGTATTATAAACCAAGTATTGTTTGAGCATTACAATATCAACAAAATTAAAGATTGAGCCAAAATACAACTAATA 59666
91 I E Q F K N N - L F F G L N I K V V F T Y S K D L L L 116
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 180
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.05
181 TTCTTCCGAAATATTATGATAACATATCTTTTACTTAATTCCTTTTTATTGATTAAACTTATTTTATTTATTTTAATTAGAATTTTTCTA 270
1 M T R S I W - K G P H V D S S L L S K I I K I K K I D S K K 29
271 ATTCCAAATATTTTTTCTAAATATATAATTATTATTTTT---TTTAGTATTATTATATACATATGTTATAAATATCCTCGT---ACCAAT 354
30 K I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S 59
355 ATATTAATTAAGGAAGATTTATTCGAATATGCTTTA---AAA---ACAACTAAAGAAAAAATGATAAATATATGTATCATA 429
60 V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 318
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
319 ATTATATACATATGTTATAAATATCCTCGTACCAATATATTAATTAAGGAAGATTTATTCGAATATGCTTTAAAAACAACTAAAGAAAAA 408
1 M T R S I W K G P H V D S S L L S K I I K I K - K I D S K K 29
409 ATGATAAATATATGTATCATAACGTTATATATATTTACTTTTGTTATAGGTATATTTTATCTTAGATATATAAATATAACAAAAAAAGTA 498
30 K I N T W S R R S V V L P Q F I G L S F N V Y - N G N R W V 58
499 GACTTAAAAATTTATTATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAA---GAAGAAATTATTTTAAATGTGGTAATA 579
59 S V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1629
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.09
1630 ATGAAGCC-TCATATTTCCCTTCTGATGATATTAATGATATGATACCAGTACAAATGCAAGATATACCTGTTAAATCCAAAGAGCCTAAA 1718
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
1719 ATAGAATATCCTAGAAGACCTAATATTGATCTTAAACGTGAAACAATTATCCCTAGATTTGAAATTGAAACTGAAACAATACCACCTACA 1808
31 I N T W S R R S V V L P - Q F I G L S F N V Y N G N R W V S 59
1809 ATAGTAAATCCACCGGATGTTATTAATAATGATTTACCTTTTGAAGAACCTGTTGAGGAGCCTATTGAAATAAAAGTAGAA 1889
60 V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2243
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.05
2244 ATAGTTGAAGTTTTAAGTAATTTAGAAAATGTGGATTCTAACTGTTATTATGATAATCCTGATATCTTAGATGG-GATTGTCCAAGATAT 2332
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
2333 TGTAACACGTTT---TACAAAACAATGATCTTATATCAGAAAATTCAACATACT---AATTTTTTTACAAATAAAATTTCTTATAGTAAT 2416
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
2417 TTTATCCGTTTT---TATCCTGGCAAT---TTAGGGAAAACACAACCA---AAATCTATTAAAGAAATGCCTGAGAGT 2485
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2830
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.13
2831 GCCGTTTATGATACAAAACAAGGATCATCCGATATTCAATATAATTTAGAAAAAATAATTAAAGATTTGAAAATAGCTATACAGGAAAAA 2920
1 M T R S I W K G P H V D S S L L S K I I K I K K I D - S K K 29
2921 TCTTTGAATAAAGAACAAGTAAAAAGCATTATT---GATGAT---ATTCGTAAAAATTAT---GTTACTAAAGGGGTTAGTATAGAGAAT 3001
30 K I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S 59
3002 GCTAATGAACTTTTAACTCTTTGGAAGTCTTATGATTTTCAATATGAACCTTTAAAACAAATTTGTAAAATTAAAAAAGAT 3082
60 V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3007
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.06
3008 GAACTTTTAACTCTTTGGAAGTCTTATGATTTTCAATATGAACCTTTAAAACAAATTTGTAAAATTAAAAAA---GATATTATT------ 3088
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
3089 ATAAATAAAGAACAAGAAAAA---ATTGTTATAGATTCTAAATCATCTTATGAAGAAAAATTGAAAAATTTAGAAGAAAAAATGTCAATA 3175
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
3176 GCTCTT---AAAAATATAAATAATTTTCTTGAAAAAAATAAAGATTATACTAAAGAATTTCTTGAAGCAAAAGAATTA 3250
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4003
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.06
4004 ATGACGTTGTATTTTTAT---GGCAAAAATACAGATAATAAAAGTATTGTAGAAGAAATCATATTTACGCAATATGATTTAACAAAA--- 4087
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
4088 ---AATATATGGTCCGAAAATTATTACCAATATCCTTTTAATGTGGATCAAGAATTTTTACGTCAACTTTCTATTATTTTTTATAGTAAT 4174
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
4175 AAATTACAAGAACTTCAACAGGATTATAAAGAACTACAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAAGAC 4252
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4694
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
4695 ACAGAATATCGCTTTTGGATTTTAATTTATATTTGTTGCATATATATATATAGTATTAAAAATATTCTGAAGGCTTCAGGAGATAACTAT 4784
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
4785 CTTAATTTAAAAGATATTATAGAGATATTGTATGCACCTTTGAAAACTATAGATCATGCTATT---AAATATAATAAATATATTAAACCT 4871
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
4872 TATTATTACAAA---TTTGTGAGT---AAATTTTATAACTTTACTGAAACAAAAAATATAAATGATGACCAGATACAA 4943
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5642
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.14
5643 CCATTTATGGATTTCGATAGCGGTTCACATAATAAAAATCTATTAACAATAGAAAATATTAAAAAGATATTATGCAAGATTATAAAAAAT 5732
1 M T R S I W K G P H V D S S L - L S K I I K I K K I D S K K 29
5733 ATTATACAAAAATGGTCAAA-AGAATAATAAAAATAATAATGCAAATGATAATAATAATTTTA---ATA---AATATATGTAAAATTATT 5815
30 K I N T W S R R S V - V L P Q F I G L S F N V Y N G N R W V 58
5816 ACTTTCAAAGTAAAAGCAGATGAAAAAAATCATCAGGAA---GTCTTTGAAAATTTTAGAAAAATACTTAAAGAAGGTTTGTTT 5896
59 S V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6399
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
6400 ATGATGCGAACTTTAATACTTAATAAAAAAATAAATAGCTTTCTGTATCTTTGTAAGCCGATAGTCATTCAAATATCTAAGCGTTTTTAT 6489
1 M T R S I W K G P H V D S S L - L S K I I K I K K I D S K K 29
6490 CCCACTGATAAAAAAATAGGTCATGCTAAAAAATTGCTTGATCACCGTTCAATGTCTTTTTCTAAAAGAATTTCGAATCCACAATGTCGT 6579
30 K I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S 59
6580 AAATTG---CGTCAACAATGTAAACAGCATCATAATAAATATATTACTGATACAAAAATACAAACTAGACATAGAGGTTTA 6657
60 V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6927
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
6928 CCTACATTTCCAATACCTCCATTGCATTTTGGTATTACTAATGATACCCAACATACCCCGTCTACTACTGTTTTAAATGATTTCTCTAAA 7017
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
7018 ATAGATAATACTTCTTCAAGCGTAAAACCAATTCCTGAATTAAAAAATCCAGACGGTGTTATATATACTACTAAT---ATTACTGAAAAA 7104
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
7105 ACAAGTATGGAAGAATTAACCAAGCAGCAACTTATTGATGAATTAAAAAAACGTAACTTGATAAAAATAACAAAATCT 7182
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7026
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
7027 ACTTCTTCAAGCGTAAAACCAATTCCTGAATTAAAAAATCCA------GACGGTGTTATATATACTACTAATATTACTGAAAAAACAAGT 7110
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
7111 ATGGAAGAATTAACCAAGCAGCAACTTATT---GATGAA---TTAAAA---AAACGTAACTTGATAAAAATAACAAAATCTCCTGCAGTT 7191
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
7192 ATTATTGAAACAGAAAGTGATGGTCATATACGTATTGGTAATAAAGATAATGATTTAATATTTACGAAACACGGGCGAGCG 7272
61 L V T E D M I G H - K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7629
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.14
7630 AATGAGGCTTATGTAGCCAAGTTTGATCAAGACTATTTTTTTACAATGAGTCTTAATGTAAAAAAGGATTTAGTAGATAATTATAATAAC 7719
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
7720 TTAAAAACTAAACATTATGAGAAATAT---ATGCCACAAACAATATCA---AATGAACAATTATTAAATATGTGCAAAGATGTTGACAAA 7803
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
7804 GAAGCTCAAAAAAAAAAACCTAAACACCCTATGACTCTTGAACAACAGCAAAAAAAAGAAGTTGAAAAACAGAAAAAT 7881
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8117
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 38 Length-adjusted: 0.44
8118 CTTATTAAACCTAAAGTACCACCTCAATTTATACTTAATGTTTTGGTATCTATTATAAATACTGTAAAATCTTTTGACAATTATACGAAA 8207
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S - K K 29
8208 CAATTTAATCTTATTTCCAATACCTATATAAAAATATTTACCTATATAGCAAATAAAATTAATTATTATAATGTCATTTTATGGGAAAAA 8297
30 K I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S 59
8298 ATCTTACTTATTATAAATACTGTACCGCATATCATTTTACTTTCTGCTCTATTCATAGATACTTTTTATTTAGGTAAATTA 8378
60 V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8402
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
8403 GTTACATTATTCTTTTTCTTAATCCCATTTAGTTTATATTCTTTTGACTATGTTTGTGAACACTATATAAATTATTGGGAAAAAAATTCT 8492
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
8493 GAAAATGTATGGACAACATATAAACCAAATGTCTTACCTCCTGAATTAGATTTTTGGCATCCTGATTATAATGAGGATGATGATGATGAA 8582
31 I N T W - S R R S V V L P Q F I G L S F N V Y N G N R W V S 59
8583 TGTATTCCGCCTAATGATATG---GAGATCTCTTTTAGAACATTTATTCCTACTTATTTTGATGAGATATATTACGAGCAAAAA 8663
60 V L V T E D M I G H K L G E F A P T R - K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12495
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
12496 ATGGAAAAA---TTAAAAGAAGAAACTACTATT---AAATATATTTTAAATGATTTTGAACAAGTACCAGAAGAGTTAGTCAATAAACAA 12579
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
12580 ATAAATCAAATGTACTTACGTTTTAGTATAATACTAATATTACTTTTTATGACAATTTTTCTTTATGATGTTATTAGATATTCTATAATA 12669
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
12670 ATAAAAATACTTAATTACAATATATATTCTTTTTTTATTCTATTGCCATTAATTTTTATATTATATTCAGCAACTAAA 12747
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13896
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.10
13897 ATGATAAATACAATAATACAAAGA---AATATTGC-TTATCTTTGATGGAAAGAGTATGGACAACATTTCAA---GAT---AAAAATATT 13976
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
13977 ACTAGTATTCAATTCCT-GAAAACATCGTATGTGAATTAGCAATAGGTATAGGTACTTCT---TATATT---GAATGGTGGTACAGTATT 14059
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
14060 TTTATTAATAAAAATATGTATAAAAATAAAACTTATGAAGAATTTTGCACTTTATTTTGTGAAACATACAAAATAAAA 14137
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14062
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.06
14063 ATTAATAAAAATATGTATAAAAATAAAACTTATGAAGAA---TTTTGCACTTTATTTTGTGAAACATACAAAATAAAAACAAAATCGGAT 14149
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K - 29
14150 AAAATTTTCAAATGGCTTTGGAATAAAGAAAACAATCCAGATGATTTATTAGAACAAACAGGCGCCTTT---GCAGTAAGAATAGGTTCT 14236
30 K I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S 59
14237 TATCTTATT---GAATATTTGATAAAACATAACATTTTTAAAGAATCGAGTACTGCTGGATCTAATAATCCAAGATCTTTA 14314
60 V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14755
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.10
14756 GATAATCACTTATGCAAAAAACTAATTCTTACAAAAAAACAATATTTATCTAAATATTCAAAACTAATGGAAAAGGGTTTAGAAAATAAA 14845
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
14846 CTCCATAAAAAAACTAGTAGTATTCATACTCTTGATCAATACATTCAACATGATTTGAATAAAAATGAACAGAGTACTAAAGACTTAGCT 14935
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
14936 ATTTTAGCTAAAGAGATAAATGCTGCTAAACTA---CTTTTAAATTGCTATTATAAAGTAGTTGCTCAAAAATTTTAT 15010
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15217
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
15218 TTTGCAAATTATCTTTCAGCAGATTCTACATTACAAAATATGAGCTTTGATTTATTTGAAAAACAAACTAAAGATTTACAGGATGAACAT 15307
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
15308 TTAGCAAGCTTTTTCAATAAAAGTACACCATTAATACAACAT---AGCTTAAGTTTTGAT---TATTTA---TCTAAAATGATACACATA 15388
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
15389 ---ATT---AAAAATTAT---GCTAAAAAACCTGGGGAGATATTAAATATTCTTAGTATTTTATATTATAAAGAAAAA 15457
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15319
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
15320 TTCAATAAAAGTACACCATTAATACAACATAGCTTAAGTTTTGATTATTTATCTAAAATGATACACATAATTAAAAATTATGCTAAAAAA 15409
1 M T R S I W K G P H V D S - S L L S K I I K I K K I D S K K 29
15410 CCTGGGGAGATATTAAATATTCTTAGTATT---TTA---TATTATAAAGAAAAAAAT---GCTTTATATAACAATAGTGAACTTGTT--- 15487
30 K I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S 59
15488 ATATTTTTAGATAGTACAATGAGCGGGTCTCAACATTTAGCAACAATATTTAAAAATAAATTAGCAGCTAAAAATAGTTGT 15568
60 V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16300
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.06
16301 TTAACATGGTCA---TATAAT---CCAAGAAAAATGAAAATATTACGTATAAATGTTGTAAAATATTCAAAAATA---ACAAATGAC--- 16378
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
16379 CTTAAATCTTTGAAACGACGTATGATTAACGTAGCATATTTTACAGGAAAAATTGATCAAACTAAAATATATAACTCA---GTTTCTGCT 16465
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
16466 TTTATTATACATACAGAGGAAGCCCGATTAATGATGTATTTTATATATTCCTCACAACAACTTAATAAAGCTTTACAC 16543
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 23798
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.09
23799 GTTATTAACAAAGTAATTAAAGAATCTTCTATA---AAG---CTCTTGATGAAAATATTAAAG---AGAACATAAACCAGTAATAAA--- 23876
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
23877 ------ACAAAAAGTCGATCTAGTACTATATAAACCCTTTTGTTGGAA---AGTAATAGTGTTTATACTGGTGCTAGATTAAA-AGAATA 23956
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
23957 TATGTACTTCTAGA-ATGGTAGGTTTTAAACTTGGTGCTTTGCTTTTACAAAGAAATTAGGTAAGTCTACATAATAGTGAA 24036
61 L V T E D M I G H K L G E F A P T R K - V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 29505
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.08
29506 AAATGTAAGAGTATCTTTAATAATGGAAAC---AATTAAAGAGTAACAACCCCAAAATTAAAATTAAAACAAATAAATATTATGATGAAG 29592
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
29593 ATCAATAAACCTTCCATCAAAGGAGAAGCTGATCTTGAA---AATTCCATTGCCATTAC-GTGCTAAATCATAATCAT---TGTAAAATA 29675
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
29676 ATTATTATGTTT---TTAATTAATAT-TTATTGAAAGTATATTTCCCA---AAAAGTATTATAAAAATATTACAAAAA 29746
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 29712
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.16
29713 TTTCCCAAAAAGTATTATAAA------AATATTACAAAAATTTTGCTTAATAAAATA---AAAATAAGTTAAATGAAAAAAAGATATGGA 29793
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
29794 CTGAATCTA---TCATTGGGAAGAATTCTTCTTTACGTTTTCCTCGATAGTATCCATAGAAGATATAAC---AAC---TATAAAAGTATT 29874
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
29875 CTT---CAGCAAATAGCGAAGAAATAGAATCTCTTTAAATATGCGCTTACTATGAAAAATGCAGATCGGAAGAAGCGT 29949
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42583
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.09
42584 TTTTTCCATCAGGTGTGGGCGTGTTTTTACCGTTTAGT-AAGAGCTTAGTTGAAAGACAAATTACGTTCGATATTTGATATTCCAAAAAG 42672
1 M T R S I W K G P H - V D S S L L S K I I K I K K I D S K K 29
42673 AAGATC---ACATGGCTTACTAGAAAGAAAAAGGTTCGCCGTTTATAGAATATGACTCCAGACTTCAAAAGACATTATAGATATAGAACC 42759
30 K I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S 59
42760 ---TTTATA---CAATTATACTTA---CAGAAACTAGAAGATTTCTTT---ATACAGGCCATATTTAAAACGAAAAAAACG 42828
60 V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42583
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.09
42584 TTTTTCCATCAGGTGTGGGCGTGTTTTTACCGTTTAGT-AAGAGCTTAGTTGAAAGACAAATTACGTTCGATATTTGATATTCCAAAAAG 42672
1 M T R S I W K G P H - V D S S L L S K I I K I K K I D S K K 29
42673 AAGATC---ACATGGCTTACTAGAAAGAAAAAGGTTCGCCGTTTATAGAATATGACTCCAGACTTCAAAAGACATTATAGATATAGAACC 42759
30 K I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S 59
42760 ---TTTATA---CAATTATACTTA---CAGAAACTAGAAGATTTCTTT---ATACAGGCCATATTTAAAACGAAAAAAACG 42828
60 V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46151
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.15
46152 GATACCATAGCCAATGACACAGGT---CATGTTAAGAAATCTATTATGAATTTAATACTTCGC---AGCAAA---GAT---CAAAAACCA 46229
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
46230 TTTACATCATTTAATATAAATATTCTAACTATAGCAAAACGTATCAAG---GATTAT---GTTATTAATGATAATGAT---ATTCTTATG 46310
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
46311 AATACGGATAAAGATAAATTGGCTCAAGCTATT---GAAAGTGCTAAACTTATTGATTTATCTAAACCTAAAAAATCT 46385
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46682
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.23
46683 TTTACTAAGTATACAGGAGCAACACCAGCGATTCCAGTAACTCAAATGCCTTCAATACTCAATCCTACTCATATTGCATATATTCAACAA 46772
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
46773 TTAGAAGCTTTTCAAGCAGCAACTTATGTTGAAGGGAAATTTTCAGTGTTAGAGGGTATTGAATATATACATAATAATCAACCACGATTA 46862
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
46863 AATAGGGTTGAGGACACCCATAGTTTACAA---GGTGAAAATACTTCTTATCATCTTTTTATAGAAGAATACAAGTCT 46937
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 49286
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
49287 GTGCTAAGGTCCTTGGTTAAAGGAGAAGAG---TCCTCACACTAGCTAAGGACCGCAATAAAACTTAAGTCAAAGATATCTTATTACAAA 49373
1 M T R S I W K G P H V D S S L L S K I I K I K - K I D S K K 29
49374 GACAAAAGGATGTAGGCTTTCAAGCAGCATCTTTTAAAGAAAGCGTTACAGCTCACGTTTCAAGTACAAGATATTACAAATAAAGGATTT 49463
30 K I N T W S R R S V V L P Q F I G L S F N V Y N - G N R W V 58
49464 TTCGTTTTATCCAAAGTAGTGAATTTTATTTTGATAGCAGAATCTTAGTTTTTAATGGATAATTTAGTAATATTTTATTTTAAATCT 49550
59 S V L V - T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53470
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.23
53471 GTAGAGCATTCGGTTTGGGACCGAAAGGTTGCGAGTTCAAATCTTGTCGC-TCGATTCTTTTAATCAGAACTCTAGGTTTTAGATT-AAA 53558
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
53559 ATAAATATGCTTAATTTTTTAATTGGTATTTTAATAATATTCTTTGCAAAAGAATTCATAATTTTAAAT---CAAGAAATTATTATTTAT 53645
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
53646 TCTATATTTCTATCAATTTTATTTTTTTGTATAAAATCTTTTGCTTCATTGGATACAATATTTGAAAATATTCGCTCT 53723
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61940
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.17
61941 TTTATAAGGGAAATACAAAAAATTTTATTTGTAAAAAAATT-ACCATAAAAAATTTTATCCGTTTTTATCCAGGTCATGTGAATAAAATT 62029
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
62030 ATCAATATTATTAATACTTCTCTAAAAAAAGTATCACCACAAGCACTT---ATTGAACAAAATCGAATAGAAGCTAATAAAATGATTATT 62116
31 I N T W S R R - S V V L P Q F I G L S F N V Y N G N R W V S 59
62117 TATGCATTCTGCGAACATTTTAAAAATGATAACTTATCTGATTTATTAGATGATCACAAAATTATTAATCGTATGCATGAT 62197
60 V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62188
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.28
62189 ATGCATGATTTTATTCATAAACAACCAACTCTTAGTTCAAGAGCATTTCAATTAGCATTGGAAGTTTCA---TAT---TCTAAACGTTCT 62272
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
62273 TTTAACGAAGCTACTTTGCAAGATTTTTTCAAAAATGAATTTAACATTAGAGATACCTTTAATGTTAATAATGGAGTATGTGATCAAAGC 62362
31 I N T W S R R S V V L P Q F - I G L S F N V Y N G N R W V S 59
62363 ACTATTTTTTCAGCACTAATGGCTAAATATGTTGTATCTTATTATAATTTGAATTCAAAAGATATTATTGTTAATAGTACA 62443
60 V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 22416
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
22417 ACTCGTAGGAAATCTTTAGCTATCCCTCATATGTAAAGAAGCACTATTTCACGTGCTAAGAGTGAAGTAAAGAAAGATCATTCTTATTAT 22506
1 M T R S I W K G P H V D S S L L S K I - I K I K K I D S K K 29
22507 TT-TTAAAAACAGTTTTACGTAACCAATCAATTGCCATAAAAATAGCACGGTTTTCACTATCGGTACAGGTAAATCATAACGACGTCCTG 22595
30 K I N T W S R R S V V L P Q F I G L S F N V - Y N G N R W V 58
22596 ACTTATAGTTCTACGTATAAGAAAACAGGTTTTAAATTATACAACTTTGATATAAGCATCTATGGGGTTTTTTACATCACAGTA 22679
59 S V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32642
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.06
32643 CTAATACGAAGTAAAGTTAAT---CCATTAATAATTTCTCAAGATTCTCAGTGGTGTAGTGCTATTGCGAATATC---TTTTTAAAAGAT 32726
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
32727 GCTAATTTGGCAGATTACTTAAAGATA---TTTCCC------GTAGGCGCAAAGTATTTAAGTTCCTTTGAACAGAAAACAATATTATTT 32807
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
32808 TTTATTCGCTTAAATGTAATTCATCACGCGACAGGATTGCTTTCAGATACTTCCAAGTTAATATTTAATGAAAATATT 32885
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33865
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.09
33866 ACTAATAATAATATAAACACATCCCCTACTACATTAAATATAAATCCGCTTAGCAAGAAGCAAAGTCAAAGAACCTCTCCGAATAAAAAA 33955
1 M T R S I W K G P - H V D S S L L S K I I K I K K I D S K K 29
33956 AGCTTA---TCACAACCGAAAAGG---TATCAACTAGATTCCTTGCATGTAATACAA---AATAAATTGAATCCACAGATACAAGAGCAA 34036
30 K I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S 59
34037 CTGCTTGCGTATACTAAAACGAACCACGAGAAGTTACAAGAACTTTAT---AATCGTCAGGTTATATCTCATGTGCATCCC 34114
60 V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 34318
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.15
34319 CTAATAAAGAGTGTG---GATGTTTTATCTGCGACTTCTTTAATAGGAGGGAGTCTTTA-AAGATAGATAAGGCTTTATACTTTCAGATG 34404
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
34405 TTACAGCATTATTCACAAGTATGCAGAATA---CCGAATTATGTATATTTGACGATGAC-CTATATGGGGCAATATACAATTTACAGGTA 34490
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
34491 ATCTTAGAAAGTGATATGCTTAAAAAGACTCTTATATCC---TCGCGAGATAAAGAAGCATATAAGTATATCAAAGAG 34565
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 34318
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.15
34319 CTAATAAAGAGTGTG---GATGTTTTATCTGCGACTTCTTTAATAGGAGGGAGTCTTTA-AAGATAGATAAGGCTTTATACTTTCAGATG 34404
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
34405 TTACAGCATTATTCACAAGTATGCAGAATA---CCGAATTATGTATATTTGACGATGAC-CTATATGGGGCAATATACAATTTACAGGTA 34490
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
34491 ATCTTAGAAAGTGATATGCTTAAAAAGACTCTTATATCC---TCGCGAGATAAAGAAGCATATAAGTATATCAAAGAG 34565
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 40052
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.06
40053 TATTGCTATCATATATTTAAAGAAATTTTAACTCTCGGATATAACGTTTCGCTCGTAATT---GTGGAGAACATAACTAAATCCCCAAAT 40139
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
40140 ATATCCTTATTTCGTAAAAGACGTAAAGTATTATA-CATAAATTATTACTGGTATTTCACAGAAAGAATTACCAGTCTTAT---AGTGGC 40225
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
40226 ---ATTCATGATACTATCATAGCAGAAAAACGGCTGTCATTTACCAGGATGAGTTACGTAATCCAG---AAATATAGG 40297
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44836
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.10
44837 GCTCTTTTTATATTGTGGACAGCACCTACATTCGATATT---GTAACATATGAAACAATTAAGTTACAGATATCTTCTGAATTACGGAAA 44923
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
44924 ACCATTATTAATTATCTTTTTTGTGTTAATAATTTAACATTAATTAGTATTGGCTATCCTATTAAACGCGACGCTTTGTACAAAGCGTTT 45013
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
45014 ACTATAATACATGATTATATTAATAATATTAGAGCATATGATAGTTTACCTTCTGAGTTATTTACGCGCAAACTTTTGAAA 45094
61 L V T E D M I G H - K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45934
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.31
45935 CTGTGTCATTGGCTATGGTAT---CCGAAAATTCGGAGCCGTTTAAAACTTTCGATAAA-CGAGTACGT---ATACTTTCAAAACGTTTA 46017
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
46018 AGGACTCTTTTTAGTATAGTATATTTCTTATCCCCA---ATCTTAGCC---AATTTTGAATCGTTTAATTCGTCCAGGGCATCAGATATT 46101
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
46102 AATATTTTCGCTTCGGAA---GGTAACACGTTAGCT---CTTTTACCGCTAACAAGAATATATACAGAAAATAGATAT 46173
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45934
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.31
45935 CTGTGTCATTGGCTATGGTAT---CCGAAAATTCGGAGCCGTTTAAAACTTTCGATAAA-CGAGTACGT---ATACTTTCAAAACGTTTA 46017
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
46018 AGGACTCTTTTTAGTATAGTATATTTCTTATCCCCA---ATCTTAGCC---AATTTTGAATCGTTTAATTCGTCCAGGGCATCAGATATT 46101
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
46102 AATATTTTCGCTTCGGAA---GGTAACACGTTAGCT---CTTTTACCGCTAACAAGAATATATACAGAAAATAGATAT 46173
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47675
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.17
47676 GAAGAAGAAGCTCTATTTGATAATCCTACTTACATATCTTCTAAGGAAAAGAAAATA---AAACTTGAA---CTTAATTTGGGATTACAG 47759
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
47760 ATCCTTAATTGGTTGATAGATCTAAATATTCTTCAGGAAGAAATAGAT---AAGCGTAATGTTCCTCATATTACATTTTGGCA-TCTGCC 47845
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
47846 ACTTTATATAAGCCTCATATTTCGAATCATATCTATCCTTCAGTTTATAAACAAAAGTGGGTGAACAATTCAAAATTA 47923
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 52207
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
52208 GTTTTGCGCGGTATTCGAATTAAACCACATCTCCACCCCTTGTATAAGTCACCGTCAATTCCTTTGAGTTTAACCTTGCGGCCACATTCC 52297
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
52298 CCAGGCGGTGTTTCACGCGTTAGCTTTAAACCCCCTAAATATATTGACTATATTAAAGACGTTGAACACTCATTGTTTAAGGTATGGACT 52387
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V - S 59
52388 ACTAG-GTCTCTAATCCTATTTATCCCCATACTTTAGTACCTAGCGTTAGATCAGAATCGGATGTTGCTTTCGCTATCGAA 52467
60 V L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59375
Protein: lcl|KC353356.1_cdsid_AGH24270.1 [gene=rps19] [protein=ribosomal protein S19] [protein_id=AGH24270.1] [location=23817..24077] @ 0
DNA length: 516 Protein length: 86
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.06
59376 GAACCATCCTCCAAGAAAAAGAATAGTTGTGTAAACGACCAAATATTAAATTACATATTC---TGCAATAAAATAAAAAGCAAAGGACCA 59462
1 M T R S I W K G P H V D S S L L S K I I K I K K I D S K K K 30
59463 CTAGAA---TATTCACACTATAAC------CTGCAACAA---GTTCACTTCAGCTTCAGGCAATCAAAAGGAGTACGATTAGTTTCACTA 59540
31 I N T W S R R S V V L P Q F I G L S F N V Y N G N R W V S V 60
59541 GTATAGCCACAAAATAAACTAAGC---AAA---GGGTGCTAAAGTATTATAAACCAAGTATTGTTTGAGCATTACAAT 59612
61 L V T E D M I G H K L G E F A P T R K V V K H K K K 86
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2518
Protein: lcl|KC353356.1_cdsid_AGH24271.1 [gene=rps3] [protein=ribosomal protein S3] [protein_id=AGH24271.1] [location=24105..24968] @ 0
DNA length: 1722 Protein length: 287
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.08
2519 TCAGGTACAACATTACAAGATCTTGAA---GAAGTTGCACAAGATGTAATGTATCCCAAAGAAATGTCT---AGTATTCCTACTGAAAAA 2602
1 M G Q K V N P I S L R I G V N Q L W D S R W S H D K K Y T K 30
2603 AGT---GAAGAACCAATTAAATCTGCAGCAGTTAAAGAAGAAGAAAAAAAAATAATAGAAAAACTTATAGAAGCTGATACTATAGCGGAA 2689
31 Y L E Q D L S I R S F I E D L C N Y Q E I L I G K L S I W R 60
2690 AAAATACAAGGTAATTCTCATATTTTTAATCCATTAAGATTAGTTTATAACACCAGTAGTAAAGTATGGAATTACCTAAAAAAAAATGTT 2779
61 S C S M D S L T I N - I K E V K N V K P N L F I Y F Q M Y V 89
2780 GAATTTAAATTCCATAAACCTGAGTCTGATAATTATACAGTGCCTATTACAGCCGTTTATGATACAAAACAAGGATCATCCGATATTCAA 2869
90 P Y K T Y S N N K E Q K Q E W L I N L E N T I Y S Y L E D R 119
2870 TATAATTTAGAAAAAATAATTAAAGATTTGAAAATAGCTATA---CAGGAAAAATCTTTGAAT---AAAGAA---CAAGTAAAAAGCATT 2950
120 F R N S F T L S L L I D P I F E E G S M D Y K R T K Q K N E 149
2951 ATTGATGATATTCGTAAAAATTATGTTACTAAAGGGGTTAGTATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAGTCTTATGATTTT 3040
150 I D S V F N N D L V K W L - L N K D C L M I S Q W I A N E F 178
3041 CAA---TATGAACCTTTAAAACAAATTTGTAAAATTAAAAAAGATATTATTATAAATAAAGAACAAGAAAAAATTGTTATAGATTCTAAA 3127
179 Q K R K G L K E V C K T I E K C F D Y I K T E G I D L K Y R 208
3128 TCATCTTATGAAGAAAAATTGAAAAATTTAGAAGAAAAAATGTCAATAGCTCTTAAAAATATAAATAATTTTCTTGAAAAAAATAAAGAT 3217
209 L D G I K I T C S G R F K M T D N E K R R N K - M A R I K T 237
3218 TATACTAAAGAATTTCTTGAAGCAAAAGAATTACAAGAATGGTATGATTATTTTCAGAATAGAGGAGCATTAAAAAAATTATCAAAACAA 3307
238 F K K G Q I P L Q T L S K Y I N Y H M A T A Y T P D G T S G 267
3308 GAAAAA---GAAGTTTATGATAAATTATTAGAAATAAAAAATAAATATTTACCTAGCGAA 3364
268 I K I W I S Y E P R E I L D V G L T G E 287
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 56947
Protein: lcl|KC353356.1_cdsid_AGH24272.1 [gene=rpl16] [protein=ribosomal protein L16] [protein_id=AGH24272.1] [location=24975..25388] @ 0
DNA length: 822 Protein length: 137
1 Nt shifts: 5 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
56948 TTGACTTAAAGCAAGAGATATTTATCTTATGAACAGTTAGAGACTGCACGTAGAGTT---ATA---CA-CGTTTA---GTTAAGCTAAAG 57027
1 M V R P K R - T K Y R K C Q K G R V G G I D P R S D V H F G 29
57028 AGCTTAAAAATAAAAAGAATTAACAATACTTAAAAGTATCAACAAAAATTCAGTGAC---AGACTAGAAGACCTAGAGTAAACAAAAAAA 57114
30 S Y G L K A L E P C R I T E R Q I E A C R V A I T R K I K R 59
57115 ATT------CTCTATATTCGATCTAACTATGC-TTACCTCTACA-AAAAAACCTTTACAAGTTAGAATGGGAAAGGA-AAAGGGTCAATA 57195
60 I G K V W I R I F P D I P V S S K P T E V R M G K G K G A V 89
57196 GATAAATGGGTTTTTGCTGCTAATAAATTAGAG---TTATTTTGAAATGACTCGACAAGATTTAAACTACGTAAAGTACATCGTTTATTA 57282
90 D Y W M C R V K A G K I M F E I D G V S M E L A K R A L E L 119
57283 AGTGTTTCCGTGTTAAAATG-CCGACAAAACTAAAAATAATTATCATCGATTACATA 57338
120 G A S K L P V P T T F - V M K K K Y I 137
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1667
Protein: lcl|KC353356.1_cdsid_AGH24273.1 [gene=rpl14] [protein=ribosomal protein L14] [protein_id=AGH24273.1] [location=25468..25836] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
1668 ATGATACCAGTACAA---ATGCAAGATATACCTGTTAAATCCAAAGAGCCTAAAATAGAATATCCTAGAAGACCTAATATTGATCTTAAA 1754
1 M I Q V E T M L K V A D N S G A K R V Q C I K I L G G S R R 30
1755 CGTGAA---ACAATTATCCCTAGATTTGAAATTGAAACT---GAAACAATACCACCTACAATAGTAAATCCACCGGATGTTATTAATAAT 1838
31 R Y G S V G D T I V V A I K E C L P K K K V K K G D V K K A 60
1839 GATTTACCT---TTTGAAGAACCTGTTGAGGAGCCTATTGAAATAAAAGTAGAATTTTTTAATGCTTATACGGATCTTATGAATATAGAA 1925
61 I I V R T K K P I H R K D G S S I S F E N N A V V L I N E Q 90
1926 GATGTAGAT------AGT---GTAATTTCTCCAAGTTTTGAAGGCTCTCGTATTTATAGTGACGATGCAATTTTTCAGTTACATTTAGAT 2006
91 G I P I G T R I L G P V T K E L R K K K M V R I I S L A S N 120
2007 ATTACT 2012
121 V L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2341
Protein: lcl|KC353356.1_cdsid_AGH24273.1 [gene=rpl14] [protein=ribosomal protein L14] [protein_id=AGH24273.1] [location=25468..25836] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.07
2342 TTTTACAAAACAATGATCTTATATCAGAAAATTCAACATACTAATTTTTTTACAAATAAA---ATTTCTTATAGTAATTTTATCCGTTTT 2428
1 M I Q V E T M L K V A D N S G A K R V Q C I K I L G G S R R 30
2429 TATCCTGGCAATTTAGGGAAAACACAACCAAAATCTATTAAAGAA---ATGCCTGAGAGTAAAACACCTCAA---GAAATTACAAAATAT 2512
31 R Y G S V G D T I V V A I K E C L P K K K V K K G D V K K A 60
2513 TTTCCATCAGGTACAACATTACAAGATCTTGAAGAAGTTGCACAAGATGTAATGTATCCCAAAGAAATGTCTAGTATTCCTACTGAAAAA 2602
61 I I V R T K K P I H R K D G S S I S F E N N A V V L I N E Q 90
2603 AGTGAAGAACCAATTAAATCTGCAGCAGTTAAAGAAGAAGAAAAAAAAATA---ATAGAAAAACTTATAGAAGCTGATACTATAGCGGAA 2689
91 G - I P I G T R I L G P V T K E L R K K K M V R I I S L A S 119
2690 AAAATACAA 2698
120 N V L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2773
Protein: lcl|KC353356.1_cdsid_AGH24273.1 [gene=rpl14] [protein=ribosomal protein L14] [protein_id=AGH24273.1] [location=25468..25836] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.06
2774 AATGTTGAATTTAAATTCCATAAACCTGAGTCTGATAATTATACAGTGCCTATTACAGCCGTTTATGATACAAAACAAGGATCATCCGAT 2863
1 M I Q V E T M L K V A D N S G A K R V Q C I K I L G G S R R 30
2864 ATTCAATATAATTTA---GAAAAAATAATTAAAGATTTGAAAATAGCTATACAGGAAAAATCTTTGAATAAAGAACAAGTAAAA---AGC 2947
31 R Y G S V G D T I V V A I K E C L P K K K V K K G D V K K A 60
2948 ATTATTGATGATATTCGTAAAAATTATGTTACTAAA---GGGGTTAGTATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAGTCTTAT 3034
61 I I V R T K K P I H R K D G S S I S F E N N A V V L I N E Q 90
3035 GATTTTCAATATGAACCTTTAAAACAAATTTGTAAAATTAAAAAAGATATTATTATAAATAAAGAACAAGAAAAAATTGTTATAGATTCT 3124
91 G I P I - G T R I L G P V T K E L R K K K M V R I I S L A S 119
3125 AAATCATCT 3133
120 N V L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4219
Protein: lcl|KC353356.1_cdsid_AGH24273.1 [gene=rpl14] [protein=ribosomal protein L14] [protein_id=AGH24273.1] [location=25468..25836] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.11
4220 TTATATTCACTTCTTATTAAAAGTCACGAAGACTATAATAAGGAAATAGATCGCCTTAATGAATTAAAAACAAATTATTTGAAAGATAGA 4309
1 M I Q V E T M L K V A D N S G A K R V Q C I K I L G G S R R 30
4310 AAATATAAACAATATTTTAATTCATTAACAGATGAAGAACAAAAATTAGTTTCTCATATAAAAATTTTTCAAGATAAGATTAAAGATGAT 4399
31 R Y G S V G D T I V V A I K E C L P K K K V K K G D V K K A 60
4400 AATATACAAAATGAAAAAAAA------CAAAAGAAAGAACTTATTAATCAACTTTTGGAAAAAAATAAAAAAGGAAAAGATAAAGAAGAA 4483
61 I I V R T K K P I H R K D G S S I S F E N N A V V L I N E Q 90
4484 GGAACAGAAATTTTAACTGCAAAACAAAAAAAG---GAGAAATATCTAAAGGATAAACAAAATATAAATAATATCGATGAAAAGAATAAT 4570
91 G I P I G T R I L G P V T K E L R K K K M V R I I S L A S N 120
4571 TGATTA 4576
121 V L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6526
Protein: lcl|KC353356.1_cdsid_AGH24273.1 [gene=rpl14] [protein=ribosomal protein L14] [protein_id=AGH24273.1] [location=25468..25836] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.08
6527 TTGATCACCGTTCAATGTCTTTTT---CTAAAAGAATTTCGAATCCACAATGTCGTAAATTGCGTCAACAATGTAAACAGCAT-CATAAT 6612
1 M I Q V E T M L K V A D N S G A K R V Q C I K I L G G S R R 30
6613 AAATAT------ATTACTGATACAAAAATACAAACTAGACATAGAGGTTTAAGCAATAGAGAATTACAA---GGT---ATTCGATCTCCA 6690
31 R Y G S V G D T I V V A I K E C L P K K K V K K G D V K K A 60
6691 TTGAGTAGTAAAAAGTTTAAGGAGGTAAATAATATTGATATGAAAAAT---CCTTTTCAAAACTCACAAAAAGTG------TCAGAACCT 6771
61 I I V R T K K P I H R K D G S S I S F E N N A V V L I N E Q 90
6772 TTTTCACCTCTT---ACAAGTATAACTAAAACCTGTAAAACAACATTTAAATCCTTTATTAAAAAAGATTCATTATCAATTGCCTCTAAC 6858
91 G I P I G T R I L G P V T K E L R K K K M V R I I S L A S N 120
6859 CAAATA 6864
121 V L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6669
Protein: lcl|KC353356.1_cdsid_AGH24273.1 [gene=rpl14] [protein=ribosomal protein L14] [protein_id=AGH24273.1] [location=25468..25836] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.09
6670 TTACAAGGTATTCGATCTCCATTGAGTAGTAAAAAGTTTAAGGAGGTAAATAATATTGATATGAAAAATCCTTTTCAAAACTCACAAAAA 6759
1 M I Q V E T M L K V A D N S G A K R V Q C I K I L G G S R R 30
6760 GTGTCAGAACCTTTTTCACCTCTTACAAGTATAACT---AAAACCTGTAAAACAACATTTAAATCCTTTATTAAAAAAGAT---TCATTA 6843
31 R Y G S V G D T I V V A I K E C L P K - K K V K K G D V K K 59
6844 TCAATT---GCCTCTAACCAAATACCATTGCCTGAGAGTATAAATAACACAATAAGTCACGAAAATCAAAATATAAATCTT---AGTGAT 6927
60 A I I V R T K K P I H R K D G S S I S F E N N A V V L I N E 89
6928 CCTACATTTCCAATACCTCCATTGCATTTTGGT---ATTACTAATGATACCCAACATACCCCGTCTACTACTGTTTTAAATGATTTCTCT 7014
90 Q G I P I G T R I L G P V T K E L R K K K M V R I I S L A S 119
7015 AAAATAGAT 7023
120 N V L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 38980
Protein: lcl|KC353356.1_cdsid_AGH24273.1 [gene=rpl14] [protein=ribosomal protein L14] [protein_id=AGH24273.1] [location=25468..25836] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 10 ||| 2 Nt shifts: 0
Score: 60 Length-adjusted: 0.49
38981 AAATATGCGATTGGTACAGTTGTTAAAGTAGCGAT-AATTCCGGTCC-ATGTTCCTTCGAATAATAAAAATATTAAGATTCATCCT-CAA 39067
1 M I Q V E T M L K V A D N S G A K R V Q C I K I L G G S R R 30
39068 GC-TACAGCAAAATTGGTGATCATGTTGTAGGTTTGTATTATATACTCATAACAGATGAAATTTAAAGTGAAAAAGGTTCTTT-AGTCGT 39155
31 R Y G S V G D T I V V A I K E C L P K K K - V K K G D V K K 59
39156 GCTATTTGTATAGAATAGCAAATTCTCATTTACGATAGA---TGGACAACGATAAGGTTTCAATATCCTGCTGTTGC-ATTATTAC-AAA 39240
60 A I I V R T K K P I H R K D G S S I S F E N N A V V L I N E 89
39241 AAAGGCGTTCCAAGAGGAACAAAAATATTTGGCCT-TTACCTAAAGAATTGCGTGAGAAGGTTAT-ATTCGTTT-ATGTCTTTGGGTACA 39327
90 Q G I P I G T R I L G P V T K E L R K K K M V R I I S L A S 119
39328 TCGCTTTAT 39336
120 N V L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45893
Protein: lcl|KC353356.1_cdsid_AGH24273.1 [gene=rpl14] [protein=ribosomal protein L14] [protein_id=AGH24273.1] [location=25468..25836] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.12
45894 CTTATCAAAAATGCTAGGCAACTCAAGAATCCTGAAAAAAAATATCTATTTTCTGTATAT---ATTCTTGTTAGCGGTAAAAGAGCTAAC 45980
1 M I Q V E T M L K V A D N S G A K R V Q C I K I L G G S R R 30
45981 GTGTTACCTTCCGAAGCGAAAATATTAATATCTGATGCCCTGGACGAATTAAACGATTCAAAATTGGCTAAGATTGGGGATAAGAAATAT 46070
31 R Y G S V G D T I V V - A I K E C L P K K K V K K G D V K K 59
46071 ACTATACTAAAAAGAGTCCTTAAACGTTTTGAAAGTATACGT---ACTCGTTTATCGAAAGTTTTAAACGGCTCCGAATTTTCGGATACC 46157
60 A I I V R T K K P I H R K D G S S I S F E N N A V V L I N E 89
46158 ATAGCCAATGACACAGGTCATGTTAAGAAATCTATTATGAATTTAATACTTCGCAGCAAAGATCAAAAACCATTTACATCATTTAATATA 46247
90 Q G I P I G T R I L G P V T K E L R K K K M V R I I S L A S 119
46248 AATATTCTA 46256
120 N V L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46241
Protein: lcl|KC353356.1_cdsid_AGH24273.1 [gene=rpl14] [protein=ribosomal protein L14] [protein_id=AGH24273.1] [location=25468..25836] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.16
46242 AATATAAATATTCTAACTATAGCAAAACGTATCAAGGATTATGTTATTAATGATAATGAT---ATT---CTTATGAATACGGATAAAGAT 46325
1 M I Q V E T M L K V A D N S G A K R V Q C I K I L G G S R R 30
46326 AAATTGGCTCAAGCTATTGAAAGTGCTAAACTT---ATTGATTTATCTAAACCTAAAAAATCTAAAAATAAAATAGATCCTTCTAAAGCT 46412
31 R Y G S V G D T I V V A I K E C L P K K K V K K G D V K K A 60
46413 GTTGTTAATACTACTAGTAAAAAGAAAAATAAAAGGGGTTCCACCCCTGCTAGCATAGCTAAAGCTGTCGCTTCTGATAATAATCCTATT 46502
61 I I V R T K K P I H R K D G S S I S F E N N A V V L I N E - 89
46503 AATAATATTTAAAATTATGATATCTACATTACCAATTTATAAAATTCGAAAGCATTTAGATATAAAAAAATGATAAATAACATAAAGAGT 46592
90 Q G I - P I G T R I L G P - V T K E L R K K K M V R I I S L 117
46593 ATTTTAAATAATTTA 46607
118 A S N V L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62356
Protein: lcl|KC353356.1_cdsid_AGH24273.1 [gene=rpl14] [protein=ribosomal protein L14] [protein_id=AGH24273.1] [location=25468..25836] @ 0
DNA length: 642 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.13
62357 CAAAGCACTATTTTTTCAGCACTAATGGCTAAATATGTTGTATCTTATTATAATTTGAATTCAAAAGATATTATTGTTAATAGTACACCA 62446
1 M I Q V E T M L K V A D N S G A K R V Q C I K I L G G S R R 30
62447 TTATATTTAACA---AAAGAT---ATTTCTCCTGAAATAAAGGCCAGCATGGAATTTAATAAAAATTTAACAGGAAATTCGTGTCCTGAT 62530
31 R Y G S V G D T I V V A I K E C L P K K K V K K G D V K K A 60
62531 ATTACTTTAAAA---GAACATCCTTATGATTTTAAAGATTCAAAGGATATAAAATGGAATAAAAATCAGATTTATTTGGTTGATAATACT 62617
61 I I V R T K K P I H R K D G S S I S F E N N A V V L I N E Q 90
62618 AGTTTTAATGAACAGGCTATAATAATGTTAAATCATTTGGAAAAATCTTTGATTAATCAATTAACTGTTAATCATTTGATGTCTAGTGAA 62707
91 G I - P I G T R I L G P V T K E L R K K K M V R I I S L A S 119
62708 TGTGTTCTT 62716
120 N V L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 1552
Protein: lcl|KC353356.1_cdsid_AGH24273.1 [gene=rpl14] [protein=ribosomal protein L14] [protein_id=AGH24273.1] [location=25468..25836] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
1553 GCATTAAAAAATTCTACTTTTATTTCAATAGGCTCCTCAACAGGTTCTTCAAAAGGTAAATCATTATTAATAACATCCGGTGGA------ 1636
1 M I Q V E T M L K V A D N S G A K R V Q C I K I L G G S R R 30
1637 ---TTTACTATTGTAGGTGGTATTGTTTCAGTTTCAATTTCAAAT---CTAGGGATAATT---GTTTCACGT------TTAAGATCAATA 1711
31 R Y G S V G D T I V V A I K E C L P K K K V K K G D V K K A 60
1712 TTAGGTCTTCTAGGATATTCTATTTTAGGCTCTTTGGATTTAACAGGTATATCTTGCATTTGTACTGGTATCATATCATTAATATCATCA 1801
61 I I V R T K K P I H R K D G S S I S F E N N A V V - L I N E 89
1802 GAAGGGAAATATGAGGCTTCATCTTGAGAAGGTTGATAATCAGCTGAAGTATCTAAACTATATTTCACCAAAATAATATCTTTAACTACC 1891
90 Q G I P I G T R I L G P V T K E L R K K K M V R I I S L A S 119
1892 GAATATTTA 1900
120 N V L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 50458
Protein: lcl|KC353356.1_cdsid_AGH24273.1 [gene=rpl14] [protein=ribosomal protein L14] [protein_id=AGH24273.1] [location=25468..25836] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
50459 ACAACCGAACCCTTGAGGCCCTTTTCAGTCTCAGATGTGATGAGCCGACATCGAGTGCCAAACAATTCCGTCATAGGT---ACTCTAAGG 50545
1 M I Q V E T M L K V A D N S G A K R V Q C I K I L G G S R R 30
50546 AATTATCACCTGTTATCCCCGGATACCTTTTATTCGTTGGCA---ATCCTA---CGCCCACAGGTTAAGATTGGA---TTACTAGGACCA 50626
31 R Y G S V G D T I V V A I K E C L P K K K V K K G D V K K A 60
50627 TTTAAAAATAAATCCCTGAATGAATTGTCATTCAAACAGTCAACAAGTATTAGCCCTTGCGCTAT-CGTGTAATAAATCTAAACGTAACA 50715
61 I I V R T K K P I H R K D G S S I S F E N N A V V L I N E Q 90
50716 AATCTTTTGTACGCACTCCGTTACATTTGGGAGGCTACCGCCCCAGTCAAACTAACCACTTTCATTAAAAATTTTTAGACCATAGTAATA 50805
91 G I P I G T R I L G P V T K E L R K K K M V R I I - S L A S 119
50806 AATGTTTCG 50814
120 N V L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6613
Protein: lcl|KC353356.1_cdsid_AGH24274.1 [gene=rpl5] [protein=ribosomal protein L5] [protein_id=AGH24274.1] [location=25870..26418] @ 0
DNA length: 1092 Protein length: 182
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.06
6614 AATATATTACTGATACAAAAATACAAACTAGACATAGAGGTTTAAGCAATAGAGAATTACAAGGTATTCGATCTCCATTG-AGTAGTAAA 6702
1 M N R L K K H Y E E I I R F D M I R K F N Y I N P H M I P K 30
6703 AAGTTTAAGGAGGTAAATAATATTGATATGAAAAATCCTTTTCAAAACTCACAAAAAGTGTCAGAACCTTTTTCACCTCTTACAAGTATA 6792
31 L D K I V V N M G V K E A A L D K K Q I L A P L L I L E L I 60
6793 ACTAAAACCTGTAAAACAACATTTAAATCCTTTATTAAAAAAGATTCATTATCAATTGCCTCTAACCAAATACCATTGCCTGAGAGTATA 6882
61 T G Q - K A I I T K - A K K - S I S N F K I R K G F P I G V 87
6883 AATAACACAATAAGTCACGAAAATCAAAATATAAATCTTAGTGAT---CCTACATTTCCAATACCTCCATTGCAT---TTT---GGTATT 6963
88 S V T L R G D N M Y E F L S R L I T V V L P K I R D F K G I 117
6964 ACTAATGATACC---CAACATACCCCGTCTACTACTGTT---TTAAATGATTTCTCTAAAATAGATAATACTTCTTCAAGCGTAAAACCA 7047
118 P M T S I N K D G N L A I G I K D L L V F P E I E S E Y D K 147
7048 ATTCCTGAATTAAAAAATCCAGACGGTGTTATATATACTACTAATATTACTGAAAAAACAAGTATGGAAGAATTAACCAAGCAGCAACTT 7137
148 F N R V Y G A N I V L V T T A K T K K E A G V L L S G F Q I 177
7138 ATTGATGAATTAAAA 7152
178 P L K I R 182
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 618
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.05
619 AAATTTACTCAATATTTTAAATTACAAGTAATTAAAAGACATCTTTACTTAATAGGAATACCATTAAATAATAATTGGTATTCAACCGTT 708
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
709 CATCGAAAGTATTTATGGCCTTTAGCAAATTCTTTT---CTTAAAATAAGTATAAAACATAAAATTGAGTTATTGTATAAAAAATATTAT 795
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
796 TTTGATAAA------AAGCCTCATAAACCAAGACCT---GATAATTTTTTTTCTTTATCTGAA---GAGGCAAAAATTTTATTTTTTAAA 873
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
874 AATAAT---CCTACATTACCTGAATTACTTTTT 903
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 618
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.06
619 AAATTTACTCAATATTTTAAATTACAAGTAATTAAAAGACATCTTTACTTAATAGGAATACCATTAAATAATAATTGGTATTCAACCGTT 708
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
709 CATCGAAAGTATTTATGGCCTTTAGCAAATTCTTTT---CTTAAAATAAGTATAAAACATAAAATTGAGTTATTGTATAAAAAATATTAT 795
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
796 TTTGATAAAAAGCCTCATAAACCAAGACCTGATAATTTTTTTTCTTTA---TCT---GAAGAGGCAAAAATTTTATTTTTTAAAAATAAT 879
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
880 CCTACATTACCTGAATTACTTTTTCATAAATAC 912
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2462
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.05
2463 CTATTAAAGAAATGCCTGAGAGTAAAACACCTCAAGAAATTACAAAATATTTTCCATCAGGTACAACATTACAAGATC---TTGAAGAA- 2548
1 M I T S H F S M K D - K K R R F L Y S K Y E W K R L Q L K S 29
2549 GTTGCACAAGATGTAATGTATCCCAAAGAAATGTCT---AGTATTCCTACTGAAAAAAGTGAAGAACCAATTAAATCTGCAGCAGTTAAA 2635
30 I A D N M L L P M E V R F K A R L E I N E L P K D S S K V R 59
2636 GAAGAAGAAAAAAAAATAATAGAAAAACT-TATAGAAGCTGATACTATAGCGG-AAAAAATACAAGGTAATTCTCATATTTTTAATCCA- 2722
60 I R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A 89
2723 TTAAGATTAGTTTATAACACCAGTAGTAAAGTATGG 2758
90 Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2971
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
2972 TATGTTACTAAAGGGGTTAGTATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAGTCTTATGATTTTCAATATGAACCTTTAAAACAA 3061
1 M I T S H F S M K D K K R R F - L Y S K Y E W K R L Q L K S 29
3062 ATTTGT---AAAATTAAAAAAGATATTATTATAAAT---AAAGAACAAGAAAAAATTGTTATAGATTCTAAATCATCTTATGAAGAAAAA 3145
30 I A D N M L L P M E V R F K A R L E I N E L P K D S S K V R 59
3146 TTGAAAAATTTAGAAGAAAAAATGTCAATAGCTCTTAAAAATATAAATAATTTTCTTGAAAAAAATAAAGATTATACTAAAGAATTTCTT 3235
60 I R N - R C I M T G R P R G V Y R Y W R L S R I K I R E L M 88
3236 GAAGCAAAAGAATTACAAGAATGGTATGATTATTTTCAG 3274
89 A Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3112
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.13
3113 GTTATAGATTCTAAATCATCTTATGAAGAAAAATTGAAAAAT---TTAGAAGAAAAAATG------TCA---ATAGCTCTTAAAAATATA 3190
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
3191 ---AATAATTTTCTTGAAAAAAATAAAGATTATACTAAAGAATTTCTTGAAGCAAAAGAATTACAAGAATGGTATGATTATTTTCAGAAT 3277
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
3278 AGAGGAGCATTAAAAAAATTATCAAAACAAGAAAAAGAAGTT---TATGATAAATTATTAGAAATAAAAAATAAATATTTACCTAGCGAA 3364
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
3365 AAAGATTTTCAAGAA---AAAAATAGTAGTTAT 3394
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4186
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.11
4187 CTTCAACAGGATTATAAAGAACTACAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAAGACTATAATAAGGAAATAGATCGCCTT 4276
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
4277 AATGAATTAAAAACAAATTATTTGAAAGATAGA---AAATATAAACAATATTTTAATTCATTAACAGATGAAGAACAAAAATTAGTTTCT 4363
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
4364 CATATAAAAATTTTTCAAGATAAGATTAAAGATGATAATATACAAAATGAAAAAAAACAAAAGAAAGAACTTATTAATCAACTTTTGGAA 4453
61 R N R C I M T G - R P R G V Y R Y W R L S R I K I R E L M A 89
4454 AAAAATAAA---AAAGGAAAAGATAAAGAAGAAGGA 4486
90 Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4480
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
4481 GAAGGAACAGAAATTTTAACTGCAAAACAAAAAAAGGAGAAATATCTAAAGGATAAACAAAA-TATAAATA-ATATCGATGAAAAGAATA 4568
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
4569 ATTGATTATTTTTTAATAATATATTATTATTTATTATTATTTATAGGTCTAATAATGACATCTTGGATAATTTGGAGTAGATTTATTCGA 4658
31 A D N - M L L P M E V R F K A R L E I N E L P K D S S K V R 59
4659 TCTCGTACTATTAGAGAACTACCTGATTCTTTATTAACAGAATATCGCTTTTGGATTTTAATTTATATTTGTTGCATATATATATATAGT 4748
60 I R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A 89
4749 ATTAAAAATATTCTGAAGGCTTCAGGAGATAACTAT 4784
90 Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5027
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.07
5028 GAAATATTTTATAAATTTGTATTATTGGGCTTA---TTTCCTTTTATTTTT---AGATAT---TTTAAATAT---TCTTTAAAAGATGTT 5105
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
5106 TATGAACACTGGATTGTAGAATTGGAAAATAAATATTCGTTA---GTAAGAATTTATGAAGTTGGATATAAATTTGATGATTCTCGTAAA 5192
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
5193 AAAAATACAAAAGCTATTTATCATGATGAAGAAAAAACAATACGGGAATATATAGAAATTAAATTTAATAATATTATAGATTATTTACTT 5282
61 R N - R C I M T G R P R G V Y R Y W R L S R I K I R E L M A 89
5283 ---GATGAAGTTGATTATGAGTATGAATCAACTCCT 5315
90 Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5974
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
5975 ATGCTGGAAGAATTATATATTAAATACCTTGCAAAAGATGAAAAAGATTATGAAGGTTTT---ATGAAAGAAATTCAA---TCATTATTA 6058
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
6059 AAGGATTATCTTCTAAGACTTCAAGAAATGAAA---AAATTCAAAGAAAATATGAATAAATTCACCTTACGAATCACTGCAATATATGTA 6145
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
6146 ATTAGTAGTATTTTGTTACCTCATTTACCT------ATAACGTCATTATTT---TTAAACAGCATATATATATAT---CTATTTGCTAAC 6223
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
6224 AAATATTTAAAAGAATTTGAAGAACAAAGTTCG 6256
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6344
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
6345 ATGATTAATAAGAAAACACAAATTCAA---AAAAATAATTATTTAATAACGAGTAAGTATGA-TG-CGAACTTTAATACTTAATAAAAAA 6429
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
6430 ATA---AATAGCTTTCTGTATCTTTGTAAGCCGATAGTCATTCAAATATCTAAGCGTTTTTATCCCACTGATAAA---AAAATAGGT--- 6510
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
6511 CATGCTAAAAAATTGCTTGATCACCGTTCAATGTCT---TTTTCTAAA---AGAATTTCGAATCCACAATGTCGTAAATTGCGTCAACAA 6594
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
6595 TGTAAACAGCATCATAATAAATATATTACTGAT 6627
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6468
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 36 Length-adjusted: 0.36
6469 CAAATATCTAAGCGTTTTTATCCCACTGATAAAAAAATAGGTCATGCTAAAAAATTGCTTGATCACCGTTCAATGTCTTTTTCTAAAAGA 6558
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
6559 ATTTCGAATCCACAATGT---CGTAAATTGCGTCAACAATGTAAACAGCATCATAATAAATATATTACTGATACA---AAAATACAAACT 6642
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
6643 AGACATAGAGGTTTAAGCAATAGAGAATTACAAGGTATT---CGATCT---CCATTGAGTAGTAAAAAGTTTAAGGAGGTAAATAATATT 6726
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
6727 GATATGAAAAATCCTTTTCAAAACTCACAAAAA 6759
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7203
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.22
7204 GAAAGTGATGGTCATATACGTATTGGTAATAAAGATAATGATTTAATATTTACGAAACACGGGCGAGCGTATTTAGAATTACAGCCAAAA 7293
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
7294 AGTCAAATTTTTATAAATCCTTTAGAAATCACC---AAAGAAAATATTACTCTTGATGATTTAAATAATTTTTGTATTATTGTACCAAAA 7380
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V - R 59
7381 AATTATGAGGATGATCTTATAAAAGCCTCGCCACATATGATAGCAGCTTATGATCCTACTAATACTCATTTGTACGCATTTTCTACATTT 7470
60 I R N R C I M T G R P R G V Y R Y - W R L S R I K I R E L M 88
7471 ACAAGCGAAAAAGTT---GGTCTAAAAGTAAGTGATGAG 7506
89 A Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7444
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.09
7445 CTCATTTGTACGCATTTTCTACATTTACAAGCGAAAAAGTTGGT-CTAAAAGTAAGTGATGAGCAATTTAAAAAATTTCAAATGAAAAAA 7533
1 M I T S H F - S M K D K K R R F L Y S K Y E W K R L Q L K S 29
7534 ------CAAGGTATAGTATTTACTAAAGAAGAAGAATTAAAACCTCATAATAATAAATCCCAACAATTACGTTTTTTCAAAAATATACAA 7617
30 I A D N M L L P M E V R F K A R L E I N E L P K D S S K V R 59
7618 GTATTAGATAAAAATGAGGCTTATGTAGCCAAGTTTGATCAAGACTATTTTTTTACAATGAGT---CTTAATGTAAAAAAGGATTTAGTA 7704
60 I R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A 89
7705 GATAAT---TATAATAACTTAAAAACTAAACATTAT 7737
90 Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10795
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.12
10796 TTATTATTAAGT---TTTATATTATATGAGCATAGTTATCAATATTTAGTGAATTTTAGATATTTATGGATA---ATAAAAATATTATAT 10879
1 M I T S H F S M K D K K R R F L Y S - K Y E W K R L Q L K S 29
10880 TATACT---AATTTAATATTGGTAATATATATATTTATAATAATATATTTGTCAAGGAATACATTATATTTTATAACCGATAATATACAT 10966
30 I A D N M L L P M E V R F K A R L E I N E L P K D S S K V R 59
10967 ATATTCAATTTTGAACTTATTCAAGAATTTAGCCAAAAA---GAAAAATACGACTTTTTCATAAAATATTTAAATTATACCCTGTATATG 11053
60 I R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A 89
11054 GAACGAGAATTTCATTCTATACGTACATCAACCTTT 11089
90 Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10978
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.18
10979 GAACTTATTCAAGAATTTAGCCAAAAAGAAAAATACGACTTTTTCATAAAATATTTAAATTATACCCTGTATATGGAACGAGAATTTCAT 11068
1 M I T S H F S M K D K K R R F L - Y S K Y E - W K R L Q L K 28
11069 TCTATACGTACATCAACCTTTTTAAATACAATAATGTCTGATAAAAACTATTATGAAAATTTATTATTATCCCTAGATATTAATACAATT 11158
29 S I A D N M L L P M E V R F K A R L E I N E L P K D S S K V 58
11159 AAAGTATTGGCAAAAGAATTACTTACAATTGCTATTATAGTAGAAGATCGTTTTATAGAATTAGATGAAAAGCTAATGATTGAAACTATA 11248
59 R I R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M 88
11249 TCAGAA---TTGATAGAAGAACTCAGACAAGAGGAATTA 11284
89 A Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12477
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
12478 ATAGATTATTTATATTTTATGGAAAAATTAAAAGAAGAAACTACTATTAAATATATTTTAAATGATTTTGAACAAGTACCA---GAAGAG 12564
1 M I T S H F S M K D K K R R F L - Y S K Y E W K R L Q L K S 29
12565 TTAGTCAATAAACAAATAAATCAAATGTACTTACGTTTTAGTATAATACTAATATTACTTTTTATGACAATTTTTCTTTATGATGTT--- 12651
30 I A D N M L L P M E V R F K A R L E I N E L P K D S S K V R 59
12652 ATTAGATATTCTATAATAATAAAAATACTTAATTACAATATATATTCTTTTTTTATTCTATTGCCATTA---ATTTTTATATTATATTCA 12738
60 I R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A 89
12739 GCAACTAAAATTTTTACTTTGTCTAATACAGCTGAA 12774
90 Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12929
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
12930 ACTATAACTCAAATATATACTTCTCAAGAAAAAATTATG---TATTTGTT-TCATATTTCGAATACTGT---TTGTTTATTATTAATATG 13012
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
13013 GATATAAATATGAAAGAAAATTTAACTTATATCATAAGA---CAAATAGACTTTGAATATTTAATAACTGATTATATTAAACTTAA-AGA 13098
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K - V R 59
13099 TTTAAAAATTTATGTATATATGTTTATAGAAAATTATGTCTATTTAGAACTTTGTATCAATATTTTTATAACAAAATAATAACAGAAGTT 13188
60 I R N R C I M T G R P R G V Y R - Y W R L S R I K I R E L M 88
13189 GTACAA---GAATTTTCTTTATTGCATCAGTTATATTAT 13224
89 A Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14992
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
14993 GTTGCTCAAAAATTTTATAATGCTCATTTTATAAAAGATGCCATAATTTATCAACATTTTGAATATTTTTATCTTCCAATAGAA---ATA 15079
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
15080 AGCGGTGTTGGTCGCATA---CTAACAGTGTCACATATTTTAAGTTTTCAAACTAACAAGTTTGCAAGACCATTTCTTAATTATTTCATA 15166
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
15167 AAAAATAAAATTACTATGGATTTCGAAATATATGATAAAATGAAAGCACTTTTTGCAAATTATCTTTCAGCAGATTCTACATTACAAAAT 15256
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
15257 ATGAGCTTTGATTTATTTGAAAAACAAACTAAA 15289
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22498
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.06
22499 GTCAGGACGTCGTTATGATTTACCTGTACCGATAGTGAAAACCGTGCTATTTTTATGGCAATTGATTGGTTACGTAAAACTGTTTTTAAA 22588
1 M I T S H - F S M K D K K R R F L Y S K Y E W - K R L Q L K 28
22589 AATAATAAGAATGATCTTTCTTTACTTCA-CTCTTAGCACGTGAAATAGTGCTTCTTTACATATGAGGGATAGCTAAAGATTTCCTACGA 22677
29 S I A D N M - L L P M E V R F K A R L E I N E L P K D S S K 57
22678 GTT---ATATTGATA---TGCTATAGATCA---AGACCTTTTAGTAGATTTATAAGAAAAAACGGTTTAATGTTTCAAGTCAAAAAGAAC 22758
58 V R I R N R C I M T G R P R G V Y R Y W R L S R I K I R E L 87
22759 TATTATGCCTCACGCTTTGAGAAAATACGTGAATCTGTACGT 22800
88 M A Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 39797
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 54 Length-adjusted: 0.53
39798 TTCATAAAACGCTTATTTAGACTAAATGATTCCATATTACAAAATCAATA----AAAGATAAAAAACAAGTATGCAGTTTAAAGCGTAGA 39883
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
39884 AATGGAACGACGTTATTACAAGTT---ATGAAATTACAAGTA---CTAATATTGGCTTTATGCCCTACGTACACTTCGAAAGTTCAATTA 39967
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
39968 AAAAATTATGT-CTTATAACAGGTAGAGCACGTTA-ATTTATTCCAAAAAATTTAGAATTTCAAGAAC-CAAATAAAAGCTTATTTTACC 40054
61 R N R C I M T G R P R G V Y - R Y W R L S R I K I R E L M A 89
40055 TAT------ATTTCTGGATTACGTAACTCATCCTGG 40084
90 Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 43088
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
43089 TTATTAGTTTAGCACTTATGCACGTCCTTAAATAAATTATTGTTT---TTTAATATATTTCAA---AAGTCAATGCATTTTCAC---TTA 43169
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
43170 AGTTTCTTCCTTAATATGTATCATTATAAGAAATTTAAACGTTACGTGTTTATTACTAGGTTTCCGACTAATCTTGAAAAG---GAA--- 43253
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
43254 GAAAATGGATCTTTATTAATCGGTTCGCCATTAATACGAAGTGG-TATAAACGAATTAGACATTTAAAAAGACGATATTTATTAAAAATT 43342
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
43343 ATAAGAGCTAAA---TTTAAGAGACTT---TAT 43369
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45893
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 29 Length-adjusted: 0.29
45894 CTTATCAAAAATGCTAGGCAACTCAAGAATCCTGAAAAAAAATATCTATTTTCTGTATATATTCTT------GTTAGCGGTAAAAGA--- 45974
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
45975 GCT---AACGTGTTA---CCTTCCGAAGCGAAAATATTAATATCTGATGCCCTGGACGAATTA---AACGATTCAAAATTGGCTAAGATT 46055
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
46056 GGGGATAAGAAA---TATACTATACTAAAAAGAGTCCTTAAACGTTTTGAAAGTATA---CGTACTCGTTTATCGAAAGTTTTAAACGGC 46139
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
46140 TCCGAATTTTCGGATACCATAGCCAATGACACA 46172
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46571
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
46572 ATGATAAATAACATAAAGAGTATTTTAAATAATTTAAAACTGTTCGTAGGAACAAAATATCTTTTAAAAAGCGTACTTATATTTATATTT 46661
1 M I T S H F S M K D K K R R F L Y S K Y E W K R - L Q L K S 29
46662 ATTGCTGGCTTATATTATTTTTTTACTAAGTATACAGGAGCAACACCAGCGATTCCAGTAACTCAAATGCCTTCAATACTCAATCCTACT 46751
30 I A D - N M L L P M E V R F K A R L E I N E L P K D S S K V 58
46752 CATATTGCATATATTCAACAATTAGAAGCTTTTCAAGCAGCAACTTATGTTGAAGGGAAATTTTCAGTGTTAGAGGGTATTGAATATATA 46841
59 R I R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M 88
46842 CATAATAATCAA---CCACGATTAAATAGGGTTGAGGAC 46877
89 A Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62515
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 444 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
62516 AATTCGTGTCCTGATATTACTTTAAAAGAACATCCTTATGATTTTAAAGATTCAAAGGATATAAAATGGAATAAAAATCAGATTTATTTG 62605
1 M I T S H F S M K D K K R R F L Y S K - Y E W K R L Q L K S 29
62606 GTTGATAATACTAGTTTTAATGAACAGGCTATAATAATGTTAAATCATTTGGAAAAATCTTTGATTAATCAATTAACTGTTAATCATTTG 62695
30 I A D N M L L P M E V R F K A R L E I N E L P K D S S K V R 59
62696 ATGTCTAGTGAATGTGTTCTTTATACTAAAGATATTTTAGCAATTATGAAAAATAAAAGTACGAGCTCTGCTCAGGATATCTTTGAAAAA 62785
60 I R N R C I M - T G R P R G V Y R Y W R L S R I K - I R E L 87
62786 ATACAAAAGCATCTTTTAAGTAACCAACCACCAAAAGATTTT 62827
88 M A Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32929
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
32930 TATAAAGTACCGTTATTTACCTCTGAACAAAAGAAGCAAGTAGAAGGTTATCTTTCTGAGCATATAAACTTATTTGTAATTCAAGATTTT 33019
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S - 29
33020 ATTCTAAGTCATTATCAAGTGCCT---CCAACAACATTTACGGGTAATTTTCAAATATCCAAACTTATTAATAAACCTTTAGAC---AAG 33103
30 I A D N M L L P M E V R F K A R L E I N E L P K D S S K V R 59
33104 TTTTTTGGATCTACCTTATCAAATAATTCTTATTCACTTCTTATCAATTATTTAACA---AGTACAACTAAGATTATCTTCTTACATGTT 33190
60 I R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A 89
33191 GAAACACTAATTTCTCAAGCCCAGTCCTCTTCACTA 33226
90 Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33610
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.12
33611 GAACTTTATAATCGTCAGGTTATATCTCATGTGCATCCCGAGACTACACATACAGCCTTATTTCAAACGTATGTCCAAATAACAAGTTAT 33700
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
33701 CATGGAAAAACAACAATTCCAAATGCTTGTCAACTA---AGTCGCTTA---ATTAATAGTATGACGAAAAATACAACATTGTACTTTAAT 33784
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
33785 CGTCTAATTCTCTTAATAGATTTAGAGCCTATC---TTAATGAATGGTTTTCGTTTATCAAAACTTAATATACTGACTCCCATAGCAGAG 33871
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
33872 TATTATAATACTATGTTTTCCAATGCAGTATTA 33904
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33772
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.15
33773 CCGCTTAGCAAGAAGCAAAGTCAAAGAACCTCTCCGAATAAAAAAAGCTTATCACAACCGAAAAGGTATCAACTAGATTCCTTGCATGTA 33862
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
33863 ATACAAAATAAATTGAATCCACA-GATACAAGAGCAACTGCTTGCGTATACTAAAACGAA---CCACGAGA-AGTTACAAGAACTTTATA 33947
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
33948 ATCGTCAGGTT-ATATCTCATGTGCATCCCGAGACTACACATACAGCCTTATTTCAAACGTATGTCCAAATAACAAGTTATCATGGAAAA 34036
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
34037 ACAACAATTCCAAATGCTTGTCAACTAAGTCGC 34069
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 34333
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.08
34334 GAAGTTAATGCTTAATAAAGCTTTTCAACAAAGGTAAAAAGACCCTTATATGCCAACCAACTAATAAAGAGTGTGGATGTTTTATCT--- 34420
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
34421 GCGACTTCTTTAATAGGAGGGAG-TCTTTAAAGATAGATAAGGCTTTATACTTTCAGATGTTACAGCATTATTCACAAGTATGCAGAATA 34509
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
34510 CC-GAATTATGTATATTTGACGATGACCTATATGGGGCAATA---TAC---AATTTACAGGTAATCTTAGAAAGTGATATGCTTAAAAAG 34592
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
34593 ACTCTTATATCCTCGCGAGATAAAGAAGCATAT 34625
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 41963
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
41964 CTTATAATATATGGGTAATCGGCATTAAACCTTATATTCTTTTATATAAGGACGTCCTTT---TGGAAAAATATATCACGAAAATATGAT 42050
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
42051 TCCTTAAATATCTTTTTCTTTTCGACGTTTATTTTTTTTATACCAAATAACGTTTTATCTTTCTTTAAATTTTCTTCTAAGTTTACTATG 42140
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
42141 CGAAT-AAAGTAGGTTTTTTATATTTTCTTCGACCTTTATTTTTGTACGATAAAGTCTACCTCTACAAAAGTTTTAAGCATTAT---CAA 42226
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
42227 ---AAAATTACTTCA---TCTTACTCCGAATGG 42253
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44611
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
44612 TATATT---AATAATATTAGAGCATATGATAGTTTACCTTCTGAGTTATTTACGCGCAAACTTTTGAAAGGTGCTACAATGAAATTAGGT 44698
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
44699 TATTCACAAGGTCAAGAGTTTCGGGAGTTAGATTTTCAACAATATATTGAAGATTATTATTCATCTAAAGGATTTAATAAAGTACCCATA 44788
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
44789 ---GACTTTTCACGCATGTTGAATTTATTAAAAGCAATTTACGAGTGATATGGATGTTATCAAGATAAAGCTAAAATATTTATCCTGGGA 44875
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
44876 AATGAC---TCAGGT---AGAAAAACGAGTTAC 44902
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45560
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
45561 AGGTGGGCTAGACATATCAAATATAAAATTCTGCATAATGGTTTCGATCTTGTTAGGAAAAATTTCAAAATAACACAA---AAATTATTA 45647
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
45648 TTTCAAGAAATCTTGTATAAT---GAAACAAAGTTTTTTGCCAAATTAAAAGCTGCTAATCCTACACTGGATATCAGAAAATTTAAAATA 45734
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
45735 ATTCCTTTAACGATTTTGAAACGTTATTATCTTTCTGATAAATATAATTTTAAAGAAACAAAGTACTTAGCTCAACAACAGCAAGCATTT 45824
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
45825 TGTTTGTTCGAG---TATTACAAAAACGGTTAT 45854
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47761
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.16
47762 TTGGTAAAGGAATATTTATCAGCCTTGAAAGATAATAAAGATGAGACAGCATACAAAAGAATAATTCCACAAAATTGGAATGCAAAAACT 47851
1 M I T S H F S - M K D K K R R F L Y S K Y E W K R L Q L K S 29
47852 CGTCAAGAT---ATGATAACGTATTTGGACGTTTATATTTCCGAAGAAGAAGCTCTATTTGATAATCCTACTTACATATCTTCTAAGGAA 47938
30 I A D N M L L P M E V R F K A R L E I N E L P K D S S K V R 59
47939 AAGAAAATAAAA---CTTGAACTTAATTTGGGATTACAGATCCTTAAT---TGGTTGATAGATCTAAATATTCTTCAGGAAGAAATAGAT 48022
60 I R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A 89
48023 AAGCGTAATGTTCCTCATATT------ACATTTTGG 48052
90 Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 52290
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.07
52291 ATCATGCTTACGCATAGAAACACCCACATCTTCAATCGATATCGTAGTAGACCTTCAACAGAAAGAAGAAGGCTAACCAAATAAATGGCT 52380
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
52381 AACGAAAAGAAACCAATACAAAAATTGGTAAGGTTTTGCGCGGTATTCGAATTAAACCACATCTCCACCCCTTGTATAAGTCACCGT--- 52467
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
52468 CAATTCCTTTG-AGTTTAACCTTGCGGCCACATTCCCCAGGCGGTGTTTCACGCGTTAGCTTTAAACCCCCTAAATATATTGACTATATT 52556
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
52557 AAAGACGTTGAACACTCATTGTTTAAGGTATGG 52589
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 53132
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
53133 CACAGGACTTGCACCTGCACTCTGTCGATTAAAAGCCATAG-CATTACTATTTATGCTACGAGCCAAATAAAAGTCATATAGAA---TTG 53218
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
53219 TCGGGGCCTGGAATCGAACCAAGACCATAGGGTTATGAGCCCTGTATGCGAACCTTTACACTACCCCGAGATTTAACAAACATTAGTGCT 53308
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
53309 TTTCCGATTTCGTTAATCACGTCAATTTTGTATATTTTACTCTTTATACAGAGTTTACACAAAGTGCTTGCTAAAGTTGTAATTTTTAAT 53398
61 R N R C I M T G R P R G V Y R Y W R L S R I K I R E L M A Q 90
53399 AATGGT---CCAGCAGCAGATTCTTCTACCACT 53428
91 N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 61186
Protein: lcl|KC353356.1_cdsid_AGH24275.1 [gene=rps14] [protein=ribosomal protein S14] [protein_id=AGH24275.1] [location=26447..26752] @ 0
DNA length: 606 Protein length: 101
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.08
61187 ACCATGTGTACTTTCATAATGCTTATCCAAAAAGAATCAAAAAAGCCATCATCAAAGCCAAAAGG-CCACAGCTTCAGTTACAGCAA--- 61272
1 M I T S H F S M K D K K R R F L Y S K Y E W K R L Q L K S I 30
61273 ACCCAAGCATGCATACTTAAATAAGCGTTGTTCTTC---TGCCGATTACGGCTTAAACCAAAAACTAAGAACCAAAAACAATACCAACAC 61359
31 A D N M L L P M E V R F K A R L E I N E L P K D S S K V R I 60
61360 CGTACCAGCACCTGCTAATCCATTGTTGCTAAACCA---GCACCATACTTTTACCAGAAGTTAAATAGAATTTACAAAATCTTCTTTAAA 61446
61 R - N R C - I M T G R P R G V Y R Y W R L S R I - K I - R E 86
61447 GTCATGTT-TTAAATTTAACTTTTGGTTTTTGTTTGAGTTT-TGG 61489
87 L M A Q N K I P G L Q K S S W 101
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 345
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
346 CGTACCAATATATTAATTAAGGAAGATTTATTCGAATATGCTTTAAAAACAACTAAAGAAAAAATGATAAATATATGTATCATAACGTTA 435
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
436 TATATATTTACTTTTGTTATAGGTATATTTTATCTTAGA---TATATA---AATATAACA---AAAAAA---GTAGACTTAAAA---ATT 510
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
511 TATTATATAATGCTAAAA------AATCTTTTTACTGAATTTACAAAAGAAGAAATTATTTTAAATGTGGTAATAATAATAACTTTTATA 594
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
595 ATA---ATTTATATT---TTTATAATATATAAATTTACTCAATATTTTAAATTACAAGTAATTAAA------AGACATCTTTACTTAATA 672
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
673 GGAATACCATTAAATAATAATTGG 696
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1910
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.10
1911 CTTATGAATATAGAAGATGTAGATAGTGTAATTTCTCCAAGTTTTGAAGGCTCTCGTATT---TATAGTGAC---GATGCAATTTTT--- 1991
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
1992 CAGTTACATTTAGATATTACTGAATTTGTTACACAAAAAATAAGGGTTTCAACAGAAGATATATCTGTAACAATTATACGAAATACAGTC 2081
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
2082 CATGAATATTTTATAAAAAGTAATTTAAATAGTAATCTTACACCGTCTGATTTGCAAAACACTAAT---CATTTA---ATTAATTTATTA 2165
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
2166 CTTAAG---GAACTA---ATTGTCAATAGTTTTTTTGCCGCTGACAACGAAAGTTTTATAATGAAACAAATTGCAACA---TCCCTAATA 2246
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
2247 GTTGAAGTTTTAAGTAATTTAGAA 2270
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2653
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.11
2654 ATAGAAAAACTTATAGAAGCTGATACTATAGCGGAAAAAATA---CAAGGTAATTCTCATATTTTTAATCCATTAAGATTAGTTTATAAC 2740
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
2741 ACCAGTAGT---AAAGTATGGAATTACCTAAAAAAAAATGTTGAATTTAAA---TTCCAT---AAACCTGAGTCTGATAATTATACAGTG 2821
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
2822 ---CCTATTACA---GCCGTTTATGATACAAAACAAGGATCATCCGATATTCAATATAATTTAGAAAAAATAATTAAAGATTTGAAAATA 2905
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I - S L K L 89
2906 GCTATACAGGAAAAATCTTTGAATAAAGAACAAGTAAAAAGCATTATTGATGATATTCGTAAAAATTATGTTACTAAAGGGGTTAGTATA 2995
90 L N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L 119
2996 GAGAATGCTAATGAACTTTTAACTCTTTGG 3025
120 - G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3052
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
3053 TTAAAACAAATTTGTAAAATTAAAAAAGATATTATTATAAATAAAGAACAAGAAAAAATTGTTATAGATTCTAAATCATCTTATGAAGAA 3142
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
3143 AAATTGAAAAATTTAGAAGAAAAAATGTCAATAGCTCTTAAAAATATAAATAATTTT---CTTGAAAAAAATAAAGATTATACTAAAGAA 3229
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D - N K D 59
3230 TTTCTTGAAGCAAAAGAATTACAAGAATGGTATGATTATTTTCAGAATAGAGGAGCATTAAAAAAATTATCAAAACAAGAAAAA---GAA 3316
60 I I S V R - L K Y Y N N I S A I R N I Q R V I N K H I S L K 88
3317 GTTTATGATAAATTA---TTAGAAATAAAAAATAAATATTTACCTAGCGAAAAAGAT---TTTCAAGAAAAAAATAGTAGTTATTTGACA 3400
89 L L N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N 118
3401 CCTCTGAAAAAAAATAGTGCTTTACCTATTAAT 3433
119 - L G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3238
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.09
3239 GCAAAAGAATTACAAGAATGGTATGATTATTTTCAGAAT---AGAGGAGCATTAAAAAAATTATCAAAACAAGAAAAAGAAGTTTATGAT 3325
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
3326 AAATTA---TTAGAAATAAAAAATAAA---TATTTACCTAGCGAA---AAAGATTTTCAA---GAAAAAAATAGTAGTTATTTGACACCT 3403
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
3404 CTGAAAAAAAATAGTGCTTTACCTATTAATTTACAAAATGAAAAATCAGCTAAATGTTACTTGCCAAAAGATTATGTTATGGAAATAACA 3493
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
3494 AAT---ATAGAACGTGCTCTT---GAA---ATTTTAAATAAATCACAAACATTA---TCTATTAATGATCTTAAATTGTTATCCATTAAT 3571
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
3572 TCTTCGGCAGTTACTATAGATACA 3595
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3487
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.04
3488 ATAACAAATATAGAACGTGCTCTTGAAATTTTAAATAAATCACAAACATTATCTATTAATGATCTTAAATTGTTATCCATTAATTCTTCG 3577
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
3578 GCAGTTACTATAGATACAGAAGGTGTTATTAAAATATCACAAGAGGCGTATCAG---TCTTTTACTAAATATAAAGATAGCTTAGGATTT 3664
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
3665 AAATATTTA---TTAGAATATCCAAAAACAGAAGAAATATTATTACGTATAAAAGAAAGG---AATTTTTTTATTGCT---AAAAATATG 3745
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
3746 GATTCTAATCCTAATGGAATTATTGCTTTAGCTCACCTATCACATAATACATTAATTATTCCAAACCAAACCGAGAAA---AATTTATAT 3832
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
3833 GTTAGGGTAGGGCTTGTTACTAGT 3856
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3865
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.09
3866 GATTCTAATATTAAAATTGATAGTTATCAAGTTACTAATGAGGATTCTAATAAACAAAATAAAGATCAAATGTTTCGTATTTTTCCTACT 3955
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
3956 TTTTTAATTGTAGATGAGAAAATTGAGCCCTTAATAGTAAATCTTGAAATGACGTTGTATTTTTATGGCAAAAATACAGATAATAAAAGT 4045
31 K L N I D - I L N V L Y E E G Y I S D F E I K K N A D N K D 59
4046 ATTGTAGAA---GAAATC---ATATTTACGCAATATGATTTAACAAAAAATATATGGTCCGAAAATTATTACCAATATCCTTTTAATGTG 4129
60 I I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L 89
4130 ---GATCAAGAATTTTTACGTCAACTTTCTATTATTTTTTATAGTAATAAATTACAAGAACTTCAACAGGATTATAAAGAACTACAAGAT 4216
90 L N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L 119
4217 AAATTATATTCACTTCTTATTAAAAGT 4243
120 G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4697
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.07
4698 GAATATCGCTTTTGGATTTTAATTTATATTTGTTGCATATATATATATAGTATTAAAAATATTCTGAAGGCTTCAGGAGATAACTATCTT 4787
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
4788 AATTTAAAA---GATATTATAGAGATATTGTATGCACCTTTGAAAACTATAGATCATGCTATTAAATATAATAAATATATTAAACCTTAT 4874
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
4875 TATTACAAATTTGTGAGTAAATTTTATAACTTTACTGAAACAAAAAATATAAATGATGAC---CAGATACAAGTATTTGTCTTTTTTATG 4961
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
4962 CAGATATTTCCTAGAATTATCTTAGTTTCTATTTTAATGATAGATACATTTTATTTTAATAAATTAGAAATATTTTATAAATTTGTATTA 5051
91 N Q I D L G L V T Y I L S T S K G I F S G K E A - R R L N L 119
5052 TTGGGCTTATTTCCTTTTATTTTTAGA 5078
120 G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5295
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.12
5296 ATGAGTATGAATCAACTCCTTATTGTAAAAGTGAAGTCTATAATGAA-TATTGTTTAAATAAATATAAAAATAAAAAAGCTCTTTATACA 5384
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
5385 AGTGAAGATTTAGATATTTTGAGAGCCTTATATTGTGAGCTTATGCCAAATATTATTCATTTAAAAATGTTTTTATCTAGGATAGAAGTT 5474
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
5475 GTATCGGAAGTATCCTTAATGAAAACGTCAAAAATAGTAATATTTGGGGGGTATTTAGTATGTTGGGCTTATATATTAATTATAAGTTAT 5564
61 I S - V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L 89
5565 TATAATTATCCTATAGATTTAATTATGAGTAAATATCTTTTATTAAATTT-TATGTTATATTTGGTGA-AAGAAGAAAATCCATTTATGG 5652
90 L N - Q I D L G L V T Y I L S T S K G I F S G K E A R R L N 118
5653 ATTTCGATAGCGGTTCACATAATAAAAATC 5682
119 L G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5839
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
5840 AAAAATCATCAGGAAGTCTTTGAAAATTTTAGAAAAATACTTAAAGAAGGTTTGTTTAATATATTAGAAAAGTTGGATTGTCTTGAAGAT 5929
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y - 29
5930 TCACAAACAATGAAGGAAATAGTAGAAACATTTATGGATAATTTAATGCTGGAAGAATTATATATTAAATACCTTGCAAAAGATGAAAAA 6019
30 S K L N I D I L N V L Y E E G Y I S D F E I K K N A - D N K 58
6020 GATTATGAAGGTTTT---ATGAAAGAAATTCAATCATTATTAAAG---GATTATCTTCTAAGACTTCAAGAAATGAAAAAATTCAAAGAA 6103
59 D I I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K 88
6104 AATATGAATAAATTCACCTTACGA---ATCACTGCAATATATGTAATTAGTAGTATTTTGTTACCTCATTTACCTATAACGTCATTATTT 6190
89 L L N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N 118
6191 TTAAAC---AGCATATATATATATCTATTT 6217
119 L G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7884
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.16
7885 TTATTTCAACTACAAAATAA-AAA---ATGATAGATATTATTTCAAGGATAATAAATTTAATAATTAAAAATATACATCGTTTATTTCCC 7970
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
7971 GTATTTGGATTTATATTACTTTCATTATATATTTGGGGTAGGTATATAAGAAAT---AGATTACCACGAGAAATACCTTTT---GATTTA 8054
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
8055 ACATTATTACGTTTAATAATGTTAATTATAATATGTAGT---AGTTATATATAT---ATAATTTATAGGCTTATTAAACCTAAAGTACCA 8138
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
8139 CCTCAATTTATACTTAATGTTTTGGTATCTATTATAAATACTGTAAAATCT---TTTGACAATTAT---ACGAAACAATTTAATCTTATT 8222
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
8223 TCCAATACCTATATAAAAATATTT 8246
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8654
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.09
8655 GAGCAAAAAACACCTCATTTTTATTATATTATACGTCCAACAATAGAATGGTATAATAATTTATTTAAAGAATATAATGTTACCTGGAAA 8744
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
8745 TCTTGTGGA---GATATAAAAAACACCATTATCGAAAAGGATCTTAATTTAATAATTAGATTAAAAAGTATTATAACAACACATGAGATA 8831
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
8832 ATTACTAAATGGACAAATGTACAACAAAATATAAAAAATATTAGAATTATAATATAT---ATAGGATATTTAATATGCTGGGCTTATATA 8918
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
8919 TTATACGTAAGTTTATCAAATTTTAAAGATTTTTATATGTTATCATGTATAATTGAAGTGATAAAA---ACTCATCTTCTACAAGGTAAA 9005
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
9006 GTCCCACTAAAATTATGTATATTT 9029
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9664
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.17
9665 ATCTCTTACTTAAAGATGAAAATGAAAGTAATA---AATTTTATAAAC---AAAAAATGTTATTAATAAAAGATACTTATAATGTTTAAC 9748
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
9749 AAATTATTTTTC---ATATTACAGATATTAATAAAATTTAAATATTATTTCATGATATTTATTGTTTTAACACTAAGTTTATGTTTTGCA 9835
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
9836 ATTATTATACATTATAATTATAATAAAAATAAAAAACTACTAATTAATAAAAAACAAGAGCTTTCTAAACTATTAGATTATTTATATATC 9925
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
9926 AAAGATATAAAAATGGAAATATTAGATTTATTTTTATTAAACTTATTTACAATAGGATTGATTTTTTCCTTAAGAAATCTTAATATTGGA 10015
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
10016 GCAACCATAAATATTTTCTTATTT 10039
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10375
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 38 Length-adjusted: 0.30
10376 TTTCCTGAAATTTTATTATTTATAAGTTTGATATCTGATTTAAATAATAGAGAAATAAAAACATTTTATTATATCTTAGCTATATACCCA 10465
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
10466 ---TTA---ATGACATCTTATAGGACCATT---AAAGAA---ATTCTAGGAGACTATGATATGTTAAATATAAATGATAAATTAACTACA 10543
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
10544 TATTTTTATGAAGATAAAATACACGATAAATTGAGAAAAACAATAAGTGAATATGAACGTACTAGAATATTAATACAAAGTATGACTCTT 10633
61 I S V R L K Y Y N N I - S A I R N I Q R V I N K H I S L K L 89
10634 TATTATAAATATGATAAACAGATAAGAGAATATATATTAAGAGATTTCAAAAGAATATATCAGCCATATAGTATGCGTTTAATCTTTTTA 10723
90 L N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L 119
10724 GGAATATTAATATTATATTATAATTTT 10750
120 G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10375
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 38 Length-adjusted: 0.30
10376 TTTCCTGAAATTTTATTATTTATAAGTTTGATATCTGATTTAAATAATAGAGAAATAAAAACATTTTATTATATCTTAGCTATATACCCA 10465
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
10466 ---TTA---ATGACATCTTATAGGACCATT---AAAGAA---ATTCTAGGAGACTATGATATGTTAAATATAAATGATAAATTAACTACA 10543
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
10544 TATTTTTATGAAGATAAAATACACGATAAATTGAGAAAAACAATAAGTGAATATGAACGTACTAGAATATTAATACAAAGTATGACTCTT 10633
61 I S V R L K Y Y N N I - S A I R N I Q R V I N K H I S L K L 89
10634 TATTATAAATATGATAAACAGATAAGAGAATATATATTAAGAGATTTCAAAAGAATATATCAGCCATATAGTATGCGTTTAATCTTTTTA 10723
90 L N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L 119
10724 GGAATATTAATATTATATTATAATTTT 10750
120 G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12243
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.11
12244 TATTTACATATTTTATTATTA---AGTATAGTTATTATTTATGAGATAATTCATACTAATATGTATTATACTTATTATATGCTTTTTATT 12330
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
12331 ACTTACATAATTAATGTAATATATAAATATTATATTTTTGAGAAAAAAAAAGATTTTATGTTTGAT---GGCTTGCTTAATAAAAATTTT 12417
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
12418 TATAATGTACAATATTTTATATTTGCTAATAACAAAAGTACTTTAAACATGAAAACCAATATAGATTATTTATATTTTATGGAAAAATTA 12507
61 I S V R L K Y Y N N I S A I R N I Q R V I N K - H I S L K L 89
12508 AAAGAAGAAACTACTATTAAATATATTTTAAATGATTTTGAACAAGTACCAGAAGAGTTAGTCAATAAACAAATAAATCAAATGTACTTA 12597
90 L N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L 119
12598 CGTTTTAGTATAATACTAATATTACTT 12624
120 G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12318
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.13
12319 ATGCTTTTTATTACTTACATAATTAATGTAATATATAAATATTATATTTTTGAGAAAAAAAAAGATTTTATGTTTGATGGCTTGCTTAAT 12408
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
12409 AAAAATTTTTATAATGTACAATATTTTATATTTGCTAATAACAAA---AGTACTTTAAACATGAAAACCAATATAGATTATTTATATTTT 12495
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
12496 ATGGAA---AAATTAAAAGAAGAAACTACTATTAAATATATTTTAAATGATTTTGAACAAGTACCAGAAGAGTTAGTCAATAAACAAATA 12582
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
12583 AATCAAATGTACTTACGTTTTAGTATAATACTAATATTACTTTTTATGACAATTTTTCTTTATGATGTTATTAGATATTCTATAATAATA 12672
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
12673 AAAATACTTAATTACAATATATAT 12696
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13045
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.12
13046 ATAAGACAAATAGACTTTGAATATTTAATAACTGATTATATTAAACTTAAAGATTTAAA-AATTTATGT---ATATATGTT---TATAGA 13128
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
13129 AAATTATGTCTATTTAGAACTTTGTATCAATATTTTTATAACAAAATAATAACAGAAGTTGTACAAGAATTTTCTTTATTGCATCAGTTA 13218
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
13219 TATTATTTTATGCGAAATAGTATTGTAATATTAAGTGTTATCCAAACTGTAGTATCTTTTGTACAAAAGATTAATTTTATCCTTAAAATT 13308
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
13309 AATCAAGTAGAAGGTATTTATCTTACTGTAAAAATTATTTATGAAAAAGGTTTGCTTAAT---AAGATGACTGAAACA---CAATTAAAA 13392
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
13393 ---ACATTATTAGATATCATTTGG 13413
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13542
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.04
13543 ATGTCTAAATTCCAAATAATAGCATACGATATAGTAACTAAAATTTATAAAGCTCTTAAGAACACATCAATTACTACCACCGATCCTATT 13632
1 M T Q I Q S I - H S L I S N I K Q G Q K N - N L S N I N V I 28
13633 GTGAACACTTTTATTTATAAGAACGAACGTATTAATTTAGATAAAGAAGCATGCGAAAAGGCTTTTAAAATAATAACAACGATATTACAA 13722
29 Y S K L N I D I L N V - L Y E E G Y I S D F E I K K N A D N 57
13723 GAAGATGAAAAAAATTTAATTAAGAAAAAACAAACCACAACAAAATGGGAAAAAGTAATAAGAAAAGTAATATACGATGCAATT---ATG 13809
58 K D I I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L 87
13810 GAAGCACAAAAT---ATAGAAAAATCATCAATATCGAAT---TTCAATGGTAAAGAAATCTTTTTTACATTATTAAAAGAAGATCATATA 13893
88 K L L N Q I D L G L V T Y I L S T S K G I F S G K E A R R L 117
13894 AACATGATAAATACAATAATACAAAGAAATATT 13926
118 N L G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15349
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.04
15350 AGCTTAAGTTTTGATTATTTATCTAAAATGATACACATAATTAAAAATTATGCTAAAAAACCTGGGGAGATATTAAATATTCTT---AGT 15436
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
15437 ATTTTATATTATAAAGAAAAAAATGCTTTATATAACAATAGTGAACTTGTTATATTTTTAGATAGTACAATGAGCGGGTCTCAACATTTA 15526
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
15527 GCAACAATATTTAAAAATAAATTAGCAGCTAAAAATAGTTGTTTAATTTCTACAGATGAAACT---AAATTTGACTTAAATATTAATTGC 15613
61 I S V - R L K Y Y N N I S A I R N I Q R V I N K H I S L K L 89
15614 CTTGAAAAATTTCAGCTA---TTTATTACAAAAGCATTATCTGACGAAACTTCTAAGTATTTAGCTAAATTTGACATAAACCGTAATGAT 15700
90 L N Q I D L G L V T Y I L S T S K G I F S G K - E A R R L N 118
15701 TTATATGCATTGAATTTAGCAGAAATTTCT 15730
119 L G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15505
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
15506 ATGAGCGGGTCTCAACATTTAGCAACAATATTTAAAAAT---AAATTAGCAGCTAAAAATAGTTGTTTA---ATTTCTACAGATGAAACT 15589
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
15590 AAATTTGACTTAAATATT---AATTGCCTT---GAAAAATTTCAGCTATTTATTACAAAAGCATTATCTGACGAAACTTCTAAGTATTTA 15673
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
15674 GCTAAATTTGACATAAACCGT---AATGATTTATATGCATTG---AATTTAGCAGAAATTTCTAATTTA---CTTTGTAAAAAAATATTT 15754
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
15755 AATTCT---GAAATT---ACTATTTCATGTTTAAAGTCATATTTAAAAAAAATGGCTTTTAAATATGAAGTGACTCCTTGTGCAATTTCC 15838
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
15839 GATACTTATTCTTTTCCTGATTCT 15862
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24326
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.09
24327 TTGGTGGAATGT---ACTATTCTTGTTACCTTTTACGTCATTCCATTTGGT---AAGATTAATTTTACGTTCGCTTTTATACTTTTTTA- 24409
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
24410 AAAATTATGTTTAATATTATTGCTTATTTAAAAAACAAATTTACTTTCCTATCAGATTTATCAATTTATCAA---ATTTCAATTATATCA 24496
31 K L N I D I L N V L Y E E - G Y I S D F E I K K N A D N K D 59
24497 TTGGTACAATTTTATCATACACATTATAAT---TATAAAATTATAATAAGTTATGGTTTTCTTTTAGTG---CACAATAGTTTTCATATT 24580
60 I I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L 89
24581 TTCAAATCGCACCGTTTAGGTTTTATTGTT---ATCTTCTATTATAAATTATATTTCTTTTTGTGCACTAGACTTGGTAGTTTA---TTA 24664
90 L N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L 119
24665 GTTTATTTTATTATTATTATCTTTTGG 24691
120 G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34989
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
34990 GCAATCTTATTTTATTCATTACTTAAGACTAAGCTTAATTTATATCAATTACAGGTAAAAAACCTC------ATCTTGATTATAAGGAGA 35073
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
35074 ACGCTTAACGGTAAAGTACTTTCTGTTTTATTTGATAAA---AGAACAACATCCTTTGAAGTCAGATTTTATAAAGAATCAAAAAAGCTT 35160
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
35161 GATCAAATATTAGTGAAGTT-AGGTTAGAGATATAT---TTCAATATAACTTATAGGCTTGTGTATGCTCATAAAAAAGATCATTTGTTA 35246
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
35247 ---TTAATA---CTCTTTTTTAATACGTA-ATACTTTTGATCGTACTC---ATATGAATTGCATGCGAATTATTTTCT---CCTATAATT 35323
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
35324 GAAAGTATCATGTTCATTCTGCAG 35347
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45047
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
45048 TATGTTACAATATCGAATGTAGGTGCT---GTCCACAATATAAAAAGAGCATATCCCAAA---GTTTCAGATTTCTCTTGATTTAAAAAC 45131
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
45132 TCTACTAAC---GATTTATTTAAAATCTTTAAAAA-GAAGGATTCTAAAAA---TTTACGTTGAATTTCAATTTTATAAATAAAGGAATT 45214
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
45215 TA-TCGCTATCTGATAAATATCAGAA-GAT---TCTGA-ACCAATAACATCGCT---ATTATCTGTAGGCCACTTGATGTAGCATCCTTC 45295
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
45296 TCATATATCAGATTT---TTAAAATTCTTAGTTATTAAACTTTCTATTAAGATTTTTGCATATAATATATTTTTATTTTTTTTTTTACAT 45382
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
45383 GTGATTTTAACCATGATAATTTAT 45406
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46088
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
46089 CTTAAACGTTTTGAAAGTATACGTACTCGTTTATCGAAAGTTTTAAACGGCTCCGAATTTTCGGATACCATAGCCAATGACACAGGTCAT 46178
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N - V I Y 29
46179 GTTAAGAAATCTATTATGAATTTAATACTTCGCAGCAAAGATCAAAAACCATTTACATCATTTAATATAAATATTCTAACTATAGCAAAA 46268
30 S K L N I - D I L N V L Y E E G Y I S D F E I K K N A D N K 58
46269 CGTATCAAGGATTATGTTATTAATGAT---AATGATATTCTTATGAATACGGATAAAGATAAATTGGCTCAAGCTATTGAAAGTGCTAAA 46355
59 D I I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K 88
46356 CTTATTGATTTATCTAAACCTAAAAAATCTAAAAATAAAATAGATCCTTCTAAAGCTGTTGTTAATACTACTAGTAAAAAGAAAAATAAA 46445
89 L L N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N 118
46446 AGGGGTTCCACCCCTGCTAGCATAGCTAAA 46475
119 L G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46544
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.04
46545 AATTCGAAAGCATTTAGATATAAAAAAATGATAAATAACATAAAGAGTATTTTA---AATAATTTAAAA---CTGTTCGTAGGAACAAAA 46628
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
46629 TATCTTTTAAAAAGCGTACTTATATTTATATTTATTGCTGGC---TTATATTATTTTTTTACTAAGTATACAGGAGCAACACCAGCGATT 46715
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
46716 CCAGTAACTCAAATGCCTTCAATACTCAATCCTACTCATATTGCATATATTCAACAATTAGAAGCTTTTCAAGCAGCAACTTATGTTGAA 46805
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
46806 GGGAAATTTTCAGTGTTAGAGGGTATTGAATATATACATAATAATCAACCACGATTAAATAGGGTTGAGGACACCCATAGTTTACAA--- 46892
91 N Q I D - L G L V T Y I L S T S K G I F S G K E A R R L N L 119
46893 GGTGA-AA-ATACTTCTTATCATCTTT 46917
120 G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53675
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.20
53676 ATAAAATCTTTTGCTTCATTGGATACAATATTTGAAAATATTCGCTCTAATGAAAAATCCAATTTA---AATCTTAATTCTAAAAACGAG 53762
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
53763 AAAAATTTTAATGATACATTAAATCAACGTTATCTTTTGAATTCAGCTTTAAGTCCAATATATAAACTTAATTTACCTTCGCATGACATT 53852
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
53853 TCTTAAATCCGTATA---TATTTTAGATG-ATGAAATTAATCAAGATGTTATTGATAACATTGATGAAAATGAAGACCCGTCAATGGTCA 53938
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
53939 AATTATTTCTGTAAAGATGGTGTTGCTTTTGTT---ACAGGATT-GATAATATTCAAGTAGGTGAAATGGT-AGAATTTATTCTAAGGGT 54023
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
54024 TTAACGGTATGGCTCTTAATC--- 54044
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61792
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.17
61793 ATTACATATTTAAAAATAATACCTATAAAATTTGATAAAATTTCTTTA---ATTTTTGATAATTTACAAAATATTAATCTTATTAATTAT 61879
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
61880 GATTTTAATAAAAAAAACGAAAATATGATTTTATATCAATATGCTATAATTTTCCCTATGATTTATAAGGGAAATACAAAAAATTTTATT 61969
31 K L N I D I L N - V L Y E E G Y I S D F E I K K N A D N K D 59
61970 TGTAAAAAAATTACCATAAAAAATTTTATCCGTTTTTATCCA---GGTCATGTGAATAAAATTATCAATATTATTAATACTTCTCTAAAA 62056
60 I I S V R L K Y Y N N I S A I R N I Q R V I N - K H I S L K 88
62057 AAAGTATCACCACAAGCACTTATTGAACAAAATCGAATAGAAGCTAATAAAATGATTATTTATGCATTCTGCGAACATTTTAAA---AAT 62143
89 L L N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N 118
62144 GATAACTTATCTGATTTATTAGATGATCAC 62173
119 L G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61843
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
61844 TTTGATAATTTACAAAATATTAAT---CTTATT---AATTATGATTTTAATAAAAAAAACGAA------AATATG---ATTTTATAT--- 61915
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
61916 CAATATGCTATA---ATTTTCCCTATGATTTATAAG---GGAAATACAAAAAATTTT---ATTTGTAAAAAAATTACCATAAAAAATTTT 61996
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
61997 ATC------CGTTTT---TATCCAGGTCATGTGAATAAAATTATCAATATTATTAATACTTCTCTAAAAAAAGTATCACCACAAGCACTT 62077
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K - L 89
62078 ATTGAACAAAATCGAATAGAAGCTAATAAAATGATTATTTATGCATTCTGCGAACATTTTAAAAATGATAACTTATCTGATTTA---TTA 62164
90 L N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L 119
62165 GATGATCACAAAATTATTAATCGTATG 62191
120 G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 7079
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
7080 TGCGTACAAATG---AGTATTAGTAGGATCATAAGCTGCTATCATATG---TGGCGAGGCTTTTATAAGATCATCCTCATAATTTTTTGG 7163
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
7164 TACAATAATACAAAAATTATTTAAATCATCAAGAGTAATATTTTCTTTGGTGATTTCTAAAGGATTTATAAAAATTT-GACTTTTTGGCT 7252
31 K L N I D I L N V L Y E E G Y I S D F - E I K K N A D N K D 59
7253 GTAATTCTAAATACGCTCGCCCGTGTTTCGTAAATATTAAATCATTATCTTTATTACCAATACGTATATGACCATCACTT-TCTGTTTCA 7341
60 I I S V R L K Y Y N - N I S A I R N I Q R V I N K H I S L K 88
7342 ATAATAACTGCAGGAGATTTT---GTTATTTTTATCAAGTTACGTTTTTTTAATTCATCAATAAGTTGCTGCTTGGTTAATTCTTCCATA 7428
89 L L N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N 118
7429 CTTGTTTTTTCAGTAATATTAGTAGTATAT 7458
119 L G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 15528
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.09
15529 ATTAAAACTTTATCTGATATTATACATTTACATTCTTGCATAAAAGAATCAGGAAAAGAATAAGTATCGGAAATTGCACAAGGAGTCACT 15618
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I - N V I Y 29
15619 TCATATTTAAAAGCCATTTTTTTTAAATATGACTTTAAACATGAAATAGTAATTTCA---GAATTAAATATTTTTTTACAAAGTAAATTA 15705
30 S K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D 59
15706 GAAATTTCTGCTAAATTCAATGCATATAAATCATTACGGTTTATGTCAAATTTAGCTAAATACTTAGAAGTTTCG---TCAGATAATGCT 15792
60 I I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L 89
15793 TTTGTA---ATAAATAGCTGAAATTTTTCAAGGCAATTAATATTTAAGTCAAATTTAGTTTCATCTGTAGAAATTAAACAACTATTTTTA 15879
90 L N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L 119
15880 GCTGCTAATTTATTTTTAAATATTGTT 15906
120 G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32372
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
32373 TTTGAACAGAAAACAATATTATTTTTTATTCGCTTAAATGTAATTCATCACGCGACAGGATTGCTTTCAGATACTTCCAAGTTAATATTT 32462
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
32463 AATGAAAATATTACCAAATATCTCTCCAAAGGTATTCAACCAACAATTTATTGTGAACCGGTAATACAAGCATGGCTATCGTTTCCTTCA 32552
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
32553 ---GATTTAAGAAAGGCATTCATGAATGATGTACAACAAGCTTCTGATCCATCAACGGTAATCCAAGATCCGCTGTATTTAGACTCGATA 32639
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
32640 AAACAATTGGATATTCATCTATCTACATTC---TTGCATAATATGCGCAACCAATTC------CGCAATGCGTATACAATCCATAAAAGT 32720
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
32721 AATCTAAATCTGTTAAAGGTTAAT 32744
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32917
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.10
32918 CCTACGGATCTAACTTATTATTTTTATCTTATCAAACTAATGTTTTTTCCAGAAGAATCAGATAGTTATAAAGTACCGTTATTTACCTCT 33007
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
33008 GAACAAAAGAAGCAAGTAGAAGGTTATCTT---TCTGAG---CATATAAACTTATTTGTAATTCAAGATTTTATTCTAAGTCATTATCAA 33091
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
33092 GTGCCTCCAACAACA---TTTACGGGTAATTTTCAAATATCCAAACTTATTAATAAACCTTTAGACAAGTTTTTTGGATCTACCTTATCA 33178
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
33179 AATAATTCTTATTCACTTCTTATCAATTATTTAACAAGTACAACTAAGATTATCTTCTTACATGTTGAAACACTAATTTCTCAAGCCCAG 33268
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
33269 TCCTCTTCACTACGTCCACTCTTA 33292
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33682
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 40 Length-adjusted: 0.31
33683 AAGAAGCAAAGTCAAAGAACCTCTCCGAATAAAAAAAGCTTATCACAACCGAAAAGGTATCAACTAGATTCCTTGCATGTAATACAAAAT 33772
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
33773 AAATTGAATCCACAGATACAAGAGCAACTGCTTGCGTATACTAAA---ACGAACCACGAGAAGTTACAAGAACTTTATAATCGTCAGGTT 33859
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
33860 ATATCTCATGTGCATCCCGAGACTACACATACAGCCTTATTTCAAACGTATGTCCAAATAACAAGTTATCATGGAAAAACAACAATTCCA 33949
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
33950 AATGCTTGTCAACTAAGTCGCTTAATTAATAGTATGACGAAAAATACAACATTGTACTTTAATCGTCTAATTCTCTTAATAGATTTAGAG 34039
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
34040 ---CCTATCTTAATGAATGGTTTT 34060
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44534
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.05
44535 ATTAATAATATTAGAGCATATGATAGTTTACCTTCTGAGTTATTTACGCGCAAACTTTTGAAAGGTGCTACAATGAAATTAGGTTATTCA 44624
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
44625 CAA---GGTCAAGAGTTTCGGGAGTTAGATTTTCAACAA---TATATTGAAGATTATTATTCATCTAAAGGATTT---AATAAAGTACCC 44705
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
44706 ATAGACTTTTCA---CGCATGTTGAATTTATTAAAAGCAATTTACGAGTGATATGGATGTTATCAAGATAAAGCTAAAATATTTATCCTG 44792
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
44793 GGAAAT---GACTCAGGTAGAAAAACGAGTTAC---TCGACATCGTT-TCTCTGTGCCTAATACAAAAGCGAAGGAGAATGATATTATCA 44875
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
44876 AAAAATATTCGTATAGATTTAGTA 44899
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44860
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
44861 ATTTATCAGATA---GCGATAAATTCCTTTATTTATAAAATTGAAATTCAACGTAAATTTTTAGAATCCTTCTTTTTAAAGATTTTAAAT 44947
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
44948 AAATCGTTAGTAGAGTTTTTAAATCAAGAGAAATCTGAAACTTTGGGATATGCTCTTTTTATATTGTGGACAGCACCTACATTCGATATT 45037
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
45038 GTAACATATGAAACAATTAAGTTACAGATATCTTCTGAATTACGG------AAAACCATTATTAATTATCTTTTTTGTGTTAATAATTTA 45121
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
45122 ACATTAATTAGTATTGGCTATCCTATTAAACGCGACGCTTTGTACAAAGCG---TTTACTATAATACATGATTATATTAATAATATTAGA 45208
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
45209 GCATATGATAGTTTACCTTCTGAG 45232
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45076
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.12
45077 AATAATGTATTAAATAAATTATCATGGTTAAAATCACATGTAAAAAA-AAAAATAAAAATATATTATATGCAAAAATCTTAATAGAAAGT 45165
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
45166 TTAATAACTAAGAATTTTAAAAATCTGATATATGAGAA-GGA------TGC---TAC---ATCAAGTGGCCTACAGATAATAGCGATGTT 45242
31 K L N I D I L N V L Y E E G Y I S D F E I K K N A D N K D I 60
45243 ATTGGTTCAGAATCTTCTGATATTTATCAGATA---GCGATA---AAT---TCCTTTATTTATAAAATTGAAATTCAACGTAAATTTTTA 45323
61 I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L L 90
45324 GAATCCTTC---TTT---TTA---AAG---ATTTTAAATAAATCGTTAGTAGAGTTTTTAAATCAAGAG---AAATCTGAAACTTTGGGA 45398
91 N Q I D L G L V T Y I L S T S K G I F S G K E A R R L N L G 120
45399 TATGCT---CTTTTTATATTGTGG 45419
121 G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47827
Protein: lcl|KC353356.1_cdsid_AGH24276.1 [gene=rps8] [protein=ribosomal protein S8] [protein_id=AGH24276.1] [location=26777..27163] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
47828 AGACATCAGATTTTCAGTTTGTAGACGAGAGTCGATTCTCTCAAG---GGGCAA---AATAGGAGAAATAGTTATGGAAGCATTTATGAA 47911
1 M T Q I Q S I H S L I S N I K Q G Q K N N L S N I N V I Y S 30
47912 GT-ATAAGGATTCCAGACCTTGAAGAGGAATCATCTATTCCTAAAAAAATATT-GAGTTTACTAAGAATAAATTATCTTTGGTAAAGGAA 47999
31 K L N I - D I L N V L Y E E G Y I S D F E I K K N A D N K D 59
48000 TATTTATCAGCCTTGAAAGATAATAAAGATGAGACAGCATACAAAAGAATAATTCCACAAAATTGGAATGCAAAAACTCGTCAAGATATG 48089
60 I I S V R L K Y Y N N I S A I R N I Q R V I N K H I S L K L 89
48090 ATAACGTATTTGGACGTTTATATTTCCGAAGAAGAAGCTCTATTTGATAATCCTACTTACATATCTTCTAAGGAAAAGAAAATAAAACTT 48179
90 L N Q I D L G L V - T Y I L S T S K G I F S G K E A R - R L 117
48180 GAACTTAATTTGGGATTACAGATCCTTAATTGG 48212
118 N L G G T I L L I V W 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45893
Protein: lcl|KC353356.1_cdsid_AGH24277.1 [gene=rpl6] [protein=ribosomal protein L6] [protein_id=AGH24277.1] [location=27178..27735] @ 0
DNA length: 1110 Protein length: 185
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.06
45894 CTTATCAAA---AATGCTAGGCAACTCAAGAATCCTGAAAAAAAATATCTA---TTTTCTGTATAT---ATTCTTGTTAGCGGTAAAAGA 45974
1 M S H I G S K L I K I P A N V S V D L S L Q K V S V S G D L 30
45975 GCTAACGTG---TTACCT---TCCGAAGCGAAAATATTAATATCTGATGCCCTGGACGAA---TTAAACGATTCAAAATTGGCTAAGATT 46055
31 G N L S L P F S N I S I N I N S N G D E R F L D L K P I N T 60
46056 GGGGATAAGAAATATACTATACTAAAAAGAGTCCTTAAACGTTTTGAAAGTATACGTACTCGTTTATCGAAAGTTTTAAACGGC---TCC 46142
61 G T K K Q N A - E S - Y R M W G T Y R T L V E N M I L G V S 88
46143 GAA---TTTTCGGATACCATAGCCAATGACACAGGTCATGTTAAGAAATCTATTATGAATTTAATACTTCGCAGCAAAGATCAAAAACCA 46229
89 K G Y S K T L E L I G V G Y K A Q Y N N N T L V L K V G Y S 118
46230 TTTACATCATTTAATATAAATATTCTAACTATAGCAAAACGTATCAAGGATTATGTTATTAATGATAATGATATTCTTATGAATACGGAT 46319
119 I D M L - Y E I S S D V K - V - D C S R S N I I V I T G I D 145
46320 AAAGATAAATTGGCTCAAGCTATTGAAAGTGCTAAACTTATTGATTTATCTAAACCTAAAAAATCTAAAAATAAAATAGATCCTTCTAAA 46409
146 K Q K V N Q V A A E I R L L R K P E P Y K G K G I R Y L G E 175
46410 GCTGTTGTTAATACTACTAGTAAAAAGAAA 46439
176 V I R L K E G K K K 185
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.11
23 TATTCTACAAATGAATATAACAATATTAAA---CTAGATCCTGGAACGCTCACAGATGTT---AAAACAAGAAAAGCTATTGCTTCAATG 106
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
107 ACTGAATGGAATCCCTTCTTAAGAGATAAGGTTCAAAAAGCTATACATAGCTCCTTGTC-CCATATATTACCTGATTCTTCCGAAATATT 195
31 S T N Q K M I Q K N I E K - I D S Q R L P E I I G Y F L S E 59
196 ATGATAACATATCTTTTACTTAATTCCTTTTTATTGATTAAACTTATTTTATTTATTTTAATTAGAATTTTTCTAATTCCAAATATTTTT 285
60 K I K E S G L S N I Y L K K T Y L F - H G K V K T V V E E L 88
286 TCTAAATATATAATTATTATTTTT 309
89 R K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 309
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.12
310 TTTAGTATTATTATATACATATGTTATAAATATCCTCGTACCAATATATTA------ATTAAGGAAGATTTATTCGAATATGCTTTAAAA 393
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
394 ACAACTAAAGAAAAAATGATA------AATATATGTATCATAACGTTATATATATTTACTTTTGTTATAGGTATATTTTATCTTAGATAT 477
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
478 ATAAATATAACAAAAAAAGTAGACTTAAAAATTTATTATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAAGAAGAAATTATTTTA 567
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
568 AATGTGGTAATAATAATA 585
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 732
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.14
733 GCAAATTCTTTTCTTAAAATAAGTATAAAACATAAAATTGAGTTATTGTATAAAAAATATTATTTTGATAAAAAGCCTCATAAACCAAGA 822
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
823 CCTGATAATTTTTTTTCTTTATCTGAAGAGGCAAAAATTTTATTTTTTAAAAATAATCCTACATTACCTGAATTACTTTTTCATAAATAC 912
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
913 AAGAAAATGTCTATTTTCATAGATAATATTTTAACAAAAGGTCATTATTTTATA---TTAATTATTAGTATTCTATATGATGTTATAAAT 999
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
1000 AATGATTTTATTTTGACT 1017
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1044
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.28
1045 TTTTTTTATGAACTTTTTCTAAGAATATCTAAATTTGTAGATGACATTTGGATACCATATGATCAAGCATTACATAATTTGATA---TAT 1131
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
1132 AGTAAAAAATTAAAATATATAAACGAAGAAACATTAATGATAGATGATGAA------CCACATGATATGTCTTTTTAC---CAAGAT--- 1209
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
1210 ATAAACGAACATTATATAAAACGAGGTTTTGTTAAAGATCCAAATAATATATAGAATAAATG-AAAAATATAATAAATAAAATACGATAT 1298
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
1299 ATATATATTATACTATTA 1316
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1517
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.07
1518 ATATGTAAATCTTTATAT---AAAATAATGCCGACAACTAAATATTCGGTAGTTAAAGATATTATTTTGGTGAAATATAGTTTAGATACT 1604
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
1605 TCAGCTGATTATCAACCTTCTCAAGATGAAGCCTCATATTTCCCTTCTGATGATATTAATGATATGATACCAGTACAAATGCAAGATATA 1694
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
1695 CCTGTTAAATCCAAAGAGCCTAAAATAGAATATCCTAGAAGACCTAATATTGATCTTAAACGTGAAACAATTATCCCTAGATTTGAAATT 1784
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
1785 GAAACTGAAACAATACCA 1802
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2006
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.09
2007 ATTACTGAATTTGTTACACAAAAAATAAGGGTTTCAACAGAAGATATATCTGTAACAATTATACGAAATACAGTCCATGAATATTTTATA 2096
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
2097 AAAAGTAAT------TTA---AATAGTAATCTTACACCGTCTGATTTGCAAAACACTAATCATTTAATTAATTTATTACTTAAGGAACTA 2177
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
2178 ATTGTCAATAGTTTTTTTGCCGCT---GAC---AACGAAAGTTTTATAATGAAACAAATTGCAACATCCCTAATAGTTGAAGTTTTAAGT 2261
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
2262 AATTTAGAAAATGTGGAT 2279
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2075
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.07
2076 ACAGTCCATGAATATTTTATAAAA---AGTAATTTAAATAGTAATCTTACACCGTCTGATTTGCAAAACACTAATCATTTAATTAATTTA 2162
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
2163 TTACTT---AAGGAACTAATTGTCAATAGTTTTTTTGCCGCTGACAACGAAAGTTTT------ATAATGAAACAAATTGCAACATCCCTA 2243
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
2244 ATAGTTGAAGTT---TTAAGTAATTTAGAAAATGTGGATTCTAACTGTTATTATGATAAT---CCTGATATCTTAGATGGGATTGTCCAA 2327
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
2328 GATATTGTAACACGTTTT 2345
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2347
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.12
2348 AAAACAATGATCTTATATCAGAAAATTCAACATACTAATTTTTTTACAAATAAAATTTCTTATAGTAATTTTATCCGTTTTTATCCTGGC 2437
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
2438 AATTTAGGG---AAAACACAACCAAAATCTATTAAAGAAATGCCTGAGAGTAAAACACCTCAAGAAATTACAAAATATTTTCCATCAGGT 2524
31 S T N Q K M I Q K N I E K I D S Q R L P - E I I G Y F L S E 59
2525 ACAACATTACAAGAT---CTTGAAGAAGTTGCA---CAAGATGTA---ATGTATCCCAAAGAAATGTCTAGTATTCCTACTGAAAAAAGT 2605
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
2606 GAAGAACCAATTAAATCTGCA 2626
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2710
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 48 Length-adjusted: 0.50
2711 ATTTTTAATCCATTAAGATTA---GTTTATAACACCAGTAGTAAAGTATGGAATTACCTAAAAAAAAATGTTGAATTTAAATTCCATAAA 2797
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
2798 CCTGAGTCTGATAATTATACAGTGCCTATTACAGCCGTTTATGATACAAAACAAGGATCATCCGATATTCAATATAATTTA---GAAAAA 2884
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
2885 ATAATTAAAGAT---TTGAAA---ATAGCTATACAGGAAAAATCTTTGAATAAAGAACAAGTAAAAAGCATTATTGATGATATTCGTAAA 2968
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
2969 AATTATGTTACTAAAGGG 2986
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3154
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 26 Length-adjusted: 0.27
3155 TTAGAAGAAAAAATGTCAATAGCTCTTAAAAATATAAATAATTTTCTTGAAAAAAATAAAGATTATACT---AAAGAATTTCTTGAAGCA 3241
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
3242 AAAGAATTACAAGAATGGTATGATTATTTTCAGAATAGAGGAGCATTAAAAAAATTATCAAAACAAGAAAAAGAA---GTTTATGATAAA 3328
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
3329 TTATTAGAA------ATAAAAAATAAATATTTACCTAGCGAAAAAGATTTTCAAGAAAAAAATAGTAGTTATTTGACACCTCTGAAAAAA 3412
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
3413 AATAGTGCTTTACCTATT 3430
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3214
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.19
3215 GATTATACTAAAGAATTTCTTGAAGCAAAAGAATTA---CAAGAATGGTATGATTATTTTCAGAATAGAGGAGCA---TTAAAAAAATTA 3298
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
3299 TCAAAACAAGAAAAAGAAGTTTATGATAAATTATTAGAAATAAAAAATAAATATTTACCTAGCGAAAAAGAT---TTT---CAAGAAAAA 3382
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
3383 ---AATAGTAGTTATTTGACACCTCTGAAAAAAAATAGTGCTTTACCTATTAATTTACAAAATGAAAAATCAGCTAAATGTTACTTGCCA 3469
61 I K E S G L S N I Y L K K T Y L F H - G K V K T V V E E L R 89
3470 AAAGATTATGTTATGGAAATA 3490
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3521
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.07
3522 ATAAATCACAAACATTATCTATTAATGATCTTAAATTGTTATCCATTAATTCTTCGGCAGTTACT-ATAGATACAGAAGGTGTT---ATT 3607
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
3608 AAAATATCACAAGAGGCGTATCAGTCTTTTACTAAATATAAAGATAGCTTAGGATTTAAATATTTATTAGAATATCCAAAAACAGAAGAA 3697
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
3698 ATATTATTACGTATAAAAGAAAGGAATTTTTTTATTGCTAAAAATATGGATTCTAATCCTAATGGAATTATTGCTTTAGCTCACCTATCA 3787
61 I - K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
3788 CATAATACATTAATTATTCCA 3808
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3997
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.18
3998 CTTGAAATGACGTTGTATTTTTATGGCAAAAATACAGATAATAAAAGTATTGTAGAAGAAATCATATTTACGCAATATGATTTAACAAAA 4087
1 M S N K L Y L R I K K T - N Q H L Y A Y V L H N G K Q L L T 29
4088 AATATATGGTCCGAAAATTATTACCAATATCCTTTTAAT---GTGGATCAAGAATTTTTACGTCAACTTTCTATTATTTTTTATAGTAAT 4174
30 V S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E 59
4175 AAATTACAAGAACTTCAACAGGATTATAAAGAACTACAAGATAAA---TTATATTCACTTCTTATTAAAAGTCAC---GAAGACTATAAT 4258
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
4259 AAGGAA---ATAGATCGCCTT 4276
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4207
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.28
4208 CTACAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAAGACTATAATAAGGAAATAGATCGCCTTAATGAATTAAAAACAAATTAT 4297
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
4298 TTGAAAGATAGAAAATATAAACAATATTTTAATTCATTAACAGATGAAGAACAAAAATTAGTTTCTCATATAAAAATTTTT---CAAGAT 4384
31 S T N Q K M I Q K - N I E K I D S Q R L P E I I G Y F L S E 59
4385 AAGATTAAAGATGATAATATACAAAATGAAAAAAAACAAAAGAAAGAACTTATTAATCAACTTTTGGAAAAAAATAAAAAAGGAAAAGAT 4474
60 K I K E S G L S N I Y L K K T Y L F H G K V - K T V V E E L 88
4475 AAAGAAGAAGGAACAGAAATTTTA 4498
89 R K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4342
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 30 Length-adjusted: 0.31
4343 GAAGAACAAAAATTAGTTTCTCATATAAAAATTTTTCAAGATAAGATTAAAGATGATAATATACAAAATGAAAAAAAACAAAAGAAAGAA 4432
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
4433 CTTATTAATCAA---CTTTTGGAAAAAAATAAAAAAGGAAAAGATAAAGAAGAAGGAACAGAAATTTTAACTGCAAAACAAAAAAAGGAG 4519
31 S T N Q K M I Q K N I E K I D S Q R L P E I I - G Y F L S E 59
4520 AAATATCTAAAGGATAAACAAAATATAAATAATATCGATGAAAAGAATAATTGATTATTTTTTAATAATATATTATTATTTATTATTATT 4609
60 K - I K E - S G L S N I Y L K K T Y L F H G K V K T V V E E 87
4610 TATAGGTCTAATAATGACATCTTGGAT 4636
88 L R K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4687
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.10
4688 TTTATTAACAGAATATCGCTT---TTGGAT---TTTAATTTATATTTGTT-GCATATATATATAT-AGTATTAAAAATATTCTGAAGGCT 4769
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
4770 TCAGGAGATAACTATCTTAATTTAAAAGATATTATAGAGATATTGTATGCACCTTTGAAAACTATAGATCATGCTATTAAATATAATAAA 4859
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
4860 TATATTAAACCTTATTATTACAAA---TTTGTGAGTAAATTTTATAACTTTACT---GAAACAAAAAATATAAATGATGAC---CAGATA 4940
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
4941 CAAGTATTTGTCTTTTTT 4958
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5163
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.23
5164 TTGGATATAAATTTGATGATTCTCGTAAAAAAAATACAAAAGCT-ATTTATCATGATGAAGAAAAAACAATACGGGAATATATAGAAATT 5252
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
5253 AAATTTAATAAT---ATTATAGATTATTTACTTGATGAAGTTGATTATGAGTAT------GAATCAACTCCTTATTGTAAAAGTGAAGTC 5333
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
5334 TATAATGAATATTGTTTA---AATAAATATAAAAATAAAAAAGCTCTTTATACAAGTGAAGATTTAGATATTTTGAGAGCCTTATATTGT 5420
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
5421 GAGCTTATGCCAAATATT 5438
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5231
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
5232 ATACGGGAATATATAGAAATTAAATTTAATAATATTATAGATTATTTACTTGATGAAGTTGATTATGAGTATGAATCAACT---CCTTAT 5318
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
5319 TGTAAAAGTGAAGTCTATAATGAATATTGTTTAAATAAATATAAAAATAAAAAAGCTCTTTATACAAGTGAAGATTTAGATATTTTGAGA 5408
31 S T N Q K M I Q K N I E K I D S Q R - L P E I I G Y F L S E 59
5409 GCCTTATATTGTGAGCTTATGCCAAATATTATTCATTTAAAAATGTTTTTATCTAGGATAGAAGTTGTATCGGAAGTATCCTTAATGAAA 5498
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
5499 ACGTCAAAAATAGTAATATTT 5519
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5606
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 32 Length-adjusted: 0.33
5607 TTAAATTTTATGTTATATTTG---GTGAAAGAAGAAAATCCATTTATGGATTTCGATAGCGGTTCACATAAT---AAAAATCTATTAACA 5690
1 M S N K L Y L R I K K T N Q H L - Y A Y V L H N G K Q L L T 29
5691 ATAGAAAATATTAAAAAGATATTATGCAAGATTATAAAAAATATTAT-ACAAAAATGGTCAAAAGAATAATAAAAATAATAATG---CAA 5776
30 V S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E 59
5777 ATGATAATAATAATT---TTAATAAATATATGTAAAATTATTACTTTCAAAGTAAAAGCAGATGAAAAAAATCAT---CAGGAAGTCTTT 5860
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
5861 GAAAATTTTAGAAAAATACTT 5881
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5800
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 44 Length-adjusted: 0.46
5801 ATATGTAAAATTATTACTTTCAAAGTAAAAGCAGATGAAAAAAAT---CATCAGGAAGTCTTTGAAAATTTTAGAAAAATACTTAAAGAA 5887
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
5888 GGTTTGTTTAAT---ATATTAGAAAAGTTGGATTGTCTTGAAGATTCACAAACAATGAAGGAAATAGTAGAAACATTTATGGATAATTTA 5974
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
5975 ATGCTGGAAGAATTATATATTAAATACCTTGCAAAAGATGAAAAAGATTATGAAGGTTTTATGAAAGAAATT---CAATCATTATTAAAG 6061
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
6062 GATTATCTTCTAAGACTT 6079
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6558
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.23
6559 ATTTCGAATCCACAATGTCGTAAATTGCGTCAACAATGTAAACAGCATCATAATAAATATATTACTGATACAAAAATACAAACTAGACAT 6648
1 M S N K L Y L R I K - K T N Q H L Y A Y V L H N G K Q L L T 29
6649 AGAGGTTTAAGCAATAGAGAATTACAAGGTATTCGATCTCCATTGAGTAGTAAAAAGTTTAAGGAGGTAAATAATATTGATATGAAAAAT 6738
30 V S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E 59
6739 CCTTTTCAAAACTCACAAAAAGTGTCAGAACCTTTTTCACCTCTTACAAGTATAACTAAAACCTGTAAAACAACATTTAAATCCTTTATT 6828
60 K I K E S - G L S N I Y L K K T Y L F H G K V K T V V E E L 88
6829 AAAAAAGATTCATTATCAATTGCC 6852
89 R K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6891
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.20
6892 ATAAGTCACGAA---AATCAAAATATAAATCTTAGTGATCCTACATTTCCAATACCTCCATTGCATTTTGGTATTACTAATGATACCCAA 6978
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
6979 CATACCCCGTCTACTACTGTTTTAAATGATTTCTCTAAAATAGATAATACTTCTTCAAGCGTAAAACCAATTCCTGAATTAAAAAATCCA 7068
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
7069 GACGGTGTTATATATACTACTAATATT---ACTGAAAAAACAAGTATGGAAGAATTAACCAAGCAGCAACTTATTGATGAATTAAAAAAA 7155
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
7156 CGTAACTTGATAAAAATA 7173
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6936
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.12
6937 CCAATACCTCCATTGCATTTTGGTATTACTAATGATACCCAACATACCCCGTCTACTACTGTTTTAAATGATTTCTCTAAAATAGATAAT 7026
1 M S N K L Y L R I K K T N Q H L - Y A Y V L H N G K Q L L T 29
7027 ACTTCTTCAAGCGTAAAACCAATTCCTGAATTAAAAAATCCAGACGGTGTTATATATACTACTAATATTACTGAAAAAACAAGTATGGAA 7116
30 V S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E 59
7117 GAATTAACCAAGCAGCAACTTATTGATGAATTAAAAAAACGTAACTTGATAAAAATAACAAAATCTCCTGCAGTTATTATTGAAACAGAA 7206
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
7207 AGTGATGGTCATATACGTATT 7227
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7257
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.16
7258 AAACACGGGCGAGCGTATTTAGAATTACAGCCAAAAAGTCAA---ATTTTTATAAATCCTTTAGAAATCACCAAAGAAAATATTACTCTT 7344
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
7345 GATGATTTAAATAATTTTTGTATTATTGTACCAAAAAATTATGAGGATGATCTTATAAAAGCCTCGCCACATATGATAGCAGCTTATGAT 7434
31 - S T N Q - K M I - Q K N I E K I D S Q R L P E I I G Y F L 57
7435 CCTACTAATACTCATTTGTACGCATTTTCTACATTTACAAGCGAAAAAGTTGGTCTAAAAGTAAGTGATGAGCAATTTAAAAAATTTCAA 7524
58 S E K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E 87
7525 ATGAAAAAACAAGGTATAGTA---TTT 7548
88 L R K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7617
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.18
7618 GTATTAGATAAAAATGAGGCTTATGTAGCCAAGTTTGATCAAGACTATTTTTTTACAATGAGTCTTAATGTAAAAAAGGATTTA---GTA 7704
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
7705 GATAATTATAATAACTTAAAAACTAAACATTATGAGAAATATATGCCACAAACAATATCAAATGAACAATTATTAAATATGTGCAAAGAT 7794
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
7795 GTTGACAAAGAAGCTCAAAAAAAAAAACCT---AAACACCCTATGACTCTTGAACAACAGCAAAAAAAAGAAGTTGAAAAA---CAGAAA 7878
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
7879 AATCAATTATTTCAACTA 7896
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8228
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.18
8229 ACCTATATAAAAATATTTACCTATATAGCAAATAAAATTAATTAT---TATAATGTCATTTTATGGGAA---AAAATCTTACTTATTATA 8312
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
8313 AATACTGTACCGCATATCATTTTACTTTCTGCTCTATTCATAGATACTTTTTATTTAGGTAAATTATTT---TATTTTTAT---AAAGTC 8396
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
8397 ATTTGGGTTACATTATTCTTTTTCTTAATCCCATTTAGTTTATATTCTTTTGACTATGTTTGTGAACACTATATAAATTATTGGGAAAAA 8486
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
8487 AATTCTGAAAATGTATGG 8504
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8732
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.04
8733 GTTACCTGGAAATCTTGTGGAGATATAAAAAACACCATTATCGAAAAGGATCTTAATTTAATAATTAGATTAAAAAGTATTATAACAACA 8822
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
8823 CATGAGATAATTACTAAATGGACAAATGTACAACAAAATATAAAAAATATTAGAATTATAATATATATAGGATATTTAATATGCTGGGCT 8912
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S - E 59
8913 TATATATTATACGTAAGTTTATCAAAT---TTT---AAAGATTTTTATATGTTATCATGTATAATTGAAGTGATAAAAACTCATCTTCTA 8996
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
8997 CAA---GGTAAAGTCCCACTA 9014
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9162
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.07
9163 CTACTTTATACAATATACATTCCA---AAAATATCAGGAGTTACTCTACCCGAATATCCTTTAAAAGATGTTCAAAAAGCTAATTTTATC 9249
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
9250 CAGTTCTTTAATAGTATAGTTAAAAATGACCCAATATGGGATAATTTATGTCAAACATATAATAAAGTAAATTCTTCATTTTTTTATCAA 9339
31 S T N Q K M I Q K N - I E K I D S Q R L P E I I G Y F L S E 59
9340 AAAATTAAAGATGCTTATATT---AACTTAACTTTACAAACAGCTCAT---TATAAAGAACAAATAGCTATTTATTTATCATTTATCTTA 9423
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
9424 AAATTG---ATTGAAATGCAC 9441
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9318
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.05
9319 AATTCTTCATTTTTTTATCAAAAAATTAAAGATGCTTATATTAACTTAACTTTACAAACAGCTCATTATAAAGAACAAATAGCTATTTAT 9408
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L - L T 29
9409 TTATCATTTATCTTAAAATTGATTGAAATGCACCCTCAAATACCTATTAAAGATATGTGCTTAAAAGCAGTCAATTATGATGTTTATTTT 9498
30 V S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E 59
9499 GACATAAATGAGCAGGATAGTTTTTATGTTACAATAAAACAGAATCCTTATAGTCCTATTGAAATTAGTCTTCAACATGATAATATTTGT 9588
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
9589 TTGCACACTTTCCATTTATTA 9609
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9751
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.05
9752 TTATTTTTCATATTACAGATATTAATAAAATTTAAATATTATTTCATGATATTTATTGTTTTAACACTAAGTTTATGTTTTGCAATTATT 9841
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
9842 ATACATTATAATTATAATAAAAATAAAAAACTACTAATTAATAAAAAACAAGAGCTTTCTAAACTATTAGATTATTTATATATCAAAGAT 9931
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
9932 ATAAAAATGGAAATATTA---GATTTATTTTTATTAAACTTATTTACAATA---GGATTGATTTTTTCCTTAAGAAATCTTAATATTGGA 10015
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
10016 GCAACCATAAATATTTTC 10033
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9817
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
9818 CTAAGTTTATGTTTTGCAATT---ATTATACATTATAATTATAATAAAAATAAAAAACTACTAATTAATAAAAAACAAGAGCTTTCTAAA 9904
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
9905 CTATTAGATTATTTATATATC---AAAGATATA---AAAATGGAAATATTAGATTTATTTTTATTAAACTTATTTACAATAGGATTGATT 9988
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
9989 TTTTCCTTAAGAAATCTTAATATTGGAGCAACCATAAATATTTTCTTATTTCGACCAAGTCTT---GTAATATTATCGCAAATTATTTCA 10075
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
10076 CTTTGTGTATTAATGTAT 10093
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10231
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.17
10232 TTACATGATTTTATTTATATTAAACTAAAACCAATTAATAAAATAAACTCTTCTTATTTACAAGTGCTAATGATAATACTATGCAATAAG 10321
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
10322 ATCTTGTACATATATGCTTATATAAAAAATATCTTCTATATTTTACGAGCATTTTTTCCTGAAATTTTA---TTATTTATAAGTTTG--- 10405
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
10406 ATA------TCTGATTTAAATAATAGAGAAATAAAA---ACATTTTATTATATCTTAGCTATATACCCATTAATGACATCTTATAGGACC 10486
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
10487 ATTAAAGAAATTCTAGGA 10504
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10405
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.25
10406 ATATCTGATTTAAATAATAGAGAAATAAAAACATTTTATTATATCTTAGCTATATACCCATTAATGACATCTTATAGGACCATTAAAGAA 10495
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G - K Q L L T 29
10496 ATTCTAGGAGACTATGATATGTTAAATATAAAT---GATAAATTAACTACATATTTTTATGAAGATAAAATACACGATAAATTGAGAAAA 10582
30 V S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E 59
10583 ACAATAAGTGAATATGAACGTACTAGAATATTAATACAAAGTATGACTCTTTATTATAAATATGATAAACAGATAAGAGAATATATATTA 10672
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
10673 AGAGATTTCAAAAGAATATAT 10693
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10894
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
10895 TTGGTAATATATATATTTATAATAATATATTTGTCAAGGAATACATTATAT---TTTATAACCGATAAT---ATACATATATTCAATTTT 10978
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
10979 GAACTTATTCAAGAATTTAGCCAAAAA------GAAAAATACGACTTT---TTCATAAAATATTTAAATTATACCCTGTATATGGAACGA 11059
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
11060 GAATTTCATTCTATACGTACATCAACCTTTTTAAATACAATAATGTCTGATAAAAACTATTATGAAAATTTATTATTATCCCTAGATATT 11149
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
11150 AATACAATTAAAGTATTG 11167
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11101
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.09
11102 ATGTCTGATAAAAACTATTATGAAAATTTATTATTATCCCTAGATATTAATACAATTAAAGTATTG---GCAAAAGAATTACTTACAATT 11188
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
11189 GCTATTATAGTAGAA------GATCGTTTTATAGAA---TTAGATGAAAAGCTAATGATTGAAACTATATCAGAATTGATA---GAAGAA 11266
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
11267 CTCAGACAAGAGGAATTACAAAGAATTATAGATAAAAATCCAATTACTAAAATATATAACAAAATAGGAGAATTCTTAAATAGTCAAAAA 11356
61 I K E S G L S N I Y L K K T Y L - F H G K V K T V V E E L R 89
11357 TTTGAATGGATATGATGGGTTTTT 11380
90 K N G I - I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11742
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
11743 TTAAGTATTATTTTTTATTTACGTTATTTATATTTAGGTCAAAATTTTATGTTATATAAGTCAGAAAATAGTATTATATATCTCTCT--- 11829
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
11830 TCATTTAGTCGATTGTTATTTATGAGCATTTTAATTATAATTGTTATTTATAATTTTTATAAACTTTTGGATATTATTTTTTTTGATGAA 11919
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
11920 ATTTTAAAACTATATCTC------TATTTTTTTAGGCATAAATTTAATGACAAAATGCGACTTTTTGTAATAGCATATTCTATAAGAAAT 12003
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
12004 ATTTGGGGACCTATTTAT 12021
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12387
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.12
12388 ATGTTTGATGGCTTG---CTTAATAAAAATTTTTATAATGTACAA---TAT---TTTATATTTGCTAATAACAAAAGTACTTTAAACATG 12468
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
12469 AAAACCAATATAGATTATTTATATTTT---ATGGAAAAATTAAAAGAAGAAACTACTATTAAATATATTTTAAATGATTTT---GAACAA 12552
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
12553 GTACCAGAAGAG---TTAGTCAATAAACAAATAAATCAAATGTACTTACGTTTTAGTATAATACTAATATTACTTTTTATGACAATTTTT 12639
61 I K E S G L S N I Y L K K T Y L - F H G K V K T V V E E L R 89
12640 CTTTATGATGTTATTAGATAT 12660
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12576
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 28 Length-adjusted: 0.29
12577 CAAATAAATCAAATGTACTTACGTTTTAGTATAATACTAATATTACTTTTTATGACAATTTTTCTTTAT------GATGTTATTAGATAT 12660
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
12661 TCTATAATAATAAAAATACTTAATTACAATATATATTCTTTT---TTTATTCTATTGCCATTAATTTTTATATTATATTCAGCAACTAAA 12747
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
12748 ATTTTTACTTTGTCTAATACAGCTGAAATTGATGATTTTACAGAATATGTCTTTAATAAAAAATTCAATATTATTTC-TTGGATTTTAAT 12836
61 I - K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
12837 ATCAATTCATTATTTATATTT 12857
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13161
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.28
13162 TTTTATAACAAAATAATAACAGAAGTTGTACAAGAATTTTCTTTATTGCATCAGTTATATTATTTTATGCGAAATAGTATTGTAATATTA 13251
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
13252 AGTGTTATCCAAACTGTAGTATCTTTT---GTACAAAAGATTAATTTTATCCTTAAAATTAATCAAGTAGAAGGTATTTATCTTACTGTA 13338
31 S T N Q K M I Q K N I E K I D - S Q R L P E I I G Y F L S E 59
13339 AAAATTATTTATGAAAAAGGTTTGCTTAAT---AAGATGACTGAAACACAATTAAAAAC----ATTATTAGATATCATTTGGAAAAAAAT 13421
60 K - I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L 88
13422 AACAAGGAA---ATGATCTTATAT 13442
89 R K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13542
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.07
13543 ATGTCT---AAATTCCAAATAATAGCATACGATATAGTAACTAAAATTTATAAA---GCTCTTAAGAACACATCAATTACTACCACCGAT 13626
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
13627 CCTATTGTGAACACTTTTATTTATAAGAAC---GAACGTATTAATTTAGATAAAGAAGCATGCGAAAAGGCTTTTAAAATAATAACAACG 13713
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
13714 ATATTACAAGAAGATGAAAAAAATTTA---ATTAAGAAAAAACAAACCACAACA---AAATGGGAAAAAGTAATAAGAAAAGTAATATAC 13797
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
13798 GATGCAATTATGGAAGCA 13815
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13542
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.07
13543 ATGTCT---AAATTCCAAATAATAGCATACGATATAGTAACTAAAATTTATAAA---GCTCTTAAGAACACATCAATTACTACCACCGAT 13626
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
13627 CCTATTGTGAACACTTTTATTTATAAGAAC---GAACGTATTAATTTAGATAAAGAAGCATGCGAAAAGGCTTTTAAAATAATAACAACG 13713
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
13714 ATATTACAAGAAGATGAAAAAAATTTA---ATTAAGAAAAAACAAACCACAACA---AAATGGGAAAAAGTAATAAGAAAAGTAATATAC 13797
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
13798 GATGCAATTATGGAAGCA 13815
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14638
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 30 Length-adjusted: 0.31
14639 ATATCAGATTTTATTTATGTAACATATCATTTTGACATAAATAATCTTTTATCTAATTGTAATATAAATCATGTAAAAGATTTTCTAGTA 14728
1 M S N K L Y L R I K - K T N Q H L Y A Y V L H N G K Q L L T 29
14729 TTTATAGGTAATCATAACAAATTATTTGATAATCACTTATGCAAAAAACTAATTCTTACAAAAAAACAATATTTATCTAAATAT---TCA 14815
30 - V S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S 58
14816 ---AAACTAATGGAAAAGGGTTTAGAAAATAAACTCCATAAAAAAACTAGTAGTATTCATACTCTTGATCAATACATTCAACATGATTTG 14902
59 E K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L 88
14903 AATAAAAATGAACAGAGTACTAAA 14926
89 R K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14786
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.16
14787 CAAAAAAACAATATTTATCTAAATATTCA-AAACTAATGGAAAAGGGTTTAGAAAATAAACTCCAT------AAAAAAACTAGTAGTATT 14869
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
14870 CATACTCTTGATCAATACATTCAACATGATTTGAATAAA---AATGAACAGAGTACTAAAGACTTA---GCTATTTTAGCTAAAGAGATA 14953
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
14954 AATGCTGCTAAACTACTTTTAAATTGCTATTATAAAGTAGTTGCTCAAAAATTTTATAATGCTCATTTTATAAAAGATGCCATAATTTAT 15043
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
15044 CAACATTTTGAATATTTT 15061
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15169
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.11
15170 AATAAAATTACTATGGATTTCGAAATATATGATAAAATGAAAGCACTTTTTGCAAATTATCTTTCAGCAGATTCTACATTACAAAATATG 15259
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
15260 AGCTTTGAT------TTATTTGAAAAACAAACTAAAGATTTACAGGATGAACATTTAGCAAGCTTTTTCAATAAAAGT---ACACCATTA 15340
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
15341 ATACAACATAGC---TTAAGTTTTGATTATTTATCTAAAATGATACACATAATTAAAAATTATGCTAAAAAACCTGGGGAGATATTAAAT 15427
61 I K E S G L S N I Y L K K - T Y L F H G K V K T V V E E L R 89
15428 ATTCTTAGTATTTTATATTAT 15448
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15688
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.11
15689 AACCGTAATGATTTATATGCATTGAATTTAGCAGAAATTTCTAATTTACTTTGTAAAAAAATATTTAATTCT---GAAATT---ACTATT 15772
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
15773 TCATGTTTAAAGTCATATTTAAAAAAAATGGCTTTTAAATATGAAGTGACTCCTTGTGCAATTTCCGATACTTATTCTTTTCCTGATTCT 15862
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
15863 TTTATGCAAGAATGTAAATGTATAATATCAGATAAAGTTTTAATGAAGATATCAAAGAAAAAGAAAACTATTGTATTT---TTAAAAAAA 15949
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
15950 CTA---TTAATAGTTTTT 15964
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16018
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.25
16019 ATCATGGATCGGATTATAATTAAA---CAAAGTACAATGGCAGATCTTTACGGAATGACAATAGGAGGTAGTCGTAAATCTATTTCAAAT 16105
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
16106 GCGCTCATTGAAAAAATAATTGAAAAAGGAAAATTTGATATAAACCTTTCTTATATT---CACATATTTTCTGATATATTATCTAAATAT 16192
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
16193 TATAAATATTTTTATAAAACTAAT---TATTTACCTTATTGTGATACTTATTTA---ACATTACGAGAATTTCTAAAGAAAATG---GAA 16273
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
16274 GGTCCTTTAACAATGTCA 16291
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16201
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.09
16202 TTTTATAAAACTAATTATTTACCTTATTGTGATACTTATTTAACATTACGAGAATTT---CTAAAGAAAATGGAAGGTCCTTTAACAATG 16288
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
16289 TCAACAGAATTTTTAACATGGTCATATAATCCAAGAAAAATGAAAATATTACGTATAAATGTTGTAAAATATTCAAAAATAACAAATGAC 16378
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
16379 CTTAAA---TCT---TTGAAACGACGTATGATTAACGTAGCATAT---TTTACAGGAAAAATTGATCAAACTAAAATATATAACTCAGTT 16459
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
16460 TCTGCTTTTATTATACAT 16477
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 21823
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
21824 CTTTTAAAT---ATGTACTTGCATGGAGTAGGAACAGTTAAACCAAGAAACCTAATTCTGCAAACGCAAAATTACAAAAGTTTGTTAACT 21910
1 M S N K L Y L R - I K K T N Q H L Y A Y V L H N G K Q L L T 29
21911 AATGGTGTTATTTAATTGCTTATATACCAGGATTTG---GT-ATAGATTA-CAAAAAAACAATGAAGTAATGATAGGGGAGGTCGTGTAC 21995
30 V S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E 59
21996 CTGATTACCAGGTGTTCGATATCATGTATGCGTTTAAAAAAAGATTTTATGTGGTTAGA-AAAATTGATAGATAT---CAACGTGTAGT- 22080
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
22081 AAATATGGTGTGGAAATCCTA 22101
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22027
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.05
22028 TTTAAAAAAAGATTTTATGTG---GTTAGAAAAATTGATAGA------TATCAACGTGTAGTAAATAT-GGTGTGGAAATCCTAATCGTG 22107
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
22108 TCTTGATATTTTAAATCGTGAGAAAAAAATAAAGCAATCGCCGTGAAAAGTCAAGACATTACACAAAATGATAAAAAATTAATGAAAGAA 22197
31 S T N Q K M I Q K N I E - K I D S Q R L P E I I G Y F L S E 59
22198 TCTTTACAA---AGCTTTCTGAAA---ATTTTCTCAAAATTACGAATTAATTTTATGACTGATTAAATCAATATTTTATTTCAT---AGA 22278
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
22279 AAACAAGAAATTTTTAACTTC 22299
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22656
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.14
22657 ATAGCT---AAAGATTTCCTACGAGTTATATTGATATGCTATAGATCAAGACCTTTTAGTAGATTTATAAGAAAAAACGGTTTAATGTTT 22743
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
22744 CAAGTCAAAAAGAACTATTATGCCTCACGCTTTGAGAAAATACGTGAATCTGTACGTGTACCTTAAGATCTCGTAAAT---ATATAACAT 22830
31 S T N Q K M I Q K N I E K I - D S Q R L P - E I I G Y F L S 58
22831 AGGTATAACACGCAGAGTAAATAAGATAATATCCGAACTACTAATACTTTTTCAAAAAAAAAAAGATATAAAAAATCTTTTAAAAAAGTA 22920
59 E K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L 88
22921 AGAAAAAATAATAATATAAAAAGT 22944
89 R K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 23348
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.05
23349 AATCATAACAAACTTTGGTG----ATTCATTATCTTACAAGGAATACCTTCAGGAGGTTAATTCATAAATTCAAGGTAAATTTACTAGAG 23434
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K - Q L L T 29
23435 CTGCGGTTGTTCCACAATTTAATTAGAAAAGATTTTGATAAGCTTTA-AC-AAAACTAAATCTGGAGAACTTGTTTCTTTCATACTTAGT 23522
30 V S T N Q K M I Q K N I E K - I D S Q R L P E I I G Y F L S 58
23523 GATAGCATCTTTAGGTTGTATGGTAATGAAAATCATTTCTTACGTAA----TATAAATATGCCGGCACTATACGTCGCTAGGTAAAAGAC 23608
59 E K I - K E S G L S N I Y L K K T Y L F H G K V K T V V E E 87
23609 CTA---GAACAC---GTCCTTCTTCTA 23629
88 L R K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24452
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 31 Length-adjusted: 0.32
24453 CTTTCCTATCAGATTTATCAATTTATCAAATTTCAATTATATCATTGGTACAATTTTATCATACACAT-TATAATTATAAAATTATAATA 24541
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
24542 AGTTATGGTTTTCTTTTAGTGCACAATAGTTTTCATATTTTCAAATCGCACCGTTTAGGTTTTATTGTTATCTTCTATTATAAATTATAT 24631
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
24632 TTCTTTTTGTGCACTAGACTTGGTAGTTTATTAGTTTATTTTATTATTATTATCTTTTGGAATATTGTTTTTACTATCCCTATTGTTTGT 24721
61 - I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
24722 GCAGACGATAATTTTGTATAT 24742
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24950
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.18
24951 ATTTCGGATATGCTAATGAATTGGTTGATACTACTTCATCTTCATCTGAATCTTCTGCTTCTACT-TCATCAGCTTCTTCTTTTGCTTCA 25039
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
25040 TCATCTGAATCTTCTTCTAGTACTGACTCTGAAGAAGAGTTGGATCTAAAAGATCAGGTGAATCTCTCTTTGCAATTCTTTTTTGAGGAT 25129
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
25130 TTTAAAAACACT---GTAGCAACAATTTATCTTGGCCATCCTCAGTATTATGAGCAATGTCTCAATTTTGTGGCTACAAAATTACCTGAA 25216
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
25217 ACT---GTATGGGCAAAA 25231
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 25066
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.10
25067 TCTGAAGAAGAGTTGGATCTAAAA---GATCAGGTGAATCTCTCTTTGCAATTCTTTTTTGAGGATTTTAAAAACACTGTAGCAACAATT 25153
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
25154 TATCTTGGCCATCCTCAGTATTATGAGCAATGTCTCAATTTTGTGGCTACAAAATTACCTGAAACTGTA---TGGGCAAAATCTGAGCAG 25240
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
25241 GAACTTTCTTCTTCTACTTCTGAAATTAGTCTTTTACTGGATGCTATTAATTATCAAGTAGAACGAACTCATCCTGAAGATCTCCATACA 25330
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
25331 GTACTTGCACTTAAATCC 25348
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34983
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 32 Length-adjusted: 0.33
34984 ATTAATGCAATCTTATTTTATTCATTACTTAAGACTAAGCTTAATTTATATCAATTACAGGTAAAAAACCTCATCTTGATTATAAGGAGA 35073
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
35074 ACGCTTAACGGTAAAGTACTTTCTGTTTTATTTGATAAA---AGAACAACATCCTTT---GAAGTCAGATTTTATAAAGAATCAAAAAAG 35157
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
35158 CTT---GA-TCAAATATTAGTGAAGTTAGGTTAGAG---ATATAT---TTCAATATAACTTATAGGCTTGTGTATGCTCATAAAAAAGAT 35237
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
35238 CATTTGTTATTAATACTC 35255
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45854
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.08
45855 TTTAATATGAAAGTGGATGGGCGTTTAATAATCAATGAACTTATCAAAAATGCTAGGCAACTCAAGAATCCTGAAAAAAAATATCTATTT 45944
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
45945 TCTGTATATATTCTTGTTAGCGGTAAAAGAGCTAACGTGTTACCTTCCGAAGCG---AAAATATTAATATCTGATGCCCTGGACGAA--- 46028
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
46029 TTAAACGATTCAAAATTGGCTAAGATTGGGGATAAGAAA---TATACTATACTAAAAAGAGTCCTTAAACGTTTTGAAAGTATACGTACT 46115
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
46116 CGTTTATCGAAAGTTTTA 46133
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46781
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.20
46782 TTTCAAGCAGCAACTTATGTTGAAGGGAAATTTTCAGTGTTAGAGGGTATTGAATATATA---CATAATAATCAACCACGATTAAATAGG 46868
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
46869 GTTGAGGACACCCATAGTTTACAAGGTGAAAATACTTCTTATCAT---CTTTTTATAGAAGAATACAAGTCTTTTATTCTTGGCTTAAAT 46955
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
46956 CCAGAAAAACAAGGTATTGCTATTAATTATTTACAAACCATTATAACTTATCAACACAGTATGCTTTTAGATACAACACCATCTCCGCAT 47045
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
47046 GATATTGAAGTCATATTT 47063
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 52879
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
52880 ATTTCAGTCGAATTGTTCTTTGAAACTCAAGAGCATGAAGCGGAATCTCTTGTAATGTGGATCATTACGCACGGTGAATTAGTACAAAAG 52969
1 M S N K L Y L R I K K - T N Q H L Y A Y V L H N G K Q L L T 29
52970 TCACGTACAGACCGCCCGTATGCTATGGAAACTATTTGAAGT---AGAAGTTACAAGGTTTCAATTGTTTCGATAGACCACCTTATTGAA 53056
30 V S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E 59
53057 AGTTTTCATAAGGCTTGACATTCTGTTGGCTTTGTACACGATCTTTATTTAGGGAC-TGGAGTAAAGTCGACAGGGTAGTGGTAGAAGAA 53145
60 K I K E S G L S N I Y L K K T Y L F H - G K V K T V V E E L 88
53146 TCTGCTGCTGGACCATTATTAAAA 53169
89 R K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 57532
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.11
57533 AAGCATAATCCACTCTATTTTAGCTGTAGCTAAAGGCATACT---TTATATGCTTT-AACATATATGCTGCACGTTCTTTACGGTTAAAC 57618
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
57619 GACCTGAAATATAAATCTGAAACCTCAATGGCACTACGCGTTTATAGTAACGAATTA------TTGTTTTATTATACTATTAAAATTAAA 57702
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
57703 ATATTACCAAGTTTAATACTATATAATTTACTAGAAATTGTGCACTATAA-TTTCGTTATTCAATCCGAGAAACGAACAATCAGTTACGA 57791
61 I K E S - G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
57792 TCATTAGGGATAAAAGTATTT 57812
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 60723
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.09
60724 ATCGGCGGAAAAAAGTATGAACC-ATAATACAAACCGCGAAAAAGATGAGCATATACTACAATAAAGAAAAAAGAAGCACCATTAGCATG 60812
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
60813 AG-ATATCGGATAAACCAACCATAAGGACA---TCTCTCATAAATGCTCAACACTTAAAAAAGCTAAAATGCATTTGAGCAATAAAACAT 60898
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
60899 AACAAGAAAAATACCAGTAATAATTTGTATGCCAATACAACTAAGCATATATAC---CAAAGTTATATTATAATTCAAAGTTGCAGGCTG 60985
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
60986 GATAAGTTATGGCTGTAT 61003
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61954
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.10
61955 ACAAAAAATTTTATTTGTAAAAAAATTACCATAAAAAAT---TTTATCCGTTTTTATCCAGGTCATGTGAATAAAATTATCAATATTATT 62041
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
62042 AATACTTCTCTAAAAAAAGTATCACCACAAGCACTTATTGAACAAAATCGAATAGAAGCTAATAAAATGATTATTTATGCATTCTGCGAA 62131
31 S T N Q K M I Q - K N I E K I D S Q R L P E I I G Y F L S E 59
62132 CATTTTAAAAATGATAACTTATCTGATTTA---TTAGATGATCACAAAATTATTAAT---CGTATGCATGATTTTATTCATAAACAACCA 62215
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
62216 ACTCTTAGTTCAAGAGCATTT 62236
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62410
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
62411 TTGAATTCAAAAGATATTATT---GTTAATAGTACACCATTATATTTAACAAAAGATATTTCTCCTGAAATAAAGGCC------AGCATG 62491
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
62492 GAATTTAATAAAAATTTAACAGGAAATTCGTGTCCTGATATTACTTTAAAAGAACATCCT---TAT---GATTTTAAAGATTCAAAGGAT 62575
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
62576 ATAAAATGGAATAAA---AATCAGATTTATTTGGTTGATAATACTAGTTTTAATGAACAGGCTATAATAATGTTAAATCATTTGGAAAAA 62662
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
62663 TCTTTGATTAATCAATTA 62680
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 7100
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.09
7101 TTTTTTGGTACAATAATACAAAAATTATTTAAATCATCAAGAGTAATATTTTCTTTGGTGATTTCTAAAGGATTTATAAAAATTTGACTT 7190
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L - T 29
7191 TTTGGCTGTAATTCTAAATACGCTCGCCCGTGTTTCGTAAATATTAAATCATTATCTTTATTACCAATACGTATATGACCATCACTTTCT 7280
30 V S T N Q K M I Q K N I E K I D S - Q R L P E I I G Y F L S 58
7281 GTTTCAATAATAACTGCAGGAGATTTTGTTATTTTTATCAAGTTACGTTTT---TTTAATTCATCAATA---AGTTGCTGC------TTG 7358
59 E K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L 88
7359 GTTAATTCTTCCATACTTGTTTTT 7382
89 R K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 11413
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 38 Length-adjusted: 0.40
11414 TTACATAAT---ATTTATTTAAATATTCTAATAATAATTCAGGAGATTTTTTATATTCATTCACAGAT-AATTTTGGATACCTTTTATTT 11499
1 M S N K L Y L R I K K T N Q H L - Y A Y V L H N G K Q L L T 29
11500 TTAATAAAAGATATTATTTTAATTGTTAAAAAT---AACACTATAATTAAAATTAGAATGTTTAACATATTTAAA---TTTTTAAAAGGG 11583
30 V S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E 59
11584 AAAAACATTAATTCTCATTCTAAACATCGTTTTATGAAGAAAATCAAGTATTTTAATAAGAATATTACGTTATCTTGTGGACCATCAATA 11673
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
11674 GATAACCATTCTATCATTTTT 11694
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 15630
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
15631 TTTTTCTTTGATATCTTCATTAAAACTTTATCTGATATTATACATTTACATTCTTGCATAAAAGAATCAGGAAAAGAATAAGTATCGGAA 15720
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q - L L T 29
15721 ATTGCACAAGGAGTCACTTCATATTTAAAAGCCATTTTTTTTAAATATGACTTTAAACATGAAATAGTAATTTCAGAATTAAATATTTTT 15810
30 V S T N Q K M I Q K N I - E K I D - S Q R L - P E I I G Y F 56
15811 TTACAAAGTAAATTAGAAATTTCTGCTAAATTCAATGCATAT---AAATCATTACGG---TTTATGTCAAATTTAGCTAAATACTTAGAA 15894
57 L S E K I K E S G L S N I Y L K K T Y L F H G K V K T V V E 86
15895 GTTTCGTCAGATAATGCTTTTGTAATAAAT 15924
87 E L R K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 29668
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.06
29669 ATCTGCATTTTTCATAGTAAGCGCATATTTAAAGAGATTCTATTTCTTCGC---TATTTGCTGAAGAAT---ACTTTTATAGTTGTTATA 29752
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
29753 TCTTCT---ATGGATACTATCGAGGAAAACGTAAAGAAG---AATTCTTCCCA-ATGATAGATTCAGTCCATATCTTTTTTTCATTTAAC 29835
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
29836 TTATTTTTATT-TTATTAAGCAAAATTTTTGTAATATTTTTATA-ATACTTTTTGGGAAATAT---ACTTTCAATAA-ATATTAATTAAA 29919
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
29920 AACATAATAATTATTTTA 29937
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 29668
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.06
29669 ATCTGCATTTTTCATAGTAAGCGCATATTTAAAGAGATTCTATTTCTTCGC---TATTTGCTGAAGAAT---ACTTTTATAGTTGTTATA 29752
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
29753 TCTTCT---ATGGATACTATCGAGGAAAACGTAAAGAAG---AATTCTTCCCA-ATGATAGATTCAGTCCATATCTTTTTTTCATTTAAC 29835
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
29836 TTATTTTTATT-TTATTAAGCAAAATTTTTGTAATATTTTTATA-ATACTTTTTGGGAAATAT---ACTTTCAATAA-ATATTAATTAAA 29919
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
29920 AACATAATAATTATTTTA 29937
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32184
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.18
32185 ATTCATCTATCTACATTCTTGCATAATATGCGC---AACCAATTCCGCAATGCGTATACAATCCATAAAAGTAAT---CTAAATCTGTTA 32268
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
32269 AAGGTTAATCTAGAGCTTCAATGGAATACAACATATGAAGCTGCAATTGCTGCACTCTTTGCCAAAATATGGAAGTTTATTCCGAGCAAT 32358
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
32359 ATCACTCAATTTACAGACCTCCATTATTTTCTTAAATTGCTAGTTATCTTTAC-ACAAGGACCTCATCCTACAGATGTATCTTTGAAAAA 32447
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
32448 TCCTCTATTTACTCCCAA 32465
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32633
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.07
32634 CTTTCCCATCAGTTGAATCTAAAGTTCCCTAATACGAA-GTAAAGTTAAT-CCATTAATAATTTCTCAAGATTCTCAGTGGTGTAGTGCT 32721
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
32722 ATTGCGAAT------ATCTTTTTAAAAGATGCTAATTTGGCAGATTACTTAAAGATATTTCCCGTAGGCGCAAAGTATTTAAGTTCCTTT 32805
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
32806 GAACAGAAAACAATATTATTTTTTATTCGCTTAAATGTAATTCATCACGCGACAGGATTGCTTTCAGATACTTCCAAGTTAATATTTAAT 32895
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
32896 GAAAATATTACCAAATAT 32913
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32920
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.08
32921 ACCTCTGAACAAAAGAAGCAAGTAGAAGGTTATCTTTCTGAGCATATAAACTTATTTGTAATTCAAGATTTTATTCTAAGTCATTATCAA 33010
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N - G K Q L L T 29
33011 GTGCCTCCAACAACATTTACGGGTAATTTTCAAATATCCAAACTTATTAATAAACCTTTAGACAAGTTTTTTGGATCTACCTTATCAAAT 33100
30 V S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E 59
33101 AAT---TCTTATTCACTTCTTATCAATTATTTAACAAGTACAACTAAGATTATCTTCTTACATGTTGAAACACTAATTTCTCAAGCCCAG 33187
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
33188 TCCTCTTCACTACGTCCACTC 33208
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33151
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.18
33152 TTATATCATACATCATATCGCAAATTCAAA---TTAGCACCGGATTTATACGTTTCTGCAATAAACAATATAAGTCCAATGTTTTATCAA 33238
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
33239 CAGTGCTTATCAACCCTTAAACAAACCATGATAGATCATTTACGTTTTACGCAAAATAAACCTACGGATCTAACTTATTATTTTTATCTT 33328
31 S T N Q K M I Q K N I E K I D - S Q R L P - E I I G Y F L S 58
33329 ATCAAACTAATGTTTTTTCCAGAAGAATCAGATAGTTATAAA---GTACCGTTATTTACCTCTGAACAAAAGAAGCAAGTAGAAGGTTAT 33415
59 E K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L 88
33416 CTTTCTGAGCATATAAACTTATTT 33439
89 R K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33682
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.11
33683 ATACAAGAGCAACTG---CTTGCGTATACTAAAACGAAC---CACGAGAAGTTACAAGAACTTTATAAT---CGTCAGGTTATATCT--- 33760
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
33761 CATGTGCATCCCGAGACTACACATACAGCCTTATTTCAAACGTATGTCCAAATAACAAGTTATCATGGAAAAACAACAATTCCAAATGCT 33850
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
33851 TGTCAACTAAGTCGCTTAATTAATAGTATGACGAAAAATACAACATTGTACTTTAATCGTCTAATTCTCTTAATAGAT---TTAGAGCCT 33937
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
33938 ATCTTAATGAATGGTTTT 33955
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33760
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.28
33761 TCTCCGAATAAAAAAAGCTTATCACAACCGAAAAGGTATCAACTAGATTCCTTGCATGTAATACAAAATAAATTGAATCCACAGATACAA 33850
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
33851 GAGCAACTGCTTGCGTATACTAAAACGAACCACGAGAAGTTACAAGAACTTTATAATCGTCAGGTTATATCTCATGTGCATCCCGAGACT 33940
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
33941 ACACAT---ACAGCCTTATTTCAAACGTATGTCCAAATAACAAGT---TATCATGGAAAAACA---ACAATTCCAAATGCTTGTCAACTA 34021
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
34022 AGTCGCTTAATTAATAGT 34039
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37123
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.08
37124 ATTAGTTTAACAGGTTCTTTATTATTGCAAATGCTCATGGGTTTCTTCTTCCGCTTTATTTTTAGCAATGGAATGTTATATGATGATATA 37213
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
37214 AATCACGTAATATTTCTATTATCGTGGTTTGTTACT---GTTAT-GCCAATATTTTGTTTCTTCTTTTTTATTTTTTCTTTAGCGAA--- 37296
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
37297 TTTAGGGTTTCTTCTACTGTTAATTTTATTCTGAAATGTTAATATTTTTTGGCTTATTTCAAACAGTCCTTCTATAGCTATTTAACTTTA 37386
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
37387 ACAGGTATTTCTTATCTG 37404
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37296
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
37297 CTTTCTCTTTTCTTATTCCTAATGCTTCTTTTTATTTCTACC---ATTAATATTATAGTTGCTGTGATATCAATTATATTAGCTCTTTTA 37383
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
37384 CAGTTTACGTCAAAATGATTTAAAAAGGATTATTGCTACTCATCTATTGCACATATGAATTTTTTAGTGGGCTATTTTTGTAAAAGATTT 37473
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
37474 ATTAGTTTAACAGGTTCTTTATTATTGCAAATGCTCATGGGTTTCTTCTTCCGCTTTATTTTTAGCAATGGAATGTTATATGATGATATA 37563
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
37564 AATCACGTAATATTTCTA 37581
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37987
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.06
37988 ACTGCAAATAAAACTATAATGTTCATAATTATTCCTTGCAGCTTCTTTTAT---TATATTTATTATTCT---ATAGGATTATTACAAATA 38071
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
38072 CATTGT---CTACATCTATTATATAAATACTA----ATTATTTGTTCTGATGTCCTTTCATCTTTTGTGATAACTTATCTTACATGTTAG 38154
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
38155 ATTTTATATAGTAATTTATATTATTT-TATCTACTT---TTTAGGATGTTTAGTTGTCTTATTACTAGAGTAATTGAATATGTCTTAAAG 38240
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E - L R 89
38241 AAAAATATATATTTTATTTTT 38261
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 40034
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
40035 ATTACTGAGTATTGCTATCATATATTTAAAGAAATTTTAACTCTCGGATATAACGTTTCGCTCGTAATTGTGGAGAACATA---ACTAAA 40121
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
40122 TCCCCAAATATATCCTTATTTCGTAAAAGA---CGTAAAGTATTATA-CATAAATTA---TTACTGGTA---TTTCACAGAAAGAATTAC 40201
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
40202 CAGTCTTATAGTGGCATTCATGATACTATCATAGCAGAAAAACGGCTGTCATTTACCAGGATGAGTTACGTAATCCAGAAATATAGGTAA 40291
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
40292 AATAAGCTTTTA---TTT 40306
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 40073
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.14
40074 AATACGGAAATTAGAACGGTTCT-TTTAAAAATATTAATGATTTTATTACTGAGTATTGCTATCATATATTTAAAGAAATTTTAACTCTC 40162
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
40163 GGATATAACGTTTCGCTCGTAATT------GTGGAGAACATA---ACTAAATCC---CCAAATATATCCTTATTTCGTAAAAGACGTAAA 40240
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
40241 GTATTATACAT-AAATTATTACTGGTATTTCACAGAAAGAATTACCAGTCTTATAGTGGCATTCATGATACTATCATAGCAGAAAAACGG 40329
61 I K E S G L S N I Y L K K T Y L - F H G K V K T V V E E L R 89
40330 CTGTCATTTACCAGGATGAGT 40350
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 41757
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.06
41758 TTGTACGATAAAGTCTACCTCTAC---AAAAGTTTT---AAGCAT---TATCAAAAAATTACTTCATCTTACTCCGAATG-GTCTTTGTA 41837
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
41838 AATAGGAAAACACTTTTTCTTGATACCCTATTAAGAAAAATCCTTACGTAAAGATGTCCTTTGAAATATAATCAGTTAATATTCGACGAA 41927
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
41928 ATCATTAGTATTGTTCTATTAGAAAAAAATATACCAAATAAATCGTAATTTCACGTTCAAGCCAAATGCTGATGGAAATAAATCAATTAT 42017
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
42018 AATGGTGTTGTTAAATTG 42035
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 43260
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.10
43261 ATTGATGATAGACTTTTTATAAGAAATGCACGTGATATCAAATATTATTTTCCTTATTCT---AAAAAAATAACAAGCTTTTTAGGAGCT 43347
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
43348 GCTAAGTATTTTTAATCTATTATTAAATTTGATAAAAAAATATATATACATATGTTTAAAGTAATAATTATTAAGATTAGAATTAATAAA 43437
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
43438 GTCTCT---TA-AATTTAGCTCTTATAATTTTTAATAAATATCGTCTTTTTAAATGTCTAATTCGTTTATACCACTTCGTATTAATGGCG 43523
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
43524 AACCGATTAATAAAGATC 43541
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45127
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.11
45128 ATCATGGTTAAAATCACATGTAAA---AAAAAAAATAAAAATATATTATATGCAAAAATCTTA---ATA---GAAAGTTTAATAACTAAG 45208
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
45209 AATTTTAAAAATCTGATATATGAGAAGGATGCTACATCAAGTGGCCTACAGATAAT-AGCGATGTTATTGGTTCAGAATCTTCTGAT--- 45294
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
45295 ATTTATCAGATAGCGATA---AATTCCTTTATTTATAAAATTGAAATTCAACGTAAATTTTTAGAATCCTTCTTTTTAAAGATTTTAAAT 45381
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
45382 AAATCGTTAGTAGAGTTT 45399
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45551
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.24
45552 CTGCATAATGGTTTCGATCTT---GTTAGGAAA---AATTTCAAAATAACACAAAAATTATTATTTCAAGAAATCTTGTATAATGAAACA 45635
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
45636 AAGTTTTTTGCCAAATTAAAAGCTGCTAAT---CCTACACTGGATATCAGAAAATTT---AAAATAATTCCTTTAACGATTTTGAAACGT 45719
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
45720 TATTATCTTTCTGATAAATATAATTTTAAAGAAACAAAG---TACTTAGCTCAACAACAGCAAGCATTTTGTTTGTTCGAGTATTACAAA 45806
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
45807 AACGGTTATATTATTATT 45824
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45874
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 28 Length-adjusted: 0.29
45875 TGGTATCCGAAAATTCGGAGCCGTTTAAAACTTTCGATAAACGAG---TACGTATACTTTCA-AAACGTTTAAGGACTCTTTTTAGTATA 45960
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
45961 GTATATTTCTTATCCCCAATCTTAGCCAATTTTGAATCGTTTAATTCGTCCAGGGCATCAGATATTAATATTTTCGCTTCGGAAGGTAAC 46050
31 S T N Q K M I Q K N I E K I D S Q R L P E I - I G Y F L S E 59
46051 ACGTTAGCTCTTTTACCGCTAACAAGAATATATACAGAAAATAGATATTTTTTTTCAGGATTCTTG---AGTTGCCTAGCATTTTTGATA 46137
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
46138 AGTTCATTGATTATTAAACGC 46158
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47770
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.06
47771 TCTTTGGTAAAGGAATATTTATCAGCCTTGAAAGATAATAAAGATGAGACAGCATACAAA---AGAATAATTCCACAAAATTGGAATGCA 47857
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
47858 AAAACTCGTCAAGATATGATAACGTATTTGGACGTTTATATTTCCGAAGAAGAAGCTCTATTTGATAATCCTACTTACATATCTTCTAAG 47947
31 S T N Q K M I Q K - N I E K I D S Q R L P E I I G Y F L S E 59
47948 GAAAAGAAAATAAAACTTGAACTTAATTTGGGATTACAGATCCTTAATTGGTTGATAGAT---CTAAATATTCTTCAGGAAGAAATAGAT 48034
60 K I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R 89
48035 AAGCGTAATGTTCCTCATATT 48055
90 K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47833
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
47834 ATTCCTAAAAAAATA---TTGAGTTTACTAAGAATAAATTATCT-TTGGTAAAGGAATATTTATCAGCCTTGAAAGATAATAAAGATGAG 47919
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
47920 ACAGCATACAAAAGAATAATTCCACAAAATTGGAATGCA---AAAACT---CGT---CAAGATATGATAACGTAT---TTGGACGTTTAT 47997
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
47998 ATTTCCGAAGAAGAA---GCT---CTATTTGATAATCCTACTTACATA---TCTTCTAAGGAAAAGAAAATAAAACTTGAACTTAATTTG 48078
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
48079 ---GGATTACAGATCCTT 48093
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 48931
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.10
48932 TTTATATCCCGCTTCTTGCTTTACACCAGGAAACAAAACTATCACGTACCTAAATACATTTCGCAGAAAACCAGCTATCTCCTA---GTT 49018
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
49019 TG-ATTAGCCTCACCCCTAATCACAAGTCATCCCATTCTATGCAACAGAAAAGGGTTCATCCTCCAAAAGTTGTTAACTCATTTCAATCT 49107
31 S T N Q K M I Q K N I E K I D S Q R L - - P E I I G Y F L S 58
49108 CTCATGATTAGA---TCACTAGTTTCGGGTTTAAATGAAAAAACTCAAACGAT-TTAAAATTTGCTTTCCTATGCTATATAATATATAAG 49193
59 E K I K E S G L S N I Y L K - K T Y L F H G K V K T V V E E 87
49194 CTTGCTTTTTCATTTATCTCGTTGATC 49220
88 L R K N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 49811
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
49812 CTTAGCAGTCCTGTGTTTTTA---ATAAAC---AGTCGCTACCCTCTATTCTGTGCCATCACACATAAGATTTCACGAGTAATTTTCTAT 49895
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
49896 AAAGAAAATGAAAGAAAATACTGTGCTTTATATCATATAATTTCTTT-GATACTCTAACTCTTATGGTA---TTTACGCTTGT-TATAAA 49980
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
49981 AACAAGGAAAATTATATA------ATCTTTCTCCAAAAGTTACAGATTGAATTTGCC---GTTCCTTTAGTATAGTTAATCCATCGCCGC 50061
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
50062 AGTAATTTACTAGTTTAC 50079
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 52216
Protein: lcl|KC353356.1_cdsid_AGH24278.1 [gene=rpl18] [protein=ribosomal protein L18] [protein_id=AGH24278.1] [location=27735..28025] @ 0
DNA length: 576 Protein length: 96
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.05
52217 AAAATTGGTAAGGTT---TTGCGCGGTATTCGAATTAAACCACATCTCCACCCC---TTGTATAAGTCACCGTCAATTCCTTTGAGTTTA 52300
1 M S N K L Y L R I K K T N Q H L Y A Y V L H N G K Q L L T V 30
52301 ACCTTGCGGCCACATTCC---CCAGGCGGTGTTTCACGCGTT---AGCTTTAAACCCCCTAAATATATTGACTAT---ATTAAAGAC--- 52378
31 S T N Q K M I Q K N I E K I D S Q R L P E I I G Y F L S E K 60
52379 GTTGAACACTCA---TTGTTTAAGGTATGGACTACTAGGTCT---CTAATCCT-ATTTATCCCCATACTTTAGTACCTAGCGTTAGATCA 52461
61 I K E S G L S N I Y L K K T Y L F H G K V K T V V E E L R K 90
52462 GAATCGGATGTTGCTTTC 52479
91 N G I I I F 96
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1
Protein: lcl|KC353356.1_cdsid_AGH24279.1 [gene=secY] [protein=SecY-type transporter protein] [protein_id=AGH24279.1] [location=28068..29330] @ 0
DNA length: 1260 Protein length: 420
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.01
2 CTAGAAGAACTTAGAGTTAACTATTCTACAAATGAATATAACAAT---ATTAAACTAGATCCTGGAACGCTCACAGATGTTAAAACAAGA 88
1 M F D R K E I S S R I L F T F F I I F L L F V F R N I T L P 30
89 AAAGCTATTGCTTCAATGACTGAATGGAATCCCTTCTTAAGAGAT---AAGGTTCAAAAAGCTATACATAGCTCCTTGTCCCATATATTA 175
31 G I E L E I L T K N I G V K I I D I T N I V N G N A K F S M 60
176 CCTGATTCTTCCGA-AATATTATGATAACATATCTTTTACTTAATTCCTTTTTATTGATT---AAA---CTTATTTTATTTATTTTAATT 258
61 L G L S I T P I I T C L L I Q Q L I Y I F S S L N I F T F K 90
259 ---AGA---ATTTTTCTAATTCCAAATATTTTTTCTAAATATATAATTATTATTTTTTTTAGTATTATTATATACATATGTTATAAATAT 342
91 S K N I Y F D R N H F D K Y - F I Y Y F I L I S Y V - E G I 118
343 CCTCGTACCAATATATTAATTAAGGAAGATTTATTCGAATATGCTTTAAAAACAACTAAAGAAAAAATGATAAAT---ATATGTATCATA 429
119 I Y L K I I N N T L M S P F L Q D F L F D R I N Y F V C V T 148
430 ACGTTATATATATTTACTTTTGTTATAGGTATATTTTAT---CTTAGATATATA---AATATAACAAAAAAAGTAGACTTAAAAATTTAT 513
149 S L V L G S F I L Y S F A K L I N I Y G I G K G L S L I I F 178
514 TATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAAGAAGAAATTATTTTA---AATGTGGTAATAATAATAACTTTTATAATAATT 600
179 V N I I N T L M D V F Y R Y C T Q L P S N Y I Y I I F V Q C 208
601 TATATTTTT---ATAATATATAAATTTACTCAA---TATTTT---AAATTACAAGTAATTAAAAGACATCTTTACTTAATAGGAATACCA 681
209 F L C S L I Y F Y V D T L F V K I S I V K L D G F F C E N S 238
682 TTAAATAATAATTGGTATTCAACCGTTCATCGAAAGTATTTATGGCCTTTAGCA---AATTCTTTTCTTAAAATAAGTATAAAACATAAA 768
239 - N Y N Y L S F L D R Y R F L S L S L A G I L P I L L V N S 267
769 ATTGAGTTATTGTATAAAAA-AT-ATTATTTTGATAAAAAGCCTCATAAACCAAGACCTGATAATTTTTTTTCTTTATCTGAAGAGGCAA 856
268 F I Y F F K V N I V S Y G S I F - F N F I I E I L L M L L L 296
857 AAATTTTATTTTTTAAAAATAATCCTACATTACCTGAATTACTTTTTCATAAA-TACAAGAAAATGTCTATTTTCATAGATAATATTTTA 945
297 Y V F L S R V L K R F I K Y V Y L I G N N - N I Y I E N I E 325
946 ACAAAAGGTCATTATTTTATATTAATTATTAGTATTCTATATGATGTTATAAATAATGATTTTATT---TTGACTACTATA------TTT 1026
326 N K K Y L F L F L S D V F F K I F L R D Y C C L C F I L L F 355
1027 CAAATATTACCTTGGATATTTTTTTATGAACTT---TTTCTAAGAATATCTAAATTT---GTAGATGACATTTGGATACCATATGATCAA 1110
356 S K L I F I G L Y F F N F F E D S M F L I S D M N L L L I Y 385
1111 GCATTACATAATTTGATATATAGTAAAAAATTAAAATATATAAACGAAGAAACATTAATGATAGATGATGAACCACATGATATGTCTTTT 1200
386 E T N N T F M F L Y L I F F R I L I L I F Y R I K Y L M V R 415
1201 TACCAA---GATATA 1212
416 K E L D I 420
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1
Protein: lcl|KC353356.1_cdsid_AGH24279.1 [gene=secY] [protein=SecY-type transporter protein] [protein_id=AGH24279.1] [location=28068..29330] @ 0
DNA length: 2520 Protein length: 420
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.01
2 CTAGAAGAACTTAGAGTTAACTATTCTACAAATGAATATAACAAT---ATTAAACTAGATCCTGGAACGCTCACAGATGTTAAAACAAGA 88
1 M F D R K E I S S R I L F T F F I I F L L F V F R N I T L P 30
89 AAAGCTATTGCTTCAATGACTGAATGGAATCCCTTCTTAAGAGAT---AAGGTTCAAAAAGCTATACATAGCTCCTTGTCCCATATATTA 175
31 G I E L E I L T K N I G V K I I D I T N I V N G N A K F S M 60
176 CCTGATTCTTCCGA-AATATTATGATAACATATCTTTTACTTAATTCCTTTTTATTGATT---AAA---CTTATTTTATTTATTTTAATT 258
61 L G L S I T P I I T C L L I Q Q L I Y I F S S L N I F T F K 90
259 ---AGA---ATTTTTCTAATTCCAAATATTTTTTCTAAATATATAATTATTATTTTTTTTAGTATTATTATATACATATGTTATAAATAT 342
91 S K N I Y F D R N H F D K Y - F I Y Y F I L I S Y V - E G I 118
343 CCTCGTACCAATATATTAATTAAGGAAGATTTATTCGAATATGCTTTAAAAACAACTAAAGAAAAAATGATAAAT---ATATGTATCATA 429
119 I Y L K I I N N T L M S P F L Q D F L F D R I N Y F V C V T 148
430 ACGTTATATATATTTACTTTTGTTATAGGTATATTTTAT---CTTAGATATATA---AATATAACAAAAAAAGTAGACTTAAAAATTTAT 513
149 S L V L G S F I L Y S F A K L I N I Y G I G K G L S L I I F 178
514 TATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAAGAAGAAATTATTTTA---AATGTGGTAATAATAATAACTTTTATAATAATT 600
179 V N I I N T L M D V F Y R Y C T Q L P S N Y I Y I I F V Q C 208
601 TATATTTTT---ATAATATATAAATTTACTCAA---TATTTT---AAATTACAAGTAATTAAAAGACATCTTTACTTAATAGGAATACCA 681
209 F L C S L I Y F Y V D T L F V K I S I V K L D G F F C E N S 238
682 TTAAATAATAATTGGTATTCAACCGTTCATCGAAAGTATTTATGGCCTTTAGCA---AATTCTTTTCTTAAAATAAGTATAAAACATAAA 768
239 - N Y N Y L S F L D R Y R F L S L S L A G I L P I L L V N S 267
769 ATTGAGTTATTGTATAAAAA-AT-ATTATTTTGATAAAAAGCCTCATAAACCAAGACCTGATAATTTTTTTTCTTTATCTGAAGAGGCAA 856
268 F I Y F F K V N I V S Y G S I F - F N F I I E I L L M L L L 296
857 AAATTTTATTTTTTAAAAATAATCCTACATTACCTGAATTACTTTTTCATAAA-TACAAGAAAATGTCTATTTTCATAGATAATATTTTA 945
297 Y V F L S R V L K R F I K Y V Y L I G N N - N I Y I E N I E 325
946 ACAAAAGGTCATTATTTTATATTAATTATTAGTATTCTATATGATGTTATAAATAATGATTTTATT---TTGACTACTATA------TTT 1026
326 N K K Y L F L F L S D V F F K I F L R D Y C C L C F I L L F 355
1027 CAAATATTACCTTGGATATTTTTTTATGAACTT---TTTCTAAGAATATCTAAATTT---GTAGATGACATTTGGATACCATATGATCAA 1110
356 S K L I F I G L Y F F N F F E D S M F L I S D M N L L L I Y 385
1111 GCATTACATAATTTGATATATAGTAAAAAATTAAAATATATAAACGAAGAAACATTAATGATAGATGATGAACCACATGATATGTCTTTT 1200
386 E T N N T F M F L Y L I F F R I L I L I F Y R I K Y L M V R 415
1201 TACCAA---GATATA 1212
416 K E L D I 420
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9874
Protein: lcl|KC353356.1_cdsid_AGH24279.1 [gene=secY] [protein=SecY-type transporter protein] [protein_id=AGH24279.1] [location=28068..29330] @ 0
DNA length: 2520 Protein length: 420
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 33 Length-adjusted: 0.08
9875 CTAATTAATAAAAAACAAGAGCTTTCTAAACTATTAGATTATTTATATATCAAAGATATAAAAATGGAAATATTAGATTTATTTTTA--- 9961
1 M F D R K E I S S R I L F T F F I I F L L F V F R N I T L P 30
9962 ---TTAAACTTATTTACAATAGGATTGATTTTTTCCTTAAGAAATCTTAATATTGGAGCAACCATAAAT---ATTTTCTTATTTCGACCA 10045
31 G I E L E I L T K N I G V K I I D I T N I V N G N A K F S M 60
10046 AGTCTTGTAATATTATCGCAAATTATTTCACTTTGTGTATTAATGTATGTTTTTTACATTTATAAC---TTA---GTTATAAAATACAAA 10129
61 L G L S I T P I I T C L L I Q Q L I Y I F S S L N I F T F K 90
10130 TTTTACAAAATTTATTTATTTATGTGCCAATTTGAAACT---TTTATAAAA---ATATGTGACATT---TTTACAGGTGGATATCGATTC 10210
91 S K N I Y F D R N H F D K Y F I Y Y F I L I S Y V E G I I Y 120
10211 TATGAACTTTTATACGATAACTTACATGATTTTATTTATATTAAACTAAAACCAATTAATAAAATAAACTCTTCTTATTTACAAGTGCTA 10300
121 L K I I N N T L M S - P F L Q D F L F D R I N - Y F V C V T 148
10301 ATGATAATACTATGCAATAAGATCTTGTACATATATGCTTATATAAAAAATATCTTCTATATTTTACGAGCATTTTTTCCTGAAATTTTA 10390
149 S L V L G S F I L Y S F A K L I N I Y G I G K G L S L I I F 178
10391 TTA---TTTATAAGTTTGATATCTGATTTAAATAATAGA---------GAAATAAAAACATTTTAT---TATATCTTAGCTATATACCCA 10465
179 V N I I N T L M D V F Y R Y C T Q L P S N Y I Y I I F V Q C 208
10466 TTAATGACATCT------TATAGGACCATTAAAGAAATTCTAGGAGACTATGATATGTTAAATATAAATGATAAATTAACTACATATTTT 10549
209 F L C S L I Y F Y V D T L F V K I S I V K L D G F F C E N S 238
10550 ---TATGAAGAT---AAAATACACGATAAATTGAGA---AAAACAATAAGTGAATATGAACGTACTAGAATATTA---ATACAAAGTATG 10627
239 N Y N Y L S F L D R Y R F L S L S L A G I L P I L L V N S F 268
10628 ACTCTTTATTATAAATATGATAAACAGATAAGAGAATATATATTAAGAGATTTCAAAAGAATATATCAGCCATATAGTATGCGTTTAATC 10717
269 I Y F F K V N I V S Y G S I F F N F I I E I L L M L L L Y V 298
10718 TTTTTAGGA---ATATTAATATTATATTATAATTTTTGTTATAGTATGTCATACTATAATTGCATGATAATAACAATACCTTTATTATTA 10804
299 F L S R V L K R F I K Y V Y L I G N N N I Y I E N I E N K K 328
10805 AGTTTTATATTATATGAGCATAGTTATCAATATTTAGTGAATTTTAGA---TATTTATGGATAATAAAAATATTATATTATACTAATTTA 10891
329 Y L F L F L S D V F F K I F L R D Y C C L C F I L L F S K L 358
10892 ATATTGGTAATATATATATTTATAATAATATATTTGTCAAGGAATACATTATATTTTATAACCGATAATATACATATATTCAATTTTGAA 10981
359 I F - I G L Y F F N F F - E D S M F L I S D M N L L L I Y E 386
10982 CTTATTCAAGAATTTAGCCAAAAAGAAAAATACGACTTTTTCATAAAATATTTAAAT---TATACCCTG---TAT---ATGGAACGAGAA 11062
387 T N N T F M F L Y L I F F R I L I L I F Y R I K Y L M V R K 416
11063 TTTCATTCTATA 11074
417 E L D I 420
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10696
Protein: lcl|KC353356.1_cdsid_AGH24279.1 [gene=secY] [protein=SecY-type transporter protein] [protein_id=AGH24279.1] [location=28068..29330] @ 0
DNA length: 2520 Protein length: 420
1 Nt shifts: 6 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.04
10697 CCATATAGTATGCGTTTAATCTTTTTAGGAATATTAATATTATATTATAATTTTTGTTATAGTATGTCATACTATAATTGCATGATAATA 10786
1 M F D R K E I S S R I L F T F F I I F L L F V F R N I T L P 30
10787 ACAATACCTTTA---TTATTAAGTTTT---ATATTATATGAGCAT---AGTTATCAATATTTAGTGAATTTTAGATATTTATGGATAATA 10867
31 G I E L E I L T K N I G V K I I D I T N I V N G N A K F S M 60
10868 AAAATATTATATTATACTAATTTAATATTGGTAATATATATATTTATAATAATATATTTGTCAAGGAATACATTATATTTTATAACCGAT 10957
61 L G L S I T P I I T C L L I Q Q L I Y I F S S L N I F T F K 90
10958 AATATACATATATTCAATTTTGAACTTATTCAAGAATTTAGCCAAAAAGAAAAATACGACTTT---TTCATAAAATATTTAAATTATACC 11044
91 S K N I Y - F D R - N H F D K Y F I Y Y F I L I S Y V E G I 118
11045 CTGTATATGGAACGAGAATTTCATTCTATACGTACATCAACCTTTTTAAATACAATAATGTCTGATAAAAACTATTATGAAAATTTATTA 11134
119 I Y L - K I I N N T L M S P F L Q D F L F D R I N Y F V C V 147
11135 TTATCCCTAGATATTAATACAATTAAAGTATTGGCA---AAAGAATTACTTACAATTGCTATTATAGTAGAAGATCGTTTTATAGAATTA 11221
148 T S L V L G S F I L Y S F A K L I N I Y G I G K G L S L I I 177
11222 GATGAAAAGCTAATGATTGAAACTATATCAGAATTGAT-AGAAGA---ACTCAGAC-AAGAGGAATTACAAAGAATTATAGATAAAAATC 11306
178 F V N I I N T L M D V F Y R Y C T Q L P S N Y I Y I - I F V 206
11307 CAA---TTACTA---AAATATATAACAAAATAGGAGAATTCTTAAATAGTCAAA---AATTTGAATGGATATGATGGGTTTTTTAAAATT 11387
207 Q C F L C S L I Y F Y V D T L F V K I S I V K L D G F F C E 236
11388 GTTATTAACAGATCCTTCTTCACA---CAAAAAATGATAGAATGGTTATCTATTGATGGTCCACAAGATAACGTAATATTCTTATTAAAA 11474
237 N S N Y N Y L S F L D R Y R F L S L S L A G I L P I L L V N 266
11475 TACTTGATTTTCTTCATAAAACGATGTTTAGAATGAGAATTAATGTTTTTCCCTTTTAAAAATTTAAATATGTTAAACATTCTAATTTTA 11564
267 S F I Y F F K V N I V S Y G S I F - F - N F I I E I L L M L 294
11565 ATTATAGTGTTATTTTTAACAATTAAAATAATATCTTTTATTAAAAATAAAAGGTATCCAAAATTATCTGTGAATGAATATAAAAAATCT 11654
295 L L Y V F L S R V L K R F I K - Y V Y L I G N N N I Y I E N 323
11655 CCTGAATTATTATTAGAATATTTAAATAAATATTATGTAACTAACATTTATTATAGTATTTTTAA-AATAATTATATATGTTTTTT-AAA 11742
324 I E - N K K Y L - F L F L S D V F F K I F L R D Y C C L C - 350
11743 TTAAGTATTATTTTTTATTTACGTTATTTATATTTAGGTCAAAATTTTATGTTATATAAGTCAGAAAATAGTATTATATATCTCTCTTCA 11832
351 F - I L L F S K L I F I G L Y F F N F - F E D S M F L I S D 378
11833 TTTAGTCG-ATTGTTATTTATGAGCATTTTAAT---TATAA-TTGTTATTTATAATTTTTATAAACTTTTGGATATTA---TTTTTTTTG 11914
379 M N L L L I Y E T N N T F M F L Y L I F F R I L I L I F Y R 408
11915 ATGAAATTTTAAAACTATATCTCTATTTTTTTAGGCATA 11953
409 I K Y - L M V R K E L D I 420
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12013
Protein: lcl|KC353356.1_cdsid_AGH24279.1 [gene=secY] [protein=SecY-type transporter protein] [protein_id=AGH24279.1] [location=28068..29330] @ 0
DNA length: 2520 Protein length: 420
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 84 Length-adjusted: 0.20
12014 CTATTTATTTATTTTTTGATAGTATATGTAATTTTACACCGATTCCTGATGAATATTATTATGATGATCATT------ATATATATGATT 12097
1 M F D R K E I S S R I L F T F F I I F L L F V F R N I T L P 30
12098 GGATTTATAATTATACTTTTGTTACAAAATTATCACTAAATTTATTTATATATCAAAACACTTTTATGA---TACATTTATTTT------ 12178
31 G I E L E I L T K N I G V K I I D I T N I V N G N A K F S M 60
12179 TTAAATGTA---GTAAGAAAATGTTTCGTTTGTTATATATTCATTTACATTTTGATGCCTTTGGCAAATATTTACATATTTTATTATTA- 12264
61 L G L S I T P I I T C L L I Q Q L I Y I F S S L N I F T F K 90
12265 AGTATAGTTATTATTTATGAGATAATTCATACTAATATGTATTATACTTATTATATGCTTTTTATTACTTACATAATTAATGTAATATAT 12354
91 S K N I Y F D R N H F D K Y F I Y Y F I L I S Y V E G I I Y 120
12355 AAATATTATATTTTTGAGAAA---AAAAAAGATTTTATGTTTGATGGCTTGCTTAATAAA---AATTTTTAT---AATGTACAATATTTT 12435
121 L K I I N N T L M S P F L Q D F L F D R I N Y F V C V T S L 150
12436 ATATTTGCTAAT---AACAAAAGTACTTTAAACATGAAAACCAATATAGATTATTTATATTTTATGGAAAAATTAAAAGAAGAAACTACT 12522
151 V L G S F I L Y S F A K L I N I Y G I G K G L S L I I F V N 180
12523 ATTAAATATATTTTAAATGAT---TTTGAACAAGTACCAGAAGAGTTAGTCAATAAACAAATAAATCAAATGTACTTACGT---TTTAGT 12606
181 I I N T L M D V F Y R Y C T Q L P S N Y I Y I I F V Q C F L 210
12607 ATAATACTAATATTACTTTTTATG---ACAATTTTTCTT---TATGATGTTATTAGATATTCT---ATAATAATAAAAATACTTAATTAC 12687
211 C S L I Y F Y V D T L F V K I S I V K L D G F F C E N S N Y 240
12688 AATATATATTCTTTTTTTATTCTATTGCCATTAATTTTTATA---TTATATTCAGCAACTAAAATTTTTACTTTGTCTAATACAGCTGAA 12774
241 N Y L S F L D R Y R F L S L S L A G I L P I L L V N S F I Y 270
12775 ATTGATGATTTTACAGAATATGTCTTTAATAAAAAATTC---AATATTATTTCTTGGATTTTAATATCAATTCA-TTATTTATATTTTTA 12860
271 F F K V N I V S Y G S I F F N F I I E I L L M L L L Y V F L 300
12861 ATAATATTACAACCAAAATTTATTTTTATGGAAACCGAAATTTTATTTAATCTACCATATAG-TATAGTAACTATAACTCAAATATATAC 12949
301 S R V L K R F I K Y V Y L I G N N N I Y I E N I E N K K Y L 330
12950 TTCTCAAGAAAAAATTATGTATTTGTTTCATATTTC------GAATACTGT---TTG---TTTATTATTAATATGGATATAAATATGAAA 13027
331 F L F L S D V F F K I F L R D Y C C L C F I L L F S K L I F 360
13028 GAAAATTTAACTTATATCATAAGACAAATAGACTTTGAATATTTAATAACTGATTATATTAAACTTAAAGA-TTTAAAAATTTATGTATA 13116
361 I G L Y F F N F F E D S M F L I S D M N L L L I Y E T N N T 390
13117 TATGTTTATAGAAAATTATGTCTATTTAGAACTTTGTATCAATATTTTTATAACAAAATAATAACAGAAGTTGTACAAGAATTTTCTTTA 13206
391 F M F L Y L I F F R I L I L I F Y R I K Y L M V R K E L D I 420
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15733
Protein: lcl|KC353356.1_cdsid_AGH24279.1 [gene=secY] [protein=SecY-type transporter protein] [protein_id=AGH24279.1] [location=28068..29330] @ 0
DNA length: 2520 Protein length: 420
1 Nt shifts: 7 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.02
15734 TTACTTTGTAAAAAAATATTTAATTCTGAAATTACTATTTCATGTTTAAAGTCATATTTAAAAAAAATGGCTTTTAAATATGAAGTGACT 15823
1 M F D R K E I S S R I L F T F F I I F L - L F V F R N I T L 29
15824 CCT---TGTGCAATTTCCGAT---ACTTATTCTTTTCCTGATTCTTTTATGCAAGAATGTAAATGTATAATATCAGAT---AAAGTT--- 15901
30 P G I E L E I L T K N I G V K I I D I T N I V N G N A K F S 59
15902 TTAATGAAGATATCAAAGAAAAAGAAA---ACTATTGTATTTTTAAAAAAACTATTAATAGTTTTTTATGATTATGCTATAAATAAAATA 15988
60 M L G L S I T P I I T C L L I Q Q L I Y I F S S L N I F T F 89
15989 AATAAAAAAGAACCTTGGATTTTAGAAAATATCATGGATCGGATTATAATTAAACAAAGTACAATGGCAGATCTTTACGGAATGACAATA 16078
90 K S K N I Y F D R N H F D K Y F I Y Y F I L I S - Y V E G I 118
16079 GGAGGTAGTCGTAAATCTATTTCAAATGCGCTCATTGAAAAAATAATTGAAAAAGGAAAATTTGATATAAACCTTTCTTATATTCACATA 16168
119 - I Y L K I I N N T L M S P F L Q D F L F D R I N Y F V C V 147
16169 TTTTCTGATATATTATCTAAATATTATAAATAT---TTTTATAAAACTAATTATTTACCTTATTGTGATACTTATTTAACATTACGAGAA 16255
148 T S L V L G S F I L Y S F A K L I N I Y G I G K G L S L I I 177
16256 TTTCTAAAGAAAATGGAAGGTCCTTTAACAATGTCAACAGAATTTTTAACATGGTCATATAATCCAAGAAAAATGAAAATATTACGTATA 16345
178 F V N I I N T L M D V F Y R Y C T - Q L P S N Y I Y I I F V 206
16346 AATGTTGTAAAATATTCAAAAATAACAAATGACCTTAAATCTTTGAAACGACGTATGATTAACGTAGCATATTTTACAGGAAAAATTGAT 16435
207 Q C F L C S L I Y F Y V D T L F V K - I S I V K L D G F F C 235
16436 CAAACTAAAATATATAACTC----AGTTTCTGCTTTTATTATACATACAGAGGAAGCCCGATTAATGATGTATTTTATATATTCCTCAC- 16520
236 E N S N Y N Y L S F L D R Y R F L S L S L A G I L P I L L V 265
16521 AACAACTTAATAAAGCTTTAC---ACGAAAATTTAGGTATATCTTATTATTATACTCAAAATTATGATTGTTTTGGAATTAATTATAGTT 16607
266 N S F I Y F F K V N I V S Y G S I F F N F I I E I L L M L L 295
16608 TTATT-GTCTTTTTG---AAAATTCA-GTTAAA---ATTAAATT-ATAAAACTTGTTATACTCATGAATTATTTCCTTCTCTTTTTAAAA 16688
296 L Y V F L S R V L K R F I K Y V Y L I G N N N I Y I E N I E 325
16689 TTCTCAATACAACAGATCCTCATTATCTCACATTTGCACAGCTTCTCTTTGATCTTAATAAATCTCCTAACGATGATAATTATTGGGATG 16778
326 N K K Y L F L F L S D V F - F K I F L R D Y C C L C F I L L 354
16779 GTATCATTACAAGTCCTTATTTTGTTAAATTTTAATTATAGAGGTTTTTATAATAAC---TTTGTTTTTTCAATTATTAATCTGGGT--- 16862
355 F S K L I F I G L Y F - F N F F E D S M F L I S D M N L L L 383
16863 ATTTTTGATTCCTT-ACTAT-TTC---TTTCTCTATTTATACTTCTATAGCTATATTTTGCTACCTAAAGTCCCTTTTAAGAGA---GGT 16944
384 I Y E T N N T F M F L Y L I F F R I L I L I F Y R I K Y L M 413
16945 ATTAAGCGGTGCATTAGTTTT 16965
414 V R K E L D I 420
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1397
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.07
1398 TATATGCATGTAGAAGTTATCAAA---GATAATGATAATAATTTATTAAAAACATTGCCTTCAATAAAGATTATTCATAATTATTTTCTG 1484
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
1485 TATAAA---AGTAGTTATTTATATGAAGCTGGTTCAATATGTAAATCTTTATATAAAATAATGCCGACAACTAAATATTCG---GTAGTT 1568
31 R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H Y I 60
1569 AAAGATATTATTTTGGTGAAATATAGTTTAGATACTTCAGCTGATTATCAACCTTCTCAA------GATGAAGCCTCATATTTCCCTTCT 1652
61 E E N F L I E S E L R K N Q T Y N I K R L L D I K S Y R G L 90
1653 GATGATATTAATGATATGATACCAGTACAAATGCAAGATATACCTGTTAAATCCAAAGAGCCTAAAATAGAATATCCTAGAAGACCTAAT 1742
91 R H V H G L - P V H G Q R T H S N G K T Q K S L S K R R G I 119
1743 ATTGATCTT 1751
120 K I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2545
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.14
2546 GAAGTTGCACAAGATGTAATGTATCCCAAAGAAATGTCTAGTATTCCTACTGAA---AAAAGTGAAGAACCAATTAAATCTGCAGCAGTT 2632
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
2633 AAAGAAGAAGAAAAAAAAATA---ATAGAA---AAACTTATAGAAGCTGATACTATAGCGGAAAAAATACAAGGTAATTCTCATATTTTT 2716
31 R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H Y I 60
2717 AATCCATTAAGATTAGTTTATAACACCAGTAGTAAAGTATGGAATTAC---CTAAAAAAAAATGTTGAATTTAAATTCCATAAACCTGAG 2803
61 E E N F L I E S E L R K N Q T Y N I K R L L D I K S Y R G L 90
2804 TCTGATAATTATACAGTGCCTATTACAGCCGTTTATGATACAAAACAAGGATCATCCGATATTCAATATAATTTAGAAAAAATAATTAAA 2893
91 R H V H G L P V H G Q R T H S N G K T Q K S L S K R R G I K 120
2894 GATTTG 2899
121 I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3608
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.13
3609 AAATATCACAAGAGGCGTATCAGTCTTTTACTAAATATAAAGATAGCTTAGGATTTAAATATTTATTAGAATATCCAAAAACAGAAGAAA 3698
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
3699 TATTATTACGTATAAAAGAAAGGAATTTTTTTATTGCTAAAAATATG-GATTCTAATCCTAATGGAATTATTGCTTTAGCTCACCTATCA 3787
31 R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H Y I 60
3788 CATAATACATTAATTATTCCAAACCAAACCGAGAAAAATTTATATGTTAGGGTAGGGCTTGTTACTAGTACTAAAAGTGATTCTAATATT 3877
61 E E N F L I E S E L R K N Q T Y N I K R L L D I K S Y R G L 90
3878 AAA---ATTGATAGTTATCAAGTTACTAATGAGGATTCTAATAAACAAAATAAAGATCAAATG---TTTCGTATTTTTCCTACTTTTTTA 3961
91 R H V H G L P V H G Q R T H S N G K T Q K S L S K R R G I K 120
3962 ATTGTA 3967
121 I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4220
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
4221 TATATTCACTTCTTATTAAAAGTCACGAA-GACTATAATAAGGAAATAGATCGC---CTTAATGAATTAAAA---ACAAATTATTTGAAA 4303
1 M I H - L F G I N I D S N K K I P S A L K T V Y G L G D E K 29
4304 GATAGAAAATATAAACAATATTTTAAT---TCATTAACAGATGAAGAACAAAAATTAGTT---TCTCATATAAAAATTTTTCAAGATAAG 4387
30 V R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H Y 59
4388 ATTAAAGATGATAAT---ATACAAAATGAA---AAAAAACAAAAGAAAGAACTTATTAATCAACTTTTGGAA---AAAAATAAAAAAGGA 4468
60 I E E N F L I E S E L R K N Q T Y N I K R L L D I K S Y R G 89
4469 AAAGATAAAGAAGAAGGAACAGAAATT------TTA---ACT---GCAAAACAAAAAAAGGAGAAATATCTAAAGGATAAACAAAATATA 4546
90 L R H V H G L P V H G Q R T H S N G K T Q K S L S K R R G I 119
4547 AATAATATC 4555
120 K I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5150
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
5151 AGAATTTATGAAGTTGGATATAAATTTGATGATTCTCGTAAA---AAAAATACA---AAAGCTATTTATCATGATGAAGAAAAAACAATA 5234
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
5235 CGGGAATATATAGAAATTAAATTTAATAATATTATAGATTATTTACTTGATGAAGTTGATTATGAGTATGAATCAACTCCTTATTGTAAA 5324
31 R E L C S Y - M G L S T K L K L S D L N - E S Q I S K L C H 58
5325 AGTGAAGTCTATAATGAATATTGTTTAAATAAATATAAAAATAAAAAAGCTCTTTATACAAGTGAAGATTTAGATATTTTGAGAGCCTTA 5414
59 Y I E E N F L I E S E L R K N Q T Y N I K R L L D I K S Y R 88
5415 TATTGTGAGCTTATGCCAAATATT---ATTCATTTAAAAATGTTTTTATCTAGGATAGAAGTTGTATCGGAAGTATCCTTAATGAAAACG 5501
89 G L R H V H G L P V H G Q R T H S N G K T Q K S L S K R R G 118
5502 TCAAAAATAGTA 5513
119 I K I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5770
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.07
5771 ATGCAAATGATAATAATAATTTTAATAAATATATGTAAAATTATTACTTTCAAAGTAAAAGCAGATGAAAAAAATCATCAGGAAGTCTTT 5860
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
5861 GAAAATTTTAGAAAAATACTTAAAGAAGGTTTGTTTAATATATTAGAAAAGTTGGATTGTCTTGAAGATTCACAAACAATGAAGGAAATA 5950
31 R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H Y I 60
5951 GTAGAAACATTTATG---GATAAT---TTAATGCTGGAAGAATTATAT---ATTAAATACCTTGCAAAAGATGAAAAAGATTATGAAGGT 6031
61 E E N F L I E S E L R K N Q T Y N I K R L L - D I K S Y R G 89
6032 TTTATGAAAGAAAT-TCAATCATTATTAAAGGATTATCTTCTAAGACTTCA---AGAAATGAAAAAATTCAAAGAAAATATGAATAAATT 6117
90 L R H V H G L P V H G Q R T H S N G K T Q K S L S K R R G I 119
6118 CACCTTACG 6126
120 K I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7570
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.08
7571 CTCATAATAATAAATCCCAACAATTACGT-TTTTTCAAAAATATACAAGTATTAGATAAAAATGAGGCTTATGTAGCCAAGTTTGAT--- 7656
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
7657 CAAGACTATTTTTTTACAATGAGTCTTAATGTAAAAAAGGATTTAGTAGAT---AATTATAATAACTTA---AAAACTAAACATTAT--- 7737
31 R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H Y I 60
7738 GAGAAA---TATATGCCACAAACA---ATATCAAATGAACAATTATTAAATATGTGCAAAGATGTTGACAAAGAAGCTCAAAAAAAA--- 7818
61 E E N F L I E S E L R K N Q T Y N I K R L L D I K S Y R G L 90
7819 AAACCTAAACACCCTATGACTCTTGAACAACAGCAAAAAAAAGAAGTTGA-AAAACAGAAAAATCAATTATTTCAACTACAAAATAAAAA 7907
91 R H V H G L P V H G Q R T H S N G K T Q K S L S K R R G I K 120
7908 ATGATA 7913
121 I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10381
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
10382 GAAATTTTATTATTT---ATAAGTTTGATATCTGATTTAAAT---AATAGAGAAATAAAAACATTTTATTATATCTTA---GCTATATAC 10462
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
10463 CCATTAATGACATCTTATAGGACCATTAAAGAAATTCTAGGAGACTATGATATGTTAAATATAAAT---GATAAATTAACTACATATTTT 10549
31 R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H Y I 60
10550 TATGAAGAT---AAAATACACGATAAATTGAGAAAAACAATAAGTGAATATGAACGTACTAGAATATTA---ATACAAAGTATGACT--- 10630
61 E E N F L I E S E L R K N - Q T Y N I K R L L D I K S Y R G 89
10631 CTTTATTATAAATATGATAAACAGATAAGAGAATATATATTAAGAGATTTCAAAAGAATATATCAGCCATATAGTATGCGTTTAATCTTT 10720
90 L R H V H G L P V H G Q R T H S N G K T Q K S L S K R R G I 119
10721 TTAGGAATA 10729
120 K I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13542
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
13543 ATGTCTAAATTCCAAATAATAGCATACGATATAGTAACTAAAATTTATAAAGCTCTTAAGAACACATCAATTACTACCACCGATCCTATT 13632
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
13633 GTGAACACTTTTATTTATAAGAACGAACGTATTAATTTAGAT---AAAGAAGCATGCGAAAAGGCTTTTAAAATAATAACAACGATATTA 13719
31 R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H Y I 60
13720 CAAGAAGATGAAAAAAATTTAATTAAG---AAAAAACAAACCACAACAAAATGGGAAAAAGTAATAAGAAAAGTAATATACGATGCAATT 13806
61 E E N F L I E S E L R K N Q T Y N I K R L L D I K S Y R G L 90
13807 ATGGAAGCACAAAATATAGAA---AAATCATCAATATCGAATTTCAATGGTAAAGAAATCTTTTTTACATTATTAAAAGAAGATCATATA 13893
91 R H V H G L P V H G Q R T H S N G K T Q - K S L S K R R G I 119
13894 AACATGATA 13902
120 K I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13542
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
13543 ATGTCTAAATTCCAAATAATAGCATACGATATAGTAACTAAAATTTATAAAGCTCTTAAGAACACATCAATTACTACCACCGATCCTATT 13632
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
13633 GTGAACACTTTTATTTATAAGAACGAACGTATTAATTTAGAT---AAAGAAGCATGCGAAAAGGCTTTTAAAATAATAACAACGATATTA 13719
31 R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H Y I 60
13720 CAAGAAGATGAAAAAAATTTAATTAAG---AAAAAACAAACCACAACAAAATGGGAAAAAGTAATAAGAAAAGTAATATACGATGCAATT 13806
61 E E N F L I E S E L R K N Q T Y N I K R L L D I K S Y R G L 90
13807 ATGGAAGCACAAAATATAGAA---AAATCATCAATATCGAATTTCAATGGTAAAGAAATCTTTTTTACATTATTAAAAGAAGATCATATA 13893
91 R H V H G L P V H G Q R T H S N G K T Q - K S L S K R R G I 119
13894 AACATGATA 13902
120 K I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15214
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.10
15215 CTTTTTGCAAATTAT---CTTTCAGCAGATTCTACATTACAAAATATGAGCTTTGATTTATTTGAAAAACAAACTAAAGATTTACAGGAT 15301
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
15302 GAACATTTAGCAAGCTTTTTCAATAAAAGTACACCATTAATACAACATAGCTTAAGTTTTGATTATTTATCTAAAATGATACACATAATT 15391
31 R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H Y I 60
15392 AAA---AATTAT---------GCTAAA---AAACCTGGGGAGATATTAAATATTCTTAGTATTTTATATTATAAAGAAAAAAATGCTTTA 15466
61 E E N F L I E S E L R K N Q T Y N I K R L L D I K S Y R G L 90
15467 TATAACAATAGTGAACTTGTTATATTTTTAGATAGTACAATGAGCGGGTCTCAACATTTAGCAACAATATTTAAAAATAAA---TTAGCA 15553
91 R H V H G L P V H G Q R T H S N G K T Q K S L S K R R G I K 120
15554 GCTAAA 15559
121 I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15581
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.04
15582 ATGAAACT-AAATTTGACTTAAATATTAATTGCCTTGAAAAATTT---CAGCTATTTATTACA---AAAGCATTATCTGACGAAACTTCT 15664
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
15665 AAGTATTTAGCTAAATTT---GACATAAACCGTAAT---GATTTATATGCATTGAATTTAGCAGAAATTTCTAATTTACTTTGTAAAAAA 15748
31 R E L C S Y M G L S T K L K L S D L N E S Q I S K - L C H Y 59
15749 ATATTTAATTCTGAAATTACTATTTCATGTTTA---AAGTCATATTTAAAAAAAATGGCTTTTAAATATGAAGTGACTCCTTGT---GCA 15832
60 I E E N F L I E S E L R K N Q T Y N I K R L L D I K S Y R G 89
15833 ATTTCCGATACTTATTCTTTTCCTGATTCTTTTATGCAAGAATGTAAATGTATAATATCAGATAAAGTTTTAATGAAGATATCAAAGAAA 15922
90 L R H V H G L P V H G Q R T H S N G K T Q K S L S K R R G I 119
15923 AAGAAAACT 15931
120 K I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16051
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.18
16052 ATGGCAGATCTTTACGGAATGACAATAGGAGGTAGTCGTAAATCTATTTCAAATGCGCTCATTGAAAAAATAATTGAAAAAGGAAAATTT 16141
1 M I H L F G I N I - D S N K K I P S A L - K T V Y G L G D E 28
16142 GATATA---AACCTT---TCTTATATTCACATATTTTCTGATATATTATCTAAATATTATAAATATTTTTATAAAACTAATTATTTACCT 16225
29 K V R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H 58
16226 TATTGTGATACTTATTTAACATTACGAGAATTTCTAAAGAAAATGGAAGGTCCTTTAACAATGTCAACAGAATTTTTAACATGGTCATAT 16315
59 Y I E E N F L I E S E L R K N Q - T Y N I K R L L D I K S Y 87
16316 AATCCA---AGAAAAATGAAAATATTACGTATAAATGTTGTAAAATATTCAAAAATAACAAATGACCTTAAATCTTTG---AAACGACGT 16399
88 R G L R H V H G L P V H G Q R T H S N G K T Q K S L S K R R 117
16400 ATGATTAACGTAGCA 16414
118 G I K I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45843
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.11
45844 CTAGCCCACCTTTT-AATATGAAAGTGGATGGGCGTTTAATAATCAATGAACTTATCAAAAATGCTAGGCAACTCAAGAATCCTGAAAAA 45932
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
45933 AAATATCTATTTTCTGTATATATTCTTGTTAGCGGT---AAAAGAGCTAACGTGTTACCTTCCGAAGCGAAAATATTAATATCTGATGCC 46019
31 R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H Y I 60
46020 CTGGACGAA---TTAAACGATTCAAAATTGGCTAAGATTGGGGATAAGAAATATACTATACTAAAAAGAGTC---CTTAAACGTTTTGAA 46103
61 E E N F L I E S E L R K - - N Q T Y N I K R L L D I K S Y R 88
46104 AGTATACGTACTCGTTTATCGAAAGTTTTAAACGGCTCCGAATTTTCGGATACCATAGCCAATGACACAGGTCATGTTAAGAAATCTATT 46193
89 G L R H V H G L P V H G Q R T H S N G K T Q K S L S K R R G 118
46194 ATGAATTTAATA 46205
119 I K I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32257
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.04
32258 ACAATTTATTGTGAACCGGTA---ATACAAGCATGGCTATCGTTTCCTTCAGATTTAAGAAAGGCATTCATGAATGATGTACAACAAGCT 32344
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
32345 TCTGATCCATCAACGGTAATCCAAGATCCGCTGTATTTAGACTCGATAAAACAATTGGATATTCATCTATCTACATTCTTGCATAATATG 32434
31 R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H Y I 60
32435 CGCAACCAATTCCGCAATGCGTATACAATCCATAAAAGTAA-TCTAAATCTGTTAAAGG-TTA------ATCTAGAGCTTCAATGGAATA 32516
61 E E N F L I E S E L R K N Q T Y N I K R L L D I K S Y R G L 90
32517 CAACATATGAAGCTGCAATTGCTGCACTCTTTGCCAAAATATGGAAGTTTATTCCGAGCAATATCACTCAATTTACAGACCTCCATTATT 32606
91 R H V H G L P V H G Q R T H S N G K T Q K S L S K R R G I K 120
32607 TTCTTA 32612
121 I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33250
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
33251 GAAAATAAACTCATCAAT---AATTTAAAAGACGACTCTTTAATCACATTGTATAATAAATATTTGATACATTCCCCGGATGAGCGTGCA 33337
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
33338 GAGTATGTCGACATCTATTTACCGTTGAAGGACTTCAAACATAACATTAAAACCTATTTTAATGAAATAAATCATTTATATCATACATCA 33427
31 R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H Y I 60
33428 TATCGCAAATTCAAATTAGCACCGGATTTATACGTTTCTGCAATAAACAATATAAGTCCAATGTTTTATCAACAGTGCTTATCAACCCTT 33517
61 E E N F L I E S E L R K N Q T Y N I K R L L D I K S Y R G L 90
33518 AAACAAACCATG---ATAGAT---CAT---TTACGTTTTACGCAAAATAAACCTACGGATCTAACTTATTATTTTTATCTT---ATCAAA 33595
91 R H V H G L P V H G Q R T H S N G K T Q K S L S K R R G I K 120
33596 CTAATG 33601
121 I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33766
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
33767 TATAGTAACATGACTAATAATAATATAAACACATCCCCTACTACATTAAAT---ATAAATCCGCTTAGCAAGAAGCAAAGTCAAAGAACC 33853
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
33854 TCTCCGAATAAAAAAAGCTTATCACAACCGAAAAGGTATCAACTAGATTCCTTGCATGTAATACAA---AATAAATTGAATCCACAGATA 33940
31 R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H Y I 60
33941 CAAGAGCAACTGCTTGCGTATACTAAAACGAACCACGAGAAGTTACAAGAACTTTATAATCGTCAGGTTATATCTCATGTGCATCCCGAG 34030
61 E E N F L I E S E L R K N Q T Y N I - K R L L D I K S Y R G 89
34031 ACTACACATACAGCCTTATTTCAAACGTATGTCCAAATAACAAGTTATCATGGAAAAACAACAATTCCAAATGCTTGTCAACTAAGT--- 34117
90 L R H V H G L P V H G Q R T H S N G K T Q K S L S K R R G I 119
34118 CGCTTAATT 34126
120 K I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44791
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
44792 ATTTTAAATAAATCGTTAGTAGAGTTTTTAAATCAAGAGAAATCTGAAACTTTGGGATATGCTCTTTTTATATTGTGGACAGCACCTACA 44881
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
44882 TTCGATATTGTAACATATGAAACAATTAAGTTACAGATATCT---TCTGAATTACGGAAAACCATTATTAATTATCTTTTTTGTGTTAAT 44968
31 R E L C S Y M G L S T K L K L S D L N E S Q I S K L - C H Y 59
44969 AATTTAACATTAATTAGTATTGGCTATCCTATTAAACGCGACGCTTTGTACAAAGCGTTTACTATAATACAT---GATTATATTAATAAT 45055
60 I E E N F L I E S E L R K N Q T Y N I K R L L D I K S Y R G 89
45056 ATTAGAGCATATGATAGTTTACCTTCTGAGTTATTTACGCGCAAACTTTTGAAAGGTGCTACAATGAAA---TTAGGTTATTCACAAGGT 45142
90 L R H V H G L P V H - G Q R T H S N G K T Q K S L S K R R G 118
45143 CAAGAGTTTCGG 45154
119 I K I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47640
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
47641 ATAATTCCACAA---AATTGGAATGCAAAAACTCGTCAAGATATGATAACGTATTTGGAC---GTTTATATTTCCGAAGAAGAAGCTCTA 47724
1 M I H L F G I N I D S N K K I P S A L K T V Y G L G D E K V 30
47725 TTTGATAATCCTACTTACATATCTTCTAAGGAAAAGAAAATAAAACTT---GAACTTAATTTGGGA---TTACAGATCCTTAATTGGTTG 47808
31 R E L C S Y M G L S - T K L K L S D L N E S Q I S K L C H Y 59
47809 ATAGATCTAAATATTCTTCAGGAAGAAATAGATAAGCGTAATGTTCCTCATATTACATTTTGGCATCTGCCACTTTATATAAGCCTCATA 47898
60 I E E N F L I E S E L R K N Q T Y N I K R L L D I K S Y R G 89
47899 TTTCGAATCATATCTATCCTTCA-GTTTATAAACAAAAGTGGGTGAACAATTCAAAATTAAGATTCAATTTG---AAAGA-CGGAATATT 47983
90 L R H V H G L P V H G Q R T H S N G K T Q K S L S K R R G I 119
47984 CTAAATGCA 47992
120 K I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59453
Protein: lcl|KC353356.1_cdsid_AGH24280.1 [gene=rps13] [protein=ribosomal protein S13] [protein_id=AGH24280.1] [location=29363..29731] @ 0
DNA length: 732 Protein length: 122
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
59454 AAAATTAAAAAA---AGCATAAACAAAAAAACACCCTAACAAAACATTGGTAAAAAGGCTCTCCAGCTAATGTCATTAATTGGTCCCAAC 59540
1 M I H L F G I N I D S N - K K I - P S A L K T V Y G L G D E 28
59541 GATATCTCGGAGTGCTGCTCTAATCAACAAAATAAAGCTAGGATAAACATTATT---TTAAAGCAAAT-AAAATAAAACCATTTAAAAAG 59626
29 K V R E L C S Y M G L S T K L K L S D L N E S Q I S K L C H 58
59627 GAAATAAGA---AAC---TTGGAACCATCCTCCAAGAAAAAGAATAGTTGTGTAAAC---GACCAAATATTAAATTACATATTCTGCAAT 59707
59 Y I E E N F L I E S E L R K N Q T Y N I K R L L D I K S Y R 88
59708 AAAATAAAAAGC---AAAGGA---CCACTAGAATATTCACAC---TATAACCTGCAACAAGTTCACTTCAGCTTCAGGCAATCAAAAGGA 59788
89 G L R H V H G L P V H G Q R T H S N G K T Q K S L S K R R G 118
59789 GTACGATTAGTT 59800
119 I K I L 122
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6399
Protein: lcl|KC353356.1_cdsid_AGH24281.1 [gene=rps11] [protein=ribosomal protein S11] [protein_id=AGH24281.1] [location=29756..30145] @ 0
DNA length: 774 Protein length: 129
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
6400 ATGATGCGAACTTTAATACTT---AATAAAAAA---ATAAATAGCTTTCTGTATCTTTGTAAGCCGATAGTCATTCAAATATCTAAGCGT 6483
1 M I K E L K K D N K K D I N N L F Y G H V H V K A S F T N T 30
6484 TTTTATCCCACTGATAAAAAAATAGGTCATGCTAAAAAATTGCTTGATCACCGTTCAATGTCTTTTTCT---AAAAGAATTTCGAATCCA 6570
31 I V T I T D I M G N T I S W A S S G S S G F K G A R R S T S 60
6571 CAATGTCGTAAATTGCGTCAACAATGTAAACAGCATCATAATAAATATATTACTGATACAAAAATACAAACTAGACATAGAGGTTTAAGC 6660
61 Y A A Q A A A E N A G K K A V E H G I R S V K L I T R G L G 90
6661 AATAGAGAATTACAAGGTATTCGATCTCCATTGAGTAGTAAA---AAGTTTAAGGAGGTAAATAATATTGAT---ATG---AAAAATCCT 6741
91 P G R L S C T K G L L S A G L K I S L V G D L T P I P H N G 120
6742 TTTCAAAACTCACAAAAAGTGTCAGAA 6768
121 C R A K K K R R V 129
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1017
Protein: lcl|KC353356.1_cdsid_AGH24282.1 [gene=rpoA] [protein=RNA polymerase subunit alpha] [protein_id=AGH24282.1] [location=30222..30899] @ 0
DNA length: 1350 Protein length: 225
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.00
1018 ACTATATTTCAAATATTACCTTGGATATTTTTTTATGAACTTTTTCTAAGAATATCTAAATTTGTAGATGACATTTGGATACCATATGAT 1107
1 M V Y Q T P S F R P K I Q N L K Y D S H S I Q V L I G P L E 30
1108 CAAGCATTACATAATTTGATATATAGTAAAAAATTAAAATATATAAACGAAGAAACATTAATGATAGATGATGAACCACATGATATGTCT 1197
31 K N F S G S F A N I L R K V I Y R F T P G V G I I G L K V N 60
1198 TTTTACCAAGATATAAACGAACATTATATAAAACGAGGTTTTGTTAAAGATCCAAATAATATATAGAATAA-ATGAAAAATATAATAAAT 1286
61 S V D F L H A Y S S L P G I Q E D I P N L F C N L K N L V I 90
1287 AAAATA---CGATATATATATATTATACTA---TTACTTAAATTATTATATAATCCTATAATATTTTTTCTGATATATTATGTAATAATA 1370
91 K I D K Y D Y K P F N L I I K K K G P Y I I K G E D I L C P 120
1371 ATAGGTATACAAATATTA---TGGTCATATTATATG---CATGTAGAAGTTATCAAAGATAATGATAATAATTTATTAAAAACATTGCCT 1454
121 L G V T I L N K N V Y V C T V Q S D C Q I D L T L I G D V G 150
1455 TCAATAAAGATTATTCATAATTATTTTCTGTATAAAAGTAGTTATTTATATGAAGCTGGTTCAATATGTAAATCTTTATATAAAATAATG 1544
151 C G Y V L S N Y F G N K K N T I Y S D T V F C P I K H V S Y 180
1545 CCGACAACTAAATATTCGGTAGTTAAAGATATTATTTTGGTGAAATATAGTTTAGATACTTCAGCTGATTATCAACCTTCTCAAGATGAA 1634
181 Y V R S Y T T Y E E L I L Y - I K T N G T C D P N F V L K N 209
1635 GCCTCATATTTCCCTTCTGATGATATTAAT---GATATGATACCAGTA 1679
210 A F S F L Q D K V H F K F E N V 225
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10054
Protein: lcl|KC353356.1_cdsid_AGH24282.1 [gene=rpoA] [protein=RNA polymerase subunit alpha] [protein_id=AGH24282.1] [location=30222..30899] @ 0
DNA length: 1350 Protein length: 225
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.00
10055 ATATTATCGCAAATTATTTCACTTTGTGTATTAATGTATGTTTTTTACATTTATAACTTAGTTATAAAATACAAATTTTACAAAATTTAT 10144
1 M V Y Q T P S F R P K I Q N L K Y D S H S I Q V L I G P L E 30
10145 TTA---TTTATGTGCCAATTTGAAACTTTTATA---AAAATATGTGACATTTTTACAGGTGGATATCGATTCTATGAACTTTTATACGAT 10228
31 K N F S G S F A N I L R K V I Y R F T P G V G I I G L K V N 60
10229 AACTTACATGATTTTATTTATATTAAACTAAAACCAATTAATAAAATAAACTCTTCTTATTTACAAGTGCTAATGATAATACTATGCAAT 10318
61 S V - D F L H - A Y S S L P G I Q E D - I P N L F C N L K N 87
10319 AAGATCTTGTACATATATGCTTATATAAAAAATATCTTC---TATATTTTACGAGCATTTTTTCCTGAAATTTTATTATTTATAAGTTTG 10405
88 L V I K I D K Y D Y K P F N L I I K K K G P Y I I K G E D I 117
10406 ATATCTGATTTAAATAATAGAGAAATAAAAACATTTTATTATATCTTAGCTATATACCCA---TTAATGACATCTTATAGGACCATTAAA 10492
118 L C P L G V T I L N K N V Y V C T V Q S D C Q I D L T L I G 147
10493 GAAATTCTAGGAGACTATGATATGTTAAATATAAATGATAAATTAACTACATATTTTTATGAAGATAAAATACACGATAAATTGAGAAAA 10582
148 D V G C G Y V L S N Y F G N K K N T I Y S D T V F C P I - K 176
10583 ACAATAAGTGAATATGAACGTACTAGAATATTAATACAAAGTATGACTCTTTATTATAAATATGATAAACAGATAAGA---GAATATATA 10669
177 H V S Y Y V R S Y T T Y E E L I L Y I K T N G T C D P N F V 206
10670 TTAAGAGAT---TTCAAAAGAATATATCAGCCATATAGTATGCGTTTAATCTTTTTA 10723
207 L K N A F S F L Q D K V H F K F E N V 225
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2231
Protein: lcl|KC353356.1_cdsid_AGH24283.1 [gene=rps1] [protein=ribosomal protein S1] [protein_id=AGH24283.1] [location=30928..31503] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.08
2232 GCAACATCCCTAATAGTTGAAGTTTTAAGTAATTTAGAAAATGTGGATTCTAACTGTTATTATGATAATCCTGATATCTTAGATGGGATT 2321
1 M V S N N S Y S K D N F K S I F R N L G F E K S K L E G S F 30
2322 GTCCAAGATATTGTAACACGTTTTACAAAACA-ATGATC---TTATATCAGAAAATTCAACATACTAATTTTTTTACAAATAAA---ATT 2404
31 I E G V V V S K Q K H L V T L Y T G L K T T T Q F L D K E L 60
2405 ---TCTTATAGTAATTTTATCCGTTTTTATCCTGGCAATTTAGGG---AAAACACAACCAAAATCTATTAAA---GAAATGCCTGAGAGT 2485
61 K S F L N K N Q E L T D S I G Q K T Q L Y I H N I E N P D G 90
2486 AAAACACCTCAAGAAATTACAAAATATTTTCCATCAGGTACAACATTACAAGATCTTGAAGAAGTTGCACAAGATGTAATGTATCCCAAA 2575
91 E T V F N L N S Y H Q Q T K A L I A W D R V - H R L K Y V K 119
2576 GAAATGTCTAGTATTCCTACTGAAAAAAGTGAAGAA---CCAATTAAATCTGCAGCAGTTAAAGAAGAAGAAAAAAAAATAATAGAAAAA 2662
120 G I V L N T V N G G F S I G I G G V V A F L P K S R A K L P 149
2663 CTTATAGAAGCTGATACTATAGCGGAAAAAATACAAGGTAATTCTCATATTTTTAATCCATTAAGATTAGTTTATAACACCAGTAGTAAA 2752
150 L T G K K E Y L L S L M N N Y H V Y K I I K V N H D R R N I 179
2753 GTATGGAATTACCTAAAAAAAAATGTTGAATTTAAA 2788
180 I V S L V N S P I Q K K 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2611
Protein: lcl|KC353356.1_cdsid_AGH24283.1 [gene=rps1] [protein=ribosomal protein S1] [protein_id=AGH24283.1] [location=30928..31503] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
2612 CCAATTAAATCTGCAGCAGTT---AAAGAAGAAGAAAAAAAAATAATAGAAAAACTT---ATAGAAGCTGATACTATAGCGGAAAAA--- 2692
1 M V S N N S Y S K D N F K S I F R N L G F E K S K L E G S F 30
2693 ATACAAGGTAATTCT---CATATTTTTAATCCATTAAGATTAGTTTATAACACCAGTAGTAAAGTATGGAATTACCTAAAAAAAAATGTT 2779
31 I E G V V V S K Q K H L V T L Y T G L K T T T Q F L D K E L 60
2780 GAATTTAAATTCCATAAA---CCTGAG---TCTGATAATTATACAGTGCCTATTACAGCC---GTTTATGATACAAAACAAGGATCATCC 2860
61 K S F L N K N Q E L T D S I G Q K T Q L Y I H N I E N P D G 90
2861 GATATTCAATATAATTTAGAAAAAATAATTAAAGATTTGAAAATAGCTATACAGGAAAAATCTTTGAATAAA---GAACAAGTAAAAAGC 2947
91 E T V F N L N S Y H Q Q T K A L I A W D R V H R L K Y V K G 120
2948 ATTATT---GATGATATTCGTAAAAATTAT---GTT---ACTAAAGGGGTTAGTATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAG 3028
121 I V L N T V N G G F S I G I G G V V A F L P K S R A K L P L 150
3029 TCTTATGATTTTCAATATGAA---CCTTTAAAACAAATTTGTAAAATTAAAAAAGATATTATTATAAATAAAGAACAAGAAAAAATTGTT 3115
151 T G K K E Y L L S L M N N Y H V Y K I I K V N H D R R N I I 180
3116 ATAGAT---TCTAAATCATCTTATGAAGAAAAA 3145
181 V S L V N S P I Q K K 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3199
Protein: lcl|KC353356.1_cdsid_AGH24283.1 [gene=rps1] [protein=ribosomal protein S1] [protein_id=AGH24283.1] [location=30928..31503] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.01
3200 CTTGAAAAAAATAAAGATTATACTAAAGAATTTCTTGAAGCAAAAGAATTACAAGAATGGTATGATTATTTTCAGAATAGAGGAGCA--- 3286
1 M V S N N S Y S K D N F K S I F R N L G F E K S K L E G S F 30
3287 TTAAAAAAATTA------TCAAAACAAGAAAAAGAAGTTTATGATAAATTA---TTAGAAATAAAAAATAAATATTTACCTAGCGAA--- 3364
31 I E G V V V S K Q K H L V T L Y T G L K T T T Q F L D K E L 60
3365 AAAGATTTTCAAGAAAAAAATAGTAGTTATTTGACACCTCTGAAAAAAAATAGTGCTTTACCTATT---AATTTACAAAATGAAAAATCA 3451
61 K S F L N K N Q E L T D S I G Q K T Q L Y I H N I E N P D G 90
3452 GCTAAATGTTACTTGCCAAAAGATTATGTTATGGAAATAACAAAT---ATAGAA---CGTGCTCTTGAAATTTTAAATAAATCACAAACA 3535
91 E T V F N L N S Y H Q Q T K A L I A W D R V H R L K Y V K G 120
3536 TTATCTATTAATGATCTTAAATTG---TTATCCATTAAT---TCTTCGGCAGTTACTATAGATACAGAAGGTGTTATTAAAATATCACAA 3619
121 I V L N T V N G G F S I G I G G V V A F L P K S R A K L P L 150
3620 GAGGCGTATCAGTCTTTTACT---AAATATAAAGATAGCTT-AGGATTTAAATATTTATTAGAATATCCAAAAACAGAAGAAATATTATT 3705
151 T G K K E Y L L S L M N N Y H V Y K I I K V N H D R R N I I 180
3706 ---ACGTATAAAAGAAAGGAATTTTTTTATTGC 3735
181 V S L V N S P I Q K K 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3892
Protein: lcl|KC353356.1_cdsid_AGH24283.1 [gene=rps1] [protein=ribosomal protein S1] [protein_id=AGH24283.1] [location=30928..31503] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.01
3893 CAAGTTACTAATGAGGATTCTAATAAACAAAATAAAGATCAAATGTTTCGT---ATT---TTTCCTACTTTTTTAATTGTAGATGAGAAA 3976
1 M V S N N S Y S K D N F K S I F R N L G F E K S K L E G S F 30
3977 ATTGAGCCCTTAATAGTAAATCTTGAAATGACGTTGTAT---TTTTAT---GGCAAAAATACAGATAATAAAAGTATTGTAGAAGAAATC 4060
31 I E G V V V S K Q K H L V T L Y T G L K T T T Q F L D K E L 60
4061 ATA---TTT---ACGCAA---TATGATTTAACAAAAAATATATGGTCCGAAAATTAT---TACCAATATCCTTTT---AATGTGGATCAA 4135
61 K S F L N K N Q E L T D S I G Q K T Q L Y I H N I E N P D G 90
4136 GAATTTTTACGTCAACTTTCTATTATTTTTTATAGTAATAAATTACAAGAACTTCAACAGGATTATAAAGAACTACAAGATAAATTATAT 4225
91 E T V F N L N S Y H Q Q T K A L I A W D R V H R L K Y V K G 120
4226 TCACTTCTTATTAAAAGTCACGAAGACTATAATAAGGAAATAGATCGCCTTAATGAA---TTA---AAAACAAATTAT---TTGAAAGAT 4306
121 I V L N T V N G G F S I G I G G V V A F L P K S R A K L P L 150
4307 AGAAAATATAAACAATATTTTAATTCATTAACAGATGAAGAACAAAAATTAGTTTCTCATATAAAAATTTTTCAAGATAAGATTAAAGAT 4396
151 T G K K E Y L L S L M N - N Y H V Y K I I K V N H D R R N I 179
4397 GAT---AATATACAAAATGAAAAAAAACAAAAGAAA 4429
180 I V S L V N S P I Q K K 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15001
Protein: lcl|KC353356.1_cdsid_AGH24283.1 [gene=rps1] [protein=ribosomal protein S1] [protein_id=AGH24283.1] [location=30928..31503] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.08
15002 AAATTTTATAATGCTCATTTTATAAAAGATGCCATA------ATTTATCAACATTTTGAATATTTTTATCTTCCAATAGAAATAAGCGGT 15085
1 M V S N N S Y S K D N F K S I F R N L G F E K S K L E G S F 30
15086 GTT---GGTCGCATACTAACAGTGTCA---CATATTTTAAGTTTTCAAACTAAC---AAGTTTGCAAGACCATTTCTTAATTATTTCATA 15166
31 I E G V V V S K Q K H L V T L Y T G L K T T T Q F L D K E L 60
15167 AAAAATAAAATTACTATGGATTTCGAAATATATGATAAAATGAAAGCACTTTTTGCAAATTATCTT---TCAGCAGATTCTACATTACAA 15253
61 K S F L N K N Q E L T D S I G Q K T Q L Y I H N I E N P D G 90
15254 AATATGAGCTTTGATTTA------TTTGAAAAACAAACTAAAGATTTACAGGAT---GAACATTTAGCAAGCTTT---TTCAATAAAAGT 15331
91 E T V F N L N S Y H Q Q T K A L I A W D R V H R L K Y V K G 120
15332 ACACCATTAATACAACATAGCTTAAGTTTTGATTAT---TTATCTAAAATGATACACATAATT---AAAAATTATGCTAAAAAACCT--- 15412
121 I V L N T V N G G F S I G I G G V V A F L P K S R A K L P L 150
15413 ---GGGGAGATATTAAATATTCTTAGTATTTTA------TATTATAAAGAAAAAAATGCTTTATATAACAATAGTGAACTTGTTATATTT 15493
151 T G K K E Y L L S L M N N Y H V Y K I I K V N H D R R N I I 180
15494 TTAGATAGTACAATGAGCGGGTCTCAACATTTA 15526
181 V S L V N S P I Q K K 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33190
Protein: lcl|KC353356.1_cdsid_AGH24283.1 [gene=rps1] [protein=ribosomal protein S1] [protein_id=AGH24283.1] [location=30928..31503] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.12
33191 TTGTACTTTAATCGTCTAATTCTCTTAATAGATTTAGAGCCTATCTTAATGAAT---GGTTTTCGTTTATCAAAACTTAATATACTGACT 33277
1 M V S N N S Y S K D N F K S I F R N L G F E K S K L E - G S 29
33278 CCCATAGCAGAGTATTATAATACTATGTTTTCCAATGCAGTATTAAAGGAAACAGAAAATAAACTCATCAATAATTTAAAAGACGACTCT 33367
30 F I E G V V V S K Q K H L V T L Y T G L K T T T Q F L D K E 59
33368 TTAATCACATTGTATAATAAA---TAT---TTGATACATTCCCCGGATGAGCGTGCAGAG---TATGTC---GACATCTATTTACCGTTG 33445
60 L K S F L N K N Q E L T D S I G Q K T Q L Y I H N I E N P D 89
33446 AAGGACTTCAAACATAACATTAAAACCTATTTTAATGAAATAAATCATTTATATCAT---ACATCATATCGCAAATTCAAATTAGCACCG 33532
90 G E T V F N L N S Y H Q Q T K A L I A W D R V H R L K Y V K 119
33533 GATTTATACGTTTCTGCAATAAACAATATAAGTCCAATGTTTTATCAACAGTGCTTATCAACCCTTAAACAAACCATGATAGAT---CAT 33619
120 G I V L N T V N G G F S I G I G G V V A F L P K S R A K L P 149
33620 TTACGTTTTACGCAAAATAAACCTACGGATCTAACTTATTATTTTTATCTTATCAAACTAATGTTTTTTCCAGAAGAATCAGATAGTTAT 33709
150 L T G K K E Y L L S L M N N Y H V Y K I I K V N H D R R N I 179
33710 AAAGTACCGTTATTTACCTCTGAA---CAAAAGAAG 33742
180 I V S L V N S P I Q K K 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 399
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.13
400 AAAGAAAAAATGATAAATATATGTATCATAACGTTATATATATTTACTTTTGTTATAGGTATA---TTTTATCTTAGATATATAAATATA 486
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
487 ACAAAAAAAGTAGACTTAAAAATTTATTATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAA---GAAGAAATTATTTTAAAT--- 570
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
571 GTGGTAATAATAATAACTTTTATAATAATTTATATTTTTATAATATATAAATTTACTCAATATTTTAAATTACAAGTAATTAAAAGACAT 660
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
661 CTTTACTTAATAGGAATACCATTAAATAATAATTGGTATTCAACC------GTTCATCGAAAGTATTTATGGCCTTTAGCAAATTCTTTT 744
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
745 CTTAAAATAAGTATAAAACATAAAATTGAGTTATTGTAT 783
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 399
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.13
400 AAAGAAAAAATGATAAATATATGTATCATAACGTTATATATATTTACTTTTGTTATAGGTATA---TTTTATCTTAGATATATAAATATA 486
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
487 ACAAAAAAAGTAGACTTAAAAATTTATTATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAA---GAAGAAATTATTTTAAAT--- 570
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
571 GTGGTAATAATAATAACTTTTATAATAATTTATATTTTTATAATATATAAATTTACTCAATATTTTAAATTACAAGTAATTAAAAGACAT 660
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
661 CTTTACTTAATAGGAATACCATTAAATAATAATTGGTATTCAACC------GTTCATCGAAAGTATTTATGGCCTTTAGCAAATTCTTTT 744
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
745 CTTAAAATAAGTATAAAACATAAAATTGAGTTATTGTAT 783
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1289
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 31 Length-adjusted: 0.23
1290 ATACGATATATATATATTATACTATTACTTAAATTATTATATAATCCTATAATATTTTTTCTGATATATTATGTAATAATAATAGGTATA 1379
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
1380 CAAATATTATGGTCATATTATATGCATGTAGAAGTTATCAAAGATAATGATAATAATTTATTAAAAACATTGCCTTCAATAAAGATTATT 1469
31 - V L P T V V T I F K L R K K K L E A M V N D I E T L K K E 59
1470 CATAATTATTTTCTGTATAAA---AGTAGTTATTTATATGAAGCTGGTTCAATATGTAAATCTTTATATAAAATAATGCCGACAACTAAA 1556
60 E S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S 89
1557 TATTCGGTAGTTAAAGATATTATTTTG---GTG---AAATATAGTTTA---GATACTTCAGCTGATTATCAACCTTCT---CAAGAT--- 1631
90 N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I 119
1632 GAAGCCTCATATTTCCCTTCTGATGATATTAATGATATGATA 1673
120 N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1853
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
1854 GAACCTGTTGAGGAGCCTATTGAAATAAAAGTAGAATTTTTTAATGCTTATACGGATCTTATGAATATAGAAGAT---GTAGATAGTGTA 1940
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
1941 ATTTCTCCAAGTTTTGAAGGCTCTCGTATTTATAGTGACGATGCAATTTTTCAGTTACATTTAGATATTACTGAATTTGTTACACAAAAA 2030
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
2031 ATAAGGGTTTCAACAGAAGATATATCTGTAACAATTATACGA---AATACAGTCCATGAATATTTTATAAAAAGTAATTTAAATAGTAAT 2117
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
2118 CTTACACCGTCTGAT---TTGCAAAACACTAATCATTTAATTAATTTATTACTTAAGGAACTAATTGTCAATAGTTTTTTTGCCGCTGAC 2204
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
2205 AACGAAAGTTTTATAATGAAACAAATTGCAACATCCCTA 2243
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2333
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
2334 GTAACACGTTTTACAAAACAATGATCTTATATCAGAAAATTCAACATACTAATTTTTTTACAAATAAAATTTCTTATAGTAATTTTATCC 2423
1 M P Q L D K V T F F S Q Y F W L L I F F - L T F Y F F V L K 29
2424 GTTTT-TATCCTGGCAATTTAGGGAAAACACAACCAAAATCTATTAAAGAAATGCCTGAGAGTAAAACACCTCAAGAAATTACAAAATAT 2512
30 I V L P T V V T I F K L R K - K K L E A M V N D I E T L K K 58
2513 TTTCCATCAGGTACAACATTACAAGATCTTGAAGAAGTTGCACAAGATGTAATGTATCCC---AAAGAAATGTCTAGTATTCCTACTGAA 2599
59 E E S - S I L A N Y D S V L I D S F A S S K E I F N S A V V 87
2600 AAAAGTGAAGAACCAATTAAATCTGCAGCAGTTAAAGAAGAAGAAAAAAAAATAATAGAAAAACTTATAGAAGCTGATACTATAGCGGAA 2689
88 K S N K W I D D S A R N I N K T S L L D V N K K Y L N A I N 117
2690 AAAATACAAGGTAATTCTCATATTTTTAATCCATTAAGA---TTAGTT 2734
118 D I N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2674
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.05
2675 GATACTATAGCGGAAAAAATACAAGGTAATTCTCATATTTTTAATCCATTAAGATTAGTTTATAACACCAGTAGTAAAGTATGGAATTAC 2764
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
2765 CTAAAAAAAAATGTTGAATTTAAATTCCATAAACCTGAGTCTGATAATTATACAGTGCCTATTACAGCCGTTTATGATACAAAACAAGGA 2854
31 V L P T V V T I F - K L R K K K L E A M V N D I E T L K K E 59
2855 TCATCCGATATTCAATATAATTTAGAAAAAATAATTAAAGATTTGAAAATAGCTATACAGGAAAAATCTTTGAATAAAGAACAAGTAAAA 2944
60 E S S I L A N Y D S V L I D - S F A S S K E I F N S A V V K 88
2945 AGCATT------ATTGATGATATTCGTAAAAATTATGTTACTAAAGGGGTTAGTATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAG 3028
89 S N K W I D D S A R N - I N K T S L L D V N K K Y L N A I N 117
3029 TCTTATGATTTTCAATATGAACCTTTAAAACAAATTTGTAAAATTAAA 3076
118 D I N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2914
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
2915 GAAAAATCTTTGAATAAAGA-ACAAGTAAAAAGCATTATTGATG-ATATTCGTAAAAATTATGTTACTAAAGGGGTTAGTATAGAGAATG 3002
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
3003 CTAATG---AA-CTTTTAACTCTTTGGAAGTCTTATGATTTTCAATATGAACCTTTA---AAACAAATTTGTAAAATTAAAAAAGAT--- 3082
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
3083 ATTATTATAAATAAAGAACAAGAAAAAATTGTTATAGATTCTAAATCATCTTATGAAGAAAAATTGAAAAATTTAGAAGAAAAAATGTCA 3172
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
3173 ATAGCTCTTAAAAATATAAATAATTTTCTTGAAAAAAATAAA------GATTATACTAAAGAATTTCTTGAAGCA---AAAGAATTACAA 3253
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
3254 GAATGGTATGATTATTTTCAGAATAGAGGAGCATTAAAA 3292
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3946
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.09
3947 TTTCCTACTTTTTTAATTGTAGATGAGAAAATTGAGCCCTTA---ATAGTAAATCTTGAAATGACGTTGTATTTTTATGGCAAAAATACA 4033
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
4034 GATAATAAAAGTATTGTAGAAGAAATCATATTTACGCAATATGATTTAACAAAAAATATATGGTCC---GAAAATTATTACCAATATCCT 4120
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
4121 TTTAATGTGGATCAAGAATTTTTACGTCAACTTTCTATTATTTTTTATAGTAATAAA---TTA---CAAGAA---CTTCAACAGGATTAT 4201
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
4202 AAAGAACTACAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAAGACTATAATAAGGAA---ATAGATCGCCTTAATGAATTAAAA 4288
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
4289 ACAAATTATTTGAAAGATAGAAAATATAAACAATATTTT 4327
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4025
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.13
4026 AAAATACAGATAATAAAAGTATTGTAGAAGAAATCATATTTACGCAATATGATTTAACAAAAAATATATGGTCCGAAAATTATTACCAAT 4115
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
4116 ATCCTTTTAATGTGGATCAAGAA-TTT---TTACGTCAACTTTCTATTATTTTTTATAGTAATAAATTACAAGAACTTCAACAGGATTAT 4201
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
4202 AAAGAACTACAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAAGACTATAATAAGGAAATAGATCGCCTTAATGAATTAAAAACA 4291
61 S S I L A N Y D S V L I D S F A S - S K E I F N S A V V K S 89
4292 AAT---TATTTGAAAGATAGAAAATATAAACAATATTTTAATTCATTAACAGATGAAGAACAAAAATTAGTTTCTCATATAAAA---ATT 4375
90 N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I 119
4376 TTTCAAGATAAGATTAAAGATGATAATATACAAAATGAAAAA 4417
120 N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4667
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.20
4668 ATTAGAGAACTACCTGATTCTTTATTAACAGAATATCGCTTTTGGATTTTAATTTATATTTGTTGCATATATATATATAGTATTAAAAAT 4757
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
4758 ATTCTGAAGGCTTCAGGAGATAACTATCTTAATTTAAAAGATATTATAGAGATATTGTATGCACCTTTGAAAACTATA------GATCAT 4841
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
4842 GCTATTAAATATAATAAATATATTAAACCTTATTATTACAAATTTGTGAGT---AAA---TTTTATAACTTTACTGAAACAAAA---AAT 4922
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
4923 ATA---AATGATGACCAGATACAA---GTATTT---GTCTTTTTTATGCAGATATTTCCTAGAATTATC---TTAGTTTCTATTTTAATG 5000
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
5001 ATAGATACATTTTATTTTAATAAATTAGAAATATTTTAT 5039
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4967
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.14
4968 TTTCCTAGAATTATCTTAGTTTCTATTTTAATGATAGATACATTTTATTTTAATAAATTAGAAATATTTTATAAATTTGTATTATTGGGC 5057
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
5058 TTATTTCCTTTTATTTTTAGATATTTTAAATATTCTTTAAAAGATGTTTATGAACACTGGATT---GTAGAA---TTGGAAAATAAATAT 5141
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
5142 TCG---TTAGTAAGAATTTATGAA---GTTGGATAT---AAATTTGATGATTCTCGTAAAAAA---AATACAAAAGCTATTTATCATGAT 5219
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
5220 GAA------GAAAAAACAATACGGGAATATATAGAAATTAAATTTAATAATATTATAGAT---TATTTA------CTTGATGAAGTTGAT 5294
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
5295 TATGAGTATGAATCAACTCCTTATTGTAAAAGTGAAGTC 5333
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5241
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.18
5242 ATATAGAAATTAAATTTAATAATATTATAGATTATTTACTTGATGAAGTTGATTATGAGTATGAAT---CAACTCCTTATTGTAAAAGTG 5328
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
5329 AAGTCTATAATGAATATTGTTTAAATAAATATAAAAATAAAAAAGCTCTTTATACAAGTGAA-GATTTAGATATTTTGAGAGCCTTATAT 5417
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
5418 TGTGAGCTTATGCCAAATATT------ATTCATTTAAAAATGTTTTTATCTAGGATAGAAGTTGTATCGGAAGTATCCTTAATGAAAACG 5501
61 S S I L A N Y D S V L I D S F A S S K E I F N S - A V V K S 89
5502 TCAAAAATAGTAATATTTGGGGGGTATTTAGTATGTTGGGCTTATATATTAATTATAAGTTAT---TATAATTATCCTATAGATTTAATT 5588
90 N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I 119
5589 ATGAGTAAATATCTTTTATTAAATTTTATGTTATATTTGGTG 5630
120 N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5746
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.14
5747 GTCAAAAGAATAATAAAAATA---ATAATGCAAATGATAATAATAATTTTAATAAATATATGTAAAATTATTACTTTCAAAGTAAAAGCA 5833
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
5834 GATGAAAAAAATCATCAGGAAGTCTTTGAAAATTTTAGAAAAATACTTAAAGAAGGTTTGTTTAATATATTAGAAAAGTTGGATTGTCTT 5923
31 V L P T V V T I F K - L R K K K L E A M V N D I E T L K - K 58
5924 GAAGATTCACAAACAATGAAGGAAATAGTAGAAACATTTATGGATAATTTAATGCTG---GAAGAATTATATATTAAATACCTTGCAAAA 6010
59 E E S S I L A N Y D S V L I D S F A S S K E I F N S A V V K 88
6011 GATGAAAAAGATTATGAAGGTTTTATGAAAGAAATT---CAA---TCATTATTA---------AAGGATTATCTTCTAAGACTTCAAGAA 6085
89 S N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D 118
6086 ATGAAAAAATTCAAAGAAAATATGAATAAATTCACCTTACGAATC 6130
119 I N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6067
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.08
6068 CTTCTAAGACTTCAAGAAATGAAAAAATTCAAAGAAAATATGAATAAATTCACCTTACGAATCACTGCAATATATGTAATTAGTAGTATT 6157
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
6158 TTGTTACCTCATTTA---CCTATAACGTCATTATTTTTAAACAGCATATATATATATCTATTTGCTAACAAATATTTAAAAGAATTTGAA 6244
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K - E 59
6245 GAACAAAGTTCGGATAAGAATTTTGAA---GTAATTTT----TCCTTT---AATTTTGAATTATATTTTAACAAC---ATTTTA---TG- 6317
60 E S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S 89
6318 ATGAAATACAAAAAAAACAAAAGAAAGATGATTAATAAGAAAACACAAATTCAAAAAAATAATTATTTAATAACGAGTAAGTATGATGCG 6407
90 N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I 119
6408 AACTTTAA-TACTTA---ATAAA-AAAATAAATAGCTTTCTG 6444
120 N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8039
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.17
8040 ATACCT---TTTGAT---TTAACATTATTA---CGTTTAATAATGTTAATTATAATATGTAGTAGTTATATATATATAATTTATAGGCTT 8120
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
8121 ATTAAACCTAAAGTACCACCTCAATTTATACTTAATGTTTTGGTATCTATTATAAATACTGTAAAATCTTTTGACAATTATACGAAACAA 8210
31 V L P T V V T I F K L R - K K K L E A M V N D I E T L K K E 59
8211 TTTAATCTTATTTCCAATACCTATATAAAAATATTTACC---TATATAGCAAATAAAATTAATTATTATAATGTCATTTTATGGGAAAAA 8297
60 E S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S 89
8298 ATCTTACTTATTATAAATACTGTACCGCATATCATTTTACTTTCTGCTCTATTCATAGATACTTTTTATTTAGGTAAATTATTTTATTTT 8387
90 N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I 119
8388 TATAAA---GTCATTTGGGTTACATTATTCTTTTTCTTAATC 8426
120 N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9733
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.17
9734 CTTATAATGTTTAACAAATTATTTTTCATATTACAGATATTAATAAAATTTAAATATTATTTCATGATA---TTTATTGTTTTAACACTA 9820
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
9821 AGTTTATGTTTTGCAATTATTATACATTATAATTATAATAAAAATAAAAAACTACTAATTAATAAAAAACAAGAGCTTTCTAAACTATTA 9910
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
9911 GATTATTTATATATCAAAGATATAAAAATGGAAATATTAGATTTATTTTTATTAAAC------TTATTTACAATAGGATTGATTTTTTCC 9994
61 S S I - L A N Y D S V L I D S F A S S K E I F N S A V V K S 89
9995 TTAAGAAATCTTAATATTGGAGCA---ACCATAAAT---ATTTTCTTATTTCGACCAAGTCTTGTAATATTATCGCAAATTATTTCACTT 10078
90 N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I 119
10079 TGTGTATTAATGTATGTTTTTTAC---ATTTATAACTTAGTT 10117
120 N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10193
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.05
10194 CAGGTGGATATCGATTCTATGAACTTTTATACGATAACTTACATGATTTTATTTATATT-AAACTAAAACCAATTAATAAAATAAACTCT 10282
1 M P Q L D K V T F F S - Q Y F W L L I F F L T F Y F F V L K 29
10283 TCTTATTTACAAGTGCTAATGATAATACTATGCAATAAGATCTTGTACATATATGCTTATATAAAAAATATCTTCTATATTTTACGAGCA 10372
30 I V L P T V V T I F K L R K K K L E A M V N D I E T L K K E 59
10373 TTTTTTCCTGAAATTTTATTATTTATAAGT---TTGATATCTGATTTA---AATAATAGAGAAATAAAAACATTTTATTATATCTTAGCT 10456
60 E S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S 89
10457 ATATACCCATTAATGACATCTTATAGGACCATT---AAAGAAATTCTAGGAGACTATGAT------ATGTTAAAT---ATAAATGATAAA 10534
90 N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I 119
10535 TTAACTACATATTTTTATGAAGATAAAATACACGATAAATTG 10576
120 N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10789
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.07
10790 ATACCTTTATTATTAAGTTTTATATTATATGAGCATAGTTATCAATATTTAGTGAATTTT---AGA---TATTTATGGATAATAAAAATA 10873
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
10874 TTATATTATACTAATTTA---ATATTGGTAATATATATATTTATAATAATATATTTGTCAAGGAATACATTATATTTTATAACCGATAAT 10960
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
10961 ATACATATATTC---AATTTTGAACTTATTCAAGAATTTAGCCAAAAAGAAAAATACGACTTTTTCATAAAA---TATTTAAATTATACC 11044
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
11045 CTGTATATGGAACGAGAATTTCATTCTATACGTACATCAACCTTTTTAAATACAATAATGTCTGATAAAAACTATTATGAAAATTTATTA 11134
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
11135 TTATCC---CTAGATATTAATACAATTAAAGTATTGGCA 11170
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10942
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 31 Length-adjusted: 0.23
10943 TATTTTATAACCGATAATATACATATATTCAATTTTGAACTTATTCAAGAATTTAGCCAAAAAGAAAAATACGACTTTTTCATAAAATAT 11032
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
11033 TTAAATTATACCCTGTATATGGAACGAGAATTTCATTCTATACGTACATCAACCTTTTTAAATACAATAATGTCTGATAAAAACTATTAT 11122
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
11123 GAAAATTTATTATTATCCCTAGATATTAATACAATTAAAGTATTGGCA------AAAGAATTACTTACAATTGCTATTATAGTAGAAGAT 11206
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
11207 CGTTTTATAGAATTAGATGAAAAGCTAATGATTGAAACTATATCAGAATTGATAGAAGAACTCAGACAAGAGGAATTACAAAGAATTATA 11296
91 K W I D - D S A R N I N K T S - L L - D V N K K Y L N A I N 117
11297 GATAAAAATCCAATTACTAAAATATATAACAAAATAGGAGAATTCTTA 11344
118 D I N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12195
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.04
12196 ATGTTTCGTTTGTTATATATTCATTTACATTTTGATGCCTTTGGCAAATATTTACATATTTTATTATTAAGTATAGTTATTATTTATGAG 12285
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
12286 ATAATTCATACTAATATG---TATTATACTTATTATATGCTTTTTATTACTTACATAATTAATGTAATATATAAATATTATATTTTTGAG 12372
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
12373 AAAAAAAAAGATTTTATGTTTGATGGCTTGCTTAATAAAAATTTTTATAATGTACAATATTTTATATTTGCTAATAACAAAAGTACTTTA 12462
61 S S I L A N Y D S V L I D S F A S S K E - I F - N S A V V K 88
12463 AACATGAAAACCAATATAGATTATTTATATTTTATGGAAAAATTAAAAGAAGAAACTACTATTAAATATATTTTAAATGATTTTGAACAA 12552
89 S N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D 118
12553 GTACCAGAAGAG---TTAGTCAATAAACAAATAAATCAAATGTAC 12594
119 I N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12570
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
12571 AATAAACAAATAAATCAAATG---TACTTACGTTTTAGTATAATACTAATATTACTTTTTATGACAATTTTTCTTTATGATGTT---ATT 12654
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
12655 AGATATTCTATAATAATAAAAATACTTAATTACAATATATATTCTTTTTTTATTCTATTGCCATTAATTTTTATATTATATTCAGCA--- 12741
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
12742 ACTAAAATTTTTACTTTGTCTAATACAGCTGAAATTGATGATTTT---ACA---GAATATGTCTTTAATAAAAAATTC---AATATTATT 12822
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
12823 TCTTGGATTTTAATATCAATTCATTATTTATATTT-TTAATAATATTACAACCAAAATTTATTTTTATGGAAACCGAAATTTTATTTAAT 12911
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
12912 CTACCATAT---AGTATAGTAACTATAACTCAAATATAT 12947
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13090
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.12
13091 CTTAAAGATTTA---AAAATTTATGTATATAT-GTTTATAGAAAATTATGTCTATTTAGAACTTTGTATCAATATTTTTATAACAAAATA 13176
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
13177 ATAACAGAA---GTTGTACAAGAATTTTCTTTATTGCATCAGTTATATTATTTTATGCGAAATAGTATTGTAATATTAAGTGTTATCCAA 13263
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
13264 ACTGTAGTATCTTTTGTACAAAAGATTAATTTTATCCTTAAAATTAATCAAGTAGAAGGTATTTATCTTACTGTAAAAATTATTTATGAA 13353
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
13354 AAAGGTTTGCTTAATAAGATGACTGAAACACAATTAAAAACATTATTAGATATC---------AT-TTGGAAAAA---AAT------AAC 13424
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
13425 AAGGAAATGATCTTATATCAAAAAATAAAA---ATCATA 13460
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13533
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.06
13534 AAAATAACCATGTCTAAATTCCAAATAATAGCA---TACGATATAGTAACTAAAATTTATAAAGCTCTTAAGAACACATCAATTACTACC 13620
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
13621 ACCGATCCT---ATTGTGAACACTTTTATTTATAAGAACGAACGTATTAATTTAGATAAAGAAGCATGCGAAAAGGCTTTTAAAATAATA 13707
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
13708 ACAACGATATTACAAGAAGATGAAAAAAATTTAATTAAGAAAAAACAAACCACAACAAAA---TGGGAAAAAGTAATAAGAAAAGTAATA 13794
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
13795 TACGATGCAATTATGGAAGCACAAAATATAGAAAAATCATCAATATCGAATTTCAATGGTAAAGAAATC---TTTTTTACATTATTAAAA 13881
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
13882 GAAGATCATATA------AACATGATAAATACAATAATA 13914
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13623
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.08
13624 GATCCTATTGTGAACACTTTTATTTATAAGAACGAACGTATTAATTTAGATAAAGAAGCATGCGAAAAGGCTTTTAAAATAATAACAACG 13713
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
13714 ATATTACAAGAAGATGAAAAAAATTTAATTAAGAAAAAACAAACCACAACAAAATGGGAAAAAGTAATAAGAAAAGTAATATACGATGCA 13803
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
13804 ATTATGGAAGCACAAAATATAGAAAAATCATCAATATCGAATTTC---AATGGTAAAGAAATCTTT---TT-TACATTATTAAAAGAAGA 13886
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
13887 TCATATAAACATGATAAATACAATAATACAAAGAAATATTGCTTA---TCTTTGATGGAAAGAGTATGGACAACATTTCAAGATAAAAAT 13973
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
13974 ATTACTAGTATTCAATTCCTGAAAACA---TCGTATGTG 14009
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14773
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
14774 AAACTAATTCTTACAAAAAAACAATATTTATCTAAATATTCAAAACTAATGGAAAAGGGTTTAGAAAATAAACTCCATAAAAAAACTAGT 14863
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
14864 AGTATTCATACTCTTGATCAATACATTCAACATGATTTGAATAAAAATGAACAGAGTACTAAAGACTTAGCTATTTTAGCTAAAGAGATA 14953
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E - 59
14954 AATGCTGCTAAACTACTTTTAAATTGCTATTATAAAGTAGTTGCTCAAAAATTTTATAATGCTCATTTTATAAAAGATGCCATAATTTAT 15043
60 E S S - I L A N - Y D S V L I D S F A S S K E I F N S A V V 87
15044 CAACATTTTGAATATTTTTATCTTCCAATAGAAATAAGCGGTGTTGGTCGCATACTAACAGTGTCACATATTTTAAGTTTTCAAACTAAC 15133
88 K S N K W I D D S A R N I N K T S L L D V N K K Y L N A I N 117
15134 AAGTTTGCAAGACCATTTCTTAATTATTTC---ATAAAAAATAAAATT 15178
118 D I N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15292
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.12
15293 TTACAGGATGAACATTTAGCAAGCTTTTTCAATAAAAGTACACCATTAATACAACATAGCTTAAGTTTTGATTATTTATCT---AAAATG 15379
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
15380 ATA---CAC---ATAATTAAAAATTATGCTAAAAAACCTGGGGAGATATTAAATATTCTTAGT---ATT---TTATATTATAAAGAAAAA 15457
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
15458 AATGCTTTATATAACAATAGTGAACTTGTTATATTTTTAGATAGTACAATGAGCGGGTCTCAACATTTAGCAACA---ATATTTAAAAAT 15544
61 S S I L A N Y D S V L - I D S F A S S K E I F N S A V V K S 89
15545 AAATTAGCAGCTAAAAATAGTTGTTTAATTTCTACAGATGAAACTAAATTTGACTTAAATATTAATTGCCTTGAAAAATTTCAGCTATTT 15634
90 N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I 119
15635 ATTACAAAAGCATTATCTGACGAAACTTCTAAGTATTTAGCT 15676
120 N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15826
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 52 Length-adjusted: 0.39
15827 TGTGCAATTTCCGATACTTATTCTTTTCCTGATTCTTTTATGCAAGAATGTAAATGTATAATATCAGATAAAGTTTTA---ATGAAGATA 15913
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
15914 TCAAAGAAAAAGAAAACTATTGTATTT---TTAAAAAAACTATTAATAGTTTTTTATGATTATGCTATAAATAAAATAAATAAAAAAGAA 16000
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
16001 CCTTGGATTTTAGAAAATATCATGGATCGGATTATAATTAAACAA---AGTACAATGGCAGATCTTTACGGAATGACAATAGGAGGTAGT 16087
61 S S I L A N - Y D S V L I D S F A S S K E I F N S A V V K S 89
16088 CGTAAATCTATTTCAAATGCGCTCATTGAAAAAATAATTGAAAAAGGAAAATTTGATATAAACCTTTCTTATATTCACATATTTTCTGAT 16177
90 N K W I D D S - A R N I N K T S L L D V N K K Y L N A I N D 118
16178 ATATTATCTAAATATTATAAATATTTTTATAAAACTAATTATTTACCT 16225
119 I - N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16219
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.11
16220 TTACCTTATTGTGATACTTATTTAACATTACGAGAATTTCTAAAGAAAATGGAAGGTCCTTTAACAATGTCAACAGAATTTTTAACATGG 16309
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F - F V L K 29
16310 TCATATAATCCAAGAAAAATGAAAATATTACGTATAAATGTTGTAAAATATTCAAAAATAACAAATGACCTTAAATCTTTGAAACGACGT 16399
30 I V L P T V V T I F K L R K K K L E A M V N D I E T L K K E 59
16400 ATGATTAACGTA---GCATATTTTACAGGAAAA---ATTGATCAAACTAAAATATATAACTCAGTTTC-TGCTTTTATTATACATACAGA 16482
60 E S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S 89
16483 GGAAGCCCGATTAATGATGTATTTTATAT-ATTCCTCACAACAACTTAATAAAGCTTTACACGAAAAT-TTAGGTATATCTTATTATTAT 16570
90 N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I 119
16571 ACTCAAAATTATGATTGTTTTGGAATTAATTATAGTTTTATT 16612
120 N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45738
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.10
45739 TTTGTTTCATTATACAAGATTTCTTGAAATAATAATTTTTGTGTTATTTTGAAATTTTTCCTAACAAGATC-GAAACCATTATGCAGAAT 45827
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K - 29
45828 TTTATATTTGATATGTCTAGCCCACCTTTTAATATG---AAAGTGGATGGGCGTTTAATAATCAATGAACTTATCAAAAATGCTAGGCAA 45914
30 I V L P T V V T I F K L R K K K L E A M V N D I E T L K K E 59
45915 CTCAAGAATCCTGAAAAAAAATAT---CTATTTTCTGTATATATTCTTGTTAGCGGTAAAAGAGCT---AACGTGTTACCTTCCGAAGCG 45998
60 E S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S 89
45999 AAAATATTAATATCTGATGCCCTGGACGAATTAAACGATTCAAAATTGGCTAAGATTGGGGATAAGAAATATACTATACTAAAAAGAGTC 46088
90 N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I 119
46089 CTTAAACGTTTTGAAAGTATACGTACTCGTTTATCGAAAGTT 46130
120 N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45915
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.08
45916 TCAAGAATCCTGAAAAAAAATATCTATTTTCTGTATATATTCTTGTTAGCGGTAAAAGAGCTAACGTGTTACCTTCCGAAGCG-AAAATA 46004
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
46005 TTAATATCTGATGCCCTGGAC------GAATTAAACGATTCAAAATTGGCTAAGATTGGGGATAAGAAATATACTATACTAAAAAGAGTC 46088
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
46089 CTTAAACGTTTTGAAAGTATACGTACTCGTTTATCGAAAGTTTTAAACGGCTCC---GAA---TTTTCGGATACCATAGCCAATGACACA 46172
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
46173 GGTCATGTTAAGAAATCTATTATGAATTTAATACTTCGCAGCAAA---GAT---CAAAAACCATTT---ACATCATTTAAT---ATAAAT 46250
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
46251 ATTCTAACTATAGCA---AAACGTATCAAGGATTATGTT 46286
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46604
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.12
46605 TTAAAACTGTTCGTAGGAACAAAATATCTTTTAAAAAGCGTACTTATATTTATATTTATTGCTGGCTTATATTATTTTTTTACTAAGTAT 46694
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
46695 ACAGGAGCAACACCAGCGATTCCAGTAACTCAAATGCCTTCAATACTCAATCCTACTCATATTGCATATATTCAACAATTAGAAGCTTTT 46784
31 V L P T - V V T I F K L R K K K L E A M V N D I E T L K K E 59
46785 CAAGCAGCAACTTATGTTGAAGGGAAATTTTCAGTGTTAGAGGGTATTGAATATATACATAATAAT---CAACCACGATTAAATAGGGTT 46871
60 E S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S 89
46872 GAGGACACCCATAGTTTACAAGGTGAAAATACTTCTTATCATCTTTTTATAGAAGAATACAAGTCTTTTATTCTTGGCTTAAATCCA--- 46958
90 N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I 119
46959 GAAAAACAAGGTATTGCTATTAATTATTTACAAACCATTATA 47000
120 N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53426
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.06
53427 TGGAGCCAATTTAAATTTTAAAAATCTCGGAGCGTAGCTAACTGGTAGAGCATTCGGTTTGGGACCGAAAGGTTGCGAGTTCAAATCTTG 53516
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
53517 TCGCTCGATTCTTTTAATCAGAACTCTAGGTTTTAGATTAAAATAAATATGCTTAATTTTTTAATTGGTATTTTAATAATATTCTTTGCA 53606
31 V L P T V V T I F K L - R K K K L E A M V N D I E T L K K E 59
53607 AAAGAATTCATAATTTTAAATCAAGAA---ATTATTATTTATTCTATATTTCTATCAATTTTATTTTTTTGTATAAAATCTTTTGCTTCA 53693
60 E S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S 89
53694 TTGGATACAATATTTGAAAATATTCGCTCT---AATGAAAAATCCAATTTAAATCTTAATTCTAAAAACGAGAAAAATTTTAATGATACA 53780
90 N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D - 118
53781 TTAAATCAACGTTATCTT---TTGAATTCAGCTTTAAGTCCAATA 53822
119 I N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61720
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 31 Length-adjusted: 0.23
61721 TTTCCAATATTATTTTTTATAATAATATTAAAAATTTTATTAATACGTGAAATTTTTTATTTTCATGAATTAATTACATATTTAAAAATA 61810
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
61811 ATA---CCTATAAAATTTGATAAAATTTCTTTAATTTTTGATAATTTACAAAATATTAATCTTATTAATTATGATTTTAATAAAAAAAAC 61897
31 V L P T V V T I F K L R K K K L E A M - V N D I E T L K K E 59
61898 GAAAATATGATTTTATATCAATATGCTATAATTTTCCCTATGATTTATAAGGGAAATACAAAAAATTTTATTTGTAAAAAAATTACCATA 61987
60 E S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S 89
61988 AAAAATTTTATCCGTTTTTATCCAGGTCATGTGAATAAAATTATCAATATTATTAATACTTCTCTAAAAAAAGTATCACCACAAGCACTT 62077
90 N K W I D D S A R N I N K - T S L L D V N K K Y L N A I N D 118
62078 ATTGAACAAAATCGAATAGAAGCTAATAAAATGATTATTTATGCA 62122
119 I N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61969
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.05
61970 TGTAAAAAAATTACCATAAAAAATTTTATCCGTTTTTATCCAGGTCATGTGAATAAAATTATCAATATTATTAATACTTCTCTAAAAAAA 62059
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
62060 GTATCACCACAAGCACTTATTGAACAAAATCGAATAGAAGCTAATAAAATG---ATTATTTATGCATTCTGCGAACATTTTAAAAATGAT 62146
31 V L P - T V V T I F K L R K K K L E A M V N D I E T L K K E 59
62147 AACTTATCTGATTTATTAGATGATCACAAAATTATTAATCGTATGCATGATTTTATTCATAAACAACCAACTCTTAGTTCAAGAGCATTT 62236
60 E - S S I L A N Y D S V - L I D S F A S S K E I F N S A V V 87
62237 CAATTAGCATTGGAAGTTTCATATTCTAAACGTTCTTTTAACGAAGCTACTTTGCAAGATTTTTTCAAAAATGAATTTAACATTAGAGAT 62326
88 K S N K W I D D S A R N I N K T S L L D V N K K Y L N A I N 117
62327 ACCTTTAATGTTAATAATGGAGTATGTGATCAA---AGCACTATTTTT 62371
118 D I N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62342
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 618 Protein length: 133
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.09
62343 ATGGAGTATGTGATCAAAGCACTATTTTTT---CAGCACTAATGGCTAAATATGTTGTATCTTATTATA---ATTTGAATTCAAAAGATA 62426
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
62427 TTATTG---TTAATAGTACA-CCATTATATTTAACAAAAGATATTTCTCCTGAAATAAAGGCCAGCATGGAA---TTTAATAAAAATTTA 62509
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
62510 ACAGGAAAT---TCGTGTCCTGATATTACTTTAAAAGAACATCCTTATGATTTTAAAGATTCAAAGGATATAAAATGGAATAAAAATCAG 62596
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
62597 ATTTATTTGGTTGATAATACT---AGTTTTAATGAACAGGCTATAATAATGTTAAATCATTTGGAAAAATCTTTGATTAATCAATTAACT 62683
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
62684 GTTAATCATTTGATGTCTAGTGAATGT---GTTCTTTAT 62719
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 2745
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.14
2746 ---GATGATTTAGAATCTATAACAATTTTTTCTTGTTCTTTATTTATAATAATATC-TTTTTTAA-TTTTACAAATTTGTTTTAAAGGTT 2830
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
2831 CATATTGAAAATCATAAGACTTC-CAAAGAGTTAAAAGTTCATTAGCATTCTCTATACTAACCCCTTTAGTAACATAATTTTTACGAATA 2919
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
2920 TCATCAATAATGCTT---TTTACTTGTTCTTTATTCAAAGATTTT---TCCTGTATAGCTATTTTCAAATCTTTAATTATTTTTTCTAAA 3003
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
3004 TTATATTGAATATCGGATGATCCTTGTTTTGTATCATAAACGGCTGTAATAGGCACTGTATAATTATCAGACTCAGGTTTATGGAATTTA 3093
91 K W - I D D S A R N I N K T S L L D V N K K Y L N A I N D I 119
3094 AATTCAACATTTTTT---TTTAGGTAATTCCATACTTTACTA 3132
120 N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32699
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.07
32700 TTAGACAAGTTTTTTGGATCTACCTTATCAAATAATTCTTATTCACTTCTTATCAATTATTTAACAAGTACAACTAAGATTATCTTCTTA 32789
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
32790 CATGTTGAAACACTAATTTCT------CAAGCCCAGTCCTCTTCACTACGTCCACTCTTAAATCCTTTCCCATCAGTTGAATCTAA-AGT 32872
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
32873 TCCCTAATACGAAGTAAAGTTAATCCATTAATAATT---TCT---CAAGATTCTCAG------TGGTGTAGTGCTATT------GCGAAT 32944
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
32945 ATCTTTTTAAAAGAT---GCTAATTTGGCAGATTACTTAAAGATATTTCCCGTAGGCGCAAAGTATTTAAGTTCCTTT---GAA---CAG 33025
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
33026 AAAACAATATTATTTTTTATTCGCTTA---AATGTAATT 33061
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32929
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.12
32930 TTTACGCAA---AATAAACCTACGGATCTAACTTATTATTTTTATCTT---ATCAAACTAATGTTTTTTCCAGAAGAATCAGATAGTTAT 33013
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
33014 AAAGTACCG---TTATTTACCTCT---GAA---CAAAAGAAGCAAGTAGAAGGTTATCTTTCTGAGCATATAAACTTATTTGTAATTCAA 33094
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
33095 GATTTTATTCTAAGTCATTATCAA---GTGCCTCCAACAACATTTACGGGTAATTTTCAAATATCCAAACTTATTAATAAACCTTTAGAC 33181
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
33182 AAGTTTTTTGGATCTACCTTATCAAAT---AATTCTTATTCACTTCTTATCAATTATTTAACAAGTACAACTAAGATTATCTTCTTACAT 33268
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
33269 GTTGAAACACTAATTTCTCAAGCCCAGTCCTCTTCACTA 33307
121 K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33475
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.06
33476 CATCCCGAGACTACACATACAGCCTTATTTCAAACGTATGTCCAAATAACAAGTTATCATGGAAAAACAACAATTCCAAATGCTTGTCAA 33565
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
33566 CTAAGTCGCTTAATTAATAGTATGACGAAAAATACAACATTGTACTTTAATCGTCTAATTCTCTTAATAGATTTAGAGCCTATCTTAATG 33655
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
33656 AATGGTTTTCGTTTATCAAAACTTAATATACTGACTCCCATAGCAGAGTATTATAATACTATGTTTTCCAATGCAGTATTAAAGGAAACA 33745
61 S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S N 90
33746 GAA------AATAAACTCATCAATAATTTAAAAGACGACTCTTTAATCACATTGTATAATAAATATTTGATACATTCCCCGGATGAGCGT 33829
91 K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I N 120
33830 GCAGAGTATGTCGACATCTATTTACCGTTGAAGGACTTCAAA 33871
121 K E Y L - A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44698
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
44699 GCACCTACATTCGATATTGTAACATATGAAACAATTAAGTTACAGATATCTTCTGAATTACGGAAAACCATTATTAATTATCTTTTTTGT 44788
1 M P Q L D K V T F F S Q Y F W L L I - F F L T F Y F F V L K 29
44789 GTTAATAATTTAACATTAATTAGTATT---GGCTATCCTATTAAACGC---GACGCTTTGTACAAAGCGTTTACTATAATACATGATTAT 44872
30 I V L P T V V T I F K L R K K K L E A M V N D I E T L K K E 59
44873 ATTAATAATATTAGAGCA---TATGATAGTTTACCTTCTGAGTTATTT---ACGCGCAAA---CTTTTGAAAGGTGCTACAATGAAATTA 44953
60 E S S I L A N Y D S V L I D S F A S S K E I F N S A V V K S 89
44954 GGTTATTCACAAGGTCAAGAGTTTCGGGAGTTAGATTTTCAACAATATATTGAA---GAT------TATTATTCATCT---AAAGGATTT 45031
90 N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I 119
45032 AATAAAGTACCCATAGACTTTTCACGCATGTTGAATTTATTA 45073
120 N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44857
Protein: lcl|KC353356.1_cdsid_AGH24284.1 [gene=atp8] [protein=ATP synthase F0 subunit 8] [protein_id=AGH24284.1] [location=31686..32087] @ 0
DNA length: 798 Protein length: 133
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.06
44858 ATTTATCAGATAGCGATAAATTCCTTTATTTATAAA---ATTGAAATTCAACGTAAATTTTTAGAA---TCCTTCTTT---TTAAAGATT 44938
1 M P Q L D K V T F F S Q Y F W L L I F F L T F Y F F V L K I 30
44939 TTAAATAAATCGTTAGTAGAG---TTT---TTAAATCAAGAGAAATCTGAAACTTTGGGATATGCTCTTTTTATATTGTGGACAGCACCT 45022
31 V L P T V V T I F K L R K K K L E A M V N D I E T L K K E E 60
45023 ACATTCGATATTGTAACATATGAAACAATTAAGTTACAGATATCTTCTGAATTACGGAAAACCATTATTAATTATCTTTTTTGTGTTAAT 45112
61 S S I L A N Y D S V L I D - S F A S S K E I F N S A V V K S 89
45113 AATTTAACATTAATTAGTATTGGCTATCCTATTAAACGCGACGCTTTGTAC---------AAAGCGTTT---ACTATAATACATGATTAT 45190
90 N K W I D D S A R N I N K T S L L D V N K K Y L N A I N D I 119
45191 ATTAATAATATTAGAGCATATGATAGTTTACCTTCTGAGTTA 45232
120 N K E Y L A F N K I K S L I 133
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3100
Protein: lcl|KC353356.1_cdsid_AGH24285.1 [gene=rps4] [protein=ribosomal protein S4] [protein_id=AGH24285.1] [location=32514..33263] @ 0
DNA length: 1494 Protein length: 249
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.01
3101 CAAGAAAAAATTGTTATAGATTCTAAATCATCTTATGAAGAAAAATTGAAAAATTTAGAAGAAAAAATGTCAATAGCTCTTAAAAATATA 3190
1 M T K R I S S K R K V Y T Q I G V N I W G K G P F L W K G T 30
3191 AATAATTTTCTTGAAAAAAATAAAGATTATACTAAAGAATTTCTTGAAGCAAAAGAATTACAAGAATGGTATGATTATTTTCAGAATAGA 3280
31 K K - - D K W K N T P G E H K K K H K L L E R Y S P M I R G 58
3281 GGAGCATTAAAAAAATTATCAAAACAAGAAAAAGAAGTTTATGATAAATTATTAGAAATAAAAAATAAATATTTACCTAGCGAAAAAGAT 3370
59 D S I N E M S T L G Y L I S K P K N E V K I S Y Y E P K Y A 88
3371 TTTCAAGAAAAAAATAGTAGTTATTTGACACCTCTGAAAAAAAATAGTGCTTTACCTATTAATTTACAAAATGAAAAATCAGCTAAATGT 3460
89 S Q L K E K Q K L K K F Y G N V T E K Q F Y N Y Y K K A K S 118
3461 TACTTGCCAAAAGATTATGTTATGGAAATAACAAATATAGAACGTGCTCTTGAA---ATTTTAAATAAATCACAAACATTA---TCTATT 3544
119 F K G R I G D N L I K L L E R R L D T I L Y R A G F V N S I 148
3545 AATGATCTTAAATTGTTATCCATTAATTCTTCGGCAGTTACTATAGATACAGAAGGTGTTATTAAAATATCACAAGAGGCGTATCAGTCT 3634
149 Y Q A R L L - I N H G H I F V N N E K Q N I S S Y L V R Q N 177
3635 TTTACTAAATATAAAGATAGCTTAGGATTTAAATATTTATTAGAATATCCAAAAACAGAAGAAATATTATTACGTATAAAAGAAAGGAAT 3724
178 D L I S I N S - N I I S L L S D Q Y N W D L L K K S N G S V 206
3725 TTT---TTTATTGCTAAA---AATATGGATTCTAATCCTAATGGAATTATTGCTTTAGCTCACCTATCACATAATACATTAATTATTCCA 3808
207 L K Y V S Y L E I D Y K T M S C V Y L Y T P K I N E I Y F P 236
3809 AACCAAACCGAGAAAAATTTATATGTTAGGGTAGGGCTT 3847
237 F V L D M N K V I R Y F V 249
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4910
Protein: lcl|KC353356.1_cdsid_AGH24285.1 [gene=rps4] [protein=ribosomal protein S4] [protein_id=AGH24285.1] [location=32514..33263] @ 0
DNA length: 1494 Protein length: 249
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
4911 GAAACAAAAAATATAAATGATGACCAGATACAAGTATTTGTCTTTTTTATGCAGATATTTCCTAGA---ATTATCTTAGTTTCTATTTTA 4997
1 M T K R I S S K R K V Y T Q I G V N I W G K G P F L W K G T 30
4998 ATGATAGATACATTTTATTTTAATAAATTAGAAATATTTTATAAATTTGTATTATTGGGCTTATTTCCTTTTATTTTTAGATATTTTAAA 5087
31 K K D K W K N T P G E H K K K H K L L E R Y S P M I R G D S 60
5088 TATTCTTTAAAAGATGTTTATGAACACTGGATTGTAGAATTGGAAAATAAATATTCGTTAGTAAGAATTTATGAAGTTGGATATAAATTT 5177
61 I N E M S T L G Y L I S K P K N E V K - I S Y Y E P K Y A S 89
5178 GATGATTCTCGTAAAAAAAATACAAAAGCTATTTATCATGAT---GAAGAAAAAACAATACGGGAATATATAGAA---ATTAAA---TTT 5258
90 Q L K E K Q K L K K F Y G N V T E K Q F Y N Y Y K K A K S F 119
5259 AATAATATTATA---GATTATTTACTTGATGAAGTTGATTATGAGTATGAATCAACTCCTTATTGTAAAAGTGAAGTCTATAATGAATAT 5345
120 K G R I G D N L I K L L E R R L D T I L Y R A G F V N S I Y 149
5346 TGTTTAAATAAATATAAAAATAAAAAAGCTCTTTATACAAGTGAAGATTTAGATATTTTGAGAGCCTTATATTGTGAGCTTATGCCAAAT 5435
150 Q A R L L I N H G H I F V N N E K Q N I S S - Y L V R Q N D 178
5436 ATTATTCATTTAAAAATG---TTTTTATCTAGGATAGAAGTTGTATCGGAAGTATCCTTAATGAAAACGTCAAAA---ATAGTAATA--- 5516
179 L I S I N S N I I S L L S D Q Y N W D L L K K S N G S V L K 208
5517 TTTGGGGGGTATTTA---GTATGTTGGGCTTATATATTAATTATAAGTTATTATAATTATCCTATAGATTTAATTATGAGTAAATATCTT 5603
209 Y V S Y L E I D Y K T M S C V Y L Y T P K I N E I Y F P F V 238
5604 TTA---TTAAATTTTATGTTA---TATTTGGTG 5630
239 L D M N K V I R Y F V 249
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6492
Protein: lcl|KC353356.1_cdsid_AGH24285.1 [gene=rps4] [protein=ribosomal protein S4] [protein_id=AGH24285.1] [location=32514..33263] @ 0
DNA length: 1494 Protein length: 249
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.00
6493 ACTGATAAAAAAATAGGTCATGCTAAAAAATTGCTTGATCACCGTTCAATGTCT---TTTTCTAAAAGA------ATT---TCGAATCCA 6570
1 M T K R I S S K R K V Y T Q I G V N I W G K G P F L W K G T 30
6571 CAATGTCGTAAATTGCGTCAACAATGTAAACAGCATCATAATAAATATATTACTGATACAAAAATACAAACTAGACATAGAGGTTTAAGC 6660
31 K K D K W K N T P G E H K K K H K L L E R Y S P M I R G D S 60
6661 AATAGAGAATTACAAGGTATTCGATCTCCATTGAGTAGTAAAAAGTTTAAGGAGGTAAATAATATTGATATGAAAAATCCTTTTCAAAAC 6750
61 I N E M S T L - G Y L I S K P K N E V - K I S Y Y E P K Y A 88
6751 TCACAA---AAAGTGTCAGAACCTTTTTCACCTCTTACA---AGTATAACTAAAACCTGTAAAACAACATTTAAATCCTTTATTAAAAAA 6834
89 S Q L K E K Q K L K K F Y G N V T E K Q F Y N Y Y K K A K S 118
6835 GATTCATTATCAATTGCCTCTAACCAAATACCATTGCCTGAGAGTATAAATAACACAATAAGTCACGAAAATCAAAATATAAAT---CTT 6921
119 F K G R I G D N L I K L L E R R L D T I L Y R A G F V N S I 148
6922 AGTGATCCTACATTTCCAATACCTCCATTGCATTTTGGTATTACTAATGATACCCAACATACCCCGTCTACTACTGTT---TTAAATGAT 7008
149 Y Q A R L L I N H G H I F V N N E K Q N I S S Y L V R Q N D 178
7009 TTCTCTAAAATAGAT---AATACTTCTTCAAGCGTAAAACCA---ATTCCT---GAATTA---AAAAATCCAGACGGT---GTTATA--- 7080
179 L I S I N S N I I S L L S D Q Y N W D L L K K S N G S V L K 208
7081 TATACTACTAATATTACT---GAAAAAACAAGTATGGAAGAATTA---ACCAAGCAGCAACTTATTGATGAATTAAAAAAACGTAACTTG 7164
209 Y V S Y L E I D Y K T M S C V Y L Y T P K I N E I Y F P F V 238
7165 ATAAAAATAACAAAATCTCCTGCAGTTATTATT 7197
239 L D M N K V I R Y F V 249
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2653
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
2654 ATAGAAAAACTTATAGAAGCTGATACTATA---GCGGAAAAAATACAAGGTAATTCTCATATT---TTTAATCCATTAAGATTAGTTTAT 2737
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
2738 AACACCAGTAGTAAAGTATGGAATTACCTAAAAAAA---AATGTTGAA---TTTAAATTCCATAAACCTGAGTCTGATAATTATACAGTG 2821
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
2822 CCTATTACAGCCGTTTATGATACAAAACAAGGATCATCCGATATTCAATATAATTTAGAAAAA---ATAATTAAAGATTTGAAAATAGCT 2908
61 I L L R N F - I G G I S Q E Q Q F I L E S P I I N Q V D I L 89
2909 ATACAGGAAAAATCTTTGAATAAAGAACAAGTAAAAAGCATT---ATTGATGATATTCGTAAAAATTATGTT 2977
90 G K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2803
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 33 Length-adjusted: 0.29
2804 TCTGATAATTATACAGTGCCTATTACAGCCGTTTATGATACAAAACAAGGATCATCCGATATTCAATATAATTTAGAAAAAATAATTAAA 2893
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
2894 GATTTGAAAATAGCTATACAGGAAAAATCTTTGAATAAAGAACAAGTAAAAAGCATTATTGATGATATTCGTAAAAATTATGTTACTAAA 2983
31 I T T S Q Y K N K K - R K Q N M K G I C I A I K K R I G Y T 59
2984 GGGGTTAGTATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAGTCTTATGATTTTCAATATGAACCTTTAAAACAAATTTGTAAAATT 3073
60 T I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L 89
3074 AAAAAAGATATTATTATAAATAAAGAACAAGAAAAAATTGTTATAGATTCTAAATCATCTTATGAAGAAAAATTG 3148
90 G K - I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3337
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.16
3338 ATAAAAAATAAATATTTACCTAGCGAAAAAGATTTTCAAGAAAAAAATAGTAGTTATTTGACACCTCTGAAAAAAAATAGTGCTTTACCT 3427
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
3428 ATTAATTTACAAAATGAAAAATCAGCTAAATGTTACTTGCCA---AAAGATTATGTTATGGAAATAACAAATATAGAACGTGCTCTTGAA 3514
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
3515 ATTTTAAATAAATCACAAACATTATCTATTAATGATCTTAAATTGTTATCCATTAATTCTTCGGCAGTTACT---ATAGATACAGAAGGT 3601
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
3602 GTTATTAAAATATCACAAGAGGCGTATCAGTCTTTTACTAAATATAAAGATAGCTTAGGATTTAAATAT 3670
91 K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3817
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 34 Length-adjusted: 0.30
3818 GAGAAAAATTTATATGTTAGGGTAGGGCTTGTTACTAGTACTAAAAGT---GATTCTAATATTAAAATTGATAGTTATCAAGTTACTAAT 3904
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
3905 ---GAGGATTCTAATAAACAAAATAAAGATCAAATGTTTCGTATTTTTCCTACTTTTTTAATTGTAGATGAGAAAATTGAGCCCTTAATA 3991
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
3992 GTAAATCTTGAAATGACGTTGTATTTTTATGGCAAAAATACAGATAATAAAAGTATTGTAGAAGAAATCATATTTACGCAATATGATTTA 4081
61 I - L - L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I 88
4082 ACAAAAAATATATGGTCCGAAAATTATTACCAA---TATCCTTTTAATGTGGATCAAGAATTTTTACGTCAACTT 4153
89 L G K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4198
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 29 Length-adjusted: 0.26
4199 TATAAAGAACTACAAGATAAATTATAT---TCACTTCTTATTAAAAGT---CACGAAGACTATAATAAGGAAATAGATCGCCTTAATGAA 4282
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
4283 TTAAAAACAAATTATTTGAAAGATAGAAAATATAAACAATATTTTAATTCATTAACAGATGAAGAACAAAAATTAGTTTCTCATATAAAA 4372
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
4373 ATTTTTCAAGATAAGATTAAAGATGATAATATACAAAATGAAAAA---AAACAAAAGAAAGAACTTATTAATCAACTTTTGGAAAAAAAT 4459
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
4460 AAA---AAAGGAAAAGATAAAGAAGAAGGAACAGAAATTTTAACTGCAAAACAAAAAAAGGAGAAATAT 4525
91 K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5066
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.16
5067 TTTATTTTTAGATATTTTAAATATTCTTTAAAAGATGTTTATGAACACTGGATTGTAGAATTGGAAAATAAATATTCG---TTAGTAAGA 5153
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
5154 ATTTATGAAGTTGGATATAAATTTGATGATTCTCGTAAAAAAAATACAAAAGCTATTTATCATGATGAAGAAAAAACAATACGGGAATAT 5243
31 I T T S Q Y K - N K K R K Q N M K G I C I A I K K R I - G Y 58
5244 ATAGAAATTAAATTTAATAATATTATAGATTATTTACTTGATGAAGTTGATTATGAGTATGAATCAACTCCTTATTGTAAAAGTGAAGTC 5333
59 T T I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I 88
5334 TATAATGAATATTGTTTAAATAAATATAAAAATAAAAAAGCTCTTTATACA---AGTGAAGATTTAGATATTTTG 5405
89 L G K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6459
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.04
6460 ATAGTCATTCAAATA---TCTAAGCGTTTTTATCCCACTGATAAA---AAAATAGGTCATGCTAAA---AAATTGCTTGATCACCGTTCA 6540
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
6541 ATGTCTTTTTCTAAAAGAATTTCGAATCCACAATGTCGTAAATTGCGTCAACAATGTAAACAGCATCATAATAAATATATTACTGATACA 6630
31 I T T S Q Y K N K K R K Q N M K G I C I A - I K K R I G Y T 59
6631 AAAATACAAACTAGACATAGA---GGTTTAAGCAATAGAGAATTACAAGGTATT---CGATCTCCATTGAGTAGTAAA---AAG---TTT 6708
60 T I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L 89
6709 AAGGAGGTA---AATAATATTGATATGAAAAATCCTTTTCAAAACTCACAAAAAGTGTCAGAACCTTTTTCA 6777
90 G K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6459
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.04
6460 ATAGTCATTCAAATA---TCTAAGCGTTTTTATCCCACTGATAAA---AAAATAGGTCATGCTAAA---AAATTGCTTGATCACCGTTCA 6540
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
6541 ATGTCTTTTTCTAAAAGAATTTCGAATCCACAATGTCGTAAATTGCGTCAACAATGTAAACAGCATCATAATAAATATATTACTGATACA 6630
31 I T T S Q Y K N K K R K Q N M K G I C I A - I K K R I G Y T 59
6631 AAAATACAAACTAGACATAGA---GGTTTAAGCAATAGAGAATTACAAGGTATT---CGATCTCCATTGAGTAGTAAA---AAG---TTT 6708
60 T I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L 89
6709 AAGGAGGTA---AATAATATTGATATGAAAAATCCTTTTCAAAACTCACAAAAAGTGTCAGAACCTTTTTCA 6777
90 G K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7224
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
7225 ATTGGTAATAAAGATAATGATTTAATATTTACGAAACACGGGCGAGCGTAT---TTAGAATTACAGCCAAAAAGT---CAAATTTTTATA 7308
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
7309 AATCCTTTAGAAATCACCAAAGAAAATATTACTCTTGATGATTTAAATAATTTTTGTATTATTGTACCAAAAAATTATGAGGATGATCTT 7398
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
7399 ATAAAAGCCTCGCCACATATGATAGCAGCTTATGATCCTACTAATACTCATTTGTACGCATTTTCTACATTTACAAGCGAAAAAGTTGGT 7488
61 I L L R - N F I G G I S Q E Q Q F I L E S P I I N Q V D I L 89
7489 CTAAAAGTA---AGTGATGAGCAATTTAAAAAATTTCAAATGAAAAAACAAGGTATAGTATTTACTAAAGAA 7557
90 G K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7746
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.04
7747 ATGCCACAAACAATATCAAATGAACAATTATTAAATATGTGCAAAGATGTTGACAAAGAAGCTCAAAAAAAAAAACCTAAACACCCTATG 7836
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
7837 ACTCTTGAACAACAGCAAAAAAAAGAAGTTGAAAAACAGAAAAATCAATTATTTCAACTACAAAATAAAAAATG-ATAGATATTATTTCA 7925
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
7926 AGGATAATA---AATTTAATAATTAAA---AATATACATCGTTTATTTCCCGTATTTGGATTTATATTACTTTCATTATATATTTGGGGT 8009
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
8010 AGGTATATAAGAAATAGATTACCACGAGAAATACCTTTTGA-TTTAACATTATTACGTTTAATAATGTT 8077
91 K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8736
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.13
8737 CCTGGAAATCTTGTGGAGAT-ATAAAAAACACCATTATCGAAAAGGATCTTAATTTAATAATTAGATTAAAAAGT------ATTATAACA 8819
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
8820 ACACATGAGATAATTACTAAATGGACAAATGTACAACAAAATATAAAAAATATTAGAATTATAATA------TATATAGGATATTTAATA 8903
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
8904 TGCTGGGCTTATATATTATACGTAAGTTTATCAAATTTTAAAGATTTTTATATGTTATCATGTATAATTGAAGTGATAAAAACTCATCTT 8993
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I - L 89
8994 CTACAAGGTAAAGTCCCACTAAAATTATGTATATTTTTATTAATTATAATTTTTTATAATGAAAAAGAACAA 9065
90 G K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9444
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.11
9445 CAAATACCT---ATTAAAGATATGTGCTTAAAAGCAGTCAATTATGATGTTTATTTTGACATAAATGAGCAGGATAGTTTTTATGTTACA 9531
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
9532 ATAAAACAGAATCCTTATAGTCCTATTGAAATTAGTCTTCAACATGATAATATTTGTTTGCACACTTTCCATTTATTACTTATTGAAGAA 9621
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
9622 ATATTTCTACAAAACTTTCAAGATAATATTGAACCATTTTCTGATCTCTTACTTAAAGATGAA------AATGAAAGTAATAAATTTTAT 9705
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
9706 AAACA-AAA---AATGTTATTAATAAAAGATACTTATAATGTTTAACAAATTATTTTTCATATTACAGATAT 9773
91 K I K S N N K A K K Y Y - L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9739
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
9740 ATGTTTAACAAATTATTTTTCATA---TTACAGATATTAATAAAATTTAAATATTAT---TTCATGATATTTATTGTTTTAACACTAAGT 9823
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
9824 TTATGTTTTGCAATTATTATACATTATAATTATAATAAAAATAAAAAA---CTACTAATTAATAAAAAACAAGAGCTTTCT---AA-ACT 9906
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
9907 ATTAGATTATTTATATATCAAAGATATAAAAATGGAAATATTAGATTTATTTTTATTAAACTTATTTACAATAGGATTGATTTTTTCCTT 9996
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
9997 AAGAAATCTTAATATTGGAGCAACCATAAATATTTTCTT---ATTTCGACCAAGTCTTGTAATATTATC 10062
91 K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13548
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.15
13549 AAATTCCAAATAATAGCATACGATATAGTAACTAAAATTTATAAAGCTCTT---AAGAACACATCAATTACTACCACCGATCCTATT--- 13632
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
13633 GTGAACACTTTTATTTATAAGAACGAACGTATTAATTTAGAT---AAAGAAGCATGCGAAAAGGCTTTTAAA---ATA---ATAACAACG 13713
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
13714 ATATTACAAGAAGATGAAAAAAATTTAATTAAGAAAAAACAAACCACAACAAAATGGGAAAAAGTAATAAGAAAAGTA---ATATACGAT 13800
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
13801 GCAATTATGGAAGCACAAAATATAGAAAAATCATCAATATCGAATTTCAATGGTAAAGAAATCTTTTTT 13869
91 K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13779
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.10
13780 ATAAGAAAAGTAATATACGATGCAATTATGGAAGCACAAAATATAGAAAAATCATCAAT-ATCGAATTTCAATGGTAAAGAAATCTTTTT 13868
1 M V N L I E T L R L E A T N K S R N K D I Q I K S - G D I L 29
13869 TACATTATTAAAAGAAGATCATATAAACATGATAAATACAATAATACAAAGAAATATTGCTTATCTTTGATGGAAAGAGTA---TGGACA 13955
30 S I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T 59
13956 ACATTTCAAGATAAAAAT---ATTACTAGTATTCA-ATTCCTGAAAACATCGTATGTGAATTAGCAATAGGTATAGGTACTTCTTATATT 14041
60 T I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L 89
14042 GAATGGTGGTACAGTATTTTTATTAATAAAAATATGTAT---AAAAATAAAACTTATGAAGAATTTTGCACT 14110
90 G K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14698
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.17
14699 AATATAAATCATGTAAAAGATTTTCTAGTATTTATAGGTAATCATAACAAATTATTTGATAATCACTTATGCAAA---AAACTAATT--- 14782
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
14783 CTTACAAAAAAACAATATTTATCTAAATATTCAAAACTAATGGAAAAGGGTTTAGAAAATAAACTCCATAAAAAAACTAGTAGTATTCAT 14872
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
14873 ACTCTTGATCAATACATTCAACATGATTTGAATAAAAATGAACAGAGTACTAAAGACTTAGCTATTTTAGCTAAAGAGATAAATGCTGCT 14962
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
14963 AAACTACTTTTAAATTGCTATTATAAAGTAGTTGCTCAAAAATTTTATAATGCTCATTTTATAAAAGAT 15031
91 K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15337
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.11
15338 TTAATACAACATAGCTTAAGTTTTGATTATTTATCTAAAATGATACACATAATTAAAAATTATGCTAAAAAACCTGGGGAGATATTAAAT 15427
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
15428 ATTCTTAGTATTTTATATTATAAAGAAAAAAATGCTTTATATAACAATAGTGAACTTGTTATATTTTTAGATAGTACAATGAGCGGGTCT 15517
31 I - T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T 59
15518 CAACATTTAGCAACAATATTTAAAAATAAATTAGCAGCTAAAAATAGTTGTTTAATTTCTACAGATGAA---ACTAAATTTGAC---TTA 15601
60 T I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L 89
15602 AAT---ATTAATTGCCTTGAAAAATTTCAGCTATTTATTACAAAAGCATTATCTGACGAAACTTCTAAGTAT 15670
90 G K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16085
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.09
16086 GTCGTAAATCTATTTCAAATGCGCTCATTGAAAAAATAATTGAAAAAGGAAAATTT-GATATAAACCTTTCTTATATTCACATATTTTCT 16174
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
16175 GATATATTATCTAAATATTATAAATATTTTTATAAAACTAATTATTTACCTTATTGT---------GATACTTATTTAACATTACGAGAA 16255
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
16256 ---TTTCTAAAGAAAATGGAAGGTCCTTTAACAATGTCAACAGAATTTTTAACATGGTCATATAATCCAAGAAAAATGAAAATATTA--- 16339
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
16340 CGTATAAATGTTGTA---AAATATTCAAAAATAACAAATGACCTTAAATCTTTGAAACGACGTATGATT 16405
91 K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16279
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
16280 TTAACAATGTCAACAGAATTTTTAACATGG---TCATATAATCCAAGAAAAATGAAAATATTACGTATAAATGTTGTAAAATATTCAAAA 16366
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
16367 ATAACAAATGACCTTAAATCTTTGAAACGACGTATGATTAACGTAGCATATTTTACAGGAAAAATTGATCAAACTAAAATATATAACTCA 16456
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
16457 GTT------TCTGCTTTTATTATACAT---ACAGAGGAAGCCCGATTAATGATGTATTTT---ATATATTCCTCACAACAA---CTTAAT 16531
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
16532 AAAGCTTTACACGAAAATTTAGGTATATCTTATTATTAT---ACTCAAAATTATGATTGTTTTGGAATT 16597
91 K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22659
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.16
22660 GCTAAAGATTTCCTACGAGTTATATTGATATGCTATAGATCAAGACCTTTTAGTAGATTTATAAGA---AAAAACGGTTTAATGTTTCAA 22746
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
22747 GTCAAAAAGAACTATTATGCCTCACGCTTTGAGAAAATACGTGAATCTGT-ACGTGT---ACCTTAAGATCTCGTAA-ATATATAACATA 22831
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
22832 GGTATAACACGCAGA---GTAAATAAGATAATATCCGAACTA---CTAATACTTTTTCAAAAAAAAAAAGATATAAAAAATCTTTTAAA- 22914
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
22915 AAAGTAAGAAAAAATAATAATATAAAAAGTAATAAAAAATTTAAAAAATCTAAACGTCATACTCGTATA 22983
91 K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 35076
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.15
35077 CTTAACGGTAAAGTACTTTCTGTTTTATTTGATAAAAGAACAACATCCTTTGAAGTCAGATTTTATAAAGAATCAAAAAAGCTTGATCAA 35166
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
35167 ATATTAGTG---AAGTTAGGTTAGAGATATATTTCAATATAACTTATAGGCTTGTGTATGCTCATAAAAAAGATCATTTGTTATTAATAC 35253
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y - T 59
35254 TCTTTTTTAATACGTAATACTTTTGA-TCGTACTCATATGAATTGCATGCGAA-TTATTTTCTCCTATAATTGAAAGTATCATGTTCATT 35341
60 T I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D - I 88
35342 CTGCAGTAGAAAAATATTTTATATAACCATAGTAAATATTATTATTTACGTAA-AAAACTATGCCCTTATCTACTATT 35418
89 L G - K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 41164
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
41165 AATACCAAAAGATATGAAAAT---TCGTTGTGTGTGGAAAATACTTA-CGAAATAAAATCTTACATATTGTTATA---AATGTATCGTTT 41247
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
41248 ATTTCAAAATCTTCCTACAAAGGACAACGTACAAAAGCTAATGCAATGCCATTTATAATTAA-ATCCT-TATAAA---GCTTTGCAGGTA 41332
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
41333 ATATTGTTTTTTATATGCATTAGAAGTGCATATAAAAAAAGAGAA---TTATTAAATAAGAACGTTATGAT-GAGTTAAAAGCTTTGAAG 41418
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
41419 AGGCTAGGCTCAGAAAGAAAAAATGAAAAAAGAAGACAAAAACAAAAAAGCCGTAGATCTAGACAAGAA 41487
91 K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46064
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 29 Length-adjusted: 0.26
46065 AAATATACTATACTAAAAAGAGTC---CTTAAACGTTTTGAAAGTATACGTACTCGTTTATCGAAAGTTTTAAACGGCTCCGAATTTTCG 46151
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
46152 GATACCATAGCCAATGACACAGGTCATGTTAAGAAATCTATTATGAATTTAATA---CTTCGCAGCAAAGATCAAAAACCATTTACATCA 46238
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
46239 TTTAATATA---AATATTCTAACTATAGCAAAACGTATCAAGGATTATGTTATTAATGATAATGATATTCTTATGAATACGGATAAAGAT 46325
61 I L L R N F I G G I S Q E Q Q F I L - E S P I I N Q V D I L 89
46326 AAATTGGCTCAAGCTATTGAAAGTGCTAAACTTATTGATTTATCTAAACCTAAAAAATCTAAAAATAAAATA 46397
90 G K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46109
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.11
46110 CGTACTCGTTTATCGAAAGTTTTAAACGGCTCCGAATTTTCGGATACCATAGCCAATGACACAGGTCATGTTAAGAAATCT---ATTATG 46196
1 M V N L I E T L R - L E A T N K S R N K D I Q I K S G D I L 29
46197 AATTTAATACTTCGCAGC---AAAGATCAAAAACCATTTACATCATTTAATATAAATATTCTAACTATAGCAAAACGTATCAAG---GAT 46280
30 S I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T 59
46281 TATGTTATTAATGATAATGATATTCTTATGAATACGGATAAAGATAAATTGGCTCAAGCTATTGAAAGTGCTAAACTTATTGATTTATCT 46370
60 T I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L 89
46371 AAACCTAAAAAATCTAAAAATAAAATAGATCCTTCTAAAGCTGTTGTTAATACTACTAGTAAAAAGAAAAAT 46442
90 G K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61780
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.11
61781 TTTCATGAATTAATTACATATTTAAAAATA---ATACCTATAAAATTT---GATAAA---ATTTCTTTAATTTTTGATAATTTACAAAAT 61861
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
61862 ATTAATCTTATTAATTATGATTTTAATAAAAAAAACGAAAATATGATTTTATATCAATATGCTATAATTTTCCCTATGATTTATAAGGGA 61951
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
61952 AATACA---AAAAATTTTATTTGTAAAAAAATTACCATAAAAAATTTTATCCGTTTTTATCCAGGTCATGTGAATAAAATTATCAATATT 62038
61 I L L R N F I G G I S Q E Q Q F I L E S P - I I N Q V D I L 89
62039 ATTAATACTTCTCTAAAAAAAGTATCACCACAAGCACTTATTGAACAAAATCGAATAGAAGCTAATAAAATG 62110
90 G K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62107
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.12
62108 ATGATTATTTATGCATTCTGCGAACATTTTAAAAATGATAACTTATCTGATTTATTAGATGATCACAAAATTATTAATCGTATGCATGAT 62197
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
62198 TTTATTCATAAACAACCAACTCTTAGTTCAAGAGCATTTCAATTA---GCATTGGAAGTTTCATATTCTAAACGT---TCTTTTAACGAA 62281
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
62282 GCTACTTTGCAAGATTTTTTCAAAAATGAATTTAACATTAGAGATACCTTTAATGTTAATAATGGAGTATGTGATCAAAGCACTATTTTT 62371
61 I L L R N F I G G - I S Q E Q Q F I L E S P I I N Q V D I L 89
62372 TCAGCACTAATGGCTAAATATGTTGTATCTTATTATAATTTGAATTCAAAAGATATTATTGTTAATAGTACA 62443
90 G K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33589
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
33590 CACGAGAAGTTACAAGAACTTTATAATCGTCAGGTTATATCTCATGTGCATCCCGAGACTACACATACAGCCTTATTTCAAACGTATGTC 33679
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
33680 CAAATAACAAGT---TATCATGGAAAAACAACAATTCCAAATGCTTGTCAACTAAGTCGCTTAATTAATAGTATGACGAAAAATACAACA 33766
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
33767 TTGTACTTTAATCGTCTAATTCTCTTAATAGATTTAGAGCCT---ATCTTAATGAATGGTTTTCGTTTATCAAAACTTAATATACTGACT 33853
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
33854 CCCATA---GCAGAGTATTATAATACTATGTTTTCCAATGCAGTATTAAAGGAAACAGAAAATAAACTC 33919
91 K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 34279
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
34280 TTAATAAAGCTTTTCAACAAAGGTAAAAAGACCCTTATATGCCAACCAACTAATAAAGAGTGTGGATGTTTTATCTGCGACTTCTTTAAT 34369
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
34370 AGGAGGGAGTCTTTAAAGATAGATAAGGCTTTATACTTTCAGATGTTACAGCATTATTCACAAGTATGC---AGAATACCGAATTATGTA 34456
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
34457 TATTTGACGATGACCTATAT-GGGGCAATA---TACAATTTACAGGTAATCTTAGAAAGTGATATGCTTAAAAAGACTCTTATATCCTCG 34542
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
34543 CGAGATAAAGAAGCATATAAGTATATCAAAGAGATGGTAAGGATGTATATAAAAGCATTGTAGTATAAAACC 34614
91 K I K S N N K A K K Y Y L R T K S P S E - N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45437
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 34 Length-adjusted: 0.30
45438 CAAGAAATCTTGTATAATGAAACAAAGTTTTTTGCCAAATTAAAAGCTGCTAATCCTACACTGGATATCAGAAAATTTAAAATAATTCCT 45527
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
45528 TTAACGATTTTGAAACGTTATTATCTTTCTGATAAATATAATTTTAAAGAAACAAAGTACTTAGCTCAACAACAGCAAGCATTTTGTTTG 45617
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
45618 TTCGAGTATTACAAA---AACGGTTATATTATTATTCATTCTCATTTCTTTATG---AACCCTGTACTTTCTTTTACCTATACGTTCGGG 45701
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
45702 ---ATAAAGGAAAATATTACCACTATAGAACAATATATCCTAAGCTTTTGT---AAAGAAAATACAAAT 45764
91 K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45437
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 34 Length-adjusted: 0.30
45438 CAAGAAATCTTGTATAATGAAACAAAGTTTTTTGCCAAATTAAAAGCTGCTAATCCTACACTGGATATCAGAAAATTTAAAATAATTCCT 45527
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
45528 TTAACGATTTTGAAACGTTATTATCTTTCTGATAAATATAATTTTAAAGAAACAAAGTACTTAGCTCAACAACAGCAAGCATTTTGTTTG 45617
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
45618 TTCGAGTATTACAAA---AACGGTTATATTATTATTCATTCTCATTTCTTTATG---AACCCTGTACTTTCTTTTACCTATACGTTCGGG 45701
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
45702 ---ATAAAGGAAAATATTACCACTATAGAACAATATATCCTAAGCTTTTGT---AAAGAAAATACAAAT 45764
91 K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47272
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.12
47273 CTCCAGTATTGTATTGATGATCTTACATTTGCTTTTATAATGAAATAAAAACAAAAACAAACTCTAATCAAATCTGGG---ATATTGCAA 47359
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
47360 CCCTTTTACATTTCTAATAAAAGTACCTTTAAAAAGAAGAGCTTAAGT---TATTGCCTACAGCTAAAACGAAAA---AGTTACTTACTT 47443
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I G Y T T 60
47444 ATTTTGATACTGATTTAGATTAATAATATG---CTAGCGTCTAATTTTATTTTG---------TTT------AAATTACATATTTTGCGA 47515
61 I L L R N F I G G I S Q E Q Q F I L E S P I I N Q V D I L G 90
47516 AACTTTAAGAGTTACAGTATTTGTTGT---TATATATTAATCTTTTTAAGTAGCTCTCGTATGACTCTT 47581
91 K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 48879
Protein: lcl|KC353356.1_cdsid_AGH24286.1 [gene=rpl19] [protein=ribosomal protein L19] [protein_id=AGH24286.1] [location=complement(33340..33681)] @ 0
DNA length: 678 Protein length: 113
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.07
48880 TATATCCCGCTTCTT---GCTTTACACCAGGAA---ACAAAACTATCACGTACCTAA---ATACATTTCGCAGAAAACCAGCTATCTCCT 48960
1 M V N L I E T L R L E A T N K S R N K D I Q I K S G D I L S 30
48961 AGTTTGATTAGCCTCACCCCTAATCACAAGTCATCCCATTCTATGCAACAGAAAAGGGTTCATCCTCCAAAAGTTGTTAACTCATTTCAA 49050
31 I T T S Q Y K N K K R K Q N M K G I C I A I K K R I - G Y T 59
49051 TCTCTCATGATTAGATCACTAGTTTCGGGTTTAAATGAAAAAACTCAAACGATTTAAAATTTGCTTTCCTATGCTATATAATATATAAGC 49140
60 T I L L R N F I G G I S Q E Q Q F I - - L E S P I I N Q V D 87
49141 TTGCTTTTTCATTTATCTCGTTGATCCATGATACAAAAGTACTTTGGTATTTTTCCTTGAAAAACATCAAATGCTTTT 49218
88 I L G K I K S N N K A K K Y Y L R T K S P S E N K V 113
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 225
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.05
226 TTATTGATTAAACTTATTTTATTTATTTTAATTAGAATTTTTCTAATTCCAAATATTTTTTCTAAATATATAATTATTATTTTTTTTAGT 315
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
316 ATTATTATATACATATGTTATAAATATCCT---CGTACCAATATATTAATTAAGGAAGATTTATTCGAATATGCTTTAAAAACAACTAAA 402
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L - T E A 59
403 GAAAAAATGATAAATATATGTATCATAACGTTATATATATTTACTTTT 450
60 I A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 387
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 36 Length-adjusted: 0.48
388 TTAAAAACAACTAAAGAAAAAATGATAAATATA---TGTATC---ATAACGTTATATATATTTACTTTTGTTATAGGTATATTTTATCTT 471
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
472 AGATATATAAATATAACAAAAAAAGTAGACTTAAAAATTTATTATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAAGAAGAAATT 561
31 A L V T A I A R N P S Q F K Q L Q S S A L L G - F A L T E A 59
562 ATTTTAAATGTGGTAATAATAATAACTTTTATAATAATTTATATTTTT 609
60 I A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4787
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.11
4788 AATTTAAAAGATATTATAGAGATATTGTATGCACCTTTGAAAACTATAGATCATGCTATTAAATATAATAAATATATTAAACCTTATTAT 4877
1 M S T E A A K L I G A G C A T I G L A - G A G A G I G T V F 29
4878 TACAAATTTGTGAGTAAATTT---TATAACTTTACTGAAACAAAAAATATAAATGATGACCAGATACAAGTATTTGTCTTTTTTATGCAG 4964
30 G A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A 59
4965 ATATTTCCTAGAATTATCTTAGTTTCTATTTTAATGATAGATACATTT 5012
60 I A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7886
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
7887 ATTTCAACTACAAAATAAAAAATGATAGATATTATTTCAAGGATAATAAATTTAATAATTAAAAATATACATCGTTTATTTCCCGTATTT 7976
1 M S T E A A K L I G A G C A T I G L A G A G A G - I G T V F 29
7977 GGATTTATATTACTTTCATTA---TATATTTGGGGTAGGTATATAAGAAATAGATTACCACGAGAAATACCTTTTGATTTAACA---TTA 8060
30 G A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A 59
8061 TTACGTTTAATAATGTTAATTATAATATGTAGTAG-TTATATATATAT 8107
60 I A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9907
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
9908 TTAGATTATTTATATATCAAAGATATAAAAATGGAAATATTAGATTTATTTTTATTAAACTTATTTACA---ATAGGATTGATTTTTTCC 9994
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
9995 TTAAGAAATCTTAATATTGGAGCAACCATAAATATTTTC---TTATTTCGACCAAGT---CTTGTA---ATA---TTATCGCAAATTATT 10072
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
10073 TCACTTTGTGTATTAATGTATGTTTTTTACATTTATAACTTAGTT 10117
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9931
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.25
9932 ATAAAAATGGAAATATTAGATTTATTTTTATTAAACTTATTTACAATAGGATTGATTTTTTCCTTAAGAAATCTTAAT---ATT---GGA 10015
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
10016 GCAACCATAAATATTTTCTTATTTCGACCAAGTCTTGTAATATTATCGCAAATTATTTCACTTTGTGTATTAATGTATGTTTTTTACATT 10105
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
10106 TATAACTTAGTTATAAAATACAAATTTTACAAAATTTATTTATTT 10150
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17178
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.09
17179 AGGAGTTTAAAAAAAGTCAATCTTGTTAAAGTAAAAGTTCACACTTAAAATGGTTTGTTAACTAAATTTAATAAATTAAAATGTTTTCAT 17268
1 M S T E A A K L I G A G C A T - I G L A G A G A G I G T V F 29
17269 GTTTCCTTAATAGCATTTATAATTCTTTTTATGTTAGGT---AGACATCTG---GGAAGCAAATTGTCTCGGCTTTGCTATTACAATGTC 17352
30 G A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A 59
17353 ATT---TTA---TCACTTATAATTGTTTATATTATTTTATTCATGTTT 17394
60 I A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 18305
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
18306 ATGGGAGTTTATTTA---AAGATTACCCATAACTTATGTTGCAAT---GCTCTTGCTTCTTTATCTTTA---ATTGGT------TTTCTT 18380
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
18381 TCTTAAGTGGTTTTTATA---GAAGGATTTTCTTCTAGAAGCTACTTACAATATATTTGGTATGTCTCTTATGTTATTTATTTT---ATA 18464
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
18465 TCCATATTTCTACTGCTGTTAGTT---ATTTTACTCTTTCCGATT 18506
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24323
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
24324 ATTTTGGTGGAATGTACTATTCTTGTTACCTTTTACGTCATTCCATTTGGTAAGATTAATTTTACGTTCGC-TTTTATACTTTTTTAAAA 24412
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
24413 ATTATGTTTAATATTATTGCTTATTTAAAAAACAAATTTACTTTCCTATCAGATTTATCAATTTATCAAATTTCAATTATATCATTGGTA 24502
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
24503 CAATTTTATCATACACATTATAATTATAAAATTATAATAAGTTAT 24547
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 31776
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
31777 TTTTGAAAAAAGTTAATCCGTCTTAGCAATTTTCTATGCATTAATGGCCTTGGTTTTGCAGGAGTACCACA-TTACTAGGA---TTTTTT 31862
1 M S T E A A K L I G A G C A T - I G L A G A G A G I G T V F 29
31863 TCTAAATTATTT------ATTTATTATCTGCTTTATATTTTCAGCTTATTTACTTGTGCTGTTTTATTAGCTTTTTCATTAATTAGTAGT 31946
30 G A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A 59
31947 TT-TTATTATTTGCGTTA---GTTAAA---ATGTTATATTTCTCCTTT 31987
60 I A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 33930
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.09
33931 TAT---ACGCAAGCAGTTGCTCTTGTATCTGTGGATTCAATTTATTTTGTATTACAT---GCAAGGAATCTAGTTGATACC---TTTTCG 34011
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
34012 GTTGTGATAAGCTTTTTT---TATTCGGAG---AGGTTCTTTGACTTTGCTTCTTG----CTAAGCGGATTTATATTTAATGTAGTAGGG 34091
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
34092 GATGTGTTTATATTATTATTAGTCATGTTACTATATGGGGTTTTA 34136
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 39193
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
39194 ATGGACAACGATAAGGTTTCA---ATATCCTGC---TGTTGCATTATTACAAA-AAAGGCGTTCCAAGAGGAACA---AAAATATTTGGC 39273
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
39274 CTTTACCTAAAGAATTGCGTGAGAAGGTTATATTCGTTTATGTCTTTGGGTACATCGCTTTATAATGAAATCTCTAGTTTTTCTAAATTT 39363
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F - A L T E A 59
39364 AATAAATTATATATTATCCTGATTTG-CTAATAAATTTATTTTATCGT 39410
60 I A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45983
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.11
45984 TTACCTTCCGAAGCGAAAATATTAATATCTGATGCCCTGGACGAATTAAACGATTCAAAATTG---GCTAAGATTGGGGATAAGAAATAT 46070
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
46071 ACTATACTAAAAAGAGTCCTTAAACGTTTTGAAAGTATACGTACTCGTTTATCGAAAGTTTTAAACGGCTCCGAATTTTCGGATACCATA 46160
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
46161 GCCAATGACACAGGTCATGTTAAGAAATCTATTATGAATTTAATA 46205
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46919
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
46920 ATAGAAGAATACAAGTCTTTTATTCTTGGCTTAAATCCAGAAAAACAAGGTATTGCTATTAATTATTTACAAACCATTATAACTTATCAA 47009
1 M S T E A A K L I G A G C A T I G L A - G A G A G I G T V F 29
47010 CACAGTATGCTTTTAGATACAACACCATCTCCGCATGATATTGAAGTCATATTTGAAAGT---TTAACAACCAAACCTTTAACTACACAA 47096
30 G A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A 59
47097 ACATCTACTATCAAAATAATTATGCTTCCCGTAATTATTGTTTTATTT 47144
60 I A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 50225
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
50226 CGAAATTCCTTGTCGGGTAAGTTCCGACGTGCACGAATGGTAACGACTTCCCTACTGTCTCTAGT-GTAGA-TCCAATGAAATT---GGA 50310
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
50311 ATTATTGTGAAGATACGATATAGAAATAGCCAGACGGAAAGACCCTGTGAACTTTACTATATGCTTTTATTTTTTATTCTTGGGGTAATA 50400
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
50401 TTAAG-TTTATTATGCAAGTTATCGAAATATTCATTTTCATGATA 50444
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61249
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 7 ||| 2 Nt shifts: 0
Score: 117 Length-adjusted: 1.56
61250 TTCTATTTAACTTCTGGTAAAAGTAT-GGTGCTGGTTTAGCAACAAT-GGATTAGCAGGTGCTGGTAC-GGTGTTGGTATTGTTTTTGGT 61336
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
61337 TCTTA-GTTTTTGGTTTAAGCCGTAATCG-GCAGAAGAACAACGCTTATTTAAGTATGCATG-CTTGGGTTTGCTGTAACTGAAGCTGTG 61423
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
61424 GCCTT-TTGGCTTTGATGATGGCTTTTTTGATTCTTTTTGGA--- 61464
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 1660
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.24
1661 ATTTCAATAGGCTCCTCAACAGGTTCTTCAAAAGGTAAATCATTATTAATAACATCCGGTGGATTTACTATTGTAGGTGGTATTGTTTCA 1750
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
1751 GTTTCAATTTCAAATCTAGGGATAATTGTTTCACGTTTAAGATCAATATTAGGT------CTTCTAGGATATTCTATTTTAGGCTCTTTG 1834
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
1835 GATTTAACAGGTATATCTTGCATTTGTACTGGTATCATATCATTA 1879
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 5821
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
5822 TTTTCATCTTTTGCAAGGTATTTAATA---TATAATTCTTCCAGCATTAAATTATCC---ATAAAT------GTTTCTACTATT---TCC 5896
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
5897 TTCATTGTTTGTGAATCTTCAAGACAA---TCCAACTTTTCTAATATATTAAACAAACC-TTCTTTAAGTAT---TTTTCTAAAATTTTC 5979
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
5980 AAAGACTTC---CTGATGATT---TTTTTCATCTGCTTTTACTTT 6018
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 7160
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.07
7161 TTTGGTACAATAATACAAAAATTATTTAAATCATCAAGAGTAATATTTTCTTTGGTGATTTCTAAAGGATTTATAAAAATTTGACTTTTT 7250
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T - V F 29
7251 GGCTGT---AATTCTAAATACGCTCGC---CCGTGT---TTCGTAAATATTAAATCATTATCTTTATTACCAATACGTATATGACCATCA 7331
30 G A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A 59
7332 CTTTCTGTTTCAATAATAACTGCAGGAGATTTTGTTATTTTTATCAAG 7379
60 I A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 7867
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
7868 CTACATATTATAATTAACATTATTAAACGTAATAATGTTAAATCAAAAGGTATTTCT---CGTGGTAATCTATTTCTTATATACCTACCC 7954
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
7955 CAAATATATAATGAAAGTAATATAAATCCAAATACGGGAAATAAACGATGTATATTTTTAATTATTAAATTTATTATCCTTGAAATAATA 8044
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
8045 TCTATCATTTTTTATTTTGTAGTTGAAATAATTGATTTTTCTGTTTTT 8092
61 A L F A L M V V F L L L F - V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 7885
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
7886 ATATATATATAACTACTACATATTATAATTAACATTATTAAACGTAATAATGTTAAATCAAAAGGTATTTCTCGTGGTAATCTATTTCTT 7975
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
7976 ATATACCTACCCCAAATA---TATAATGAAAGTAATATAAATCCAAATACGGGAAATAAACGATGTATATTTTTAATTATTAAATTTATT 8062
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
8063 ATCCTTGAAATAATATCTATCATTTTTTATTTTGTAGTTGAAATA 8107
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 8639
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.15
8640 TTTTGTTGTACATTTGTCCATTTAGTAATTATCTCATGTGTTGTTATAATACTTTTTAATCTAATTATTAAATTAAGATCC---TTTTCG 8726
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
8727 ATAATGGTGTTTTTTATATCTCCACAAGATTTCCAGGTAACATTATATTCTTTAAATAAATTATTATACCATTCTATTGTTGG-ACGTAT 8815
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
8816 AATATAATAAAAATGAGGTGTTTTTTGCTCGTAATATATCTCATC 8860
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 9867
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
9868 ATTAATACACAAAGT---GAAATAATTTGCGATAATATTACAAGACTTGGTCGAAATAAGAAAATATTTATGGTTGCTCCAATATTAAGA 9954
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
9955 TTTCTTAAGGAAAAAATCAATCCTATTGTAAATAAGTTTAATAAAAATAAATCTAATATTTCCATTTTTATATCTTTGATATATAAATAA 10044
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
10045 TCTAATAGTTTAGAAAGCTCTTGTTTTTTATTAATTAGTAGTTTT 10089
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 14227
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.07
14228 TTTAATAGTTTAAATGAAAAACTTTTGCGCTCGATTTTAGATTCAAATTCATAAGACATTTCTGGGTATAAAATTGGTTTAACA---AAA 14314
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
14315 AGATTAGATGTAGTAATACTATCTTCATATTTTTCATTCAAA---CTTAAAGATCTTGGATTATTAGATCCAGCAGTACTCGATTCTTTA 14401
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
14402 AAAATGTTATGTTTTATCAA-ATATTCAATAAGATAAGAACCTAT 14445
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 25965
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.36
25966 ATTACTACTTCATTGGTGTTAATCTTACTTCTTCCCTATGCATTATTAGGTCTTGCAGGAATGCACGCCGTATTCCAGATTATCCTGATG 26055
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
26056 CTATTTACATTTTAATTTAATAGTAGTTATGGTTCTTTTGT-TACTTAGTTTCCACTATCATATTC---TTTATATTTGGTGTGTTTTTA 26141
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
26142 ATTATAATTTATTTATA-ATGGTTTTCCTTCTATATTTTATATAT 26185
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 26448
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
26449 ATGTTGTCTATTGGTATTTGGGTTTTATAGTGTGGGCTCATATATGTA---TACTGTAGGATTGGATGTGGATACGCGCTTATT---TCA 26532
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
26533 CGCTGCTACTATGATATTGCTGTG---CCAACGGTATTAAGATTTTTAGTGGTTAGCAACCTTATTTGGTTCTTATC-TTAAATTACGTA 26618
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
26619 CTCCTTTACTATTC-ATCTTAGGTTTTCTTATTTTGTTTACATTA 26662
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33115
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.05
33116 AAACAAACCATGATAGATCATTTACGTTTTACGCAAAATAAACCTACGGATCTAACTTATTATTTTTATCTTATCAAACTAATGTTTTTT 33205
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
33206 CCAGAAGAATCAGATAGTTATAAAGTACCG---TTATTTACCTCTGAACAAAAGAAGCAAGTAGAAGGTTAT---CTTTCTGAGCATATA 33289
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
33290 AACTTATTTGTAATTCAAGATTTTATTCTAAGTCATTATCAAGTG 33334
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37236
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.13
37237 TCTATTGCACATATGAATTTTTTAGTGGGCTATTTTTGTAAAAGATTTATTAGTTTAACAGGTTCTTTATTA---TTGCAAATGCTCATG 37323
1 M S T E A A K L I G A G C A T - I G L A G A G A G I G T V F 29
37324 GGTTTCTTCTTCCGCTTTATTTTTAGCAATGGAATGTTATATGATGATATA---AATCAC---GTAATA---TTTCTATTATCGTGGTTT 37404
30 G A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A 59
37405 GTTACTGTTATGCCAATATTTTGTTTCTTCTTTTTTATTTTTTCTTTA 37452
60 I A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 38584
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.07
38585 ATGTCAGAATATATAAATGAATTAGTTAAAATAGCTTTTTT-ATAATGATGTCCTTTGCTTTAGCCTTAATTCTTTTAGGTGCTGTTTAT 38673
1 M S T E A A K L I G - A G C A T I G L A G A G A G I G T V F 29
38674 GTTTTAAGTTTTACATCAAAAGTGGATTTGAAAAATCATCTGCTTATGAGTGTGGCTTTCAACCTTTTCTGAGACTAATTATCTTTTGAG 38763
30 G A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A 59
38764 GTACAA---TTTGCTTTGATAGCTATTTTGTTTCTTTTATTTGATATG 38808
60 I A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 46549
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.20
46550 ATATATGCAATATGAGTAGGATTGAGTATTGAAGGCATTTGAGTTACTGGAATCGCTGGTGTT---GCTCCTGTATACTTAGTAAAAAAA 46636
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
46637 TAATATAAGCCAGCAATAAATATAAATATAAGTACGCTTTTTAAAAGATATTTTGTTCCTACGAACAGTTTTAAATTATTTAAA---ATA 46723
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
46724 ---CTCTTTATGTTATTTATCATTTTTTTATATCTAAATGCTTTC 46765
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 51327
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.16
51328 TTATCTTACCAACAACCTAATCTCAC-AAAACCTTACATTCAGCATATAATCTTTTAAATCTAGGATTTCCCTTGACTATGTATTTTCTA 51416
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
51417 TCTTTGCCCTTGTCGCTCGTACGCCACGCTCATATAAGCGTTCGACTACATGTATCAAGTAAGTTGCTAGCATTCTCTCG-AGCCAGGAT 51505
31 A L V T A I A R N P S Q F K Q L Q - S S A L L G F A L T E A 59
51506 CAAACTCATTATTATATTAAAACGTCCTTTTTAAATTTAAGTATTCTA 51553
60 I A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 57765
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
57766 TTAATAAAAAGAAAAGATAAACTT---CAAACGTACTTAACAAAATAATTTATTACAAAGTTTACTATTTTTATATTTACAAGATTTAAA 57852
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
57853 TCTATTTATTACGCTATAATAAGAAACTATTACAAACTCGATAA-TTTTATATAACTATATGCGAAAATTTAATATTCACGATGGCTAAA 57941
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
57942 ATACTTTTATCCCTAATGATCGTAACTGATTGTTCGTTTCTCGGA 57986
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 60324
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.25
60325 TTAGCAAATTTTTCTCTTTACATTATATTTACCTTTTGT------ATT---TTAGCTTTTGTTTTATTACATTTAGCCTTATACATCAAT 60405
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
60406 CTGGTAGTGGTACATCTTCAGGGTGGGGCCGCTCTATTGATGAAATTCTTTTCATCCTTATTATACATTAAAGATTTTTTTAGTGTAATT 60495
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
60496 TTATTTATAGCCATAATTATATTCTTTGTTCTTTTATACCTAATA 60540
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 61189
Protein: lcl|KC353356.1_cdsid_AGH24287.1 [gene=atp9] [protein=ATP synthase F0 subunit c] [protein_id=AGH24287.1] [location=33856..34083] @ 0
DNA length: 450 Protein length: 75
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.08
61190 TACAGCAAACCCAAGCATGCATACTTAAATAAGCGTTGTTCTTCTGCCGATTAC---GGCTTAAACCAAAAACTAAGAACCAAAAACAAT 61276
1 M S T E A A K L I G A G C A T I G L A G A G A G I G T V F G 30
61277 ACCAACACCGTACCAGCACCTGCTAATCCATTGTTGCTAAACCAGCACCATACTTTTACCAGAAGTTAAATAGAATTTACAAAATCTTCT 61366
31 A L V T A I A R N P S Q F K Q L Q S S A L L G F A L T E A I 60
61367 TTAAAGTCATGTTTTAAATTTAACTTTTGGTTTTTGTTTGAGTTT 61411
61 A L F A L M V V F L L L F V F 75
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 408
Protein: lcl|KC353356.1_cdsid_AGH24288.1 [gene=tatC] [protein=Sec-independent protein translocase component TatC] [protein_id=AGH24288.1] [location=complement(34487..35239)] @ 0
DNA length: 1500 Protein length: 250
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 50 Length-adjusted: 0.20
409 ATG---ATAAATATATGTATCATAACG---TTATAT---ATA---TTTACTTTTGTTATAGGTATATTTTATCTTAGATATATAAATATA 486
1 M N I H I P I I T H I N E I R L R F L Y Y I F S I I I T S F 30
487 ACAAAAAAAGTA---GACTTAAAAATTTATTATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAAGAAGAAATTATTTTAAATGTG 573
31 A S Y Y Y K E E I F Y I L S I P L G K N F I Y T D L I E A F 60
574 GTAATAATAATAACTTTT---ATAATAATTTATATTTTTATAATATATAAATTTACTCAATATTTTAAATTACAAGTAATTAAAAGACAT 660
61 I T Y I K L S I L V G I Y F S Y P F F L Y Q L W C F L V P G 90
661 CTTTACTTAATAGGAATACCA---TTAAATAATAATTGGTATTCAACCGTTCATCGAAAGTATTTATGGCCTTTAGCAAATTCTTTTCTT 747
91 L Y L Y E K K I L R I I C I T S T C L F F I G G L I G Y Y I 120
748 AAAATAAGTATAAAACATAAAATTGAGTTATTGTATAAAAAATATTATTTTGATAAAAAGCCTCATAAACCAAGACCTGATAATTTTTTT 837
121 L F P I A F N F F L G F Q K I G Y E K L F T I E L Q A K I Q 150
838 TCT---TTATCTGAAGAGGCAAAAATTTTATTT---TTTAAAAATAATCCTACATTACCTGAATTACTTTTTCATAAATACAAGAAAATG 921
151 E Y L L F N T K L I F S L G I C F Q L P V L I I F L Y Q I N 180
922 TCTATTTTCATAGATAATATTTTAACAAAAGGTCATTATTTTATATTAATTATTAGTATTCTATATGATGTTATAAATAATGATTTTATT 1011
181 P N I Y K W L I N K R R F L Y I F S F I I A A I L S P P D I 210
1012 TTGACTACTATATTTCAAATATTACCTTGGATATTTTTTTATGAACTTTTTCTAAGAATATCTAAATTTGTAGATGACATTTGGATACCA 1101
211 L S Q F V L A T P L I F F F E T S L F L I K I I Q K - Y K K 239
1102 TATGATCAAGCATTACATAATTTGATATATAGT 1134
240 Y M E V I G I E P T A 250
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9574
Protein: lcl|KC353356.1_cdsid_AGH24288.1 [gene=tatC] [protein=Sec-independent protein translocase component TatC] [protein_id=AGH24288.1] [location=complement(34487..35239)] @ 0
DNA length: 1500 Protein length: 250
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 37 Length-adjusted: 0.15
9575 ATGATAATATTTGTTTGCACACTTTCC---ATTTATTACTTATTGAAGAAATATTTCTACAAAACTTTCAAGATAATATTGAACCATTTT 9661
1 M N I H I P I I T H I N E I R L R F L Y Y I F S I I I T S F 30
9662 CTGATCTCTTACTTAAAGATGAAAATG---AAAGTAATAAATTTTATAAACAAAAAATGTTATTAATAAAAGATACTTATAATGTTTAAC 9748
31 A S Y Y Y K E E I F Y I L S I P L G K N F I Y T D L I E A F 60
9749 AAATTATTTTTCATATTACAGATATTAATAAAATTTAAATATTATTTCATGATATTTATTGTTTTAACACTAAGTTTATGTTTTGCAATT 9838
61 I T Y I K L S I L V G I - Y F S Y P F F L Y Q L - W C F L V 88
9839 ATTATACATTATAATTATAATAAAAATAAAAAACTACTAATTAATAAAAAACAAGAGCTTTCTAAACTATTAGATTATTTATATATCAAA 9928
89 P G L Y L Y E K K I L R I I C I T S T C L F F I G G L I G Y 118
9929 GATATAAAAATGGAAATATTAGATTTATTTTTATTAAACTTATTTACAATAGGATTGATTTTTTCCTTAAGAAATCTTAATATTGGAGCA 10018
119 Y I L F P I A F N F F L G F Q K I G - Y E K L F T I E L Q A 147
10019 ACCATAAATATTTTCTTA---TTTCGACCAAGTCTTGTAATA---TTATCGCAAATTATTTCACTTTGTGTATTAATGTATGTTTTTTAC 10102
148 K I Q E Y L L F N T K L I F S L G I C F Q L P V L I I F L Y 177
10103 ATTTATAACTTAGTTATAAAATACAAATTTTACAAAATTTATTTATTTATGTGCCAATTTGAAACTTTTATAAAAATATGTGACATTTTT 10192
178 Q I N P N I Y K W L I N K R R F L Y I F - S F I - I A A I L 205
10193 ACAGGTGGATATCGATTCTATGAACTTTTATACGATAACTTACATGATTTTATTTATATTAAACTAAAACCAATTAATAAAATAAACTCT 10282
206 S P P D I L S Q F V L A T P L I F F F E T S L F L I K I I Q 235
10283 TCTTATTTACAAGTGCTAATGATAATACTATGCAATAAGATCTTG 10327
236 K Y K K Y M E V I G I E P T A 250
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10384
Protein: lcl|KC353356.1_cdsid_AGH24288.1 [gene=tatC] [protein=Sec-independent protein translocase component TatC] [protein_id=AGH24288.1] [location=complement(34487..35239)] @ 0
DNA length: 1500 Protein length: 250
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 36 Length-adjusted: 0.14
10385 ATTTTATTATTTATAAGTTTGATATCTGATTTAAATAATAGAGAAATAAAAACATTTTATTATATCTTAGCTATATACCCATTA---ATG 10471
1 M N I H I P I I T H I N E I R L R F L Y Y I F S I I I T S F 30
10472 ACATCTTATAGGACCATTAAAGAAATTCTAGGAGACTATGATATGTTAAATATAAATGATAAATTAACTACATATTTTTATGAAGATAAA 10561
31 A S Y Y Y K E E I F Y I L S I P L G K N F I Y T D L I E A F 60
10562 ATA---CACGATAAATTGAGAAAAACAATAAGTGAATATGAACGTACTAGAATATTAATACAAAGTATGACTCTTTATTATAAATATGAT 10648
61 I T Y I K L S I L V G I Y F S Y P F F L Y Q L W C F L - V - 88
10649 AAACAGATAAGAGAATATATATTAAGAGATTTCAAAAGAATATATCAGCCATATAGTATGCGTTTAATCTTTTTAGGAATATTAATATTA 10738
89 P G L Y L Y - E K K I L R I I C I T S T C L F F I G G L I G 117
10739 TATTATAAT---TTTTGTTATAGTATGTCATACTAT---AATTGCATGATAATAACAATACCTTTATTATTAAGTTTTATATTATATGAG 10822
118 Y Y I L F P I A F N F F L G F Q K I G Y E K L F T I E L Q A 147
10823 CATAGTTATCAATATTTAGTG---AATTTTAGATATTTATGGATAATAAAAATATTATATTATACTAATTTAATATTGGTAATATATATA 10909
148 K I Q E Y L L F N T K L I F S L G I C F Q L P - V L I I F L 176
10910 TTTATAATAATATATTTGTCAAGGAATACATTATATTTTATAACCGATAATATACATATATTCAATTTTGAACTTATTCAAGAATTTAGC 10999
177 Y Q I N P N I Y K W L I N K R R F L Y I F S F I I A A I L S 206
11000 CAAAAAGAAAAATACGACTTTTTCATAAAATATTTAAATTATACCCTGTATATGGAACGAGAATTTCATTCTATACGTACATCAACCTTT 11089
207 P P D I L S Q F V L A T P L I F F F E T S L F L I K I I Q K 236
11090 TTAAATACAATAATGTCTGATAAAAACTATTATGAAAATTTA 11131
237 Y K K Y M E V I G I E P T A 250
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10595
Protein: lcl|KC353356.1_cdsid_AGH24288.1 [gene=tatC] [protein=Sec-independent protein translocase component TatC] [protein_id=AGH24288.1] [location=complement(34487..35239)] @ 0
DNA length: 1500 Protein length: 250
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.04
10596 ATGAACGTACT-AGAATATTAATACAAAGTATGACT---CTTTATTATAAATATGATAAACAGATAAGAGAATATATATTAAGAGATTTC 10681
1 M N I H I P I I T H I N E I R L R F L Y Y I F S I I I T S F 30
10682 AAAAGAATATATCAGCCATATAGTATG---CGT---TTA---ATCTTTTTAGGAATATTAATATTATATTATAATTTTTGTTATAGTATG 10762
31 A S Y Y Y K E E I F Y I L S I P L G K N F I Y T D L I E A F 60
10763 TCATACTATAATTGCATGATAATAACAATACCTTTATTATTAAGTTTTATATTATATGAGCATAGT---TATCAATATTTAGTGAATTTT 10849
61 I T Y I K L S I L V G I Y F S Y P F F L Y Q L W C F L V P G 90
10850 AGATATTTATGGATAATAAAAATATTATATTATACTAATTTAATATTGGTAATATATATATTTATAATAATATATTTGTCAAGGAATACA 10939
91 L Y L Y E K K I L R I I C I T S T C L F F I G G L I G Y Y I 120
10940 TTATATTTTATAACCGATAATATACATATA---TTCAATTTTGAACTTATTCAAGAATTTAGCCAAAAAGAAAAATACGACTTTTTCATA 11026
121 L F P I A F N F F L G F Q K I G Y E K L F T I E L Q A K I Q 150
11027 AAATATTTAAATTATACCCTGTATATGGAACGAGAATTTCAT---TCTATACGTACATCAACCTTTTTAAATACAATAATGTCT---GAT 11110
151 E Y L L F N T K L I F S L G I C F Q L P V L I I F L Y Q I N 180
11111 AAAAACTATTATGAAAATTTATTATTATCCCTAGATATTAATACAATT---AAAGTATTGGCAAAAGAATTACTTACAATTGCTATTATA 11197
181 P N I Y K W L I N K R R F L Y I F S F I I A A I L S P P D I 210
11198 GTAGAAGATCGTTTTATAGAATTAGATGAAAAGCTAATGATTGAAACTATATCAGAATTGATAGAAGAACTCAGACAA---GAGGAATTA 11284
211 L S Q F V L A T P L I F F F E T S L F L I K I I Q K Y K K Y 240
11285 CAAAGAATTATAGATAAAAATCCAATTACT 11314
241 M E V I G I E P T A 250
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11705
Protein: lcl|KC353356.1_cdsid_AGH24288.1 [gene=tatC] [protein=Sec-independent protein translocase component TatC] [protein_id=AGH24288.1] [location=complement(34487..35239)] @ 0
DNA length: 1500 Protein length: 250
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 30 Length-adjusted: 0.12
11706 TATAGTATT---TTTAAAATAATTATATATGTTTTTTAAATTAAGTATTATTTTTTATTTACGTTATTT---ATATTTAGGTCAAAATTT 11789
1 M N I H I P I I T H I N E I R L R F L Y Y I F S I I I T S F 30
11790 TATGT-TATATAAGTCAGAAAATAGTATTATATATC---TCTCTTCATTTAGT-CGA---TTGTTATTTATGAGCATTTTAATTATAATT 11871
31 A S Y Y Y K E E I F Y I L S I P L G K N F I Y T D L I E A F 60
11872 GTTATTTATAATTTTTATAAACTTTTGGATATTATTTTTTTTGATGAAATTTTAAAACTATAT---CTCTAT---TTTTTTAGG------ 11949
61 I T Y I K L S I L V G I Y F S Y P F F L Y Q L W C F L V P G 90
11950 ---CATAAATTTAATGACAAA---ATGCGACTTTTTGTAATAGCATATTCT---ATAAGAAATATTTGGGGACCTATT---TAT---TTA 12024
91 L Y L Y E K K I L R I I C I T S T C L F F I G G L I G Y Y I 120
12025 TTTTTTGATAGTATATGTAATTTTACACCGATTCCTGATGAATATTATTATGATGATCATTAT---ATA---TATGATTGG---ATTTAT 12105
121 L F P I A F N F F L G F Q K I G Y E K L F T I E L Q A K I Q 150
12106 AATTATACT---TTTGTTACAAAATTATCACTAAATTTATTTATA---TATCAAAACACTTTTATGATACATTTATTTTTTAAATGTAGT 12189
151 E Y L L F N T K L I F S L G I C F Q L P V L I I F L Y Q I N 180
12190 AAGAAAATGTTTCGTTTGTTATATATTCATTTACATTTTGATGCCTTTGGCAAATATTTACATATTTTATTATTAAGTATAGTT---ATT 12276
181 P N I Y K W L I N K R R F L Y I F S F I I A A I L S P P D I 210
12277 ATTTATGAG---ATAATTCATACTAATATGTATTATACTTATTATATG---CTTTTTATTACTTACATAATTAATGTAATATATAAATAT 12360
211 L S Q F V L A T P L I F F F E T S L F L I K I I Q K Y K K Y 240
12361 TAT---ATTTTTGAGAAAAAAAAAGATTTT 12387
241 M E V I G I E P T A 250
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12267
Protein: lcl|KC353356.1_cdsid_AGH24288.1 [gene=tatC] [protein=Sec-independent protein translocase component TatC] [protein_id=AGH24288.1] [location=complement(34487..35239)] @ 0
DNA length: 1500 Protein length: 250
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 35 Length-adjusted: 0.14
12268 ATAGTTATTATTTATGAGATAATT---CATACTAATATGTATTATACTTATTATATGCTTTTTATTACTTACATAATTAATGTAATATAT 12354
1 M N I H I P I I T H I N E I R L R F L Y Y I F S I I I T S F 30
12355 AAATATTATATTTTTGAGAAAAAAAAAGATTTTATGTTTGATGGCTTGCTTAATAAAAATTTT---TATAATGTACAATATTTTATATTT 12441
31 A S Y Y Y K E E I F Y I L S I P L G K N F I Y T D L I E A F 60
12442 GCTAATAAC---AAAAGTACTTTAAACATGAAAACCAATATAGATTATTTATATTTTATGGAAAAATTAAAAGAAGAAACTACTATTAAA 12528
61 I T Y I K L S I L V G I Y F S Y P F F L Y Q L W C F L V P G 90
12529 TATATTTTAAATGATTTTGAACAAGTACCAGAAGAGTTAGTCAATAAACAAATAAATCAAATGTACTTACGTTTTAGTATAATACTAATA 12618
91 L Y L Y E - K K I L R I I C I T S T C L F F I G G L I G Y Y 119
12619 TTACTTTTT---ATGACAATT---TTT---CTT---TATGATGTTATTAGATATTCTATAATAATAAAAATA---CTTAATTACAATATA 12693
120 I L F P I A F N F F L G F Q K I G Y E K L F T I E L Q A K I 149
12694 TATTCTTTTTTTATTCTA---TTGCCATTAATTTTTATATTATATTCAGCAACTAAAATTTTTACTTTGTCTAAT---ACAGCTGAAATT 12777
150 Q E Y L L F N T K L I F S L G I C F Q L P V L I I F L Y Q I 179
12778 GAT---GATTTTACAGAATATGTCTTTAATAAAAAATTCAATAT-TATTTCTTGGATTTTAATATCAATTCATTATTTATATTTTTAATA 12863
180 N P N I Y K W L I N K R R F L Y I F S F I I A A I L S P P D 209
12864 ATATTACAACCAAAATTTATTTTTATGGAAACCGAAATTTTATTTAATCTACCATATAGTATAGTAACTATAACTCAAATATATACTTCT 12953
210 I L S - Q F V - L A T P L I F F F E T S L F L I - K I I Q K 236
12954 CAAGAAAAAATTATGTATTTGTTTCATATTTCGAATACTGTT 12995
237 Y K K Y M E V I G I E P T A 250
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16447
Protein: lcl|KC353356.1_cdsid_AGH24288.1 [gene=tatC] [protein=Sec-independent protein translocase component TatC] [protein_id=AGH24288.1] [location=complement(34487..35239)] @ 0
DNA length: 1500 Protein length: 250
1 Nt shifts: 5 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.07
16448 TATAACTCAGTTTCTGCTTTTATTATACATACAGAGGAAGCCCGATTA---ATGATGTATTTTATATATTCCTCACAACAACTTAATAAA 16534
1 M N I H I P I I T H I N E I R L R F L Y Y I F S I I I T S F 30
16535 GCTTTACACGAAAATTTAGGTATATCTTATTATTATACTCAAAATTATGATTGTTTTGGAATTAATTATAGTTTTATTGT-CTTTTTGAA 16623
31 A S Y - Y Y K E E I F Y I L S I P - L G K N F I Y T D L I E 58
16624 AATTCAGTTAAA---ATTAAATTATA-AAACTTGTT---ATACTCATGAATTAT---TTCCTTCTCTTT---TTAAAATTCTCAATACAA 16700
59 A F I T Y I K L S I L V G I Y F S Y P F F L Y Q L W C F L V 88
16701 CAGATCCTCATTATCTCACATTTGCACAGCTTCTCTTTGATCTTAATAAATCTCCTAACGATGATAATTATTGGG---ATGGTATCATTA 16787
89 P G L Y L Y E K K I L R I I C I T S T C L F F I G G L I G Y 118
16788 CAAGTCCTTATTTTGTTAAATTTTAATTATAGA---GGTTTTTATAAT---AACTTT------GTTTTTTCAATT---ATTAATCTGGGT 16862
119 Y I L F P I A F N F F L G F Q K I G Y E K L F T I E L Q A K 148
16863 ATTTTTGATTCCTTACTATTTCTTTCTCTATTTATACTTCT-ATAGCTATATT-TTG---CTACCTAAA---GTCCCTTTTAAGAGAGGT 16944
149 I Q E Y L L F N T K L I F S L G I C F Q L P V L I I F L Y Q 178
16945 ATTAAGCGGTGCATT---AGTTTTGTTCTCAATAAAAC----TTC---CAAATA---AAATTCGTTATTATAGACATCCTAACACATAGT 17021
179 I N P N I Y K W L I N K R R F L Y I F S F I I A A I L S P P 208
17022 AAAGGT---TCATCTGTTAATCCTAGCAAGCCCTTAAATTCATCT---GAA---AATCTTTATGATTATCCATATTTTCAATATCTTATA 17102
209 D I L S Q F V L A T P L I F F F E T S L F L I K I I Q K Y K 238
17103 ACGGCTAGTGAGGTGTTATATATT---CCAGAAGCT 17135
239 K Y M E V I G I E P T A 250
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32384
Protein: lcl|KC353356.1_cdsid_AGH24288.1 [gene=tatC] [protein=Sec-independent protein translocase component TatC] [protein_id=AGH24288.1] [location=complement(34487..35239)] @ 0
DNA length: 1500 Protein length: 250
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.00
32385 AGTCATTATCAAGTGCCTCCAACAACATTTACGGGTAATTTTCAAATATCCAAACTT------ATTAATAAACCTTTAGACAAGTTTTTT 32468
1 M N I H I P I I T H I N E I R L R F L Y Y I F S I I I T S F 30
32469 GGATCTACCTTATCAAATAATTCTTATTCACTTCTTATCAATTATTTAACAAGTACAACTAAGATTATCTTCTTACATGTTGAAACACTA 32558
31 A S Y Y Y K E E I F Y I L S I P L G K N F I Y T D L I E A F 60
32559 ATTTCTCAAGCCCAGTCCTCTTCACTACGTCCACTCTTAAATCCTTTCCCATCAGTTGAATCTAAAGTTCCCTAATACGAAGTAAAGTTA 32648
61 I T Y I K L S I L V G I Y F S Y P F F L Y Q L W C F L V P G 90
32649 ATCCATTAATAATTTCTCAAGATTCTCAGTGGTGTAGTGCTATTGCGAATATC-TTTTTAAAAGATGCTAATTTGGCAGATTACTTAAAG 32737
91 L Y L Y E K K I L R I I C I T S T C L F F I G G L I G Y Y I 120
32738 ATATTTCCCGTAGGCGCAAAGTATTTAAGTTCCTTTGAACAGAAAACAATATTATTTTTTATTCGCTTAAATGTAATTCATCACGCGACA 32827
121 L F P I A F N F F L G F Q K I G Y E K L F T I E L Q A K I Q 150
32828 GGATTGCTTTCAGATACTTCCAAGTTAATATTTAATGAAAATATTACCAAATATCTCTCCAAAGGTATTCAACCAACAATTTATTGTGAA 32917
151 E Y L L F N T K L I F S L G I C F Q L P V L I I F L Y Q I N 180
32918 CCGGTAATACAAGCATGGCTATCGTTTCCTTCAGATTTAAGAAAGGCATTCATGAATGATGTACAACAAGCTTCTGATCCATCAACGGTA 33007
181 P N I Y K W L I N K R R F L Y I F S F I I A A I L S P P D I 210
33008 ATCCAAGATCCGCTGTATTTAGACTCGATAAAACAATTGGATATTCATCTATCTACATTCTTGCATAATATGCGCAACCAATTCCGCAAT 33097
211 L S Q - F V L A T P L I F F F E T S L F L I K I I Q K Y K K 239
33098 GCGTATACAATCCATAAAAGTAATCTAAATCTG 33130
240 Y M E V I G I E P T A 250
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 36995
Protein: lcl|KC353356.1_cdsid_AGH24288.1 [gene=tatC] [protein=Sec-independent protein translocase component TatC] [protein_id=AGH24288.1] [location=complement(34487..35239)] @ 0
DNA length: 1500 Protein length: 250
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.02
36996 ATTAAGATCAAAATTCCGATGATTCCTTTCCATTTATGGCTTCCTAAAGCCATGTTGAAGCTCCTACTACG-GTAGTGTTTTGTTAGCAG 37084
1 M N I H I P I I T H I N E I R L R F L Y Y I F S I I I T S F 30
37085 GAATCTTTTAAAATTAGGTTCTTAGG-TTTTATACGCTTTCTCTTTTCTTATTCCTAATGCTTCTTTTTATTTCTACCATTAATATTATA 37173
31 A S Y Y Y K E E I F Y I L S I P L G K N F I Y T D L I E A F 60
37174 GTTGCTGTGATATCAATT---ATATTAGCTCTTTTACAGTTTACGTCAAAATGATTT---AAAAAGGATTATTGCTACTCATCTATTGCA 37257
61 I T Y I K L S I L V G I Y F S Y P F F L Y Q L W C F L V P G 90
37258 CATATGAATTTTTTAGTGGGCTATTTTTGTAAAAGATTTATTAGTTTAACAGGTTCTTTATTATTGCAAATGCTCATGGGTTTCTTCTTC 37347
91 L Y L Y E K K I L R I I C I T S T C L F F I G G L I G Y Y I 120
37348 CGCTTT---ATTTTTAGCAATGGAATGTTA---TATGATGATATAAATCACGTA---ATATTTCTATTATCGTGGTTTGTTACTGTTATG 37428
121 L F P I A F N F F L G F Q K I G Y E K L F T I E L Q A K I Q 150
37429 CCAATATTTTGTTTCTTCTTT---TTTATTTTTTCTTTAGCG---AATTTAGGGTTT---CTTCTACTGTTAATTTTATTCTGA---AAT 37506
151 E Y L L F N T K L I F S L G I C F Q L P V L I I F L Y Q I N 180
37507 GTTAATATTTTT---TGGCTTATTTCAAACAGTCC-TTCTATAGCTA-TTTAACTTTAAC---AGGTATTTCTTATCTGCAGTT---ATT 37585
181 P N I Y K W L I N K R R F L Y I F S F I I A A I L S P P D I 210
37586 CTTTTGTTTTACTTACTCGCATGCTTTTGGTCCTGCAAGCCATTTCTTTCTGTTTATATGATTTGACTCGCCGAGAATTTTATATTTTAT 37675
211 L S Q F V L A T P L I F F F E T S L F L I K I I Q K Y K K Y 240
37676 TACTTTAGCTTTTCTTATATTTTCCTAGGA 37705
241 M E V I G I E P T A 250
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53853
Protein: lcl|KC353356.1_cdsid_AGH24290.1 [gene=atp1] [protein=ATP synthase F1 subunit alpha] [protein_id=AGH24290.1] [location=complement(37292..38830)] @ 0
DNA length: 3072 Protein length: 512
1 Nt shifts: 43 ||| 2 Nt shifts: 0
Score: 703 Length-adjusted: 1.37
53854 CTTAAATCCGTATATATTTTAGATGATGAAATTAATCAAGATGTTATTGATAACATTGATGAAAATGAAGAC---CCGTCAAT-GGTCAA 53939
1 M N S T A S E Q F K I L E E R I T N A Y R E L D V E E I G R 30
53940 ATTATTTCTGTAAA-GATGGTGTTGCTTTTGTTACAGGATTGAT-AATATTCAAGTAGGTGAAATGGTAGAATTTATTCT-AAGGGTTT- 54025
31 V I S I G D G I A R V Y G L N N V Q A G E M V E F P K A G I 60
54026 AACGGTATGGCTCTTAATCTAGAAGCTGAACAAGTGGT-TGTATTATTTTTGGTGATGATACTCT-GTTCAACAAGATGATTCTGTCGTG 54113
61 K G M T L N L E T D N V G I V V F G N D R A I A E G D I V R 90
54114 ---CTTTAAATACTTAGTCAAAACCCTGTAGGTTATGGCTTATTAGGTCGTGTTGTGAT-GGTATTGGTAATTT-ATCGATGGTGGTGAA 54198
91 R T G A I V D V P I G K G L L G R V V D A L G N P I D G K G 120
54199 ACTATGCTTTT-GAGGAATATCTCAATGTGAACGTAAAGCT-CCTGGTGTTATACT-CGTGAATCTGTTACTGAACA-ATGTTAACTGGT 54284
121 P I Q S T E R K R V E V K A P G I L E R K S V H E P M S T G 150
54285 TATAAAAT-GTTGATTCTATGTTACCTAT-GGACGTGGTCAAAGGGAACTTATTGTTGGTGATCGTAA-ACAGGTAAAACTACTATTGCT 54371
151 I K A I D C L V P I G R G Q R E L I I G D R Q T G K T A I A 180
54372 ATGAT-ACTATTCTTAATCAACGTTATAC-AATGAA------GAAGAT---ATTGATCT----TATTGTGTGTATGTTGGAATTGGTCAA 54446
181 L D T M L N Q K L I N E S T K N E S E R L Y S I Y V A I G Q 210
54447 AAAAAAAGTTCTATTTGAATATTCAAACTTACTTCAAAATAATAAAGCGCT---CATTATACTACTATTGTTGCTGCAACGCT-GCACAA 54532
211 K R S T V A Q L V Q T L E E Y D A L K Y T I I V A A T A S D 240
54533 AGTGCCTCTCTTCAGTTTATTGCTCCATATACAGGATGTGC-ATTGCTGAATTTTATCGTGATAA-GGTGAACATGC-TTAATTATTTAT 54619
241 P A P L Q F L A P Y S G C T M G E Y F R D N G M H G L I I Y 270
54620 GATGATTTAACAAAACATGCTGCTGCTTATGA-CAATTATCTTTATA-TTAAGACGCCCACCAGGACGTGAAGCTTT-CCAGGTGATGTT 54706
271 D D L S K Q A V A Y R Q T S L L L R R P P G R E A Y P G D V 300
54707 TTTAT-GCTCATTCAGA-CTTTTAGAAAGAGCATGCAAACTTAA-ACTAATTTCGGTGGAGGTTCTTTAACGCT-TTACCTATTGTAGAA 54792
301 F Y L H S R L L E R A A K M S D K E G A G S L T A L P V I E 330
54793 ACACAAGCGGT-GATTTATCTGGTTATATCCA-ACTAATATTATTTCTATTACGAT-GGACAAATTTTCATGGAAAAAGA-TTATTCTTT 54878
331 T Q A G D V S A Y I P T N V I S I T D G Q I F L E T E L F Y 360
54879 AAAGGTAT-CGTCCAGCTGTTAATGTTGGTAGTTCTGTTTCTAGAGTGGT-TCTAAAGCTCAACC-ATAGCTTTACGTTTAGTAACTGGT 54965
361 S G L R P A V S V G L S V S R V G S A A Q V K A M K Q V G G 390
54966 AATCTTCGTTATCAACTTGCTAA-TATCGTGAATATTCTGT-TTTGCACAATTTGATAATGATATGAT-GATGTTACAAGAGGAATTCTT 55052
391 T L K L D L A Q Y R E V A A F A Q F G S D L D A A T L S Q L 420
55053 AATAGAGGTGT-TTATTAACTGAAATTCTTAAACAAGGTCCTAATATGCA-ATGCAATTATATAAACAAGTTTTAATTATTTA-GCTGGT 55139
421 N R G E R L T E L L K Q A Q Y S P I P T E L Q I V I L Y A G 450
55140 GCTTTTAATTTTATTACTCCTTTT---ATA---AAGATTTTAAAAAAGATTTGAGCAATATTGTGCTTTATATGA---AACTAAACT--- 55217
451 V R G Y L N K V S V S K I G E Y E K A L I S F V Q T N H A D 480
55218 ATT---AAG---TTTACACATGATAAACCTGAACGAGCTGAATTATTCTATCATTCTATGAAT---ATT------TAT---CATTCTTTG 55289
481 I L K R I R E E K Q L S K D L D S Q I A N V I S T F T N S F 510
55290 ATAAAG 55295
511 I G 512
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53853
Protein: lcl|KC353356.1_cdsid_AGH24290.1 [gene=atp1] [protein=ATP synthase F1 subunit alpha] [protein_id=AGH24290.1] [location=complement(37292..38830)] @ 0
DNA length: 3072 Protein length: 512
1 Nt shifts: 43 ||| 2 Nt shifts: 0
Score: 728 Length-adjusted: 1.42
53854 CTTAAATCCGTATATATTTTAGATGATGAAATTAATCAAGATGTTATTGATAACATTGATGAAAATGAAGAC---CCGTCAAT-GGTCAA 53939
1 M N S T A S E Q F K I L E E R I T N A Y R E L D V E E I G R 30
53940 ATTATTTCTGTAAA-GATGGTGTTGCTTTTGTTACAGGATTGAT-AATATTCAAGTAGGTGAAATGGTAGAATTTATTCT-AAGGGTTT- 54025
31 V I S I G D G I A R V Y G L N N V Q A G E M V E F P K A G I 60
54026 AACGGTATGGCTCTTAATCTAGAAGCTGAACAAGTGGT-TGTATTATTTTTGGTGATGATACTCT-GTTCAACAAGATGATTCTGTCGTG 54113
61 K G M T L N L E T D N V G I V V F G N D R A I A E G D I V R 90
54114 ---CTTTAAATACTTAGTCAAAACCCTGTAGGTTATGGCTTATTAGGTCGTGTTGTGAT-GGTATTGGTAATTT-ATCGATGGTGGTGAA 54198
91 R T G A I V D V P I G K G L L G R V V D A L G N P I D G K G 120
54199 ACTATGCTTTT-GAGGAATATCTCAATGTGAACGTAAAGCT-CCTGGTGTTATACT-CGTGAATCTGTTACTGAACA-ATGTTAACTGGT 54284
121 P I Q S T E R K R V E V K A P G I L E R K S V H E P M S T G 150
54285 TATAAAAT-GTTGATTCTATGTTACCTAT-GGACGTGGTCAAAGGGAACTTATTGTTGGTGATCGTAA-ACAGGTAAAACTACTATTGCT 54371
151 I K A I D C L V P I G R G Q R E L I I G D R Q T G K T A I A 180
54372 ATGAT-ACTATTCTTAATCAACGTTATAC-AATGAA------GAAGAT---ATTGATCT----TATTGTGTGTATGTTGGAATTGGTCAA 54446
181 L D T M L N Q K L I N E S T K N E S E R L Y S I Y V A I G Q 210
54447 AAAAAAAGTTCTATTTGAATATTCAAACTTACTTCAAAATAATAAAGCGCT---CATTATACTACTATTGTTGCTGCAACGCT-GCACAA 54532
211 K R S T V A Q L V Q T L E E Y D A L K Y T I I V A A T A S D 240
54533 AGTGCCTCTCTTCAGTTTATTGCTCCATATACAGGATGTGC-ATTGCTGAATTTTATCGTGATAA-GGTGAACATGC-TTAATTATTTAT 54619
241 P A P L Q F L A P Y S G C T M G E Y F R D N G M H G L I I Y 270
54620 GATGATTTAACAAAACATGCTGCTGCTTATGA-CAATTATCTTTATA-TTAAGACGCCCACCAGGACGTGAAGCTTT-CCAGGTGATGTT 54706
271 D D L S K Q A V A Y R Q T S L L L R R P P G R E A Y P G D V 300
54707 TTTAT-GCTCATTCAGA-CTTTTAGAAAGAGCATGCAAACTTAA-ACTAATTTCGGTGGAGGTTCTTTAACGCT-TTACCTATTGTAGAA 54792
301 F Y L H S R L L E R A A K M S D K E G A G S L T A L P V I E 330
54793 ACACAAGCGGT-GATTTATCTGGTTATATCCA-ACTAATATTATTTCTATTACGAT-GGACAAATTTTCATGGAAAAAGA-TTATTCTTT 54878
331 T Q A G D V S A Y I P T N V I S I T D G Q I F L E T E L F Y 360
54879 AAAGGTAT-CGTCCAGCTGTTAATGTTGGTAGTTCTGTTTCTAGAGTGGT-TCTAAAGCTCAACC-ATAGCTTTACGTTTAGTAACTGGT 54965
361 S G L R P A V S V G L S V S R V G S A A Q V K A M K Q V G G 390
54966 AATCTTCGTTATCAACTTGCTAA-TATCGTGAATATTCTGT-TTTGCACAATTTGATAATGATATGAT-GATGTTACAAGAGGAATTCTT 55052
391 T L K L D L A Q Y R E V A A F A Q F G S D L D A A T L S Q L 420
55053 AATAGAGGTGT-TTATTAACTGAAATTCTTAAACAAGGTCCTAATATGCA-ATGCAATTATATAAACAAGTTTTAATTATTTA-GCTGGT 55139
421 N R G E R L T E L L K Q A Q Y S P I P T E L Q I V I L Y A G 450
55140 GCTTTTAATTTTATTACTCCTTTT---ATA---AAGATTTTAAAAAAGATTTGAGCAATATTGTGCTTTATATGA---AACTAAACT--- 55217
451 V R G Y L N K V S V S K I G E Y E K A L I S F V Q T N H A D 480
55218 ATT---AAG---TTTACACATGATAAACCTGAACGAGCTGAATTATTCTATCATTCTATGAATATTTATCATTCTTTGATAAAGCCGATT 55301
481 I L K R I R E E K Q L S K D L D S Q I A N V I S T F T N S F 510
55302 TTGGAT 55307
511 I G 512
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7946
Protein: lcl|KC353356.1_cdsid_AGH24291.1 [gene=nad6] [protein=NADH dehydrogenase subunit 6] [protein_id=AGH24291.1] [location=complement(39108..39725)] @ 0
DNA length: 1230 Protein length: 205
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.03
7947 AAAAATATACATCGTTTATTTCCCGTATTTGGATTTATATTACTTTCATTATATATTTGGGGTAGGTATATAAGAAATAGATTACCACGA 8036
1 M T I E I L F Y F F S F L A L S S A T F V I A S S N S I H S 30
8037 GAAATACCTTTTGATTTAACATTATTACGTTTA---ATAATGTTAATTATAATATGTAGTAGTTATATATATATAATTTATAGGCTTATT 8123
31 V L F L V L V F C T T S A L L I L I E A E F I A M V F I M V 60
8124 AAA---CCTAAAGTACCACCTCAATTTATACTTAATGTT------TTG---GTATCTATTATAAATACTGTAAAATCTTTTGACAATTAT 8201
61 Y V G A I A V L F L F V V M M L N V R L V Q F N T S M L K Y 90
8202 ACGAAACAATTTAATCTTATTTCCAATACCTATATA---AAAATATTTACCTATATA---GCAAATAAAATTAATTATTATAATGTCATT 8285
91 L P L G G V I G L I F L L E L F L I I D S D L I P L F G L N 120
8286 TTATGGGAAAAAATCTTACTTATTATAAATACTGTACCGCATATCATTTTACTTTCTGCTCTATTC---ATAGATACTTTTTATTTAGGT 8372
121 I - E Q N T T V F Q W A D K I N A V T N V E A I G K I L Y T 149
8373 AAATTATTTTATTTTTATAAAGTCATTTGGGTTACATTATTCTTTTTCTTAATC---CCATTTAGTTTATATTCTTTTGACTATGTTTGT 8459
150 H Y F Y L F L L A G M I L L V A M I G A I V L T M Y K R V G 179
8460 GAACACTATATAAATTATTGGGAAAAAAATTCTGAAAATGTATGGACAACATATAAA---CCAAATGTCTTACCTCCT 8534
180 V R R Q D I N E Q L S R D F K E T I R L T S P I K K 205
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9601
Protein: lcl|KC353356.1_cdsid_AGH24291.1 [gene=nad6] [protein=NADH dehydrogenase subunit 6] [protein_id=AGH24291.1] [location=complement(39108..39725)] @ 0
DNA length: 1230 Protein length: 205
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.01
9602 ATTTATTACTTATTGAAGAAATATTTCTACAAAACTTTCAAGATAATATTGAACCATTTTCTGATCTCTTACTTAAAGATGAAAATGAAA 9691
1 M T I E I L F Y F F S F L A L S S A T F V I A S S N S I H S 30
9692 GTAATAAATTTTATAAACAAAAAATGTTATTAATAAAAGATACTTATAATGTTTAACAAATTATTTTTCATATTACAGATATTAATAAAA 9781
31 V L F L V L V F C T T S A L L I L I E A E F I A M V F I M V 60
9782 TTTAAATATTATTTCATGATATTTATTGTTTTAACACTAAGTTTATGTTTTGCAATTATTATACATTATAATTATAATAAAAATAAAAAA 9871
61 Y V G A I A V L F L F V V M M L N V R L V Q F N T S M L K Y 90
9872 CTACTAATTAATAAAAAACAAGAGCTTTCTAAACTATTAGAT---TATTTATATATC---AAAGAT---ATAAAAATGGAAATATTAGAT 9952
91 L P L G G V I G L I F L L E L F L I I D S D L I P L F G L N 120
9953 TTATTTTTA---TTAAACTTATTTACA---ATAGGATTGATTTTTTCCTTAAGAAATCTTAAT---ATTGGAGCAACCATA------AAT 10027
121 I E Q N T T V F Q W A D K I N A V T N V E A I G K I L Y T H 150
10028 ATTTTC---TTATTTCGA---CCAAGTCTTGTAATATTATCGCAAATTATTTCACTTTGTGTATTA---ATGTATGTTTTTTAC---ATT 10105
151 Y F Y L F L L A G M I L L V A M I G A I V L T M Y K R V G V 180
10106 TATAACTTAGTTATAAAATACAAATTTTACAAAATTTATTTATTTATGTGCCAATTTGAAACTTTTATAAAAATA 10180
181 R R Q D I N E Q L S R D F K E T I R L T S P I K K 205
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10699
Protein: lcl|KC353356.1_cdsid_AGH24291.1 [gene=nad6] [protein=NADH dehydrogenase subunit 6] [protein_id=AGH24291.1] [location=complement(39108..39725)] @ 0
DNA length: 1230 Protein length: 205
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.11
10700 TATAGTATGCGTTTAATCTTTTTAGGAATATTAATATTATATTATAATTTTTGT---TATAGTATGTCATACTATAATTGCATGATAATA 10786
1 M T I E I L F Y F F S F L A L S S A T F V I A S S N S I H S 30
10787 ACAATACCTTTATTATTAAGTTTTATATTATATGAGCATAGTTATCAATATTTAGTGAATTTTAGATATTTATGGATAATAAAAATATTA 10876
31 V L F L V L V F C T - T S A L L I L I E A E F I A M V F I M 59
10877 TATTATACTAATTTAATATTGGTAATATATATATTTATAATAATATATTTGTCAAGGAATACATTATATTTTATAACCGATAATATACAT 10966
60 V Y V G A I A V L F L F V V M M L N V R L V Q F N T S M L K 89
10967 ATATTCAATTTTGAACTTATTCAAGAATTTAGCCAAAAAGAAAAATACGACTTTTTCATAAAATATTTAAATTATACCCTGTATATGGAA 11056
90 Y L P L G G V I G L I F L L E L F L I I D S D L I P L F G L 119
11057 CGAGAATTTCATTCTATACGTACATCAACCTTTTTAAATACAATAATGTCTGATAAAAACTATTATGAA---AATTTATTATTATCCCTA 11143
120 N I E Q N T T V F Q W A D K I N A V T N V E A I G K I L Y T 149
11144 GATATTAATACAATTAAAGTATTGGCAAAAGAATTACTTACAATTGCTATTATAGTAGAAGATCGTTTTATAGAATTAGATGAAAAGCTA 11233
150 H Y F Y L F L L A G M I L L V A M I - G A I V L T M Y K R V 178
11234 ATGATTGAAACTATATCAGAATTGATAGAAGAACTCAGACAAGAGGAATTACAAAGAATTATAGATAAAAATCCAATTACTAAA 11317
179 G V R R - Q D I N E Q L S R D F K E T I R L T S P I K K 205
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11736
Protein: lcl|KC353356.1_cdsid_AGH24291.1 [gene=nad6] [protein=NADH dehydrogenase subunit 6] [protein_id=AGH24291.1] [location=complement(39108..39725)] @ 0
DNA length: 1230 Protein length: 205
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.03
11737 TTTAAATTAAGTATTATTTTTTATTTA---CGTTATTTATATTTAGGTCAAAATTTTATGTTATATAAGTCAGAAAATAGTATTATATAT 11823
1 M T I E I L F Y F F S F L A L S S A T F V I A S S N S - I H 29
11824 CTCTCTTCATTTAGTCGATTGTTATTT---ATG---AGCATTTTAATTATAATTGTTATTTATAATTTTTATAAACTTTTGGATATTATT 11907
30 S V L F L V L V F C T T S A L L I L I E A E F I A M V F I M 59
11908 TTTTTTGATGAAATTTTAAAACTATATCTCTATTTTTTTAGGCATAAATTTAATGACAAAATGCGACTTTTT---------GTAATAGCA 11988
60 V Y V G A I A V L F L F V V M M L N V R L V Q F N T S M L K 89
11989 TAT---TCTATAAGAAATATTTGGGGACCTATTTATTTATTT------TTTGATAGTATA---TGTAATTTTACACCGATTCCTGATGAA 12066
90 Y L P L G G V I G L I F L L E L F L I I D S D L I P L F G L 119
12067 TATTATTATGATGATCATTATATATATGATTGGATTTATAATTATACTTTTGTTACAAAATTA---TCACTAAATTTATTTATATATCAA 12153
120 N I E Q N T T V F Q W A D K I N A V T N V E A I G K I L Y T 149
12154 AACACTTTTATGATACATTTATTTTTTAAATGTAGTAAGAAAATGTTTCGTTTGTTATATATTCATTTA---CATTTTGATGCCTTTGGC 12240
150 H Y F Y L F L L A G M I L L V A M I G A I V L T M Y K R V G 179
12241 ---AAATATTTACATATT---TTATTATTAAGTATAGTTATTATTTATGAGATAATTCATACTAATATGTATTATACT 12312
180 V R R Q D I N E Q L S R D F K E T I R L T S P I K K 205
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12688
Protein: lcl|KC353356.1_cdsid_AGH24291.1 [gene=nad6] [protein=NADH dehydrogenase subunit 6] [protein_id=AGH24291.1] [location=complement(39108..39725)] @ 0
DNA length: 1230 Protein length: 205
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.04
12689 ATATATATTCTTTTTTTATTCTATTGCCATTA-ATTTTTATATTATATTCAGCAACTAAAATTTTTACTTTGTCTAATACAGCTGAAATT 12777
1 M T I E I L F Y F F S F L A L S S A T F V I A S S N S I H S 30
12778 GATGATTTTACAGAATATGTCTTTAATAAAAAATTCAATATTATTTC-TTG---GATTTTAAT---ATCAATTCATTATTTATATTTTTA 12860
31 V L F L V L V F C T T S A L L I L I E A E F I A M V F I M V 60
12861 ATAATATTACAACCAAAATTTATTTTTATGGAAACCGAAATTTTATTTAATCTACCATATAGTATAGTAACTATAACTCAAATA---TAT 12947
61 Y V G A I A V L F L F V V M M L N V R L V Q F N T S M L K Y 90
12948 ACTTCTCAAGAAAAAATTATGTATTTGTTTCATATTTC-GAATACTGTTTGTTTATT---ATTAATATG---GATATA---AATATGAAA 13027
91 L P L G G V I G L I F L L E L F L I I D S D L I P L F G L N 120
13028 ---GAAAATTTAACTTATATCATAAGACAAATAGACTTTGAATATTTAATAACTGATTATATTAAACTT---AAAGATTTAAAAATT--- 13108
121 I E Q N T T V F Q W A D K I N A V T N V E A I G K I L Y T H 150
13109 TATGTATATATGTTTATA---GAAAATTATGTCTATTTAGAACTTTGTATCAATATTTTTATAACAAA-ATAATAACAGAAGTT---GTA 13191
151 Y F Y L F L L A G M I L L V A M I G A I V L T M Y K R V G V 180
13192 CAAGAATTTTCTTTATTGCATCAGTTATATTATTTTATGCGAAATAGTATTGTAATATTAAGTGTTATCCAAACT 13266
181 R R Q D I N E Q L S R D F K E T I R L T S P I K K 205
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 36975
Protein: lcl|KC353356.1_cdsid_AGH24291.1 [gene=nad6] [protein=NADH dehydrogenase subunit 6] [protein_id=AGH24291.1] [location=complement(39108..39725)] @ 0
DNA length: 1230 Protein length: 205
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
36976 TATACGCTTTCT---CTTTTCTTATTCCTAATGCTTCTTTTTATTTCTACCATTAATATTATAGTTGCTGTGATATCAATTATATTAGCT 37062
1 M T I E I L F Y F F S F L A L S S A T F V I A S S N S I H S 30
37063 CTTTTACAGTTTACGTCAAAATGATTTAAAAAGGATTATTGCTACTCATCTATTGCACATATGAATTTTTTAGTGGGCTATTTTTGTAAA 37152
31 V L - F L V L V F C T T S A L L I L I E A E F I A M V F I M 59
37153 AGATTTATTAGTTTAACAGGTTCTTTATTATTGCAAATGCTCATGGGTTTCTTCTTCCGCTTTATT---TTTAGCAATGGAATGTTA--- 37236
60 V Y V G A I A V L F L F V V M M L N V R L V Q F N T S M L K 89
37237 TATGATGATATAAATCACGTAATATTTCTATTATCGTGGTTTGTTACTGTTATGCCAATATTTTGTTTCTTCTTTTTTATTTTTTCTTTA 37326
90 Y L P L G G V I G L I F L L E L F L I I D S D L I P L F G L 119
37327 GCGAATTTAGGGTTTCTTCTACTGTTAATTTTATTCTGAAATGTTAATATTTTTTGGCTTATTTCAAACAGTCCTTCTATAGCTATTTAA 37416
120 N I E Q N T T V F Q W A D K I N A V T N V E A I G K I L Y - 148
37417 CTTTAACAGGTATTTCTTATCTGCAGTTATTCTTTTGTTTTACTTACTCGCATGCTTTTGGTCCTGCAAGCCATTTCTTTCTGTTTATAT 37506
149 T H Y F Y L F L L A G M I L L V A M I G A I V L T M Y K R V 178
37507 GATTTGACTCGCCGAGAATTTTATATTTTATTACTTTAGCTTTTCTTATATTTTCCTAGGATTATTTCCTATTATTTGACT 37587
179 G V R R Q D I N E Q L S R D F K E T I R L T S P I K K 205
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 56174
Protein: lcl|KC353356.1_cdsid_AGH24291.1 [gene=nad6] [protein=NADH dehydrogenase subunit 6] [protein_id=AGH24291.1] [location=complement(39108..39725)] @ 0
DNA length: 1230 Protein length: 205
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 35 Length-adjusted: 0.17
56175 ATAACCTTTTCTTTATTCGAATATGCTTTTAAGTTTATATTTTTCTCTTATTAT---TATATATACAGTAACACCAAATGCTATCATGCA 56261
1 M T I E I L F Y F F S F L A L S S A T F V I A S S N S I H S 30
56262 TTATTAGCTTTAATTTTATTATTC---ATAACTTCTCATTTCTATTATTTTTAACGATTCAGCTTTCTTAGGATTGCTTATATTTTAGTT 56348
31 V L F L V L V F C T T S A L L I L I E A E F I A M V F I M V 60
56349 TATAT-GGTGCTATTTGTGTACTATTT---TTTATATAATATTACTTCACATTTACGCTCATACACGCTTATGCAACGTCAAAATTCCAT 56434
61 Y V G A I A V L F L F V V M M L N V R L V Q - F N T S M L K 89
56435 TTTATTATTATTTTAATTTTTATATTTTTAATATA-ATGACTTTTTTATTTAGCGATACAATCTCGAGATTGTATTTTCTCTAATTATCT 56523
90 Y L P L G G V I G L I F L L E L F L I I D S D L I P L - F G 118
56524 TTTAAATGATTAGAACTTTTTACCTCATATTCTTTAAAACACACAACATTATATGTTTTTAAGTATTTTTCTTTTATTATTGCATTATTC 56613
119 L N I E Q N T T V F Q W A D K I N A V T N V E A I G K I L Y 148
56614 TTATTGTATTTTTATCTACTAAATTTGTCGGATATAATAAAACAACTGCTATAATTTTATAATATGAATAATAA-ACATCATATCATTTA 56702
149 T H Y F Y L F L L A G M I - L L V A M I G A I V L T M Y K R 177
56703 GTA---ATCCATCCCCATGGCCTATATTGT---TTCAGCAGCTTTATTAGGATTAACTATGGAGGTGTTTCTTATTTTCACTCT 56780
178 V G V R R Q D I N E Q L S R D F K E T I R L T S P I K K 205
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 27673
Protein: lcl|KC353356.1_cdsid_AGH24292.1 [gene=nad7] [protein=NADH dehydrogenase subunit 7] [protein_id=AGH24292.1] [location=complement(39755..40945)] @ 0
DNA length: 2376 Protein length: 396
1 Nt shifts: 34 ||| 2 Nt shifts: 0
Score: 744 Length-adjusted: 1.88
27674 AAAGATTTACGAATATATTTATGCCATATTAAAAAACTATTAATTAATTTTGGACCACAACATCA-GCAGCACATGGTGTTTTAAGAATG 27762
1 M Q Q K A L T K K L K N F T M N F G P Q H P A A H G V L R L 30
27763 GTGTTGAA-TTAAATGGTGAGGTATACAG-AATTGCGATCCACATAT-GGGCTTCTACATGA-GGTACTGAAAAACTTATAGAACATAAG 27848
31 V L E L N G E V V T R A D P H I G L L H R G T E K L I E Y K 60
27849 AATTTCTTACAATCTTC-CT-TATTTTGATGT-CTTGATTATGTATCATG-ATGGCACAAGAACATGCTAT-TCTTTAGCTGTAGAAAAT 27933
61 T Y L Q A L P Y F D R L D Y V S M M A Q E H A Y S L A V E K 90
27934 TTATTAATGATTTATGTGCTAAAGCATTATACCTTATATAGATATACAGAAAGGGCTCGCTATATTCGTGTCTG-TTTTTAGAAATTACT 28022
91 L L G C E V P K - - - - - R - A - - A - Y I R V L F C E I T 111
28023 AGAATTTTAAATCATTTATTAGCTGTACG-ACACATGCTATGGATGTTGGTGCCTTAACACCATTTCTGGG-CT-TTTGAAGAGCGAGAA 28109
112 R I L N H L L A V T T H A L D V G A M T P F L W A F E E R E 141
28110 AAATTGATGAA-TTTTATGAACGTGTATCGGT-GCAAGAATGCATACAGCATACATTCGACCAGGAGGAGTAGCATATGATGC-CT-ATT 28195
142 K L M E F Y E R V S G A R M H A A Y I R P G G V S Q D I P M 171
28196 GGTTTATTAAATGATATTATGAATTTTTAA---CACTTTCTCTAAAAAGTTAAATGAATGGAAGAATTACTAACAGATAATCGAATATTT 28282
172 G L C E D I Y K F A K Q F G S R I D E M E D V L S S N R I W 201
28283 AAAGATCGT---TGTAAATATAGGAAAAGTTACATAGATGTTGCTAAAGATAT-GCTTTTTCTGGTGTTATGGTTCGAGGTAG-GGTATA 28367
202 K Q R L V D I G T V T A D E A L D W G F S G V M L R G S G I 231
28368 CCTTATGATTC-CGTAAAATTTATAATTATGAAAATTATAA-GAATTTAATTTTAAAATACCTGTAGGTTTGAAGGA-GATTGTTATGAC 28454
232 A W D L R K T Q P Y D V Y D E L E F D V P V G T K G D C Y D 261
28455 CGTTTTATGATTAGGGTTACTGAAATGAGAGAAAGTTGCTCCATAATTGCTCAAGTTTGTGAACGAATTACAGATGGTTTTATAACTGTT 28544
262 R Y L I R M E E M R Q S L R L V M Q C L N K M P T G I I K V 291
28545 CCT---TGCTAAATTTGTTAACCAACTCGTTCTGATATGAAACATTT-ATGGAAGCTTTGATCAACAT-TTTAAATTTTTCTCTAA-GGT 28628
292 D D K K I S P P S R V D M K D S M E S L I H H F K L Y T E G 321
28629 ATTATAGTTCCTGAAGC-TATATGTATACAAGTGTGAAGCTCCAAAAGGAGAATTGGTACTTTAATTGCGTCTTACAAAATAATACCAAA 28717
322 Y S V P I G E T Y T A V E A P K G E F G V Y L V S D G T S R 351
28718 CCTTATGT-TGTCATATACGTGT-CCAGGATTTCATCATTA-GCTGCTATTAATGAGTT-TCTCAAAATCATTCTTTAGCTGATGTGTTG 28803
352 P Y R C K I K A P G F S H L Q G L D F M S K G H M I A D V V 381
28804 CC-ATTAT-GGTACTCTTGATATTGTCTT-GGTGAAGTTGATAGA 28845
382 T I I G T Q D I V F G E V D R 396
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1268
Protein: lcl|KC353356.1_cdsid_AGH24293.1 [gene=nad9] [protein=NADH dehydrogenase subunit 9] [protein_id=AGH24293.1] [location=complement(40987..41604)] @ 0
DNA length: 1230 Protein length: 205
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.03
1269 ATGAAAAATATAATA---AATAAAATACGATATATATATATTATACTATTACTTAAATTATTATATAATCCTATAATATTTTTTCTGATA 1355
1 M N N K I Q N Q A L K E F G I S L I K - M F P K Y I E K A I 29
1356 TATTATGTAATAATAATAGGTATACAAATATTATGGTCATATTATATGCAT---GTAGAAGTTATCAAAGATAATGATAATAATTTATTA 1442
30 Y S K G E L T V T V K P T H L I Q F M K I I K N H T N C Q F 59
1443 AAAACATTGCCTTCAATAAAGATTATT---CATAATTATTTTCTGTATAAAAGTAGTTATTTATATGAAGCTGGTTCAATATGTAAATCT 1529
60 K S L S D L C A V D Y P E R K E R F E I V Y N L L S V - R Y 88
1530 TTATATAAAATAATGCCGACAACTAAATATTCGGTAGTTAAAGATATTATTTTGGTGAAATATAGTTTAGATACTTCAGCTGATTATCAA 1619
89 N A R L R V K T N V D E L T P V P S I T P L F N A A G W F E 118
1620 ---CCTTCTCAAGAT---GAAGCCTCATATTTCCCTTCTGAT---GATATTAATGATATGATACCA---GTACAAATGCAAGATATACCT 1697
119 R E V W D L Y G V Y F T N H P D L R R I L T D Y G F E G H P 148
1698 GTTAAATCCAAAGAGCCTAAAATAGAATATCCTAGAAGACCTAATATTGATCTTAAACGTGAAACAATTATCCCTAGATTTGAAATTGAA 1787
149 M R K D F P L T G Y V E V R Y D D E Q K R V V T E P L E M T 178
1788 ACTGAAACAATACCACCTACAATAGTAAATCCACCGGATGTTATTAATAATGATTTACCTTTTGAAGAACCTGTTGAGGAG 1868
179 Q E F R Y F N F T S P W E Q I E I S K P N I K D N K K 205
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2875
Protein: lcl|KC353356.1_cdsid_AGH24293.1 [gene=nad9] [protein=NADH dehydrogenase subunit 9] [protein_id=AGH24293.1] [location=complement(40987..41604)] @ 0
DNA length: 1230 Protein length: 205
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.02
2876 TTAGAAAAAATAATTAAAGATTTGAAAATAGCTATACAGGAAAAATCTTTGAATAAAGAACAAGTAAAAAGCATTATTGATGATATTCGT 2965
1 M N N K I Q N Q A L K E F G I S L I K M F P K Y I E K A I Y 30
2966 ---AAAAATTATGTTACTAAAGGGGTTAGTATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAGTCTTAT---GATTTTCAATATGAA 3049
31 S K G E L T V T V K P T H L I Q F M K I I K N H T N C Q F K 60
3050 CCTTTAAAACAAATTTGTAAAATTAAAAAAGATATTATTATAAATAAA---GAACAAGAAAAAATTGTTATAGATTCTAAATCATCTTAT 3136
61 S L S D L C A V D Y P E R K E R F E I V Y N L L S V R Y N A 90
3137 GAAGAAAAATTGAAA---AATTTAGAAGAA---AAA---ATG---TCAATAGCT---CTTAAAAATATAAATAATTTTCTTGAAAAAAAT 3211
91 R L R V K T N V D E L T P V P S I T P L F N A A G W F E R E 120
3212 AAA---GAT---TATACTAAAGAATTTCTTGAAGCAAAAGAATTACAAGAATGGTAT---GATTAT---TTTCAGAATAGAGGAGCATTA 3289
121 V W D L Y G V Y F T N H P D L R R I L T D Y G F E G H P M R 150
3290 AAAAAATTATCA---AAACAAGAAAAAGAAGTTTATGATAAATTATTAGAAATAAAAAATAAATATTTACCTAGCGAAAAAGATTTTCAA 3376
151 K D F P L T G Y V E V R Y D D E Q K R V V T E P L E M T Q E 180
3377 GAAAAAAATAGTAGTTATTTGACACCTCTGAAAAAAAATAGTGCTTTACCTATTAATTTACAAAATGAAAAATCA 3451
181 F R Y F N F T S P W E Q I E I S K P N I K D N K K 205
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 41463
Protein: lcl|KC353356.1_cdsid_AGH24293.1 [gene=nad9] [protein=NADH dehydrogenase subunit 9] [protein_id=AGH24293.1] [location=complement(40987..41604)] @ 0
DNA length: 1230 Protein length: 205
1 Nt shifts: 11 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
41464 AAAAGCCGTAGATCTAGACAAGAATTTATTAAACATCAAAGACTTAAATC-ATAATTATGTTTATAATAAAGATCAAT---ATTTTATTT 41549
1 M N N K I Q N Q A L K E F G I S L I K M F P K Y I E K A I Y 30
41550 ATTATTAATAAATCTTTAGTATCCATTAAACTTTATGCAATGATATTCTATTAAACCTAAGAATTTGTTAGA---TATGTTAATTT-TCT 41635
31 S K G E L T V T V K P T H L I Q F - M - K I I K N H T N C Q 58
41636 AAAAAAAAATACATATTATTAATTACAGCTAC-GCTATTGATCAAATAAATAAATTTAACGTTTTTTATTATATATGTCTTTGTACTTAT 41724
59 F K S L S D L C A V D Y P E R K E R F E I V Y N L L S V R Y 88
41725 ACAAAAGCACAGCATATTATTTAACATATAATACAATTTAACAACACCATT---ATAATTGATTTATTTCCATCAGCATT-TGGCTTGAA 41810
89 N A R L R V K T N V D E L T P V P S I T P L F N A A G W F E 118
41811 CGTGAAATTAC-GATTTATTTGGTATATTTTTTTCTAATAGAACAATACT-AATGATTT-CGTCGAATATTAACTGATTATAT-TTCAAA 41896
119 R E V W D L Y G V Y F T N H - - P - D L R R I L T D Y G F E 145
41897 GGACATCT-TTACGTAAGGATTTTTCTTA-ATAGGGTATCAAGAAAAAGTGTTTTCCTATTTACAAAGACCATTCGGAGTAAGATGAAGT 41984
146 G H P M R K D F P L T G Y V E V R Y D D E Q K R V - V - - T 172
41985 AATTTTTTGATAATGCTTAAAACTTTTGTAGAGGTAGACTTTATCGTACA-AAAATAAAGGTCGAAGAAAATATAAAAAACCTACTTTAT 42073
173 E P L E M T Q E F R Y F N F T S P W E Q I E I S K P N I K D 202
42074 TCGCATAGT 42082
203 N K K 205
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 393
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.08
394 ACAACTAAAGAAAAAATGATAAATATATGTATCATAACGTTATATATATTTACTTTTGTTATAGGTATATTTTATCTTAGATATATAAAT 483
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
484 ATAACAAAAAAAGTAGACTTA---AAAATTTAT---TATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAAGAAGAAATTATTTTA 567
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
568 AATGTGGTAATAATAATAACTTTTATAATAATTTATATTTTTATAATATATAAATTTACTCAATATTTTAAATTACAA---GTA---ATT 651
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
652 ---AAAAGA---CATCTTTACTTAATAGGAATACCATTAAATAATAATTGGTATTCAACCGTTCATCGAAAGTATTTA---TGGCCT 729
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1517
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
1518 ATATGTAAATCTTTATAT---AAAATAATGCCGACAACTAAATATTCGGTA---GTTAAAGATATTATTTTG---GTGAAATATAGTTTA 1598
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
1599 GATACT---TCAGCTGATTATCAACCT---TCTCAAGATGAAGCCTCATATTTCCCTTCTGATGATATTAATGATATGATACCAGTACAA 1682
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
1683 ATGCAAGATATACCTGTTAAATCCAAAGAGCCTAAAATAGAATATCCTAGAAGA---CCT---AATATTGATCTTAAACGTGAAACAATT 1766
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
1767 ATCCCTAGATTTGAAATTGAAACTGAAACAATACCACCTACAATAGTAAATCCACCGGATGTTATTAATAATGATTTACCTTTTGAA 1853
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3763
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
3764 ATTATTGCTTTAGCTCACCTATCACATAATACATTAATTATTCCAAACCAAACCGAGAAAAATTTATATGTTAGGGTAGGGCTTGTTACT 3853
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
3854 AGTACTAAAAGTGATTCTAATATTAAAATTGATAGTTATCAAGTTACT---AATGAG---GATTCTAATAAACAAAATAAAGATCAAATG 3937
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
3938 TTTCGTATTTTTCCTACT---TTTTTAATTGTAGATGAGAAAATTGAGCCCTTAATAGTA---AATCTTGAAATGACG---TTGTATTTT 4018
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
4019 TATGGCAAAAATACAGATAATAAAAGTATTGTAGAAGAAATCATATTTACGCAATATGATTTAACAAAAAAT---ATA---TGGTCC 4099
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4673
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.08
4674 GAACTACCTGATTCTTTATTAACAGAATATCGCTTTTGGATTTTA---ATTTATATTTGTTGCATATATATATATAGTATTAAAAATATT 4760
1 M L L S E Y L S V L I F F I F S L G L S C I - I L G L S Y V 29
4761 CTGAAGGCTTCAGGAGATAACTATCTTAATTTAAAAGATATTATAGAGATATTGTATGCACCTTTGAAAACTATAGATCATGCTATTAAA 4850
30 L - A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D 58
4851 TATAATAAATATATTAAACCTTATTATTACAAATTTGTGAGTAAATTTTATAACTTTACTGAAACAAAAAATATAAATGATGACCAGATA 4940
59 V R F Y L V A I L F I I F D L E V A F L F P W A V A L S D V 88
4941 CAAGTATTTGTCTTTTTTATGCAGATATTTCCTAGAATTATCTTAGTTTCTATTTTAATGATAGATACATTTTATTTTAATAAATTAGAA 5030
89 T I F G F W - T M F I F L L I L T I G F V Y E W K K G A L D 117
5031 ATATTT 5036
118 W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5295
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
5296 ATGAGTATGAATCAACTCCTTATTGTAAAAGTGAAGTCTATAATGAATATTGT-TTAAATAAATATAAA---AATAAAAAAGCTCTTTAT 5381
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
5382 ACAAGTGAAGATTTAGATATTTTGAGAGCCTTA---TAT---TGTGAGCTTATGCCAAATATTATTCATTTAAAAATGTTTTTATCTAGG 5465
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
5466 ATAGAAGTTGTATCGGAAGTATCCTTAATGAAAACGTCAAAAATAGTAATATTTGGGGGGTATTTAGTATGTTGGGCTTATATATTAATT 5555
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
5556 ATAAGTTATTATAATTATCCTATA---GATTTAATTATGAGTAAATATCTTTTATTAAATTTTATGTTATATTTGGTGAAAGAAGAA 5639
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9769
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.08
9770 ATATTAATAAAATTTAAATATTATTTCATGATATTTATTGTTTTAACACTAAGTTTA---TGTTTTGCAATTATTATACATTATAATTAT 9856
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
9857 ---AATAAAAATAAAAAACTACTA---ATTAATAAAAAACAAGAG---CTTTCTAAACTATTAGATTATTTATATATCAAAGATATAAAA 9937
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
9938 ATGGAAATATTAGATTTATTTTTATTAAACTTATTTACAATAGGATTGATTTTTTCCTTAAGAAATCTTAATATTGGAGCAACCATAAAT 10027
61 F Y L V A I L F I - I F D L E V A F L F P W A V A L S D V T 89
10028 ATTTTCTTATTTCGACCAAGTCTTGTAATATTATCGCAAATTATTTCACTTTGTGTATTAATGTATGTTTTTTACATTTATAACTTAGTT 10117
90 I F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10030
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.10
10031 TTCTTATTTCGACCAAGTCTT---GTAATATTATCGCAAATTATTTCACTTTGTGTATTAATGTATGTTTTTTACATT---TATAACTTA 10114
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
10115 GTTATAAAATACAAA---TTTTACAAAATTTATTTATTTATGTGCCAATTTGAAACTTTTATAAAAATATGTGACATTTTTACAGGTGGA 10201
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
10202 TATCGATTCTATGAACTTTTATACGAT------AACTTACAT---GATTTTATTTATATTAAACTAAAACCAATTAATAAAATAAACTCT 10282
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
10283 ---TCTTATTTACAAGTGCTAATGATAATACTATGCAATAAGATCTTGTACATATATGCTTATATAAAAAATATCTTCTATATTTTA 10366
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10673
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.20
10674 GAGATTTCAAAAGAATATATCAGCCATATAGTATGCGTTTA-ATCTTTTTAGGAATATTAATATTATATTATAATTTTTGTTATAGTATG 10762
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
10763 TCATACTATAATTGCATGATAATAACAATA---CCTTTATTATTAAGTTTTATATTATATGAGCATAGTTATCAATATTTAGTGAATTTT 10849
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F - D V 59
10850 AGATATTTATGGATAATAAAAATATTATATTATACTAATTTAATATTGGTAATATATATATTTATA---ATAATATATTTGTCAAGGAAT 10936
60 R F - Y L V A I L F I I F D L E V A F L F P W A V A L S D V 88
10937 ACATTATAT---TTTATAACCGATAATATACATATATTCAATTTTGAACTTATTCAAGAATTTAGCCAAAAAGAA---AAATACGACTTT 11020
89 T I F G F W T M F I F L L I L T I G F V Y E W K K G A L D W 118
11021 TTC 11023
119 E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10711
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.18
10712 TTAATCTTTTTAGGAATATTAATATTATATTATAATTTTTGTTATAGTATGTCATACTATAATTGCATGATAATAACAATACCTTTATTA 10801
1 M L L S E Y L S V L I F F I F S L G - L S C I I L G L S Y V 29
10802 TTAAGTTTTATA---TTA---TATGAGCATAGTTATCAATATTTAGTGAATTTTAGATATTTATGGATAATAAAAATATTATATTATACT 10885
30 L A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V 59
10886 AATTTAATATTGGTAATATATATATTTATAATAATATATTTGTCAAGGAATACATTATAT---TTT---ATAACC---GATAATATACAT 10966
60 R F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T 89
10967 ATATTCAATTTTGAACTTATTCAAGAATTTAGCCAAAAAGAAAAATACGACTTTTTCATAAAATATTTAAATTATACCCTGTATATGGAA 11056
90 I F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11303
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.08
11304 ATCCAATTACTAAAATATATAACAAA-ATAGGAGAATTCTTAAATAGTCAAAAATTTGAATG-GATATGATGGGTTTTTTAAAATTGTTA 11391
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
11392 TTAACAGATCCTTCTTCACA-CAAAAAATGATAGAATGGTTATCTATTGATGGTCCACAAGATAACGTA------ATATTCTTATTAAAA 11474
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
11475 ---TACTTGATTTTCTTCATAAAACGATGTTTAGAATGAGAATTAATGTTT---TTCCCTTTTAAA---AATTTAAATATGTTAAACATT 11555
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
11556 CTA---ATTTTAATTATAGTGTTATTTTTAACAATTAAAATAATATCTTTTATTAAAAATAAAAGGTATCCAAAATTATCTGTGAAT 11639
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11561
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.06
11562 TTAATTATAGTGTTATTTTTAACAATTAAAATAATATCT---TTTATTAAAAATAAAAGGTATCCAAAATTATCTGTGAATGAATATAAA 11648
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
11649 AAATCTCCTGAATTATTATTAGAATATTTAAATAAATATTATGTAACT---AACATTTATTATAGTATTTTTAAAATAATTAT-ATATGT 11734
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
11735 TTTTT-AAATTAAGTATTATTTTTTATTTACGTTATTTATATTTAGGTCAAAATTTTATGTTATATAAGTCAGAAAATAGTATTATATAT 11823
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
11824 CTCTCTTCATTTAGTCGATTGTTATTTATGAGCATTTTAATTATAATTGTTATTTATAATTTTTATAAA---CTTTTGGATATTATT 11907
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12040
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.04
12041 GTAATTTTACACCGATTCCTGATGAATATTATTATGATGATCATTATATATATGATTGGATT-TATAA-TTATACTTTTGTTACAAAATT 12128
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
12129 ATCACTAAATTTATTTATATATCAAAA---CACTTTTATGATACA---TTTAT-TTTTTAAATGTAGTAAGAAAATGTTTC---GTTTGT 12208
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
12209 TATATATTCATTTACATTTTGATGCCTTTGGCAAATATTTACATATT-TTATTATTAAGTATAGTTATTATTTATGAGATAATTCATACT 12297
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
12298 AATATGTATTATACTTATTATATGCTTTTTATTACTTACATAATTAATGTAATATATAAATATTATATTTTTGAGAAAAAAAAAGAT 12384
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12415
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
12416 TTTATAATGTACAATATTTTATATTTGCTAATAACAAAAGTA---CT-TTAAACATGAAAACCAATATAGATTATTTATATTTTATGGAA 12501
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
12502 AAATTAAAAGAAGAAACTACTATTAAATATATTTTAAATGATTTTGAACAAGTACCAGAAGAGTTAGTCAATAAACAAATAAATCAAATG 12591
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
12592 TACTTACGTTTTAGTATAATACTAATATTACTTTTTATGACAATT---TTTCTTTATGAT---GTTATTAGATATTCTATAATAATAAAA 12675
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
12676 ATACTTAATTACAATATATATTCTTTTTTTATTCTATTGCCATTAATTTTTATATTATATTCAGCAACTAAAATTTTTACTTTGTCT 12762
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12684
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.21
12685 TACAATATATATTCTTTTTTT---ATTCTATTGCCATTAATTTTTATATTATATTCAGCAACTAAAATTTTTACTTTGTCTAATACA--- 12768
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
12769 GCTGAAATTGATGATTTTACAGAATATGTCTTTAATAAAAAATT-CAATATTATTTCTTGGATTTTAATATCAATTCATTATTTATATTT 12857
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
12858 TTAATAATATTACAACCAAAATTTATTTTTATGGAAACCGAAATTTTATTTAATCTACCATATAGTATAGTAACTAT-AACTCAAATATA 12946
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
12947 TACTTCTCAAGAAAAAATTATGTATTTGTTTC-ATATTTCGAATACTGTTTGTTTAT---TATTAATATGGA---TATAAATATGAA 13026
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16468
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.07
16469 ATTATACATACAGAGGAAGCCCGATTAATGATGTATTTTATATATTCC---TCACAACAA---CTTAATAAAGCTTTACACGAAAATTTA 16552
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
16553 GGTATATCTTATTATTATACTCAAAATTATGATTGTTTTGGAATTAATTATAGTTTTATTGT-CTTTTTGAAAATTCAGTTAAAATTAAA 16641
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
16642 TTATA-AAACTTGTTATACTCATGAATTATTTCCTTCTCTTTTTAAAATTCTCAATACAACAGATCCTCATTATCTCACATTTGCACAGC 16730
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
16731 TTCTCTTTG---ATCTTAATAAATCTCCTAACGATGATAATTATTGGGATGGTATCATTACAAGTCCTTATTTTGTTAAATTTTAAT 16814
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17307
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
17308 AGACATCTGGGAAGCAAATTGTCTCGGCTTTGCTATTACAATGTCATTTTATCACTTATAATTGTTTATATTATTTTATTCATGTTTTTT 17397
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
17398 TTATGGTCAAATATAAGCTTTAATTTAGGTTCTTGGGTTTCTGTAGGTACTTTAGATATTACTACAAATTTATAATGATCCTTT---ATC 17484
31 A T Q N A D V E K V S P Y E C G - F N P F D D A R S A F D V 59
17485 CATTACTTTGGTACATTAATTCC-TTTATTACTTTATTAATCTAATTTATTCTTATGATATTTACATG-AAGATCCTAATTAGTTAAATT 17572
60 R F Y L V A I L F I I F D L - E V A F L F P W A V A L S - D 87
17573 TTTTGCTTATTTAGTTTTTTCTCTTTTTCTATGTTTGTCTTGTTTTTGCTGGTAATTACTTATTATGTTTTTAGGATGGGAAGCTGTGGA 17662
88 V T I F G F W T M F I F L L I L T I G F V Y E W K K G A L D 117
17663 TTAGCT 17668
118 W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17599
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.07
17600 TCTATGTTTGTCTTGTTTTTGCTGGTAATTACTTATTATGTTTTTAGGATGGGA---AGCTGTGGATTAGCTTCTTATTTCTTATTAATT 17686
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
17687 TCTGGATACAAGAAATCAAGCAATCAGTCTGCTATTAAAGCAATTATTTTTAATCG-TGAGGTGATGCAGCTTTCATAAGTGCTATGGGT 17775
31 A T Q N A D V E K V S P Y E C G F N P - F D D A R - S A F D 58
17776 CTTATTTATTATTTTTTAATTCTTTGATTTAGAAGATTTAGAATTACTTGTTCACAATATGAACATACTACTTTTAGCTTTTTTCATATT 17865
59 V R F Y L V A I L F I I F D L E V A F L F P W A V A L S D V 88
17866 CTTTTCAACAATTGAATGATAGCTCTTTTCCTATTTTTGCTGCTGTGCTAAATCAGCACAATCTTTTTACATCCTTGGTTACCTGATGCT 17955
89 T I F G - F W T M F I F L L I - - L T I G F V Y E W K K G A 115
17956 ATGAAG---GAC 17964
116 L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 18195
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.17
18196 GTAATTATACTTTGCTTTATTTCATTTAGTAAATATGCTTTCTTTAAA---GCACTCTTATT-TTATGTGCCGGA---TCCGTTATCCAC 18278
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
18279 GCTACCGGCCATCAGGATATTCGGCGTATGGGAGTTTATTTAAAGATTACCCATAACTTATGTTGCAATGCTCTTGCTTCTTTATCTTTA 18368
31 A T Q N A D V E K V S P Y - E C G F N P F D D A R S A F D V 59
18369 ATTGGTTTTCTTTCTTAAGTGGTTTTTATAGAAGGATTTTCTTCTAGAAGCTACTTACAATATATTTGGTATGTCTCTTATGTT---ATT 18455
60 R F Y L V A I L F I - I F D L E V A F L F P W A V A L S D V 88
18456 TATTTTATATCCATATTTCTACTGCTGTTAGTTATTTTACTCTTTCCGATTAATTTTCTTTGTGTTCTTGGTGATCAAGCATATCAATAA 18545
89 T I F G F W T M F I F L L I L T I G F V Y E W K K G A L D W 118
18546 AAA 18548
119 E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 18455
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 5 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.06
18456 TATTTTATATCCATATTTCTACTGCTGTTAGTTATTTTACTCTTTCCGATTAATTTTCTTTGTGTTCTTGGTGATCAAGCATATCA-ATA 18544
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
18545 AAAACATTGAAAACT---ATTCTGAAAGCTCCTATTTTCTATATCTACATTAATTATTTTAACTATACTTTCTA-TTTTTCTGGATTTTA 18630
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
18631 TTTAAAAGATTGATGACTATTCAAAC-ATCTTATATAATTTTAGTGCCTCTCTTTC-AGTGATACAGCTACTGATCAAGATTCTTTAATG 18718
61 F - Y L V A I L F I I F D L E V A F L F P W A V A L S D V T 89
18719 ATTTATTTAAAGTTTACCCACAATCTTTTCTTTATCGGTTTACTTTTAGTATATATAATTTATTG-AAATTAAAC---TTAAAAAGTCAA 18804
90 I F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 31158
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.04
31159 TATACTTTGGCTGCTTATGAACAAATAGATCATACTTACAAACGAAGCAGG---TTTAAAATATTTCTATTTGGATCTATAGCAGTTCTT 31245
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
31246 TATATTTATTTGGTACCTCTAACTTTATTTATATACAGGATCTGTTAATTTTGATAGTATAGT---GCTCTTTCTTATTTTCAATTGAAA 31332
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
31333 ATAATATATATTTCATATAGTTTAGTTTTAATT---CTT---ATAGTTTATTT-TTTAAACTCGGTATAGCACTT------TTC---ATT 31406
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
31407 TTTGGCTTCCTTTAGTTATACCTATTCTTCTTCTATGTTACCTATTTATTTATTTAT---TACCAAAAATCCATTATTTTATTTATT 31490
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 31853
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.20
31854 GGATTTTTTTCTAAATTATTTATTTATTATCTGCTTTATATTTTCAGCTTA---TTTACTTGTGCTGTTTTA---TTAGCTTTTTCATTA 31937
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
31938 ATTAGT---AGT------TTTTATTATTTGCGTTAGTTAAAATGTTATATTTCTCCTTTATTTAAAAAATGCTTCTGTTATAGTATACCT 32018
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
32019 ---GCTATACCTGCTATATTATT-ACTATCTTTTCTGTAGTAGTATTTTTTTTAGATTTATCCAACGTATTTTGCAATTTTATTAAATTA 32104
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
32105 AACTACGATCACAATACACTAGTTGATAACACAATATTCATCTATGGAGTATTTACAATCATTATTCAAGGTGTAATTGTTTGGGAG 32191
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34025
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
34026 TTTTTATTCGGAGAGGTTCTTTGA---CTTTGCTTCTTGCTA---AGC---GGATTTATATTTAATGTAGTAGGGGATGTGTTTATATTA 34106
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
34107 TTATTAGTCAT-GTTACTATATGGGGTTTTAAAAGGATTGCGATTAACATGTTGATAATGTCCAT-TCTAGAGAT---TATACTTTAGAG 34191
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
34192 AAGGAAAAAGGTAAACACTTCTTTGTGGATTACTCCCACTTCATCCGTTTTAACTTAGTATGGTCTTACATCCTATCGCAGTTGCCACGG 34281
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
34282 TTTTA-TACTACAATGCTTTTATATACATCCTTACCATCTCTTTGATATACTTATATGCT---TCTTTATCTCGCGAGGATATAAGA 34364
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 36309
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.16
36310 TACCTCATTTGCTACTATTTTTTTTATTATTTATTTTATAACTTATCA---GGATTAGCCCTTTTAGTTTTA---CTGCAGTTCACATTT 36393
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
36394 AGTAATTACCTTGGTTTAGCATTAAGTATTTCA---TTGCAT---GGGTTATATAGGTATTAAAGAATTAGGTCTAAATTCGTATATGTT 36477
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
36478 TTTGTCCTAAAAATATGCTTTATGGTTATTACCTTTATTAATTGTGTAGAATTTTTATTTTCTTCTTACGTCCTATAGTCTGGGTCTTCG 36567
61 F Y L - V A I L F I I F D L E V A F L F P W A V A L S D V T 89
36568 TTTATTTGCAAATATGTTAGCGGTCATATCTTATTACA-TATTTAGCTGGTGGTTGTGTTTATTATTAACTAAACTATTATCTTAGCAAT 36656
90 - I F G F W T M F I F L L I L T I G F V Y E W K K G A L D W 118
36657 TCC 36659
119 E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 36439
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
36440 ATAGGTATTAAAGAATT-AGGTCTAAATTCGTATAT---GTTTTTGTCCTAAAAATA---TGCTTTATGGTT---ATTACCTTTATTAAT 36519
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
36520 TGTGTAGAATTTTTA---TTTTCTTCTTACGT-CCTATAGTCTG-GGTCTTCGTTTATTTGCAAATATGTTAGCGGTCATATCTTATTAC 36604
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
36605 ATATTTAG-CTGGTGGTTGTGTTTATTATT---AACTAAACTATTATCTTAGCAATTCCT---GCTTTTGCTATATTGGCGCTATCGGTA 36687
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
36688 TTTAGAACTTGG---TATAGGATTTTTACAAGCTTATATTTTGTTATTCTTTTAGCCATCTATCTTAAAGATTCTTTATATTCTCAT 36771
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 6861
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.06
6862 ATAACTGCAGGAGATTTTGTTATTTTTATCAAGTTACGTTTTTTTAATTCATCAATAAGTTGCTGCTTGGTTAAT---TCTTCCATACTT 6948
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
6949 GTTTTTTCAGTAATATTAGTAGTATATATAACACCG---TCT---GGATTT------TTTAATTCAGGA---ATTGGTTTTACGCTTGAA 7023
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
7024 GAAGTATTA---TCTATTTTAGAGAAATCATTTAAAACAGTAGTAGACGGGGTATGT---TGGGT-ATCATTAGTAATACCAAAATGCAA 7106
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
7107 TGGAGGTATTGGAAATGTAGGATCACTAAGATTTATATTTTGATTTTCGTGACTTATTGTGTTATTTATACTCTCAGGCAATGGTAT 7193
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 13448
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.09
13449 ATTACTTTTTCCCATTTTGTTGTGGTTTGTTTTTTCTTAATTAAATTTTTTTCATCTTCTTGTAATATCGTTGTTATT---ATTTTAAAA 13535
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
13536 GCCTTTTCGCATGCTTCTTTATCTAAATTAATACGTTCGTTCTTATAAATAAAAGTGTTCACAATAGGA---TCGGTGGTAGTAATTGAT 13622
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
13623 GTGTTCTTAAGAGCT---TTATAAATTTTAGTTACTATATCGTATGCTATTATT------TGGAATTTAGACATGGTTATTTTCAGTTAT 13703
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
13704 GTAGAACACTGGTATAAAATCATTGATTATGTTTATCTTATAGTAATTTTTTTTTAT------AAAGAT---ACATATGATTTTTAT 13781
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 13623
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.13
13624 TATTTTTATCTTGAAATGTTGTCCATACTCTTTCCATCAAAGATAAGC---AATATTTCTTT-GTATTATTGTATTTATCATGTTTATAT 13709
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
13710 GA-TCTTCTTTTAATAATGTAAAAAAGATTTCTTTACCATTGAAATTCGATATTGATGATTTTTCTATATTTTGTGCTTCCATAATTGCA 13798
31 A T Q N A D V E K V S - P Y E C G F N P F D D A R S A F D V 59
13799 TCGTATATTACTTTTCTTATTACTTTTTCCCATTTTGTTGTGGTTTGTTTTTTCTTAATTAAATTTTTTTCATCTTCTTGTAATATCGTT 13888
60 R F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T 89
13889 GTTAT-TATTTTAAAAGCCTTTTCGCATGCTTCTTTATCTAAATTAATACGTTCGTTCTT---ATAAATAAAAGTGTTCACAATAGGATC 13974
90 I F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 26624
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 35 Length-adjusted: 0.29
26625 GCGTTTAAAGGATTAAC-AGGAGAACGTTTATCTTTATTGTTTGGGCTGTATTAGTAACTGTGATTTTATTATTACTTTCACTGCCTGTT 26713
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
26714 TAG---CAG---GTG---CTATACTATGTTATTAACTGA---TGTAATTTTAATACATCTTCTCCTGATGCAACGGTGGTGGAGATCCTA 26791
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
26792 TTTTATATCAACATTTGTCTTGGTTTTTTGGCCAT-CCAGAAGTTCATTTTAATTTTACCTGGTTTTGGTATGTTTCT---ATTATTATT 26877
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
26878 CAAGCTATGCTAATAAAGTATTTTTGGTTATTTAGGTATGGTGTATGCTATGTTGTCTATTGGTATTTGGGTTTTATAGTGTGGGCT 26964
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 27096
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
27097 TGGTTATTCTCAACAATCATAAATATATGG---TACTTTATATTTATTATTTAGTATGGTGCTGGTTTAGCTGGATAGCCTTATCTGTTA 27183
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
27184 TATGCGTATGGAGTTAGCAGTTGTGGTGATTTAATTTTAAATTTAATTATCAACTTTATAATACATTGTAACTGCTCATGCCTTATTATG 27273
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
27274 ATTTTTTTCTTTGTGATGCTGCTTTAATTGGTGGGTTTGGAAATTGGTTTGTACTTTACTTATAGGTGCTCCTGATATGGCATTTCCTCG 27363
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
27364 TTTAAATAATATAGTTTATGGTTATT-ACCTTCCTCTTTAATTTTACTTCTTTTATCTTCTTATG-TTGAAATGGTGCTGGAACTGGTTG 27451
91 F G F W T M F I F L L I L T I - G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37026
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.13
37027 TTATTATTGCAAATGCTCATGGGTTTCTTCTTCCGCTTTATTTTTAGCAATGGAATGTTATATGATGATATAAATCACGTAATATTTCTA 37116
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
37117 TTATCGTGGTTTGTTACTGTTATGCCAATATTTTGTTTCTTCTT-TTTTATTTTTTCTTTAGCGAATTTAGGGTTTCTTCTACTGTTAA- 37204
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
37205 TTTTATTCTGAAATGTTAATATTTTTTGGCTTATTTCAAACAGTCCTTCTATAGCTATTTAACTTTAACAGGTATTTCTTATCTGCAGTT 37294
61 F Y - L V A I L F I I F D L E V A F L F P W A V A L S D V T 89
37295 ATTCTTTTGTTTTACTTACTCGCATGCTTTTG-GTCCTGCAAGCCATTTCTTTCTGTTTATATGATTTGACTCGCCGAGAATTTTATATT 37383
90 I F G F W T M F I F L L I L T I G F - V Y E W K K G A L D W 118
37384 TTA 37386
119 E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37218
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
37219 TATACGCTTTCTCTTTTCTTATTCCTAATGCTTCTTTTTATTTCTACCATTAATATTATAGTTGCTGTGATATCAATTATATTAGCTCTT 37308
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
37309 TTACAGTTTACGTCAAAATGATTTAAAAAGGATTATTGCTACTCATCTATTGCACATATGAATTTTTTAGTGGGCTATTTTTGTAAAAGA 37398
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
37399 TTTATTAGTTTAACAGGTTCTTTATTATTGCAAATGCTCATGGGTTTCTTCTTCCGCTTTATTTTTAGCAATGGAATGTTATATGATGAT 37488
61 F Y - L V - A I L F - I I F D L E V A F L F P W A V A L S D 87
37489 ATAAATCACGTAATATTTCTATTATCGTGGTTTGTTACTGTTATGCCAATATTTTGTTTCTTCTTTTTTATTTTTTCTTTAGCGAATTTA 37578
88 V T - I F G F W T M F I F L L I L T I G F V Y E W K K G A L 116
37579 GGGTTTCTT 37587
117 D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 38449
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 7 ||| 2 Nt shifts: 0
Score: 187 Length-adjusted: 1.57
38450 GAATATATAAATGAATTAGTTAAAATAGCTTT-TTTATAATGATGTCCTTTGCTTTAGCCTTAATTCTTTTAGGTGCTGTTTATGTTTTA 38538
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
38539 AGTTTTACATCAAAAGTGGATTT-GAAAAATCATCTGCTTATGAGTGTGGCTTTCAACCTTTTCT-GAGACTAATTA-TCTTTTGAGGTA 38625
31 A - T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V 59
38626 CAATTTGCTTTGATAGCTATTTTGTTTCTTTTATTTGATATGAA-ATCCTTTTCCTTTACCCTTTATGCACAAGTATTTTAGATTTTAAT 38714
60 R F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T 89
38715 GAAATGAGATATTTTAT-CTAGTTCTCTTTTTTATCATTGTTACTCTAGGCTATTA-TATGAAATATCTCGCCATATTGTTAGTTTCTTT 38802
90 I F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45617
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.08
45618 TATTTTTTTTCAGGATTCTTGAGTTGCCTAGCATTTTTGATAAGTTCATTG---ATT------ATTAAACGCCCATCCACTTTCATATTA 45698
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
45699 AAAGGT---GGGCTAGACATATCAAATATAAAA---TTC---TGC---AT-AATGGTTTCGATCTTGTTAGGAAAAATTTCAAAATAACA 45775
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
45776 CAAAAATTATTA---TTTCAAGAAATCTTGTATAAT---GAAACAAAGTTTTTTGCCAAATTAAAAGCTGCTAATCCTACACTGGATATC 45859
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
45860 AGAAAATTT---AAAATA---ATTCCTTTAACGATTTTGAAACGTTATTATCTTTCTGAT---AAATATAATTTTAAAGAAACAAAG 45937
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 56296
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.18
56297 TTTAACGATTCAGCTTTCTTAGGATTGCTTATATTTTAGTTTATATGGTGCTATTTGTGTACTATTTTTTATATAATATTACTTCACATT 56386
1 M L L S E Y L S V L I F - F I F S L G L S C I I L G L S Y V 29
56387 TACGCTCATACACGCTTATGCAACGTCAAAATT---CCATTTTATTATTATTTTAATTTTTATATTTTTAATATAATGACTTTTTTATTT 56473
30 L A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V 59
56474 AGCGATACAATCTCGAGATTGTATTTTCTCTAATTATCTTTTAAATGATTAGAACTTTTTACC---TCATATTCTTTAAAACACACAACA 56560
60 R F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T 89
56561 TTATATGTTTTT---AAGTATTTTTCTTTTATTATTGCATTATTCTTATTGTATTTTTATCTACTAAATTTGTCGGATATAATAAAACAA 56647
90 I F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 56440
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 5 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
56441 TTTTCTTTATTCGAATATGCTTTTAAGTTTATATTTTTCTCTTATTATTATATATACAGTAACACCAA-ATG---CTATCATGCATTATT 56526
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
56527 AGCTTT---AATTTTATTATTCATAACTTCTCA---TTTCTATT-ATTTTTAACGATTC-AGCTTTCTTAGGATTGCTTATATTTTAGTT 56608
31 A T Q N A D V E K V S P Y E C G F N P F D D A R S A F D V R 60
56609 TATATGGTGCTATTTGTGTACTATTTTTTATATAATATTACTTC-ACATTTACGCTCATACACGCTTATGCAACGTCAAAATTCCAT--- 56694
61 F Y L V A I L F I I F D L E V A F L F P W A V A L S D V T I 90
56695 TTTATTATTATTTTAATTTTTATATTTTTAAT-ATAATGACT------TTTTTATTTAGCGATACAATCTCGAGATTGTATTTTCTC 56774
91 F G F W T M F I F L L I L T I G F V Y E W K K G A L D W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 60190
Protein: lcl|KC353356.1_cdsid_AGH24295.1 [gene=nad3] [protein=NADH dehydrogenase subunit 3] [protein_id=AGH24295.1] [location=complement(42190..42549)] @ 0
DNA length: 714 Protein length: 119
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.08
60191 ATCCTACTTAGCAAATTTTTCTCTTTACATTATATTTACCTTTTGTATTTTAGCTTT---TGTTTTATTACA---TTTAGCCTTATACAT 60274
1 M L L S E Y L S V L I F F I F S L G L S C I I L G L S Y V L 30
60275 CAATCTGGTAGTGGTAC-ATCTTCAGGGTGGGGCCGCTCTATTGATGAAATTCTTTTCATCCTTATTATAC-ATTAAAGATTTTTTTAGT 60362
31 A T Q N A D V E K V S P - Y - E C G F N P F D D A R S A F D 58
60363 GTAATTTTATTTATAGCCATAATTATATTCTTTGTTCTTTTATACCTAATAGCTAGGTCATCCAGATAATTATATTCCTGCAATCCTGAT 60452
59 V R F Y L V A I L F I I F D L E V A F L F P - W A V A L S D 87
60453 CAAACTCTGAGCATATTGTTCAGAATGGTATT-TTCTACCTTTTTATGCATCCTTCGATCTATTCTAATAAATTATTAGGTGTTATTGCC 60541
88 V T I F G F W T M F I F L L I L T I G F V Y E W K K G A L D 117
60542 CTTGTT 60547
118 W E 119
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 474
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
475 TATATAAATATAACAAAAAAAGTAGACTTAAAAATTTATTATATAATGCTAAAAAATCTTTTTACTGAATTTACA---AAAGAAGAAATT 561
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
562 ATTTTAAATGTGGTAATA---ATAATAACTTTTATAATAATTTATATTTTTATAATATATAAATTTACTCAATATTTTAAATTACAAGTA 648
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
649 ATTAAAAGACATCTTTACTTAATAGGAATACCATTAAATAATAATTGGTATTCAACCGTTCATCGAAAGTATTTATGGCCT---TTAGCA 735
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
736 AATTCTTTTCTTAAAATAAGTATAAAACATAAAATTGAGTTATTGTATAAAAAATAT---TATTTTGATAAAAAG 807
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 741
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.13
742 TTTCTTAAAATAAGTATAAAACATAAAATTGAGTTATTGTATAAAAAATATTATTTTGATAAAAAGCCTCATAAACCAAGACCTGATAAT 831
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
832 TTTTTTTCTTTATCT---GAAGAGGCA---AAAATTTTATTTTTTAAA---AATAATCCTACATTACCTGAATTACTTTTTCATAAATAC 912
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
913 AAGAAAATGTCTATTTTCATAGATAATATTTTAACAAAAGGTCATTATTTTATATTAATTATTAGTATT---CTATATGATGTTATAAAT 999
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
1000 AATGATTTTATTTTGACTACTATATTTCAAATATTACCTTGGATATTTTTTTATGAACTTTTTCTAAGAATATCT 1074
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2492
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
2493 CTCAAGAAATTACAAAAT---ATTTTCCATCAGGTACAACATTACAAGATCTTGAAGAAGTTGCACAAGAT-GTAATGTATCCCAAAGAA 2578
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
2579 ATGTCTAGTATTCCTACTGAAAAAAGTGAAGAACCAATTAAA---TCTGCAGCAGTTAAAGAAGAAGAAAAAAAAATAATAGAAAAACTT 2665
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
2666 ATAGAAGCTGATACTATAGCGGAAAAAATACAAGGTAATTCTCATATTTTTAATCCATTA---AGATTA---GTTTATAACACC------ 2743
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
2744 AGTAGTAAAGTATGGAATTACCTAAAAAAAAATGTTGAATTTAAATTCCATAAACCTGAGTCTGATAATTATACA 2818
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3061
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.12
3062 ATTTGTAAAATTAAAAAAGATATTATTATAAATAAAGAACAAGAAAAAATTGTTATAGATTCTAAATCATCTTATGAAGAAAAATTGAAA 3151
1 M I R V K G G V T T R K R H K K I - I Q Q A T G Y R G R S K 29
3152 AATTTAGAAGAAAAAATGTCAATAGCTCTTAAAAATATAAATAATTTTCTTGAAAAAAATAAAGATTATACTAAAGAATTTCTTGAAGCA 3241
30 N N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S 59
3242 AAAGAATTACAAGAATGGTATGATTATTTTCAGAATAGAGGAGCATTAAAAAAATTATCAAAACAAGAAAAAGAAGTTTATGATAAATTA 3331
60 L W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L 89
3332 TTAGAAATAAAAAAT---AAATATTTACCTAGCGAAAAAGATTTTCAAGAAAAAAATAGTAGTTATTTGACACCTCTG 3406
90 I N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3778
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
3779 CACCTATCACATAATACATTAATTATTCCAAACCAAACCGAGAAAAATTTATATGTTAGGGTA---GGGCTTGTTACTAGTACTAAAAGT 3865
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
3866 GATTCTAATATTAAAATTGATAGTTATCAAGTTACTAATGAGGATTCTAATAAACAAAATAAAGATCAAATGTTTCGTATTTTTCCTACT 3955
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K - R F F R S 59
3956 TTTTTAATTGTAGATGAGAAAATTGAGCCCTTAATAGTAAATCTTGAAATGACGTTGTATTTTTATGGCAAAAATACAGATAATAAAAGT 4045
60 L W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N - I 88
4046 ATTGTAGAAGAAATCATATTTACGCAATATGATTTAACAAA-AAATATATGGTCCGAAAATTATTACCAATATCCTTT--- 4122
89 L I N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3940
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
3941 CGTATTTTTCCTACTTTTTTAATTGTAGATGAGAAAATTGAGCCCTTAATAGTAAATCTTGAAATGACGTTGTATTTTTATGGCAAAAAT 4030
1 M I R V K G G V T T R K R H K K I I Q - Q A T G Y - R G R S 28
4031 ACAGATAATAAAAGTATT---GTAGAAGAAATC---ATATTTACGCAATATGATTTAACAAAAAATATATGGTCCGAAAATTATTACCAA 4114
29 K N N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R 58
4115 TATCCTTTTAATGTGGATCAAGAATTTTTACGTCAACTTTCTATTATTTTT---TATAGTAATAAATTACAAGAACTTCAACAGGATTAT 4201
59 - S L W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N 87
4202 AAAGAACTACAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAAGACTATAATAAGGAAATAGATCGCCTTAATGAATTA 4285
88 I L I N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4159
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.18
4160 ATTTTTTATAGTAATAAATTACAAGAACTTCAACAGGATTATAAAGAACTACAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAA 4249
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
4250 GACTATAATAAGGAAATAGATCGCCTTAATGAA---TTAAAAACAAATTATTTGAAAGATAGAAAATATAAACAATATTTTAATTCATTA 4336
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
4337 ---ACAGATGAA---GAACAAAAATTAGTTTCTCATATAAAAATTTTTCAAGATAAGATTAAAGATGATAATATACAAAATGAAAAAAAA 4420
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
4421 CAAAAGAAAGAACTTATTAATCAACTTTTGGAAAAAAATAAAAAAGGA---AAAGATAAAGAAGAAGGAACAGAAATT 4495
91 N R K - I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5791
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.14
5792 TTAATAAATATATGTAAAATTATTACTTTCAAAGTAAAAGCAGATGAAAAAAATCATCAGGAAGTCTTTGAAAATTTTAGAAAAATACTT 5881
1 M I R V K G G V T T R - K R H K K I I Q Q A - T G Y R G R S 28
5882 AAAGAAGGTTTGTTTAATATATTAGAAAAGTTGGATTGT---CTTGAAGATTCACAAACAATGAAGGAAATAGTAGAAACATTTATGGAT 5968
29 K N N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R 58
5969 AATTTAATGCTGGAAGAATTATATATTAAATACCTTGCAAAAGATGAAAAAGATTATGAAGGTTTTATGAAAGAA------ATTCAATCA 6052
59 S L W I Q Q L N A A C I S L N - T N Y S T F I H Q L N V Q N 87
6053 TTATTAAAGGATTAT---CTTCTA---AGACTTCAAGAAATGAAAAAATTCAAA---GAAAATATGAATAAATTCACCTTACGA 6127
88 I L I N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5953
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
5954 GAAACATTTATGGATAATTTAATGCTGGAAGAATTATATATTAAATACCTTGCAAAAGATGAAAAAGATTATGAAGGTTTTATGAAAGAA 6043
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
6044 ATTCAATCATTATTAAAGGATTATCTTCTAAGACTTCAAGAAATGAAAAAATTCAAAGAAAATATGAATAAATTCACCTTACGAATCACT 6133
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
6134 GCAATATATGTAATTAGTAGTATTTTGTTACCTCATTTACCTATAACGTCATTATTTTTAAACAGCATATATATATAT---CTATTTGCT 6220
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
6221 AACAAATATTTAAAAGAATTTGAAGAACAAAGTTCGGATAAGAATTTTGAAGTAATTTTTCCTTTAATTTTGAAT 6295
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6390
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
6391 CGAGTAAGTATGATGCGAACTTTAATACTTAATAAAAAAATAAATAGCTTTCTGTATCTTTGTAAGCCGATAGTCATTCAAATATCTAAG 6480
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
6481 CGTTTTTATCCCACTGATAAAAAAATAGGTCATGCTAAAAAATTG---CTTGATCACCGTTCAATGTCTTTTTCTAAAAGAATTTCGAAT 6567
31 N F S I A I E K V H K G L Q Y S Y A H R K V N - K R F F R S 59
6568 CCACAATGTCGTAAATTGCGTCAACAATGTAAACAGCATCATAATAAATATATTACTGATACAAAAATACAAACTAGACATAGAGGTTTA 6657
60 L W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L 89
6658 AGCAATAGAGAATTACAAGGTATTCGATCTCCATTGAGTAGTAAAAAGTTTAAGGAGGTAAATAATATTGATATGAAA 6735
90 I N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7143
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.20
7144 GAATTAAAAAAACGTAACTTGATAAAAATAACAAAATCTCCTGCAGTTATTATTGAAACAGAAAGTGATGGTCATATACGTATTGGTAAT 7233
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
7234 AAAGATAATGATTTAATATTTACGAAACAC---GGGCGAGCGTATTTAGAATTACAGCCAAAA---AGTCAAATTTTTATAAATCCTTTA 7317
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
7318 GAAATCACCAAAGAAAATATTACTCTTGATGATTTAAAT---AATTTTTGTATTATTGTACCAAAA---AATTATGAGGATGATCTTATA 7401
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
7402 AAAGCCTCGCCA---CATATGATAGCAGCTTATGATCCTACTAATACTCATTTGTACGCATTTTCTACATTTACA 7473
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7446
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 28 Length-adjusted: 0.24
7447 CATTTGTACGCATTTTCTACATTTACAAGCGAAAAAGTTGGTCTAAAAGTAAGTGATGAGCAATTTAAA---AAATTTCAAATGAAAAAA 7533
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
7534 CAA---GGTATAGTATTTACTAAAGAAGAAGAA---TTAAAA---CCTCATAATAATAAATCCCAACAATTACGTTTTTTCAAAAATATA 7614
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
7615 CAAGTATTAGATAAAAATGAGGCTTATGTAGCCAAGTTTGATCAAGACTAT---TTTTTTACAATGAGTCTTAATGTAAAAAAGGATTTA 7701
61 W I Q Q L N A A C I S - L N T N Y S T F I H Q L N V Q N I L 89
7702 GTAGATAATTATAATAACTTAAAAACTAAACATTATGAGAAATATATGCCACAAACAATATCAAATGAACAATTATTA 7779
90 I N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9180
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.10
9181 ATTCCAAAAATATCAGGA---GTTACTCTACCCGAATATCCTTTAAAAGATGTTCAAAAAGCTAAT---TTTATC---CAGTTCTTTAAT 9261
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
9262 AGTATA---GTTAAAAATGACCCAATATGGGATAATTTATGTCAAACATAT---AAT---AAAGTAAATTCTTCATTTTTT--------- 9333
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
9334 TAT---CAAAAAATTAAAGATGCTTATATTAACTTAACTTTACAAACAGCTCATTATAAAGAACAAATAGCTATTTATTTATCATTTATC 9420
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
9421 ---TTAAAATTGATTGAAATGCACCCTCAAATA---CCTATTAAAGATATGTGCTTAAAAGCAGTCAATTATGAT 9489
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9426
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.12
9427 TTGATTGAAATGCACCCTCAAATACCTATTAAAGATATGTGCTTAAAAGCAGTCAATTATGATGTTTATTTTGACATAAATGAGCAGGAT 9516
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
9517 AGTTTTTATGTTACAATAAAACAGAATCCTTATAGTCCTATTGAAATTAGTCTTCAACATGATAATATTTGTTTGCACACTTTCCATTTA 9606
31 N F S I A I E K - V H K G L Q Y S Y A H R K V N K R F F R S 59
9607 TTACTTATTGAAGAAATATTTCTACAAAACTTTCAAGATAATATTGAACCATTTTCTGATCTCTTACTTAAAGATGAAAATGAAAGTAAT 9696
60 L W I Q Q L N A A C I S L N T N - Y S - T F I H Q L N V Q N 87
9697 AAATTTTATAAACAAAAAATGTTA---TTAATAAAAGATACTTATAAT---GTTTAACAAATTATTTTTCATATTACAGATATT 9774
88 I L I N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10513
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.11
10514 ATGTTAAATATAAATGATAAATTAACTACATATTTTTATGAAGATAAAATACACGATAAATTGAGAAAAACAATAAGTGAATATGAACGT 10603
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
10604 ACT---AGAATATTAATACAAAGTATGACTCTTTATTATAAATATGATAAACAGATAAGAGAATATATATTAAGAGATTTCAAAAGAATA 10690
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
10691 TATCAGCCATATAGTATGCGTTTAATCTTTTTAGGAATATTAATATTATATTATAATTTTTGTTATAGTATGTCATACTATAATTGCATG 10780
61 W - I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N - I 88
10781 ATAATAACAATACCTTTATTATTAAGTTTTATATTATATGAG---CATAGTTATCAATATTTAGTGAATTTTAGATATTTA 10858
89 L I N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14701
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.09
14702 ATAAATCATGTAAAAGATTTTCTAGTATTTATAGGTAATCATAACAAATTATTTGATAATCACTTATGCAAAAAACTAATTCTTACAAAA 14791
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R - G R S K 29
14792 AAACAATATTTATCTAAATATTCAAAACTAATGGAAAAGGGTTTAGAAAATAAACTC---CATAAAAAAACTAGTAGTATTCATACTCTT 14878
30 N N F S I A I E K - V H K G L Q Y S Y A H R K V N K R F F R 58
14879 GATCAATACATTCAACATGATTTGAATAAAAATGAACAGAGTACTAAA---GACTTAGCTATTTTAGCTAAAGAGATAAATGCTGCTAAA 14965
59 S L W I Q Q - L N A A C I S L N T N Y S T F I H Q L N V Q N 87
14966 CTACTTTTAAAT---TGCTATTATAAAGTAGTTGCTCAAAAATTTTATAATGCTCATTTTATAAAAGATGCCATAATTTATCAA 15046
88 I L I N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14836
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.07
14837 GAAAATAAACTCCATAAAAAAACTAGTAGTATTCATACTCTTGATCAATACATTCAACATGATTTGAATAAAAATGAACAGAGTACTAAA 14926
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
14927 GACTTAGCTATTTTAGCTAAAGAGATAAATGCTGCTAAACTACTTTTAAATTGCTATTATAAAGTAGTTGCTCAAAAATTTTATAATGCT 15016
31 N F S I A I E K V H K G - L Q Y S Y A H R K V N K R F F R S 59
15017 CATTTTATAAAA------GATGCCATAATTTATCAACATTTTGAATATTTTTATCTTCCAATAGAAATAAGCGGTGTTGGTCGCATACTA 15100
60 L W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L 89
15101 ACAGTGTCACATATTTTAAGT---TTT---CAAACTAACAAGTTTGCAAGACCATTTCTTAATTATTTCATAAAAAAT 15172
90 I N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15836
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
15837 CCGATACTTATTCTTTTCCTGATTCTTTTATGCAAGAA-TGTAAATGTATAATATCAGATAAAGTTTTAATGAAGATATCAAAGAAAAAG 15925
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
15926 AAAACTATTGTATTTTTAAAAAAACTATTAATAGTTTTT---TATGATTATGCTATAAATAAAATAAATAAAAAAGAACCTTGGATTTTA 16012
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
16013 GAA---AATATCATGGATCGGATTATAATTAAACAAAGTACAATGGCAGATCTTTACGGAATGACAATAGGAGGTAGTCGTAAATCTATT 16099
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
16100 TCAAATGCGCTCATTGAAAAAATAATTGAAAAAGGAAAATTTGATATAAAC---CTTTCTTATATT---CACATA 16168
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16219
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
16220 TTACCTTATTGTGATACTTATTTAACATTACGAGAATTTCTAAAGAAAATGGAAGGTCCTTTAACAATGTCAACAGAATTTTTAACATGG 16309
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
16310 TCATATAATCCAAGAAAAATGAAAATATTACGT---ATAAATGTT---GTAAAATATTCAAAAATAACAAATGACCTT---AAATCTTTG 16390
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
16391 AAACGACGTATGATTAACGTAGCATATTTTACAGGAAAAATTGAT---CAAACTAAAATATATAAC---TCAGTTTCTGCTTTTATTATA 16474
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
16475 CATACAGAG---GAAGCCCGATTAATGATGTATTTTATATATTCCTCACAACAACTTAATAAAGCTTTACACGAA 16546
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16378
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 41 Length-adjusted: 0.36
16379 CTTAAATCTTTGAAACGACGTATGATTAACGTAGCATATTTTACAGGAAAAATTGATCAAACTAAAATATAT---AAC---TCAGTTTCT 16462
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
16463 GCTTTTATTATACATACAGAGGAAGCCCGATTAATGATGTATTTTATATATTCCTCACAACAACTTAATAAAGCTTTACACGAAAATTTA 16552
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
16553 GGTATATCTTATTATTATACTCAAAATTATGATTGTTTTGGAATTAATTATAGT---TTTATTGTCTTTTTGAAAATTCAG---TTAAAA 16636
61 W I Q Q L N A A C I S - L N T N Y S T F I H Q L N V Q N I L 89
16637 TTAAATTATAAAACT---TGTTATACTCATGAATTATTTCCTTCTCTTTTTAAAATTCTCAATACAACAGATCCTCAT 16711
90 I N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42579
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
42580 ATTATTTTTCCATCAGGTGTGGGCGTGTTTTTACCGTTTAGTAAGAGCTTAGTTGAAAGACAAATTACGTTCGATATTTGATATTCCAAA 42669
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G - R S K 29
42670 AAGAAGATCACATGGCTTACTAGAAAG---AAAAAG---GTTCGCCGTTTATAGAATATGACTCCAGACTTCAAAAGACATTATAGATAT 42753
30 N N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S 59
42754 AGAACCTTTATACAATTATACTTACAGAAACTAGAAGATTTCTTTATACAGGCCATATTTAAAAC-GAAAAAAACGTATTAAATATACTT 42842
60 L W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L 89
42843 AAGAATAAGCGTTTTGAAAAAAAATTAGTACAAAATGAC---TACGTCCTT---ACTTTGACGAATGACCTAAAAACA 42914
90 I N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46103
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
46104 AGTATACGTACTCGTTTATCGAAAGTTTTAAACGGCTCCGAATTTTCGGATACCATAGCCAATGACACAGGTCATGTTAAGAAATCTATT 46193
1 M I R V K - G G V T T R K R H K K I I Q Q A T G Y R G R S K 29
46194 ATGAATTTAATACTTCGCAGCAAAGATCAAAAACCATTTACATCATTTAATATAAATATTCTAACTATAGCAAAACGTATC---AAGGAT 46280
30 N N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S 59
46281 ---TATGTT------ATTAATGATAATGATATTCTTATGAATACGGATAAAGATAAATTGGCTCAAGCTATTGAAAGTGCTAAACTTATT 46361
60 L W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L 89
46362 GATTTATCTAAACCTAAAAAATCTAAAAATAAAATAGATCCT---TCT---AAAGCTGTTGTTAATACTACTAGTAAA 46433
90 I N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46712
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.10
46713 ATTCCAGTAACTCAAATGCCTTCAATACTCAATCCTACTCATATTGCATATATTCAACAATTAGAAGCTTTTCAAGCAGCAACTTATGTT 46802
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
46803 GAAGGGAAATTTTCAGTG------TTA---GAGGGTATTGAATATATACATAATAATCAACCACGATTAAATAGGGTTGAGGACACCCAT 46883
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
46884 AGTTTACAAGGTGAAAATACTTCTTATCATCTTTTTATAGAAGAATACAAGTCTTTTATTCTTGGCTTAAATCCAGAAAAACAAGGTATT 46973
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
46974 GCTATTAATTATTTACAAACCATTATAACTTATCAACACAGTATGCTTTTAGATACAACACCATCTCCGCATGAT 47048
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61606
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
61607 TTTATAACAACAAAATCCGGAGAGTACTCCAAAAAAACACAAAAAATGAAAACCGATGAAAAAAAAAACCAAAAAATAAAAAACACAAAA 61696
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
61697 AAAATATTTTTAAAT---AAAAAATTTTTTCCAATATTATTTTTTATAATAATATTAAAAATTTTATTAATACGTGAAATTTTTTATTTT 61783
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
61784 CATGAATTAATTACATATTTAAAAATAATACCTATAAAATTTGATAAAATTTCTTTAATTTTTGAT---AATTTACAAAATATTAATCTT 61870
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I - L 89
61871 ATTAATTATGATTTTAATAAAAAAAACGAAAATATGATTTTATATCAATATGCTATAATTTTCCCTATGATTTATAAG 61948
90 I N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61945
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
61946 AAGGGAAATACAAAAAATTTTATTTGTAAAAAAATTACCATAAAAAATTTTATCCGTTTTTATCCAGGTCATGTGAATAAAATTATCAAT 62035
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
62036 ATTATTAATACTTCTCTAAAAAAAGTATCACCACAAGCACTTATTGAACAAAATCGAATAGAAGCTAATAAAATGATTATTTATGCATTC 62125
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
62126 TGCGAACATTTTAAAAATGATAACTTATCTGATTTATTAGATGATCACAAAATTATTAATCGTATGCATGATTTTATTCATAAACAACCA 62215
61 W I Q Q L N A A C I S L N T N Y S T F - - I H Q L N V Q N I 88
62216 ACTCTTAGTTCAAGAGCATTT---CAATTAGCATTGGAAGTTTCATATTCTAAACGTTCTTTTAACGAAGCTACTTTGCAA 62293
89 L I N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 1555
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.19
1556 TTTATTTCAATA---GGCTCCTCAACAGGTTCTTCAAAAGGTAAATCATTATTAATAACATCCGGTGGATTTACTATTGTAGGTGGTAT- 1641
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
1642 TGTTTCAGTTTCAATTTCAAATCTAGGGATAATTGTTTCACGTTTAAGATCAATATTAGGTCTTCTAGGATATTCTATTTTAGGCT-CTT 1730
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
1731 TGGATTTAACAGGTATATCTTGCATTTGTA---CTG---GTATCATATCATTAATAT---CATCAGAAGGGAAATATGAGGCTTCATCTT 1811
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
1812 GAG---AAGGTTGATAATCAGCTGAAGTATCT-AAACTATATTTCACCAAAATAATATCTTTAACTACCGAATAT 1882
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 13572
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
13573 ATTGTATTTATCATGTTTATATGATCTTCTTTTAATAATGTAAAAAAGATT---TCTTTACCATTGAAATTCGATATTGATGATTTTTCT 13659
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
13660 ATATTTTGTGCTTCCATAATTGCATCGTATATTACTTTTCTTATTACTTTTTCCCATTTTGTTGTGGTTTGTTTTTTCTTAATTAAATTT 13749
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
13750 TTTTCATCTTCTTGTAATATCGT-TGTTATTATTTTAAAAGCCTTTTCGCATGCTTCTTTATCTAAATTAATACGTTC---GTTCTTATA 13835
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
13836 AATAAAAGTGTTCACAATAGGATCGGTGGTAGTAATTGATGTGTTCTTAAGAGCTTTATAAATTTTAGTTACTAT 13910
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 20508
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
20509 TTGATTATCACATATTTGTATGAAGGAATACGTAAA---CATAAACACTCATGTAGCCAC---ACATTCTATCAAGAATACTTAAAGAAT 20592
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
20593 TGCTGGGAATTTTGGTATTTGAGAGTACGTCTTCTTCTTTTGAATAAAGAGGA-TTTAGGATAGGATTAAAATAAGAGTGGGCTATACTT 20681
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
20682 TAAGTTGAGGACCTTAAGAAAATAAGCTGTTCTACAAGATGTAGTTT-ATAGCTCTAATAGCTCTGTTACTCGTTTATAATTTGTTAGAA 20770
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
20771 ACCAGGTACCCAATCAGTAATAAAGAAAAAATAGATCCATATTAATTTTTAAAGCTTTAAAAGCTTGTGCATAAA 20845
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33616
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.10
33617 CAGATACAAGAGCAACTGCTTGCGTATACTAAAACGAACCACGAGAAGTTACAAGAACTTTATAATCGTCAGGTTATATCTCATGTGCAT 33706
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
33707 CCCGAGACTACACATACAGCCTTATTTCAAACGTATGTCCAAATAACAAGTTATCATGGAAAAACAACAATTCCAAATGCTTGTCAACTA 33796
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
33797 ---AGTCGCTTAATTAATAGTATGACGAAAAATACAACATTGTACTTTAATCGTCTAATTCTCTTAATAGATTTAGAGCCTATCTTAATG 33883
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
33884 AATGGTTTTCGTTTATCAAAACTTAATATACTGACTCCCATAGCAGAGTATTATAATACTATGTTTTCCAATGCA 33958
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44821
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
44822 AAGATTTTAAATAAATCGTTAGTAGAGTTTTTAAATCAAGAGAAATCTGAAACTTTGGGATATGCTCTTTTTATATTGTGGACAGCACCT 44911
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
44912 ACATTCGATATTGTAACATATGAAACAATTAAG---TTACAGATATCTTCTGAATTACGGAAAACCATTATTAATTATCTTTTTTGT--- 44995
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
44996 ---GTTAATAATTTAACATTAATTAGTATTGGCTATCCTATTAAACGCGACGCTTTGTACAAAGCGTTTACTATAATACATGATTATATT 45082
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
45083 AATAATATTAGAGCATATGATAGTTTACCTTCTGAGTTATTTACGCGCAAACTTTTGAAAGGTGCTACAATGAAA 45157
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45073
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
45074 ATTATCATGGTTAAA------ATCACATGTAAAAAAAAAAATAAAAATATATTATATGCAAAAATCTTAATAGAAAGTTTAATAACTAAG 45157
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
45158 AATTTTAAAAATCTGATATATGAGAAGGATGCTACATC-AAGTGGCCTACAGATAATAGCGATGTTATTGGTTCAGAATCTTCTGATATT 45246
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
45247 TATCAGATAGCGATAAATTCCTTTATTTATAAAATTGAAATTCAACGTAAA---TTTTTAGAATCCTTCTTTTTAAAG---ATTTTA--- 45327
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
45328 AATAAATCGTTAGTAGAGTTTTTAAATCAAGAGAAATCTGAAACTTTGGGATATGCTCTTTTTATATTGTGGACA 45402
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47440
Protein: lcl|KC353356.1_cdsid_AGH24296.1 [gene=rpl20] [protein=ribosomal protein L20] [protein_id=AGH24296.1] [location=complement(42699..43046)] @ 0
DNA length: 690 Protein length: 115
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.23
47441 TCATATTACATTTTGGCATCTGCCACTTTATATAAGCCTCATATTTCGAATCATATCTATCCTTCAGTTTATAAACAAAAGTGGGTGAAC 47530
1 M I R V K G G V T T R K R H K K I I Q Q A T G Y R G R S K N 30
47531 AATTC-AAAATTAAGATTCAATTTGAAAGACGGAATATT---CTAAATGCAGGACATACTAAAATAAAATCTACCCCATATTGGATAATC 47616
31 N F S I A I E K V H K G L Q Y S Y A H R K V N K R F F R S L 60
47617 TTATTAAAGAGTATAACGATCTCCAGTATTGTATTGATGATCTTACATTT-GCTTTTATAATGAAATAAAAACAAAAACAAACTCTAATC 47705
61 W I Q Q L N A A C I S L N T N Y S T F I H Q L N V Q N I L I 90
47706 AAATCTGGGATATTGCAACCCTTTTACATTTCTAATAAAAGTACCTTTAAAAAGAAGAGC---TTAAGTTATTGC 47777
91 N R K I L S Q L A Q T E P Y T F K A L T H V T H Q 115
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1820
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
1821 CCGGATGTTATTAATAATGATTTACCTTTTGAAGAACCTGTTGAG---GAGCCTATTGAAATAAAAGTAGAATTTTTTAATGCT---TAT 1904
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
1905 ACGGATCTTATGAATATA------GAAGATGTAGATAGTGTAATTTCTCCAAGTTTTGAAGGCTCTCGTATTTATAGTGACGATGCAATT 1988
31 V D I G N I I V R Q R G T K I L P - F E N V G V G R D H T L 59
1989 TTTCAGTTACATTTAGATATTACTGAATTTGTTACACAAAAAATAAGGGTTTCAACAGAAGATATATCTGTAACA 2063
60 Y A L K K G I V S Y Y K D M N K K K T F - V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3598
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
3599 GGTGTTATTAAAATATCACAAGAGGCGTATCAGTCTTTTACTAAATATAAAGATAGC---TTAGGATTTAAATATTTATTA---GAATAT 3682
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
3683 CCAAAAACAGAAGAAATATTATTACGTATAAAAGAAAGGAATTTTTTTATTGCTAAAAATATGGATTCTAATCCTAATGGAATTATTGCT 3772
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L - 59
3773 TTAGCTCACCTATCACATAATACATTAATTATTCCAAACCAAACCGAGAAAAATTTATATGTTAGGGTAGGG 3844
60 Y A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4090
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
4091 ATATGGTCCGAAAATTATTACCAATATCCTTTTAATGTGGATCAAGAATTTTTACGTCAACTTTCTATTATTTTTTATAGTAATAAATTA 4180
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
4181 CAAGAACTTCAACAGGATTATAAAGAACTACAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAAGACTATAATAAGGAAATAGAT 4270
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
4271 CGCCTTAATGAATTAAAAACAAATTATTTGAAAGATAGAAAATATAAACAATATTTTAATTCATTAACA 4339
61 A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7458
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
7459 TTTTCTACATTTACAAGCGAAAAAGTTGGTCTAAAAGTAAGTGATGAGCAATTTAAAAAATTTCAAATGAAAAAACAAGGTATAGTATTT 7548
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
7549 ACTAAAGAAGAAGAATTAAAACCTCATAATAATAAATCCCAACAATTACGTTTTTTCAAAAATATACAAGTATTAGATAAAAATGAGGCT 7638
31 V D I G N I I V R Q R G T K I L P - F E N V G V G R D H T L 59
7639 TATGTAGCCAAGTTTGATCAAGACTATTTTTTTACAATGAGTCTTAATGTAAAAAAGGATTTAGTAGATAATTAT 7713
60 Y A L K K G I V S Y Y K - D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9297
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.06
9298 TGTCAAACATATAATAAAGTAAATTCTTCATTTTTTTATCAAAAAATTAAAGATGCTTATATTAACTTAACTTTACAAACAGCTCATTAT 9387
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
9388 AAAGAACAAATAGCTATTTATTTATCATTTATCTTAAAATTGATTGAAATGCACCCTCAAATACCTATT---AAAGATATGTGCTTAAAA 9474
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
9475 GCAGTCAATTATGAT---GTT---TATTTT---GACATAAATGAGCAGGATAGTTTTTATGTTACAATA 9534
61 A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9856
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.05
9857 AATAAAAATAAAAAACTACTAATTAATAAAAAACAAGAGCTTTCTAAACTATTAGATTATTTATATATCAAAGATATAAAAATGGAAATA 9946
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
9947 TTAGATTTATTTTTATTAAACTTATTTACAATAGGATTG---ATTTTTTCCTTAAGAAATCTTAATATTGGAGCAACCATAAATATTTTC 10033
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
10034 TTATTTCGACCAAGTCTTGTA---ATATTATCGCAAATTATTTCACTTTGTGTATTAATGTATGTTTTT 10099
61 A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12618
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.17
12619 TTACTTTTTATGACAATTTTTCTTTATGATGTTATTAGATATTCTATAATAATAAAAATACTTAATTACAATATATATTCT---TTTTTT 12705
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
12706 ATTCTATTGCCATTAATTTTTATATTATATTCAGCAACTAAAATTTTTACTTTGTCTAATACAGCTGAAATTGATGATTTTACAGAATAT 12795
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
12796 GTCTTTAATAAAAAATTCAATAT-TATTTCTTGGATTTTAATATCAATTCATTATTTATATTTTTAATA 12863
61 A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13701
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
13702 ATAATAACAACGATATTACAAGAAGATGAAAAAAAT---TTAATTAAGAAA---AAACAAACCACAACAAAATGGGAAAAAGTAATAAGA 13785
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
13786 AAAGTAATATACGATGCAATTATGGAAGCACAAAATATAGAAAAATCATCAATATCGAATTTCAAT---GGTAAAGAAAT-CTTTTTTAC 13871
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
13872 ATTATTAAAAGAAGATCATATAAACATGATAAATACAATAATACAAAGAAATATTGCTTATCTTTGATG 13940
61 A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13701
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
13702 ATAATAACAACGATATTACAAGAAGATGAAAAAAAT---TTAATTAAGAAA---AAACAAACCACAACAAAATGGGAAAAAGTAATAAGA 13785
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
13786 AAAGTAATATACGATGCAATTATGGAAGCACAAAATATAGAAAAATCATCAATATCGAATTTCAAT---GGTAAAGAAAT-CTTTTTTAC 13871
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
13872 ATTATTAAAAGAAGATCATATAAACATGATAAATACAATAATACAAAGAAATATTGCTTATCTTTGATG 13940
61 A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14932
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.19
14933 GCTATTTTAGCTAAAGAGATAAATGCTGCTAAACTACTTTTAAATTGCTATTATAAAGTAGTTGCTCAAAAATTTTATAATGCTCATTTT 15022
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
15023 ATAAAA---GATGCCATAATTTATCAACATTTTGAATATTTTTATCTTCCAATAGAAATAAGCGGTGTTGGTCGC------ATACTA--- 15100
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
15101 ACAGTGTCACAT---ATTTTAAGTTTTCAAACTAAC---AAGTTTGCAAGACCATTTCTTAATTATTTC 15163
61 A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14989
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.08
14990 GTAGTTGCTCAAAAATTTTATAATGCTCATTTTATA---AAAGATGCCATAATTTATCAA---CATTTTGAATATTTTTATCTTCCA--- 15070
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
15071 ATAGAAATAAGCGGTGTTGGTCGCATACTAACAGTGTCACATATTTTAAGTTTTCAAACTAACAAGTTTGCAAGACCATTTCTTAATTAT 15160
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
15161 TTCATAAAAAATAAAATTACTATGGATTTCGAAATATATGATAAAATGAAAGCACTTTTTGCAAATTAT 15229
61 A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15196
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.14
15197 TATGATAAAATGAAAGCACTTTTTGCAAATTATCTTTCAGCAGATTCTACATTACAAAATATGAGCTTTGATTTATTTGAAAAACAAACT 15286
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
15287 AAAGATTTACAGGATGAACATTTAGCAAGCTTTTTCAATAAAAGTACACCATTAATACAACATAGCTTAAGTTTTGATTAT---TTATCT 15373
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
15374 AAAATGATACACATAATTAAAAATTATGCTAAAAAACCTGGGGAGATATTAAATATTCTTAGTATTTTA 15442
61 A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16002
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.07
16003 TTGGATTTTAGAAAATATCATGGATCGGATTATAATTAAACAAAGTACAATGGCAGATCTTTACG-GA-ATGACAATAGGAGGTAGTCGT 16090
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
16091 AAATCTATTTCAAATGCGCTCATTGAAAAAATAATTGAAAAAGGA---AAATTTGAT---ATAAACCTTTCTTATATTCACATATTTTCT 16174
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
16175 GATATATTATCTAAATATTATAAATATTTTTATAAAACTAATTATTTACCTTATTGTGATACTTATTTA 16243
61 A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16342
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.08
16343 ATAAATGTTGTAAAATATTCAAAAATAACAAATGACCTTAAATCTTTGAAACGACGTATGATTAACGTAGCATATTTTACAGGAAAA--- 16429
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
16430 ATTGATCAAACTAAAATATAT---AACTCAGTTTCTGCTTTTATTATACATACAGAGGAAGCCCGATTAATGATG---TATTTTATATAT 16513
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
16514 TCCTCACAACAACTTAATAAAGCTTTACACGAAAATTTAGGTATATCTTATTATTATACTCAAAATTAT 16582
61 A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45992
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.06
45993 GAAGCGAAAATATTAATATCTGATGCCCTGGACGAATTAAACGATTCAAAATTGGCTAAGATTGGGGATAAGAAATATACTATACTAAAA 46082
1 M A T K K S G G S S R N G R D S K G R R L G - V K F F G G E 29
46083 AGAGTCCTTAAACGTTTTGAAAGTATACGTACTCGTTTATCGAAAGTTTTAAACGGCTCCGAATTTTCGGATACCATAGCCAATGACACA 46172
30 Y V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L 59
46173 GGTCATGTTAAGAAATCTATTATGAATTTAATACTTCGCAGCAAAGATCAAAAACCATTTACATCATTTAAT 46244
60 Y A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46154
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
46155 ACCATAGCCAATGACACAGGTCATGTTAAGAAATCTATTATGAATTTAATACTTCGCAGCAAAGATCAAAAACCATTTACATCATTTAAT 46244
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
46245 ATAAATATTCTAACTATAGCAAAACGTATCAAGGATTAT---GTTATTAATGATAATGATATTCTTATGAATACGGATAAAGATAAATTG 46331
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
46332 GCTCAAGCTATTGAAAGTGCTAAACTTATT---GATTTATCTAAACCTAAAAAATCTAAAAATAAAATA 46397
61 A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46712
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
46713 ATTCCAGTAACTCAAATGCCTTCAATACTCAATCCTACTCATATTGCATATATTCAACAATTAGAAGCT---TTTCAAGCAGCAACTTAT 46799
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
46800 GTTGAA---GGGAAATTTTCAGTGTTAGAG---GGTATTGAATATATACATAATAATCAACCACGATTAAATAGGGTTGAGGACACCCAT 46883
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
46884 AGTTTACAAGGTGAAAATACTTCTTATCATCTTTTTATAGAAGAATACAAGTCTTTTATTCTTGGCTTA 46952
61 A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61927
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
61928 ATTTTCCCTATGATTTATAAGGGAAATACAAAAAATTTTATTTGTAAAAAAATTACCATAAAAAATTTTATCCGTTTTTATCCAGGTCAT 62017
1 M A T K K S G G S S R N G R D S K G R - R L G V K F F G G E 29
62018 GTGAATAAAATTATCAATATTATTAATACTTCTCTA---AAAAAAGTATCACCA---CAAGCACTT---ATTGAACAAAATCGA---ATA 62095
30 Y V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L 59
62096 GAAGCT---AATAAAATGATTATTTATGCATTCTGCGAACATTTTAAAAATGATAACTTATCTGATTTATTA 62164
60 Y A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62197
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.16
62198 TTTATTCATAAACAACCAACTCTTAGTTCAAGAGCATTTCAATTAGCATTGGAAGTTTCATATTCTAAACGTTCTTTTAAC---GAA--- 62281
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
62282 GCTACTTTGCAAGATTTTTTCAAAAATGAATTTAACATTAGAGATACCTTTAATGTTAATAATGGAGTATGTGATCAAAGCACTATTTTT 62371
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
62372 TCAGCACTAATGGCTAAATATGTTGTATCTTATTAT---AATTTGAATTCAAAAGATATTATTGTTAATAGTACA 62443
61 - A L - K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 1652
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.19
1653 AATTCTACTTTTATTTCAATAGGCTCCTCA---ACAGGT---TCTTCAAAAGGTAAATCATTATTAATAACATCCGGTGGATTTACTATT 1736
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
1737 GTAGGTGGTATTGTTTCAGTTTCAATTTCAAATCTAGGGATAATTGTTTCACG-TTTAAG---ATCAATATTAGGTCTTCTAGGATATTC 1822
31 V - D I G N I I V R Q R G T K I L P F E N V G V G R D H T L 59
1823 TATTTTAGGCTCTTTGGATTTAACAGGTATATCTTGCATTTGTACTGGTATCAT---ATCATTAATATCATC 1891
60 Y A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 11431
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.08
11432 TATTCTAATAATAATTCAGGAGATTTTTTATATTCATTCACAGATAATTTTGGATACCTTTTATTTTTA---ATAAAAGATATTATTTTA 11518
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
11519 ATTGTTAAAAATAACACTATAATTAAAATTAGAATGTTTAACATATTTAAATTTTTAAAAGGGAAAAACATTAATTCTCATTCTAAACAT 11608
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
11609 CGTTTTATGAAGAAAATCAAGTATTTTAATAAGAATATTACGTTATCTTGTGGA---CCATCAATAGAT 11674
61 A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33829
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.14
33830 CTTAGCAAGAAGCAAAGTCAAAGAACCTCTCCGAAT---AAAAAAAGCTTATCACAACCGAAAAGGTATCAACTA---GATTCCTTGCAT 33913
1 M A T K K S G G S S R N G R D S K G R R L G V K F F G G E Y 30
33914 GTA---ATACAAAATAAATTGAATCCACAGATACAAGAGCAACTGCTTGCGTATACTAAAACGAACCACGAGAAGTTACAAGAACTTTAT 34000
31 V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L Y 60
34001 AAT---CGTCAGGTTATATCTCATGTGCATCCCGAGACTACACATACAGCCTTATTTCAAACGTATGTC 34066
61 A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45088
Protein: lcl|KC353356.1_cdsid_AGH24297.1 [gene=rpl27] [protein=ribosomal protein L27] [protein_id=AGH24297.1] [location=43199..43450] @ 0
DNA length: 498 Protein length: 83
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.05
45089 TTAATAACTAAGAATTTTAAAAATCTGATATATGAGAAGGATGCTACATCAAGTGGCCTACAGATAATAGCGATGTTATT-GGTTCAGAA 45177
1 M A T K K - S G G S S R N G R D S K G R R L G V K F F G G E 29
45178 TCTTCTGATATTTATCAGATAGCGATAAATTCCTTTATTTATAAAATT---GAAATTCAACGTAAATTTTTA---GAATCCTTCTTTTTA 45261
30 Y V D I G N I I V R Q R G T K I L P F E N V G V G R D H T L 59
45262 AAGATTTTAAATAAATCGTTAGTAGAGTTTTTA---AATCAAGAGAAATCTGAAACTTTGGGATATGCTCTT 45330
60 Y A L K K G I V S Y Y K D M N K K K T F V S V I 83
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
17 GTTAACTATTCTACAAATGAATATAACAATATTAAACTAGATCCT---GGAACGCTCACAGATGTTAAAACAAGAAAAGCTATTGCTTCA 103
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
104 ATGACTGAATGGAATCCCTTCTTAAGAGATAAGGTT 139
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 410
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
411 GATAAATATATGTATCATAACGTTATATATATTTACTTTTGTTATAGGTATATTTTATCTTAGATATATAAATATAACAAAAAAAGTAGA 500
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
501 CTTAAAAATTTATTATATAATGCTAAAAAATCTTTT 536
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1140
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.48
1141 TTAAAATATATAAACGAAGAAACATTAATGATAGATGATGAACCACATGAT---ATGTCTTTTTACCAAGAT---ATAAACGAACATTAT 1224
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
1225 ATAAAACGAGGTTTTGTTAAAGATCCAAATAATATA 1260
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1140
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.48
1141 TTAAAATATATAAACGAAGAAACATTAATGATAGATGATGAACCACATGAT---ATGTCTTTTTACCAAGAT---ATAAACGAACATTAT 1224
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
1225 ATAAAACGAGGTTTTGTTAAAGATCCAAATAATATA 1260
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1436
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
1437 TTATTAAAAACATTG---CCTTCA---ATA---AAGATTATTCATAATTATTTTCTGTATAAAAGTAGTTATTTATATGAAGCTGGTTCA 1517
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
1518 ATATGTAAATCTTTATATAAAATAATGCCGACAACT 1553
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2329
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
2330 TATTGTAACACGTTTTACAAAACAATGATCTTATATCAGAAAATTCAACATACTAATTTTTTTACAAATAAAATTTCTTATAGTAATTTT 2419
1 M K R T F Q P S T I V - K K R K H G F L S R N K T K T G K A 29
2420 ATCCGTTTTTATCCTGGCAATTTAGGGAAAACACAACCA 2458
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2473
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.40
2474 ATGCCTGAGAGTAAAACACCTCAAGAAATTACAAAATATTTTCCATCAGGTACAACATTACAAGATCTTGAAGAAGTTGCACAAGATGTA 2563
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
2564 ATGTATCCCAAAGAAATGTCTAGTATTCCTACTGAA 2599
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2540
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.21
2541 TTGAAGAAGTTGCACAAGATGTAATGTATCCCAAAGAAATGTCTAGTATTCCTACTGAAAAAAGTGAAGAACCAATTAAATCTGCAGCAG 2630
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
2631 TTAAAGAAGAAGAAAAAAAAATAATAGAAAAACTTA 2666
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2653
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
2654 ATAGAAAAACTTATAGAAGCTGATACTATAGCGGAAAAAATACAAGGTAATTCTCATATTTTTAATCCATTAAGATTAGTTTATAACACC 2743
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
2744 AGTAGTAAAGTATGGAATTACCTAAAAAAAAATGTT 2779
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2806
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.29
2807 GATAATTATACAGTG---CCTATTACAGCCGTTTATGATACAAAACAAGGATCA---TCCGATATTCAATATAATTTAGAAAAAATAATT 2890
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
2891 AAAGATTTGAAAATAGCTATACAGGAAAAATCTTTG 2926
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2959
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.33
2960 ATTCGTAAAAATTATGTTACTAAAGGGGTTAGTATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAGTCTTATGATTTTCAATATGAA 3049
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
3050 CCTTTAAAACAAATTTGTAAAATTAAAAAAGATATT 3085
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3145
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 36 Length-adjusted: 0.86
3146 TTGAAAAATTTAGAAGAAAAAATGTCAATAGCTCTTAAAAATATAAATAATTTTCTTGAAAAAAATAAAGATTATACT---AAAGAATTT 3232
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
3233 CTTGAAGCAAAAGAATTACAAGAATGGTATGATTAT 3268
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3154
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.21
3155 TTAGAAGAAAAAATG------TCA---ATAGCTCTTAAAAATATAAATAATTTTCTTGAAAAAAATAAAGATTATACT---AAAGAATTT 3232
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
3233 CTTGAAGCAAAAGAATTACAAGAATGGTATGATTAT 3268
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3373
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.40
3374 CAAGAAAAAAATAGTAGTTATTTGACACCTCTGAAAAAAAATAGTGCTTTACCTATTAATTTACAAAATGAAAAATCAGCTAAATGTTA- 3462
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
3463 CTTGCCAAAAGATTATGTTATGGAAATAACAAATAT 3498
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3574
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.31
3575 TCGGCAGTTACTATAGATACAGAAGGTGTTATTAAAATATCACAAGAGGCGTATCAGTCTTTTACTAAATATAAAGATAGCTTAGG-ATT 3663
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
3664 TAAATATTTATTAGAATATCCAAAAACAGAAGAAATATT 3702
31 - L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3679
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.43
3680 TATCCAAAAACAGAAGAAATATTATTACGTATAAAAGAAAGGAATTTT---TTTATTGCTAAAAATATGGATTCTAATCCTAATGGAATT 3766
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
3767 ATTGCTTTAGCTCACCTATCACATAATACATTAATT 3802
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3844
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
3845 CTTGTTACTAGTACTAAAAGTGATTCTAATATTAAAATTGATAGTTATCAAGTTACTAATGAGGATTCTAATAAACAAAATAAAGATCAA 3934
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
3935 ATG---TTTCGTATTTTTCCTACTTTTTTAATTGTA 3967
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3964
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
3965 GTAGATGAGAAAATTGAGCCCTTAATAGTAAATCTTGAAATGACGTTGTATTTTTATGGCAAAAAT---ACAGATAAT---AAAAGTATT 4048
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
4049 GTAGAAGAAATCATATTTACGCAATATGATTTAACA 4084
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4139
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.21
4140 TTTTACGTCAACTTTCTATTATTTTTTATAGTAATAAATTACAAGAAC---TTC---AACAGGATT---ATAAAGAACTACAAGATAAAT 4220
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
4221 TATATTCACTTCTTATTAAAAGTCACGAAGACTATA 4256
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4177
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
4178 TTACAAGAACTTCAACAGGATTATAAAGAACTACAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAAGACTATAATAAGGAAATA 4267
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
4268 GATCGCCTTAATGAATTAAAA---ACAAATTATTTG 4300
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4348
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.43
4349 CAAAAATTAGTTTCTCATATAAAAATTTTTCAAGATAAGATTAAAGATGATAATATA---CAAAATGAAAAAAAACAAAAGAAAGAACTT 4435
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
4436 ATTAATCAACTTTTGGAAAAAAATAAAAAAGGAAAA 4471
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4420
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 26 Length-adjusted: 0.62
4421 CAAAAGAAAGAACTTATT---AATCAACTTTTGGAAAAAAATAAAAAAGGAAAAGATAAAGAAGAAGGAACAGAAATTTTAACTGCAAAA 4507
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
4508 CAAAAAAAGGAGAAATATCTAAAGGATAAACAAAATATA 4546
31 L K R - R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4556
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
4557 ATGAAAAGAATAATTGATTATTTTTTAATAATATATTATTATTTATTATTATTTATAGGTCTAATAATGACA---TCTTGG------ATA 4637
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
4638 ATTTGGAGTAGATTTATTCGATCTCGT---ACTATT 4670
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5117
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.29
5118 ATTGTAGAATTGGAAAATAAATATTCGTTAGTAAGAATTTATGAAGTTGGATATAAATTTGATGATTCTCGTAAAAAAAATACAAAAGCT 5207
1 M K R T F Q P S T I V K K R K H G F - L S R N K T K T G K A 29
5208 ATTTATCATGATGAAGAAAAAACAATACGGGAATATATA 5246
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5288
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.52
5289 GTTGATTATGAGTATGAATCAACTCCTTATTGTAAAAGTGAAGTCTATAATGAATATTGTTTAAATAAATATAAAAATAAAAAAGCTCTT 5378
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
5379 TATACAAGTGAAGATTTAGATATTTTGAGAGCCTTA 5414
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5295
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.21
5296 ATGAGTATGAAT---CAA---CTCCTTATTGTAAAAGTGAAGTCTAT-AATGAATATTGTTTAAATAAATATAAAAATAAAAAAGCTCTT 5378
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
5379 TATACAAGTGAAGATTTAGATATTTTGAGAGCCTTA 5414
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5615
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
5616 ATGTTATATTTGGTGAAAGAAGAAAATCCATTTATGGATTTCGATAGCGGT------TCACATAATAAAAATCTATTAACAATAGAAAAT 5699
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
5700 ATTAAAAAGATATTATGCAAGATTATAAAAAATATT 5735
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5947
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
5948 ATAGTAGAAACATTTATGGATAATTTAATGCTGGAAGAATTATATATTAAATACCTTGCAAAAGATGAA---AAAGATTATGAAGGTTTT 6034
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
6035 ATGAAAGAA---ATTCAATCATTATTAAAGGATTAT 6067
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6298
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
6299 ATTTTAACAACATTTTAT---GATGAAATACAAAAAAAACAAAAGAAAGATGA-TTAATAAGA---AAACACAAATTCAAAAAAATAATT 6381
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
6382 ATTTAATAACGAGTAAGTATGATGCGAACTTTAATA 6417
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6390
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.21
6391 ---CGAGTAAGTATGATGCGAACTTTAATACTTAATAAAAAAATAAATAGCTTTCTGTATCTTTGTAAGCCGATAGTCATTCAA---ATA 6474
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
6475 TCTAAGCGT---TTTTATCCCACTGATAAAAAAATA 6507
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6438
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.60
6439 TTTCTGTATCTTTGTAAGCCG---ATAGTCATTCAAATATCTAAGCGTTTTTATCCCACTGATAAAAAAATAGGTCATGCTAAAAAATTG 6525
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
6526 CTTGATCACCGTTCAATGTCTTTTTCTAAAAGAATT 6561
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6564
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 26 Length-adjusted: 0.62
6565 AATCCACAATGTCGTAAATTGCGTCAACAATGTAAACAGCATCATAATAAATATATTACTGATACAAAAATACAAACTAGACATAGAGGT 6654
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
6655 TTAAGCAATAGAGAATTACAAGGTATTCGATCTCCA 6690
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6729
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 42 Length-adjusted: 1.00
6730 ATGAAAAATCCTTTTCAAAACTCACAAAAAGTGTCAGAA---CCTTTTTCACCTCTTACA---AGTATAACTAAAACCTGTAAAACAACA 6813
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
6814 TTTAAATCCTTTATTAAAAAAGATTCATTATCAATT 6849
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6804
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
6805 ---AAAACAACATTTAAA---TCC---TTTATTAAAAAAGATTCATTATCAATTGCCTCT---AACCAAATACCATTGCCTGAGAGTATA 6882
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
6883 ---AATAACACAATAAGTCACGAAAATCAAAATATA 6915
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7065
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
7066 CCAGACGGTGTTATATATACTACTAATATTACTGAAAAAACAAGTATGGAAGAATTAACCAAGCAGCAACTT---ATTGATGAA---TTA 7149
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
7150 AAAAAACGTAACTTGATAAAAATAACAAAATCT--- 7182
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7164
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.48
7165 ATAAAAATAACAAAATCTCCTGCAGTTATTATTGAAACAGAAAGTGATGGTCATATA---CGTATTGGTAATAAAGATAATGATTTAATA 7251
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
7252 TTTACGAAACACGGG---CGAGCGTATTTAGAATTA 7284
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7416
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
7417 ATGATAGCAGCTTATGATCCTACTAATACTCATTTGTACGCATTTTCTACATTTACAAGCGAAAAAGTTGGTCTAAAAGTAAGTGATGAG 7506
1 M K R T F Q P S T I V K K R K H G F L S - R N K T K T G K A 29
7507 CAATTTAAAAAATTTCAAATGAAA---AAACAAGGTATA 7542
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7488
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.38
7489 CTAAAAGTAAGTGATGAGCAATTTAAAAAATTTCAAATGAAAAAACAAGGTATAGTATTTACTAAAGAAGAAGAATTAAAACCTCATAAT 7578
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
7579 AATAAATCCCAACAATTACGTTTTTTCAAAAATATA 7614
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7656
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
7657 CAAGACTATTTTTTTACAATGAGTCTTAATGTAAAAAAGGATTTAGTAGATAATTATAATAACTTAAAAACTAAACATTATGAGAAATAT 7746
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
7747 ATGCCACAAACAATA---TCAAATGAACAATTATTA 7779
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7782
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.43
7783 ATGTGCAAAGATGTTGACAAAGAAGCTCAAAAAAAAAAACCTAAACACCCTATGACTCTTGAACAACAGCAAAAAAAAGAAGTTGAAAAA 7872
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
7873 CAGAAAAATCAATTATTTCAACTACAAAATAAAAAA 7908
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7833
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
7834 ATGACTCTTGAACAACAGCAAAAAAAAGAAGTTGAAAAACAGAAAAATCAATT-ATTTCAACTACAAAATAAAAAATGATAGAT---ATT 7919
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
7920 ATTTCAAGGATAATAAATTTAATAATTAAAAATATA 7955
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8198
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
8199 TATACGAAACAATTTAATCTTATTTCCAATACCTATATAAAAATATTTACCTATATAGCA---AATAAAATTAATTATTATAATGTCATT 8285
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
8286 TTATGGGAAAAAATCTTACTTATTATAAATACTGTA 8321
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8498
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
8499 GTATGGACAACATATAAACCAAATGTCTTACCTCCTGAATTAGATTTTTGGCATCCTGATTATAATGAGGATGATGATGATGAATGTATT 8588
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
8589 CCGCCTAATGATATGGAGATCTCTTTTAGAACATTT 8624
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8705
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
8706 TATAATAATTTATTTAAAGAATATAATGTTACCTGGAAATCTTGTGGAGATATAAAAAACACCATTATCGAAAAGGATCTTAATTTAATA 8795
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
8796 ATTAGATTAAAAAGTATTATAACAACACATGAGATA 8831
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8888
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
8889 ATAGGATATTTAATATGCTGGGCTTATATATTATACGTAAGTTTATCAAATTTTAAAGATTTTTATATGTTATCATGTATAATTGAAGTG 8978
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
8979 ATAAAAACTCATCTTCTACAAGGTAAAGTCCCACTA 9014
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9114
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
9115 AAAGAAAGGAATATGCAAAATTACAGAAAATCTTCTTATTCAAAAAAACTACTTTATACAATATACATTCCAAAAATATCAGGAGTTACT 9204
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
9205 CTACCCGAATATCCTTTAAAAGATGTTCAAAAAGCT 9240
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9556
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
9557 TTGAAATTAGTCTTCAACATGATAATATTTGTTTGCACACTTTCCATTTATTACTTATTGAAGAAATATTTCTACAAAACTTTCAAGATA 9646
1 M K R T F Q P S T I V K K R K - H G F L S R N K T K T G K A 29
9647 ATATTGAACCATTTTCTGATCTCTTACTTAAAGATGAAA 9685
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9616
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.31
9617 AAGAAATATTTCTACAAAACTTTCAAGATAATATTGAACCATTTTCT-GATCTCTTACTTAAAGATGAAAATGAAAGTAATAAA---TTT 9702
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
9703 TATAAACAAAAAATGTTATTAATAAAAGATACTTAT 9738
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9817
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
9818 CTAAGTTTATGTTTTGCAATTATTATACATTATAATTATAATAAAAATAAAAAACTACTAATTAATAAAAAACAAGAGCTTTCTAAACTA 9907
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
9908 TTAGATTATTTATATATCAAAGATATAAAAATGGAA 9943
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10219
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
10220 TTATACGATAACTTACATGATTTTATTTATATTAAACTAAAACCAATTAATAAAATAAACTCTTCTTATTTACAAGTGCTAATGATAATA 10309
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
10310 CTATGCAATAAGATCTTGTACATATATGCTTATATA 10345
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10360
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.31
10361 ATTTTACGAGCATTTTTTCCTGAAATTTTATTATTTATAAGTTTGATATCTGATTTAAATAATAGAGAAATAAAAACATTTTATTATATC 10450
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
10451 TTAGCTATATACCCATTAATGACATCTTATAGGACCATT 10489
31 L K - R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10534
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
10535 TTAACTACATATTTTTATGAAGATAAAATACACGATAAATTGAGAAAAACAATAAGTGAATATGAACGTACTAGAATATTAATACAAAGT 10624
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
10625 ATGACTCTTTATTAT---AAATATGATAAACAGATA 10657
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11074
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
11075 CGTACATCAACCTTTTTAAATACAATAATGTCTGATAAAAACTATTATGAAAATTTATTATTATCCCTAGATATTAATACAATTAAAGTA 11164
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
11165 TTGGCAAAAGAATTACTTACAATTGCTATTATAGTA 11200
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11573
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 28 Length-adjusted: 0.67
11574 TTATTTTTAACAATTAAAATAATATCTTTTATTAAAAATAAAAGGTATCCAAAATTATCTGTGAATGAATATAAAAAATCTCCTGAATTA 11663
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
11664 TTATTAGAATATTTAAATAAATATTATGTAACTAAC 11699
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11832
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
11833 TTTAGTCGATTGTTATTTATGAGCATTTTAATTATAATTGTTATTTATAATTTTTATAAACTTTTGGATATTATTTTTTTTGATGAAATT 11922
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
11923 TTAAAACTATATCTCTATTTTTTTAGGCATAAATTT 11958
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12336
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
12337 ATAATTAATGTAATATATAAATATTATATTTTTGAGAAAAAAAAAGAT---TTTATGTTTGATGGCTTGCTTAATAAAAATTTTTATAAT 12423
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
12424 GTACAATATTTTATATTTGCTAATAACAAAAGTACT 12459
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12405
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
12406 AATAAAAATTTTTATAATGTACAATATTTTATATTTGCTAATAACAAAAGTACTTTAAACATG---AAAACCAATATAGATTATTTATAT 12492
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
12493 TTTATGGAAAAATTA---AAAGAAGAAACTACTATT 12525
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12495
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
12496 ATGGAAAAA---TTAAAAGAAGAAACTACTATTAAATATATTTTAAATGATTTTGAACAAGTACCAGAAGAGTTAGTCAATAAACAAATA 12582
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
12583 AATCAAATGTACTTACGTTTTAGTATAATACTAATA 12618
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12872
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
12873 CCAAAATTTATTTTTATGGAAACCGAAATTTTATTTAATCTACCATATAGTATAGTAACTATAACTCAAATATATACTTCTCAAGAAAAA 12962
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
12963 ATTATGTAT---TTGTTTCATATTTCGAATACTGTT 12995
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13314
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.31
13315 GTAGAAGGTATTTATCTTACTGTAAAAATTATTTATGAA---AAA---GGTTTGCTTAATAAGATGACTGA-AACACAATTAAAAACATT 13397
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
13398 ATTAGATATCATTTGGAAAAAAATAACAAGGAAATG 13433
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13385
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
13386 ATTAAAAACATTATTAGATATCATTTGGAAAAAAATAACAAGGAAAT-GATCTTATATCAAAAAATAAAAATCATATG---TAT---CTT 13468
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
13469 TATAAAAAAAAATTACTATAAGATAAACATAATCAA 13504
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13545
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
13546 TCTAAATTCCAAATAATAGCATACGATATAGTAACTAAAATTTATAAAGCTCTTAAGAACACATCAATTACTACCACCGATCCT---ATT 13632
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
13633 GTGAACACTTTTATTTATAAGAACGAACGT---ATT 13665
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13683
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.33
13684 TGCGAAAAGGCTTTTAAAATAATAACAACGATATTACAAGAAGATGAAAAAAATTTAATTAAGAAAAAACAAACCACAACAAAATGGGAA 13773
1 M K R T F Q - P S T I V K K R K H G F L S R N K T K T G K A 29
13774 AAAGTAATAAGAAAAGTAATATACGATGCAATTATGGAA 13812
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13844
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
13845 TTTCAATGGTAAAGAAATCTTTTTTACATTATTAAAAGAAGATCATATAAACATGATAAATACAATAATACAAAGAAATATTGCTTATCT 13934
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
13935 TTGATGGAAAGAGTATGGACAACATTTCAAGATAAA 13970
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14167
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.31
14168 TGGAATAAAGAAAACAATCCAGATGATTTATTAGAACAAACAGGC---GCCTTTGCAGTAAGAATAGGTTCTTATCTTATTGAATATTTG 14254
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
14255 ATAAAACATAACATTTTTAAAGAATCGAGTACTGCT 14290
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14347
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
14348 ACATCTAATCTTTTTGTTAAACCAATTTTATACCCAGAAATGTCTTATGAATTTGAATCTAAAATCGAGCGCAAAAGTTTTTCATTTAAA 14437
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
14438 CTATTAAAGAAACAAGAGCAGGCTAAAATACCAAAA 14473
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14386
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.26
14387 ATGTCTTATGAATTTGAA---TCTAAAATC---GAGCGCAAAAGTTTTTCATTTAAACTATTAAAGAAACAAGAGCAGGCTAAA---ATA 14467
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
14468 CCAAAATTCACTTATAAAAAAACATCTAAATTAAAT 14503
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14674
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
14675 ATAAATAATCTTTTATCTAATTGTAATATAAATCATGTAAAAGATTTTCTAGTATTTATAGGTAATCATAACAAATTATTTGATAATCAC 14764
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
14765 TTATGCAAAAAACTAATTCTTACAAAAAAACAATAT 14800
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14848
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.57
14849 CATAAAAAAACTAGTAGTATTCATACTCTTGATCAATACATTCAACATGAT---TTGAATAAAAATGAACAGAGTACTAAAGACTTAGCT 14935
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
14936 ATTTTAGCTAAAGAGATAAATGCTGCTAAACTACTT 14971
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15010
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
15011 AATGCTCATTTTATAAAAGATGCCATAATTTATCAACATTTTGAATATTTTTATCTTCCAATAGAAATAAGCGGTGTTGGTCGCATACTA 15100
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
15101 ACAGTGTCACATATTTTAAGTTTTCAAACTAACAAG 15136
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15218
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
15219 TTGCAAATTATCTTTCAGCA-GATTCTACATTACAAAATATGAGCTTTGATTTATTTGAAAAACAAACTAAAGATTTACAGGATGAACAT 15307
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
15308 TTAGCAAGCTTTTTCAATAAAAGTACACCATTAATA 15343
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15523
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
15524 TTAGCAACAATATTTAAAAATAAATTAGCAGCTAAAAATAGTTGTTTAATTTCTACAGATGAAACTAAATTTGACTTAAATATTAATTGC 15613
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
15614 CTTGAAAAATTTCAGCTATTTATTACAAAAGCATTA 15649
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15811
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.26
15812 TATGAAGTGACTCCTTGTGCAATTTCCGATACTTATTCTTTTCCTGATTCTTTTATGCAAGAATGTAAATGTATAATATCAGATAAAGTT 15901
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
15902 TTAATGAAG---ATATCAAAGAAAAAGAAAACTATT 15934
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15904
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
15905 ATGAAGATATCAAAGAAAAAGAAAACTATTGTATTTTTAAAAAAACTATTAATAGTTTTTTATGATTATGCT---ATAAATAAA---ATA 15988
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
15989 AATAAAAA-AGAACCTTGGATTTTAGAAAATATCAT 16023
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16021
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.52
16022 ATGGATCGGATTATAATTAAACAAAGTACAATGGCAGATCTTTACGGAATGACAATAGGAGGTAGTCGTAAATCTATTTCAAATGCGCTC 16111
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
16112 ATTGAAAAAATAATTGAAAAAGGAAAATTTGATATA 16147
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16150
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
16151 CTTTCTTATATTCACATATTTTCTGATATATTATCTAAATATTATAAATATTTTTATAAAACTAATTATTTACCTTATTGTGATACTTAT 16240
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
16241 TTAACATTACGAGAATTTCTAAAGAAAATGGAAGGTCCT 16279
31 L K - R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16285
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.60
16286 ATGTCAACAGAATTTTTAACATGGTCATAT---AATCCAAGAAAAATGAAAATATTACGTATAAATGTTGTAAAATATTCAAAAATAACA 16372
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
16373 AATGACCTTAAATCTTTGAAA---CGACGTATGATT 16405
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16402
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
16403 ATTAACGTAGCATATTTTACAGGAAAAATTGATCAAACTAAAATATATAACTCAGTTTCTGCTTTTATTATACATACAGAGGAAGCCCGA 16492
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
16493 TTAATGATGTATTTTATATATTCCTCACAACAACTT 16528
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16630
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
16631 TTAAAATTAAATTATAAAACTTGTTATACTCATGAATTATTTCCTTCTCTTTTTAAAATTCTCAATACAACAGATCCTCATTATCTCACA 16720
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
16721 TTTGCACAGCTTCTCTTTGATCTTAATAAATCTCCT 16756
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17145
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
17146 CAAAAACGGTCCATGGTTTTAAAGTCTATTTGGAGGAGTTTAAAAAAAGTCAATCTTGTTAAAGTAAAAGTTCACACTTAAAATGGTTTG 17235
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
17236 TTAACTAAA---TTTAATAAA---TTAAAATGTTTT 17265
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17629
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
17630 ACTTATTATGTTTTTAGGATGGGAAGCTGTGGATTAGCTTCTTATTTCTTATTAATTTCTGGATACAAGAAATCAAGCAATCAGTCTGCT 17719
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
17720 ATTAAAGCA---ATTATTTTTAATCGTGAGGTGATG 17752
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 19211
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
19212 GTAATTAAACTATACCAAGTAAATAAGTTA---AAAACAATTAAGTTTAAT---CTGCCAAAACATCAAATTATTACCCTTAAGACAATT 19295
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
19296 ---AAAAATGGGTGCTTTAACTTTAAACATAAGCAA 19328
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 19330
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.29
19331 CACTTTCGAGTTTGGGAACCACAAACATTATTGAAATAGATGAAACGAGGTTTCTAAATATAACTTAAGATGGAACATTTAAAAACTAAG 19420
1 M K R T F Q P S T I V K K R K H G F - - - L S R N K T K T G 27
19421 GATCTCGTATTTTACAATTAATTATTGGATGGCAGATAAAAAACGTTT 19468
28 K A V L K R R L L K G R - K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 19921
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
19922 ATGATTTTCAAATGTCACAATAGTACATCATGTTTTAATACTTTATATTTCCTTATAAT-GATAATATTATTTCTTTAAACCGCTATATA 20010
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
20011 TTAATAAAACGATCAATATTTACTTAAAGAAAAACAATA 20049
31 L - K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 20189
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
20190 TTTAGAACGCTATTTTTGTTATATTTAATTATTAAACTAAACAAA---TCAACTCTTAGT---TCTTCTTGCAAATACAACAACACTACC 20273
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
20274 ---AAATATGATTTATACTATTATCACAAACGATTA 20306
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 20633
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.21
20634 TCTTGTAGAACAGCTTATTTTCTTAAGGTCCTCAACTTAAAGTATAGCCCACTCTTATTTTAATCCTATCCTAAATCCTCTTTATTCAAA 20723
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
20724 AGAAGAAGACGTACTCTCAAATACCAAAATTCCCAG 20759
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 20679
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.33
20680 GCCCACTCTTATTTTAATCCTATCCTAAATCCTCTTTATTCAAAAGAAGAAGACGTACTCTCAAATACCAAAATTCCCAGCAATTCTTTA 20769
1 M K R T F Q P - S T I V K K R K H G F L S R N K T K T G K A 29
20770 AGTATTCTTGATAGAATGTGT---GGCTACATGAGTGTT 20805
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 21083
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
21084 TTCACAAAAAAA---CAAAATCATATCATTTGTTTTAACAGAAAAAGG---GTCTTATCGTTAATTAAAAT-AAAACGGAACGCATTTAT 21166
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
21167 TATCGTTTAAGACGATTAGATTTATTAAAAAACAGG 21202
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 21331
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
21332 ATAAAATAATTCGTATCAATTATGGCTATCATTAAATGGCTTAAAAAAACTTATAACGTATATTATGGCAAAAAAAACATCGTAGACGAC 21421
1 M K R T F Q P S T I V K K R K H G F - L S R N K T K T G K A 29
21422 GGGTTAAAGAAATATATATTTAAGACGCGTTTGCTTTTT 21460
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22113
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
22114 TATTTTAAATCGTGAGAAAAAAATAAAGCAATCGCCGTGAAAAGTCAAGAC---ATTACACAAAATGATAAAAAATTAATGAAAGAATCT 22200
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
22201 TTACAAAGC---TTTCTGAAAATTTTCTCAAAATTA 22233
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22656
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
22657 ATAGCTAAAGATTTCCTACGAGTTATATTGATATGCTATAGATCAAGACCTTTT---AGTAGATTTATAAGAAAAAACGGTTTAATGTTT 22743
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
22744 CAAGTCAAAAAGAACTATTATGCCTCACGCTTTGAGAAA 22782
31 - L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22707
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.26
22708 TTTAGTAGATTTATAAGAAAAAACGGTTTAATGTTTCAAGTCAAAAAGAACTATTATGCCTCACGCTTTGAGAAAATACGTGAATCTGTA 22797
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
22798 ------CGTGT-ACCTTAAGATCTCGTAAATATATA 22826
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22884
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 29 Length-adjusted: 0.69
22885 AAAAAAAAAAGATATAAAAAATCT---TTTAAAAAAGTAAGAAAAAATAATAATATAAAAAGTAATAAA---AAATTTAAAAAATCTAAA 22968
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
22969 CGTCATACTCGTATATCAAAAAAAATAAAA---ATA 23001
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 23046
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
23047 ATATTTACAAACTATAAAAAAAGTAATAAAATACAATCAAGAATTAAACT-TTAAGTTGTCGTTTAAAAAGTAAAGGTGGTGTTTTAATG 23135
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
23136 GACAAATAATCATCCACGTGTGGTGATTACAGTAAA 23171
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 23813
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.21
23814 ATTAAAGAATCT---TCTATAAAGCTCTTGATGAAAATATTAAAGAGAACATAAACCAGT---AATAAAACAAAAAGTCGATCTAGTACT 23897
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
23898 ATATAAACCCTTTTGTTGGAAAGT---AATAGTGTT 23930
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24021
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.29
24022 CTACATAATAGTGAACATAATGTAAAAAA-ATAGCGAAAATGAAGCGAAAAATACTCAGAAAAAAGTACGTAAAACAGTTGTCAAAACAG 24110
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
24111 TTAAAAAAC---CTACTAAAA---AGAAAAAATAAT 24140
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24406
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
24407 TTAAAAATTATGTTTAATATTATTGCTTATTTAAAAAAC---AAATTTACTTTCCTATCAGATTTATCAATTTATCAAATTTCAATTATA 24493
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
24494 TCATTGGTACAATTTTATCATACACATTATAATTAT 24529
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24979
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
24980 ACTACTTCATCTTCATCTGAATCTTCTGCTTCTACTTCATCAGCTTCTTCTTTTGCTTCATCATCTGAATCTTCTTCTAGTACTGACTCT 25069
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
25070 GAAGAAGAGTTGGATCTAAAAGATCAGGTGAATCTC 25105
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 25232
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
25233 CTGAGCAGGAACTTTCTTCT-TCTACTTCTGAAATTAGTCTTTTACTGGATGCTATTAATTATCAAGTAGAACGAACTCATCCTGAAGAT 25321
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
25322 CTCCATACA---GTACTTGCACTTAAATCCTCAATT 25354
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 26150
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.40
26151 GGAAGAAGTAAGATTAACACCAATGAAGTAGTAATGAAATGTAAATACCAGCTGTTTCAAATAACTAAAATCAGTACGACATAAGGAATT 26240
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
26241 TTTTTTCGTAATTCA---AAGGATTATAAACAAATT 26273
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 26322
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
26323 ATAAAAAGCAGC---AAAAGCAGCAAAACTGCTCCCATAGATAAACATAATGAAAATGAGCTACAACATAATAGTATCATGGAAAGCATA 26409
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
26410 TCAAGACCAGAATTAGCTAACAACTCCACTAAGACC 26445
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 26425
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
26426 CTAACAACTCCACTAAGACCACCTAATGTAAACAAAATAAGAAAACCTAAGATGAATAGTAAAGGA---GTACGTAA-TTTAAGATAAGA 26511
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
26512 ACCAAATA-AGGTTGCTAACC---ACTAAAAATCTT 26543
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 27091
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
27092 CAGTCCAACCAGTTCCAGCA-CCATTTCAACATAAGAAGATAAAAGAAGTAAAATTAAAGAGG---AAGGTAATAACCATAAACTATATT 27177
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
27178 ATTTAAACGAGGAAATGCCATATCAGGAGCACCTAT 27213
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 27091
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
27092 CAGTCCAACCAGTTCCAGCA-CCATTTCAACATAAGAAGATAAAAGAAGTAAAATTAAAGAGG---AAGGTAATAACCATAAACTATATT 27177
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
27178 ATTTAAACGAGGAAATGCCATATCAGGAGCACCTAT 27213
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 27230
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
27231 ATTTCCAAACCCACCAATTAAAGCAGCATCACAAAGAAA---AAAATCATAATAAGGCATGAGCAGTTACAATGTATTATAAAGTTGATA 27317
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
27318 ATTAAATTTAAAATT---AAATCACCACAACTGCTA 27350
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 28067
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 31 Length-adjusted: 0.74
28068 ATAACAATCTCCTTCAAACCTACAGGTATTTTAAAATTAAATTCTTATAATTTTCATAATTATAAATTTTACGGAATCATAAGGTATACC 28157
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
28158 CTACCTCGAACCATAACACCAGAAAAAGCATATCTT 28193
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 28320
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
28321 ACCAATAGGCATCATATGCTACTCCTCCTGGTCGAATGTATGCTGTATGCATTCTTGCACCGATAC---ACGTTCATA---AAATTCATC 28404
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
28405 AATTTTTCTCGCTCTTCAAAAGCCCAGAAATGGTGT 28440
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 29107
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
29108 AACAGCATCACTTTTAAACCTAAAAAGGGACAGCAAAAGCATGATAACATCTTTAGAAGTATAAGTAATCTACATTAGTTTCAACAGTAC 29197
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
29198 ---AAATAAAGGATTATCACAGTTAATAAACGAGTT 29230
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 29107
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
29108 AACAGCATCACTTTTAAACCTAAAAAGGGACAGCAAAAGCATGATAACATCTTTAGAAGTATAAGTAATCTACATTAGTTTCAACAGTAC 29197
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
29198 ---AAATAAAGGATTATCACAGTTAATAAACGAGTT 29230
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 29698
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.52
29699 TTATTGAAAGTATATTTCCCAAAAAGTATTATAAAAATATTACAAAAATT-TTGCTTAATAA-AATAAAAATAAGTTAAATGAAAAAAAG 29786
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
29787 ATATGGACTGAATCTATCATTGGGAAGAATTCTTCT 29822
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 31492
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
31493 ATAAATTACATCTATAAGTTGAGTTATATTATTTACTACCGATATTATTATCTTATTTATAGGTACTGTCTTTGCTTTAAAGCAACTAA- 31581
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
31582 TTAAAAACATTCCTAGCTTATAGCGCATTGCAAATA 31617
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34905
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
34906 TTAGGTCTTAATGTAAGAAAATTAAAAATGCGATAGCTTAGGAGCTTCGATTATATTTCTGTTTATAAACTTTATTAAATTAATGCAATC 34995
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
34996 TTATTTTATTCATTACTTAAGACTAAGCTTAATTTA 35031
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 36920
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
36921 AAACATCAAAATTTAAGTTATATTAAACCAGTAACCAAACCAAAGGTCCAATATGAGTCAAATAATAGGAAATAATCCTAGGAAAATATA 37010
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
37011 AGAAAAGCTAAAGTAATAAAA---TATAAAATTCTC 37043
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 37045
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.38
37046 CGAGTCAAATCATATAAACAGAAAGAAATGGCTTGCAGGACCAAAAGCATGCGAGTAAGTAA-AACAAAAGAATAACTGCAGATAAGAAA 37134
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
37135 TACCTGTTAAAGTTAAATAGCTATAGAAGGACTGTT 37170
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 37156
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.52
37157 ATAGAAGGACTGTTTGAAATAAGCCAAAAAATATTAACATTTCAGAATAAAATTAACAGTAGAAGAAACCCTAAATTCGCTAAAGAAAAA 37246
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
37247 ATAAAAAAGAAGAAACAAAATATTGGCATAACAGTA 37282
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 37183
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.26
37184 AAAATATTAACATTTCAG---AATAAAATTAACAGTAGAAGAAACCCTAAATTCGCTAAAGAAAAAATAAAAAAGAAGAAACAAAATATT 37270
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
37271 GGCATAACAGTAACAAACCACGATAATAGAAATATT 37306
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 37315
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
37316 ATATCATCATATAACATTCCATTGCTAAAAATAAAGCGGAAGAAGAAACCCATGAGCATTTGCAATAATAAAGAACCTGTTAAACTAATA 37405
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
37406 AATCTTTTACAAAAATAGCCCACTAAAAAATTCATA 37441
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 37515
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
37516 TATCACAGCAACTATAATATTAATGGTAGAAATAAAAAGAAGCATTA-GGAATAAGAAAAGAGAAAGCGTATAAAACCTAAGAACCTAAT 37604
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
37605 TTTAAAAGATTCCTGCTAACAAAACACTACCGTAGTAGG 37643
31 L K R R L L - K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 37572
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.26
37573 AAGAGAAAGCGTATAAAACCTAAGAACCTAATTTT-AAAAGA---TTCCTGCTAACAAAACACTACCGTAGTAGGAGCTTCAACATGGCT 37658
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
37659 TTAGGAAGCCATAAATGGAAAGGAATCATCGGAATT 37694
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 37789
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
37790 TTAAATAATTATCATAACAATTCCGTTAACATAAAAAAAGAACCAATAAAGTATATAAAAAGAATTATTAGCAGCAAAATCTTAGCTATT 37879
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
37880 TGTAACCCCAAATTCCTATAAGA-GCAAAACAGGTA 37914
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 37955
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 26 Length-adjusted: 0.62
37956 GTTGAAAAGCAATTTACTAATAATACAATA---CAAAAAATAAAATATATATTTTTCTTTAAGACATATTCAATTACT---CTAGTAATA 38039
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
38040 AGACAACTAAACATCCTAAAAAGTAGATAAAATAATATA 38078
31 L K R R L L K G R - K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 38646
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
38647 CTCAGAAAAGGTTGAAAGCCACACTCATAAGCAGATGATTTTTCAAATCCACTTTTGATGTAAAAC---TTAAAACAT---AAACAGCAC 38730
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
38731 CTAAAAGAATTAAGGCTAAAGCAAAGGACATCATTA 38766
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 38779
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
38780 TTAACTAATTCATTTATATATTCTGACATAATTAAACGGTAAGTGGAATAAAAATTAAAAGTTAATAATATCAATAAACAACTACTTTTT 38869
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
38870 ATCAAATTGACTTTATTATATTGTTTTATATGCTTA 38905
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 39203
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
39204 ATAAGGTTTCAATATCCTGCTGTTGCATTATTACAAAAAAGGCGTTCCAAGAGG---AACAAAAATATTTGGCCTTTACCTAAAGAATTG 39290
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
39291 CGTGAGAAGGTTATATTCGTTTATGTCTTTGGGTAC 39326
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 39871
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.26
39872 TTAAAGCGTAGAAATGGAACGACGTTATTACAAGTTATGAAATTACAAGTACTAATATTGGCTTTATGCCCTACGTACACTTCGAAAGTT 39961
1 M K R T F Q P S T I - V K K R K H G F L S R N K T K T G K A 29
39962 CAATTAAAAAATTATGTCTTATAACAGGTAGAGCACGTT 40000
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 40321
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
40322 TTTAAAAGAACCGTTCTAATTTCCGTATTATCGAAATAATAAACTTTATCAAATCTTGCACAAAATAAATTATATATTTGTCAACAA--- 40408
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
40409 CTAAAGGACTTATTATAACCTCTTAGACAATTTATA 40444
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 40321
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
40322 TTTAAAAGAACCGTTCTAATTTCCGTATTATCGAAATAATAAACTTTATCAAATCTTGCACAAAATAAATTATATATTTGTCAACAA--- 40408
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
40409 CTAAAGGACTTATTATAACCTCTTAGACAATTTATA 40444
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 40633
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
40634 CAAAATAAGTTATTATATCT-TCAAATATAATAAGAAAAAACATAATGGTTTTTTATAGAGATATTATTTCATGGATTAATTTCAGTGCT 40722
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
40723 AAAAGATTTAAATTAGCGCGAAATAAATATTTTATA 40758
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 41065
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
41066 CAGATTAAATAGTTTTTACTTAATCATCCGTACAAACAAGATTTACATTTAATTTTAAAGAAGAATTTATCCTTCAACTGGTTTAGATAT 41155
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
41156 TTGGAAAAAAATACCAAAAGATATGAAAATTCGTTG 41191
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 41350
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
41351 ATTAGAAGTGCATATAAAAAAAGAGAATTATTAAATAAGAA-CGTTATGATGAGTTAAAAGCTTTGAAG---AGGCTAGGCTCAGAAAGA 41436
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
41437 AAAAATGAAAAAAGAAGACAAAAACAAAAAAGCCGT 41472
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 41935
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
41936 AGAAAAAGTGTTTTCCTATTTACAAAGACCATTCGGAGTAAGATGAAGTAATTTTTTGAT---AATGCTTAAAACTTTTGTAGAGGTAGA 42022
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
42023 CTTTATCGTACAAAAATAAAGGTCGAAGAAAATATA 42058
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42068
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
42069 TTTATTCGCATAGTAAACTTAGAAGAAAATTTAAAGAAAGATAAAACGTTATTTGGTATAAAAAAAATAAACGTCGAAAAGAAAAAGATA 42158
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
42159 TTTAAGGAATCATATTTTCGTGATATATTTTTCCAA 42194
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42218
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
42219 ATAAGGTTTAATGCCGATTACCCATATATTATAAGA---AGAAAATTCAATTTT---AATGA-AATACGACGAGATTTACGACGCAAGAA 42301
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
42302 GTAAATAGA---ATGTTAACAAACAGTTTAAGTCTG 42334
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42218
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
42219 ATAAGGTTTAATGCCGATTACCCATATATTATAAGA---AGAAAATTCAATTTT---AATGA-AATACGACGAGATTTACGACGCAAGAA 42301
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
42302 GTAAATAGAATGTTAACAAACAGTTTAAGTCTGATA 42337
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42634
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.33
42635 AAAGACAAATTACGTTCGATATTTGATATTCCAAAAAGAAGATCACATGGCTTACTAGAAAGAAAAAGGTTCGCCGTTTATAGAATATGA 42724
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
42725 CTCCAGACTTCA------AAAGACATTATAGATATA 42754
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42747
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
42748 AGATATAGAACCTTTATACA-ATTATACTTACAGAAACTAGAAGATTTCTTTATACAGGCCATATTTAAAACGAAAAAAACGTATTAAAT 42836
1 M K R T F Q P S T I V K K R K H G F L S R N - K T K T G K A 29
42837 ATACTTAAGAATAAGCGTTTTGAA---AAAAAATTAGTA 42872
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 43220
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 26 Length-adjusted: 0.62
43221 ATTACTAGG---TTT---CCGACTAATCTTGA-AAAGGAAGAAAATGGATCTTTATTAATCGGTTCGCCATTAATACG---AAGTGGTAT 43300
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
43301 AAACGAATTAGACATTTAAAAAGACGATATTTATTA 43336
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 43220
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 26 Length-adjusted: 0.62
43221 ATTACTAGG---TTT---CCGACTAATCTTGA-AAAGGAAGAAAATGGATCTTTATTAATCGGTTCGCCATTAATACG---AAGTGGTAT 43300
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
43301 AAACGAATTAGACATTTAAAAAGACGATATTTATTA 43336
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 43736
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.31
43737 CTTATTGTTTTGTTTTTAGAAATAACGAGCTTGATTAATTTATCAACAAAATTT---GCACGG---AAAAATAAACATCAGCACGATGTT 43820
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
43821 CTAGAAAAAAAGGATTTTCTTTCTAAAGATAGTTTA 43856
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 43877
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
43878 CTTAAAGATATTTTGTTTTACGCA---ATTATAAAAAAAACGTAACATTTAGCTAAAAAACGAAATCAACACGAAATTCATAAG---GTT 43961
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
43962 TACCAAACGAACTTTAGGTTTTTCTTGAATGCATAT 43997
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 44134
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
44135 TTAAAGCAGGCG---TCCCCATAC---ATCACGTCGGAGCGTTTATAC---TTTTTAAATCGT---AAAGTAAACTATTTTTATTATATT 44212
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
44213 TTGAATATATGTATCATTAAATAAAAAAATAAAGAT 44248
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 44415
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
44416 TATGAGCATATGAATATTATTCAAACACTTATGGAAAATATGAGCATCAATTCCTTGAATAAAAATAGAAGGAAAAGTAACAATCATTTG 44505
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
44506 ATTATTAGAAACACCATAATTATGATAAATACTAAA 44541
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 44478
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
44479 AATAGAAGGAAAAGTAACAATCATTTGATTATTAGAAACACCATAATTATGATAAATACTAAATCTATACGAATATTTTTTGATAATATC 44568
1 M K R T F Q P S T I V K K R K H G F L S R N - K T K T G K A 29
44569 ATTCTCCTTCGCTTTTGTATTAGGCACAGAGAAACGATG 44607
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45096
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
45097 ATCCCAAAG---TTTCAGATTTCTCTTGATTTAAAAACTCTACTAACGATTTATTTAAAATCTTTAAAAAGAAGGATTCTAAAAATTTAC 45183
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
45184 GTTGAATTTCAATTTTATAAATAAAGGAATTTATCG 45219
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45479
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
45480 AGTGGTAATATTTTCCTTTATCCCGAACGTATAGGTAAAAGAAAGTACAGG---GTTCATAAA---GAAATGAGAATGAATAATAATATA 45563
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
45564 ACCGTTTTTGTAATACTCGAACAAACAAAATGCTTG 45599
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45548
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
45549 ATGAATAATAATATAACCGTTTTTGTAATACTCGAACAAACAAAATGCTTGCTGTTGTTGAGCTAAGTACTTTGTTTCTTTAAAATTATA 45638
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
45639 TTTATCAGAAAGATAATAACGTTTCA-AAATCGTTA 45673
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45989
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.29
45990 TCCGAAGCGAAAATATTAATATCTGATGCCCTGGACGAATTAAACGATTCAAAATTGGCTAAGATTGGGGATAAGAAA---TATACTATA 46076
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
46077 CTAAAAAGA---GTCCTTAAACGTTTTGAAAGTATA 46109
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45990
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.26
45991 CCGAAGCGAAAATATTA-ATATCTGATGCCCTGGACGAATTAAACGATTCAAAATTGGCTAAGATTGGGGATAAGAAA---TATACTATA 46076
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
46077 CTAAAAAGA---GTCCTTAAACGTTTTGAAAGTATA 46109
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46148
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.26
46149 TCGGATACCATAGCCAATGACACAGGTCATGTTAAGAAATCTATTATGAATTTAATACTTCGCAGCAAAGATCAAAAACCATTTACATCA 46238
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
46239 TTTAATATAAATATTCTAACTATAGCAAAACGTATC 46274
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46328
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.60
46329 TTGGCTCAAGCTATTGAAAGTGCTAAACTTATTGATTTATCTAAACCTAAA---AAATCTAAAAATAAAATAGATCCTTCTAAAGCTGTT 46415
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
46416 GTTAATACTACTAGTAAAAAGAAAAATAAAAGGGGT 46451
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46382
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
46383 TCTAAAAATAAAATAGATCCTTCTAAAGCTGTTGTTAATACTACTAGTAAA------AAGAAAAATAAAAGGGGTTCCACCCCTGCTAGC 46466
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
46467 ATAGCTAAAGCTGTCGCTTCTGATAATAATCCTATT 46502
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46509
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.33
46510 TTTAAAATTATGATATCTACATTACCAATTTATAAAATTCGAAAGCAT---TT-AGATATAAAAAAATGATAAATAACATAAAGAGTATT 46595
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
46596 TTAAATAATTTAAAACTGTTCGTAGGAACAAAATATCTT 46634
31 L K R - R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46769
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
46770 CAATTAGAAGCTTTTCAAGCAGCAACTTATGTTGAAGGGAAATTTTCAGTGTTAGAGGGTATTGAATATATACATAATAATCAACCACGA 46859
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
46860 TTAAATAGG---GTT---GAGGACACCCATAGTTTA 46889
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46889
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.29
46890 CAAGGTGAAAATACTTCTTATCATCTTTTTATAGAAGAATACAAGTCTTTTATTCTTGGCTTAAATCCAGAAAAACAAGGTATTGCTATT 46979
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
46980 AATTATTTACAAACCATTATAACTTATCAACACAGTATG 47018
31 - L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 47674
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
47675 TTAATTTTGAATTGTTCACCC---ACTTTTGTTTATAAACTGAAGGATAGATATGATTCGAAATATGAGGCTTATATA---AAGTGGCAG 47758
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
47759 ATGCCAAAATGTAATATGAGGAACATTACGCTTATC 47794
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 48156
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
48157 CTATTTTGCCCCTTGAGAGAATCGACTCTCGTCTACAAACTGAAAATCTGATGTCTTACCACTAGACGAAAGGGCTACTTTGGTTCTAGT 48246
1 M K R T F Q P S T I V K K R K H - G F L S R N K T K T G K A 29
48247 AGAATCGAACTACCGATTTAACTCATGAGGCACACGTTT 48285
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 48726
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.26
48727 CTAGAAGGTATATGGAAGGCTTTGATTGTAATTAGATTGGAGTACCACTTCAATATTAAACACATAAAAAAATCGATAGCGAAAAAGTAC 48816
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
48817 GTG---AGGGAACTATG-AAAAGCACTCGATCTAAA 48848
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 48780
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
48781 ATTAAACAC---ATAAAAAAATCG---ATAGCGAAAAAGTACGT-GAGGGAACTATGAAAAGCACTCGATCTAAAGAGGTTGAAATAGAT 48863
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
48864 CTTGAAATAAGAAT-TTAAAAGCATTTGATGTTTTT 48898
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 49271
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
49272 TTATACAGACTTTGGGTGCTAAGGTCCTTGGTTAAAGG-AGAAGAGTCCTCACACTAGCTAAGGACCGCAATAAAACTTAA------GTC 49354
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
49355 ---AAAGATATCTTATTACAAAGACAAAAGGATGTA 49387
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 49271
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
49272 TTATACAGACTTTGGGTGCTAAGGTCCTTGGTTAAAGG-AGAAGAGTCCTCACACTAGCTAAGGACCGCAATAAAACTTAAGTCAAAGAT 49360
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T - G K A 29
49361 ATCTTATTACAAAGACAAAAGGATGT-AGGCTTTCAAGC 49398
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 49406
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
49407 TTAAAGAAAGCGTTACAGCTCACGTTTCAAGTACAAGATATTACAAATAAAGGATTTTTCGTTTTATCCAAAGTAGTGAATTTTATTTTG 49496
1 M K R T F Q P S T I V K K - R K H G F L S R N K T K T G K A 29
49497 ATAGCAGAATCTTAGTTTTTAATGGATAATTTAGTAATA 49535
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 49743
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
49744 ATAAAGCGGACTAGTTTTCATATTTTTCCAGAAAAAGAGTTAAAATAAAACGTACTAAAACGACACTGGTAA---ACTAGTAAA---TTA 49827
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
49828 CTG---CGGCGATGGATTAACTATACTAAAGGAACG 49860
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 51378
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
51379 CTGGCTCGAGAG---AATGCTAGCAACTTACTTGATACATGTAGTCGAACGCTTATATGAGCGTGGCGTACG---AGCGACAAGGGCAAA 51462
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
51463 GATAGAAAATACATAGTCAAGGGAAATCCTAGATTT 51498
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 51952
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
51953 ACTCGAGCAAAAATGCCTTATGCTGCTTTGCTTAAAAATATCAAACCCGGCTAACTT---CGTGCAGCAGCCGCGGTAAAACGGGGGGGG 52039
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
52040 TTAGTGTTATTCGTGATGACTGGGCGTAGG---GTA 52072
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 52136
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.29
52137 CATTATTTGAGTTCAGAAGGCGGTTTATTGAATTCTCGAAGGAAGGGTGAAATTGTTGATATTGGAAGACATTCGATAGCGAAAGCAACA 52226
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
52227 TCCGATTCTGATCTAACGCTAGGTACTAAAGTATGG 52262
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 52354
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
52355 CTAACGCGTGAAACACCGCCTGGGGAATGTGGCCGCAAGGTTAAACTCAAAGGAATTGACGGTGACTTATACAAGGGGTGGAGATGTGGT 52444
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
52445 TTAATTCGA---ATACCGCGCAAAACCTTACCAATT 52477
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 52903
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
52904 ACTCAAGAGCATGAAGCGGAATCTCTTGTAATGTGGATCATTACGCACGGTGAATTAGTACAA---AAGTCACGTACAGACCGCCCGTAT 52990
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
52991 GCTATGGAAACTATTTGAAGTAGAAGTTACAAGGTT 53026
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 52975
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
52976 ACAGACCGCCCGTATGCTATGGAAACTATTTG-AAGTAGAAGTTACAAGGTTTCAATTGTTTCGATAG-ACCACCTTATTGAAAGTTTTC 53063
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
53064 ATAAGGCTTGACATTCTGTTGGCTTTGTACACGATC 53099
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53163
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
53164 TTAAAAATTACAACTTTAGCAAGCACTTTGTGTAAACTCTGTATAAAGAGTAAAATATACAAAATTGACGTG---ATTAACGAAATCGGA 53250
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
53251 AAAGCACTAATGTTTGTTAAATCTCGGGGTAGTGTA 53286
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53293
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
53294 GCATACAGGGCTCATAACCCTATGGTCTTGGTTCGATTCCAGGCCCCGACAATTCTA---TATGAC---TTTTATTTGGCTCGTAGCATA 53377
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
53378 AATAGTAATGCTATGGCTTTTAATCGACAGAGTGCA 53413
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53320
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
53321 TTGGTTCGA---TTCCAGGCCCCGACAATTCTA------TATGACTTT---TATTTGGCTCGTAGCATAAATAGTAATGCTATGGCT--- 53395
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
53396 TTTAATCGACAGAGT---GCAGGTGCAAGTCCTGTG 53428
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53575
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
53576 TTTAATTGGTATTTTAAT---AAT---ATTCTTTGCAAAAGAATTCATAATTTTAAATCAAGAAATTATTATTTATTCTATATTTCTATC 53659
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
53660 AATTTTATTTTTTTGTATAAAATCTTTTGCTTCATT 53695
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53693
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.52
53694 TTGGATACAATATTTGAAAATATTCGCTCTAATGAAAAATCCAATTTAAATCTTAATTCTAAAAACGAGAAAAATTTTAATGATACATTA 53783
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
53784 AATCAACGTTATCTTTTGAATTCAGCTTTAAGTCCA 53819
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 54411
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.31
54412 ATTGATCTTATTGTGTGTATGTTGGAATTGGTCAAAAAA---AAAGTTCTATTTGAATATTCAAACTTACTTCAAAATAATAAAGCGCTC 54498
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
54499 ATTATACTACTATTGTTGCTGCAACGCTGCACAAAG 54534
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 54487
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
54488 ATAAAGCGCTCATTATACTACTATTGTTGCTGCAACGCTGCACAAAGTGCCTCTCTTCAGTTTATTGCTCCATATACAGGATGTGCATTG 54577
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
54578 CTGAATTTTATCGTGATAAGGTGAACATGCTTAATT 54613
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 55420
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.29
55421 ATATTATATAGCTATACTATATATAACTTA---AAAAAGAGATTAATA---TTTAAAGCAATAAACTTCATATATATT---TATATAATA 55501
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
55502 GTAAAATTAAAAAGATTAAAGGGCATTACTTCCATA 55537
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 55474
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
55475 ATAAACTTCATATATATTTATATAATAGTAAAATTAAAAAGATTAAAGGGCATTACTTCCATAAGCATACACATTACAAATAAAAGTAAC 55564
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
55565 CAAACACATCAACGAAATGCCAATACCAAGCCAAGC 55600
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 55710
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
55711 ATAAAAACTGAACCATAAATTCCATCAGAAATA---GAAAAGGAGCATGACATACTCATACATTTGAATACAGTAAAAACT---AAAGCT 55794
1 M K R T F - Q P S T I V K K R K H G F L S R N K T K T G K A 29
55795 AAAACAATGTAG---CTATTAAAGATTCATAGCAATTTG 55830
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 55894
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
55895 GTATTAACAACAGGTAAAGCTAAACCTATACTTCTAAAGCAAAAGGAGGCC---ATTGACTACCATTTCAATATTAG-GGCTTAACTACT 55980
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
55981 ATGAAAATAGCCCAGAAAAAAGAAAAGAAAAACATA 56016
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 56268
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.38
56269 TATTATTCATATTATAAAATTATAGCAGTTGTTTTATTATATCCGAC-AAATTT---AGTAGATAAAAATACAATAAGAATAATGCAATA 56354
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
56355 ATAAAAGAAAAATACTTAAAAACATATAATGTTGTG 56390
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 56357
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
56358 AAAGAAAAATACTTAAAAACATATAATGTTGTGTGTTTTAAAGAATATGAGGTAAAAAGTTCTAATCATTTAAAAGATAATTAGAGAAAA 56447
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
56448 TACAATCTCGAGATTGTATCGCTAAATAAAAAAGTC 56483
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 56974
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
56975 TTTTGTCGGCATTTTAACACGGAAACACTT---AATAAACGATGTACT---TTACGTAGTTTAAATCTTGTCGAGTCATTTCAAAATAAC 57058
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
57059 TCTAATTTATTAGCAGCAAAAACCCATTTATCTATT 57094
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 57621
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
57622 CTGAAATATAAATCTGAAACCTCAATGGCACTACGCGTTTATAGTAACGAATTATTGTTTTATTATACTATTAAAATT---AAA---ATA 57705
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
57706 TTACCAAGTTTAATACTATATAATTTACTAGAAATT 57741
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 58533
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
58534 ---AAAAGAGAT---GGACCATATGAAATGTTTAATGAGAGAAAACTAAAG---ATCTCGCATAAAAGGATTTCGATAGGT---TTAATT 58611
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
58612 TTATCTTTTCAAGTTCTAATTTTCTAGATTAATATT 58647
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 59893
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
59894 TTAAATTATTTATTTAGA---AAGAGAATTATAAACAATATTATCAGGGAGTTTTTGAACAGCTTTAAGAA-AATAACGGTCAATTTGA- 59978
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
59979 CTTACAATTATGATACAAAGAAATAGGCAAAGTATA 60014
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 60021
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
60022 GTTAAACGTCCT---AAAAATAAGAACGTTCTTCAAGAG---GACTTTGACCATATAACCTAAAACAAAACAATCAGCATAAATAAAATA 60105
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
60106 TTAAGTTTAGCAATAAATGCTTATAAACAGACTACG 60141
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 60301
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
60302 TATAATTATCTGGATGACCTAGCTATTAGGTATAAAAGAACAAAGAATATAATTATGGCTATAAATAAAATTACACTAAAAAAATCTTTA 60391
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
60392 ATGTATAATAAGGATGAAAAGAATTTCATCAATAGA 60427
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 60364
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.52
60365 AATAAAATTACACTAAAAAAATCTTTAATGTATAATAAGGATGAAAAGAATTTCATCAATAGAGCG---GCCCCACCCTGAAGATGTACC 60451
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
60452 ACTACCAGATTGATGTATAAGGCTAAATGTAATAAA 60487
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 60719
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.31
60720 AATAATCGGCGGAAAAAAGTATGAACCATAATACAAACCGCGAAAAAGATGAGCATATACTACAATAAAGAAAAAAGAAGCACCATTAGC 60809
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
60810 ATGAGATATCGGATAAACCAACCATAAGGACATCTC 60845
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 60757
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
60758 CGCGAAAAAGATGAGCATATACTACAATAAAGAAAAAAGAAGCACCATTAGCATGAGATATCGGATAAACCAACCATAAGGACATCTCTC 60847
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
60848 ATAAATGCTCAACACTTAAAAAAGCTAAAATGCATT 60883
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61620
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
61621 ATCCGGAGAGTACTCCAAAAAAACACAAAAAATGAAAACCGATGAAAAAAA---AAACCAAAAAATAAA---AAACACAAAAAAAATATT 61704
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
61705 TTTAAATAAAAAATTTTTTCCAATATTATTTTTTAT 61740
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61651
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.55
61652 ATGAAAACCGATGAAAAAAAAAACCAAAAAATAAAAAACACAAAAAAAATATTTTTAAATAAAAAATTTTTTCCAATATTATTTTTTATA 61741
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
61742 ATAATATTAAAAATTTTATTAATACGTGAAATTTTT 61777
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61993
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.33
61994 TTTATCCGT---TTTTATCCAGGTCAT---GTGAATAAAATTATCAATATTATTAATACTTCTCTAAAAAAAGTATCACCACAAGCACTT 62077
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
62078 ATTGAACAAAATCGAATAGAAGCTAATAAAATGATT 62113
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61993
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.33
61994 TTTATCCGT---TTTTATCCAGGTCAT---GTGAATAAAATTATCAATATTATTAATACTTCTCTAAAAAAAGTATCACCACAAGCACTT 62077
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
62078 ATTGAACAAAATCGAATAGAAGCTAATAAAATGATT 62113
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62149
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 26 Length-adjusted: 0.62
62150 TTATCTGATTTATTAGATGATCACAAAATTATTAAT---CGTATGCATGATTTTATTCATAAACAACCAACTCTTAGTTCAAGAGCATTT 62236
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
62237 CAATTAGCATTGGAAGTTTCATATTCTAAACGTTCTTTT 62275
31 - L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62260
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.45
62261 TCTAAACGTTCTTTTAACGAAGCTACTTTGCAAGATTTTTTCAAAAATGAATTTAACATTAGAGATACCTTTAATGTTAATAATGGAGTA 62350
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
62351 TGTGATCAAAGCACTATTTTTTCAGCACTAATGGCT 62386
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62398
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
62399 TCTTATTATAATTTGAATTCAAAAGATATTATTGTTAATAGTACACCATTATATTTAACAAAAGATATTTCTCCTGAAATAAAGGCCAGC 62488
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
62489 ATGGAATTTAATAAAAATTTAACAGGAAATTCGTGTCCT 62527
31 L K - R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62545
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.29
62546 CATCCTTATGATTTTAAAGATTCAAAGGATATAAAATGGAATAAAAATCAGATTTATTTGGTTGATAATACTAGTTTTAATGAACAGGCT 62635
1 M K R T F Q P S T I V K K R K H G - F L S R N K T K T G K A 29
62636 ATAATAATGTTAAATCATTTGGAA---AAATCTTTGATT 62671
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62641
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 240 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.21
62642 ATGTTAAATCATTTGGAAAAATCTTTGATTAATCAATTAACTGTTAATCATTTGATGTCTAGTGAATGTGTTCTTTATACTAAAGATATT 62731
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
62732 TTAGCAATTATGAAAAATAAAAGTACGAGCTCTGCT 62767
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 110
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
111 AAAAAGGAATTAAGTAAAAGATATGTTATCATAATATTTCGGAAGAATCAGGTAATA---TATGGG---ACAAGGAGCTATGTATAGCTT 194
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
195 TTTGAACCTTATCTCTTAAGA---AGGGATTCCATT 227
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 170
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
171 TTAGAAAAAATATTTGGAATTAGAAAAATTCTAATTAAAATAAATAAAATAAGTTTAATC---AATAAAAAGGAATTAAGTAAAAGATAT 257
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
258 GTTATCATA---ATATTTCGGAAGAATCAGGTAATA 290
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 713
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
714 AAGAAAAAAAATTATCAGGTCTTGGTTTATGAGGCTTTTTATCAAAATAATAT-TTTTTATACAATAACTCAATTTTATGTTTTATACTT 802
1 M K R T F Q P S T I - V K K R K H G F L S R N K T K T G K A 29
803 ATTTTAAGAAAAGAATTTGCTAAAGGCCATAAATACTTT 841
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 780
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
781 ATGAAAAAGTAATTCAGGTAATGTAGGATTATTTTTAAAAAATAAAATTTTTGCCTCTTCAGATAAAGAAAAAAAATTATCAGGTCTTGG 870
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
871 TTTATGAGGCTTTTTATCAAAATAATATTTTTTATA 906
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 1688
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.48
1689 TATTGTAGGTGGTATTGTTTCAGTTTCAATTTCAAATCTAGGGATAATTGTTTCACGTTTAAGATCAATATTAGGTCTTCTAGG---ATA 1775
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
1776 TTCTATTTTAGGCTCTTTGGATTTAACAGGTATATC 1811
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 2074
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
2075 GCAAAAAAACTATTGACAATTAGTTCCTTAAGTAATAAATTAATTAAATGA---TTAGTGTTTTGCAAATCAGACGGTGTAAGATTACTA 2161
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
2162 TTTAAATTACTTTTTATAAAATATTCATGGACTGTA 2197
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 2152
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
2153 TTTTCTAAATTACTTAAAACTTCAACTATT---AGGGATGTTGCAATTTGTTTCATTATAAAACTTTCGTTGTCAGCGGCAAAAAAACTA 2239
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
2240 TTGACAATTAGTTCCTTAAGTAAT---AAATTAATT 2272
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 2377
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
2378 TTCTTGAGGTGTTTTACTCTCAGGCATTTCTTTAATAGATTTTGGTTGTGTTTTCCCTAAATTGCCAGGATAAAAACGGATAAAATTACT 2467
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
2468 ATAAGAAATTTTATTTGTAAA---AAAATTAGTATG 2500
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 3645
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
3646 ATTCCATTAGGATTAGAATCCATATTTTTAGCAATAAAAAAATTCCTTTCTTTTATA---CGTAATAATATTTCTTCTGTTTTTGGATAT 3732
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
3733 ---TCTAATAAATATTTAAATCCTAAGCTATCTTTA 3765
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 3940
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
3941 ATTTCTTCTACAATACTTTTATTATCTGTATTTTTGCCATAAAAATACAACGTCATTTCAAGATTTACTATTAAG---GGC---TCAATT 4024
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
4025 TTCTCATCTACAATTAAAAAAGT-AGGAAAAATACG 4059
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 4633
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
4634 ATACTATATATATATATGCAACAAATATAAATTAAAATCCAAAAGCGA---TAT---TCTGTTAATAAA---GAATCAGGTAGTTCTCTA 4714
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
4715 ATAGTACGAGATCGAATAAATCTACTCCAAATTATC 4750
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 5076
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
5077 CTTTTGTATTTTTTTTACGAGAATCATCAAATTTATATCCAACTTCATAAATTCTTACTAACGAATATTTATTTTCCAATTCTACAATCC 5166
1 M K R T F Q P S T I V K K R K H G F L S R N - K T K T G K A 29
5167 AGTGTTCATAAACATCTTTTAAAGAATATTTAAAATATC 5205
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 5575
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.45
5576 GTTAATAGA---TTTTTATTATGTGAACCGCTATCGAAATCCATAAATGGATTTTCTTCTTTCACCAAATATAACATA---AAA---TTT 5656
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
5657 AATAAAAGATATTTACTCATAATT---AAATCTATA 5689
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 6432
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
6433 AGAAAAAGA------CATTGAACGGTGATCAAGCAATTTTTTAGCATGACCTATTTTTTTATCAGTGGGATAAAAACGCTTAGATATTTG 6516
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
6517 AATGACTATCGGCTTACAAAGATACAGAAAGCTATT 6552
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 6432
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.21
6433 TCTTTTAGAAAAAGACATTGAACGGTGATCAAGCAATTTTTTAGCATGACCTATTTTTTTATCAGTGGGATAAAAACGCTTAGATATTTG 6522
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
6523 AATGACTATCGGCTTACAAAGATACAGAAAGCTATT 6558
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 6903
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
6904 TTAGAGAAATCATTTAAA------ACAGTAGTAGACGGGGT-ATGTTGGGTATCATTAGT---AAT---ACCAAAATGCAATGGAGGTAT 6980
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
6981 TGGAAATGTAGGATCACTAAGATTTATATTTTGATT 7016
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 6992
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.38
6993 TCCATACTTGTTTTTTCAGTAATATTAGTAGTATATATAACACCGTCTGGATTTTTTAATTCAGGAATTGGTTTTACGCTTGAAGAAGTA 7082
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
7083 TTATCTATT---TTAGAGAAATCATTTAAAACAGTA 7115
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 8102
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
8103 ATTGGAAATAAGATTAAATTGTTTCGTATAATTGTCAAAAGATTTTACAGTATTTATAATAGATACCAAAACATTAAGTATAAATTGAGG 8192
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
8193 TGGTACTTTAGGTTTAATAAGCCTATAAATTATATA 8228
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 8373
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
8374 CATTTTCAGAATTTTTTTCCCAATAATTTATATAGTGTTCACAAACATAGTCAAAAGAATATAAACTAAATGGGATTAAGAAAAAGAATA 8463
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
8464 ATGTAACCCAAATGACTTTATAAAAATAAAATAATT 8499
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 9900
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
9901 ATATTTATGGTTGCTCCAATATTAAGATTTCTTAAGGAAAAAATCAATCCTATTGTAAATAAGTTTAATAAAAATAAATCTAATATTTCC 9990
1 M K R T F Q P S T I V K K R K H G F L S R - N K T K T G K A 29
9991 ATTTTTATATCTTTGATATATAAATAATCTAATAGTTTA 10029
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 9975
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
9976 AAAAAACATACATTAATACA-CAAAGTGAAATAATTTGCGATAATATTACAAGACTTGGTCGAAATAAGAAAATATTTATGGTTGCTCCA 10064
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
10065 ATATTAAGATTTCTTAAGGAAAAAATCAATCCTATT 10100
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 10274
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 38 Length-adjusted: 0.90
10275 ATAATAAAA---TTTCAGGAAAAAATGCTCGTAAAATATAGAAGATATTTTTTATATAAGCATATATGTACAAGATCTTATTGCATAGTA 10361
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
10362 TTATCATTAGCACTTGTAAAT---AAGAAGAGTTTA 10394
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 11470
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.43
11471 TTA------ATTGTTAAAAATAACACTATAATTAAAATTAGAATGTTTAACATATTTAAATTTTTAAAAGGGAAAAACATTAATTCTCAT 11554
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
11555 TCTAAACATCGTTTTATGAAGAAAATCAAGTATTTT 11590
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 11470
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 31 Length-adjusted: 0.74
11471 ATTATTTTAATTGTTAAAAATAACACTATAATTAAAATTAGAATGTTTAACATATTTAAATTTTTAAAAGGGAAAAACATTAATTCTCAT 11560
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
11561 TCTAAACATCGTTTTATGAAGAAAATCAAGTATTTT 11596
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 12360
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
12361 ATCTATATTGGTTTTCATGTTTAAAGTACTTTTGTTATTAGC---AAATATAAAATATTGTACATTATAAAAATTTTTATTAAGCAAGCC 12447
1 M K R T F Q P - S T I V K K R K H G F L S R N K T K T G K A 29
12448 ATC---AAACATAAAATCTTTTTTTTTCTCAAAAATATA 12483
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 12692
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
12693 TTGAATTTTTTATTAAAGACATATTCT---GTAAAATCATCAATTTCAGCTGTATTAGACAAAGTAAAAATTTTAGTTGCTGAATATAAT 12779
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
12780 ATAAAAATTAATGGCAATAGAATAAAAAAAGAATAT 12815
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 12767
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
12768 ATAAAAATAAATTTTGGT---TGTAATATTATTAAAAATATAAATAATGAATTGATATTAAAATCCAAGAA-ATAATATTGAATTTTTTA 12853
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
12854 TTAAAGACATATTCTGTAAAATCATCAATTTCAGCT 12889
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 13246
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
13247 ATTAAGCAAACCTTTTTCATAAATAATTTTTACAGTAAGATAAATACCTTCTACTTGATTAATTTTAAGGATAAAATTAAT---CTTTTG 13333
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
13334 TACAAAAGATACTACAGTTTGGATAA-CACTTAATA 13368
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 14227
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
14228 TTAGATGTAGTAATACTATCTTCATATTTTTCATTCAAACTTAAAGATCTTGGATTATTAGATCC-AGCAGTACTCGATTCTTTAAAAAT 14316
1 M K R T F Q P S T I V K K R K H - G F L S R N K T K T G K A 29
14317 GTTATGTTTTATCAAATATTCAATAAGATAAGAACCTAT 14355
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 15675
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.21
15676 TTTAAATATGACTTTAAACATGAAATAGTAATTTCAGAATTA---AATATTTTTTTA---CAAAGTAAATTAGAAATTTCTGCTAAATTC 15759
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
15760 AATGCATATAAATCATTACGGTTTATGTCAAATTTA 15795
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 15762
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
15763 TATACATTTACATTCTTGCATAAAAGAATCAGGAAAAG-AATAAGTATCGGAAATTGCACAAGGAGTCACTTCATAT-TTAAAAGCCATT 15850
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
15851 TTTTTTAAATATGACTTTAAACATGAAATAGTAATT 15886
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 16726
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
16727 TTGAAAAAACAAAGTTATTATAAAAACCTCTATAA-TTAAAATTTAACAAAATAAGGACTTGTAATGATACC---ATCCCAATAATTATC 16812
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
16813 ATCGTTAGGAGATTTATTAAGATCAAAGAGAAGCTG 16848
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 16828
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
16829 CTTAATACCTCTCTTAAAAGGGACTTTAG-GTAGCAAAATATAGCTATAGAAGTATAAATAGAGAAAGAAAT---AGTAAGGAATCAAAA 16914
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
16915 ATACCCAGATTAATAATTGAAAAAACAAAGTTATTA 16950
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 17387
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
17388 ATAAAGGAATTAATGTACCAAAGTAATGG-ATAAAGGATCATTATAAATTTGTAGTAATATCTAAAGTACCTACAGAAACCCAAGAACCT 17476
1 M K R T F Q P S T I V K - K R K H G F L S R N K T K T G K A 29
17477 AAATTAAAGCTT---ATATTTGACCATAAAAAAAACATG 17512
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 17390
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
17391 ATAAAGGAATTAATGTACCAAAGTAATGG-ATAAAGGATCAT---TATAAATTTGTAGTAATATCTAAAGTACCTACAGAAACCCAAGAA 17476
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
17477 CCTAAATTAAAGCTTATATTTGACCATAAAAAAAAC 17512
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 17838
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
17839 ATAGCATCAGGTAACCAAGGATGTAAAAAGATTGTGCTGATTTAGCACAGC------AGCAAAAATAGGAA-AAGAGCTATCATTCAATT 17921
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
17922 GTTGAAAAGAATATGAAAAAAGCTAAAAGTAGTATG 17957
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 18128
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
18129 AATAAGAGTGCTTTAAAGAAAGCATATTTACTAAATGAAATAAAGCAAAGTATAATTACCAATACCATAGCAAACATCATAAACCAAGTT 18218
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
18219 GGCTACAGGTTGAAAATGCATAATACGTTTTATGTC 18254
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 18825
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.52
18826 CTAAAACACCTTATCTATAATTTTATAAGTATATTTAAAGAAAAGTTGCAGATGGTA---AGAAAT---ATAAAAACTATTAAAAGCATC 18909
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
18910 TCAAAGAAT---TTTTTACAAGAAAATAAGGTAATA 18942
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 19677
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.33
19678 ATTAAACATGGGTATTCTGT-TCTAGGATTGTTAGGAGAATAATATTTCATGTTTTATTTTGTGATCAAACTAGAAATTATAATCTAGGC 19766
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
19767 AATTTTTTATACTTGTTAAAAGGTCATCATAATCTC 19802
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 20040
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.43
20041 CTTAAAATGAATTATCAAAGCTATTTTGTCCTAAACAAAGTTAATATTTTCTTATTTATATTTAAAGATAAAAATGCTGTTGGAAAGTTT 20130
1 M K R T F Q P S T I V K K R K - H G F L S R N K T K T G K A 29
20131 TATTAATTTAAGAAAAAGATAGAAATTAATTCCTATTGTTTT 20172
30 V - L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 20384
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
20385 GGTAAAGGAACC---TCTATACGAACTTTATGAAAAATGTATTTAAAGCTTTTCTTATTTGATAATAGTATAAGTTATGTTAAGTATATG 20471
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
20472 ATATCATTTCGAATTGCTAAATAAACGAATTCATAT 20507
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 20750
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
20751 ATGTTA---CCTTTTCAAATTGCTTTGATTATCACATATTTGTATGAAGGA---ATACGTAAACATAAACACTCATGTAGCCACACATT- 20833
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
20834 CTATCAAGA---ATACTTAAAGAATTGCTGGGAATT 20866
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 20882
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.50
20883 AATGCAAAAACTTTGGGTCCACAT---TTTTATAAAAAGATAGAAAATCAAATGAGAACTAAAAAACTAGTATTAGATACTTCAGCAGCA 20969
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
20970 AATAAACAATTAAATGTGAAAAGCCATCGATCGTTG 21005
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 22307
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
22308 ACATCACAG---TATGTAAAGGAT---ATTTATCAACATAGGAAAACCTCTATACCAAGTTTTAATTGTTTAAAAAGCCAAAGAAAGATG 22391
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
22392 ATAAGCTCGTTGTTTATTACCCGTTTTTGTAATATT 22427
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 22307
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.29
22308 TTTTTTACATCACAGTATGTAAAGGATATTTATCAACATAGGAAAACCTCTATACCAAGTTTTAATTGTTTAAAAAGCCAAAGAAAGATG 22397
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
22398 ATAAGCTCGTTGTTTATTACCCGTTTTTGTAATATT 22433
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 23180
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
23181 TATAAGAAAAAATTC---CCACAG---ATAACAAACTAAGCAATATTAGCAGAACGGTTGGATCATATAGTGAATGCATACAAGAGCTTT 23264
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
23265 ATATTCAGAAGAATATTACGTTTAAATCAATATATC 23300
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 23427
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.29
23428 ATTTTCATTACCATACAACCTAAAGATGCTATCACTAAGTATGAAAGAAACAAGTTCTCCAGATTTAGTTTTGTTAAAGCTTATCAAAAT 23517
1 M K R T F Q P S T I V K K R K H G F L S R - N K T K T G K A 29
23518 CTTTT-CTAATTAAATTGTGGAACAACCGCAGCTCTAGT 23555
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 23436
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
23437 ATTTTCATTACCATACAACCTAAAGATGCTATCACTAAGTATGAAAGAAACAAGTTCTCCAGATTTAGTTTT---GTT---AAAGCTTAT 23520
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
23521 CA-AAATCTTTTCTAATTAAATTGTGGAACAACCGC 23555
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 24163
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
24164 AGTAAAAGAACTATATTACGTTATAGCGCACAAATTTTTCGAAATAATACTATACCATTTATATTAGAATATTTGTTACTAAGTAGTTTA 24253
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
24254 TTGATATCATTACTATTAAAATCTAATAAAATAATT 24289
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 24338
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
24339 GATAGGAAAGTAAATTTGTTTTTTAA-ATAAGCAATAATATTAAACATAATTTTTA-AAAAAGTATAAAAGCGAACGTAAAATTAATCTT 24426
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
24427 ACCAAATGGAATGACGTAAAAGGTAACAAGAATAGT 24462
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 24546
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
24547 ATAAAATAAACTAATAAACTACCAAGTCTAGTGCACAAAAAGAAATATAATTTATAATAGAAGATAACAATAAAACCTAAACGGTGCGAT 24636
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
24637 TTGAAAATATGAAAACTATTGTGCACTAAAAGAAAACCA 24675
31 L K R - R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 25019
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
25020 TTGCTACAGTGTTTTTAAAATCCTCAAAAAAGAATTGCAAAGAGAGATTCACCTGATCTTTTAGATCCAACTCTTCTTCAGAGTCAGTAC 25109
1 M K R T F - Q P S T I V K K R K H G F L S R N K T K T G K A 29
25110 TAGAAGAAGATTCAGATGATGAAGCAAAAGAAGAAGCTG 25148
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 25681
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
25682 ATAACATATCATTTCAAATATAATAATTTAATACAACATCTTATTTTTATAAAATTAAATTAAGAACGTTATCAAAGTTCGACCGGACTT 25771
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
25772 TTTAAAGCTTTCAAATTTAGGGTTAAACCCAAGGCA 25807
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 27050
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
27051 TATAGTTTATGGTTATTACCTTCCTCTTTAATTTTACTTCTTTTATCTTCTTATGTTGAAATGGTGCTGGAACTGGTTGGACTGTTTATC 27140
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
27141 CTCCACTATCTTCTATTACT-GGTCATAGCGGACCA 27175
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 27796
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
27797 TTTGATCAACATTTTAAATTTTTCTCTAAGGTATTATAGTTCCTGAAGCTATATGTATACAAGTGTGAAGCTCCAAAAGGAGAATTGGTA 27886
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
27887 CTTTAATTGCGTCTTACAAAATAATACCAAACCTTA 27922
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 28147
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
28148 ATGGAAGAATTACTAACAGATAATCGAATATTTAAAGATCGTTGTAAATATAGGAAAAGTTACATAGATGTTGCTAAAGA-TATGCT--- 28233
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
28234 TTTTCTGGTGTTATGGTTCGAGGTAGGGTATACCTT 28269
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 30181
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
30182 AATAGATATGGTTTTAA-CCAGGTTTTATATTTAAAATGTTAATTGTTTAATTCGTTTACGACGACAATTATAGACATAAT---ATTATT 30267
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
30268 CAAGAGATTCGAGTATTA---GCAACTAAGTCGATA 30300
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 30621
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
30622 TTAGTAGTTTAAGTGTAT---TTAATGTATCTAAAAACTAATAAACATAATTTTTTAAAAAGTAT-AAAAGCAAACATAAAGTTAATATT 30707
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
30708 ATTAATTACATTTTAAAGGAATCAAGTAATCAAATT 30743
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 30621
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.33
30622 ATGTTAGTAGTTTAAGTGTATTTAATGTATCTAAAAACTAATAAACATAATTTTTTAAAAAGTAT-AAAAGCAAACATAAAGTTAATATT 30710
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
30711 ATTAATTACATTTTAAAGGAATCAAGTAATCAAATT 30746
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 31105
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
31106 TCCAAATAGAAATATTTTAAACCTGCTTCGTTTGTAAGTATG---ATCTATTTGTTCATAAGCAGCCAAAGTATAAAAACAAAAGATTGT 31192
1 M K - R T F Q P S T I V K K R K H G F L S R N K T K T G K A 29
31193 AA-CTCATTGTTAAAAACCAAATAATTTATAAATCAGTA 31230
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 31902
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
31903 AGCAGGTATACTATAACAGAAGCATTTTTTAA-ATAAAGGAGAAATATAACATTTTAACT---AACGCAAATAATAAAAACTACTAATTA 31988
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
31989 ATGAAAAAG---CTAATAAAACAGCACAAGTAAATA 32021
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32312
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
32313 ATGCGCAACCAATTCCGCAATGCGTATACAATCCATAAAAGTAATCTAAATCTGTTAAAGGTTAATCTAGAGCTTCAATGGAATACAACA 32402
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
32403 TATGAAGCTGCAATTGCTGCACTCTTTGCCAAAATA 32438
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32510
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.31
32511 CTCTCCAAAGGTATTCAACCAACAATTTATTGTGAACCGGTAATACAAGCATGGCTATCGTTT---CCTTCAGATTTAAGAAAGGCATTC 32597
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
32598 ATGAATGATGTACAACAAGCTTCTGATCCATCAACG 32633
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32510
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.31
32511 CTCTCCAAAGGTATTCAACCAACAATTTATTGTGAACCGGTAATACAAGCATGGCTATCGTTT---CCTTCAGATTTAAGAAAGGCATTC 32597
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
32598 ATGAATGATGTACAACAAGCTTCTGATCCATCAACG 32633
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32977
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 31 Length-adjusted: 0.74
32978 TTTACGGGTAATTTTCAAATATCCAAACTTATTAATAAACCTTTAGACAAGTTTTTTGGATCTACCTTATCAAATAATTCTTATTCACTT 33067
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
33068 CTTATCAATTATTTAACAAGTACAACTAAGATTATC 33103
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33133
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
33134 ATCAAACTAATGTTTTTTCCAGAAGAATCAGATAGTTATAAAGTACCGTTATTTACCTCTGAACAAAAGAAGCAAGTAGAAGGTTATCTT 33223
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T - G K A 29
33224 TCTGAGCATATAAACTTATTTGTAATTCAAGATTTTATT 33262
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33517
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
33518 TATAATACTATGTTTTCC---AATGCAGTATTAAAGGAAACAGAAAATAAACTCATCAATAATTTAAAAGACGACTCTTTAATCACATTG 33604
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
33605 TATAATAAATATTTGATACATTCCCCGGATGAGCGT 33640
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33517
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
33518 TATTATAATACTATGTTTTCCAATGCAGTATTAAAGGAAACAGAAAATAAACTCATCAATAATTTAAAAGACGACTCTTTAATCACATTG 33607
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
33608 TATAATAAATATTTGATACATTCCCCGGATGAGCGT 33643
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33721
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
33722 TTCAAACGTATGTCCAAATAACAAGTTATCATGGAAAAACAACAATTCCAAATGCTTGTC---AACTA-AGTCGCTTAATTAATAGTATG 33807
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
33808 ACGAAAAATACAACATTGTACTTTAATCGTCTAATT 33843
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33796
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.21
33797 ACCACGAGAAGTTACAAGAACTTTATAATCGTCAGGTTATATCT-CATGTGCATCCCGAGACTACACATACAGCCTTATTTCAAACGTAT 33885
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
33886 GTCCAAATAACAAGTTATCATGGAAAAACAACAATT 33921
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33976
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
33977 TCCCCTACTACATTAAATATAAATCCGCTTAGCAAGAAGCAAAGTCAAAGA---ACCTCTCCGAATAAA---AAAAGCTTATCACAACCG 34060
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
34061 ---AAAAGGTATCAACTAGATTCCTTGCATGTAATA 34093
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 34045
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
34046 ATGGACATTATCAACATGTTAATCGCAATCCTTTTAAAACC-CCATATAGTAACATGACTAATAATAATATAAACACATCCCCTACTACA 34134
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
34135 TTAAATATAAATCCGCTTAGCAAGAAGCAAAGTCAA 34170
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 34268
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
34269 TTAGAAAGTGATATGCTTAAAAAGACTCTTATATCCTCGCGAGATAAAGAAGCATATAAGTATAT-CAA---AGAGATGGTAAGGATGTA 34354
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
34355 TATAAAAGCATTGTAGTATAAAACCGTGGCAACTGC 34390
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 34339
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
34340 ATGCAGAATACC---GAA---TTATGTATATTTGACGATGACCTATATGGGGCAATATACAATTTACAGGTAATCTTAGAAAGTGATATG 34423
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
34424 CTTAAAAAGACTCTTATATCCTCGCGAGATAAAGAA 34459
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 34491
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
34492 CTTAATAAAGCTTTTCAACA-AAGGTAAAAAGACCCTTATATGCCAACCAACTAATAAAGAGTGTGGATGTTTTATCTGCGACTTCTTTA 34580
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
34581 AT-AGGAGGGAGTCTTTAAAGATAGATAAGGCTTTA 34615
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 34782
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
34783 ATGAAATGTTTATTTGTTTTAAAGACTTCATAAAAGCCCAAATTTCATAACGACACTAGC---ACCTATCTTCTTCTTGCTAAAACAAAT 34869
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
34870 ---GATACACGGTTTATATTTAACCGTCTTTTAATA 34902
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 34782
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
34783 ATGAAATGTTTATTTGTTTTAAAGACTTCATAAAAGCCCAAATTTCATAACGACACTAGC---ACCTATCTTCTTCTTGCTAAAACAAAT 34869
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
34870 ---GATACACGGTTTATATTTAACCGTCTTTTAATA 34902
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 36419
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
36420 AATAAAAATTCTACACAATTAATAAAGGTAATAACCATA---AAGCATATTTTT------AGGACAAAAACATATACGAATTTAGACCTA 36500
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
36501 ATTCTTTAATACCTATATAACCCATGCAATGAAATA 36536
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 36450
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
36451 TTTGCAAATAAACGAAGACCCAGACTATAGGACGTAAGAAGAAAATAAAAATTCTACACAATTAATAAAGGTAATAACCATAAAGCATAT 36540
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
36541 TTTTAGGACAAAAACATATACGAATTTAGACCTAATTCT 36579
31 L - K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37549
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
37550 CCTTTCCATTTATGGCTTCCTAAAGCCATGTTGAAGCTCCTACTACGGTAGTGTTTTGTTAGCAGGAATCTTTTAAAATTAGGTTCTTAG 37639
1 M K R T F Q P S T I V K K R K H - G F L S R N K T K T G K - 28
37640 GTTTTATACGCTTTCTCTTTTCTTATTCCTAATGCTTCTTTT 37681
29 A V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 39680
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
39681 TTTTATGAAAAAATAAAGGATAAA---ATTATTAATCGAAGATTATTAAAAGAAATAGTTACTAATCGTTCCCAATGAGCAATTTTAAAT 39767
1 M K R T F Q P S T I V K K R K H G F L S R N K T K - T G K A 29
39768 GTTTATAAATCCAGGAAATATAAAATGCTTCATTCTTTT 39806
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 40070
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
40071 CGTAAAGT-ATTATACATAAATTATTACTGGTATTTCACAGAAAGAAT---TACCAGTCTTATAGTGGCATTCATGAT---ACTATCATA 40153
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
40154 GCAGAAAAACGGCTGTCATTTACCAGGATGAGTTAC 40189
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 40070
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
40071 CGTAAAGT-ATTATACATAAATTATTACTGGTATTTCACAGAAAGAAT---TACCAGTCTTATAGTGGCATTCATGAT---ACTATCATA 40153
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
40154 GCAGAAAAACGGCTGTCATTTACCAGGATGAGTTAC 40189
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 40475
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.31
40476 GTTAAAAAGCTTTTTAATAATAATTTTGTTTACTTAAATACCTTCAATGCTATTATTTCATTAAATTGTAATAAAGATAAGAAGAGGCAA 40565
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
40566 TATCATATAAAAATTTCAGCTATAGTTTGCCAGATA 40601
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 41785
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
41786 GTAAAGATGTCCTTTGAAATATAATCAGTTAATATTCGACGAAATCATTAGTATTGTTCTATTAGAAAAAAATATACC---AAATAAATC 41872
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
41873 GTAATTTCACGTTCAAGCCAAATGCTGATGGAAATA 41908
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 41940
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
41941 TTTTTATATTTTCTTCGACCTTTATTTTTGTACGATAAAGTC---TACCTCTACAAAAGTTTTAAGCATTATCAAAA-AATTACTTCATC 42026
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
42027 TTACTCCGAATGGTCTTTGTAAATAGGAAAACACTT 42062
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 42444
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
42445 ATGCAGCTTGTGCTACAAATAACCACAAGCTTTAGCACTTCTAATCGAGCATTAATGTA-GAA---CGTTTAGACCTTTATATTCTAATA 42530
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
42531 AACCACAGAAGATTTAAAAAAAACTCCTCATCAAGA 42566
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 42545
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
42546 TTCTTTTTGGAATATCAAATATCGAACGTAATTTGTCTTTCAACTAAGCTCTTACTAAACGGTAAAAACACGCCCACACCTGATGGAAAA 42635
1 M K R T F Q P S T I V K K R K H G F L S - R N - K T K T G K 28
42636 ATAATATCAACGAAGAGAATG---CAGCTTGTGCTACAAATA 42674
29 A V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 42958
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
42959 TATTACGAAACATTTTCA---AATTTAATTACGCAAATCCATAAAAC-GATGCTCAGATAAAGCATTTCGTTAGTATGAAAAAAATCTCT 43044
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
43045 CTTTTTAAACGAGCAACAAAGTTAGAGATACTTGTT 43080
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 43672
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
43673 TTCCGTGCAAATTTTGTTGATAAATTAATCAAGCTCGTTATTTCTAAAAACAAAACAATAAGTTATTTAGTACCTAAGATAGGAAAAAAA 43762
1 M K R T F Q P S T I - V K K R K H G F L S R N K T K T G K A 29
43763 ATTCTTTGTTACTCAAAA---AATAATCTTAAAACATAT 43798
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 43750
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.21
43751 TTAAGAAAATTATTCACTCCTATTCATAAACTATCTTTAGAAAGAAAATCCTTTTTTTCTAGAACATCGTGCTGATGTTTATTTTTCCGT 43840
1 M K R T F Q P S T I V K K R K H G F L S R N K T - K T - G K 28
43841 GCAAATTTTGTTGATAAATTAATCAAGCTCGTTATTTCTAAA 43882
29 A V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44171
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
44172 GAACGATTACCTTATATTATTAATGATACAATATCTTGGAGAATGTTAATCTTTATTTTTTTATTTAATGATACATATATTCAAAATATA 44261
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
44262 ATAAAAATAGT-TTACTTTACGATTTAAAAAGTATA 44296
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44377
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
44378 ATGATTGTTACTTTT---CCTTCTATTTTTATTCAAGGAATTGATGCTCATATTTTCCATAAGTGTTTGAATAA-TATTCATATGCTCAT 44463
1 M K R T F Q P S T I V K K - R K H G F L S R N K T K T G K A 29
44464 ATACTAGTATTTATTGTCTTGAAGGCTTATAATTCTATA 44502
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44577
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.50
44578 ATTAAAAG-CAATTTACGAGTGATATGGATGTTATCAAGATAAAGCTAAAATATTTATCCTGGGAAATGACTCAGGTAGAAAAACGAGTT 44666
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
44667 ACTCGACATCGTTTCTCTGTGCCTAATACAAAAGCG 44702
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44731
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
44732 ACGCGCAAACTTTTGAAAGGTGCTACAATGAAATTAGGTTATTCACAAGGTCAAGAGTTTCGG---GAGTTAGATTTTCAACAATATATT 44818
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
44819 GAAGATTATTATTCATCTAAAGGATTTAATAAAGTA 44854
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44824
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.36
44825 CGCGACGCTTTGTACAAAGCGTTTACTATAATACATGATTATATTAATAAT---ATT---AGAGCATATGATAGTTTACCTTCTGAGTTA 44908
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
44909 TTTACGCGCAAACTTTTGAAAGGT---GCTACAATG 44941
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45061
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
45062 ATTCAACGTAAATTTTTAGAATCCTTCTTTTTAAAGATTTTAAATAAATCGTTAGTAGAGTTTTTAAATCAAGAGAAATCTGAAACTTTG 45151
1 M K R T F Q P S T I V K K R K H G F L S - R N K T K T G K A 29
45152 GGATATGCTCTTTTTATATTGTGGACAGCACCTACATTC 45190
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45229
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 26 Length-adjusted: 0.62
45230 TATGCAAAAATCTTAATAGAAAGTTTAATAACTAAGAATTTTAAAAATCTGATATATGAGAAGGATGCTACATCAAGTGGCCTACAGATA 45319
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
45320 ATAGCGATGTTATTGGTTCAGAATCT-TCTGATATT 45354
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45234
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.38
45235 TATGCAAAAATCTTAATAGAAAGTTTAATAACTAAGAATTTTAAAAATCTGATATATGAGAAGGATGCTACATCAAGTGGCCTACAGATA 45324
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
45325 ATAGCGATG---TTATTGGTT---CAGAATCTTCTG 45354
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45464
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
45465 TTGTTCGAGTATTACAAAAACGGTTATATTATTATTCAT---TCTCATTTCTTTATGAACCCTGTACTTTCTTTTACCTATACGTTCGGG 45551
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
45552 ATAAAGGAAAATATTACCACTATAGAACAATATATC 45587
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45521
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.40
45522 GATAAATATAATTTTAAAGAAACAAAGTACTTAGCTCAACAACAGCAAGCATTTTGTTTGTTCGAGTATTACAAAAACGGTTATATTATT 45611
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
45612 ATTCATTCTCATTTCTTTATGAAC---CCTGTACTT 45644
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45734
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.40
45735 ATTAAAAGG---TGGGCTAGACATATCAAATATAAAATTCTGCATAATGGTTTCGATCTTGTTAGGAAAAATTTCAAAATAACACAAAAA 45821
1 M K R T F Q P S T I V K K R K H G F - L S R N K T K T G K A 29
45822 TTATTATTTCAAGAAATCTTGTATAATGAAACAAAGTTT 45860
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45788
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
45789 CTAGCATTTTTGATAAGT---TCATTGATTATTAAACGCCC-ATCCACTTTCATATTAAAAGGTGGGCTAGACATATCAAATATAAAATT 45874
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
45875 CTGCATAATGGTTTCGATCTTGTTAGGAAAAATTTC 45910
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45865
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
45866 AACACGTTAGCTCTTTTACCGCTAACAAGAATATATACAGAAAATAGATATTTTTTTTCA---GGATTCTTGAGTTGC---CTAGCATTT 45949
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
45950 TTGATAAGTTCATTGATTATTAAACGCCCATCCACT 45985
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 46030
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.29
46031 GTATCCGAAAATTCGGAGCCGTTTAAAACTTTCGATAAACGAGTACGTATACTTTCAAAACGTTTAAGGACTCTTTTTAGTATAGTATAT 46120
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
46121 TTCTTATCCCCAATCTTAGCCAATTTTGAATCGTTT 46156
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 46298
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
46299 ATTAACAACAGCTTTAGAAGGATCTATTTTATTTTT---AGATTTTTTAGGTTTAGATAAATCAATAAGTTTAGCACTTTCAATAGCTTG 46385
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
46386 AGCCAATTTATCTTTATCCGTATTCATAAGAATATC 46421
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47416
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.57
47417 ATGAAATAAAAA---CAAAAACAAACTCTAATCAAATCTGGGATATTGCAACCCTTTTACATTTCTAATAAAAGTACCTTTAAAAAGAAG 47503
1 M K R T F Q P S T I V K K R - K H G F L S R N K T K T G K A 29
47504 AGCTTAAGTTATTGCCTACAGCTAAAACGAAAAAGTTAC 47542
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47580
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
47581 ACAAAAGTGGGTGAACAATTCAAAATTAAGATTCAATTTGAAAGACGGAATATTCTAAATGCAGGACATACTAAAATAAAATCTACCCCA 47670
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
47671 TATTGGATAATCTTATTAAAGAGT---ATAACGATC 47703
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47906
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.38
47907 TTGAAAGATAATAAAGATGAGAC-AGCATACAAAAGAATAATTCCACAAAATTGGAATGCAAAAACTCGTCAAGATATGATAAC---GTA 47992
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
47993 TTTGGACGTTTATATTTCCGAAGAAGAAGCTCTATT 48028
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 48112
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.21
48113 CTTTCGTCTAGTGGTAAGACATCAGATTT-TCAGTTTGTAGACGAGAGTCGATTCTCTCAAGGGGCAAAATA------GGAGAAATAGTT 48195
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
48196 ATGGAAGCA---TTTATGAAGTATAAGGATTCCAGA 48228
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 48189
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
48190 ACAAAGGAAGCTTTGTTCTATAGTTTAGTGGTAAAACGTGTGCCTCATGAGTTAAATCGGTAGTTCGATTCTACTAGAACCAAAGTAGCC 48279
1 M K R T F Q P S T I V K K R K H G F L S - R N K T K T G K A 29
48280 CTTTCGTCTAGTGGTAAGACATCAGATTTTCAGTTTGTA 48318
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 48880
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.19
48881 TTAAAATTTGCTTTCCTA---TGCTATATAATATATAAGCTTGCTTTTTCATTTATCTCGTTGATCCATGAT---ACA---AAA---GTA 48958
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
48959 CTTTGGTATTTTTCCTTGAAAAACATCAAATGCTTT 48994
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 49005
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.29
49006 GCCTCACCCCTAATCACAAGTCATCCCATTCTATGCAACAGAAAA---GGGTTCATCCTCCAAAA-GTTGTTAACTCATTTCAATCTCTC 49091
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
49092 ATGATTAGATCACTAGTTTCGGGTTTAAATGAAAAA 49127
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 49023
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.31
49024 CTATCTCCTAGTTTGATTAGCCTCACCCCTAATCACAAGTCATCCCATTCT---ATGCAACAGAAAAGGGTTCATCCTCCAAAAGTTGTT 49110
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
49111 AACTCATTTCAATCTCTCATGATTAGATCACTAGTT 49146
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 49894
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
49895 ATTTCACGAGTAATTTTCTATAAAGAAAATGAAAGAAAATACTGT---GC-TTTATATCATATAATTTCTTTGATACTCTAACTCTTATG 49980
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
49981 GTATTTACGCTTGTTATAAAAACAAGGAAAATTATA 50016
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 49965
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
49966 ATATTTATACTTAGCAGTCCTGTGTTTTTAATAAACAGTCGCTACCCTCTATTCTGTGCCATCACACAT---AAGATTTCACGAGTAATT 50052
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
50053 TTCTATAAAGAAAATGAAAGAAAATACTGTGCTTTA 50088
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 50510
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
50511 ATAAATCCCTGAATGAATTGTCATTCAAACAGTCAACAAGTATTAGCCCTTGCGCTATCGTGTAATAAATCTAAACGTAACAAATCTTTT 50600
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
50601 GTACGCACTCCGTTACATTTGGGAGGCTACCGCCCCAGT 50639
31 L K R R L - L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 50646
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.31
50647 CGACATCGAGTGCCAAACAATTCCGTCATAGGTACTCTAAGGAATTATCACCTGTTATCCCCGGAT---ACCTTTTATTCGTTGGCAATC 50733
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
50734 CTACGCCCACAGGTTAAGATTGGATTACTAGGACCA 50769
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 50722
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
50723 TCTAAACCCACTCACGTACCACTATTAATCGGTAACAACCGAACCCTTGAGGCCCTTTTCAGTCTCAGATGTGATGAGCCGACATCGAGT 50812
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
50813 GCCAAACAATTCCGTCATAGGTACTCTAAGGAATTA 50848
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 50814
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
50815 AACCAGAGAATCGTTCCACCAGTCCTTTCTACTAGACAGAACAACTTTTACGTCTTATGAAATAGTAATAGGGACCGAACTGTCTCACAC 50904
1 M K R T F Q P S T I V K K R K H G F L - S R N K T K T G K A 29
50905 GTTCTAAACCCA---CTCACGTACCACTATTAATCGGTA 50940
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 50934
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
50935 ATGAGCCTATTGACGTTATAGTCTACAACGTTAAAAAGACTTAAAGTATTATTTCTCGCTTAGATGCTTTCAGCGATTAATAAAAGATTC 51024
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
51025 GTAGCGAATAGCGTGCGCAAACAGCTCAAAAACCAG 51060
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 51324
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
51325 ACGCCACGCTCATATAAGCGTTCGACTACATGTATCAAGTAAGTTGCTAGCATTCTCTCG---AGCCAGGATCAAACT---CATTATTAT 51408
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
51409 ATTAAAACGTCCTTTTTAAATTTAAGTATTCTACTA 51444
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 51480
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
51481 TTTCCACGCGGCTGTACATCCTCTCAACCAGCTAGAGATCATCGGCTTGTAGGCTTTTATCTTACCAACAACCTAATCTCACAAAACCTT 51570
1 M K R T F Q P S T I V K - K R K H G F L S R N K T K T G K A 29
51571 ACATTCAGCATATAATCTTTTAAATCTAGGATTTCCCTT 51609
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 51788
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
51789 ATAAATAGATATATACTAACTACAGTCATTATAAT-CGTAAAAAAAGGGGT---TTA---AGACAACTTGCCTCTACTAGAAAGGCACGC 51871
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
51872 TACAGAAGACACAGATAAAAATCTCTTTTTACGGAA 51907
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 51809
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.33
51810 CAAAATGTAATTTACCAACCCTCATCTTG-ATAAATAGATATATACT-AACTACAGTCATTATAATCGTAAAAAAAGGGGTTTAAGACAA 51897
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G - K A 29
51898 CTTGCCTCTACTAGAAAGGCACGCTACAGAAGACACAGA 51936
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 51952
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
51953 TGCCTACGTACCCTACGCCCAGTCATCACGAATAACACTAACCCCCC-CCGTTTTACCGCGGCTGCTGCACGAAGTTAGCCGGGTTTGAT 52041
1 M K R T F Q P S T I V K K R K H G F L S R N K T K - T G K A 29
52042 ATTTTTAAGCAAAGCAGCATAAGGCATTTTTGCTCGAGT 52080
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 52413
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
52414 TTCAACAGAAAGAAGAAGGCTAACCAAATAAATGGCTAACGAAAAGAAACCAATACAAAAATTGGTAAGGTTTTGCGCGGTATTCGAATT 52503
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
52504 ---AAACCACATCTCCACCCCTTGTATAAGTCACCG 52536
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 53072
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
53073 TTACACAAAGTGCTTGCTAAAGTTGTAATTTTTAATAATGGTCCAGCAGCAGATTCTTCTACCACTACCCTGTCGACTTTACTCCAGTCC 53162
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
53163 CTAAATAAAGATCGTGTACAAAGCCAACAGAATGTC 53198
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 53605
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.24
53606 TTAGAGCGAATATTT------TCAAATATTGTATCCAATGAAGCAAAAGATTTTATACAAAAAAATAAAATTGATAGAAATATAGAATAA 53689
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
53690 ATAATAATTTCTTGATTTAAAATTATGAATTCTTTT 53725
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 53971
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
53972 TTGAACAGAGTATCATCACCAAAAATAATACAACCACTTGTTCAGCT-TCTAGATTAAGAGC-CATACCGTTAAACCCTTAGAATAAATT 54059
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
54060 CTACCATTTCACCTACTTGAATATTATCAATCCTGT 54095
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 54081
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
54082 CAAAAGCATAGTTTCACCACCATCGATAAATTACCAATACCATCACAACACGACCTAATAAGCCATAACCTACAGGGTTTTGACTAAGTA 54171
1 M K R T F Q P - S T I V K K R K H G F L S R N K T K T G K A 29
54172 TTTAAAGCACGACAGAATCATCTTGTTGAACAGAGTATC 54210
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 54661
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.33
54662 GTAAAGCGTTAA---AGAACCTCCACCGAAATTAGTTTAAGTTTGCATGCT---CTTTCTAAAAGTCTGAATGAGCATAAAAACATCACC 54745
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
54746 TGGAAAGCTTCACGTCCTGGTGGGCGTCTTAATATA 54781
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 55241
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
55242 ATGGATTTATAGAATTCCGGTTCAAAACTTCTTAAAATAAATAATAATGGATTTCAGCAAATCCAAAATCGGCTTTATCAAAGAATGATA 55331
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
55332 AATATTCATAGAATGATAGAATAATTCAGCTCGTTC 55367
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 55627
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
55628 GCTCCTTTTCTATTTCTGATGGAATTTATGGTTCAGTTTTTATATGTTAACAGGTTTTCATGGAATTCATGTTCTTATGGTACTATCTTT 55717
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
55718 ATTGTGTTCAATTTGTTCGTCTTACAAAGATCATTT 55753
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 57057
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.10
57058 AAAAAAATTCTCTATATTCGATCTAACTATGCTTACCTCTACAAAAAAACCTTTACAAGTTAGAATGGG---AAA---GGAAAAGGGTCA 57141
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
57142 ATAGATAAATGGGTTTTTGCTGCTAATAAATTAGAG 57177
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 57090
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.29
57091 AACAAAAATTCAGTGACAGACTAGAAGACCTAGAGTAAACAAAAAAAATTCTCTATATTCGATCTAACTATGCTTACCTCTACAAAAAAA 57180
1 M K R T F Q P - S T I V K K R K H G F L S R N K T K T G K A 29
57181 CCTTTACAAGTTAGAATGGG-AAAGGAAAAGGGTCAATA 57218
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 57252
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.07
57253 AATAAAGGCATTTTTCTTAGCGCTTTTCTGTAGGTGTTGACTTAAAGCAAGAGATATTTATCTTATGAACAGTTAGAGACTGCACGTAGA 57342
1 M K R T F Q P S T I - V K K R K H G F L S R N K T K T G K A 29
57343 GTTATA---CA-CGTTTAGTTAAG---CTAAAGAGCTTA 57374
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 57557
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
57558 ATAATTCGTTACTATAAACG-CGTAGTGCCATTGAGGTTTCAGATTTATATTTCAGGTCGTTTAACCGTAAAGAACGTGCAGCATATATG 57646
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
57647 TTAAAGCAT---ATA---AAGTATGCCTTTAGCTAC 57676
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 58588
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
58589 TTTATAAGAAGT---GAAAAAAAT---GTTTTAAAATATTCAGCACTTATGTTTCTTATACATAAGAAGAAATATTAATCTAGAAAATTA 58672
1 M K R T F Q P S T I V K K R K H G F L S R N K T K - T G K A 29
58673 GAACTTGAAAAGATAAAATTAAACCTATCGAAATCCTTT 58711
30 V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 58948
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.14
58949 TTTATTAAAAGTTTTAAACCATCAGCAAGGGTTGCAATATTCCAAACC---TATAACATTAGGTCCTCGACGTATTTAATCGCGGCCATA 59035
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
59036 TTT---TACGTTCTAGTAAGGTTAAAGTAGCTACTA 59068
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59095
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.26
59096 ATGAGGAAAAGCAAGAAATACTAATATATAAGATTAGGAGAGCAACATAATGCTCTTCAAATGTATTACAGACCACTAGCAAAACTTAAT 59185
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
59186 ATAAAAAGAGTACTGGTGATAATAAAAATACCATTT 59221
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59289
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
59290 GTGCTAAAGTATTATAAACCAAGTATTGTTTGAGCATTACAATATCAACAAAATTAAAGATTGAGCCAAAATACAACTAATAAAATTAAT 59379
1 M K R T F Q P S T I - V K K R K H G - F L S R N K T K T G K 28
59380 AGG---CTTAAACAAGTTCATAAGAAATCATCTGAGATGCTA 59418
29 A V L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59453
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.17
59454 AACGACCAAATATTAAATTACATATTCTGCAATAAAATAAAAAGCAAAGGACCACTAGAATATTCACACTATAACCTGCAACAAGTTCAC 59543
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
59544 TTCAGCTTCAGGCAATCAAAAGGAGTACGATTAGTT 59579
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59591
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.12
59592 ATATCTCGGAGTGCTGCTCT-AATCAACAAAATAAAGCTAGGATAAACATTATTTTAAAGCA-AATAAAATAAAACCATTTAAAAAGGAA 59679
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
59680 ATA---AGAAACTTGGAACCATCCTCCAAGAAAAAG 59712
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 60621
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.05
60622 GGTTCATACTTTTTTCCGCCGATTATTATGGTGCT-CGGAGTAATTATTTTATTATTAATGATTATTACTTCTTTTTAGGATATGTTTTA 60710
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
60711 CTTGGGGACAAATGTCTTATTGGGCAGCTACGTTAT 60746
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 61351
Protein: lcl|KC353356.1_cdsid_AGH24298.1 [gene=rpl34] [protein=ribosomal protein L34] [protein_id=AGH24298.1] [location=complement(43482..43610)] @ 0
DNA length: 252 Protein length: 42
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.60
61352 CAAAAAGAATCAAAAAAGCCATCATCA------AAGCCAAAAGGCCACAGCTTC---AGTTACAGCAAACCCAAG------CATGCATAC 61426
1 M K R T F Q P S T I V K K R K H G F L S R N K T K T G K A V 30
61427 TTAAATAAGCGTTGTTCTTCTGCCGATTACGGCTTA 61462
31 L K R R L L K G R K S I 42
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 76
Protein: lcl|KC353356.1_cdsid_AGH24300.1 [gene=ccmC] [protein=ABC transporter subunit C] [protein_id=AGH24300.1] [location=complement(45599..46351)] @ 0
DNA length: 1500 Protein length: 250
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 28 Length-adjusted: 0.11
77 GTTAAAACAAGAAAAGCTATTGCTTCAATGACTGAATGGAATCCCTTCTTAAGAGATAAGGTTCAAAAAGCTATACATAGCTCCTTGTCC 166
1 M N N I Q P I K K K F E Y D P Y I K - I I K P S N L M Y I T 29
167 CATATATTACCTGATTCTTCCGAAATATT-ATGATAACATATCTTTTACTTAATTCCTTTTTATTGATTAAACTTATTTTATTTATTTTA 255
30 N I L L P I L F F C A I S - L L I A S L Y L G I F I A D T D 58
256 ATTAGAATTTTTCTAATTCCAAATATTTTTTCTAAATATATAATTATTATTTTTTTTAGTATTATTATATACATATGTTATAAATATCCT 345
59 I Q Q G E N Y R I I Y I H V P S A W T C L L L Y I L L T I S 88
346 CGTACCAAT---ATATTAATTAAGGAAGATTTATTCGAATATGCTTTAAAAACA---ACTAAAGAAAAAATGATA---AAT---ATATGT 423
89 S T I F I V I K N P I A L F V S K S F A K M G I L F T F I T 118
424 ATCATAACGTTATATATATTTACTTTT---GTTATAGGTATATTTTATCTTAGATATATAAATATAACAAAAAAAGTAGACTTAAAAATT 510
119 L L T G S L W G Y P V W G T F W V W D A R L T S V L I L F F 148
511 TATTATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAAGAAGAAATTATTTTAAATGTGGTAATAATAATAACTTTTATAATAATT 600
149 I Y L I I W S F F L S N D E K T N K I G T I L T L I F F A I 178
601 TATATTTTTATAATATATAAATTTACTCAATATTTTAAATTACA-AGTAATTAAAAGACATCTTTACTTAATAGGAATACCATTAAATAA 689
179 I P I I K Y S V D W W T T L H Q G - S S I T Q F K N T I H - 206
690 TAATTGGTATTCAACCGTTCATCGAAAGTATTTATGGCCTTTAG-CAAATTCTTTTCTTAAAATAAGTATAAAACATAAAATTGAGTTAT 778
207 F S I L L P T S F M Y M S F L F L I F Y I L I C D L R K D I 236
779 TGTATAAAAAATATTATTTTGATAAAAAGCCTCATAAACCAA 820
237 L I K K I T I I K D L Q N K 250
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9685
Protein: lcl|KC353356.1_cdsid_AGH24300.1 [gene=ccmC] [protein=ABC transporter subunit C] [protein_id=AGH24300.1] [location=complement(45599..46351)] @ 0
DNA length: 1500 Protein length: 250
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.06
9686 ATGAAAGTAATAAATTTTATAAACAAAAAATGT---TATTAATAAAAGATA---CTTATAATGTTTAACAAATTATTTTTCATATTACAG 9769
1 M N N I Q P I K K K F E Y D P Y I K I I K P S N L M Y I T N 30
9770 ATATTAATAAAATTTAAATATTATTTCATGATA---TTTATTGTTTTAACACTAAGTTTA---TGTTTTGCAATTATTATACATTATAAT 9853
31 I L L P I L F F C A I S L L I A S L Y L G I F I A D T D I Q 60
9854 TATAATAAAAATAAAAAACTACTA---ATTAATAAAAAACAAGAGCTTTCTAAACTATTAGATTATTTATATATCAAAGATATAAAAATG 9940
61 Q G E N Y R I I Y I H V P S A W T C L L L Y I L L - T I S S 89
9941 GAAATATTAGATTTATTTTTATTAAACTTATTTACAATAGGATTGATTTTTTCCTTAAGAAATCTTAATATTGGAGCAACCATAAATATT 10030
90 T I F - I V I K N P I A L F V S K S F A K M G I L F T F - I 117
10031 TTCTTATTTCGACCAAGTCTTGTAATATTATCGCAAATTATTTCACTTTGTGTATTAATGTATGTTTTTTACATTTATAACTTAGTTATA 10120
118 T L L T G S L W G Y - P V W G T F W V W D A R L T S V L I L 146
10121 AAATACAAATTTTACAAAATTTAT---TTATTTATGTGCCAATTTGAAACTTTTATAAAAATATGTGACATTTTTACAGGTGGATATCGA 10207
147 F F I Y L I I W S F F L S N D E K T N K I G T I L T L I F F 176
10208 TTCTATGAACTTTTATACGATAACTTACATGATTTTATTTATATTAAACTAAAACCAATTAATAAAATAAACTCTTCTTATTTACAAGTG 10297
177 A I I P I I K Y S V D W - W T T L H Q G S S I T Q F K N T I 205
10298 CTAATGATAATACTATGCAATAAGATCTTGTACATATATGCTTATATAAAAAATATCTTCTATATTTTACGAGCA---TTTTTTCCTGAA 10384
206 H F S I L L P T S F M Y M S F L F L I F Y I L I C D L R K D 235
10385 ATTTTATTATTT---ATAAGTTTGATATCTGATTTAAATAATAGA 10426
236 I L I K K I T I I K D L Q N K 250
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12784
Protein: lcl|KC353356.1_cdsid_AGH24300.1 [gene=ccmC] [protein=ABC transporter subunit C] [protein_id=AGH24300.1] [location=complement(45599..46351)] @ 0
DNA length: 1500 Protein length: 250
1 Nt shifts: 5 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.02
12785 TTACAGAATATGTCT---TT-AATAAAAAATTCAATATTATTTCTTGGATTTTAATATC-AAT---TCATTATTTATATTTTTAATA--- 12863
1 M N N I Q P I K K K F E Y D P Y I K I I K P S N L M Y I T N 30
12864 ATATTACAACCAAAATTTATTTTTATGGAAACCGAAATTTTATTT---AATCTACCATATAGTATA---GTAACTATAACTCAAATATAT 12947
31 I L L P I L F F C A I S L L I A S L Y L G I F I A D T D I Q 60
12948 ACTTCTCAAGAA---AAAATTATGTATTTGTTTCATATTTCGAATACTGTTTGTTTATTATTAAT-ATGGATATAAATATGAAAGAAAAT 13033
61 Q G E N Y R I I Y I H V P S A W T C L L L Y I L L T I S S T 90
13034 TTAACTTATATCATAAGACAAATAGACTTTGAATATTTAATAACTGATTATATTAAACTTAAAGATTTAAAAATTTATGTATATATGTTT 13123
91 I F I V I K N P I A L F V S K S F A K M G I L F T F I T L L 120
13124 ATAGAAAATTATGTCTATTTAGAACTTTG-TATCAATATTTT---TATAACAAAATAATAACAGAAGTTGTACAAGAATTTTCTTTATTG 13209
121 T G S L W G Y P V W G T F W V W D A R L T S V L I L F F I Y 150
13210 CATCAGTTATAT---TATTTTATG------------CGA---AATAGTATT---GTAATATTAAGTGTTATCCAA---ACTGTAGTATCT 13275
151 L I I W S F F L S N D E K T N K I G T I L T L I F F A I I P 180
13276 TTTGTACAA---AAGATTAATTTTATCCTTAAAATTAATCAAGTAGAAGGTATTTATCTTACTGTAAAAATTATTTATGAAAAAGGTTTG 13362
181 I I K Y S V D W W T T L H Q G S S I T Q F K N T I H F S I L 210
13363 CTT---AATAAGATGACTGAAACACAATTAAAAAC-ATTATTAGATATCATTTGGAAAAAAATAACAAGGAAATGATCTTATATCAAAAA 13448
211 L P T S F M Y M S F L F L I F Y I L I C D L R K D I L I K K 240
13449 ATAAAAATCATATGTATCTTTATAAAAAAA 13478
241 I T I I K D L Q N K 250
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12784
Protein: lcl|KC353356.1_cdsid_AGH24300.1 [gene=ccmC] [protein=ABC transporter subunit C] [protein_id=AGH24300.1] [location=complement(45599..46351)] @ 0
DNA length: 1500 Protein length: 250
1 Nt shifts: 5 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.02
12785 TTACAGAATATGTCT---TT-AATAAAAAATTCAATATTATTTCTTGGATTTTAATATC-AAT---TCATTATTTATATTTTTAATA--- 12863
1 M N N I Q P I K K K F E Y D P Y I K I I K P S N L M Y I T N 30
12864 ATATTACAACCAAAATTTATTTTTATGGAAACCGAAATTTTATTT---AATCTACCATATAGTATA---GTAACTATAACTCAAATATAT 12947
31 I L L P I L F F C A I S L L I A S L Y L G I F I A D T D I Q 60
12948 ACTTCTCAAGAA---AAAATTATGTATTTGTTTCATATTTCGAATACTGTTTGTTTATTATTAAT-ATGGATATAAATATGAAAGAAAAT 13033
61 Q G E N Y R I I Y I H V P S A W T C L L L Y I L L T I S S T 90
13034 TTAACTTATATCATAAGACAAATAGACTTTGAATATTTAATAACTGATTATATTAAACTTAAAGATTTAAAAATTTATGTATATATGTTT 13123
91 I F I V I K N P I A L F V S K S F A K M G I L F T F I T L L 120
13124 ATAGAAAATTATGTCTATTTAGAACTTTG-TATCAATATTTT---TATAACAAAATAATAACAGAAGTTGTACAAGAATTTTCTTTATTG 13209
121 T G S L W G Y P V W G T F W V W D A R L T S V L I L F F I Y 150
13210 CATCAGTTATAT---TATTTTATG------------CGA---AATAGTATT---GTAATATTAAGTGTTATCCAA---ACTGTAGTATCT 13275
151 L I I W S F F L S N D E K T N K I G T I L T L I F F A I I P 180
13276 TTTGTACAA---AAGATTAATTTTATCCTTAAAATTAATCAAGTAGAAGGTATTTATCTTACTGTAAAAATTATTTATGAAAAAGGTTTG 13362
181 I I K Y S V D W W T T L H Q G S S I T Q F K N T I H F S I L 210
13363 CTT---AATAAGATGACTGAAACACAATTAAAAAC-ATTATTAGATATCATTTGGAAAAAAATAACAAGGAAATGATCTTATATCAAAAA 13448
211 L P T S F M Y M S F L F L I F Y I L I C D L R K D I L I K K 240
13449 ATAAAAATCATATGTATCTTTATAAAAAAA 13478
241 I T I I K D L Q N K 250
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37062
Protein: lcl|KC353356.1_cdsid_AGH24300.1 [gene=ccmC] [protein=ABC transporter subunit C] [protein_id=AGH24300.1] [location=complement(45599..46351)] @ 0
DNA length: 1500 Protein length: 250
1 Nt shifts: 7 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.07
37063 ACTACTAATATTTTAGTAATAAAAGG-TTATTTATTGAAGATCA-TATCGAAAAGATATTATT---TCTTTTGTTTTTTATAGGATTAAG 37147
1 M N N I Q P I K K K F E Y D P Y I K I I K P S N L M Y I T N 30
37148 ATCAAAATTCCGATGATTCCTTTC---CATTTATGGCTTCCTAAAGCCATGTTGAAGCTCCTACTACG-GTAGTGTTTTGTTAG---CAG 37230
31 I L L P I L F F C A I S L L I A S L Y L G I F I A D T D I Q 60
37231 GAATCTTTTAAAATTAGGTTCTTAGGTTTTAT-ACGCTTTCTCTTTTCTTATTCCTAATGCTTCTTTTTATTTCTACCATTAATATTATA 37319
61 Q G E N Y R I I Y I H V P S A W T C L L L Y I L L T I S S T 90
37320 GTTGCTGTGATATCAATTATATTAGCTCTTTTACAGTTTACGTCAAAATGATTTAAAAAG---GATTATTGCTACTCATCTATTGCACAT 37406
91 I F I V - I K N P I A L F V S K S F A K M G I L F T F I T L 119
37407 ATGAAT---TTTTTAGTGGGCTATTTTTGTAAAAGATTTATTAGTTTAACAGGTTCTTTATTATTGCAAATGCTCATGGGTTTCTTCTTC 37493
120 L T G S L W G Y P V W G T F W V W D A R L T S V L I L F F I 149
37494 CGCTTTATTTTTAGCAATGGAATGTTATATGATGATAT-AAATCACGTAATATTTCTATTATCGTGGTTTGTTACTGTTATGCCAATATT 37582
150 Y L I I W S F F L S N D E K T N K I G T I L T L I F F A I I 179
37583 TTGTTTCTTCTTTTTTATTTT---TTCTTTAGCGAATTTAGGGTTTCTTCTACTGTTAATTTTATTCTGAAATGTTAATATTTTTTGGCT 37669
180 P I I K Y S V D W W T T L H Q G S S I T Q F K N T I H F S I 209
37670 TATTTCAAACAGTCCTTC---TAT---AGCTATTTAACTTTAAC-AGGTATTT-CTTATCTGCAGTTATTCTTTTGTTTTACTTACTCGC 37751
210 L L P T S F M Y M S F L F L I F Y I L I C D L R K D I L I K 239
37752 ATGCTTTTGGTCCTGCAAGCCATTTCTTTCTGT 37784
240 K I T I I K D L Q N K 250
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 432
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.08
433 TTATATATATTTACTTTTGTTATAGGTATATTTTATCTTAGATATATA---AATATAACAAAAAAAGTAGACTTAAAAATTTATTATATA 519
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
520 ATGCTAAAAAATCTTTTTACT---GAATTTACA---AAAGAAGAAATTATTTTAAATGTGGTAATAATAATAACTTTTATAATAATTTAT 603
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
604 ATTTTTATAATATATAAATTTACTCAATATTTTAAATTACAAGTAATTAAAAGACATCTTTACTTAATAGGAATA---CCATTAAATAAT 690
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
691 AATTGGTATTCAACCGTTCATCGAAAG---TATTTA---TGGCCTTTAGCAAATTCTTTTCTTAAAATA---AGTATAAAACATAAAATT 771
91 P L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F I 120
772 GAGTTATTGTATAAAAAATATTATTTTGATAAAAAGCCTCATAAACCAAGACCTGATAATTTTTTTTCT---TTATCTGAAGAGGCAAAA 858
121 L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I G 150
859 ATTTTATTTTTTAAAAATAATCCTACATTACCTGAATTACTTTTTCATAAATACAAGAAAATGTCTATTTTCATAGATAATATTTTAACA 948
151 S A L F I G Y K E K G I L L C L F I M P F Y L P I L I F T T 180
949 AAAGGTCATTATTTTATATTAATTATT---AGTATTCTATATGATGTTATAAATAATGATTTTATTTTGACTACTATATTTCAAATATTA 1035
181 N I L Q T I L I H E N I L N E V Y L F S F F F L C F L L V S 210
1036 CCTTGGATATTTTTTTATGAACTTTTTCTAAGAATATCTAAA 1077
211 P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7827
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.08
7828 CACCCTATGACTCTTGAACAACAGCAAAAAAAAGAAGTT---GAA---AAACAGAAAAATCAATT-ATTTCAACTACAAAATAAAAAATG 7910
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
7911 ATAGATATTATTTCAAGGATAATAAATTTAATAATTAAAAATATACATCGTTTATTTCCCGTATTTGGATTTATATTACTTTCATTATAT 8000
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
8001 ATTTGGGGTAGGTATATAAGAAATAGATTACCACGAGAAATACCTTTTGATTTAACATTATTACGTTTAATAATGTTAATTATAATATGT 8090
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
8091 AGTAGTTATATATATATAATTTATAGGCTTATTAAACCTAAAGTACCACCTCAATTTATACTTAATGTTTTGGTATCTATTATAAATACT 8180
91 P L Y K Y I V I K C F I K W F L V S I C L S - L G T I I G F 119
8181 GTAAAATCTTTTGACAATTATACGAAACAATTTAATCTTATTTCCAATACC---TATATAAAAATATTTACCTATATAGCAAATAAAATT 8267
120 I L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I 149
8268 AATTATTATAATGTCATTTTATGGGAAAAAATCTTACTTATTATAAATACTGTACCGCATATCATTTTACTTTCTGCTCTATTCATAGAT 8357
150 G S A L F I G Y K E K G I L L C L F I M P F Y L P I L I F T 179
8358 ACTTTTTATTTAGGTAAATTATTTTATTTTTATAAAGTCATT---TGGGTTACATTATTC---TTTTTCTTAATCCCATTTAGTTTATAT 8441
180 T N I L Q T I L I H E N I L N E V Y L F S F F F L C F L L V 209
8442 TCTTTTGACTATGTTTGTGAACACTATATAAATTATTGGGAAAAAAAT 8489
210 S - P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8174
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.03
8175 AATACTGTAAAATCTTTTGACAATTATACGAAA---CAATTTAATCTTATTTCC---AATACCTATATAAAAATATTTACCTATATAGCA 8258
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
8259 AATAAAATTAATTATTATAATGTCATTTTATGGGAAAAAATCTTACTTATTATAAATACTGTACCGCATATCATTTTACTTTCTGCTCTA 8348
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
8349 TTCATAGATACTTTTTATTTAGGTAAATTATTTTATTTT---TAT---AAAGT-CATTTG---GGTTACATTATTCTT---TTTCTTAAT 8425
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
8426 CCCATTTA-GTTTATATTCTTTTGACTATGTTTGTGAACACTATATAAATT---ATTGGGAAAAAAATTCTGAAAATGTATGGA---CAA 8508
91 P L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F I 120
8509 CATATAAACCAAATGTCTTACCTCCTGAATTAGATTTTTGGCATCCTGATTATAATGAGGATGATGATGATGAATGTATTCCGCCTA--- 8595
121 L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I G 150
8596 ---ATGATATGGAGATCTCTTTTAGAACATTTATTCCTACTTATTTTGATGAGATATATTACGAGCAAAAAACACCTCATTTTTATTAT- 8681
151 S A L F I G Y K E K G I L L C L F I M P F Y L P I L I F T T 180
8682 ATTATACGTCCAACAATAGAATGGTATAATAATTTATTTAAAGAA---TATAATGTTACCTGGAAATCT---TGTGGAGATATAAAAAAC 8765
181 N I L Q T I L I H E N I L N E V Y L F S F F F L C F L L V S 210
8766 ACCATTATCGAAAAGGAT---CTTAATTTAATAATTAGATTA 8804
211 P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9013
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.03
9014 AAAATTATGTATATTTTTATTAATTAT---AATTTTTTATA-ATGAAAAAGAACAAAAAG---ATAATTAATATTATGATAATATGGGTT 9096
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
9097 TTACTTACAGATAGAGTAAAAGAAAGGAATATGCAAAATTACAGAAAATCTTCTTATTCAAAAAAACTACTTTATACAATATACATTCCA 9186
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
9187 AAAATATCAGGAGTTACTCTACCCGAATATCCTTTAAAAGATGTTCAAAAAGCTAATTTTATCCAGTTCTTTAATAGTATAGTTAAAAAT 9276
61 L T T L F I L N R F F I E D Q D E G H L L Q - Y N L L Q Y K 89
9277 GACCCAATATGGGATAATTTATGT---CAAACATATAATAAA---GTAAATTCTTCATTTTTTTATCAA---AAAATTAAAGATGCTTAT 9357
90 S P L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F 119
9358 ATTAACTTAACTTTACAAACAGCTCATTATAAAGAACAAATAGCTATTTATTTA------TCATTTATCTTAAAATTGATTGA-AATGCA 9440
120 I L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I 149
9441 CCCTCAAATACCTATTAAAGATATGTGCTTAAAAGCAGTCAATTATG-ATGTTTATTTTGACATAA---ATGAGCAGGATAGTTTTTATG 9526
150 G S A L F I G Y K E K G I L L C L F I M P F Y L P I L I F T 179
9527 TTACAATAA---AACAGAATCCTTATA---GTC---CTATTGAAATTAGTCTTCAACATG---ATAATATTTGTTTGCACACTTTCCATT 9604
180 T N I L Q T I L I H E N I L N E V Y L F S F F F L C F L L V 209
9605 TATTACTTATTGAAGAAATATTTCTACAAAACTTTCAAGATAATA 9649
210 S P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9871
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 44 Length-adjusted: 0.20
9872 CTACTAATTAATAAAAAACAAGAGCTTTCTAAACTATTAGATTATTTATATATCAAA---GATATAAAAATGGAAATATTA---GATTTA 9955
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
9956 TTTTTATTAAACTTATTTACAATAGGATTGATTTTTTCCTTAAGAAATCTT---AATATTGGAGCAACCATA---AATATTTTCTTATTT 10039
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
10040 CGACCAAGTCTTGTAATATTATCGCAAATTATTTCACTTTGTGTATTAATGTATGTTTTTTACATTTATAACTTAGTT---ATAAAATAC 10126
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
10127 AAATTTTACAAAATTTATTTATTTATGTGCCAATTTGAAACTTTT---ATAAAAATATGT---GACATTTTTACAGGT---GGATATCGA 10207
91 P L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F I 120
10208 TTCTATGAACTTTTATACGATAACTTACATGATTTTATTTATATTAAACTAAAA---CCAATTAATAAAATA---AACTCTTCTTATTTA 10291
121 L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I G 150
10292 CAAGTGCTAATGATAATACTATGCAATAAGATCTTGTACATATATGCTTATATAAAAAATATCTTCTATATTTTACGAGCATTTTTTCCT 10381
151 S A L F I G Y K E K G I L L C L F I M P F Y L P I L I F T T 180
10382 GAAATTTTATTATTTATAAGTTTGATATCTGAT---TTAAATAATAGAGAAATAAAAACATTTTATTATATC------TTAGCTATATAC 10462
181 N I L Q T I L I H E N I L N E V Y L F S F F F L C F L L V S 210
10463 CCATTAATGACATCTTATAGGACCATTAAAGAAATTCTAGGAGAC 10507
211 P I I C T Y - C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10360
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.09
10361 ATTTTACGAGCATTTTTTCCTGAAATTTTATTATTTATAAGTTTGATATCTGATTTAAATAATAGA---GAAATAAAAACATTTTATTAT 10447
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
10448 ATCTTAGCTATATAC---CCATTAATGACATCTTATAGGACCATTAAAGAAATTCTAGGAGACTATGATATGTTAAATATAAATGATAAA 10534
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
10535 TTAACTACATATTTTTATGAAGATAAAATACACGATAAATTGAGAAAAACAATAAGTGAATATGAACGTACTAGAATATTAATACAAAGT 10624
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
10625 ATGACTCTTTATTATAAATATGATAAACAGATAAGAGAATATATATTAAGAGATTTCAAAAGAATATATCAGCCATATAGTATGCGTTTA 10714
91 P L Y K Y I V I K C F I K W F L V S I C - L S L G T I I G F 119
10715 ATCTTTTTAGGAATATTAATATTATATTATAATTTTTGTTATAGT---ATGTCATACTATAATTGCATGATAATAACAATACCTTTATTA 10801
120 I L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I 149
10802 TTAAGT------TTTATATTATATGAGCATAGTTATCAATATTTAGTGAATTTTAGATATTTATGGATAATAAAAATATTATATTATACT 10885
150 G S A L F I G Y K E K G I L L C L F I M P F Y L P I L I F T 179
10886 AATTTAATATTGGTAAT-ATATATATTTATAATAATATATTTGTCAAGGAATACATTATA---TTTTATAACCG-ATAATATACATATAT 10970
180 T N I L Q T I L I H E N I L N E V Y L F S F F F L C F L L V 209
10971 TCA---ATTTTGAACTTATTCAAG---AATTTAGCCAAAAAGAAA 11009
210 S P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11393
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.04
11394 AACAGATCCTTCTTCACACAAAAAATGATAGAATGGTTA---TCTATTGATGGTCCACAAGATAACGTAATATTCTTATTAAAATACTTG 11480
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
11481 ATTTTCTTCATAAAACGATGTTTAGAATGAGAATTAATGTTTTTCCCTTTTAAAAATTTAAATATGTTAAACATTCTAATTTTAATTATA 11570
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
11571 GTGTTATTTTTAACAATTAAAATAATATCTTTTATTAAAAATAAAAGGTATCCAAAATTA---TCTGTGAATGAATATAAA---AAATCT 11654
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
11655 CCT------GAA---TTATTATTAGAATATTTAAATAAATATTATGTAACTAACATTTATTATAGTATTTTTAAAATAATTATATATGTT 11735
91 P L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F I 120
11736 TTTTAA---ATTAAGTATTATTTTTTATTTACGTTATTT---ATATTT---AG-GTCAAAATTTTATGTTATATAAGTCAGAAAATA--- 11812
121 L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I G 150
11813 ---GTATTATATATCTCTCTTCAT---------TTAGTCGATTGTTA-TTT---ATGAGCATTTTAATTATAATTGTTATTTATAATTTT 11886
151 S A L F I G Y K E K G I L L C L F I M P F Y L P I L I F T T 180
11887 TATAAACTTTTGGATATTATTTTTTTTGATGAAATTTTA---AAACTATATCTCTATTTTTTTAGGCATAAATTTAATGACAAAATGCGA 11973
181 N I L Q T I L I H E N I L N E V Y L F S F F F L C F L L V S 210
11974 CTTTTTGTAATAGCATATTCTATAAGAAATATTTGGGGACCTATT 12018
211 P I I C T Y C L K - L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11940
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 34 Length-adjusted: 0.15
11941 TTTTTTAGGCATAAATTTAATGACAAAATGCGACTTTTTGTAATAGCATATTCTATAAGAAATATTTGGGGACCTATTTATTTATTTTTT 12030
1 M I L F L F Q S Y Y Q - F L F T I K N K N D Y I N A I L F Y 29
12031 GATAGTATATGTAATTTTACACCGATTCCTGATGAATATTATTATGATGAT---CATTATATATATGATTGGATTTATAATTATACT--- 12114
30 L I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C 59
12115 TTTGTTACAAAATTATCA---CTAAATTTATTTATATATCAAAACACTTTTATGATACATTTATTTTTTAAATGTAGTAAGAAAATGTTT 12201
60 F L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K 89
12202 CGTTTGTTATATATTCATTTACATTTTGATGCCTTTGGCAAATATTTACATATT---TTATTATTAAGTATAGTTATTATTTATGAGATA 12288
90 S P L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F 119
12289 ATTCATACTAATATGTATTATACTTATTATATGCTTTTTATTACTTACATAATTAATGTAATATATAAATATTATATTTTTGAGAAAAAA 12378
120 I L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I 149
12379 AAAGATTTTATGTTTGATGGCTTGCTTAATAAAAATTTTTATAATGTACAATATTTTATATTTGCTAATAACAAAAGTACTTTAAACATG 12468
150 G S A L F I G Y K E K G I L - L C L F I M P F Y L P I L I F 178
12469 AAAACCAATATA---GATTATTTATATTTTATGGAAAAATTAAAAGAAGAAACTACTATT---AAATATATTTTAAATGATTTTGAACAA 12552
179 T T N I L Q T I L I H E N I L N E V Y L F S F F F L C F L L 208
12553 GTACCAGAAGAGTTAGTCAATAAACAAATAAATCAAATGTACTTACGT 12600
209 V S P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12519
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 40 Length-adjusted: 0.18
12520 ACTATTAAATATATTTTAAATGATTTTGAACAAGTACCAGAAGAGTTAGTCAATAAACAAATAAATCAAATGTACTTACGTTTTAGTATA 12609
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
12610 ATACTAATATTACTTTTTATGACAATTTTTCTTTATGAT---GTTATTAGATATTCTATAATAATAAAAATACTTAATTACAATATATAT 12696
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
12697 ---TCTTTTTTTATTCTATTGCCATTAATTTTTATATTATATTCAGCAACTAAAATTTTTACTTTGTCTAATACAGCTGAAATTGATGAT 12783
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
12784 ---TTTACAGAATATGTCTTTAATAAAAAATTCAA-TATTATTTCTTG---GATTTTAATATCAAT---TCATTATTTATATTTTTAATA 12863
91 P L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F I 120
12864 ATATTACAA---CCAAAATTTATTTTTATGGAAACC---GAAATTTTATTTAATCTACCATATAGTATAGTAACTATAACTCAAATATAT 12947
121 L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I G 150
12948 ACTTCTCAAGAAAA-AATTATGTATTTGTTTCATATTTCGAATACTGTTTGTTTATTATTAATATGGATATAAATATGAAAGAAAATTTA 13036
151 S A L F I G Y K E K G I L - L C L F I M P F Y L P I L I F T 179
13037 ACTTATATCATAAGACAAATAGACTTTGAATATTTAATAACTGATTATATTAAACTTAAAGATTTAAAAATTTATGTATATATGTTTATA 13126
180 T N I L Q T I L I H E N I L N E V Y L F S F F F L C F L L V 209
13127 GAAAATTATGTCTATTTAGAACTTTGTATCAATATTTTTATAACAAAA 13174
210 - S P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12873
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.02
12874 CAAAATTTATTTTTATGGAAACCGAAATTTTATTTAATCTACCATATAGT-AT-AGTAAC---TATAACTCAAATATATACTTCTCAAGA 12958
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
12959 AAAAATTATGTATTTGTTTCATAT---TTCGAATACTGTTTGTTTATTATT---AATATGGATATAAATATGAAAGAAAATTTAACTTAT 13042
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
13043 ATCATAAGACAAATAGACTTTGAA---TATTTAATAACTGATTATATTAAACTTAAAGATTTAAAAATTTATGTATATATGTTTATAGAA 13129
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
13130 AAT---TATGTCTATTTAGAACTT---TGT---ATCAA-TATTTTTATAACAAAATA---ATAACAGAA---GTTGTACAAGAATTTTCT 13203
91 P L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F I 120
13204 TTATTGCATCAGTTATATTATTTTATGCGAAATAGTATTGTAATATTAAGTGTTATCCAAACTGTAGTATCTTTTGTACAAAAGATTAAT 13293
121 L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I G 150
13294 TTTATCCTTAAAATTAATCAAGTAGAA---GGTATTTATCTTACTGTAAAAATTATT---TATGAAAAAGGTTTGCTTAATAAGATGACT 13377
151 S A L F I G Y K E K G I L L C L F I M P F Y L P I L I F T T 180
13378 GAAACACAATTAAAAACATTATTA---GATATCATTTGGAAAAAAATAAC-AAGGAAATGATCTTATATCAAAAAATAAAAATCATATGT 13463
181 N I L Q T I L I H E N I L N E V Y L F S F F F L C F L L V S 210
13464 ATCTTTATAAAAAAAAATTACTATAAGATAAACATAATCAAT 13505
211 P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17432
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 5 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.12
17433 GGTTTCTGTAGGTACTTTAGATATTACTACAAATTTATAATGATCCTTTATCCATTACTTTGGTACATTAAT---TC-CTTTATTACTTT 17518
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
17519 ATTAATCTAATTTATTCTTATGATATTTACATGAAGATCCTAATTAGTTAAATTTTTTGCTTA---TTTAGTTTTTTCTCTTTTTCTATG 17605
31 I I L I F - F P I S F K Y N E T L I Q N T S I S I I T I S C 59
17606 TTTGTCTTGTTTTTGCTGGTAATTACTTATTATGTTTTTAGGATGGGAAGCTGTGGATTAGCTTCTTATTTCTTATTAATTTCTGGATAC 17695
60 F L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q - Y 88
17696 AAGAAATCAAGCAATCAGTCTGCTATTAAAGCAATTATTTTTAATCGTGAGGTGATGCAGCTTTC-ATAAGTGCTATGGGTCTTATTTAT 17784
89 K S P L Y K Y I V I K C F I K W F L V S I C L S - L G T I I 117
17785 TATTTTTTAATTCTTTGATTTAGAAGATTTAGAATTACTTGTTCACAATATGAACATACTACTTTTAGCTTTTTTCATATTCTTTTCAAC 17874
118 G F I L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G 147
17875 AATTGAATGATAGCTCTTTTCCTA---TTTTTGCTGCTGTGCTAAATCAGCACAATCTTTTTACATCCT---TGGTTACCTGATGCTATG 17958
148 S I G S A L F I G Y K E K G I L L C L F I M P F Y L P I L I 177
17959 AAGGACCTACACCAGTTTCAGCATTATTACATTCT-GCTACATGGTAACAGCAGGTGTTTCTT---AATATTAAGAT-CTCTGTTATTTT 18043
178 F T T N I L Q T I L I H E N I L N E V Y L F S F F F L C F L 207
18044 CTCACATGCTCCTTATATTT-CATTATTGTAGCTTGTATTGGCCTAATACA 18093
208 L V S P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 30920
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 7 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.08
30921 ATGATCTGCTATGTTTTCTAGTATAATTTTGATTATATTGTATTAAATTTTCAAATTTCTATATTTTTTTATGATTATTTCTTGTTAGTT 31010
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
31011 TATATGCTTAA-TTTCTAATAATCGCATTAAAACTA---CTTTGAATATCCAATAATAGTTTTATTAGCAGTATTGGGAATGGTAATATT 31096
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
31097 GTTGCGTTCTACTGATTTATAAATTATTTGGTTTTTAACAATGAGTTACAATCTTTTGTTTTTATACTTTGGCTGCTTATGAACAAATA- 31185
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
31186 GATCATACTTACAAACGAAGCAGGTTTAAAATATTTCTATT-TGGATCTATAGCAGTTCTTTATATTTATTTGGTACCTCT---AACTTT 31271
91 P - L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F 119
31272 ATTTATATACAGGATCT-GTTAATTTTGATAGTATAGTGCTCTTTCTTATTTT-CAATTGAAAATAATATATATTTCATAT---AGTTTA 31356
120 I L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I 149
31357 GTTTTAATTCTTATAGTTTATTTTTTAAA-CTCGGTATAGCACTTTT-CATTTTTGGCTTCCTTTAGTTATACCTATTCTTCTTCTATGT 31444
150 G S A L F I G Y K E K G I L L C L F I M P F Y L P I L I F T 179
31445 TACCTATTTATTTATTTATTACCAAAAATCCATTATTTTATTTATTATATAAATTACATCTATAAGTTGAGTTATATTATTTACTACCGA 31534
180 T N I L Q T I - L I H E N I L N E V Y L F S F F F L C F L L 208
31535 TATTATTATCTTATTTATAGGTACTGTCTTTGCTTTAAAGCAACTAAT 31582
209 V S P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 30920
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 7 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.08
30921 ATGATCTGCTATGTTTTCTAGTATAATTTTGATTATATTGTATTAAATTTTCAAATTTCTATATTTTTTTATGATTATTTCTTGTTAGTT 31010
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
31011 TATATGCTTAA-TTTCTAATAATCGCATTAAAACTA---CTTTGAATATCCAATAATAGTTTTATTAGCAGTATTGGGAATGGTAATATT 31096
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
31097 GTTGCGTTCTACTGATTTATAAATTATTTGGTTTTTAACAATGAGTTACAATCTTTTGTTTTTATACTTTGGCTGCTTATGAACAAATA- 31185
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
31186 GATCATACTTACAAACGAAGCAGGTTTAAAATATTTCTATT-TGGATCTATAGCAGTTCTTTATATTTATTTGGTACCTCT---AACTTT 31271
91 P - L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F 119
31272 ATTTATATACAGGATCT-GTTAATTTTGATAGTATAGTGCTCTTTCTTATTTT-CAATTGAAAATAATATATATTTCATAT---AGTTTA 31356
120 I L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I 149
31357 GTTTTAATTCTTATAGTTTATTTTTTAAA-CTCGGTATAGCACTTTT-CATTTTTGGCTTCCTTTAGTTATACCTATTCTTCTTCTATGT 31444
150 G S A L F I G Y K E K G I L L C L F I M P F Y L P I L I F T 179
31445 TACCTATTTATTTATTTATTACCAAAAATCCATTATTTTATTTATTATATAAATTACATCTATAAGTTGAGTTATATTATTTACTACCGA 31534
180 T N I L Q T I - L I H E N I L N E V Y L F S F F F L C F L L 208
31535 TATTATTATCTTATTTATAGGTACTGTCTTTGCTTTAAAGCAACTAAT 31582
209 V S P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 33943
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 10 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.02
33944 TTGCTCTTGTATCTGTGGATTCAATT-TAT---TTTGTATTACATGCAAGGAATCTAGTTGATACCTTTTCGGTTGTGATAAGCTTTTTT 34029
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
34030 TATTCGGAGAGGTTCTTTGACTTTGC-TTCTTGCTAAGC---GGATTTATATTTAATGTAGTAGGGGATGTGTTTATATTATTATT-AGT 34114
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
34115 CATGTTACTATATGGGGTTTTAAAAGGATTGCGATTAACAT-GTTGATAATGTCCATTCTAGAGATTATACTTTAGAGAAGGAAAAAGGT 34203
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
34204 AAACACTTC---TTTGTGGATTACTCCCACTTCATCCGTTTTAACTTAGTATG-GTCTT-ACATCCTATCGCAGTTGCCACGGTTTTATA 34288
91 P L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F I 120
34289 CTA---CAATGC---TTTTATATACAT---CCTTAC---CATCTCTTTGATATACTTAT-ATGCTTCTTTATCTC---GCGAGGATA--- 34359
121 L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I G 150
34360 TA-AGAGTCTTTTTAAGCATATCACTTTCTAAGATTACCTGTAAATTGTATATTGCCCCATATAGGTCATCGTCAAATATACATAATTCG 34448
151 S A L F I G Y K E K G I L L C L F I M P F Y L P I L I F T T 180
34449 ---GTATTC---TGCATACTTGTGAATAATGCTGTAACATCTGAAAGTATAAAGCC-TTATCTATCTTTAAAGACTCCCTCCTATTAAAG 34531
181 N I L Q T I L I H E N I L N E - V Y L F S F F F L C F L L - 208
34532 AAGTCGCAGATAAAACATCCACACTC-TTTATTAGTTGGTTGGCATAT 34578
209 V S P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 6558
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
6559 TCTGTTTCAATAATAACTGCAGGAGATTTTGTTATTTTTATCAAGTTACGTTTTTTTAATTCATCAATAAGTTGCTGCTTGGTTAATTCT 6648
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
6649 TCCATACTTGTTTTTTCAGTAATATTAGTAGTATATATA---ACA---CCGTCTGGATTTTTTAATTCAGGAATTGGTTTTACG---CTT 6729
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
6730 GAAGAAGTATTATCTATTTTAGAGAAATCATTTAAAACAGTAGTAGACGG-GGTATGTTGGGTATCATTAGTAATACCAAAATGCAATGG 6818
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
6819 AGGTATTGGAAATGTAGGATCACTAAGATTTATATTTTGATTTTCGTGACTTA-TTGTGTTATTTATACTCTCAGGCAATGGTATTTGG- 6906
91 P L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F I 120
6907 TTAGAGGCAATTGATAATGAATCTTTTTTAATAAAGGATTTAAATGTTGTTTTACAGGTTTTAGTTATACTTGTAAGA---GGTGAAAAA 6993
121 L L N L P - Y Y Y Y T P L I S I L L M I T L L L I L I G S I 149
6994 GGTTCTGACACTTTTTGTGAGTTTTGA---AAAGGATTTTTCATATCAATATTATTTACCTCCTTAAACTTTTTACTACTCAATGGAGAT 7080
150 G S A L F I G Y K E K G I L L C L F I M P F Y L P I L I F T 179
7081 CGAATACCTTGTAATTCTCTATTGCTTAAACCTCTATGTCTAGTTTGTATTTTTGTA---TCAGTAATATATTTATT-ATGATGCTGTTT 7166
180 T N I L Q T I L I H E N I L N E V Y L F S F F F L C F L L V 209
7167 ACA---TTGTTGACGCAATTTACGACA---TTGTGGATTCGAAAT 7205
210 S P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 25733
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 5 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.04
25734 CTCATTTTCATTATGTTTATC---TATGGGAGCAGT---TTTGCTGCTTTTGCTGCTTTT---TATATTGGTTTTCTATTATTAAATCTT 25814
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
25815 TACTACTTATGAACCACAGAATGGGAATTTGTTTATAATCCTTTGAATTACGAAAAAAAATTCCTTAT-GTCGTACTGATTTTAGT-TAT 25902
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
25903 TTGAAACAGCTGGTATTTACATTTCATTACTACTTCATTGGTGTTAATCTTACTTCTTCCCTATG-CATTATTAGGTCTTGCAGGAATGC 25991
61 L T T L - F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K 89
25992 ACGCCG---TATTCCAGATTATCCTGA---TGCTATTTACATTTTAATTTAATA---GTAGTTATGGTTCTT---TTGTTACTTAGTTTC 26069
90 S P L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F 119
26070 ---CACTATCATATTCTTTATATTTGGTGTGTTTTTAATTATAATTTATTTATAATGGTTTTCCTTCTATATTTTATATATTAAACCTTT 26156
120 I L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I 149
26157 AATCAAAATTACTTTCTTCGTATTAAACAAATATTCAAGGAAATAATGAATGTCTTAATAGTATTCTAAAGAATTAACATCTTAATTCTT 26246
150 G S A L F I G Y K E K G I L L C L F I M P F - Y L P I L I F 178
26247 CATGTTAAACGCTTGTCTAAATTAAGCGTAAATAACTGGAGAATTGC-TTAAATTACCTAATAACATATCATTTCAAATATAATAATTTA 26335
179 T T N I L Q T I L I H E N I L N E V Y L F S F F F L C F L L 208
26336 ATACAACATCTTATTTT----TATAAAATTAAATTAAGAACGTTATCA 26379
209 V S P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 36950
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 6 ||| 2 Nt shifts: 0
Score: 48 Length-adjusted: 0.21
36951 TTTATACGCTTTCTCTTT---TCTTATTC-CTAATGCTTCTTTTTATTTCTACCATTAATATTATAGTTGCTGTGATATCAATTATATTA 37036
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
37037 GCTCTTTTACAGTTTACGTCAAAATGATTTAAAAAGGATTATTGCTACTCATCTATTGCACATATGAATTTTTTA---GTGGGCTATTTT 37123
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
37124 TGTAAAAGATTTATTAG-TTTAACAGGTTCTTTATTATTGCAAATGCTCATGGGTTTCTTCTTCCGCTTTATTT-TTAGCAATGGAATG- 37210
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
37211 ---TTATATGATGATATAAAT---CACGT-AATATTTCT---ATTATCGTG---GTTTGTTACTGTTATGCCAATATTTTG---TTTCTT 37284
91 P L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F I 120
37285 CTTTTTTATTTTTTCTTTAGCGAATTTAGG---GTTTCTTCTACTGTTAATTTTATTCT-GAAATGTTAATATTTTTTGGCTTATTTCAA 37370
121 L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I G 150
37371 ACAGTCCTTCTATAGCTATTTAACTTTAACAGGTATTTCTTATCTGCAGTTATTCTTTTGTTTTACTTACTCGCATGCTTTTGGTCCTGC 37460
151 S A L F I G Y K E K G I L L C L F I M P F Y L P I L I F T T 180
37461 AAGCCATTTCTTTCTGTTTATATGATTTGACTCGCCGAGAATTTTATATTTTATTACTTTAGCTTTTCTTATATT---TTCCTAGGATTA 37547
181 N I L Q T I L I H E N I L N E V - Y L F S F F F L C F L L V 209
37548 TTTCCTATTATTTGACTCATA---TTGGACCTTTGGTTTGGTTAC 37589
210 S P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 36961
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 8 ||| 2 Nt shifts: 0
Score: 32 Length-adjusted: 0.14
36962 TTTATACGCTTTCTCTTT---TCTTATTC-CTAATGCTTCTTTTTATTTCTACCATTAATATTATAGTTGCTGTGATATCAATTATATTA 37047
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
37048 GCTCTTTTACAGTTTACGTCAAAATGATTTAAAAAGGATTATTGCTACTCATCTATTGCACATATGAATTTTTTA---GTGGGCTATTTT 37134
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
37135 TGTAAAAGATTTATTAG-TTTAACAGGTTCTTTATTATTGCAAATGCTCATGGGTTTCTTCTTCCGCTTTATTT-TTAGCAATGGAATG- 37221
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
37222 ---TTATATGATGATATAAAT---CACGT-AATATTTCT---ATTATCGTG---GTTTGTTACTGTTATGCCAATATTTTG---TTTCTT 37295
91 P L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F I 120
37296 CTTTTTTATTTTTTCTTTAGCGAATTTAGG---GTTTCTTCTACTGTTAATTTTATTCT-GAAATGTTAATATTTTTTGGCTTATTTCAA 37381
121 L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I G 150
37382 ACAGTCCTTCTATAGCTATTTAACTTTAACAGGTATTTCTTATCTGCAGTTATTCTTTTGTTTTACTTA---CTCGCATGCTTTTGGTCC 37468
151 S A L F I G Y K E K G I L L C L F I M P F Y L P I L I F T T 180
37469 TGCAAG---CCATTTCTTTCTGTTTATATGATTTGACTCGCCGAGAATTTTATATTT---TATTACTTTAGCTT-TTCTTATATTTTCCT 37551
181 N I L Q T I L I H E N I L N E V Y L F S F F F L C F L L V S 210
37552 AGGATTATTTCCTATTATTT-GACTCATATTGGACCTTT--- 37589
211 P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 56204
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.05
56205 CTAGTAATTTATTAGAAAACCATTTATTTTAAAATAATATTTAATAAAAAACTAAATAATGT-TATTACAAGATAATAACCTTTTCTTTA 56293
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
56294 TTCGAATATGCTTTTAAGTTTATATTTTTCTCTTATTATTATATATACAGTAA-CACCAAATGCTATCATGCATTATTAGCTTTAATTTT 56382
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
56383 ATTATTCATAACTTCTC-ATTTCTATTATTTTTAACGATTCAGCTTTCTTAGGATTGCTTATATTTTAGTTTATATGGTGCTATTTGTGT 56471
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
56472 ACTATTTTTTATATAATATTACTTCACATTTACGCTCATACACGCTTATGCAACGTCAAAATTCCATTTTATTATTATTTTAATTTTTAT 56561
91 P L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F I 120
56562 ATTTTTAATATAATGACTTTTTTATTTAGCGATACAATCTCGAGATTGTATTTTCTCTAATTATCTTTTAA-ATGATTAGAACTTTT--- 56647
121 L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I G 150
56648 TACCTCATATTC------TTTAAAACACACAACATTATA---TGTTTTTAAGTATTTTTCTTTTATTATTGCATT---ATTCTTATTGTA 56725
151 S A L F I G Y K E K G I L L C L F I M P F Y L P I L I F T T 180
56726 ---TTTTTATCTACTAAATTTGTCGGATATAATAAAACAACTGCTATAATTTTATAATATGAATAATAAACATCATATCATTTAGTAATC 56812
181 N I L Q T I L I H E N I L N E V Y L - F S F F F L C F L L V 209
56813 CATCCCCAT---GGCCTATATTGTTTCAGCAGCTTTATTAGGATT 56854
210 S P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 60034
Protein: lcl|KC353356.1_cdsid_AGH24301.1 [gene=ccmB] [protein=ABC transporter channel subunit] [protein_id=AGH24301.1] [location=complement(46355..47029)] @ 0
DNA length: 1344 Protein length: 224
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.05
60035 ATGATTATTACTTCTTTTTAGGATATGTTT---TACTTGGGGACAAATGTCTTATTGGGCAGCTACGTTATTACTAATTTAGCTCTACTG 60121
1 M I L F L F Q S Y Y Q F L F T I K N K N D Y I N A I L F Y L 30
60122 TTCCTTCTTTGGTCAAAAAATTGTAAATTGGCTTGGAGTGGTTTTTCTGTAGATAATCCTACTTAGCAAATTTTTCTCTTTACATT-ATA 60210
31 I I L I F F P I S F K Y N E T L I Q N T S I S I I T I S C F 60
60211 TTTACC---TTTTGTATTTTAGCTTTTGTTTTATTACATTTAGCCTTATACATCAATCTGGTAGTGGTACATCTTCAGGGTGGGGCCGCT 60297
61 L T T L F I L N R F F I E D Q D E G H L L Q Y N L L Q Y K S 90
60298 CTATTGATGAAATTCTTTTCATCCTTATTATACATTAAAGATTTTTTT---AGTGTAATTTTATTTATAGCCATAATTATATTCTTTGTT 60384
91 P L Y K Y I V I K C F I K W F L V S I C L S L G T I I G F I 120
60385 CTTTTATACCTAATAGCTAGGTCATCCAGATAATTATATTCCTGCAATCCTGATCAAACTCTGAGC---ATATTGTTCAGAATGGTATTT 60471
121 L L N L P Y Y Y Y T P L I S I L L M I T L L L I L I G S I G 150
60472 TCTACC---TTTTTATGCATCCTT---CGATCTATTCTAATAAATTATTAGGTGTTATTGCCCTTGTTGCTAGTATCATTTCTTATTAAT 60555
151 S A L F I G Y K E K G I L L C L - F I M P F Y L P I L I F T 179
60556 ATTACCTTTTATAGATGTCCTTTAACCCGTAG-TCTGTTTATAAGCATTTATTGCTAAACTTAATATTTTATTTATGCTGATTGTTTTGT 60644
180 T N I L Q T I L I H E N I L N E V Y L F S F F F L C F L L V 209
60645 TTTAGGTTATATGGTCAAAGTCCTCTTGAAGAACGTTCTTATTTT 60689
210 S P I I C T Y C L K L W S A E 224
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 291
Protein: lcl|KC353356.1_cdsid_AGH24302.1 [gene=ccmA] [protein=ABC transporter ATP-binding subunit] [protein_id=AGH24302.1] [location=complement(47050..47688)] @ 0
DNA length: 1272 Protein length: 212
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.01
292 TATATAATTATTATTTTTTTTAGTATTATTATATACATATGTTATAAATATCCTCGTACCAATATATTAATTAAGGAAGATTTATTCGAA 381
1 M H L D I I Q S I Q I H N L T G I R S N K V I F K N I N F T 30
382 TATGCTTTAAAAACAACTAAAGAAAAAATGATAAATATATGTATCATAACGTTATATATATTTACTTTTGTTATAGGTATATTTTATCTT 471
31 L C K G N Y L V I Q G P N G S G K T T L L K M I S G L I Q K 60
472 AGATATATAAATATAACAAAAAAAGTAGACTTAAAAATTTATTATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAAGAAGAAATT 561
61 S K G D I L I N - E L K I S E N S L K N K L F Y M D S T P S 89
562 ATTTTAAATGTGGTAATAATAATAACTTTTATAATAATTTATATTTTTATAATATATAAATTTACTCAATATTTTAAATTACAAGTAATT 651
90 F K E D L T L I D F - L I Y W S T L Y N G L R N I S Y E Y I 118
652 AAAAGACATCTTTACTTAATAGGAATACCA---TTAAATAATAATTGGTATTCAACCGTTCATCGAAAGTATTTATGGCCTTTAGCAAAT 738
119 K I S L F K M G L S N L Q N K T I S T L S L G Q K K R L L I 148
739 TCTTTTCTTAAAATAAGTATAAAACATAAAATTGAGTTATTGTATAAAAAATATTATTTTGATAAAAAGCCTCATAAACCAAGACCTGAT 828
149 S L L L L T N K Q L W I L D E P T I G L D K Y W T K K L S Y 178
829 AATTTTTTTTCTTTATCTGAAGAGGCAAAAATTTTATTTTTTAAAAATAATCCTACATTACCTGAATTACTTTTTCATAAATACAAGAAA 918
179 I F L K H C K R G G I I I M S T H T E I - E I Q N N T Y L R 207
919 ATGTCTATTTTCATA 933
208 L N F K I 212
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16060
Protein: lcl|KC353356.1_cdsid_AGH24302.1 [gene=ccmA] [protein=ABC transporter ATP-binding subunit] [protein_id=AGH24302.1] [location=complement(47050..47688)] @ 0
DNA length: 1272 Protein length: 212
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.01
16061 CTTTACGGAATGACAATAGGAGGTAGTCGT---AAATCTATTTCAAATGCGCTCATTGAAAAAATAATTGAAAAAGGA---AAATTTGAT 16144
1 M H L D I I Q S I Q I H N L T G I R S N K V I F K N I N F T 30
16145 ATA---AACCTTTCTTATATTCACATATTTTCTGATATATTATCTAAATATTATAAATATTTTTATAAAACTAATTATTTACCTTATTGT 16231
31 L C K G N Y L V I Q G P N G S G K T T L L K M I S G L I Q K 60
16232 GATACTTATTTAACATTACGAGAATTTCTAAAGAAAATGGAAGGTCCTTTAACAATGTCAACAGAATTTTTAACATGGTCATATAATCCA 16321
61 S K G D I L I N E L K I S E N S L K N K L F Y M D S T P S F 90
16322 AGAAAAATGAAAATATTACGTATAAATGTTGTAAAATATTCAAAAATAACAAATGACCTTAAATCTTTGAAACGACGTATGATTAACGTA 16411
91 K E D L T L I D F L I Y W S T L Y N G L R N I S Y E Y I K I 120
16412 GCATATTTTACAGGAAAAATTGATCAAACTAAAATATATAACTCAGTTTCTGCTTTTATTATACATACAGAGGAAGCCCGATTAATGATG 16501
121 S L F K M G L S N L Q - N K T I S T L S L G Q K K R L L I S 149
16502 TATTTTATATATTCCTCACAACAACTTAATAAAGCTTTACACGAAAATTTAGGTATATCTTATTATTATACTCAAAATTATGATTGTTTT 16591
150 L L L L T N K Q L W I L D E P T I G L D K Y W T K K L S Y I 179
16592 GGAATTAATTATAGTTTTATTGTCTTTTTGAAAATTCAGTTAAAATTAAATTATAAAACTTGTTATACTCATGAATTATTTCCTTCTCTT 16681
180 F L K H C K R G G I - I I M S T H T E I E I Q N N T Y L R L 208
16682 ---TTTAAAATT 16690
209 N F K I 212
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61651
Protein: lcl|KC353356.1_cdsid_AGH24302.1 [gene=ccmA] [protein=ABC transporter ATP-binding subunit] [protein_id=AGH24302.1] [location=complement(47050..47688)] @ 0
DNA length: 1272 Protein length: 212
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
61652 ATGAAAACCGATGAAAAAAAAAACCAAAAAATAAAAAACACAAAAAAAATATTTTTAAATAAAAAATTTTTTCCAATATTATTTTTTATA 61741
1 M H L D I I Q S I Q I H N L T G I R S N K V I F K N I N F T 30
61742 ATAATATTAAAAATTTTATTAATACGTGAAATTTTTTATTTTCATGAATTAATTACATATTTAAAAATAATACCT------ATAAAATTT 61825
31 L C K G N Y L V I Q G P N G S G K T T L L K M I S G L I Q K 60
61826 GATAAAATTTCTTTAATTTTTGATAATTTACAA---AATATTAAT---CTTATTAAT---------TAT---GATTTTAATAAAAAA--- 61894
61 S K G D I L I N E L K I S E N S L K N K L F Y M D S T P S F 90
61895 AACGAAAATATGATTTTATATCAATATGCTATAATTTTCCCTATGATTTATAAGGGAAATACAAAAAATTTTATTTGTAAAAAAATTACC 61984
91 K E D L T L I D F L I Y W S T L Y N G - L R N I S Y E Y I K 119
61985 ATAAAAAATTTTATCCGTTTTTATCCAGGTCATGTGAATAAAATTATCAATATTATTAATACTTCTCTAAAAAAA---GTATCACCACAA 62071
120 I S L F K M G L S N L Q N K T I S T L S L G Q K K R L L I S 149
62072 GCACTTATTGAACAAAATCGAATAGAAGCTAATAAAATGATTATTTATGCATTCTGCGAACATTTTAAAAATGATAACTTATCTGATTTA 62161
150 L L L L T N K Q L W I L D E P T I G L D K Y W T K K L S Y I 179
62162 TTAGATGATCAC---AAAATTATTAATCGTATGCATGATTTTATTCATAAACAACCAACTCTTAGTTCAAGAGCATTT---CAATTAGCA 62245
180 F L K H C K R G G I I I M S T H T E I E I Q N N T Y L R L N 209
62246 TTGGAAGTT 62254
210 F K I 212
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33148
Protein: lcl|KC353356.1_cdsid_AGH24302.1 [gene=ccmA] [protein=ABC transporter ATP-binding subunit] [protein_id=AGH24302.1] [location=complement(47050..47688)] @ 0
DNA length: 1272 Protein length: 212
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.07
33149 CAACATTGTACTTTAATCGTCTA-ATTCTCTTAATAGATTTAGAGCCTATCTTAATGAATGGTTTTCGTTTATCAAAACTTAATATACTG 33237
1 M H L D I I Q S I Q I H N L T G I R S N K V I F K N I N F T 30
33238 ACTCCCATAGCAGAGTATTATAATACTATGTTTTCCAATGCAGTATTAAAGGAAACAGAAAATAAACTCATCAATAATTTAAAAGACGAC 33327
31 L C K G N Y L V I Q G P N G S G K T T L L K M I S G L I Q K 60
33328 TCTTTAATCACA---TTGTATAATAAATATTTGATA------CATTCCCCGGATGAGCGTGCAGAGTATGTCGACATCTATTTACCGTTG 33408
61 S K G D I L I N E L K I S E N S L K N K L F Y M D S T P S F 90
33409 AAG---GACTTCAAACAT---AACATTAAAACCTATTTTAATGAAATA---AATCATTTATATCATACATCATATCGCAAATTCAAATTA 33489
91 K E D L T L I D F L I Y W S T L Y N G L R N I S Y E Y I K I 120
33490 GCACCG---GATTTATACGTTTCTGCAATAAACAAT------ATAAGTCCAATG---TTTTATCAACAGTGCTTATCAACCCTTAAACAA 33567
121 S L F K M G L S N L Q N K T I S T L S L G Q K K R L L I S L 150
33568 ACCATGATAGATCATTTACGTTTT---ACGCAAAATAAACCTACGGATCTAACTTATTATTTTTATCTTATCAAACTAATGTTT---TTT 33651
151 L L L T N K Q L W I L D E P T I G L D K Y W T K K L S Y I F 180
33652 CCAGAAGAATCAGATAGTTATAAAGTACCGTTATTTACCTCTGAACAAAAGAAGCAAGTAGAAGGTTATCTTTCTGAGCATATAAACTTA 33741
181 L K H C K R G G I I I M S T H T E I E I Q N N T Y L R L N F 210
33742 TTTGTA 33747
211 K I 212
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 432
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.44
433 TTATATATATTTACTTTTGTTATAGGTATATTTTATCTTAGATATATAAATATAAC-AAAAAAAGTAGACTTAAAAATTTATTATATAAT 521
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
522 GCTAAAAAATCTTTTTACTGAATTTACAAAAGAAGAAATTATTTTAAATGTGGTAATAATAATAACTTTTATAATAATTTATATTTTTAT 611
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
612 AATATA 617
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 675
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
676 ATACCATTAAATAATAATTGGTATTCAACCGTTCATCGAAAGTATTTATGGCCTTTAGCAAATTCTTTTCTTAAAATAAGTATAAAACAT 765
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
766 AAAATTGAGTTATTGTATAAAAAATATTATTTTGATAAAAAGCCTCATAAACCAAGACCTGATAATTTTTTTTCTTTATCTGAAGAGGCA 855
31 - Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
856 AAAATTTTA 864
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 834
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
835 TTTTCTTTA---TCTGAAGAGGCAAAAATTTTATTTTTTAAA---AATAATCCTACATTACCTGAATTACTTTTTCATAAATACAAGAAA 918
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
919 ATGTCTATTTTCATAGAT---AATATTTTAACAAAAGGTCATTATTTTATATTAATTATTAGTATTCTATATGATGTTATAAATAATGAT 1005
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
1006 TTTATT 1011
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1385
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.18
1386 TTATGGTCATATTATATGCATGTAGAAGTTATCAAAGATAATGATAATAATTTATTAAAAACATTGCCTTCAATAAAGATTATTCATAAT 1475
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
1476 TATTTTCTGTATAAAAGT---AGTTATTTATATGAAGCTGGTTCAATATGTAAATCTTTATATAAAATAATGCCGACAACTAAATATTCG 1562
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
1563 GTAGTT 1568
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2051
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.39
2052 ATATCTGTAACAATTATACGAAATACAGTCCATGAATATTTTATAAAAAGTAATTTAAATAGTAATCTTACACCGTCTGATTTGCAAAAC 2141
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
2142 ---ACT---AATCATTTAATTAATTTATTACTTAAGGAACTAATTGTCAATAGTTTTTTTGCCGCTGACAACGAAAGTTTTATAATGAAA 2225
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
2226 CAAATT 2231
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2051
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.39
2052 ATATCTGTAACAATTATACGAAATACAGTCCATGAATATTTTATAAAAAGTAATTTAAATAGTAATCTTACACCGTCTGATTTGCAAAAC 2141
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
2142 ---ACT---AATCATTTAATTAATTTATTACTTAAGGAACTAATTGTCAATAGTTTTTTTGCCGCTGACAACGAAAGTTTTATAATGAAA 2225
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
2226 CAAATT 2231
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2413
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
2414 AATTTTATCCGTTTTTATCCTGGCAATTTAGGGAAAACACAACCAAAATCTATTAAAGAAATGCCTGAGAGTAAAAC-ACCTCAAGAAAT 2502
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
2503 TACAAAATATTTTCCATCAGGTACAACATTACAAGATCTTGAAGAAGTTGCACAAGATGTAATGTATCCCAAAGAAATGTCTAGTAT--- 2589
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
2590 TCCTAC 2595
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2432
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.31
2433 CTGGCAATTTAGGGAAAACACAACCAAAATCTATTAAAGAAATGCCTGAGAGTAAAACACCTCAAG---AAATTACAAAATATTTTCCAT 2519
1 M A V - P K K K S S V S R R K I R N V H L K E Q M K N S I Q 29
2520 CAGGTACAACATTACAAGATCTTGAAGAAGTTGCACAAGATGTAATGTATCCCAAAGAAATGTCTAGTATTCCTACTGAAAAAAGTGAAG 2609
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
2610 AACCAATTA 2618
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2725
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.32
2726 AGATTAGTTTATAACACCAGTAGTAAAGTATGGAATTACCTAAAAAAAAATGTTGAATTTAAATTCCATAAACCTGAGTCT---GATAAT 2812
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
2813 TATACAGTGCCTATTACAGCCGTTTAT---GATACAAAACAAGGA---TCATCCGATATT---CAATATAATTTAGAAAAAATAATTAAA 2893
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
2894 GATTTG 2899
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2896
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.18
2897 TTGAAAATAGCTATACAGGAAAAATCTTTGAATAAAGAACAAGTAAAAAGCATT---ATTGATGATATTCGTAAAAATTATGTTACTAAA 2983
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
2984 GGGGTTAGTATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAG---TCTTATGATTTTCAATATGAACCTTTAAAACAAATTTGTAAA 3070
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
3071 ---ATT 3073
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3109
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.39
3110 ATTGTTATAGATTCTAAATCATCTTATGAAGAAAAATTGAAAAATTTAGAAGAAAAAATGTCAATAGCTCTTAAAAAT---ATAAATAAT 3196
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
3197 TTT---CTTGAAAAAAATAAAGATTATACTAAAGAATTTCTTGAAGCAAAAGAATTACAAGAATGGTAT---GATTATTTTCAGAATAGA 3280
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
3281 GGAGCA 3286
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3310
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
3311 AAAGAAGTTTATGATAAATTATTAGAAATAAAAAATAAATATTTACCTAGCGAAAAA---GATTTTCAAGAAAAAAATAGTAGTTATTTG 3397
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
3398 ACACCTCTGAAAAAAAATAGTGCTTTACCTATTAATTTACAAAATGAAAAATCAGCTAAATGTTACTTGCCAAAAGATTATGTTATGGAA 3487
31 Y S I C K N C N Y - I K K K H H I C S N C G Y Y N D S L I Y 59
3488 ATAACAAAT 3496
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3490
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.26
3491 ACAAATATAGAACGTGCTCTTGAAATTTTAAATAAATCACAAACATTATCTATTAATGATCTTAAATTGTTATCCATTAATTCTTCGGCA 3580
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
3581 GTTACTATA---GATACAGAAGGTGTTATTAAAATATCACAAGAGGCGTATCAGTCTTTTACTAAATATAAAGATAGCTTAGGATTTAAA 3667
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
3668 TATTTA 3673
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3628
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.18
3629 CAGTCTTTTACTAAATATAAAGATAGCTTAGGATTTAAATATTTATTAGAATATCCAAAAACAGAAGAAATATTATTACGTATAAAAGAA 3718
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
3719 AGGAATTTTTTTATTGCTAAAAATATGGATTCTAATCCTAATGGAATTATTGCTTTAGCTCACCTATCACATAATACATTAATTATTCCA 3808
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
3809 AACCAA 3814
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3796
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
3797 TTAATTATTCCAAACCAAACCGAGAAAAATTTATATGTTAGGGTAGGGCTTGTTACTAGTACTAAAAGTGATTCTAATATTAAAATTGAT 3886
1 M A V P K K K S S V S R R K I R N V - H L K E Q M K N S I Q 29
3887 AGTTATCAAGTTACTAATGAGGATTCTAATAAACAAAATAAAGATCAAATGTT-TCGTATTTTTCCTACTTTTTTAATTGTAG-ATGAGA 3974
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
3975 AAATTGAGC 3983
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4088
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
4089 ATATATGGTCCGAAAATTATTACCAATATCCTTTTAATGTGGATCAAGAATTTTTACGTCAACTTTCTATTATTTTTTATAGTAATAAAT 4178
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
4179 TAC---------AAGAACTTCAACAGGATTATAAAGAACTACAAGATA------AATTATATTCACTTCTTATTAAAA---GTCACGAAG 4250
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
4251 ACTATA 4256
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4228
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
4229 CTTCTTATT---AAAAGTCACGAAGACTATAATAAGGAAATAGATCGCCTTAATGAATTAAAAACAAATTATTTGAAAGAT---AGAAAA 4312
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
4313 TATAAACAATATTTTAAT---TCATTAACAGATGAAGAACAAAAATTAGTTTCTCATATAAAAATTTTTCAAGATAAGATTAAAGATGAT 4399
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
4400 AATATA 4405
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4408
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 31 Length-adjusted: 0.50
4409 AATGAAAAAAAACAAAAGAAAGAACTTATTAATCAACTTTTGGAAAAAAATAAAAAAGGAAAAGATAAAGAAGAAGGAACAGAAATTTTA 4498
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
4499 ACTGCAAAACAAAAAAAGGAGAAATATCTAAAGGATAAACAAAATATA---AATAATATCGATGAAAAGAATAATTGATTATTTTTTAAT 4585
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
4586 AATATA 4591
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4634
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
4635 ATAATTTGGAGTAGATTTATTCGATCTCGTACTATTAGAGAACTACCTGATTCTTTATTAACAGAA---TATCGCTTTTGGATTTTAATT 4721
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
4722 TAT---ATTTGT------TGCATATATATATATAGTATTAAAAATATTCTGAAGGCTTCAGGAGAT---AAC---TATCTTAATTTAAAA 4796
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
4797 GATATT 4802
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4757
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
4758 ATTCTGAAGGCTTCAGGAGATAACTATCTTAATTTAAAAGATATTATAGAGATA---TTGTATGCACCTTTGAAA---ACTATA---GAT 4838
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
4839 CATGCTATTAAATATAAT---AAATATATTAAACCTTATTATTACAAATTTGTGAGT---AAATTTTATAACTTTACTGAAACA---AAA 4919
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
4920 AATATA 4925
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5214
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.23
5215 ATGATGAAGAAAAAACAATACGGGAATATATA-GAAATTAAATTTAATAATATT---ATAGATTATTTACTTGATGAAGTTGATTATGAG 5300
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
5301 TATGAATCAACTCCTTATTGTAAAAGT---GAAGTCTATAATGAATATTGTTTAAAT---AAATATAAAAATAAAAAAGCTCTTTATACA 5384
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
5385 AGTGAA 5390
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5214
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.23
5215 ATGATGAAGAAAAAACAATACGGGAATATATA-GAAATTAAATTTAATAATATT---ATAGATTATTTACTTGATGAAGTTGATTATGAG 5300
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
5301 TATGAATCAACTCCTTATTGTAAAAGT---GAAGTCTATAATGAATATTGTTTAAAT---AAATATAAAAATAAAAAAGCTCTTTATACA 5384
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
5385 AGTGAA 5390
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5710
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
5711 ATTATGCAAGATTATAAAAAATATTATACAAAAATGGTCAAA---AGAATAATAAAAATAATAATGCAAATGATAATAATAATTTTA--- 5794
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
5795 ATAAATATATGTAAAATTATTACTTTCAAAGTAAAAGCAGATGAAAAAAATCATCAGGAAGTCTTTGAAAATTTTAGAAAAATACTTAAA 5884
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
5885 GAAGGT 5890
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5824
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
5825 GTAAAAGCAGATGAAAAAAATCATCAGGAAGTCTTTGAAAATTTTAGAAAAATA---CTTAAAGAAGGTTTGTTTAATATATTAGAAAAG 5911
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
5912 TTGGATTGTCTTGAAGATTCACAAACAATGAAGGAAATAGTAGAAACATTTATGGAT---AATTTAATGCTGGAAGAATTATATATTAAA 5998
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
5999 TACCTT 6004
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6001
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.29
6002 CTTGCAAAAGATGAAAAAGATTATGAAGGTTTTATGAAAGAAATTCAATCATTA---TTAAAGGATTATCTTCTAAGACTTCAAGAAATG 6088
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
6089 AAAAAATTCAAAGAAAATATGAATAAATTCACCTTACGAAT-CAC---TGCAATATATGTAATTAGTAGTATTTTGTTACCTCATTTACC 6174
31 Y S I C K N C N Y I K K K H H I C S N C G - - Y Y N D S L I 58
6175 TATAACGTCATT 6186
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6465
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.21
6466 ATTCAAATATCTAAGCGTTTTTATCCCACTGATAAAAAAATAGGTCATGCTAAAAAATTGCTTGATCACCGTTCAATGTCTTTTTCTAAA 6555
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
6556 AGAATTTCGAATCCACAATGTCGTAAATTGCGTCAACAATGTAAACAGCATCATAAT---AAATATATTACTGATACAAAAATACAAACT 6642
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
6643 AGACAT 6648
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6663
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 33 Length-adjusted: 0.53
6664 AGAGAATTACAAGGTATTCGATCTCCATTGAGTAGTAAAAAGTTTAAGGAGGTAAAT---AATATTGATATGAAAAATCCTTTTCAAAAC 6750
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
6751 ---TCACAA---AAAGTGTCAGAACCTTTTTCACCTCTTACAAGTATAACTAAAACCTGTAAAACAACATTTAAATCCTTTATTAAAAAA 6834
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
6835 GATTCA 6840
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6813
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
6814 TTTAAATCCTTTATTAAAAAAGATTCATTATCAATTGCCTCT---AACCAAATACCATTGCCTGAGAGTATAAATAACACAATAAGTCAC 6900
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
6901 GAAAAT------CAAAATATAAATCTTAGTGATCCTACATTTCCAATACCTCCATTGCATTTTGGTATTACTAATGATACCCAACATACC 6984
31 Y S I C K N C N Y I K K K H H I C S - N C G Y Y N D S L I Y 59
6985 CCGTCTACT 6993
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7218
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
7219 ATACGTATTGGTAATAAAGATAATGATTTAATATTTACGAAACACGGGCGAGCGTATTTAGAATTACAGCCAAAAAGTCAAATTTTTATA 7308
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I - Q 29
7309 AATCCTTTAGAAATCACCAAAGAAAATATTACTCTTGATGATTTAAATAATTTTTGTATTATTGTACCAAAAAATTATGAGGATGATCTT 7398
30 N - Y S I C K N C N Y I K K K H H I C S N C - G Y Y N D S L 57
7399 ATAAAAGCCTCGCCA 7413
58 I Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7467
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
7468 TTTACAAGCGAAAAAGTTGGTCTAAAAGTAAGTGATGAGCAATTTAAAAAATTTCAAATGAAAAAACAAGGTATAGTATTTACTAAAGAA 7557
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
7558 GAAGAATTA---AAACCTCATAATAATAAATCCCAACAATTACGTTTTTTCAAAAATATACAAGTATTAGATAAAAATGAGGCTTATGTA 7644
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
7645 GCCAAG 7650
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7674
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.39
7675 ATGAGTCTTAATGTAAAAAAGGATTTAGTAGATAATTATAATAACTTAAAAACTAAACATTATGAGAAATATATGCCACAAACAATATCA 7764
1 M A V P K K K S S V - S R R K I R N V H L K E Q M K N S I Q 29
7765 AATGAACAATTATTAAATATGTGCAAAGATGTTGACAAAGAAGCTCAAAAAAAAAAACCTAAACACCCTATGACTCTTGAACAACAGCAA 7854
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
7855 AAAAAAGAA 7863
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7833
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
7834 ATGACTCTTGAACAACAGCAAAAAAAAGAAGTTGAAAAACAG---AAAAATCAATTATTTCAACTACAAAATAAAAAATG-ATAGATATT 7919
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
7920 ATTTCAAGGATAATAAATTTA---ATAATTAAAAATATACATCGTTTATTTCCCGTATTTGGATTTATATTACTTTCATTATATATTTGG 8006
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
8007 GGTAGG 8012
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8117
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 36 Length-adjusted: 0.58
8118 CTTATTAAACCTAAAGTACCACCTCAATTTATACTTAATGTTTTGGTATCTATTATAAATACTGTAAAATCTTTTGACAATTATACGAAA 8207
1 M A V P K - K K S S V S R R K I R N V H L K E Q M K N S I Q 29
8208 CAATTTAATCTTATTTCCAAT---ACCTATATAAAAATATTTACCTATATAGCAAATAAAATTAATTATTATAAT---GTCATTTTATGG 8291
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
8292 GAAAAAATC 8300
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8618
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
8619 ACATTTATTCCTACTTATTTTGATGAGATATATTACGAGCAA---AAAACACCTCATTTTTATTATATTATACGTCCAACAATAGAATGG 8705
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
8706 TAT------------AAT---AATTTATTTAAAGAATATAATGTTACCTGGAAATCTTGTGGAGATATAAAAAACACCATTATCGAAAAG 8780
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
8781 GATCTT 8786
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8786
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
8787 AATTTAATAATTAGATTAAAAAGTATTATAACAACACATGAGATAATTACTAAATGGACAAATGTACAA---CAAAAT---ATAAAAAAT 8870
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
8871 ATTAGAATTATAATATATATAGGATATTTAATATGCTGGGCTTATATATTATACGTAAGTTTATCAAATTTTAAAGATTTTTATATGTTA 8960
31 Y S I C K N C N Y I K K K H H I C - S N C G Y Y N D S L I Y 59
8961 TCATGTATA 8969
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9042
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
9043 TTTTTTATAATGAAAAAGAACAAAAAGATAATTAATATTATGATAATATGGGTTTTACTTACAGATAGAGTAAAAGAAAGGAATATGCAA 9132
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N - S I Q 29
9133 AATTACAGA------AAATCTTC----TT-ATTCAAAAAAACTACTTTATACAATATACATTCCAAAAATATCAGGAG---TTACTCTAC 9208
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
9209 CCGAATATC 9217
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9174
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.37
9175 ATATACATTCCAAAAATA---TCAGGAGTTACTCTACCCGAATAT---CCTTTAAAA---GATGTTCAAAAAGCTAATTTTATCCAGTTC 9255
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
9256 TTTAATAGTATAGTTAAAAAT---GACCCAATATGGGAT---AAT---TTATGTCAAACATATAATAAAGTAAATTCTTCATTTTTTTAT 9336
31 Y - S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
9337 CAAAAAATT 9345
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9300
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.26
9301 CAAACATATAATAAAGTAAATTCTTCATTTTTTTATCAAAAAATTAAAGATGCTTATATTAACTTAACTTTACAAACAGCTCATTATAAA 9390
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
9391 GAACAAATAGCTATTTATTTATCATTTATCTTAAAATTGATTGAAATGCACCCTCAAATACCTATT---AAAGAT---ATGTGCTTAAAA 9474
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
9475 GCAGTC 9480
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9555
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
9556 ATTGAAATTAGTCTTCAACATGATAATATTTGTTTGCACACTTTCCATTTATTACTTATTGAAGAAATATTTCTACAAAACTTTCAAGAT 9645
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
9646 ---AATATTGAACCATTTTCTGATCTCTTACTTAAAGATGAAAAT---GAAAGTAATAAATTTTATAAACAAAAAATGTTATTAATAAAA 9729
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
9730 GATACT 9735
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9952
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
9953 TTATTTTTATTAAACTTATTTACAATAGGATTGATTTTTTCCTTAAGAAATCTTAATATTGGAGCAACCATA---AAT---ATTTTCTTA 10036
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
10037 TT-TCGACC---AAGTCTTGTAATATTATCGCAAATTATTTCACTTTGTGTATTAATGTATGTTTTTTACATTTATAACTTAGTTATAAA 10122
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
10123 ---ATA 10125
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10060
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
10061 TCGCAAATTATTTCACTTTGTGTATTAATGTATGTTTTTTACATTTATAACTTAGTTATAAAATACAAATTTTACAAA---ATTTATTTA 10147
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
10148 TTT---ATGTGCCAATTTGAAACTTTTATAAAAATATGTGAC---ATTTTTACAGGT---GGATATCGATTCTATGAACTTTTATACGAT 10228
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
10229 AACTTA 10234
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10612
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.23
10613 TTAATACAAAGTATGACTCTTTATTATAAATATGATAAACAGATAAGAGAATATATATTAAGAGAT---TTCAAAAGAATATATCAGCCA 10699
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
10700 TATAGTATGCGTTTAATCTTTTTAGGAATATTAATATTATATTATAATTTTTGTTATAGTATGTCATACTATAATTGCATGATAATAACA 10789
31 Y S I - C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
10790 ATACCTTTA 10798
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11044
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.23
11045 CTGTATATGGAACGAGAATTTCATTCTATACGTACATCAACCTTTTTAAATACAATAATGTCTGAT------AAAAACTATTATGAAAAT 11128
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
11129 TTATTATTATCCCTAGATATTAATACAATTAAAGT-ATTGGCAAAAGAATTACTTACAATTGC---TATTATAGTAGAAGATCGTTTTAT 11214
31 Y S I C K N C N Y I K K - K H H I C S N C G Y Y N D S L I Y 59
11215 AGA---ATT 11220
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11952
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
11953 AAATTTAATGACAAAATGCGACTTTTTGTAATAGCATATTCTATAAGAAATATTTGGGGACCTATTTATTTATTTTTTGATAGTATATGT 12042
1 M A V P K K K S S V S R R K I R N V H L K E Q M - K N S I Q 29
12043 AATTTTACACCGATTCCTGAT---GAATATTATTATGATGATCATTATATA---TATGAT---TGGATTTATAATTATACTTTTGTTACA 12123
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
12124 AAATTATCA 12132
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12396
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
12397 GGCTTGCTTAATAAAAATTTTTATAATGTACAATATTTTATATTTGCTAATAACAAAAGTACTTTAAACATGAAAACCAATATAGATTAT 12486
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
12487 TTATATTTTATGGAAAAATTAAAAGAAGAAACTACTATTAAATATATTTTAAATGATTTTGAACAAGTACCAGAAGAGTTAGTCAATAAA 12576
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
12577 CAAATA 12582
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13009
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
13010 ATGGATATAAATATGAAAGAAAAT---TTAACTTAT---ATCATAAGACAAATAGACTTTGAATATTTAATAACTGATTATATTAAA--- 13090
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
13091 CTTAAAGATTT-AAAAATTTATGTATATATGTTTATAGAAAATTATGTCTATTTAGAACTTTGTATCAATATTTTTATAACAAAATAATA 13179
31 Y S I C K N - C N Y I K K K H H I C S N C - G Y Y N D S L I 58
13180 ACAGAAGTTGTA 13191
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13107
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
13108 TTATGTATATATGTTTATAGAAAATTATGTCTATTTAGAACTTTGTATCAATATTTTTATAACAAAATAATAACAGAAGTTGTACAAGAA 13197
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
13198 TTTTCTTTATTGCATCAGTTATATTATTTTATGCGAAATAGTATTGTAATATT-AAGTGT---TATCCAAACTGTAGT---ATCTTTTGT 13280
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
13281 ACAAAA 13286
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13353
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.26
13354 AAAGGTTTGCTTAATAAGATGACTGAAACACAATTAAAAACATTATTAGATATCAT-TTGGAAAAAAATAACAAGGAAATGATCTTATAT 13442
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
13443 CAAAAAATAAAAATCATATGTATCTTTATAAAAAAAAATTACTATAAGATAAACATAATCAATGATTTTATACCA---GTGTTCTACATA 13529
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
13530 ACTGAA 13535
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13662
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.37
13663 ATTAATTTAGATAAAGAAGCATGCGAAAAGGCTTTTAAAATAATAACAACGATA---TTACAAGAAGATGAAAAAAATTTAATTAAGAAA 13749
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
13750 AAACAAACCACAACAAAATG-GGAAAAAGTAATAAGAAAAGTAATATA---CGA---TGCAATTAT---GGA---AGCACAAAATATAGA 13826
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
13827 AAAATC 13832
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13922
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.23
13923 TATTGCTTATCTTTGATGGAAAGAGTATGGACAACATTTCAAGATAAAAATATTACTAGTATTCAATTCCTGAAAACATCGTATGTGAAT 14012
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
14013 TA-GCAATAGGTATAGGTACTTCTTATATTGAATGGTGGTACAGTATTTTTATTAATAAAAATATGTATAAAAATAAAACT---TATGAA 14098
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
14099 GAATTT 14104
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14260
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.31
14261 CATAACATTTTTAAAGAATCGAGTACTGCTGGATCTAATAATCCAAGATCTTTAAGTTTGAATGAAAAATATGAAGATAGTATTACTACA 14350
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
14351 TCTAATCTTTTTGTTAA-ACCAATTTTATACCCAGA---AAT---GTCTT-ATGAATTTGAATCTAAAATCGAGCGCAAAAGTTTTTCAT 14432
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
14433 TTAAAC 14438
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14386
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
14387 ATGTCTTAT---GAATTTGAATCTAAAATCGAGCGCAAAAGTTTTTCATTTAAACTATTAAAGAAACAAGAGCAGGCTAAAATACCAAAA 14473
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
14474 TTCACTTAT---AAAAAAACATCTAAATTAAATACAATATTAAATACA---AATGATGTTAAATATTGTATAAATAAACCTTTTTTTAAT 14557
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
14558 TTTTAT 14563
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14668
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
14669 TTTGACATAAATAATCTTTTATCTAATTGTAATATAAATCATGTAAAAGATTTTCTAGTATTTATAGGTAATCATAACAAATTATTTGAT 14758
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
14759 AATCACTTATGCAAAAAACTA---ATTCTTACAAAAAAACAATATTTATCTAAATATTCAAAACTAATGGAAAAGGGTTTAGAAAATAAA 14845
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
14846 CTCCAT 14851
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14872
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.29
14873 ACTCTTGATCAATACATTCAACATGATTTGAATAAAAATGAACAGAGTACTAAAGACTTAGCTATTTTAGCTAAAGAG---ATAAATGCT 14959
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
14960 GCTAAACTACTTTTAAATTGC---TATTATAAAGTAGTTGCTCAAAAATTTTATAATGCTCATTTTATAAAAGATGCCATAATTTATCAA 15046
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
15047 CATTTT 15052
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14881
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
14882 CAATACATTCAACATGATTTGAATAAA---AATGAACAGAGTACTAAAGACTTAGCTATT------TTAGCTAAAGAG---ATAAATGCT 14959
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
14960 GCTAAACTACTTTTAAATTGC---TATTATAAAGTAGTTGCTCAAAAATTTTATAATGCTCATTTTATAAAAGATGCCATAATTTATCAA 15046
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
15047 CATTTT 15052
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15250
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
15251 CAAAATATGAGCTTTGATTTATTTGAAAAACAAACTAAAGATTTACAGGATGAACATTTAGCAAGCTTTTTCAATAAAAGTACACCATTA 15340
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
15341 ATACAACATAGCTTAAGTTTTGATTATTTATCTAAAATGATACACATAATTAAAAATTATGCTAAA---AAACCTGGGGAGATATTAAAT 15427
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
15428 ATTCTT 15433
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15436
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
15437 ATTTTATATTATAAAGAAAAAAATGCTTTATATAACAATAGTGAACTTGTTATATTTTTAGATAGTACAATGAGCGGGTCTCAACATTTA 15526
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
15527 GCAACAATATTTAAAAATAAATTAGCAGCTAAAAATAGTTGTTTAATTTCTACAGATGAAACTAAATTT---GAC---TTAAATATTAAT 15610
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
15611 TGCCTT 15616
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15466
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
15467 TATAACAATAGTGAACTTGTTATATTTTTAGATAGTACAATGAGCGGGTCTCAACATTTAGCAACAATATTTAAAAATAAATTAGCAGCT 15556
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
15557 AAAAATAGTTGTTTAATTTCTACAGAT---GAAACTAAATTTGACTTAAATATTAATTGCCTTGAAAAATT-TCAGCTATTTATTACAAA 15642
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
15643 AGCATT 15648
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15736
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
15737 CTTTGTAAAAAAATATTTAATTCTGAAATTACTATTTCATGTTTAAAGTCATATTTAAAAAAAATGGCTTTTAAATATGAAGTGACTCCT 15826
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
15827 TGTGCAATTTCCGATACTTATTCTTTTCCTGATTCTTTTATGCAAGAATGTAAA---TGT---ATAATATCAGATAAAGTTTTAATGAAG 15910
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
15911 ---ATA 15913
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15883
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
15884 ATAATATCAGATAAAGTTTTAATGAAGATATCAAAGAAAAAGAAAACTATTGTATTTTTAAAAAAACTATTAATA---GTTTTTTATGAT 15970
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
15971 TATGCTATAAATAAA---ATAAAT------AAAAAAGAACCTTGGATTTTAGAAAAT------ATCATGGATCGGATTATAATTAAACAA 16045
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
16046 AGTACA 16051
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16069
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.31
16070 ATGACAATAGGAGGTAGTCGTAAATCTATTTCAAATGCGCTCATTGAAAAAATAATTGAAAAAGGAAAATTTGATATAAACCTTTCTTAT 16159
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
16160 ATTCACATATTTTCTGATATATTATCTAAATATTATAAATATTTTTATAAAACTAATTATTTACCTTATTGTGATACTTATTTAACATTA 16249
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
16250 CGAGAA 16255
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16267
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.34
16268 ATGGAAGGTCCTTTAACAATGTCAACAGAATTTTTAACATGGTCATATAATCCAAGAAAAATGAAAATATTACGTATAAATGTTGTAAAA 16357
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
16358 TATTCAAAAATAACAAATGACCTTAAATCTTTGAAACGACGTATGATTAACGTAGCATATTTTACAGGAAAAATTGATCAAACTAAAATA 16447
31 Y S - I C K N C N Y I K K K H - H I C S N C G Y Y N D S L I 58
16448 TATAACTCAGTT 16459
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17006
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
17007 ATCCTAACACATAGTAAAGGTTCATCTGTTAATCCTAG-CAAGCCCTTAA-ATTCATCTGAAAATCTTTATGATTATCCATATTTTCAAT 17094
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
17095 ATCTTATAACGGCTAGTGAGGTGT---TATATATTCCAGAAGCTTGGACTTATTCAAAAACGGTCCATGGTTTTAAAGTCT---ATTTGG 17178
31 Y S - I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
17179 AGGAGTTTA 17187
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17133
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
17134 CTTGGACTTATTCAAAAACGGTCCATGGTTTTAAAGTCTATTTGGAGGAGTTTAAAAAAAGTCAATCTTGTTAAAGTAAAAGTTCACACT 17223
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
17224 TAAAATGGTTTGTTAACTAAATTTAATAAATTAAAATGT---TTTCATGTTTC-CTTAAT---AGCATTTATAATTCTTTTTATGTTAGG 17306
31 - Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
17307 TAGACATCT 17315
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 18201
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
18202 ATACTTTGCTTTATTTCATTTAGTAAATATGCTTTCTTTAAAGCACTCTTATTTTATGTGCCGGATCCGTTATCCAC-GCTACCGGCCAT 18290
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
18291 CAGGATATTCGGCGTATGGGAGTTTATTTAAAGATTACCCATAACTTATGTTGCAAT---GCTCTTGCTTCTTTATCTTTAATT---GGT 18374
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
18375 TTTCTT 18380
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 19855
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.18
19856 GCTTCAATTTTATTAAACAAGAGATTCTTTAACAACTATACTATT---GATGCTTATTTAAAGGACATTATGATTTTCAAATGTCACAAT 19942
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
19943 AGTACATCATGTTTTAATACTTTATATTTCCTTATAATGAT-AATATTATTTCT---TTAAACCGCTATATA------TTAATAAAACGA 20022
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
20023 TCAATA 20028
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 20154
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
20155 TTGATAATTCATTTTAAGAAAAGTTA-GTAAAGATATTTAGAACGCTATTTTTGTTATATTTAATTATTAAACTAAACAAATCAACTCTT 20243
1 M A V P K K K S S V S - R R K I R N V H L K E Q M K N S I Q 29
20244 AGTTCTTCT---TGCAAATACAACAACACTACCAAATATGATTTATACTATTATCACAAACGATTACATTATTTAAAATAACTTATAAAA 20330
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I - 58
20331 TATCTTAGCATA 20342
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 20975
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.27
20976 ATAAAAATGTGGACCCAAAGTTTTTGCATTACTTTAAATAAA---TCCAATATATTTCTAGTAGATTACGATTTTAATCAGATATAAGCT 21062
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
21063 TATGGTATATATACAAGAGTTTTCACAAAAAAACAAAATCATATCATTTGTTTTAACAGAAAAAGGGTCTTATCGTTAATTAAAATAAAA 21152
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
21153 CGGAAC 21158
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 21491
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.21
21492 ATTAGTAC-CCTCGGATTAAGAAAAACTTTATTCGCAAACGAAAAGGAAAGGACGTTTTATTACATGGTTCCTTTTAAGAAAGTGATATA 21580
1 M A V P K - K K S S V S R R K I R N V H L K E Q M - K N S I 28
21581 AAAAGTTACTT-ATTTGCAGTTATTTACAA---GTCAAACAATCTAATAAAATTTAAGGA---TTA---TATTTAAATGAATATAAGATA 21660
29 Q N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I 58
21661 TATTTCCATAAA 21672
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 21745
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
21746 ATGGTACTTTTTCTCAATATATTAAAAATATCGTCAAACAAAACAATTCCGATC---ATCACACCTCATTTTGAAGGAGTCCTTTTAAAT 21832
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
21833 ATGTACTTG---CATGGAGTAGGAACAGTTAAACCAAGAAACCTAATTCTGCAAACGCAAAATTAC---AAA---AGTTTGTTAACTAAT 21913
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
21914 GGTGTT 21919
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 21820
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.24
21821 GTCCTTTTAAATATGTACTTGCATGGAGTAGGAACAGTTAAACCAAGAAACCTAATTCTGCAAACGCAAAATTACAAAAGTTTGTT-AAC 21909
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
21910 TA-ATGGTGTTATTTAATTGCTTATATACCAGGATTTGGTATAGATTACAAAAAAACAATGAAGTAATGATAGGGGAGGTCGTGTACCTG 21998
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
21999 ATTACC 22004
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22018
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
22019 ATGTATGCGTTTAAAAAAAGATTTTATGTGGTTAGAAAAATTGATAGATATCAACGTGTAGTAAATATGGTGTGGAAATCCTAATCGTGT 22108
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
22109 CTTGATATTTTAAATCGTGAGAAAAAAATAAAGCAATCGCC----GTGAAAAGTCAAGACATTACACAAAATGATAAAAAATTAATGAAA 22194
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
22195 GAATCT 22200
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22884
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.37
22885 AAAAAAAAAAGATATAAAAAATCTTTTAAAAAAGTAAGAAAAAATAATAATATAAAAAGTAATAAAAAATTTAAAAAATCTAAACGTCAT 22974
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
22975 ACTCGTATATCAAAAAAAATAAAA---ATAAAAAATAATGAATAAATATC-ATA---TGCATAGCTTATCATTTTTTTGATATTTACAAA 23057
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
23058 ---CTA 23060
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22884
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.37
22885 AAAAAAAAAAGATATAAAAAATCTTTTAAAAAAGTAAGAAAAAATAATAATATAAAAAGTAATAAAAAATTTAAAAAATCTAAACGTCAT 22974
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
22975 ACTCGTATATCAAAAAAAATAAAA---ATAAAAAATAATGAATAAATATC-ATA---TGCATAGCTTATCATTTTTTTGATATTTACAAA 23057
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
23058 ---CTA 23060
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 23201
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
23202 TATTCTTCTGAATATAAAGCTCTTGTATGCATTCACTATATGATCCA-ACCGTTCTGCTAATATTGCTTAGTTTGTTATCTGTGGGAATT 23290
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
23291 TTTTCTTATATTTTACAACAACCAAACTTCATACGGTGATGTAATCATAATTTGTC-ACAATCATAACAAACTTTGGTGATTCATTATCT 23379
31 Y S - I C K N C N Y I K - K K H H I C S N C G Y Y N D S L I 58
23380 TACAAGGAATAC 23391
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 23652
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
23653 GTGGCGTACTCGAGGTGGTGTACAGCCCATGAATAGAAAAGGTATATTACTTTACATGTAAAA---CAGTTAAAAAAC---ATATCCTAG 23736
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
23737 TATACTTATACTAAACGACAATTAAAATTATTACGTTATGAAAGTACCTTTGTTAATTATGA-GTTATTAACAAAGTAATTAAAGAATCT 23825
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
23826 TCTATA 23831
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24044
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
24045 AAAAAAATAGCGAAAATGAAGCGAAAAATACTCAGAAAAAAGTACGTAAAA---CAGTTGTCAAAACAGTTAAAAAACCTACTAAA-AA- 24129
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
24130 GAAAAAATAATAATTAATATTTATTTTAATAATCAATTATTTTATTA-GATTTTAATAGTAATGATATCAATAAACTACTTAGTAACAAA 24218
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
24219 TATTCT 24224
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24342
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.27
24343 TTCTTGTTACCTTTTACGTCATTCCATTTGGTAAGATTAATTTTACGTTCGCTT---TTATACTTT---TTTAAAAATTATGTTTAATAT 24426
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
24427 TATTGCTTATTTAAAAAACAAATTTACTTTCCTATCAGATTTATCAATTTATCAAATTTCAATTATATCATTGGTACAATTTTATCATAC 24516
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
24517 ACATTA 24522
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24466
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.26
24467 TTATCAATT---TATCAAATTTCAATTATATCATTGGTACAATTTTATCATACACATTATAATTATAAAATTATAATAAGTTAT---GGT 24550
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
24551 TTTCTTTTAGTGCACAATAGTTTTCATATTTTCAAATCGCACCGTTTAGGTTTTATTGTTATCTTCTATTATAAATTATATTTCTTTTTG 24640
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
24641 TGCACT 24646
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 25030
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.21
25031 TTTGCTTCATCATCTGAATCTTCTTCTAGTACTGACTCTGAA---GAAGAGTTGGATCTAAAAGATCAGGTGAATCTCTCTTTGCAA--- 25114
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
25115 TTCTTTTTTGAGGATTTTAAAAACACTGTAGCAACAATTTAT---CTT---GGCCATCCTCAGTATTATGAGCAATGTCTCAATTTTGTG 25198
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
25199 GCTACA 25204
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 25270
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 40 Length-adjusted: 0.65
25271 CTTTTACTGGATGCTATTAATTATCAAGTAGAACGAACTCATCCTGAAGATCTCCATACAGTACTTGCACTTAAATCCTCAATTATGACT 25360
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
25361 TATAATGTTTGTAACCTTCTTAATAAACTAGATGATCCAGAAGTAGTTGAAAAGGTTTTTGAACATACTAATTTTGAATTAGCT---AAA 25447
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
25448 GATTAC 25453
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 26085
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
26086 ATGTAAATAGCATCAGGATAATCTGGAATACGGCGTGCATTCCTGCAAGACCTA---ATAATGCATAG-GGAAGAAGTAAGATTAACACC 26171
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
26172 AATGAAGTAGTAATGAAATGTAAATACCAGCTGTTTCAAATAACTAAAATCAGTACGACATAAGGAATTTTTTTTCGTAATTCAAAGGAT 26261
31 Y S I C K N C N Y - I K K K H H I C S N C G - Y Y N D S L I 58
26262 TATAAACAAATT 26273
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 26521
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
26522 GTTGCTAA-CCACTAAAAATCTTAATACCGTTGGCACAGCAATATCATAGTAGCAGCGTGAAATAAGCG---CGTATCCACATCCAATCC 26607
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
26608 TACAGTATACATATATGAGCCCACACTATAAAACCCAAATACCAATAGACAACATAGCATACACCATACCTAAATAACCAAAAATACTTT 26697
31 Y S I C K N C N Y I K K K H H I C S - N C G Y Y N D S L I Y 59
26698 ATTAGCATA 26706
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 27090
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.31
27091 ACAGTCCAACCAGTTCCA---GCACCATTTCAACATAAGAAGATAAAAGAAGTAAAATTAAAGAGGAAGGTAATA---ACCATA---AAC 27171
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
27172 TATATTATTTAAACGAGGAAATGC---CATATCAGGAGCACCTATAAGTAAAGTACAAAC---CAATTTCCAAACCCACCAATTAAAGCA 27255
31 Y S I - C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
27256 GCATCACAA 27264
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 27205
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
27206 GCACCTATAAGTAAAGTACAAACCAATTTCCAAACCCACCAATTAAAGCAGCATCACAAAGAAAAAAATCATAATAAGGCATGAGCAGTT 27295
1 M A V P K K K S S V S R R K I R N V H - L K E Q M K N - S I 28
27296 ACAATGTATTATAAAGTTGATAATTA-AAT---TTAAAATTAAATCACCACAACTGCTAACTCCATACGCATATAACAGATAAGGCTATC 27381
29 Q N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I 58
27382 CAGCTAAACCAG 27393
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 27882
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
27883 ACTATAATACCTTAGAGAAAAATTTAAAATGTTGATCAAAGCTTCCATAAATGTTT-CATATCAGAACGAGTTGGTTAACAAATTTAGCA 27971
1 M A V P - K K K S S V S R R K I R N V H L K E Q M K N S I Q 29
27972 AGGAACAGTTATAAAACCATCTGTAATTC-GTTCACAAACTTGAGCAATTATGGAGCAACTT-TCTCTCATTTCAGTAACCCTAATCATA 28059
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
28060 AAACGGTCA 28068
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 28067
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.21
28068 ATAACAATCTCCTTCAAACCTACAGGTATTTTAAAATTAAATTCTTATAATTTTCAT---AATTATAAATTTTACGGAATCATAAGG--- 28151
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
28152 TATACCCTACCTCGAACCATAACACCAGAAAAAGCATATCTTTAGCAACATCTATGTAACTTTTCCTATATTTACAACGATCTTTAAATA 28241
31 Y S I C K N C N Y I K K K - - H H I C S N C G Y Y N D S L I 58
28242 TTCGATTATCTG 28253
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 28365
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
28366 TATGCATTCTTGCACCGATACACGTTCATAAAATTCATCAATTTTTCTCGCTCTTCAAAAGCCCAGAAATGGTGTTAAGGCACCAACATC 28455
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
28456 CATAGCATGTGTCGTACAGCTAATAAATGATTTAAAATTCTAGTAATTTCTAAAAACAGACACGAATATAGCGAGCCCTTTCTGTATATC 28545
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
28546 TATATA 28551
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 28554
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
28555 TATAATGCTTTAGCACATAAATCATTAATAAATTTTCTACAGCTAAAGAATAGCATGTTCTTGTGCCATCATGATACATAATCAAGACAT 28644
1 M A V P K K K S S V S R R K I R N - V H L K E Q M K - N S I 28
28645 CAAAATAAGGAAGATTGTAAGAAATT-CTTATGTTCTATAAGTTTTTCAGTACCTCATGTAGAAGCCCATATGTGGATCGCAATTCTGTA 28733
29 Q N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I 58
28734 TACCTCACCATT 28745
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 29333
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
29334 TTTGTGGTTCAAAATCTCTTCCATAGAATAAAGAAGAGCAAATAT---GGAATAGCTATGGCAAATAG-ATAAAAGAAGGAATT---AAT 29416
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
29417 GTCCAACTATTTCTAGAATGTACCATGATTTAAATTAGAAAATAATAATATTGTTTT---TGTCGAATATATTTTTTTTATTTGGTTTAT 29503
31 Y S I C K N C N Y I - K K K H H I C S N C G Y Y N D S L I Y 59
29504 CCAAATGTA 29512
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 29544
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
29545 GTAACAACCCCAAAATTAAAATTAAAACAAATAAATATTATGATGAAG---ATCAAT---AAACCTTCCATCAAAGGAGAAGCT---GAT 29625
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
29626 CTTGAAAATTC----CATTGCCATTACGTGCTAAATCATAATCAT---TGTAAAATAATTATTATGTTTTTAATTAATATTTATTGAAAG 29708
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
29709 TATATT 29714
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 32139
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
32140 ATTCATCTATGGAGTATTTACAATCATTATTCAAGGTGTAATTGTTTGGGAGTAAATAGAGGATTTTTCAAAGATACATCTGTAGG-ATG 32228
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
32229 AGGTCCTTGTGTAAAGATAACTAGCAATTTAAGAAAATAATGGAGGTCTGTAAATTGAGTGATATTGCTCGGAATAAACTTCCATATTTT 32318
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
32319 GGCAAA 32324
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34125
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
34126 ATGGGGTTTTAAAAGGATTGCGATTAACATGTTGATAATGTCCATTCTAGAGATTATACTTTAGAGAAGGAAAAAGGTAAACACTTCTTT 34215
1 M A V P K K K S - S V S R R K I R N V H L - K E Q M K N S I 28
34216 GTGGATTACTCCCACTTCATCCGTTTTAACTTAGTATGGTCTTA-CATCCTATCGC-AGTTGCCACGGTTT-TATACTACAATGCTTTTA 34302
29 Q N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I 58
34303 TATACATCCTTA 34314
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34316
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.24
34317 ATCTCTTTGATATACTTATATGCTTCTTTATCTCGCGAGGATATAAGA---GTCTTTTTAAGCATATCACTTTCTAAGATTACCTGTAAA 34403
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
34404 TTGTATATTGCCCCATATAGGTCATCG---TCAAATATACATAATTCGGTATTC---TGCATACTTGTGAATAATGCTGTAACATCTGAA 34487
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
34488 AGTATA 34493
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 37180
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
37181 CAAAAAATATTAACATTTCAGAATAAAATTAACAGTAGAAGAAACCCTAAATTCGCT---AAAGAAAAAATAAAAAAGAAGAAACAAAAT 37267
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
37268 ATTGGCATAACAGTAACA---AACCAC---GATAATAGAAAT---ATTACGTGATTTATATCATCATATAACATTCCATTGCTA---AAA 37345
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
37346 ---ATA 37348
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 37240
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.26
37241 GAAAAAATAAAAAAGAAGAAACAAAATATTGGCATAACA---GTAACAAAC---CACGATAATAGAAATATTACGTGATTTATATCATCA 37324
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
37325 TATAACATT---CCATTGCTAAAA---ATAAAGCGGAAGAAGAAACCCATGAGCATTTGCAATAATAAAGAACCTGTTAAACTAAT-AAA 37407
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
37408 TCTTTT 37413
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 37534
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
37535 TTAATGGTAGAAATAAAAAGAAGCATTAGGAATAAGAAAAGAGA-AAGCGTATAAAACCTAAGAACCTAATTTTAAAAGATTCCTGCTAA 37623
1 M A V P K K K S S V S R R K I R N V H L K E Q - M K N S I - 28
37624 CAAAACACTACCGTAGT-AGGAGCTTCAACATGGCTTTAGGAAGCCATAAATGGAAAGGAATCATCGGAAT-TTTGATCTTAATCCTATA 37711
29 Q N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I 58
37712 ---AAAAACAAA 37720
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 38157
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
38158 TATAATAGATGTAGACAATGTATTTGTAATAATCC-TATAGAATAATAAATATA---ATAAAAGAAGCTGCAAGGAATAATTATGAACAT 38243
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
38244 TATAGTTTTATT------TGCAGTATAATAAATAAAGAGATT---ATAGTAAATATATT-AAACAATTTAACAAAAG-ATCATAATAAAG 38322
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
38323 AAGATA 38328
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 38752
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
38753 AAAGGACATCATTATAAAAAAGCTATTTTAACTAATTCATTTATATATTCTGACATAATTAAACGGTAAGTGGAATAAAAATTAAAAGTT 38842
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
38843 AATAATATCAATAAACAACTACTTTTTATCAAATTGACTTTATTATATTGTTTTATATGC---TTAGATAAAAAGTCCTGCATTTATATA 38929
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
38930 AATGAT 38935
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 39176
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
39177 ATTCTCATTTACGATAGATGGACAACGATA---AGGTTTCAATATCCTGCTGTTGCATTATTA---CAAAAAAGGCGTTCCAAGAGGAAC 39260
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
39261 AAAAATATTTGGCCTTTACCTAAAGAATTGCGTGAGAAGGTT---ATATT-CGTTTATGTCTTTGGGTACAT---CGCTTTATAATGAAA 39343
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
39344 TCTCTA 39349
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 39726
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
39727 ATTGCTCATTGGGAACGATTAGTAACTATTTCTTTTAATAATCTTCGATTAATAATTTTATCCTTTATTTTTTCATAAAACGCTTATTTA 39816
1 M A V P K K K S S V S R R K I R N V H L K E Q M K - N S I Q 29
39817 GACTA-AATGATTC-CATATTACAAAATCAATAAAAGATAAAAAACAAGTATGCAGT---TTAAAGCGTAGAAATGGAACGACGTTATTA 39901
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
39902 CAAGTTATG 39910
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 39838
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.35
39839 AAATCAATAAAAGATAAAAAACAAGTATGCAGTTTAAAGCGTAGAAATGGAACGACGTTATTACAAGTTATGAAATTACAAGTACTAATA 39928
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
39929 TTGGCTTTATGCCCTAC-GTACACTTCGAAAGTTCAATTAAAAAATTATGTCTTATAACAGGTAGAGCACGTTAA---TTTATTCCAAAA 40014
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
40015 AATTTA 40020
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 41107
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.26
41108 TTACATTTAATTTTAAAGAAGAAT---TTATCCTTCAACTGGTTTAGA------TATTTGGAAAAAAATACCAAAAGA---TATGAAAAT 41185
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
41186 ---TCGTTGTGTGTGGAAAATACTTACGA-AATAAAATCTTACATATTGTTATAAATGTATCGTTTATTTCAAAATCTTCC---TACAAA 41268
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
41269 GGACAA 41274
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 41107
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.26
41108 TTACATTTAATTTTAAAGAAGAAT---TTATCCTTCAACTGGTTTAGA------TATTTGGAAAAAAATACCAAAAGA---TATGAAAAT 41185
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
41186 ---TCGTTGTGTGTGGAAAATACTTACGA-AATAAAATCTTACATATTGTTATAAATGTATCGTTTATTTCAAAATCTTCC---TACAAA 41268
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
41269 GGACAA 41274
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 41433
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
41434 AGAAAAAATGAAAAAAGAAGACAAAAACAAAAAAGCCGTAGATCTAGACAAGAATTTATTAAACATCAAAGACTTAAATCATA-ATTATG 41522
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
41523 TTTATAATAAAGATCAATATTTTATTTATTATTAATAAATCTTTAGTA---TCCATTAAACTTTATGC-AATGATATTCTATTAAACCTA 41608
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
41609 AGAATT 41614
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 41622
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
41623 ATGTTAATTTTCTAAAAAAAAATACATATTATTAATTACAGCTAC---GCTATTGATCAAATAAATAAATTT---AAC---GTTTTTTAT 41703
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
41704 TAT---ATATGTCTT---TGTACTTATACAAAAGCACAGCAT---ATTATTTAACATATAATACAATTTAACAACACCATTATAATTGAT 41784
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
41785 TTATTT 41790
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42023
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 34 Length-adjusted: 0.55
42024 TTTATCGTACAAAAATAAAGGTCGAAGAAAATATAAAAAACCTACTTTATTCGCATAGTAAACTTAGAAGAAAATTTAAAGAAAGATAAA 42113
1 M A V P K - K K S S V - S R R K I R N V H L K E Q M K N S I 28
42114 ACGTTATTTGGTATA---AAAAAAATAAAC---GTCGAAAAGAAAAAG---ATATTTAAGGAA---TCATATTTTCGTGATATATTTTTC 42191
29 Q N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I 58
42192 CAAAAGGACGTC 42203
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42036
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.34
42037 AATAAA---GGTCGAAGAAAATATAAAAA-ACCTACTTT---ATTCGCATAGTAAACTTAGAAGAAAATTTAAAGAAAGATAAAACGTTA 42119
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
42120 TTTGGTATA---AAAAAAATAAAC---GTCGAAAAGAAAAAG---ATATTTAAGGAA---TCATATTTTCGTGATATATTTTTCCAAAAG 42197
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
42198 GACGTC 42203
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42655
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
42656 TTTGATATTCCAAAAAGAAGATCACATGGCTTACTAGAAAGAAAAAGGTTCGCCGTTTATAGAATATGACTCCAGACTTCAAAAGACATT 42745
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
42746 ATAGATATAGAACCTTTATACAATTATACTTACAGAAACTAGAAGATTTCTTTATACAGGCCATATTTAAAACGAAAAAAACGTATTAAA 42835
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
42836 TATACT 42841
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 43323
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
43324 ACGATATTTATTAAAAATTATAAGAGCTA-AATTTAAGAGACTTTATTAATTCTAATCTTAATAATTATTACTTTAAACATATGTATATA 43412
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
43413 TATTTTTTTATCAAATTTAATAATAGATTAAAAATACTTAGCAGCTCCTAAAAAGCTTGTTATTTTTTTAGAATAAGGAAAATAATATTT 43502
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
43503 GATATC 43508
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 43811
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
43812 CACGATGTTCTAGAAAAAAAGGATTTTCTTTCTAAAGATAGTTTATGA---ATAGGAGTGAATAATTTTCTTAAAGAT---ATTTTGTTT 43895
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
43896 TACGCAATTATAAAAAAAACGTAACATTTAGCTAAAAAACGAAATCAACACGAAATTCATAAGGTTTACCAAACGAACTTTAGGTTTTTC 43985
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
43986 TTGAAT 43991
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 44382
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
44383 AATTATAAGCCTTCAAGACAATAAATACTAGTATATGAGCATATG---AATATT---ATTCAAACACTTATGGAAAATATGAGCATCAAT 44466
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
44467 ---TCCTTGAATAAAAAT---AGAAGGAAAAGTAACAATCATTTGATTATTAGAAACACCATAAT-TATGATAAATACTAAATCTATACG 44549
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
44550 AATATT 44555
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 44478
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
44479 AATAGAAGGAAAAGTAACAATCATTTGATTATTAGAAACACCATAATTATGATAAATACTAAA---TCTATACGAATATTTTTTGATAAT 44565
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
44566 ATCATTCTCCTTCGCTTTTGT------ATTAGGCACAGAGAAACGATGTCGAGTAACTC-GTTTTTCTACCTGAGTCATTTCCCAGGATA 44648
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
44649 AATATT 44654
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 44918
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
44919 AACGCTTTGTACAAAGCGTCGCGTTTAATAGGATAGCCAATACTAATTAATGTTAAATTATTAACACAAAAAAGATAATTAATAATGGTT 45008
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
45009 TTCCGTAATTCAGAAGATATCTGTAACTTAATTGTTTCATATGTTACAATATCGAATGTAGGTGCTGTCCACAATATAAAAAGAGCATAT 45098
31 Y S I C K N - C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
45099 CCCAAAGTT 45107
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45090
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
45091 GAGCATATCCCAAAGTTTCAGATTTCTCTTGATTTAAAAACTCTACTAACGATTTATTTAAAA---TCTTTAAAAAGAAGGATTCTAAAA 45177
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
45178 ATTTACGTT---GAA---TTTCAATTTTATAAATAAAGGAATTTATCGCTATCTGAT---AAATATCAGAA-GATTCTGAACCAATAACA 45257
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
45258 TCGCTA 45263
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45482
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.24
45483 GGTAATATTTTCCTTTATCCCGAACGTATAGGTAAAAGAAAGTACAGG---GTTCAT---AAAGAA---ATGAGAATGAAT---AATAAT 45560
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
45561 ATAACCGTTTT-------TGTAATAC-TCGAACAAACAAAATGCTTGCTGTTGTTGAGCTAAGTACTTTGTTTCTTTAAAATTATATTTA 45642
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
45643 TCAGAA 45648
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46025
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
46026 GAATTAAACGATTCAAAATTGGCTAAGATTGGGGATAAGAAATATACTATACTAAAAAGAGTCCTTAAACGTTTTGAAAGTATACGTACT 46115
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
46116 CGT---TTATCGAAAGTTTTAAACGGCTCCGAATTTTCGGATACCATAGCCAATGACACAGGTCATGTTAAGAAATCTATTATGAATTTA 46202
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
46203 ATACTT 46208
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46259
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.18
46260 ATAGCAAAACGTATCAAGGATTATGTTATTAATGATAATGATATTCTTATGAATACGGATAAAGATAAATTGGCTCAAGCTATTGAAAGT 46349
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
46350 GCTAAACTTATTGATTTATCTAAACCTAAAAAATCTAAAAATAAAATAGATCCTTCTAAAGCTGTTGTTAATACTACTAGTAAAAAGAAA 46439
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
46440 AATAAA 46445
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46364
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
46365 TTATCTAAACCTAAAAAATCTAAAAATAAAATAGATCCTTCTAAAGCTGTTGTTAATACTACTAGTAAAAAGAAAAATAAAAGGGGTTCC 46454
1 M A V P K K - K S S V S R R K - I R N V H L K E Q M K N S I 28
46455 ACCCCTGCTAGCATAGCTAAAGCTGTCGCTTCTGATAATAATCCTATTAATAATATTTAAAATTATGA-TATCTACATTACCAATTTATA 46543
29 Q N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I 58
46544 AAATTCGAAAGCATT 46558
59 - Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46686
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
46687 CTAAGTATACAGGAGCAACACCA-GCGATTCCAGTAACTCAAATGCCTTCAATA---CTCAATCCTACTCATATTGCATATATTCAACAA 46772
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
46773 TTAGAAGCTTTTCAAGCAGCAACTTATGTTGAAGGGAAATTTTCAGTGTTAGAGGGTATTGAATATATACATAATAATCAACCACGATTA 46862
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
46863 AATAGG 46868
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46686
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
46687 CTAAGTATACAGGAGCAACACCA-GCGATTCCAGTAACTCAAATGCCTTCAATA---CTCAATCCTACTCATATTGCATATATTCAACAA 46772
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
46773 TTAGAAGCTTTTCAAGCAGCAACTTATGTTGAAGGGAAATTTTCAGTGTTAGAGGGTATTGAATATATACATAATAATCAACCACGATTA 46862
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
46863 AATAGG 46868
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 47255
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
47256 CTAGCATTTGGTATA------TCAAGAGTCATACGAGAGCTACTTAAAAAGATTAATATATAACAACAAATACTGTAACTCTTAAAGTTT 47339
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
47340 CGCAAAATATGT---AATTTAAACAAAATAAAATTAGACGCTAGCATATT-ATTAATCTAAATCAGTATCAAAATAAGTAAGTAACTTTT 47425
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
47426 TCG--- 47428
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 47255
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
47256 CTAGCATTTGGTATA------TCAAGAGTCATACGAGAGCTACTTAAAAAGATTAATATATAACAACAAATACTGTAACTCTTAAAGTTT 47339
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
47340 CGCAAAATATGT---AATTTAAACAAAATAAAATTAGACGCTAGCATATT-ATTAATCTAAATCAGTATCAAAATAAGTAAGTAACTTTT 47425
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
47426 TCGTTT 47431
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 49312
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.34
49313 AGAGTCCTCACACTAGCTAAGGACCGC---AATAAAACTTAAGTCAAAGATATCTTATTACAAAGACAAAAGGATGTAGGCTTTCAAGCA 49399
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
49400 GCATCTTTTAAAGAAAGCGT-TACAGCTCACGTTTCAAGTACAAGATATT-ACAAATAAAGGATTTTTCGTTTTATCCAAAGTAGTGAAT 49487
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
49488 TTTATT 49493
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 52342
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
52343 GGGGGTTTAAAGCTAACGCGTGAAACACCGCCTGGGGAATGTGGCCGCAAGGTTAAACTCAAAGGAATTGACGGTGACTT-ATACAAGGG 52431
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
52432 GTGGAGATGTGGTTTAATTCGAATACCGCGCAAAACCTTACCAATTTTTGT------ATTGGTTTCTTTTCGTTAGCCATTTATTTGGTT 52515
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
52516 AGCCTT 52521
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 52933
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.18
52934 ATGTGGATCATTACGCACGGTGAATTAGTACAAAAGTCACGTACAGACCGCCCGTATGCTATGGAAACTATTTGAAGTAGAAGTTACAAG 53023
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
53024 GTTTCAATTGTTTCGATAGACCACCTTATTGAAAGTTTTCATAAGGCTTGACATTCTGTTGGCTTTGTACACGATCTTTATTTAGGGACT 53113
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
53114 GGAGTA 53119
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53094
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.32
53095 CGATCTTTATTTAGGGACTGGAGTAAAGTCGACAGGGTAGTGGTAGAAGAATCTGCTGCTGGACCATTATTAAAAATTACAACTTTAGCA 53184
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
53185 AGCACTTTGTGTAAACTCTGT------ATAAAGAGTAAAATATACAAAATTGACGTGATTAACGAAATCGGAAAAGCACTAATGTTTGTT 53268
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
53269 AAATCT 53274
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 54432
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
54433 TTGGAATTGGTCAAAAAAAAAGTTCTATTTGAATATTCAAACTTACTTCAAAATAATAAAGCGCTCATTATACTACTATTGTTGCTGCAA 54522
1 M A V P K K K S S V S R R K - I R N V H L K E Q M K N S I Q 29
54523 CGCTGCACAAAGTGCCTCTCTTCAGTTTATTGCTCCATA---TACAGGATGTGCATTGCTGAA---TTTTATCGTGATAAGGTGAACATG 54606
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
54607 CTTAATTAT 54615
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 55437
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
55438 TATATATAACTTAAAAAAGAGATTAATATTTAAAGCAATAAACTT---CATATATATTTATATAATAGTAAAATTAAAAAGATTAAAGGG 55524
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
55525 CATTACTTCCATAAGCATACACATTACAAATAAAAGTAACCAAACACATCAACGAAATGCCAATACCAAGCCAAGCTTCAAATCCTAAAT 55614
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
55615 GACTTT 55620
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 56100
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
56101 TTAATCTCTCCACCAAAAACCTCTAAAATAGCAAGTAAATAAAAGAAGAAGTTAATAAATAATACCATTGTTAA-AGAGTGAAAATAAGA 56189
1 M A V P K K K S S V S R R - K I R N V H L K E Q M K N S I Q 29
56190 AACACCTCCATAGTT---AATCCTAATAAAGCTGCTGAA---AC-AATATAGGCCATGGGGATGGATTACTAAATGATATGATGTTTATT 56272
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
56273 ATTCATATT 56281
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 56300
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.32
56301 TTTATTATATCCGACAAATTTAGTAGATAAAAATACAATAAG---AATAATGCAATAATAAAAGAAAAATACTTAAAAACATAT---AAT 56384
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
56385 GTT---GTGTGTTTTAAAGAATATGAGGTAAAAAGTTCTAATCATTTAAAAGATAATTAGAGAAAATACAATCTCGAGATTGTATCGCTA 56471
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
56472 AATAAA 56477
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 56615
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
56616 ATAAGCAATCCTAAGAAAGCTGAATCGTTAAAAATAATAGAAATGAGAAGTTATGAATA-ATA---AAATTAAAGCTAATAATGCATGAT 56701
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
56702 AGCATTTGGTGTTAC---TGTATATATAATAATAAGAGAAAAAT-ATAAACTTAAAA---GCATATTCGAATAAAGAAAAGGTTATTATC 56784
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
56785 ---TTG 56787
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 56978
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
56979 GTCGGCATTTTAACACGGAAACACTTAATAAACGATGT-ACTTTACGTAGTTTAAATCTTGTCGAGTCATTTCAAAATAACTCTAATTTA 57067
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
57068 TTAGCAGCAAAAACCCATTT-ATCTATTGACCCTTTTCCTTTCCCATTCTAACTTGTAAAGGTTTTTTTGTAGAGGTAAGCATAGTTAGA 57156
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
57157 TCGAAT 57162
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 57757
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
57758 TTATTCAATCCGAGAAACGAACAATCAGTTACGATCATTAGGGATAAAAGTATTTTAGCCATCGTGAATATTAAATTTTCGCATATAGTT 57847
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S - I - 28
57848 ATATAAAATTATCGAGTTTGTAATAGTTT-CT-TATTATAGCGTAATAAATAGATTTAAATCT---TGTAAATATAAAAATAGTAAACTT 57932
29 Q - N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L 57
57933 TGTAATAAATTATTT 57947
58 I Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 59875
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
59876 TATTTAATTTAATAAAAGTTAAATTATTTATTTAGAAAGAGAATTATAAACAATATTATCAGGGAGTTTTTG---AACAGCTTTAAGAAA 59962
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
59963 ATAACGGTCAATTTGACTTACAATTATGATACAAAGAAATAGGCAAAGTATATAAGGTTGTTAAACGTCCTAAAAATAAGAACGTTCTTC 60052
31 Y S I C K N C N Y I K K K - H H I C S N C G Y Y N D S L I Y 59
60053 AAGAGGACT 60061
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 59994
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
59995 AAAGAAATAGGCAAAGTATATAAGGTTGTTAAACGTCCTAAAAATAAGAACGTT---CTTCAAGAGGACTTTGACCATATAACCTAAAAC 60081
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
60082 AAAACAATCAGCATAAAT---AAAAT-ATTAAGTTTAGCAATAAA---TGCTTATAAACAGACTACGGGTTAAAGGAC---ATCTATAAA 60161
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
60162 AGG--- 60164
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 60776
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 31 Length-adjusted: 0.50
60777 TACTACAATAAAGAAAAAAGAAGCACCATTAGCATGAGATATCGGATAAACCAACC-ATAAGGACATCTCTCATAAATGCT---CAACAC 60862
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
60863 TTAAAAAAGCTAAAATGCATTTGAGCAATAAAACATAACAAGAAAAATACCAGTAATAATTTGTATGCCAATACAACTAAGCATATATAC 60952
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S - L I Y 59
60953 CAAAGTTAT 60961
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 60834
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.18
60835 AAGGACATCTCTCATAAATGCTCAACACTTAAAAAAGCTAAAATGCA-TTTGAGCA-ATAAAACATAACAAGAAAAATACCAGTAATAAT 60922
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
60923 TTG---TATGCCAATACAACTAAGCATATATACCAAAGTTATATTATAATTCAAAGTTGC---AGGCTGGATAAGTTATGGCTGTATCAT 61006
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
61007 ---ATA 61009
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61160
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.23
61161 ATTTATATAAATATTAAAACACAAAACCAAAACTCAAACAAAAACCAAAAGTTAAATTTAAAACATGACTTTAAAGAAGATTTTGTAAAT 61250
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
61251 TC-TATTTAACTTCTGGTAAAAGTATGGTGCTGGTTTAGCAACAATGGATTAGCAGGTGC---TGGTACGGTGTTGGTATTGTTTTTGGT 61336
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
61337 TCT--- 61339
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61583
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
61584 ATTAAAGTAAATAATTTTAACGCTTT-ATAACAACAAAATCCGGAGAGTACTCCAAAAAAACACAAAAAATGAAAACCGATGAAAAAAAA 61672
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
61673 AACCAAAAAATAAAAAACACAAAAAAAATATTTTTAAATAAAAAATTTTT-TCCAATATTATTTTTTATAATAATATTAAAAATTTTATT 61761
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
61762 AATACG 61767
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61789
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
61790 TTAATTACATATTTAAAAATAATACCTATAAAATTTGATAAAATTTCTTTAATTTTTGATAATTTACAAAATATTAATCTTATT---AAT 61876
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
61877 TATGATTTTAATAAAAAAAACGAAAATATGATTTTATATCAATATGCTATAATTTTCCCTATGATTTATAAGGGAAATACAAAAAATTTT 61966
31 Y S I C - K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
61967 ATTTGTAAA 61975
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62107
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
62108 ATGATTATTTATGCATTCTGCGAACATTTTAAAAATGATAACTTATCTGATTTATTAGATGATCACAAAATTATTAATCGTATGCATGAT 62197
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
62198 TTT---ATTCATAAACAACCAACTCTTAGTTCAAGAGCATTTCAATTAGCATTGGAAGTTTCATATTCTAAACGTTCTTTTAACGAAGCT 62284
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
62285 ACTTTG 62290
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62203
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
62204 CATAAACAACCAACTCTTAGTTCAAGAGCATTTCAATTAGCATTGGAAGTTTCATATTCTAAACGTTCTTTT---AACGAAGCTACTTTG 62290
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
62291 CAAGATTTTTTCAAAAATGAATTTAACATTAGAGATACCTTTAATGTT---AATAAT---GGAGTATGTGATCAAAGCACTATTTTTTCA 62374
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
62375 GCACTA 62380
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62467
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
62468 TCTCCTGAAATAAAGGCCAGCATGGAATTTAATAAAAATTTAACAGGAAATTCGTGTCCTGATATTACTTTAAAAGAACATCCTTATGAT 62557
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
62558 TTTAAAGATTCAAAGGATATAAAATGGAATAAAAATCAGATTTATTTGGTTGATAATACTAGTTTTAATGAACAGGCTATAATAATGTTA 62647
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
62648 AATCAT 62653
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62596
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 366 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.24
62597 ATTTATTTGGTTGATAATACTAGTTTTAATGAACAGGCTATAATAATGTTAAATCATTTGGAAAAATCTTTGATTAATCAATTAACTGTT 62686
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q - 29
62687 AATCATTTGATGTCTAGTGAATGTGTTCTTTATACTAAAGATATTTTAGCAATTATGAAAAATAAAAGTACGAGCTCTGCTCAGGATATC 62776
30 N Y S I C K N C N - Y I K K K H H I C S N C G Y Y N D S L I 58
62777 TTTGAAAAAATA 62788
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 63
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
64 ATAAGTTTAATCAATAAAAAGGAA---TTAAGTAAAAGATATGTTATCATAATATTTCGGAAGAATCAGGTAATATATGGGACAAGGAGC 150
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
151 TATGT-ATAGCTTTTTGAACCTTATCTCTTAAGAAGGGATTCCATTCAGTCATTGAAGCAATAGCTTTTCTT---GTTTTAACATCTGTG 236
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
237 AGCGTT 242
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 900
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
901 ACAAATTTAGATATTCTTAGAAAAAGT---TCATAAAAAAATATCCAAGGTAATAT-TTGAAATATAGTAGTCAAAATAAAATCATTATT 986
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
987 TATAACATCATATAGAATACTAATAATTAATATAAAATAATGACCTTTTGTTAAAATATTATCTATGAAAATAGACATTTTCTTGTATTT 1076
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
1077 ATGAAA 1082
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 1052
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.23
1053 CTCGTTTTATATAATGTTCGTTTATATCTTGGTAAAAAGACATATCATGTGGTTCATCATCTATCATTAATGTTTCTTCGTTTATATATT 1142
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
1143 TTAATTTTTTACTATATATCAAATTATGTAATGCTTGATCATATGGTA---TCCAAATGTCATCTACA-AATTTAGATATTCTTAGAAAA 1228
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
1229 AGTTCA 1234
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 1724
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
1725 ATCCGTATAAGCATTAAAAAATTCTACTTTTATTTCAATAGGCTCCTCAACAGGTTCTTCAAAAGGTAAATCATTATTAATAACATCCGG 1814
1 M A V P K K K S S V S R R K I R N V H L K E - Q M K N S I Q 29
1815 TGGATTTACTATTGTAGGTGGTATTGTTTC---AGTTTCAATTTCAAATCTAGGGATAATTGTTTCACGTTTAAGATCAATATTAGGTCT 1901
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
1902 TCTAGGATA 1910
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 1918
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
1919 TTACTTTTTATAAAATATTCATGGACTGTATTTCGTATAATTGTTACAGATATATCTTCTGTTGAAACCCTTATTTTTTGTGTAACAAAT 2008
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
2009 ---TCAGTAATATCTAAATGTAACTGAAAAATTGCATCGTCACTATAAATACGAGAGCCTTCAAAACTTGGAGAAATTACACTATCTACA 2095
31 Y S I C K N C N - Y I K K K H H I C S N C G Y Y N D S L I Y 59
2096 TCTTCTATA 2104
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 2140
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
2141 TGGACAATCCCATCTAAGATATCAGGATTATCATAATAACAGTTAGAATCCACATTTTCTAAATTACTTAAAACTTCAACTATTAGGGAT 2230
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
2231 GTTGCAATTTGTTTCATTATAAAACTTTCGTTGTCAGCGGCAAAAAAACTATTGACAATTAGTTCCTTAAGTAATAAATTAATTAAATGA 2320
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
2321 TTAGTG 2326
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 3434
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
3435 TTAATAACACCTTCTGTA---TCTATAGTAACTGCCGAAGAATTAATGGATAACAATTTAAGATCATTAATAGATAATGTTTGTGATTTA 3521
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
3522 TTTAAAATTTC-AAGAGCACGTTCTATATTTGTTATTTCCATAACATAATCTTT---TG-GCAAGT---AACATTTAGCTGATTTTTCAT 3603
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
3604 TTTGTA 3609
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 3591
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
3592 GCAATAATTCCATTAGGATTAGAATCCATATTTTTAGCAATAAAAAAATTCCTTTCTTTTATACGTAATAATATTTCTTCTGTTTTTGGA 3681
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
3682 TATTCT---AATAAATATTTAAATCCT---AAGCTATCTTTATATTTAGTAAAAGACTGATACGCCTCTTGTGATATTTTAATAACACCT 3765
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
3766 TCTGTA 3771
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 4551
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.23
4552 ATTAAAATC---CAAAAGCGATATTCTGTTAATAAAGAATCAGGTAGTTCTCTAATAGTACGAGATCGAAT-AAA---TCTACTCCAAAT 4634
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
4635 TATCCA------AGA---TGTCATTATTAGACCTATAAATA-ATAATAAATAATAATATATTATTAAAAAATAATCAATTATTCTTTTCA 4714
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
4715 TCGATA 4720
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 4838
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
4839 GTATCTATCATTAAAATAGAAACTAAGATAATTCT-AGGAAATAT------CTGCATAAAAAAGACAAATACTTGTATCTGGTCATCATT 4921
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
4922 TATATTTTTTGTTTCAGT---AAAGTTATAAAATTTACTCACAAATTTGTAATA---ATA---AGGTTTAATATATTTATTATATTTAAT 5002
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
5003 AGCATG 5008
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 4838
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
4839 GTATCTATCATTAAAATAGAAACTAAGATAATTCT-AGGAAATAT------CTGCATAAAAAAGACAAATACTTGTATCTGGTCATCATT 4921
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
4922 TATATTTTTTGTTTCAGT---AAAGTTATAAAATTTACTCACAAATTTGTAATA---ATA---AGGTTTAATATATTTATTATATTTAAT 5002
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
5003 AGCATG 5008
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 5851
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
5852 TTCATAAAACCTTCATAATCTTTTTCATCTTTTGCAAGGTATTTAATATATAATTCTTCCAGCATTAAATTATCCATAAATGTTTCTACT 5941
1 M A V P K - K K S S V S R R K I R N - V H L K E Q M K N S I 28
5942 ATTTCCTTCATTGTTTGTGAATCTTC-AAGACAATCCAACTTTTCTAATATATTAAACAAACCTTCTTTAAGTATTTT---TCTAAAATT 6027
29 Q N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I 58
6028 TTCAAAGACTTC 6039
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 8002
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
8003 TACAGTATTTATAATAGATACCAAAACATTAAGTATAAATTGAGGTGGTACTTTAGGTTTAATAAGCCTAT-AAATTATATATATATAAC 8091
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
8092 TACTACATATT-ATA---ATTAACATTATTAAACGTAATAATGTTAAATCAAAAGGTATTTCTCGTGGTAATCTATTTCTTATATACCTA 8177
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
8178 CCCCAA 8183
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 8002
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
8003 TACAGTATTTATAATAGATACCAAAACATTAAGTATAAATTGAGGTGGTACTTTAGGTTTAATAAGCCTAT-AAATTATATATATATAAC 8091
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
8092 TACTACATATT-ATA---ATTAACATTATTAAACGTAATAATGTTAAATCAAAAGGTATTTCTCGTGGTAATCTATTTCTTATATACCTA 8177
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
8178 CCCCAA 8183
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 8469
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
8470 TATCTCATCAAAATAAGTAGGAATAAATGTTCTAAAAGAGATCTCCATATCATTAGGCG----GAATACATTCATCATCATCATCCTCAT 8555
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
8556 TATAATCAGGATGCCAAA---AATCTAATTCAGGAGGTAAGACATTTGGTTTATATGTTGTCCATACATTTTCAGAATTTTTTTCCCAAT 8642
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
8643 AATTTA 8648
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 9492
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
9493 AAGAGA---TCAGAAAATGGTTCAATATTATCTTGAAAGTTTTGTAGAAATATTTCTTCAATAAGTAATAAATGGAA-AGTGTGCAAACA 9578
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
9579 AATATTATCATGTTGAAGACTAATTTC---AATAGGACTATAAGGATTCTGTTTTATTGTAACATAAAAACTATCCTGCTCATTTATGTC 9665
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
9666 AAAATA 9671
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 9492
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
9493 AGTAAGAGATCAGAAAATGGTTCAATATTATCTTGAAAGTTTTGTAGAAATATTTCTTCAATAAGTAATAAATGGAA-AGTGTGCAAACA 9581
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
9582 AATATTATCATGTTGAAGACTAATTTC---AATAGGACTATAAGGATTCTGTTTTATTGTAACATAAAAACTATCCTGCTCATTTATGTC 9668
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
9669 AAAATA 9674
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 9855
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
9856 ATGGTTGCTCCAATATTAAGATTT---CTT---AAGGAAAAAATCAATCCTATT---GTAAATAAGTTTAATAAAAATAAA---TCTAAT 9933
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
9934 ATTTCCATTTTTATATCTTTGATATAT---AAATAATCTAATAGTTTAGAAAGCTCTTGTTTTTTATTAATTAGTAGTTTTTTATTTTTA 10020
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
10021 ---TTA 10023
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 9858
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
9859 ATGGTTGCTCCAATATTAAGATTT---CTT---AAGGAAAAAATCAATCCTATT---GTAAATAAGTTTAATAAAAATAAA---TCTAAT 9936
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
9937 ATTTCCATTTTTATATCTTTGATATAT---AAATAATCTAATAGTTTAGAAAGCTCTTGTTTTTTATTAATTAGTAGTTTTTTATTT--- 10020
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
10021 ---TTA 10023
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 11336
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
11337 ATTAATTCTCATTCTAAACATCGTTTTATGAAGAAAATCAAGTATTTTAATAAGAATATTACGTTATCTTGTGGACCATCAATAGATAAC 11426
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
11427 CATTCTATCATTTTT---TGTGTGAAGAAGGATCTGTTAATAACAATTTTAAAAAACCCATCATATCCATTCAAATTTTTGAC-TATTTA 11512
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
11513 AGAATT 11518
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 11411
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.35
11412 ATTATTTTAATTGTTAAAAATAACACTATAATTAAAATTAGAATGTTTAACATATTTAAATTTTTAAAAGGGAAAAAC---ATTAATTCT 11498
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
11499 CATTCTAAACATCGTTTTATGAAGAAAATCAAGTATTTTAATAAGAATATTACGTTATCTTGTGGACCATCAATAGATAACCA-TTCTAT 11587
31 Y S I C K N C N Y I K K - K H H I C S N C G Y Y N D S L I Y 59
11588 CATTTTTTG 11596
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 11949
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
11950 GTGATAATTTTGTAACAAAAGTATAATTATAAATCCAATCATATATATAATGATCATCATAATAATATTCATCAGGAATCGGTGTAAAAT 12039
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
12040 TACAT-ATACTATCAAAAAATAAATA-AATAGGTCCCCAAATATTTCTTATAGAATATGCTATTACAAAAAGTCGCATTTTGTCATTAAA 12127
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
12128 TTTATG 12133
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 12267
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 29 Length-adjusted: 0.47
12268 TTTGTTATTAGCAAATATAAAATATTGTACATTATAAAAATTTTTATTAAGCAAGCCATCAAACATAAAATCTTTTTTTTTCTCAAAAAT 12357
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
12358 ATAATATTTATATATTACATTAATTATGTAAGTAATAAAAAGCATATAATAAGTATAATACATATTAGTATGAATTATCTCATAAATAAT 12447
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
12448 AACTAT 12453
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 12291
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
12292 AGTACTTTTGTTATTAGCAAATATAAAATATTGTAC---ATTATAAAA---ATTTTTATTAAGCAAGCCATCAAACATAAAATCTTT--- 12372
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
12373 TTTTTTCTC---AAAAATATAATATTTATATATTACATTAATTATGTA---AGTAATAAAAAGCATATAATA---AGTATAATACATATT 12453
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
12454 AGTATG 12459
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 12645
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.39
12646 TTGAATTTTTTATTAAAGACATATTCTGTA---AAATCATCAATTTCAGCTGTA---TTA---GACAAAGTAAAAATTTTAGTTGCTGAA 12726
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
12727 TATAATATAAAAATTAATGGCAATAGAATAAAAAAAGAATATAT-ATTGTAATTAAGTATTTTTATTATTAT---AGA---ATATCTAAT 12809
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
12810 AACATC 12815
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 12648
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
12649 TTGAATTTTTTATTAAAGACATATTCTGTA---AAATCATCAATTTCAGCTGTA---TTA---GACAAAGTAAAAATTTTAGTTGCTGAA 12729
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
12730 TATAATATAAAAATTAATGGCAATAGAATAAAAAAAGAATATAT-ATTGTAATTAAGTATTTTTATTATTAT---AGA---ATATCTAAT 12812
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
12813 AAC--- 12815
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 13218
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
13219 ATGATATCTAATAATGTTTTTAATTGTGTTTCAGT-CATCTTATTAAGCAAACCTTTTTCATAAATAATTTTTACAGTAAGATAAATACC 13307
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
13308 TTCTACTTGATTAATTTTAAGGATAAAATTAATCTTTTGTACAAAAGATACTACAGTTTGGATAACACTTAATATTACAAT---ACTATT 13394
31 - Y S I - C K N - C N Y I K K K H H I C S N C G Y Y N D S L 57
13395 TCGCATAAAATAATA 13409
58 I Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 13523
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
13524 GTTATTATTTTAAAAGCCTTTTCGCATGCTTCTTTATCTAAATTAATACGTTCGTT-CTTATAAATAAAAGTGTTCACAATAGGATCGGT 13612
1 M A V P K K K S S V S R R K - I R N V H L K E Q M K N S I Q 29
13613 GGTAGTAATTGATGTGTTCTTAAGAGCTTTATAAATTTTAGTTACTATATCGTATGCTATTATTT-GGAATTTA----GACATGGTTATT 13697
30 N Y S I C K N C N Y I K K K H H I - C S N C G Y Y N D S L I 58
13698 TTCAGTTATGTA 13709
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 14141
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.40
14142 AGATCTTGGATTATTAGA---TCCAGC---AGTACTCGATTCTTTAAAAATGTTATGTTTTAT---CAAATATTCAATAAGATAAGAACC 14222
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
14223 TATTCTTACTGCAAAGGCGC-CTGTTTGTTCTAATA---AATCATCTG------GATTGTTTTCTTTATTCCAAAGCCATTTGAAAATTT 14302
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L - I Y 59
14303 TATCCGATT 14311
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 14141
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.40
14142 AGATCTTGGATTATTAGA---TCCAGC---AGTACTCGATTCTTTAAAAATGTTATGTTTTAT---CAAATATTCAATAAGATAAGAACC 14222
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
14223 TATTCTTACTGCAAAGGCGC-CTGTTTGTTCTAATA---AATCATCTG------GATTGTTTTCTTTATTCCAAAGCCATTTGAAAATTT 14302
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L - I Y 59
14303 TATCCGATT 14311
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 15591
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
15592 GAAATAGTAATTTCAGAATTAAATATTTTTTTACAAAGTAAATTAGAA---ATTTCTGCTAAATTCAATGCATATAAATCATTACGGTTT 15678
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
15679 ATGTCAAATTTAGCTAAATACTTAGAAGTTTCGTCAGATAATGCTTTTGTAATAAATAGCTGAAATTTTTCAAGGCAATTAATATTTAAG 15768
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
15769 TCAAAT 15774
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 16012
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
16013 ATATTTATAATATTTAGATAATATATCAGAAAATATGTGAATATAAGAAAGGTTTATATCAAATTTTCCTTTTTCAATTATTTTTTCAAT 16102
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
16103 GAGCGCATTTGAAATAGATTTACGACTACCTCCTATTGTCATTCCGTAAAGATCTGCCATTGTACTTTGTTTAATTATAATCCGATCCAT 16192
31 Y S I C K N C N Y I K K K H H I - C S N C G Y Y N D S L I Y 59
16193 GATATTTTC 16201
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 16616
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
16617 ATAAGGACTTGTAATGATACCATCCCAATAATTATCATCGTTAGGAGATTTATTAAGATCAAAGAGAAGCTGTGCAAATGT---GAGATA 16703
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
16704 ATGAGGATCTGTTGTATTGAGAATTTTAA-AAAGAGAAGGAAATAATTCATGAGTATAACAAGTTTTATAATTTAATTTTAACTGAATTT 16792
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
16793 TCAAAA 16798
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 17276
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.18
17277 TCTAAAGTACCTACAGAAACCCAAGAACCTAAATTAAAGCTTATATTTGAC---CATAAAAAAAACATGAATAAAAT-AATATAAACAAT 17362
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
17363 TATAA-GTGATAAAATGACATTGTAATAGC---AAAGCCGAGAC-AATTTGCTTCCCAGATGT---CTACCTAACATAAAAAGAATTATA 17444
31 Y S I C K - N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
17445 AATGCTATT 17453
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 18047
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
18048 TTA---CTAAATGAAATAAAGCAAAGTATAATTACCAATACCATAGCAAACATCATAAACCAAGTTGGCTACAGGTTGAAAATGCATAAT 18134
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
18135 AC-GTTTTATGTCATAT-TGTAATAACCTGTTAAAGAAGAAATATTAGCTGTATTAGGCCAATACAAGCTACAATAATGAA---ATATA- 18218
31 Y S I C K N C - N Y I K K K H H I C S N C G Y Y N D S L I Y 59
18219 AGGAGCATG 18227
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 18047
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.18
18048 TATTTACTAAATGAAATAAAGCAAAGTATAATTACCAATACCATAGCAAACATCATAAACCAAGTTGGCTACAGGTTGAAAATGCATAAT 18137
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
18138 AC-GTTTTATGTCATAT-TGTAATAACCTGTTAAAGAAGAAATATTAGCTGTATTAGGCCAATACAAGCTACAATAATGAA---ATATA- 18221
31 Y S I C K N C - N Y I K K K H H I C S N C G Y Y N D S L I Y 59
18222 AGGAGCATG 18230
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 18972
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
18973 TATGAAGTGATTTCGGTATTAAAA---ATATTAAGAGTACTAATAAAGAAAATTGCTATAAGAAAAGCGTATAAA---CC-ATAAAAAAT 19055
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
19056 TATAATGTAGCTCCGAGGACAAAGATTATGAAAAGAAAAGAACGATAATTATTAAGGTTGTTTCACATTAACAATACTTTCAAAAATAAT 19145
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
19146 TCAAGA 19151
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 18972
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
18973 TATGAAGTGATTTCGGTATTAAAA---ATATTAAGAGTACTAATAAAGAAAATTGCTATAAGAAAAGCGTATAAA---CC-ATAAAAAAT 19055
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
19056 TATAATGTAGCTCCGAGGACAAAGATTATGAAAAGAAAAGAACGATAATTATTAAGGTTGTTTCACATTAACAATACTTTCAAAAATAAT 19145
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
19146 TCAAGA 19151
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 19634
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
19635 ATAAGAATT---AAACATGGGTATTCTGTT---CT-AGGATTGTTAGGAGAATAATATTTCATGTTTTATTTTGTGATCAAACTAGAAAT 19717
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
19718 TATAATCTA---GGCAATTTTTTATACTTGTTAAAAGGTCATCATAA-TC-TCTAACCTAGTTATTAAATCTTTGTCATTTGTTTGCACA 19802
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
19803 AAAGGT 19808
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 20834
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
20835 AAAGTAATGCAAAAACTTTGGGTCCACATTTT-TATAAAAAGATAGAAAAT---CAAATGAGAACTAAA---AAACTAGTATTAGATACT 20917
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
20918 TCAGCAGCAAATAAACAATTAAAT---GTGAAAAGCCATCGATCGTTGATTTGAAATATAGGGTATGTTACCTTTTCAAATTGCTTTGAT 21004
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
21005 TATCAC 21010
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 20834
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
20835 AAAGTAATGCAAAAACTTTGGGTCCACATTTT-TATAAAAAGATAGAAAAT---CAAATGAGAACTAAA---AAACTAGTATTAGATACT 20917
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
20918 TCAGCAGCAAATAAACAATTAAAT---GTGAAAAGCCATCGATCGTTGATTTGAAATATAGGGTATGTTACCTTTTCAAATTGCTTTGAT 21004
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
21005 TATCAC 21010
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 21964
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
21965 TGCTTTATTTTTTTCTCACGATTTAAAATATCAAGACA-CGATTAGGATTTCCACACCATATTTACTACACGTTGATATCTATC---AAT 22050
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
22051 TTTTCT---AACCACATAAAATCTTTTTTTAAACGCATACATGATATCGAACACCTGGTAATCAGGTACACGACCTCCCCTATCATTACT 22137
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
22138 TCATTG 22143
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 22485
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.37
22486 TTAGCTATCCCTCATATGTAAAGAAGCACTATTTCACGTGCTAAG---AGTGAAGTAAAG---AAAGATCATTCTTATTATTTTTAAAAA 22569
1 M A V P K K - K S S V S R R K I R N V H L K E Q M K N S I Q 29
22570 CAGTTTTACGTAACCAATCAATT-GCC---ATAAAAATAGCACGGTTTTCACTATCGGTACAGGTAAATCATAACGACGTCCTGACTTAT 22655
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
22656 AGTTCTACG 22664
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 23130
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.29
23131 GTTGTTGTAAAATATAAGAAAAAATT-CCCACAGATAACAAACTAAGCAATATTAGCAGAACGGTTGGATCATATAGTGAATGCATACAA 23219
1 M A V P K K K S S V S R R K I R N V - H L K E Q M K N S I Q 29
23220 GAGCTTTATATTCAGAAGAATATTACGTTT---AAATCAATATATCGTATATACGTTTACTGTAATCACCACACG---TGGATGATTATT 23303
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
23304 TGTCCATTA 23312
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 23835
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
23836 TTTCTTTGTAAAAGCAAAGCACCAAGTTTA---AAACCTACCATTCTAGAAGTACATATATTCTTTTAATCTAGCACCAGTATAAACACT 23922
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
23923 ATTACTTTCCAACAAAAGGGTTTATAT---AGTACTAGATCGACTTTTTGTTTTATTACTGGTTT-ATGTTC---TCTTTAATATTTTCA 24005
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
24006 TCAAGA 24011
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 24240
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
24241 TTAAAAAAGTATAAAAGCGAACGTAAAATTAATCTTACCAAATGG---AAT---GACGTAAAAGGTAAC---AAGAATAGTACATTCCAC 24321
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
24322 CAAAATATTTT-GGTTCTTTAACCTAT---AAAATC---CATAATATAGTAAAAGAACTATATTACGTTATAGCGCACAAATTTTTCGAA 24404
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
24405 ATAATA 24410
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 25111
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
25112 ATAGCATCCAGTAAAAGACTAATTTCAGAAGTAGAAGAAGAAAGTTCCTGCTCAGATTTTGCCCATACAGTTTCAGGTAATTTTGTAGCC 25201
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
25202 ACAAAATTG---AGACATTGCTCATA-ATACTGAGGATGGCCAAGATA------AATTGTTGCTACAGTGTTTTTAAAATCCTCAAAAAA 25281
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
25282 GAATTG 25287
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 25111
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
25112 ATAGCATCCAGTAAAAGACTAATTTCAGAAGTAGAAGAAGAAAGTTCCTGCTCAGATTTTGCCCATACAGTTTCAGGTAATTTTGTAGCC 25201
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
25202 ACAAAATTG---AGACATTGCTCATA-ATACTGAGGATGGCCAAGATA------AATTGTTGCTACAGTGTTTTTAAAATCCTCAAAAAA 25281
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
25282 GAATTG 25287
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 26061
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
26062 AATTCCTTATGTCGTACTGATTTTAGTTATTTGAAACAGCTGGTATTTACATTTCATTACTACTTCATTGGTGTTAATCTTACTTCTTCC 26151
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
26152 CTATGCATTATTAGGTCTTGCAGGAATGCACGCCGTATTCC-AGATTA---TCCTGATGC---TATTTACATTTTAATTTAATAGTAGTT 26234
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
26235 ATGGTT 26240
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 28844
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.26
28845 GCTTTTATGCATTGCAAATCGTATCCTTTAAATGGGATTAATATAAAAAATTTTTAATGT---TTTAACATAAAGAATATTTTTCATAAA 28931
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
28932 AATGTTAAGTC-AAGGAA---AAGTATATGAAGAAAAGGTTATAATTATGCTATAAGTTTAAATATTTAAATTGCTCTCTAATTAATTTT 29017
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
29018 TTTATA 29023
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 29325
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.44
29326 TTGGATAAACCAAATAAAAAAAATAT-ATT---CGACAAAAACAATATTATTATTTTCTAATTTAAATCATGGTACATTCTAGAAATAGT 29411
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
29412 TGGACATTAATTCCTTCTTTTATCTATTTGCCATAGCTATTCCATATTTGCTCTTCTTTATTCTATGGAAGAGATTTTGAACCACAAATA 29501
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
29502 ACATTA 29507
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 30067
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
30068 GTTTACGACGACAATTATAGACATAATATTATTCAA---GAGATTCGAGTATTAGCAACTAAG---TCGATACAAAATAACTTTCATCAG 30151
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
30152 GGGATTCTTAATAAAGCAAAATTTGTTAATGTTATAAGATATCAGAAATAGAGCACGAAATTTTTCATAGGTGACTCTGTAATATCAAAG 30241
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
30242 GCCATC 30247
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 31920
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
31921 TTTAATTTAATAAAATTGCAAAATACGTTGGATAAATCTAAAAA-AAATACTACTACAGAAAAGATAGTAATAATAT-AGCAGGTATAGC 32008
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S - I Q 29
32009 AGGTATACTATAACAGAAGCATT-TTTTAAATAAAGGAGAAATATAACATTTTAACTAACGCAAATAATAAAAACTACTAATTAATGAAA 32097
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
32098 AAGCTAATA 32106
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32312
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.35
32313 ATCCAAGATCCGCTGTATTTAGACTCGATAAAACAATTGGATATTCATCTATCTACATTCTTGCATAATATGCGCAACCAATTCCGCAAT 32402
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
32403 GCGTATACAATCCATAAAAGTAATCTAAATCTGTTAAAGGTTAATCTAGAGCTTCAATGGAATACAACATATGAAGCTGCAATTGCTGCA 32492
31 - Y S I C K - N C N Y I K K K H H I C S N C G Y Y N D - S L 57
32493 CTCTTTGCCAAAATA 32507
58 I Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32565
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
32566 TTAAGTTCCTTTGAACAGAAAACAATATTATTTTTTATTCGCTTAAATGTAATTCATCACGCGACAGGATTGCTTTCAGATACTTCCAAG 32655
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
32656 TTAATATTTAATGAAAATATTACCAAATATCTCTCCAAAGGTATTCAACCAACAATTTATTGTGA-ACCGGTAATACAAGCATGGCTATC 32744
31 Y S I C K N - C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
32745 GTTTCCTTC 32753
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33070
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
33071 ATGTTTTTTCCAGAAGAATCAGATAGTTAT---AAAGTACCGTTATTTACCTCTGAACAAAAGAAGCAAGTAGAAGGTTATCTTTCTGAG 33157
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I - Q 29
33158 CATATAAACTTATTTGTAATTCAAGATTTTATTCTAAGT---CATTATCAAGTGCCTCCAACAACATTTACGGGTAATTTTCAAATATCC 33244
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
33245 AAACTTATT 33253
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33347
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.26
33348 ATGAGCGTGCAGAGTATGTCGACATCTATTTACCGTTGAAGGACTTCAAACATAAC-ATTAAAACCTATTTT---AATGAAATA---AAT 33430
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
33431 CATTT-ATATCATACATCATATCGCAAATTCAAATTAGCACCGGATTTATACGTTTCTGCAATAAACAATATAAGTCCAATGTTTTATCA 33519
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
33520 ACAGTG 33525
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33844
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.21
33845 TTATCACAACCGAAAAGGTATCAACTAGATTCCTTGCATGTAATACAAAAT---AAATTGAATCCACAGATACAAGAGCAACTGCTTGCG 33931
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
33932 TATACTAAAACG---AACCACGAGAAGTTACAAGAACTTTATAATCGT---CAGGTTATATCTCATGTGCATCCCGAGACTACACATACA 34015
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
34016 GCCTTA 34021
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33871
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.21
33872 AGAACCTCTCCGAATAAAAAAAGC---TTATCACAACCGAAAAGGTATCAACTAGATTCCTTGCATGTAATACAAAATAAATTGAATCCA 33958
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
33959 CAGATACAAGAGCAACTGCTTGCGTATACTAAAACGAACCACGAGAAGTTACAAGAA------CTTTATAATCGTCAGGTTATA---TCT 34039
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
34040 CATGTG 34045
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 34378
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
34379 GTGGATGTT---TTATCTGCGACTTCTTTAAT-AGGAGGGAGTCTTTAAAGATAGAT---AAGGCTTTATACTTTCAGATGTTACAGCAT 34461
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
34462 TATTCACAAGTATGCAGAATACCGAATTATGTATATTTGACGATGAC-CTA---TATGGG---GCAATATACAATTTACAGGTAATCTTA 34544
31 Y S - I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
34545 GAAAGTGAT 34553
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 35939
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
35940 TTAGCTTTGAAATTATATAATTT-CAAATTGTTCAAAGGATTATATAATTCATTTATTTAACCTTT---ATATTCGCTGTAATACGAGTT 36025
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
36026 ATATTGTGGATCCATAAT---AATTTAATAGTAAAATTAAACCATACTTGTATCAAGAGCAGCACTGAAAATAATATCATACTATATATT 36112
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
36113 TACCTA 36118
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37334
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
37335 CTCTTTTACAGTTTACGTCAAAATGATTTA---AAAAGGATTATT---GCTACTCATCTATTGCA-CATATG---AATTTTTTAGTGGGC 37414
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
37415 TAT---TTTTGTAAAAGATT-TATTA-GTTTAACAGGTTCTTTATTATTGCAAA---TGCTCATGGGTTTCTTCTTCCGCTTTATTTTTA 37496
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
37497 GCAATG 37502
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 39158
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
39159 GCGATGTACCCAAAGACATAAACGAATATAACCTTC---TCA---CGCAATTCTTTAGGTAAAGGCCAAATATTTTTGTTCCTCTTGGAA 39242
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
39243 CGCCTTTTTTGTAATAATGC-AACAGCAGGATATTGAAACCTTATCGTTGTCCATCT------ATCGTAAATGAGAATTTGCTATTCTAT 39325
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
39326 ACAAAT 39331
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 39819
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.29
39820 CGTGCTCTACCTGTTATAAGACATAATTTTTTAATT---GAACTTTCGAA-GTGTACGTAGGGCATAAAGCCAATATTAGTACTTGTAAT 39905
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
39906 TTCATAACTTGTAATAACGTCGTTCCATTTCTACGCTTTAAACTGCATACTTGTTTT---TTATCTTTTATT---GATTTTGTAATATGG 39989
31 Y S I C K N - C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
39990 AATCATTTA 39998
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 40329
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
40330 GAGGCAATATCATATAAAAATTTCAGCTATAGTTTGCCAGATAACCTATTTTTTTGGATTTTATTAGATCATTATATAAATTGTCTAAGA 40419
1 M A V P K K K S S V S - R R K I R N V H L K E Q M K N S I Q 29
40420 GGTTATAATAAGTCCTTTAGTTGTTGACAAATATATAATTTATTTTGTGCAAGATTTGATAAAGTTTATTATTTCGATAATACGGAAATT 40509
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
40510 AGAACGGTT 40518
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 40455
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
40456 TTTACCATAAATAAACTGTTTGGTTCTTTGTT-AAA---AAGCTTTTTAATAATAATTTTGTT---TACTTA---AATACCTTC---AAT 40532
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
40533 GCTATTATTTCATTAAATTGTAATAAAGATAAGAAGAGGCAATATCATATAAAAATTTCAGC-TATAGTTTGCCAGATAACCTATTTTTT 40621
31 Y S I C K N C N Y I K K K - H H I C S N C G Y Y N D S L I Y 59
40622 TGGATTTTA 40630
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 41026
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
41027 TCGTAAGTATTTTCCACACACAACGAATTTTCATATCTTTTGGTATTTTTTTCCAAATATCTAAACCAGTTGAAGGATAAATTCTTCTTT 41116
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
41117 AAAATTAAATGTAAATCTTGTTTGTACGGATGATTAAGTAAAAACTATTTAATCTGT---TGCTTTTATTTTACCAATAC-CTAGAATAT 41202
31 Y S I C K N C N Y I - K K K H H I C S N C G Y Y N D S L I Y 59
41203 TTGAAAACT 41211
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 41777
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
41778 ATGGTCTTTGTAAATAGGAAAACACTTTTTCTTGATACCCTATTAAGAAAAATCCTTACGTAAAGATGTCCTTTGAAATATAATCAGTTA 41867
1 M A V P K K K S S V S R R K I R N V H L - K E Q M K - N S I 28
41868 ATATTCGACGAAATCATTAGTAT-TGTTCTATTAGAAAAAAATATAC-CAAATAAATCGTAATTTCACGTTCAAGCCAAATGCTGATGGA 41955
29 Q N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I 58
41956 AATAAATCAATT 41967
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 42629
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
42630 ATGGCCTGTATAAAGAAATCTTCTAGTTTCTGTAAGTATAATTGTATAAAGGTTCTATATCTATAATGTCTTTTGAAGTCTGGAGTCATA 42719
1 M A V P K K K S S V S R R K - I R N V H L K E Q M K N S I Q 29
42720 TTCTATAAACGG---CGAACCTTTTTCTTTCTAGTAAGC---CATGTGATCTTCTTT---TTGGAATATCAAATATCGAACGTAATTTGT 42800
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
42801 CTTTCAACT 42809
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 43663
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
43664 CTATCTTTA---GAAAGAAAATCCTTTTTTTCTAGAACATCGTGCTGATGTTTATTTTTCCGTGCAAATTTTGTTGATAAATTAATCAAG 43750
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
43751 CTCGTTATTTCTAAAAACAAAACAATAAGTTATTTAGTACCTAAGATAGGAAAAAAAATTCTTTGTTACTCAAAAAATAATCTTAAAACA 43840
31 Y S I C K N - C - N Y I K K K H H I C S N C G Y Y N D S L I 58
43841 TATACCCAAATC 43852
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 43871
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
43872 AAAAAGACGTATAGAAGAAAATTTAAAATTAGAAGAAAAGTAGTCAATTCCAATATGCATTCAAGAAAAACCTAAAGTTCGTTTGGTAAA 43961
1 M A V P K K K S S V S R R K I - R N V H L K E Q M K N S I Q 29
43962 CCTTATGAATTTCGTGTTGATTT-CGTTTTTTAGCTAAATGTTACGTTTTTTT-TATAATTGCGTAAAACAAAAT---------ATCTTT 44040
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
44041 AAGAAAATT 44049
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44451
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.18
44452 ATGACTCAGGTAGAAAAACGAGTTACTCGACATCGTTTCTCTGTGCCTAATACAAAAGCGAAGGAGAATGATATTATCAAAAAATATTCG 44541
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
44542 TATAGATTTAGTATTTATCATAATTATGGTGTTTCTAATAATCAAATGATTGTTACTTTTCCTTCTATTTTTATTCAAGGA---ATTGAT 44628
31 Y S I C K N C N Y - I K K K H H I C S N C G Y Y N D S L I Y 59
44629 GCTCATATT 44637
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44499
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
44500 ATGGATGTTATCAAGATAAAGCTAAAATATTTATCCTGGGAAATGACTCAGGTAGAAAAACGAGTTACTCGACATCGTTTCTCTGTGCCT 44589
1 M A V P K K K S S V S R R K I R N V H L K - E Q M K N S I Q 29
44590 AATACAAAAGCGAAGGAGAAT---GATATTATCAAAAAATATTCGTATAGATTTAGT---ATT---TATCATAATTATGGTGTTTCTAAT 44670
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
44671 AATCAAATG 44679
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44785
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
44786 ATTGGCTATCCTATTAAACGCGACGCTTTG---TACAAAGCGTTTACTATAATACAT------GATTATATT---AATAATATTAGAGCA 44863
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
44864 TATGATAGTTTACCTTCTGAGTTATTTACGCGCAAACTTTTGAAAGGTGCTACAATGAAATTAGGTTATTCACAAGGTCAAGAGTTTCGG 44953
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
44954 GAGTTA 44959
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44896
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 34 Length-adjusted: 0.55
44897 TGGACAGCACCTACATTC---GATATTGTAACATATGAAACAATTAAG---TTACAGATATCTTCTGAATTACGGAAAACCATTATTAAT 44980
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
44981 TATCTTTTTTGTGTTAATAATTTAACATTAATTAGTATTGGCTATCCTATTAAACGCGACGCTTTGTACAAAGCGTTTACTATAATACAT 45070
31 Y S I C - K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
45071 GATTATATT 45079
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45037
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
45038 ATAAATTCCTTTATTTATAAAATTGAAATTCAACGTAAATTTTTAGAATCCTTCTTTTTAAAGATTTTAAATAAATCGTTAGTAGAGTTT 45127
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
45128 TTAAATCAAGAGAAATCT---GAAACTTTGGGATATGCTCTTTTTATATTGTGGACAGCACCTACATTC---GATATTGTAACATATGAA 45211
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
45212 ACAATT 45217
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45312
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
45313 AATATTACCACTATAGAACAATATATCCTAAGCTTTTGTAAA---GAAAATACAAATTTAACATAGTACCCAACAAATAATGTATTAAAT 45399
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
45400 ---AAATTATCATGGTTAAAATCACATGTAAAAAAAAAAATAAAAATATATTATAT-GCAAAAATCTTAATAGAAAGTTTAATAACTAAG 45485
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
45486 AATTTT 45491
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45546
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.35
45547 GCCAAATTAAAAGCTGCTAATCCTACACTGGATATCAGAAAATTTAAAATAATTCCTTTAACGATTTTGAAACGTTATTATCTTTCTGAT 45636
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
45637 AAATATAATTTTAAAGAAACAAAGTACTTAGCTCAACAACAGCAAGCATTTTGTTTGTTCGAGTATTACAA-AAACGGTTATATTATTAT 45725
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
45726 TCATTC 45731
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45722
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
45723 TTGATTATTAAACGCCCATCCACTTTCATATT-AAAAGGTGGGCTAGACATATCAAATATAAA---ATTCTGCATAATGGTTTC---GAT 45805
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
45806 CTT---GTTAGGAAAAATTTCAAA---ATAACACAAAAATTA---TTATTTCAAGAAATC---TTGTATAATGAAACAAAGTTTTTTGCC 45883
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
45884 AAATTA 45889
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47297
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
47298 AGTACCTTTAAAAAGAAGAGCTTAAGTTATTGCCTACAGCTAAAACGAAAAAGTTACTTACTTATTTTGATACTGATTTAGATTAATAAT 47387
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
47388 ATG---CTAGCG---TCT---AATTTTATTTTGTTTAAATTACATATTTTGCGAAACTTTAAGAGTTACAGTAT-TTGTTGTTATATATT 47467
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
47468 AATCTT 47473
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47586
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
47587 GCATCTGCCACTTTATATAAGCCTCATATTTCGAATCATATCTATCCTTCAGTTTATAAACAAAAGTGGGTGAACAATTCAAAATTAAGA 47676
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
47677 TTCAATTTG---AAAGACGG-AATATTCTAAATGCAGGACATACTAAAATAAAATCTACCCCATATTGGATA---ATCTTATTA---AAG 47756
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
47757 AGTATA 47762
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47722
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.31
47723 TTTGATAATCCTACTTACATATCTTCTAAGGAAAAGAAAATAAAACTTGAACTTAATTTGGGATTACAGATCCTTAATTGGTTGATAGAT 47812
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
47813 CTAAATATTCTTCAGGAAGAAATAGATAAGCGTAATGTTCCTCATATTACATTTTGGCATCTGCCACTTTATATAAGCCTCATATTTCGA 47902
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
47903 ATCATA 47908
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47930
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
47931 TCATCTATTCCTAAAAAAATATTGAGTTT-ACTAAGAATAAATTA---TCTTTG---GTAAAGGAATATTTA---TCAGCCTTGAAAGAT 48010
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
48011 AATAAAGATGAGACAGCATACAAAAGAATAATTCCACAAAATTGGAA-TGCAAAAACTCGTCAAGATAT---GATAAC---GTATTTGGA 48093
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
48094 CGTTTA 48099
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 48952
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 33 Length-adjusted: 0.53
48953 AGCCTCACCCCTAATCACAAGTCATCCCATTCTATGCAACAGAAAAGG---GTTCAT---CCTCCAAAAGTTGTTAACTCATTTCAATCT 49036
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
49037 CTCATGATTAGATCACTAGTTTCGGGTTTAAATGAAAAAACTCAAACGATTTAAAATTT-GCTTTCCTATGC---TATATAATATATAAG 49122
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
49123 CTTGCT 49128
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 50613
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
50614 TTCAGTCTCAGATGTGATGAGCCGACATCGAGTGCCAAACAATTCCGTCATAGGTACTCTAAGGAA---TTATCACCTGTTATCCCCGGA 50700
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
50701 TACCTTTTATT-CGT---TG-GCAATCCTACGCCCACAGGTTAAGATTGGATTACTAGGACCATTTAAAAATAAATCCCTGAATGAATTG 50785
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
50786 TCATTC 50791
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 50799
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.32
50800 TCAGCGATTAATAAAAGATTCGTAGCGAATAGCGTGCGCAAACAGCTCAAAAACCAGAGAATCGTTCCACCAGTCCTTTCTACTAGACAG 50889
1 M A V P K K K S S V S - R R K I R N V H L K E Q M K N S I Q 29
50890 AACAACTTTTACGTCTTATGAAATAGTAATAGGGACCGAACTGTCTCACACGTTCTAAACCCACTCACGTACCACTATTAATCGGTAACA 50979
30 - N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I 58
50980 ACCGAACCCTTG 50991
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 51718
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
51719 ATATATACTAACTACAGTCATTATAATCGTAAAAAAAGGGGTTTAAGACAACTTGCCTCTACTAGAAAGGCACGCTACAGAAGACACAGA 51808
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
51809 TA-AAAATCTCTTTTTACGGAAACTT-TTATTGCGCTTAAGTCGT---TGCTAGAATTATCACTATTTTATATATAAATTTGTTTATAAA 51893
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
51894 ACAATA 51899
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 52389
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
52390 TTCAATCGATATCGTAGTAGACCTTCAACAGAAAGAAGAAGGCTAACCAAATAAATGGCTAACGAAAAG---AAA---CCAATACAAAAA 52473
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
52474 TTG---GTA---AGGTTTTGCGCG---GTATTCGAATTAAACCACATCTCCACCCCTTGTATAAGTCACCGTCAATTCCTTTG-AGTTTA 52553
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
52554 ACCTTG 52559
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 52921
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
52922 ATCGTGTACAAAGCCAACAGAATGTCAAGCCTTATGAAAACTTTCAATAAGGTGGT-CTATCGAAACAATTGAAACCTTGTAACTTCTAC 53010
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
53011 TT-CAAATAGTT---TCCATAGCATACGGGCGGTCTGTACGTGACTTTTGTACTAATTC-ACCGTGCGTAATGATCCACAT---TACAAG 53092
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
53093 AGATTC 53098
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 53336
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
53337 GACAAGATTTGAACTCGCAACCTTTCGGTCCCAAACCGAATGCTCTACCAGTTAGCTACGCTCCGAGATTTTTAAAATTTAAATTGGCTC 53426
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
53427 CACAGGACTTGC---ACCTGCACTCTGTCGATTAAAAGCCATAGCATTACTAT-TTATGCTACGAGCCAAATAAAAGTCATATAGAATTG 53512
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
53513 TCGGGG 53518
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 53906
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
53907 ATCATCACCAAAAATAATACAACCACTTGTTCAGCTTCTAGATTAAGAGCCATACCGTTAAACCCTTAGAATAAATTCTACCATTTCACC 53996
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
53997 TACTTGAATATTATCAA-TCCTGTAAC------AAAAG-CAACACCATCTTTACAGAAAT---AATTTGACCATTGACGGGTCTTCATTT 54075
31 Y - S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
54076 TCATCAATG 54084
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 54030
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
54031 ---GATATTCCTCAAAAGCATAGTTTCACCACCATCGATAAATTACCAATACCATCACAACACGACCTAATAAGCCATAACCTACAGGGT 54117
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
54118 TTTGACTAAGTATTTAAAGCACGACAGAATCATCTTGTTGAACAGAGTATCATCACCAAAAATAATACAACCACTTGTTCAGCTTCTAGA 54207
31 Y S - I C K - N C N Y I K K K H H I C S N C G Y Y N D S L I 58
54208 TTAAGAGCCATA 54219
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 54485
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
54486 ATAAAGATAATTGTCATAAGCAGCAGCATGTTTTGTTAAATCATCATAAATAATTAAGCATGTTCACCTTATCACGATAAAATTCAGCAA 54575
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
54576 TGCACATCCTGTATATGGAGCAATAAACTGAAGAGAGGCACT---TTGTGCAGCGT-TGCAGCAAC---AATAGTAGTATAATGAGCGCT 54658
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
54659 TTATTA 54664
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 54529
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
54530 AAAAACATCACCTGGAAAGCTTCACGTCCTGGTGGGCGTCTTAATATAAAGATAAT-TGTCATAAGCAGCAGCATGTTTTGTTAAATCAT 54618
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
54619 CATAA-ATAATTAAGCATGTTCACCTTATCACGATAAAATTCAGCAA-TGCACATCCTGT---ATATGGAGCAATAAACTGAAGAGAGGC 54703
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
54704 ACTTTG 54709
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 54965
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
54966 TTAAAAGCACCAGCTAAATAATTAAAACTTGTTTAT---ATAATT---GCATTGCATATTAGGACCTTGTTTAAGAATTTCAGTTA-ATA 55048
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N - S I Q 29
55049 AACACCTCTATTAAGAATTCCTCTTGTAACATCATCATATCATTATCAAAT---TGTGCAAAACAGAATATTCACGATATTAGCAAGTTG 55135
30 N Y S I - C K N C N Y I K K K H H I C S N C G Y Y N D S L I 58
55136 ATAACGAAGATT 55147
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 55136
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.37
55137 ATGGATTTCAGCAAATCCAAAAT-CGGCTTTATCAAAGAATGATA---AATATTCATAGAATGATAGAATAATTCAGCTCGTTCAGG--- 55219
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
55220 TTTATCATGTGTAAACTTAATAGTTTAGTTTCATATAAAGCACAATATTGCTCAAATCTTTTTTAAAATCTTTATAAAAGGAGTAATAAA 55309
31 Y S I C K N C N Y I K K K H H I C S N - C - G Y Y N D S L I 58
55310 ATTAAAAGCACC 55321
59 Y K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 55611
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
55612 TTAGCTTTAGTTTTTACTGTATTCAAATGTATGAGTATGTCATGC---TCCTTTTCTATTTCTGATGGAATTTATGGTTCAGTTTTTATA 55698
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
55699 TGTTAACAGGTTTT-CATGGAATTCATGTTCTTATGGTACTATCTTTATTGTGTTCAATTTGTTCGTCTTACAAAGATCATTTATTATCT 55787
31 Y - S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
55788 AAAGTCATT 55796
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 56862
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
56863 TCGACAAGATTTAAACTACGTAA-AGTACATCGTTTATTAAGTGTTTCCGTGTTAAAATGCCGACAAAACTAAAAATAATTATCATCGAT 56951
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
56952 TACATACTCGT-AGAGAAACTAATTTTGTATCCAAA---TATAT-ATAATATTAAAATTTTTAATTATTAACTTATATATTATATTTCAA 57036
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
57037 TCAAAA 57042
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 57467
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.24
57468 ATTGAGGTTTCAGATTTATATTTCAGGTCGTTTAACCGTAAAGAACGTGCAGCATATATGTTAAAGCATATAAAGTATGCCTTT---AGC 57554
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
57555 TACAGCTAAAATAGA---GTGGATTATGCTTCTGATTCAAAA---TTATGCGTTTGGTGTCGTTGGTATTAAAATTTATTTATTACATCT 57638
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y - N D S L I Y 59
57639 GAAGATGTT 57647
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 57476
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
57477 ATTGAGGTTTCAGATTTATATTTCAGGTCGTTTAACCGTAAAGAACGTGCAGCATATATGTTAAAGCATATAAAGTATGCCTTT---AGC 57563
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
57564 TACAGCTAAAATAGA---GTGGATTATGCTTCTGATTCAAAA---TTATGCGTTTGGTGTCGTTGGTATTAAAAT---TTATTTATTACA 57644
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
57645 TCT--- 57647
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 58224
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
58225 ATGTATTTACCTAATCCTGAAAATATTCTAGAAAAGATATATTTGGA-AACGTTAAAATGGTTCTATTATTTGGGTTTAGATCGCAAGGT 58313
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
58314 ATTAAAGTTAATAATTTATTAAAGATTTAATATAAAAATAAAAGAATCTTGTCTAAGCTT---TTTGTTGAAAATGTCTTAATATA-AAA 58399
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
58400 ACTATC 58405
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 58573
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
58574 ATGGCAATATCAATTAAGAGATCCTTTATAGCCAATGTTTTTATTTATAA-GA-AGTGAAAAAAATGTTTTAAAATATTCAGCACTTATG 58661
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
58662 TTTCTTATACATAAGAAG---AAATATTAATCTAGAAAATTAGAACTTGAAAAGATAAAATTAAACCTATCGAAATCCTTTTATGCGAGA 58748
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
58749 TCTTTA 58754
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59480
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 31 Length-adjusted: 0.50
59481 CATTATTTTAAAGCAAATAAAATAAAACCATTTAAAAAGGAAATAAGAAACTTGGAACCATCCTCCAAGAAAAAGAATAGTTGTGTAAAC 59570
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
59571 GACCAAATATTAAATTACATATTCTGCAATAAAATAAAAAGCAAAGGACCACTAGAATATTCACACTATAACCTGCAACAAGTTCACTTC 59660
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
59661 AGCTTC 59666
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59621
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
59622 ATTAGTATAAAAATTAAAAAAAGCATAAACAAAAAAACACCCTAACAAAACATTGGTAAAAAGGCTCTCCAGCTAATGTCATTAATTGGT 59711
1 M A V P K K K S S V S R R K I R N V H L K E - Q M K N S I Q 29
59712 CCCAACGATATCTCGGAGTGCTGCTCTAATCAACAAAATAAAGCTAGGATAAACATTATTTT-AAAGCAAATAAAATAAAACCATTTAAA 59800
30 N Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y 59
59801 AAGGAAATA 59809
60 K S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 61324
Protein: lcl|KC353356.1_cdsid_AGH24303.1 [gene=rpl32] [protein=ribosomal protein L32] [protein_id=AGH24303.1] [location=47762..47950] @ 0
DNA length: 372 Protein length: 62
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.15
61325 TTATCATTACCATGTGTACTTTCATAATGCTTATCCAAAAAGAATCAAAAAAGCCATCATCAAAGCCAAAAGGCCAC-AGCTTC---AGT 61410
1 M A V P K K K S S V S R R K I R N V H L K E Q M K N S I Q N 30
61411 TACAGCAAACCCAAGCATGCA---TACTTAAATAAGCGTTGTTCT---TCTGCCGATTACGGCTTA---AACCAAAAACTAAGAACCAAA 61491
31 Y S I C K N C N Y I K K K H H I C S N C G Y Y N D S L I Y K 60
61492 AACAAT 61497
61 S I 62
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 319
Protein: lcl|KC353356.1_cdsid_AGH24304.1 [gene=rpoD] [protein=sigma-like factor] [protein_id=AGH24304.1] [location=complement(48495..50090)] @ 0
DNA length: 3186 Protein length: 531
1 Nt shifts: 5 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.01
320 TTATATACATATGTTATAAATATCCTCGTACC-AATATATTAATTAAGGAAGATTTATTCGAATATGCTTTAAAAACAACTAAAGAAAAA 408
1 M Y E N I T K K I L H N I L - K H K I K E K I K K K S K K Q 29
409 ATGATAAATATATGTATCATAACGTTATATATATTTACTTTTGTTATAGGTATATTTTATCTTAGATATATAAATATAACAAAAAAAGTA 498
30 S L Y K K K V V K N K K K N V L Y A N E L R R I K I Y K K Y 59
499 GACTTAAAAATTTATTATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAAGAAGAAAT-TATTTTAAATGTGGTAATAATAATAAC 587
60 K - K V Y K - K L E S L L - Y F E Y Y E Y Y Y K K I N D D L 86
588 TTTTATAATAATTTATATTTTTATAATAT-ATAAATTTACTCAATATTTTAAATTACAA-GTAATTAAAAGACATCTTTACTTAATAGGA 675
87 M L D K D D F - N S I K K E K E L F Y N F D K A Q M I I I K 115
676 ATACCATTAAATAATAATTGGTATTCAACCGTTCATCGAAAGTATTTATGGCCTTTAGCAAATTCTTTTCTTAAAATAAGTATAAAACAT 765
116 I L F E N R L S Q P V F F P L S K D I K K L Y K N P N I L S 145
766 AAAATTGAGTTATTGTATAAAAAATAT------TATTTTGATAAAAAGCCTCAT---AAACCAAGACCTGATAATTTTTTTTCTTTATCT 846
146 K F N L D I K K L E K M F L I S N Y I R I K D I R I H N L L 175
847 GAAGAGGCAAAAATTTTATTTTTTAAAAATAATCCTACATTACCTGAATTACTTTTTCATAAATACAAGAAAATGTCTATT---TTCATA 933
176 K N S K I N F F K T L P H E N I H Y N T S N I Q T P I N L L 205
934 GATAATATTTTAACAAAAGGTCATTATTTTATATTAATTATTAGTATTCTATATGATGTTATAAATAATGATTTTATTTTGACTACT--- 1020
206 K E Y L Q I L K I I K T V A N I I E K I S F H K S L L S I Y 235
1021 ATATTTCAAATATTACCTTGGATATTTTTTTATGAACTTTTTCTA---AGAATATCTAAATTTGTAGATGACATTTGGATACCATATGAT 1107
236 L Y K F Y Q E L K W N Y I F I N K I S R N I D K I F L K T L 265
1108 CAAGCATTACATAATTTGATATAT------AGTAAA------AAATTAAAATATATAAACGAAGAAACATTAATGATAGATGATGAACCA 1185
266 K N T F N T F Y L L S K F T K Y Q Y Y Q K K Y K K K K D S I 295
1186 CATGATATGTCTTTTTACCAAGATATA---AACGAACATTATATA------AAACGAGGTTTTGTTAAAGATCCAAATAATATATAG--- 1263
296 Y K K Q Y I H T I L K E H Q I L N K K E I N K N I K F V L I 325
1264 AATAA-ATGAAAAATATAATAAATAAAATACGATATATATATATTATACTATTACTTAAATTA---TTATATAATCCTATAATATTTTTT 1349
326 N T I R S I Y N T L L T S I L R E N I K I T L K N R I L F N 355
1350 CTGATATATTATGTAATAATAATAGGTATACAAATATTATGGTCA---TATTATATGCATGTA---GAAGTTATCAAAGATAATGATAAT 1433
356 Y M P Y V T I I S K Q Y I K T G Y K A E L S D L I Q E G I S 385
1434 AATTTATTAAAAACATTGCCTTCAATAAAGATTATTCATAATTAT---TTTCTG---TATAAAAGTAGTTATTTATATGAA---GCTGGT 1514
386 G V S D A A D R F Q L G R G V R F L T Y A Y W W M H N Y M M 415
1515 TCAATATGTAAATCTTTATATAAAATAATGCCGACAACTAAATATTCGGTAGTTAAAGATATTATTTTGGTGAAATAT---AGTTTAGAT 1601
416 K T T I K K K K I I N I N N N E T P K K E L L L K I E K L Q 445
1602 ACTTCAGCTGATTATCAACCTTCTCAAGATGAAGCCTCATATTTCCCTTCTGATGATATTAATGATATGATACCAGTACAAATGCAAGAT 1691
446 T E I K K N I K K K D N S L Y K F D K I I R E E T K K L Q E 475
1692 ATACCTGTTAAA---TCCAAAGAGCCTAAAATAGAATATCCTAGAAGACCTAATATTGATCTTAAACGTGAAACAATTATCCCTAGATTT 1778
476 I K K K L N R K E L I L Y Y L S S G I P P Y K I H T L E Q L 505
1779 GAAATTGAAACTGAAACAATACCACCTACAATAGTAAATCCACCG---GATGTTATTAATAATGATTTACCTTTTGAAGAA 1856
506 A V - L F S V P H T T I Q T T L K K I K K K I G F Q N 531
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2825
Protein: lcl|KC353356.1_cdsid_AGH24304.1 [gene=rpoD] [protein=sigma-like factor] [protein_id=AGH24304.1] [location=complement(48495..50090)] @ 0
DNA length: 3186 Protein length: 531
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.03
2826 TTACAGCCGTTTATGATACAAAACAAGGATCATCCGATATTCAATAT-AATTTA---GAAAAAATAATTAAA---GATTTGAAAATAGCT 2908
1 M Y E N I T K K I L H N I L K H K I K E K I K K K S K K Q S 30
2909 ATACAGGAAAAATCTTTGAATAAAGAACAAGTAAAAAGCATTATT------GATGATATTCGTAAAAATTATGTTACTAAAGGGGTTAGT 2992
31 L Y K K K V V K N K K K N V L Y A N E L R R I K I Y K K Y K 60
2993 ---ATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAGTCTTATGATTTTCAATATGAACCTTTAAAACAAATTTGTAAAATTAAAAAA 3079
61 K V Y K K L E S L L Y F E Y Y E Y Y Y K K I N D D L M L D K 90
3080 GAT---ATTATT---ATAAATAAAGAACAAGAAAAAATTGTT---ATAGATTCTAAATCATCTTATGAAGAAAAA---TTG---AAAAAT 3154
91 D D F N S I K K E K E L F Y N F D K A Q M I I I K I L F E N 120
3155 ---TTAGAAGAAAAAATGTCAATAGCTCTTAAAAATATAAATAATTTTCTTGAAAAAAATAAAGATTATACTAAAGAATTT---CTTGAA 3238
121 R L S Q P V F F P L S K D I K K L Y K N P N I L S K F N L D 150
3239 GCAAAAGAATTACAAGAATGGTAT---------GATTATTTTCAGAATAGAGGAGCA---TTAAAAAAATTATCAAAACAAGAAAAAGAA 3316
151 I K K L E K M F L I S N Y I R I K D I R I H N L L K N S K I 180
3317 GTTTATGATAAATTATTAGAAATAAAAAAT---AAATATTTACCTAGCGAAAAAGATTTTCAA---GAAAAAAATAGTAGTTATTTGACA 3400
181 N F F K T L P H E N I H Y N T S N I Q T P I N L L K E Y L Q 210
3401 CCTCTGAAAAAAAATAGTGCTTTACCTATTAATTTACAAAATGAAAAATCAGCTAAATGTTACTTGCCAAAAGATTATGTTATGGAAATA 3490
211 I L K I I K T V - A N I I E K I S F H K S L L S I Y L Y K F 239
3491 ACAAATATAGAACGTGCTCTTGAAATTTTAAATAAATCACAAACATTATCTATTAATGATCTTAAATTGTTATCCATTAATTCTTCGGCA 3580
240 Y Q E L K W N Y I F I N K I S R N I D K I F L K T L K N T F 269
3581 GTTACTATAGATACAGAAGGTGTTATTAAAATATCACAAGAGGCGTATCAGTCTTTTACTAAATATAAAGATAGCTTAGGATTTAAA--- 3667
270 N T F Y L L S K F T K Y Q Y Y Q K K Y K K K K D S I Y K K Q 299
3668 TATTTATTAGAATATCCAAAAACAGAAGAAATATTATTACGTATAAAA---GAAAGGAATTTT---TTTATTGCTAAAAATATGGATTCT 3751
300 Y I H T I L K E H Q I L N K K E I N K N I K F V L I N T I R 329
3752 AATCCTAATGGAATTATTGCTTTAGCTCACCTATCACATAATACATTAATT---ATTCCAAACCAAACCGAGAAAAATTTATATGTTAGG 3838
330 S I Y N T L L T S I L R E N I K I T L K N R I L F N Y M P Y 359
3839 GTAGGGCTTGTTACTAGTACTAAAAGTGATTCTAATATTAAAATTGATAGTTATCAAGTTACTAATGAGGAT---TCTAATAAACAAAAT 3925
360 V T I I S K Q Y I K T G Y K A E L S D L I Q E G I S G V S D 389
3926 AAA---GAT------CAAATGTTTCGT---ATT---TTTCCTACTTTTTTAATT------GTAGATGAGAAAATTGAGCCCTTAATAGTA 3994
390 A A D R F Q L G R G V R F L T Y A Y W W M H N Y M M K T T I 419
3995 AATCTTGAAATGACGTTGTATTTTTATGGCAAAAATACAGATAATAAAAGTATTGTAGAAGAAATCATATTTACGCAATATGATTTAACA 4084
420 K K K K I I N I N N N E T P K K E L L L K I E K L Q T E I K 449
4085 AAAAATATATGGTCCGAAAATTATTACCAATATCCTTTTAAT---GTGGATCAAGAATTTTTACGTCAACTTTCTATTATTTTTTATAGT 4171
450 K N I K K K D N S L Y K F D K I I R E E T K K L Q E I K K K 479
4172 AATAAATTACAAGAACTTCAACAGGATTATAAAGAACTACAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAAGACTATAATAAG 4261
480 L N R K E L I L - Y - Y L S S G I P P Y K I H T L E Q L A V 507
4262 GAAATAGATCGCCTTAATGAATTAAAAACAAATTATTTGAAAGATAGAAAATATAAACAATATTTTAATTCA 4333
508 L F S V P H T T I Q T T L K K I K K K I G F Q N 531
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14347
Protein: lcl|KC353356.1_cdsid_AGH24304.1 [gene=rpoD] [protein=sigma-like factor] [protein_id=AGH24304.1] [location=complement(48495..50090)] @ 0
DNA length: 3186 Protein length: 531
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.02
14348 ACATCTAATCTTTTTGTTAAACCAATTTTATACCCAGAAATGTCTTATGAATTTGAATCTAAAATCGAGCGCAAAAGTTTTTCATTTAAA 14437
1 M Y E N I T K K I L H N I L K H K I K E K I K K K S K K Q S 30
14438 CTATTAAAGAAACAAGAG---CAGGCTAAAATACCAAAATTCACTTAT---AAAAAAACATCTAAATTAAATACAATATTAAATACAAAT 14521
31 L Y K K K V V K N K K K N V L Y A N E L R R I K I Y K K Y K 60
14522 GATGTT---AAATATTGTATAAATAAACCTTTTTTTAATTTTTATATAGATTATTTAAAAGAAATTGAACAAATACTTTTATTAAACTAG 14608
61 K V Y K K L E S L L Y F E Y Y E Y Y Y K K I N D D L M L D - 89
14609 TATTAACACAGATTCTGAGGAGCAAAATTGATATCAGATTTTATTTAT---GTAACATAT---CATTTTGACATAAATAATCTTTTATCT 14692
90 K - D D F N S I K K E K E L F Y N F D K A Q M I I I K I L F 118
14693 AATTGTAATATAAATCATGTAAAAGATTTTCTAGTATTTATAGGTAATCATAACAAATTATTTGATAAT---CACTTATGCAAAAAACTA 14779
119 E N R L S Q - P V F F P L S K D I K K L Y K N P N I L S K F 147
14780 ATTCTTACA---AAAAAA---CAATATTTATCTAAATATTCAAAACTAATGGAA---AAGGGTTTAGAAAATAAACTCCATAAAAAAACT 14860
148 N L D I K K L E K M F L I S N Y I R I K D I R I H N L L K N 177
14861 AGTAGTATTCATACTCTTGATCAATACATTCAACATGATTTGAATAAAAATGAACAGAGTACTAAAGACTTAGCTATTTTAGCTAAAGAG 14950
178 S K I N F F K T L P H E N I H Y N T S N I Q T P I N L L K E 207
14951 ATAAATGCTGCTAAACTACTTTTAAATTGCTATTATAAAGTAGTTGCTCAA---AAATTTTATAATGCTCATTTT---ATAAAAGATGCC 15034
208 Y L Q I L K I I K T V A N I I E K I S F H K S L L S I Y L Y 237
15035 ATAATTTATCAACATTTTGAATATTTTTATCTTCCAATA---GAAATAAGC---GGTGTTGGTCGCATACTAACAGTGTCACATATTTTA 15118
238 K F Y Q E L K W N Y I F I N K I S R N I D K I F L K T L K N 267
15119 AGTTTTCAAACTAACAAGTTTGCAAGACCATTTCTTAATTAT---TTCATAAAAAATAAAATTACTATGGATTTCGAA---ATATATGAT 15202
268 T F N T F Y L L S K F T K Y Q Y Y Q K K Y K K K K D S I Y K 297
15203 AAA------ATGAAAGCACTTTTTGCAAATTATCTTTCAGCAGATTCTACATTACAAAATATGAGCTTTGATTTATTTGAAAAACAAACT 15286
298 K Q Y I H T I L K E H Q I L N K K E I N K N I K F V L I N T 327
15287 ---AAAGATTTACAGGATGAACATTTAGCAAGCTTTTTCAATAAAAGTACACCATTA---ATACAACATAGCTTAAGTTTTGATTATTTA 15370
328 I R S I Y N T L L T S I L R E N I K I T L K N R I L F N Y M 357
15371 TCTAAAATGATACACATAATTAAAAATTATGCTAAAAAA------CCTGGGGAGATATTAAATATTCTTAGT------ATTTTATATTAT 15448
358 P Y V T I I S K Q Y I K T G Y K A E L S D L I Q E G I S G V 387
15449 AAAGAAAAAAATGCTTTATATAACAATAGTGAACTTGTTATATTTTTAGATAGTACAATGAGCGGGTCTCAACATTTAGCAACAATATTT 15538
388 S D A A D R F Q L G R G V R F L - T Y A Y W W M H - N Y M M 415
15539 AAAAATAAATTAGCAGCTAAAAATAGTTGTTTAATTTCTACAGATGAAACTAAATTTGACTTAAATATTAATTGCCTTGAAAAATTTCAG 15628
416 K T T I K K K K I I N I N N N E T P K K E L L L K I E K L Q 445
15629 CTATTTATTACAAAAGCATTATCTGACGAAACTTCTAAGTATTTAGCTAAATTTGAC---ATAAACCGTAATGATTTATATGCATTGAAT 15715
446 T E I K K N I K K K D N S - L Y K F D K I I R E E T K K L Q 474
15716 ---TTAGCAGAAATTTCTAATTTACTTTGTAAAAAAATATTTAATTCTGAAATTACTATTTCATGTTTAAAGTCATAT---TTAAAAAAA 15799
475 E I K K K L N R K E L I L Y Y L S S G I P P Y K I H T L E Q 504
15800 ATGGCTTTTAAATATGAAGTGACTCCTTGTGCAATTTCCGATACTTATTCT---TTTCCTGATTCTTTT---ATGCAAGAA 15874
505 L A V L F S V P H T T I Q T T L K K I K K K I G F Q N 531
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14347
Protein: lcl|KC353356.1_cdsid_AGH24304.1 [gene=rpoD] [protein=sigma-like factor] [protein_id=AGH24304.1] [location=complement(48495..50090)] @ 0
DNA length: 3186 Protein length: 531
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.02
14348 ACATCTAATCTTTTTGTTAAACCAATTTTATACCCAGAAATGTCTTATGAATTTGAATCTAAAATCGAGCGCAAAAGTTTTTCATTTAAA 14437
1 M Y E N I T K K I L H N I L K H K I K E K I K K K S K K Q S 30
14438 CTATTAAAGAAACAAGAG---CAGGCTAAAATACCAAAATTCACTTAT---AAAAAAACATCTAAATTAAATACAATATTAAATACAAAT 14521
31 L Y K K K V V K N K K K N V L Y A N E L R R I K I Y K K Y K 60
14522 GATGTT---AAATATTGTATAAATAAACCTTTTTTTAATTTTTATATAGATTATTTAAAAGAAATTGAACAAATACTTTTATTAAACTAG 14608
61 K V Y K K L E S L L Y F E Y Y E Y Y Y K K I N D D L M L D - 89
14609 TATTAACACAGATTCTGAGGAGCAAAATTGATATCAGATTTTATTTAT---GTAACATAT---CATTTTGACATAAATAATCTTTTATCT 14692
90 K - D D F N S I K K E K E L F Y N F D K A Q M I I I K I L F 118
14693 AATTGTAATATAAATCATGTAAAAGATTTTCTAGTATTTATAGGTAATCATAACAAATTATTTGATAAT---CACTTATGCAAAAAACTA 14779
119 E N R L S Q - P V F F P L S K D I K K L Y K N P N I L S K F 147
14780 ATTCTTACA---AAAAAA---CAATATTTATCTAAATATTCAAAACTAATGGAA---AAGGGTTTAGAAAATAAACTCCATAAAAAAACT 14860
148 N L D I K K L E K M F L I S N Y I R I K D I R I H N L L K N 177
14861 AGTAGTATTCATACTCTTGATCAATACATTCAACATGATTTGAATAAAAATGAACAGAGTACTAAAGACTTAGCTATTTTAGCTAAAGAG 14950
178 S K I N F F K T L P H E N I H Y N T S N I Q T P I N L L K E 207
14951 ATAAATGCTGCTAAACTACTTTTAAATTGCTATTATAAAGTAGTTGCTCAA---AAATTTTATAATGCTCATTTT---ATAAAAGATGCC 15034
208 Y L Q I L K I I K T V A N I I E K I S F H K S L L S I Y L Y 237
15035 ATAATTTATCAACATTTTGAATATTTTTATCTTCCAATA---GAAATAAGC---GGTGTTGGTCGCATACTAACAGTGTCACATATTTTA 15118
238 K F Y Q E L K W N Y I F I N K I S R N I D K I F L K T L K N 267
15119 AGTTTTCAAACTAACAAGTTTGCAAGACCATTTCTTAATTAT---TTCATAAAAAATAAAATTACTATGGATTTCGAA---ATATATGAT 15202
268 T F N T F Y L L S K F T K Y Q Y Y Q K K Y K K K K D S I Y K 297
15203 AAA------ATGAAAGCACTTTTTGCAAATTATCTTTCAGCAGATTCTACATTACAAAATATGAGCTTTGATTTATTTGAAAAACAAACT 15286
298 K Q Y I H T I L K E H Q I L N K K E I N K N I K F V L I N T 327
15287 ---AAAGATTTACAGGATGAACATTTAGCAAGCTTTTTCAATAAAAGTACACCATTA---ATACAACATAGCTTAAGTTTTGATTATTTA 15370
328 I R S I Y N T L L T S I L R E N I K I T L K N R I L F N Y M 357
15371 TCTAAAATGATACACATAATTAAAAATTATGCTAAAAAA------CCTGGGGAGATATTAAATATTCTTAGT------ATTTTATATTAT 15448
358 P Y V T I I S K Q Y I K T G Y K A E L S D L I Q E G I S G V 387
15449 AAAGAAAAAAATGCTTTATATAACAATAGTGAACTTGTTATATTTTTAGATAGTACAATGAGCGGGTCTCAACATTTAGCAACAATATTT 15538
388 S D A A D R F Q L G R G V R F L - T Y A Y W W M H - N Y M M 415
15539 AAAAATAAATTAGCAGCTAAAAATAGTTGTTTAATTTCTACAGATGAAACTAAATTTGACTTAAATATTAATTGCCTTGAAAAATTTCAG 15628
416 K T T I K K K K I I N I N N N E T P K K E L L L K I E K L Q 445
15629 CTATTTATTACAAAAGCATTATCTGACGAAACTTCTAAGTATTTAGCTAAATTTGAC---ATAAACCGTAATGATTTATATGCATTGAAT 15715
446 T E I K K N I K K K D N S - L Y K F D K I I R E E T K K L Q 474
15716 ---TTAGCAGAAATTTCTAATTTACTTTGTAAAAAAATATTTAATTCTGAAATTACTATTTCATGTTTAAAGTCATAT---TTAAAAAAA 15799
475 E I K K K L N R K E L I L Y Y L S S G I P P Y K I H T L E Q 504
15800 ATGGCTTTTAAATATGAAGTGACTCCTTGTGCAATTTCCGATACTTATTCT---TTTCCTGATTCTTTT---ATGCAAGAA 15874
505 L A V L F S V P H T T I Q T T L K K I K K K I G F Q N 531
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2519
Protein: lcl|KC353356.1_cdsid_AGH24305.1 [gene=orf746] [protein=hypothetical protein] [protein_id=AGH24305.1] [location=complement(50227..52467)] @ 0
DNA length: 4476 Protein length: 746
1 Nt shifts: 6 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.00
2520 CAGGTACAACATTAC---AAGATCTTGAAGAAGTTGCAC---AAGATGTAATGTATCCCAAAGAAATGTCTAGTATTCCTACTGAAAAAA 2603
1 M I Q Y L I Q I V Y T I Q N K L E N Q Y F K K L T I N I I K 30
2604 GTGAAGAACCAATTAAATCTGCA-GCAGTTAAAGAAGAAGAAAAAAAAATAATAGAA---AAACTTATAGAAGCTGATACTATAGCGGAA 2689
31 L R N E Y H L L S E Q E F Q K L W I K T K E V V K E N G I K 60
2690 AAAATACAAGGTAATTCTCATATTTTTAATCCATTAAGA---TTAGTTTATAACACCAGT---AGTAAAGTATGGAATTACCTA---AAA 2770
61 K I L L N N Y L F I I Y R S F L G N I G L Y Y I Y I R K D K 90
2771 AAAAATGTTGAATTTAAATTCCATAAACCTGAGTCTGAT---AATTAT---ACAGTGCCT---ATTACAGCCGTTTATGAT------ACA 2845
91 K K I P F F L H S L M A K Y E F L A I Q K I S I I L E L Y S 120
2846 AAACAAGGATCATCCGATATTCAATATAATTTAGAAAAAATAATTAA-AGATTTGAAAATAGCTATACAGG-AAAAAT------CTTTGA 2927
121 R I L N T T P S Y N E I Y L F I T I L N S I T K K N N N L Y 150
2928 ATAAAGAACAAGTAAAAAGCATTATTGATGATATTCGTAAAAATTATGTTACTAAAG---GGGTT-AGT---ATA---GAGAAT---GCT 3004
151 I K N K L N I N L M L F L Y N Q L L N I D Y H L I N E N I T 180
3005 AATGAACTTTTAACTCTTTGGAAGTCTTATGAT---TTTCAATATGAACCTTTAAAACAAATTTGTAAAATTAAAAAAGATATTATTATA 3091
181 K E D I F L K E Y F S W F F Q K K L K Y I N D G K N T V Y L 210
3092 AATAAAGAACAAGAAAAAATTGTTATAGATTCTAAATCATCTTATGAAGAAAAATTGAAAAATTTAGAAGAAAAAATGTCAATAGCTCTT 3181
211 S T Q K E - I I S N Y I Q I L N K K I T S E K Q N N K Q Q I 239
3182 AAAAATATAAATAATTTTCTTGAAAAAAATAAAGATTATACTAAAGAATTTCTTGAAGCAAAAGAATTACAAGAATGGTATGATTATTTT 3271
240 Q I Y Q T N I Y K S L E I K N Q W N K S L I F K Y D I Y L Y 269
3272 CAGAATAGAGGAGCATTAAAAAAATTATCAAAACAAGAAAAAGAAGTTTATGATAAATTATTAGAA---ATAAAAAATAAATATTTACCT 3358
270 T N K T L T E I I N K Y I L D T N Q T I K K N L K K D Y I L 299
3359 AGCGAAAAA---GATTTTCAAGAAAAAAATAGTAGTTATTTGACACCTCTGAAAAAAAATAGTGCTTTACCTATTAAT---TTACAAAAT 3442
300 F E N I N K Q K K N I T Y K H P F E I N Q K P Y I K T I Q K 329
3443 GAAAAATCA------GCTAAATGTTACTTG---CCAAAAGATTATGTTATGGAAATAACAAAT---ATAGAACGTGCTCTTGAAATT--- 3517
330 Q D F F F N K K Y I W E N D K K K E I L N E I Y L Q N R I N 359
3518 TTAAATAAATCACAAACATTA------TCTATTAATGATCTTAAATTG---TTATCCATTAAT---TCTTCGGCAGTTACTATAGATACA 3595
360 I Q Y L Q T L T N S F Y I I N N N I S Y N L S K E Q I I P L 389
3596 GAAGGTGTTATTAAAATATCACAAGAGGCGTATCAGTCTTTTACTAAATATAAAGATAGCTTAGGATTTAAATATTTATTAGAATATCCA 3685
390 H T P K K I K N E I I Y C S N Q F L Q I I L L I H I L K T S 419
3686 AAAACAGAAGAAATATTATTACGTATAAAAGAAAGGAATTTTTTTATTGCTAAAAATATGGATTCTAATCCTAATGGAATTATTGCTTTA 3775
420 T S S N Y I V I I E T K E F F D T L T K I L T I Y Q V K W Y 449
3776 GCTCACCTATCACATAATACATTAATTATTCCAAACCAAACCGAGAAAAATTTATATGTTAGGGTAGGGCTTGTTACTAGTACTAAAAGT 3865
450 S L I Q N N I K N I S N H I E I E - N E N N K Y I N V F I T 478
3866 GATTCTAATATTAAAATTGATAGTTATCAAGTTACTAATGAGGATTCTAATAAACAAAATAAAGATCAAATGTTTCGTATTTTTCCTACT 3955
479 N S I L L K E N I H L L K K K K N I L T I T M E L L P K Q I 508
3956 TTTTTAATTGTAGATGAGAAAATTGAGCCCTTAATAGTAAATCTTGAAATGACGTTGTATTTTTATGGCAAA---AATACAGATAATAAA 4042
509 N I C I S E H I Y I L F W N N N I S K Y F I N N T N T Q T I 538
4043 AGTATTGTA---GAAGAAATCATATTTACGCAA---TATGATTTAACAAAAAATATATGGTCCGAAAATTATTACCAATATCCTTTTAAT 4126
539 N Y I S K Q I I N K N I Y H L E N I I I T K T N Q K T L L N 568
4127 GTGGATCAA---GAATTTTTACGTCAACTTTCTATTATTTTTTATAGTAATAAATTACAAGAACTTCAACAGGATTATAAAGAACTACAA 4213
569 K E Y L K N T Q Q L Y I T Q Y T H R L L T D I Q N M S D Q K 598
4214 GATAAATTATATTCACTTCTTATTAAAAGTCACGAAGACTATAATAAGGAAATAGATCGCCTT---AAT---GAATTAAAAACAAATTAT 4297
599 L Q I Y C N Y L K T I Y I Q N T Y I P T Y Y N I D S T T N D 628
4298 TTGAAAGATAGAAAATATAAACAATATTTTAATTCATTAACAGATGAAGAACAAAAATTAGTTTCTCATATAAAAATTTTTCAAGATAAG 4387
629 T I N K M I T N I I N N N N I H K N K K I E F L G I H I Q K 658
4388 ATTAAAGATGATAATATACAAAATGAAAAAAAACAAAAGAAAGAACTTATTAATCAACTTTTGGAAAAAAATAAAAAAGGAAAAGATAAA 4477
659 K K I K R N K K E D Y K T K I L T L Q H I K S N F E N Y S Y 688
4478 GAAGAAGGAACAGAAATTTTAACTGCAAAACAAAAAAAGGAGAAATAT---CTAAAGGATAAACAAAATATAAATAATATCGAT---GAA 4561
689 I E K Q K N I S L S F L R F L Y D L K K E T N N N N R K M T 718
4562 AAGAATAATTGATTATTTTTTAATAA-TATATTATTATTTATTAT---TATTT-ATAGGTCTAATAATGACATCTTGGATAATT 4640
719 K N D E Y F F I L Q M I Q R Y R H F I S E L L L I K I I 746
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 94
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 43 Length-adjusted: 0.34
95 ATTGCTTCAATGACTGAATGGAATCCCTTCTTAAGA---GATAAGGTTCAAAAAGCTATACATAGCTCCTTGTCCCAT---ATATTACCT 178
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
179 GA-TTCTTCCGAAATATTATGATAACATATCTTTTACTTAATTCCTTTTTATTGATTAAACTTATTTTATTTATTTTAATTAGAATTTTT 267
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
268 CTAATTCCAAATATTTTTTCTAAATATATAATTATTATTTTT---TTTAGTATTATTATATACATATGTTATAAATATCCTCGTACCAAT 354
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
355 ATATTAATTAAGGAAGATTTATTCGAATATGCTTTAAAAACAACTAAAGAAAAAATGATAAATATATGTATCATAACGTTA---TATATA 441
91 R H L V W D A - G Y A L E I E N V Y L S A Y I M V G L A F L 119
442 TTTACTTTTGTTATAGG-TATATTTTA 467
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 477
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.09
478 ATAAATATAACAAAAAAAGTAGAC------TTAAAAATTTATTATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAAGAAGAAATT 561
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
562 ATTTTAAATGTGGTAATAATAATAACTTTTATAATAATTTATATTTTTATAATATATAAATTTACTCAATATTTTAAATTACAAGTAATT 651
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
652 AAAAGACATCTTTACTTAATAGGA---ATACCATTAAATAATAATTGGTATTCAACCGTTCATCGAAAGTAT---TTATGGCCTTTAGCA 735
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
736 AATTCTTTTCTT---AAAATAAGTATAAAACATAAAATTGAGTTATTGTATAA-AAAATATT-ATTTTGATAAAAAGCCTCATAAACCAA 820
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
821 GACCTGATAATTTTTTTTCTTTAT 844
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 811
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.05
812 ATAAACCAAGACCTGATAATTTTT---TTTCTTTATCTGAAGAGGCAAAAATTTTATTTTTTAAAAATAATCCTACATTACCTGAATTAC 898
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
899 TTTTTCATAAATACAAGAAAATGTCTATTTTC-ATAGATAATATTTTAACAAAAGGTCATTATTTT---ATATTAATTATTAGTATTCTA 984
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
985 TATGATGTTATAAAT---AATGATTTTATTTTGACTACTATATTTCAAATATTACCTTGGATATTTTTTTATGAACTTTTTCTAAGAATA 1071
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
1072 TCTAAATTTGTAGATGACATTTGGATACCATATGAT---CAAGCATTACATAATTTGATATATAGTAAA---AAATTAAAATATATAAAC 1155
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
1156 GAAGAAACATTA---ATGATAGAT 1176
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4844
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.12
4845 ATTAAATATAATAAATATATTAAACCTTATTATTACAAATTTGTGAGTAAATTTTATAAC---TTTACTGAAACAAAAAATATAAATGAT 4931
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
4932 GACCAGATACAAGTATTTGTC---TTTTTTATGCAGATATTTCCTAGAATT---ATC---TTAGTTTCTATTTTAATGATAGATACATTT 5012
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
5013 TATTTT---AATAAATTAGAAATATTTTATAAATTTGTATTATTGGGCTTATTTCCTTTTATTTTTAGATATTTTAAA---TATTCT--- 5093
61 Y V V N Q F S G F I - F L I A G F F L I L F L F Y H L F A G 89
5094 TTAAAAGAT---GTTTATGAACAC---TGGATTGTAGAATTGGAAAATAAATATTCGTTAGTAAGAATTTATGAAGTTGGATATAAATTT 5177
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M - V G L A F 118
5178 GATGATTCTCGTAAAAAAAATACAAAAGCT 5207
119 L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8081
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.20
8082 ATAATATGTAGTAGTTATATATATATAATTTATAGGCTTATTAAACCTAAAGTACCACCTCAATTT---ATACTTAATGTTTTGGTATCT 8168
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
8169 ---ATTATAAATACTGTAAAATCTTTT---GACAATTATACGAAACAATTTAATCTTATTTCCAATACCTAT---ATAAAAATATTTACC 8249
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
8250 TATATAGCAAATAAAATTAATTATTATAATGTCATTTTATGGGAAAAAATCTTACTTATTATAAATACTGTACCGCATATCATTTTA--- 8336
61 Y V V N Q F S G F - I F L I A G F F L I L F L F Y H L F A G 89
8337 CTTTCTGCTCTATTCATAGATACTTTTTATTTAGGTAAATTATTTTATTTTTATAAAGTCATTTGGGTTACATTA---TTCTTTTTCTTA 8423
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
8424 ATCCCATTTAGTTTA---TATTCTTTT 8447
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8081
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.20
8082 ATAATATGTAGTAGTTATATATATATAATTTATAGGCTTATTAAACCTAAAGTACCACCTCAATTT---ATACTTAATGTTTTGGTATCT 8168
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
8169 ---ATTATAAATACTGTAAAATCTTTT---GACAATTATACGAAACAATTTAATCTTATTTCCAATACCTAT---ATAAAAATATTTACC 8249
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
8250 TATATAGCAAATAAAATTAATTATTATAATGTCATTTTATGGGAAAAAATCTTACTTATTATAAATACTGTACCGCATATCATTTTA--- 8336
61 Y V V N Q F S G F - I F L I A G F F L I L F L F Y H L F A G 89
8337 CTTTCTGCTCTATTCATAGATACTTTTTATTTAGGTAAATTATTTTATTTTTATAAAGTCATTTGGGTTACATTA---TTCTTTTTCTTA 8423
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
8424 ATCCCATTTAGTTTA---TATTCTTTT 8447
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8810
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.08
8811 ATTATAACAACACATGAGATAATTACTAAATGGACAAATGTACAACAAAATATAAAAAAT---ATTAGAATTATAATATATATA---GGA 8894
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
8895 TATTTAATATGCTGGGCTTATATATTATACGTAAGTTTATCAAATTTTAAAGATTTTTATATGTTATCA---TGTATAATTGAAGTGATA 8981
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
8982 AAAACT---CATCTTCTACAAGGTAAAGTCCCACTAAAATTATGTATATTTTTATTAATTATAATTTTTTATAATGAAAAAGAACAAAAA 9068
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
9069 GATAATTAATATTATGATAATATGGGTTT-TACTTACAGATAGAGTAAAAGAAAGGAATATGCAAAATTACAGAAAATCTTCTTATTCAA 9157
91 R H L V W D - A G Y A L E I E N V Y L S A Y I M V G L A F L 119
9158 AAAAACTACTTTATACAATATACATTC 9184
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9961
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 74 Length-adjusted: 0.58
9962 TTAAACTTA---TTTACAATAGGATTGATTTTTTCCTTAAGAAATCTTAATATTGGAGCAACCATAAATATTTTCTTATTTCGACCAAGT 10048
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F - H R M T 29
10049 CTTGTAATATTATCGCAAATTATTTCACTTTGTGTATTAATGTATGTTTTTTACATTTATAACTTAGTTATAAAATACAAATTTTACAAA 10138
30 G G I L S V V L C F F V I L L K M L N F H L S - S Y T I Y S 58
10139 ATTTATTTATTTATGTGCCAATTTGAAACTTTTATA---AAAATATGTGACATTTTTACAGGTGGATATCGATTCTATGAACTTTTATAC 10225
59 V A Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A 88
10226 GATAACTTACATGATTTTATTTATATTAAACTAAAA---CCAATTAATAAAATAAAC---TCTTCTTATTTACAAGTG---CTAATGATA 10306
89 G V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F 118
10307 ATACTATGCAATAAGATCTTGTACATATAT 10336
119 L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9988
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 31 Length-adjusted: 0.24
9989 TTTTCCTTA---AGAAATCTTAATATTGGAGCAACCATAAATATTTTCTTATTTCGACCAAGTCTT---GTAATA------TTATCGCAA 10066
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
10067 ---ATTATTTCA------CTTTGTGTATTAATGTATGTTTTTTACATTTATAACTTAGTTATAAAA---TACAAATTTTACAAAATTTAT 10144
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
10145 TTATTTATGTGCCAATTTGAAACTTTTATA---AAAATATGTGACATTTTTACAGGTGGATATCGATTCTATGAACTTTTATACGATAAC 10231
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
10232 TTACATGATTTTATTTATATTAAACTAAAA---CCAATTAATAAAATAAAC---TCTTCTTATTTACAAGTG---CTAATGATAATACTA 10312
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
10313 TGCAATAAGATCTTGTACATATAT 10336
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10594
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 35 Length-adjusted: 0.27
10595 TATGAACGTACTAGAATATTAATACAAAGTATGACTCTTTATTATAAATATGATAAACAGATAAGAGAATATATATTAAGAGATTTCAAA 10684
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
10685 AGAATATATCAGCCATAT---AGTATGCGTTTAATCTTTTTAGGAATATTAATATTATATTATAAT---TTTTGT---TATAGTATGTCA 10765
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
10766 TACTAT---AATTGCATGATAATAACAATACCTTTATTATTAAGTTTTATATTATATGAGCATAGTTATCAATATTTA---GTGAATTTT 10849
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
10850 AGATATTTA---TGGATAATAAAAATA---TTATATTATACTAATTTAATATTGGTAATATATATATTTATA---ATAATATATTTGTCA 10930
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
10931 AGGAATACATTATATTTTATAACC 10954
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10777
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.05
10778 ATGATAATAACAATACCTTTATTATTAAGTTTTATATTATATGAGCATAGTTATCAATATTTAGTGAATTTTAGATATTTATGGATAATA 10867
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
10868 AAAATATTATATTATACTAATTTAATATTGGTAATATATATATTTATAATA---ATATATTTGTCAAGGAATACATTATATTTTATAACC 10954
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
10955 GATAATATACATATATTCAATTTTGAACTTATTCAAGAATTTAGCCAAAAAGAAAA-ATACGACTTTTTCATAAAATATTTAAA---TTA 11040
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
11041 TACCC-TGTATATGGAACGAGAATTTCATTCTATACGTACA-TCAACCTTTTTAAATACA---ATAATGTCTGATAAAAACTATTATGAA 11125
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
11126 AATTTATTATTATCCCTAGATATT 11149
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11904
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 31 Length-adjusted: 0.24
11905 ATTTTTTTTGATGAAATTTTAAAACTATATCTCTATTTTTTTAGGCATAAATTTAATGACAAAATGCGACTTTTT---GTAATAGCATAT 11991
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
11992 TCTATAAGAAATATTTGGGGACCTATTTATTTATTTTTTGATAGTATATGTAATTTTACACCGATTCCTGATGAATATTATTATGATGAT 12081
31 G I L S V V L C F F V I L L K M L N F - H L S S Y T I Y S V 59
12082 CATTATATATATGATTGGATTTATAATTATACTTTT---GTTACAAAATTATCACTAAATTTATTTATATATCAAAACACTTTTATG--- 12165
60 A Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G 89
12166 ATA---CATTTATTTTTTAAATGTAGTAAGAAAATGTTTCGTTTGTTATATATTCATTTACATTTTGATGCCTTTGGCAAATATTTACAT 12252
90 V R H L V W D A G Y A L - E I E N V Y L S A Y I M V G L A F 118
12253 ATTTTATTATTAAGTATAGTTATTATTTAT 12282
119 L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11984
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 34 Length-adjusted: 0.27
11985 AGCATATTCTATAAGAAATATTTGGGGAC-CTATTTATTTATTTTTTGATAGTATATGTAATTTTACACCGATTCCTGATGAATATTATT 12073
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
12074 ATGATGATCATTATATATATGATTGGATTTATAATTATACTTTTGTTACAAAATTATCACTA-AATTTATTT---ATATATCAAAACACT 12159
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
12160 TTTATGATACATTTATTTTTTAAATGTAGTAAGAAAATGTTTCGTTTG---TTATATATTCATTTACATTTTGATGCCTTTGGCAAATAT 12246
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
12247 TTACATATTTTATTA---TTAAGTATAGTTATTATTTATGAGATAATTCATACTAATATGTATTATACTTATTATATGCTTTTTATT--- 12330
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
12331 ACTTACATAATTAATGTAATATAT 12354
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12486
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 32 Length-adjusted: 0.25
12487 TTATATTTTATGGAAAAATTAAAAGAAGAAACTACTATT---AAATATATTTTAAATGATTTTGAACAAGTACCAGAAGAGTTAGTCAAT 12573
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
12574 AAACAAATAAATCAAATGTACTTACGTTTTAGTATAATACTAATATTACTT---TTT---ATGACAATTTTT---CTTTATGATGTTATT 12654
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
12655 AGATATTCTATAATAATAAAAATACTTAATTACAATATATATTCTTTTTTTATTCTATTGCCATTAATTTTTATATTATATTCAGCAACT 12744
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
12745 AAAATTTTTACTTTGTCTAATACAGCTGAAATTGATGATTTTACAGAATATGTCTTTAATAAAAAATTCAATATTATTTCTTGGATTTTA 12834
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
12835 ATATC-AATTCATTATTTATATTT 12857
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13003
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.16
13004 ATTAATATGGATATAAATATGAAAGAAAATTTAACTTATATCATAAGACAAATAGACTTTGAATATTTAATAACTGATTATATTAAACTT 13093
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
13094 AAAGATTTAAAAATTTATGTATATATGTTTATAGAAAATTATGTCTATTTAGAACTTTGTATCAATATTTTTATAACAAAATA-ATAACA 13182
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
13183 GAAGTTGTACAAGAATTTTCT---TTATTGCATCAGTTATATTATTTTATGCGAAATAGTATTGTAATATTAAGTGTTATCCAAACTGTA 13269
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
13270 GTATCTTTTGTACAAAAGATTAATTTTATCCTTAAAATTAATCAAGTAGAA---GGTATTTATCTTACTGTAAAAATTATTTATGAAAAA 13356
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
13357 GGTTTGCTTAATAAGATGACTGAA 13380
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13084
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
13085 ATTAAACTTAA-AGATTTAAAAATTTATGTATATATGTTTATAGA---AAATTATGTCTATTTAGAACTTTGTATCAATATTTTTATAAC 13170
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
13171 AAAATAATAACAGAAGTTGTACAAGAATTTTCTTTATTGCATCAGTTATATTATTTTATGCGAAATAGTATTGTAATATTAAGTGTTATC 13260
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
13261 CAAACTGTA------GTATCT---TTTGTACAAAAGATT---AATTTTATCCTTAAAATTAATCAAGTAGAAGGTATTTATCTTACTGTA 13338
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
13339 AAA---ATTATTTATGAAAAAGGTTTGCTTAATAAGATGACTGAAACACAATTAAAAACATTATTAGATATC---ATTTGGAAAAAAATA 13422
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
13423 ACAAGGAAA---TG-ATCTTATAT 13442
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16643
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.10
16644 ATAAAACTTGTTATACTCATGAATTATTTCCTTCTCTTTTTAAAATTCTCAATACAACAGATCCTCATTATCTCACATTTGCACAGCTTC 16733
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
16734 TCTTTGATCTTAATAAATCTC---CTAACGATGATAATTATTGGGATGGTATCATTACAAGTCCTTATTTTGTTAAATTTTAATTATAGA 16820
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
16821 GGTTTTTATAATAACTTTGT-TTTTTCAA-TTATTAATCTGGGTATTTTTGATTCCTTACTATTTCTTTCTCTATTTATACTTCTATAGC 16908
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
16909 TATATTTTGCTACCTAAAGTCCCTTTTAAGAGAGGTATTAAGCGGTGC---ATTAGT---TTTGTTCTC---AATAA-AACTTCCAAATA 16988
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
16989 AAATTCGTTATTATAGACATCCTA 17012
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17166
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.16
17167 AAGTCTATTTGGAGGAGTTTAAAAAAAGTCAATCTTGTTAAAGTAAAAGTTCACACTTAAAATGGTTTGTTAACTAAATTTAATAAATTA 17256
1 M N L N R P I S P - H L T I Y K M Q I - T N T L S I F H R M 28
17257 AAA------TGTTTTCATGTTTCCTTAATAGCATTTATAATTCTTTTT---ATGTTAGGTAGACATCTGGGAAGC---AAATTGTCTCGG 17334
29 T G G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S 58
17335 CTTTGCTATTAC---AATGTCATTTTATCACTTATA---ATTGTT------TAT---ATTATTTTATTCATGTTTTTT---TTATGGTCA 17406
59 V A Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A 88
17407 AATATAAGCTTTAATTTAGG-TTCTTGGGTTTCTGTAGGTACTTTAGATATTACTACAAATTTATAATGATCCTTTATCCATTACTTTGG 17495
89 G V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F 118
17496 TACATTAA-TTCCTTTATTACTTTATTAAT 17524
119 L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17403
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.09
17404 TCAAATATAAGCTTTAATTTAGGTTCTTGGGTTTCTGTAGGTACTTTAGATATTACTACAAATTTATA-ATGATCCT----TTATCCATT 17488
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
17489 ACTTTGGTACATTAATTCCTTTATTACTTTATTAATCTAATTTATTCTTATGATATTTACATGAAG---ATCCTAATTAGTTAAATTTTT 17575
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
17576 TGCTTATTTAGTTTTTTCTCTTTTTCTATGTTTGTCTTGTTTTTGCTGGTAATTACTTATTATGTTTTTAGGATGGGAAGCTGTGGATTA 17665
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
17666 GCTTCTTATTTCTTATTAATTTCTGGATACAAGAAATCAAGCAATCAGTCTGCTATTAAAGCAATTATTTTTAATCGTGAGGTGATGCAG 17755
91 - R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
17756 CTTTCATAAGTGCTATGGGTCTTATTT 17782
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 18006
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.04
18007 AGCAGGTGTTTCTTAATATTAAGATCTCTGTTATTTTCTCACATGCTCCTTATATTTCATTATTGTAGCTTGTATTGGCCTAATACAGCT 18096
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
18097 AATATTTCTTCTTTAACAGGTTATTACAATATGAC-ATAAAACGTATTATGCATTTTCAACCTGTAGCCAACTTGGTTTATGATGTTTGC 18185
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
18186 TATGGTATTGGTAATTATACTTTGCTTTATTTCATTTAGTAAATATGCTTTCTTTAAAGCACTCTTATTTTATGTGCC---GGATCCGTT 18272
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
18273 ATCCACGCTACCGG-CCATCAGGATATTCG---GCGTATGGGAGTTTATTTAAAGATTACCCATAACTTATGTTGCAATGCTCTTGCTTC 18358
91 R H L V W D A G Y A L E I E N V Y L S A Y - I M V G L A F L 119
18359 TTTATCTTTAAT---TGGTTTTCTTTC 18382
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 18246
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.17
18247 CTCTTATTTTATGTGCCG---GATCCGTTATCCACGCTACCGGCCATCAGGATATTCGGCGTATGGGAGTTTATTTAAAGATTACCCATA 18333
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
18334 ACTTATGTTGCAATGCTCTTGCTTCTTTATCTTTAATTGGTTTTCTTTCTTAAGTGGTTTTTATAGAAGGATTTTCTTCTAGAAGCTACT 18423
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
18424 TACAATATATTTGGTATGTCTCTTATGTTATTTATTTTATATCCATATTTCTACTGCTGTTAGTTATTTTACTCTTTCCGATTAATTTTC 18513
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
18514 TTTGTGTTCTTGGTGATCAAGCATATCAATAAAAACATTGAAAAC---TAT---TCTGA-AAGCTCCTATTTTCTATATCTACATTAATT 18596
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
18597 ATTTTAACTATACTTTCTATTTTT 18620
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 20706
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.14
20707 AATCCTCTTTATTCAAAAGAAGAAGACGTACTCTCAAATACCAAAATTCCC---AGCAATTCTTTAAGTATTCTTGATAGAATGTGTGGC 20793
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
20794 TACATGAGTGTTTATGTTTACGTATTCCTTCATACAAATATGTG-ATAATCAAAGCAAT-TTGAAAAGGTAACATACCCTATAT---TTC 20878
31 G I L S V V L C F F V I L L K M L N F H L S S - Y T I Y S V 59
20879 AAATCAACGATCGATGGCTTTTCACATTTAATTGTTTATTTGCTGCTGAAGTATCTAATACTAGTTTTTTAGTTCTCATTTGATTTTCTA 20968
60 A Y V V N Q F S G F I - F L I A G F F L I L F L F Y H L F A 88
20969 TCTTTTTATAAAAATGTG---GACCCAAAGTTT---TTGCATTACTTTAAATAA---ATCCAA---TATATTTCTAGTAGATTACGATTT 21046
89 G V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F 118
21047 TAATCAGATATAAGCTTATGGTATATATAC 21076
119 L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 23196
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.05
23197 CGTAATATTCTTCTGAATATAAAGCT-CTTGTATGCATTCACTATATGATCCA-ACCGTTCTGCTAATATTGCTTAGTTTGTTATCTGTG 23284
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
23285 GGAATTTTTTCTTATATTTTACAACAA---CCAAACTTCATACGGTGATGTAATCATAATTTGTCACAATCATAACAAACTTTGGTGATT 23371
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
23372 CATTATCTTACAAGG---AATACCTTCAGGAGGTTAATTCATAAATTCAAGGTAAATTTACTAGAGCTGCGGTTGTTCCACAATTTAATT 23458
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
23459 AGAAAAGATTTTGATAA-GCTTTAACAAAACTAAATCTGGAGAACTTGTTTCTTTCATACTTAGTGATAGCATCTTTAGGTTGTATGGTA 23547
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
23548 ATGAAAATCATTTCTTACGTAATA 23571
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24173
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 34 Length-adjusted: 0.27
24174 TTAGATTTTAATAGTAATGATATCAATAAACTACTTAGTAACAAATATTCTAATATAAATGGTATAGTATTATTTCGAAAAATTTGTGCG 24263
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
24264 CTATAACGTAATATAGTTCTTTTACTATATTATGGATTTTATAGGTTAAAGAACCAAAATATTTTGGTGGAATGTACTATTCTTGTTACC 24353
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
24354 TTTTACGTCATTCCATTTGGTAAGATTAATTTTACGTTCGCT---TTTATACTTTT-TTAAAAATTATGTTTAATATTATTGCTTATTTA 24439
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
24440 AAAAACAAATTTACTTTCCTATCAGATTTATCAATTTATCAAATTTCAATTATATCATTGGTACAATTTTATCATACACATTATAATTAT 24529
91 R H - L V W D A G Y A L - E I E N V Y L S A Y I M V G L A F 118
24530 AAAATTATAATAAGTTA-TGGTTTTCTTTT 24558
119 L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24436
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.21
24437 TTAAAAAACAAATTTACTTTCCTATCAGATTTATCAATTTATCAAATTTCAATTATATCATTGGTACAATTTTATCATACACATTATAAT 24526
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
24527 TATAAAATTATAATAAGTTATGGTTTTCTTTTAGTGCACAATAGTTTTCATAT-TTTCAAATCGCACCGTTTAGGTTTTATTG-TTATCT 24614
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
24615 TCTATTATAAATTATATTTCTTTTTGTGCACTAGACTTGGTAGTTTATTAGTTTATTTTATTATTATTATCTTTTGGAATATTGTTT--- 24701
61 Y V V N Q F S G F I F L I A G F - F L I L F L F Y H L F A G 89
24702 TTACTATCCCTATTGTTTGTGCAGACGATAATTTTGTATATATTGACGATCGTTCTGTATCATTATATGATCAGATGAATGATCCGAATT 24791
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
24792 ATAGGCCAGACTGCT---ATATTGTAT 24815
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 30772
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
30773 CATTATATTTATGATTTTATAGGTAGTTATCTAACATTA---AAGGTGGGATTAACTTTGGTTTAGCAAGGTTTATACACGGCTGTAATT 30859
1 M N L N R P I S P H L T I Y K M Q I T N T - L S I F H R M T 29
30860 TATAGTTTTATTAT-TTATATCTATTAACTTTTAATTTTCTAATAAAAGCTATATTATTTTA-ATGATCTGCTATGTTTTCTAGTATAAT 30947
30 G G I L S V V L C F F V I L L K M L N F H L S S Y T I - Y S 58
30948 TTTGATTATATTGTATTAAATTTTCAAATTTCTATATTTTTTTAT---GATTATTTCTTGTTAGTTTATATGCTTAATTT-CTAATAATC 31033
59 V A Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A 88
31034 GCATTAAAACTACTTTGAATATCCAATAATAGTTTTATTAGCAGTATTGGGAATGGTAATATTGTTGCGTTCTACTGATTTATAAATTAT 31123
89 G V R H L - V W D A G Y A L E I E N V Y L S A Y I - M V G L 116
31124 TTGGTTTTTAACAATGAGTTACAATCTTTTGTTTTT 31159
117 A F L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 31326
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.16
31327 TTGAAAATAATATAT---ATTTCATATAGTTTAGTTTTAAT-TCTTATAGTTTATTTTTTAAACTCGGTATAGCACTTTTCATTTTTGGC 31412
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
31413 ---TTCCTTTAGTTATACCTATTCTTCTTCTATGTTACCTATTTATTTATTTATTACCAAAAATCCAT-TATTTTATTTATTATATAAAT 31498
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
31499 TACATCTAT---AAGTTGAGT---TATATTATTTACTACCGATATTATTATCTTATT---TATAGGTACTGTCTTTGCTTTAAAGCAACT 31579
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
31580 AA-TTAAAAACATTCCTAGCTTATAGCGCATTGCAAATACTGCGTTT-TTTCTAGCACTATAATGTATAATCAACATACTCTTTTTATGC 31667
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
31668 TTTTATTTTTATTTATTTACTTAT 31691
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 31681
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
31682 ATTTACTTATAGTATCTGATTACAATAGCTTTTTACCTATTTGTTTTTGATTAAGTAGATAATTCTTTAGCTTTCATTAACTGCGTGACA 31771
1 M N L N R P I S P H L T I Y K M Q - I T N T L S I F H R M T 29
31772 TGA---TATTTTGAAAAAAGTTAATCCGTCTTAGCAATTTTCTATGCATTAATGGCCTTGGTTTTGCAGGAGTACCACATTACTAGGATT 31858
30 G G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V 59
31859 ---TTTTT-CTAAATTATTTATTTATTATCTGCTTTATATTTTCAGCTTATTTACTTGTGCTGTTTTATTAGCTTTTTCATTAATTAGTA 31944
60 A Y V V N Q F S G F I F L I A G F F L I L F L - F Y H - L F 87
31945 GTTTTTATTATTTGCGTTAGTTAAAATGTTATATTTCTCCTTTATTTAAAAAATGCTTCTGTTATAGTATACCTGCTATACCTGCTATAT 32034
88 A G V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A 117
32035 TATTACTATCTTTTCTGTAGTAGTATTTTTTTT 32067
118 F L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 33856
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.05
33857 TGTAGTCTCGGGATGCACATGAGATATAACCTGACGATTAT-AAAGTTCTTGTAACTTCTCGTGGTTCGTTTTAGTATACGCAAGCAGTT 33945
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
33946 GCTCTTGTATCTGTGGATTCAATTTATTTTGTATTACATGCAAGGAATCTAGTTGATACCTTTTCGGTTGTGATAAGCTTTTTTTATTCG 34035
31 G I L S V V L C F F V I L L K - M L N - F H L S S Y T I Y S 58
34036 GAGAGGTTCTTTGA-CTTTGCTTCTTGCTAAGCGGATTTATATTTAATGTAGTAGGGGATGTGTTTATATTATTATTAGTCATGTTACTA 34124
59 V A Y V V N Q F - - S G F I F L I A G F F L I L F L F Y H L 86
34125 TATGG-GGTTTTAAAAGGATTGCGATTAACATG---TTGATAATGTCCATTCTAGAGATTATACTTTAGAGAAGGAAAAAGGTAAACACT 34210
87 F A G V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L 116
34211 TCTTTGTGGATTACTCCCACTTCATCCGTTTTAACT 34246
117 A F L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34992
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
34993 ATCTTATTTTATTCATTACTTAAGACTAAGCTTAATTTATATCAATTACAGGTAAAAAACCTCATCTTGATTATAAGGAGAACGCTTAAC 35082
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R - M T 29
35083 GGTAAAGTACTTTCTGTTTTATTTGATAAAAGAACAACATCCTTTGAAGTC---AGATTTTATAAAGAATCAAAAAAGCTTGATCAAATA 35169
30 G G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V 59
35170 TTAGTGAAGTTAGGTTAGAGATATATTTCAATATAACTTATAGGCTTGTGTATGCTCATAAAAAAGATCATTTGTTATTAATACTCTTTT 35259
60 A Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G 89
35260 TTAATACGTAATACTTTTGATCG----TACTCATATGAATTGCATGCGAATTATTTTCTCCTATAATTGAAAGTATCATGTTCATTCTGC 35345
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
35346 ---AGTAGAAAAATATTTTATATAACC 35369
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 36270
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.13
36271 TATTGTTTCAGAACAAGTGGACGTAAAGGATTAAATACTTACCTCATTTGCTACTATTTTTTTTATTATTTATTTTATAACTTATCAGGA 36360
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
36361 TTAGCCCTTTTAGTTTTACTGCAGTTCACATTTAGTAATTACCTTGGTTTAGCATTAAGTATTTCATTGCATGGGTTATATAGGTATTAA 36450
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
36451 AGAATTAGGTCTAAATTCGTA---TATGTTTTTGTCCTAAAAATATGCTTTATGGTTATTACCTTTATTAATTGTGTAGAATTTTTATTT 36537
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
36538 TCTTCTTACGTCCTATAGTCTGGGTCTTCGTTT---ATTTGCAAA---TATGTTAGCGGTCATATCTTATTACATATTTAGCTGGTGGTT 36621
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
36622 GTGTTTATTATTAACTAAACTATT 36645
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45193
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.12
45194 AATTTTATAAATAAAGGAATTTATCGCTATCTGATAAATATCAGAAGATTCTGAACCAATAACATCGCTATTATCTGTAGGCCACTTGAT 45283
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
45284 GTAGCATCCTTCTCATATATCAGATTTTTAAAATTCTTAGTTATTAAACTTTCTATTAAGATTTTTGCATATAATATATTTTTATTTTTT 45373
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
45374 TTTTTACATGTGATTTTAACCATGATAATTTATTTAATACATTATTTGTTGGGTACTATGTTAAATTTGTATTTTCTTTACAAAAGCTT- 45462
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
45463 AGGAT-ATATTGTTCTATAGTGGTAATATTTTCCTTTATCCCGAACGTATAGGTAAAAGAAAGTACAGGGTTCATAAAGAAATGAGAATG 45551
91 R H L V W D A G Y A - L E I E N V Y L S A Y - I M V G L A F 118
45552 AATAATAATATAACCGTTTTTGTAATACTC 45581
119 L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46281
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.06
46282 ATGTTATTAATGATAATGATATTCTTATGAATACGGATA---AAGATAAATTGGCTCAAGCTATTGAAAGTGCTAAACTTATTGATTTAT 46368
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
46369 CTAAACCTAAAAAAT---CTAAAAATAAAATAGATCCTTCTAAAGCTGTTGTTAATACTACTAGTAAAAAGAAAAATAAAAGGGGTTCCA 46455
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
46456 CCCCTGCTAGCATAGCTAAAGCTGTCGCTTCTGATAATAATCCTATTAATAATATTTAAAATTATGATATCTACATTACCAATTTATAAA 46545
61 Y V V N - - Q F S G F I F L I A G F F L I L F L F Y H L F A 88
46546 ATTCGAAAGCATTTAGA-TATAAAAAAATGATAAAT---AACATAAAGAGTATTTTAAATAATTTAAAACTGTTCGTAGGAACAAAATAT 46631
89 G V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F 118
46632 CTTTTAAAAAGCGTACTTATATTTATATTT 46661
119 L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46470
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
46471 CTAAAGCTGTCGCTTCTGATAATAATCCTATTAATAATATTTAAAATTATGATATCT---ACATTACCAATTTAT---AAAATTCGAAAG 46554
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
46555 CAT---TTAGATATAAAAAAATG-ATAAATAACATAAAG---AGTATTTTAAAT---AATTTAAAACTGTTC---GTA---GGAACAAAA 46628
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
46629 TATCTTTTAAAAAGCGTACTTATATTTATATTT---ATTGCTGGCTTATATTAT------TTT---TTTACTAAG---TATACAGGAGCA 46703
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
46704 ACACCAGCGATT---CCAGTAACTCAAATGCCTTCAATACTCAATCCTACTCATATTGCATATATTCAACAATTAGAAGCTTTTCAAGCA 46790
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
46791 GCAACTTATGTTGAAGGGAAATTT 46814
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53430
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.05
53431 GCCAATTTAAATTTTAAAAATCTCGGAGCGTAGCTAACTGGTAGAGCATTCGGTTTGGGACCGAAAGGTTGCGAGTTC---AAATCTTGT 53517
1 M N L N - R P I S P H L T I Y K M Q I T N T L S I F H R M T 29
53518 CGCTCGATTCTTTTAATCAGAACTCTAGGTTTTAG-ATTAAAATAAATATGCTTAATTTTTTAATTGGTATTTTAATAATATTCTTTGCA 53606
30 G G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V 59
53607 AAAGAATTCATAATT---TTAAATCAAGAAATTATTATTTATTCTATATTTCTATCAATTTTATTTTTTTGTATAAAATCTTTTGCTTCA 53693
60 A Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G 89
53694 TTG---GATACAATATTTGAAAATATTCGCTCTAATGAAAAATCCAATTTAAATCTTAATTCTAAAAACGAGAAAAATTTTAATGATACA 53780
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
53781 TTAAA-TCAACGTTATCTTTTGAATTC 53806
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 59425
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.05
59426 TTAGTTTATTTTGTGGCTATACTAGTGAAACTAATCGTACTCCTTTTGATTGCCTGAAGCTGAAGTGAACTTGTTGCAGGTTATAGTGTG 59515
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
59516 AATATTCTA---GTGGTCCTTTGCTTTTT----ATTTTATTGCAGAATATGTAATTTAATATTTGGTCGTTTACA---CAACT-ATTCTT 59594
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
59595 TTTCTTGGAGGATGGTTCCAAGTTTCTTATTTCCTTTTTAAATGGTTTTATTTTATTTGCTTTAAAATAATGTTTATCCTAGCTTTATTT 59684
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
59685 TGTTGATTAGAGCAGCACTCCGAGATATCGTTGGGACCAATTAATGACATTAGCTGGAGAGCCTTTTTACCAATGTTTTGTTAGGGTGTT 59774
91 R H L V W D A G Y A L - E I E N V Y L S A Y I M V G L A F L 119
59775 TTTTTGTTTATGCTTTTTTTAATTTTT 59801
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62306
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 654 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
62307 ATGAATTTAACATTAGAGATA---CCTTTAATGTTAATAATGGAGTAT---GTGATCAAAGCACTATTTTTTCAGCACTAATGGCTAAAT 62390
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
62391 ATGTTGTATCTTATTATAATTTGAATTCAAAAGATATTATTGTTAATAGTACACCATTATATTTA-ACAAAAGATATTTCTCCTGAAATA 62479
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
62480 AAGGCCAGCATGGAATTTAATAAAAATTTAACAGGAAATTCGTGTCCTGATATTACTTTAAAAGAACATCCTTATGATTTTAAAGATTCA 62569
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
62570 AAGGATATAAAATGGAATAAAAATCAGATTTATTTGGTTGATAATACTAGTTTTAATGAACAGGCTATAATAATGTTAAATCATTTGGAA 62659
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
62660 AAATCTTTGATTAATCAATTAACT 62683
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 251
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
252 TTTATATATTATAAAAATATAAATTATTATAAAAGTTATTATTATTACCACATTTAAAATAATTTC---TTCTTTTGTAAATTCAGTAAA 338
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
339 AAGATTTTTTA-GCATTATATAATAAATTTTTAAGTCTACTTTTTTTGTTATATTTATATATCTAAGAT---AAAATATACCT-ATAACA 423
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
424 AAAGTA---AATATATATAACGTTATGATACATATATTTATCATTTTTTCTTTAGTTGTTTTTAAAGCATATTCGAATAAATCTTCCTTA 510
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
511 ATTAATATATTGGTACGA---GGATATTTATAACATATGTATATAATAATACTAAAAAAAATAATAATTATATATTTAGAAAAAATATTT 597
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
598 GGAATTAGAAAAATTCTAATTAAA 621
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 2468
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.20
2469 TTTTGTATCATAAACGGCTGTAATAGGCACTGTATAATTAT-CAGACTCAGGTTTATGGA---ATTTAAATTCAACATTTTTTTTTAGGT 2554
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
2555 AATTCCATACTTTACTACTGGTGTTATAAACTAATCTTAATGGA-TTAAA-AATATGAGAATTACCTTGTATTTTTTCCGCTATAGTATC 2642
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I - Y S V 59
2643 AGCTTCTAT---AAGTTTTTCTATTATTTTTTTTTCTTCTTCTTTAACTGCTGCAGATTTAATTGGTTCTTCACTTTTTTCAGTAGGAAT 2729
60 A Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G 89
2730 ACTAGACATTTCTT-TGGGATACATTACATCTTGTGCAACTTCTTCAAGATCTTGTAATGTTGTACCTGATGGAAAATATTTTGTAATTT 2818
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A - F 118
2819 CTTGAGGTGTTTTACTCTCAGGCATTTCTT 2848
119 L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 2794
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
2795 TTTCTTCTAAATTTTTCAATTTTTCTTCATAAGATGATTTA-GAATCTATAACAATTTTTTCTTGTTCTTTATTTATAATAATATCTTTT 2883
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
2884 TTAATTTTACAAATT------TGTTTTAAAGG-TTCATATTGAAAATCATAAGACTTCCAAAGAGTTAAAAGTTCATT---AGCATTCTC 2963
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
2964 TATACT---AACCCCTTTAGTAACATAATTTTTACGAATATCATCAATAATGCTTTTTACTTGTTCTTTATTCAAAGATTTTTCCTGTAT 3050
61 Y V V N Q F S G F I F L - I A G F F L I L F L F Y H L F A G 89
3051 AGCTATTTTCAAATCTTTAATTATTTTTTCTAAATT---ATATTGAATATCGGATGATCCTTGTTTTGTATCATAAACGGCTGTAATAGG 3137
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
3138 CACTGTATAATTATCAGACTCAGGTTT 3164
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 4307
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 28 Length-adjusted: 0.22
4308 TCTAATAGTACGAGATCGAATAAATCTAC-TCCAAATTATCCAAGATGTCATTATTAGAC---CTATAAATAATAATAAAT---AATAAT 4390
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
4391 ATATTATTAAAAAATAATCAATTATTCTTTTCATCGATATTATTTATATTTTGTTTATCCTTTAGATATTTCTCCTTTTTTTGTTTTGCA 4480
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
4481 ---GTTAA-AAT---TTCTGTTCCTTCTTCTTTATCTTTTCCTTTTTTATTTTTTTCCAAAAGTTGATTAATAAGTTCTTTCTTTTGTTT 4563
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
4564 TTTTTCATTTTGTATATTATCATCTTTAATCTTATCTTGAAAAATTTTTATATGAGAAACTA-ATTTTTGTT---CTTCATCTGTTAATG 4649
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
4650 AATTAAAATATTGTTTATATTTTC 4673
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 5171
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
5172 CAACATACTAAATACCCC------CCAAATATTACTATTTTTGACGTTTTCATTAAGGATACTTCCGATACAACTTCTATCCTAGATAAA 5255
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
5256 AACATTTTTAAATGAATAATATTTGGCATAAGCTCACAATATAAGGCTCTCAAAATATCTAAATCTTCACTTGT-ATAAAGAGCTTT--- 5341
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
5342 TTTATTTTTATA---TTTATTTAAACAATATTCATTATAGACTTCACTTTTACAATAAGGAGTTGATTCATACTCATAATCAACTTCATC 5428
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
5429 AAGTAAATAATCTATAATATTATTAAATTTAATTTCTATATATTCCCG---TATTGTTTTTTCTTCATCATGATAAAT---AGCTTTTGT 5512
91 R H L V W D - A G Y A L E I E N V Y L S A Y I M V G L A F L 119
5513 ATTTTTTTTACGAGAATCATCAAATTT 5539
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 5677
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.10
5678 ATTTCTTTCATAAAACCTTCATAATCTTTTTCATCTTTTGCAAGGTATTTAATATATAATTCTTCCAGCATTAAATTATCCATAAATGTT 5767
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
5768 TCTACTATTTCCTTCATTGTTTGTGAATCTTCAAGACAATCCAACTTTTCTAATATA---TTAAACAAACCTTCTTTA---AGTATTTTT 5851
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
5852 CTAAAATTTTCAAAGACTTCCTGATGATTTTTTTCATCTGCT---TTTACTTTGAAAGTAATAATTTTA---CATATATTTATTAAAATT 5935
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
5936 ATTATTATCATTTG-CATTATTATTTTTATTATTCTTTTGACCATTTTTGTATAATATTTTTTATAATCTTGCATAATATCTTTTTAATA 6024
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
6025 ---TTTTCTATTGTTAATAGATTT 6045
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 6363
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
6364 TTTTCATATCAATATTATTTACCTCCTTAAACTTTTTACTACTCAATGGAGATC---GAATACCTTGTAATTCTCTATTG-CTTAA-ACC 6448
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
6449 TCTATGTCTAGTTTGTATTTTTGTATCAGTAATATATTTATTATGATGCTG---TTTACATTG------TTGACGCAATTTACGACATTG 6529
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
6530 TGGATTCGAAATTCTTTTAGAAAAAGACATTGAACGGTGATCAAGCAATTTTTTAGCATGACCTATTTTTTTATCAGTGGGATAAAAACG 6619
61 Y V V N Q F S G F I - F L I A G F F L I L F L F Y H L F A G 89
6620 CTTAGATATTTGAATGACTATCGGCTTACAAAGATACAGAAAGCTATTTATTTTTTTATTAAGTATTAAAGTTCGCATCATACTTACTCG 6709
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
6710 TTATTAAATAATTATTTTTTTGAATTT 6736
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 7682
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
7683 AAAGGTATTTCTCGTGGT---AATCTATTTCTT---ATATACCTACCCCAAATATATAATGAAAGTAATATA---AATCCAAATACGGGA 7763
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
7764 AATAAACGATGTATATTTTTAATTATTAAATTTATTATCCTTGAAATAATATCTATC---ATTTTTTATTTTGTAGTTGAAATAATTGAT 7850
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
7851 TTTTCTGTTTTTCAACTTCTTTTTTTTGCTGTTGTTCAAGAGTCATAGGGTGTTTAGGTTTTTTTTTTTGAGCT-TCTTTGTCAACATCT 7939
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
7940 TTGCACATATTTAATAATTGTTCATTTGATATT---GTTTGTGGCATATATTTCTCATAATGTTTAGTTTTTAAGTTATTATAATTATCT 8026
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
8027 ACTAAATCC---TTTTTTACATTA 8047
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 7867
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.07
7868 AAATATTTTTATATAGGTATTGGAAATAAGATTAAATTGTTTCGTATAATTGTCAAAAGATTTTACAGTATTTATAATAGATACCAAAAC 7957
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
7958 ---ATT---AAGTATAAATTGAGGTGGTACTTTAGGTTTAATAAGCCTATAAATTATAT-ATATATAACTACTACATATTATAATTAACA 8040
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y - S V 59
8041 TTATTAAACGTAATAATGTTAAATCAAAAGGTATTTCTCGTGGTAATCTATTTCTTATATACCTACCCCAAATATAT-AATGAAAGTAAT 8129
60 A Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G 89
8130 ATAAATCCAAATACGGGAAATAAACGATGTATATTTTTAATTATTAAATTTATTATCCTTGAAATAATATCTATCATTTTTTATTTTGTA 8219
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
8220 GTTGAAATAATTGATTTTTCTGTTTTT 8246
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 8561
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 37 Length-adjusted: 0.29
8562 ATAAACTTACGTATAATATATAAGCCCAGCATATTAAA-TATCCTATATATATTATAATTCTAATATTTTTTATATTTTGTTGTACATTT 8650
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
8651 GTCCATTTAGTAATTATCTCATGTGTTGTTATAATACTTTTTAATCTAATT---ATTAAATTAAGATCCTTTTCGATAAT-GGTGTTTTT 8736
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
8737 TATATCTCCACAAGATTTCCAGGTAACATTATATTCTTTAAATAAATTATTATACCATTCTATTGTTGGACGTATAATATAATAAAAATG 8826
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
8827 AGGTGTTTTTTGCTC---GTAATATATCTCATCAAAATAAGTAGGAATAAATGTTCTAAAAGAGATCTC---CATATCATTAGGCGGAAT 8910
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
8911 ACATTCATCATCATCATCCTCATT 8934
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 8839
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
8840 CTGATATTTTTGGAATGTATATTGTATAAAGTAGTTTTTTTGAATAAGAAGATTTTCTGTAATTTTGC-ATATTCCTTTCTTTTACTCTA 8928
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
8929 TCTGTA---AGTAAAACCCATATTATCATAATATTAATTATCTTTTTGTTCTTTTTCATTATAAAAAATTATAA-TTAATAAAAATA--- 9011
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
9012 TACATAATT------TTAGTGGGA---CTTTACCTTGTAGAAGATGAGTTTTTATCACTTCAATTATACATGATAACATATAAAAATCTT 9092
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
9093 TAAAATTTGATA---AACTTACGTATAATATATAA-GCCCAGCATATTAAATATCCTATATATATTATAATT---CTAATATTTTTTATA 9175
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
9176 ---TTTTGTTGTACATTTGTCCAT 9196
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 10550
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
10551 ATATTATTATAAATATATATATTACCAATATTAAATTAGTATAATATAATATTTTTATTATCCATAAATATCTAAAATTCACTAAATATT 10640
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
10641 GATAACTATGCTCATATAATATAAAACTTAATAATAAAGGTATTGTTATTATCATGCAATTATAGT---ATGACATACTATAACAAAAAT 10727
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
10728 TAT------AATATAATATTAATATTCCTAAAAAGATTAAACGCATACTATATGGCTGATATATTCTTTTGAAATCTCTTAATATATATT 10811
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
10812 CTCTTATCTGTTTATCATATT---TATAATAAAGAGTCATACTTTGTATTAATATTCTAGTACGTTCATATTCACTTATTGTTTTTCTCA 10898
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
10899 ATTTATCGTGTATTTTATCTTCAT 10922
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 11030
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
11031 AACAATTTTAAAAAACCCATCATATCC---ATTCAAATTTTTGACTAT---TTAAG-AATTCTCCTATTTTGTTATATATTTTAGTAATT 11113
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
11114 GGATTTTTATCTATAATTCTTTGTAATTCCTCTTGTCTGAGTTCTTCTATCAATTCTGATATAGTTTCAATCATTAGCTTTTCA---TCT 11200
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
11201 AATTCTATAAAACGATCTTCTACTATAATAGCAATTGTAAGTAATTC-TTTTGCCAATACTTTAA-TTGTATTAA---TATCTAGGGATA 11285
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
11286 ATA---ATAAATTTTCATAATAGTTTTTATCAGACATTA------TTGTATTTAAAAAGGTTGATGTACGTATAGAATGAAATTCTCGTT 11366
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
11367 CCATATACAGGGTATAATTTAAAT 11390
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 13337
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.07
13338 GTTATTATTTTAAAAGCCTTTTCG---CATGCTTCTTTATCTAAATTA---ATACGTTCGTTCTTATAAATA---AAAGTGTTCACAATA 13418
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
13419 GGATCGGTG---GTAGTAATTGATGTGTTCTTAAGAGCTTTATAAATTTTA---GTTACTATATCGTATGCTATTATTTGGAATTTAGAC 13502
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
13503 ATGGTTATTTTCAGTTATGTAGAACACTGGTATAAAATCATTGATTATGTTTATCTTATAGTAATTTTTTTTTATAAAGATACATATGAT 13592
61 Y V V N Q F S G F I F L I A G F - F L I L F L F Y H L F A G 89
13593 TTTTATTTTTTGATATAAGATCATTTCCTTGTTATTTTTTTCCAAATGATATCTAATAATGTTTTTAATTGTGTTTCAGTCATCTTATTA 13682
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
13683 AGCAAACCTTTTTCATAAATAATTTTT 13709
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 13634
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.07
13635 TTGCTAATTCACATACGATGTTTTCAGGAATTGAATACTAGTAATATTTTTATCTTGAA-ATGTTGTCCATACTCTTTCCATCAAAGATA 13723
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
13724 AGCAATATTTCTTTGTATTATTGTATTTATCATGTTTA-TATGATCTTCTTTTAATAAT-GTAAAAAAGATTTCTTTA---CCATTGAAA 13808
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
13809 TTCGATATTGATGATTTTTCTATATTTTGTGCTTCCATAATTGCATCGTATATTACTTTTCTTATTACTTTTTCCCATTTTGTTGTGGTT 13898
61 Y V V N Q F S G F - I F L I A G F F L I L F L F Y H L F A G 89
13899 TGTTTTTTCTTAATTAAATTTTTTTCATCTTCTTGTAATATCGTTGTTATTATTTTAAAAGCCTTTTCGCATGCTTCTTTATCTAAATTA 13988
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
13989 ATACGTTCGTTCTTATAAATAAAAGTGTTC 14018
120 L - T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 21717
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.10
21718 ATATCTATCAAT------TTTTCTAACCACATAAAATCTTTTTTTAAACGCATACATGATATCGAACACCTGGTAATCAGGTACACGACC 21801
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
21802 TCCCCTATCATTACTTCATTG---TTTTTTTGTAATCTATACCAAATCCTGGTATATAAGCAATTAAATAACACCATT---AGT------ 21879
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
21880 TA-ACA---AAC---TTTTGTAATTTTGCGTTTGCAGAATTAGGTTTCTTGGTTTAACTGTTCCTACTC---CATGCAAGTACATATTTA 21959
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
21960 AAAGGACTCCTTCAAAATGA-GGTGTGATGATCGGAATTGTT---TTGTTTGACGATATTTTTAATATATTGAGAAAAAGTACCATTTTA 22045
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
22046 TATGTAAACTATTACTTTATTAAA 22069
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 22817
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 38 Length-adjusted: 0.30
22818 ATATCGTATATACGTTTACTGTAATCACCACACGTGGATGATTAT---TTGTCCATTAAAACACCACCTTTACTTTTTAAACGACAACTT 22904
1 M N L N R P I - S P H L T I Y K M Q I T N T L S I F H R - M 28
22905 AAAGT-TTAATTCTTGATTGTATTTTATTACTTTTTTTATAGTTTGTAAATATCAAAAAAATGATAAGCTATGCATATGATATTTATTCA 22993
29 T G G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S 58
22994 TTATTTTTTATTTTTATTTTTTTTGATATACGAGTATGACGTTTA---GATTTTTTAAATTTTTTATTACTTTTTATATTATTATTTTTT 23080
59 V A Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A 88
23081 ---CTTACTTTTTTAAAA---GATTTTTTATATCTTTTTTTTTTTGAAAAAGTA---TTAGTAGTTCGGATATTATCTTATTTACTCTGC 23161
89 G V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F 118
23162 GTGTTA---TACCTATGT---TATATATTT 23185
119 L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 25890
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 36 Length-adjusted: 0.28
25891 TTTGAATTACGAAAAAAAATT---CCTTATGTCGTACTGATT---TTAGTTATTTGAAACAGCTGGTATTTA---CATTTCATTACTACT 25971
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
25972 TCATTGGTGTTAATCTTACTTCTTCCCTATGCA---TTATTAGGTCTTGCAGGAATGCAC---GCCGTATTCCAGATTATCCTGATGCTA 26055
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
26056 TTTACATTTTAATTTAATAGTAGTTATGG-TTCTTTTGTTACTTAGTTTCCACTATCATATTCTTTATATTTGGTGTGTTTTTAATTATA 26144
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
26145 ATTTATTTATAATGGTTTTCCTTCTATATTTTATATATTAAACCTTTAAT-CAAAATTACTTTCTTCGTATTAAACAAATATTCAAGGAA 26233
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
26234 ATAATGAATGTCTTAATAGTATTC 26257
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 26503
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.11
26504 CTG---TTTAGCAGGTGCTATACTATGTTATTAACTGATGTAATTTTAATACATCTTCTCCTGATGCAACGGTGGTGGAGA---TCCTAT 26587
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
26588 TTTATATCAACATTTGTCTTGGT-TTTTTGGCCATCCAGAAGTTCAT-TTTAATTTTACCTGGTTTTGGTATGTTTCTATTATTATTCAA 26675
31 G I L S V V L C F F V I L L K M L N F H L S S Y - T I Y S V 59
26676 GCTATGCTAATAAAGTATTTTTGGTTATTTAGGTATGGTGTATGCTA-TGTTGTCTATTGGTATTTGGGTTTTATAGTGTGGGCTCATAT 26764
60 A Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G 89
26765 ATGTATACTGTAGGATTGGATGT-GGATACGCGCTT---ATTTCACGCTGCTACTATGATATTGCTGTGCCAACGGTATTAAGATTTTTA 26850
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
26851 GTGGTTAGCAACCTTATTTGGTTCTTATCT 26880
120 - L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 26503
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.12
26504 TGCCTGTTTAGCAGGTGCTATACTATGTTATTAACTGATGTAATTTTAATACATCTTCTCCTGATGCAACGGTGGTGGAGA---TCCTAT 26590
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
26591 TTTATATCAACATTTGTCTTGGT-TTTTTGGCCATCCAGAAGTTCAT-TTTAATTTTACCTGGTTTTGGTATGTTTCTATTATTATTCAA 26678
31 G I L S V V L C F F V I L L K M L N F H L S S Y - T I Y S V 59
26679 GCTATGCTAATAAAGTATTTTTGGTTATTTAGGTATGGTGTATGCTA-TGTTGTCTATTGGTATTTGGGTTTTATAGTGTGGGCTCATAT 26767
60 A Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G 89
26768 ATGTATACTGTAGGATTGGATGT-GGATACGCGCTT---ATTTCACGCTGCTACTATGATATTGCTGTGCCAACGGTATTAAGATTTTTA 26853
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
26854 GTGGTTAGCAACCTTATTTGGTTCTTATCT 26883
120 - L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 27004
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.14
27005 CTGTTATATGCGTATGGAGTTAGCAGTTGTGGTGATTTAATTTTAAATTTAATTATCAAC---TTT---ATAATACAT---TGTAACTGC 27085
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
27086 TCATGCCTT---ATTATGATTTTTTTCTTTGTGATGCTGCTTTAATTGGTGGGTTTGGAAATTGGTTTGTACTTTACTTATAGGTGCTCC 27172
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
27173 TGATATGGCATTTCCTCGTTTAAATAATATAGTTTATGGTTATTACCTTCCTCTTTAATTTTACTTCTTTTATCTTCTTATGTTGAAATG 27262
61 - Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G 89
27263 GTGCTGGAACTGGTT---GGACTGTTTATCCTCCACTATCTTCTATTACTGGTCATAGCGGACCATCTGTTGATTTAGCTA---TTTTTA 27346
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
27347 GTTGCA---TCTAGCTGGTGTTTCTTC 27370
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 29344
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.09
29345 ATAAATATTAATTAAAAACATAATAATTATTTTACAATGATTATGATTTAGCACGTAATGGCAATGGAA---TTTTCAAGATCAGCTTCT 29431
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
29432 CCTTTGATGGAAGGTTTATTGATCTTCATCATAATATTTATT---TGTTTTAATTTTAATTTTGGGGTTGTTACTCTTTA-ATTGTTTCC 29517
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
29518 ---ATTATTAA-AGATACTCT---TACATTTGGATAAACCAAATAAAAAAAATATATTCGACAAAAACAATATTATTATTTTCTAATTTA 29600
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
29601 AATCATGGTACATTCTAGAAATAG------TTGGACATT---AATTCCTTCTTTTATCTATTTGCC---ATAGCTATTCCATATTTGCTC 29678
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
29679 TTCTTTATTCTATGGAAGAGATTT 29702
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37099
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 32 Length-adjusted: 0.25
37100 AATGATTTAAAAAGGATTATTGCTACTCATCTATTGCACATATG-AATTTTTTAGTGGGCTATTTTTGTAAAAGATTTATTAGTTTAACA 37188
1 M N L N R P I S P H L T - I Y K M Q I T N T L S I F H R M T 29
37189 GGTTCTTTATTATTGCAAATGCTCATGGGTTTCTTCTTCCGCTTTATTTTTAGCAATGGAATGTTATATGAT---GATATAAATCACGTA 37275
30 G G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V 59
37276 ATATTTCTATTATCGTGGTTTGTTACTGTTATGCCAATATTTTGTTTCTTCTTTTTTATTTTTTCTTTAGCGAATTTAGGGTTTCTTCTA 37365
60 A Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G 89
37366 CTGTTAATTTTATTCTG-AAATGTTAATATTTTTTGGCTTATTTCAAACAGTCCTTCTATAGCTATTTAACTTTAACAGGTATTTCTTAT 37454
90 V R H L V W D A G Y A L E - I E N V Y L S A Y I M V G L A F 118
37455 CTGCAGTTATTCTTTTGT---TTTACTTAC 37481
119 L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37341
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.10
37342 ATTAAGATCAAAATTCCGATGATTCCTTTCCATTTATGGCTTCCTAAAGCCATGTTGAAGCTCCTACTACG-GTAGTGTT-TTGTTAGCA 37429
1 M N L N R P I S P - H L T I Y K M Q I T N T L S I F H R M T 29
37430 GGAATCTTTTAAAATTAGGTTCTTAGGTTTTATACGCTTTCTCTT---TTCTTA---TTCCTAATGCTTCTTTTT---ATTTCTACCATT 37510
30 G G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V 59
37511 AATATTATAGTTGCTGTGATATCA---ATTATATTAGCTCTTTTACAGTTTACGTCAAAATGATTTAAAAAGGATTATTGCTACTCATCT 37597
60 A Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G 89
37598 ATTGCACATATGAATTTTTTAGTGGGCTATTTTTGTAAA---AGATTTATTAGTTTAACAGGTTCTTTATTA------TTGCAAATGCTC 37678
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
37679 ATGGGTTTCTTCTTCCGCTTTATTTTT 37705
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37822
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 5 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.05
37823 ATAGGATTATTACAAATACATTGTCTACATCTA---TTATATAAATACTAATTATTTGTTCTGATGTCC---TTTCATCT-TTTGTGATA 37905
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
37906 ACTTATCTTACATGTTAGATTTTATATAGTAATTT-ATATTATTTTATCTACTTTTTAGGATGTTTAGTTGTCTTATTACTAGAGTAATT 37994
31 G I L S V - V L C F F V I L L K M L N F H L S S Y T I Y S V 59
37995 GAATATGTCTTAAAGAAAAATATATATTTTATTTTTTGTATTGTATTATTAGTAAA-TTGCTTTTCAACTTAGAGATTTAAACTTTTATT 38083
60 A Y V V N Q F S G F I F L I A G F F L I L F - L F Y H L F A 88
38084 TATTTTTTGAAGCTTATT---GATACCTGTTTTGCTCTT---ATAGG-AATTTGGGGTTACAAATAGCTAAGATTTTGCTGCTAATAATT 38166
89 G V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F 118
38167 CTTTTTATATACTTTATTGG-TTCTTTTTT 38195
119 L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 38710
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
38711 TGTAGCTTG---AGG---ATGAATCTTAATATTTTTATTATTCGAAGGAACATGGACCGGAATTATCGCTACTTTAACAACTGTACCAAT 38794
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
38795 CGCATATTTTTATGGTTTTATAAAAAATAAATTATTAAAATAATATTATTAAT-CATCATTTATATAAATGCAGGACTTTTTATCTAAGC 38883
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
38884 AT-ATA---AAACAATATAATAAA---GTCAATTTGATAAAAAGTAGTTGTTTATTGATATTATTAACTTTTAATTTTTATTCCACTTAC 38966
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
38967 CGT---TTAATTATGTCAGAA---TATATAAATGAATTAGTTAAAATAGCTTTTTT-ATAATGATGTCCTTTGCTTTAGCCTTAATTCTT 39049
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
39050 TTAGGTGCTGTTTATGTTTTAAGT 39073
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 40442
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
40443 ---GATTTAAAAGTACTATTACAGGTTCATCACAATAAATAC---TTCAATTTATGCGTATCTATAAAATATTTATTTCGCGCTAATTTA 40526
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
40527 AATCTTTTAGCACTGAAATTAATCCATGAAATAATATCTCTATAAAAAACCATTATGTTTTTTCTTATTATATTTGAAGATATAATAACT 40616
31 G I L S V V L C F F V I L L - K M L N F H L S S Y T I Y S V 59
40617 TATTTTGTTTTTTACCATAAATAAACTGTTTGGTTCTTTGTTAAAAAGCTTTTTAATAATAATTTTGTTTACTTAAATACCTTCAATGCT 40706
60 A Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G 89
40707 ATTATTTCATTAAATTGTAATAAAGATAAGAAGAGGCAATAT---CATATAAAAATTTCAGCT---ATAGTTTGCCAGATAACCTATTTT 40790
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
40791 TTTGGATTT---TATTAGATCATTATA 40814
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44140
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
44141 GTTTCTAATAATCAAATGATTGTTACTTTTCCTTCTATTTTT---ATTCAAGGAATTGATGCT---CATATTTTCCATAAGTGTTTGAAT 44224
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
44225 AATATTCATATGCTCATATA-CTAGTATTTATTGTCTTG---AAGGCTTATAAT---TCTATAAATTCTTTCTTTACTTTCTAAGAAGCA 44307
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
44308 CCCTATTATTCAATGTACCAATCTCGAGCTTATCAAACATTCGGTTTTATTATTGAACGATTACCTTATATTATTAATGATACAATATCT 44397
61 Y V V N Q F S G F I F L I A G F F L - I L F L F Y H L F A G 89
44398 TGGAGAATGTTAATCTTTATTTTTTTATTTAATGATACATATATTCAAAATATAATAAAAATAGTTTACTTTACGATTTAAAAAGTATAA 44487
90 V R H L V W D A G Y A - L E I E N V Y L S A Y I M V G L A F 118
44488 ACGCTCCGACGTGATGTATGGGGACGCCTG 44517
119 L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44794
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
44795 AAGATTTTAAATAAATCGTTAGTAGAGTTTTTAAATCAAGAGAAATCTGAA---ACTTTGGGATATGCTCTTTTTATATTGTGGACAGCA 44881
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
44882 CCTACATTCGATATTGTAACA---TATGAAACAATTAAGTTACAGATATCTTCT---GAATTACGGAAA---ACCATTATTAATTATCTT 44962
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
44963 TTTTGTGTTAATAATTTAACA---TTAATTAGT---ATT---GGCTATCCTATTAAACGCGACGCTTTGTACAAAGCGTTTACTATAATA 45043
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
45044 CATGATTATATTAATAATATTAGAGCATATGATAGTTTACCTTCTGAGTTATTTACGCGCAAACTTTTGAAAGGTGCTACAATGAAATTA 45133
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
45134 GGTTATTCACAAGGTCAAGAGTTT 45157
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45509
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.12
45510 TTTCATATTAAAAGG---TGGGCTAGACATATCAAA---TATAAAATT---CTGCATAATGGTTTCGATCTTGTT---AGGAAAAATTTC 45587
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
45588 AAAATAACACAAAAATTATTA---TTTCAAGAAATCTTGTATAATGAAACAAAGTTT---TTTGCCAAATTAAAAGCTGCTAATCCTACA 45671
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
45672 CTGGATATCAGAAAATTTAAAATAATTCCTTTAACGATTTTGAAACGTTATTAT---CTTTCTGATAAATATAAT---TTTAAAGAAACA 45755
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
45756 AAGTACTTAGCTCAACAACAG---CAAGCATTTTGTTTGTTCGAGTATTACAAAAACGGTTATATTATTATTCATTCTCATTTCTTTATG 45842
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
45843 AACCCTGTACTTTCTTTTACCTAT 45866
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45764
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
45765 TCGGAGCCGTTTAAAACTTTCGATAAACGAGTACGTATACTTTCAAAACGTTTAAGGACTCTTTTTAGTATAGTATATTTCTTATCCCCA 45854
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
45855 ---ATCTTAGCCAATTTTGAATCGTTTAATTCGTCCAGGGCATCAGATATTAATATTTTCGCTTCGGAAGGTAACACGTTAGCTCTTTTA 45941
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
45942 CCGCTAACAAGAATATATACAGAAAATAGATATTTTTTTTCAGGATTCTTGAGTTGCCTAGCATTTTTGATAAGTTCATTGATTATTAAA 46031
61 Y V V N Q F S G F I F L I A G F F L I L - F L F Y H L F A G 89
46032 ---CGCCCATCCACTTTCATATTAAAAGGTGGGCTAGACATATCAAATATAAAATTCTGCATAATGGTTTCGATCTTGTTAGGAAAAATT 46118
90 V R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L 119
46119 TC-AAAATAACACAAAAATTATTATTT 46144
120 L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 48528
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.11
48529 ATGCTTTTAAATTCTTATTTCAAGATCTATTTCAACCTCTTTAGATCGAGTGCTTTTCATAGTTCCCTCACGTACTTTTTCGCTATCGAT 48618
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
48619 TTTTTTATGTGTTTAATATTGAAGTGGTACTCCAATCTAATTACAATCAAAGCCTTCCATATACCTTCTAGTAATATATTAACA---AAT 48705
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
48706 TAC------AA-GGTTTTAAC---TTCTACACACTATTATAATAGTTTTATTTGTTAAGAATATTAAAATATTTTATGTTCGCT------ 48779
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
48780 CACCACTACTAATAAAATTCAGGTTTGTTTATA---ATCCATAAT---TACTGAGATGTCAATTCATTATGTTATTTAAAATTTTTAATT 48863
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
48864 TTTTTTGTTACCAAAAAGGCATCT 48887
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 55503
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.16
55504 CTGGAGCACAATTAC---TGTAGCCCA---TTAGCTATCTTACGTAATAAAAA-ACAAATTGCTATGA-ATCTTTAATAGCTACATT--- 55582
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
55583 ---GTTTTAGCTTTAGTTTTTACTGTATTCAAATGTATGAGTATGTCATGCTCCTTTTCTATTTCTGAT---GGAATTTATGGTTCAGTT 55666
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
55667 TTTATATGTTAACAGGTTTTCATGGAATTCATGTTCTTATGGTACTATCTTTATTGTGTTCAATTTGTTCGTCTTACAAAGATCATTTAT 55756
61 Y V V - N Q F S G F I F L I A G F F L I L F L - F Y H L F A 88
55757 TATCTAAAGTCATTTAGGATTTG-AAGCTTGGCTTGGTATTGGCATTTCGTTGATGTGTTTGGTTACTTTTATTTGTAATGTGTATGCTT 55845
89 G V R H L - V W D A G Y A L E I E - N V Y L S A Y I M V G L 116
55846 ATGGAAGTAATGCCCTTTAATCTT---TTTAATTTT 55878
117 A F L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 56352
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 36 Length-adjusted: 0.28
56353 TACAGTAACACCAAATGCTATCATGCATTATTAGCTTTAATTTTATTATTCATAACTTCTCATTTCTATTATTTTTAACGATTCAGCTTT 56442
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
56443 CTTAGGATTGCTTATATTTTAGTTTATATGGTGCTATTTGTGTACTATTTTTTATATAATATTACTTCACATTTACGCTC-ATACACGCT 56531
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
56532 TATGCAACGTCAAAATTCCAT---TTTATTATTATTTTAATTTTTATATTTTTAATATAATGACTTTTTTAT---TTAGCGATACAATCT 56615
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
56616 CGAGATTGTATTTTC---TCTAATTATCTTTTAAATGATTAGAAC---TTTTTACCT---CATATTCTTTAAAACACACAACATTATATG 56696
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
56697 TTTTTAAGTATTTTTCTTTTATTA 56720
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 56585
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.14
56586 ATTATCATCGATTACATACTCGTAGAGAAACTAATTTTGTATCCA---AATATATATAAT---ATTAAAATTTTTAATTATTAACTTATA 56669
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
56670 TATTATATTTCAATCAAAAATCTAATTCTAGTAATTTATTAGAAAACCATTTATTTTAAAATAATA---TTTAAT---AAAAAACTAAAT 56753
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
56754 AATGTTATTAC-AAGATAATAACCTTTTCTTTATTCGAATATGCTTTTAAGTTTATATTTTTCTCTTATTATTATATATACAGTAACACC 56842
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
56843 AAATGCTATCATGCATTATTAGCTTTAATTTTATTATTCATAACTTCTCATTTCTATTATTTTTAACGATTCAGCTTTCTTAGGATTGCT 56932
91 R - H L V W D A G Y A L E I - E N V Y L S - A Y I M V G L A 117
56933 TATATTTTAGTTTATATGGTGCTATTTGTGTAC 56965
118 F L L T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 60166
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.17
60167 ATTATATTTACCTTTTGTATTTTAGCTTTTGTTTTATTACATTTAGCCTTATACATCAAT---CTGGTAGTGGTACAT---CTTCAGGGT 60250
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
60251 GGGGCC---GCTCTATTGATGAAATTCTTTTCATCCTTATTATACATTAAAGATTTT---TTTAGT---GTAATTTTATTT---ATAGCC 60328
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
60329 ATAATTATATTC---TTTGTT---CTTTTATACCTAATAGCTAGGTC-ATCCAGATAATT---ATATTCCTGCAATCCTGATCAAACTCT 60408
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
60409 GAGCATATTGTTCAGAATGGTATTTTCTACCTTTTTATGCATCCTTCGATCTATTCTAATAAATTATTA---GGTGTTATTGCCCTTGTT 60495
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
60496 GCTAGTATCATTTCTTATTAATAT 60519
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 60612
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.20
60613 TTGAATTATAATATAACTTTGGTATATATGCTTAGTTGTATTGGCATACAAATTATT---ACT---GGTATTTTTCT-TGTTATGTTTTA 60695
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
60696 ---TTGCTCAAATGCATTTTAGCTTTTTTAAGTGTT------GAGCATTTATGA---GAGATGTCCTTATGGTTGGTTTATCCGATATCT 60773
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
60774 CATGCTAATGGTGCTTCTTTTTTCTTTATTGTAGTATATGCTCATCTTTTTCGCGGTTTGTATTATGGTTCATACTTTTTTCCGCCGATT 60863
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
60864 ATTATGGTGCTCGG-AGTAATTATTTTATTATTAAT---GATTATTACTTCTTTTTAGGATATGTTTTACTTGGGGACAAATGTCTTATT 60949
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
60950 GGGCAGCTACGTTATTACTAATTT 60973
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 61546
Protein: lcl|KC353356.1_cdsid_AGH24306.1 [gene=sdh3] [protein=succinate dehydrogenase subunit 3] [protein_id=AGH24306.1] [location=52548..52934] @ 0
DNA length: 768 Protein length: 128
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
61547 ATCATATTTTCGTTTTTTTTATTAAAATCATAATTAATA---AGATTA---ATATTTTGTAAATTATCAAAAATTAAAGAAATTTTATCA 61630
1 M N L N R P I S P H L T I Y K M Q I T N T L S I F H R M T G 30
61631 AATTTTATAGGTATTATTTTTAAATATGTAATTAA-TTCATGAAAATAAAAAATTTCAC-GTATT-AAT---AAAATTTTTAATATTATT 61714
31 G I L S V V L C F F V I L L K M L N F H L S S Y T I Y S V A 60
61715 ---ATAAAAAATAATATT---GGAAAAAATTTTTTATTTAAAAATATTTTTTTTGTGTTTTTTATTTTTTGGTTTTTTTTTTCATCGGTT 61798
61 Y V V N Q F S G F I F L I A G F F L I L F L F Y H L F A G V 90
61799 TT-CATTTTTTGTGTTTTTTTGGA---GTACTCTCCGGATTTTGTTGTTATAAAGCGTTAAAATTATTTACTTTAATATGCAGGTTTTCA 61884
91 R H L V W D A G Y A L E I E N V Y L S A Y I M V G L A F L L 120
61885 CCATTCTCATAAGTTTATATTGTA 61908
121 T F T V W F I F 128
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 148
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.14
149 ATACATAGCTCCTTGTCCCATATATTACCTGATTCTTCCGA-AATATTATGATAACATATCTTTTACTTAATTCCTTTTTATTGATTAAA 237
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
238 CTTATTTTATTTATTTTAATTAGAATT---TTTCTAATTCCAAATATTTTTTCTAAATATATAATTATTATTTTTTTTAGTATTATTATA 324
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
325 TACATATGTTATAAATATCCTCGTACCAATATATTAATTAAGGAAGATTTATTCGAATATGCTTTAAAAACAACTAAAGAAAAAATGATA 414
61 H N A F L I F I T N I I L L W H V - K S G M E V I I E D Y V 89
415 AATATATGTATCATAACGTTATATATATTTACTTTTGTTATAGGTATATTTTATCTTAGATATATAAATATAACAAAAAAAGTAGACTTA 504
90 H - G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I 118
505 AAAATT 510
119 I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 885
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
886 TTACCTGAATTACTTTTTCATAAATACAAGAAAATGTCTATTTTCATAGATAATATTTTAACAAAAGGTCATTATTTTATATTAATTATT 975
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
976 AGTATTCTATATGATGTTATAAATAATGATTTTATTTTGACTACTATATTTCAAATATTACCTTGGATATTTTTTTATGAACTTTTTCTA 1065
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
1066 AGAATATCTAAATTTGTAGATGACATTTGGATACCATATGATCAAGCATTACATAATTTGATATATAGTAAAAAATTAAAATATATAAAC 1155
61 H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V H 90
1156 GAAGAAACATTAATGATAGATGATGAACCACATGATATGTCTTTTTACCAAGATATAAACGAACATTATATAAAACGAGGTTTTGTTAAA 1245
91 G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5462
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.09
5463 AGGATAGAAGTTGTATCGGAAGTATCCTTAATGAAAACGTCAAAAATAGTAATATTTGGGGGGTATTTAGTATGTTGGGCTTATATATTA 5552
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
5553 ATTATAAGTTATTATAATTATCCTATAGATTTAATTATGAGTAAATATCTTTTATTAAATTTTATGTTATATTTGGTGAAAGAAGAAAAT 5642
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
5643 CCATTTATGGATTTCGATAGCGGTTCACATAATAAAAATCTATTAACAATAGAAAATATTAAAAAGATATT-ATGCAAGATTAT---AAA 5728
61 H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V H 90
5729 AAATATTATACAAAAATGGTCAAAAGAATAATAAAAATAATAATGCAAATGATAATAATAATTTTAATAAATATATGTAAAATTATTACT 5818
91 G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7949
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
7950 AATATACATCGTTTATTTCCCGTATTTGGATTTATATTACTTTCATTATATATTTGGGGTAGGTATATAAGAAATAGATTACCACGAGAA 8039
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
8040 ATACCTTTTGATTTAACATTA---TTACGTTTAATAATGTTAATTATAATATGTAGTAGTTATATATATATAATTTATAGGCTTATTAAA 8126
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
8127 CCTAAAGTACCACCTCAATTTATACTTAATGTT---TTGGTA---TCTATTATAAATACTGTAAAATCTTTT---GACAATTATACG--- 8204
61 H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V H 90
8205 ---AAACAATTTAATCTTATTTCCAATACCTATATAAAAATATTTACCTAT---ATAGCAAATAAAATTAATTATTATAATGTCATTTTA 8288
91 G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9649
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.05
9650 TTGAACCATTTTCTGATCTCTTACTTAAAGATGAAAATGAAAGTAATAAATTTTATAAACAAAAAATGTTATTAATAAAAGATACTTATA 9739
1 M T E K L L Y I I R T K S G S L H W W G Q R G S - - A F L L 28
9740 ATGTTTAACAAATTATTTTTCATATTACAGATATTAATAAAATTTAAATATTATTTCATGATATTTATTGTTTTAACACTAAGTTTATGT 9829
29 V P L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L 58
9830 TTTGCAATTATTATACATTATAATTATAATAAAAATAAAAAACTACTAATTAATAAAAAACAAGAGCTTTCTAAACTATTAGATTATTTA 9919
59 F N H N A F L I F I T N I I L L W H V K S G M E V I I E D - 87
9920 TATATCAAAGATATAAAAATGGAAATATTAGATTTATTTTTATTAAACTTATTTACAATAGGATTGATTTTTTCCTTAAGAAATCTTAAT 10009
88 Y V H G E K T R I I S I F F I R V I A I E I V E Y L Y K C S 117
10010 ATTGGAGCA 10018
118 I I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10705
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.12
10706 ATGCGTTTAATCTTTTTAGGAATATTAATATTATATTATAATTTTTGTTATAGTATGTCATACTATAATTGCATGATAATAACAATACCT 10795
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
10796 TTATTATTAAGTTTTATATTATATGAGCATAGTTATCAA---TATTTAGTGAATTTTAGATATTTATGGATAATAAAAATATTATATTAT 10882
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
10883 ACTAATTTAATATTGGTA---ATATATATATTTATAATAATATATTTGTCAAGGAATACATTA---TATTTTATAACCGATAATATACAT 10966
61 H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V H 90
10967 ATATTCAATTTTGAACTTATTCAAGAATTTAGCCAAAAAGAAAAATACGACTTTTTCATAAAATATTTA---AATTATACCCTGTATATG 11053
91 G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12243
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.09
12244 TATTTACATATTTTATTATTAAGTATAGTTATTATTTATGAGATAATTCATACTAATATGTATTATACTTATTATATGCTTTTTATTACT 12333
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
12334 TACATAATTAATGTAATATATAAATATTATATTTTTGAG---AAAAAAAAAGATTTTATGTTTGATGGCTTGCTTAATAAAAATTTTTAT 12420
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
12421 AATGTACAATATTTTATATTTGCTAATAACAAAAGTACTTTA---AACATGAAAACCAATATAGATTATTTATATTTTATGGAAAAATTA 12507
61 H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V H 90
12508 AAAGAAGAAACTACTATTAAATATATTTTAAATGATTTTGAACAAGTACCAGAAGAGTTAGTCAATAAACAAAT-AAATCAAATGTACTT 12596
91 G E K T R I I S I F F - I R V I A I E I V E Y L Y K C S I I 119
12597 ACG 12599
120 F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12306
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 28 Length-adjusted: 0.23
12307 TATACTTATTATATGCTTTTTATTACTTACATAATTAATGTAATATATAAATATTATATTTTTGAGAAAAAAAAAGATTTTATGTTTGAT 12396
1 M T E K L L Y I I R T K S G S L H W W - G Q R G S A F L L V 29
12397 GGCTTGCTTAATAAAAATTTTTATAATGTACAATATTTTATATTTGCTAATAACAAAAGTACTTTAAACATGAAAACCAAT---ATA--- 12480
30 P L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F 59
12481 GATTATTTATATTTTATGGAAAAATTAAAAGAAGAAACTACTATTAAATATATTTTAAATGATTTTGAACAAGTACCAGAAGAGTTAGTC 12570
60 N H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V 89
12571 AATAAACAAATAAATCAAATGTACTTACGTTTTAGTATAATACTAATATTACTTTTTATGACAATTTTTCTTTATGA-TGTTATTAGATA 12659
90 H G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I I 119
12660 TTC 12662
120 F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12627
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 31 Length-adjusted: 0.26
12628 ATGACAATTTTTCTTTATGATGTTATTAGATATTCTATAATAATAAAAATACTTAATTACAATATATATTCTTTTTTTATTCTATTGCCA 12717
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
12718 TTAATT---TTTATATTATATTCAGCAACTAAAATTTTTACTTTGTCTAATACAGCTGAAATTGATGATTTTACAGAATATGTCTTTAAT 12804
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
12805 AAAAAA---TTCAATATT---ATTTCTTGGATTTTAATATCAATTCATTATTTATA-TTTTTAATAATATTACAACCAAAATTTATTTTT 12887
61 H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V H 90
12888 ATGGAA---ACCGAAATTTTATTTAATCTACCATATAGTATAGTAACTATAACTCAAATA---TATACTTCTCAAGAAAAAATTATGTAT 12971
91 G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13021
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
13022 ATGAAAGAAAATTTAACTTATATCATAAGA---CAAATA---GACTTTGAATATTTAATAACTGATTATATTAAACTTAAAGATTTAAAA 13105
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
13106 ATTTATGTATATATGTTTATAGAAAATTATGTCTATTTAGAACTTTGTATCAATATTTTTATAACAAAATAATAACAGAAGTTGTACAAG 13195
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
13196 ---AAT---TTTCTTTATTGCATCAGTTATATTATTTTA---TG-CGAAATAGTATTGTAATATTAAGTGTTATCCAAACTGTAGTATCT 13275
61 H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V H 90
13276 TTTGTACAA---AAGATT---AAT---TTTATCCTTAAAATTAATCAAGTAGAAGGTATT---TATCTT---ACTGTAAAAATTATTTAT 13350
91 G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15865
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.15
15866 ATGCAAGAATGTAAATGT---ATAATATCAGATAAAGTT---TTAATGAAGATATCAAAGAAAAAGAAAACTATTGTATTTTTAAAAAAA 15949
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
15950 CTATTAATA---GTTTTTTATGATTATGCTATAAATAAAATAAATAAAAAAGAACCTTGGATTTTAGAAAATATCATGGATCGGATTATA 16036
31 L L M Y L L F D V A F F M G Q Q A D P T I V L - F L G R L F 59
16037 ATTAAACAAAGTACAATGGCAGATCTTTACGGAATGACAATAGGAGGTAGTCGTAAATCTATTTCAAATGCGCTCATTGAAAAAATAATT 16126
60 N H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V 89
16127 GAAAAAGGAAAATTTGATATA---AACCTTTCTTATATTCACATATTTTCT---GATATATTATCTAAATATTATAAATATTTTTATAAA 16210
90 H G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I I 119
16211 ACT 16213
120 F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17277
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.03
17278 ATAGCATTTATAATTCTTTTTATGTTAGGTAGACATCTGGGAAGCAAATTGTCTCGGCTTTGCTATTACAATGTCATTTTATCACTTATA 17367
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
17368 ATTGTTTATATTATTTTATTCAT-GTT---TTTTTTATGGTCAAATATAAGCTTTAATTTAGGTTCTTGGGTTTCTGTAGGTACTTTAGA 17453
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
17454 TATTACTACAAATTTATAATGATCCTT---TATCCATTACTTTGGTACATTAATTCCTTTATTACTTTATTAATCTA-ATTTATTCTTAT 17539
61 H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V H 90
17540 GATATTTACATGAAGATCCTA---ATTAGTTAAATTTTTTGCTTA---TTTAG-TTTTTTCTCTTTTTCTATGTTTGT---CTTGTTTTT 17619
91 G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 31322
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.19
31323 TCAATTGAAAATAATATATATTTCATATAGTTTAGTTTTAATTCTTATAGTTTATTTTTTAAACTCGGTATAGCACTTTTCATTTTTGGC 31412
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
31413 TTCCTTTAGTTATACCTATTCTTCTTCTATGTTACCTATTTATTTATTTATTACCAAAAATCCATTATTTTATTTATTATATAAATTACA 31502
31 L L - M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F 59
31503 TCTATAAGTTGAGTTATATTATTTACTACCGATATTATTATCTTATTTATAGGTACTGTCTTTGCTTTAAAGCAACTAATTAAAAAC--- 31589
60 N H N A F L I F I T N I I L L W - H V K S G M E V I I E D Y 88
31590 ATTCCTAGCTTATAG---CGCATTGCAAATACTGCGTTTTTTCTAGCACTATAATGT---ATAATCAACATACTCTTTTTATGCTTTTAT 31673
89 V H G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I 118
31674 TTTTAT 31679
119 I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 31322
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.19
31323 TCAATTGAAAATAATATATATTTCATATAGTTTAGTTTTAATTCTTATAGTTTATTTTTTAAACTCGGTATAGCACTTTTCATTTTTGGC 31412
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
31413 TTCCTTTAGTTATACCTATTCTTCTTCTATGTTACCTATTTATTTATTTATTACCAAAAATCCATTATTTTATTTATTATATAAATTACA 31502
31 L L - M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F 59
31503 TCTATAAGTTGAGTTATATTATTTACTACCGATATTATTATCTTATTTATAGGTACTGTCTTTGCTTTAAAGCAACTAATTAAAAAC--- 31589
60 N H N A F L I F I T N I I L L W - H V K S G M E V I I E D Y 88
31590 ATTCCTAGCTTATAG---CGCATTGCAAATACTGCGTTTTTTCTAGCACTATAATGT---ATAATCAACATACTCTTTTTATGCTTTTAT 31673
89 V H G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I 118
31674 TTTTAT 31679
119 I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 43199
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.04
43200 AAATTTAAACGTTACGTGTTTATTACTAGGTTTCCGACT---AATCTTGAAAAGGAA---GAAAATGGATCTTTATTAATCGGTTCGCCA 43283
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
43284 TTAATACGAAGTGGTATAAACGA-ATTAGACATTTAAAAAGACGATATTTATTAAAAATTATAAGAGCTAAATTTAAGAGACTTTAT--- 43369
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
43370 TA-ATTCTAATCTTAATAATTATTACTTTAAACATATGTATATATATTTTTTTATCAAATTTA---ATAATAGATTAAAAATACTTAGCA 43455
61 H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V H 90
43456 GCTCCTAAA---AAGCTTGTTAT-TTTTTTAGAATAAGGAAAATAATATTTGATATCACGTGCATTTCTTATAAAAAGTCTATCATCAAT 43541
91 G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 55179
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.06
55180 AGATTTGAGCAATATTGTGCTTTATATGAAACTAAACTATTAAGTTTACACATGATAAACCTGAACGAGCTGAATTATTCTATCATTCT- 55268
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
55269 ATGAATATTTATCA-TTCTTTGATAAAGCCGATTTT---GGATTT---GCTGAAATCCATTATTATTTATTTTAA---GAAGTTTTGAAC 55348
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
55349 CGGAATTCTATAAATCCATAAATGCCTAATAAATTATTTTTTTTATAAATCAAATACTTATTATATTAATTGATATTATATAGCTATACT 55438
61 H N A F L I F I T N I I L L W H V K S G M E - V I I E D Y - 88
55439 ATATATAACTTAAAAAAGAGATTAATA---TTTAAAGCAATAAACTTCATATATATTTATATAATAGTAAAATTAAAAAGATTAAAGGGC 55525
89 V H G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I 118
55526 ATTACT 55531
119 I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 977
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
978 TTAAGTAATAGTATAATATATATATATCGTATTTTATTT---ATTATA---TTTTTC---ATTTAT---TCTATATATTATTTGGATCTT 1055
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
1056 TAACAAAACCTCGTTTTATATAATGTTCGTTTATATCTTGGTAAAAAGACATATCAT---GTGGTTCATCATCTATCATTAATGTTTCTT 1142
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
1143 CGTTTATATATTTTAATTTTTTACTATATATCAAATTATGTAATGCTTGATCATATGGTATCCAAATGTCATCTACAAATTTAGATATTC 1232
61 H N A F L I F - - I T N I I L L W H V K S G M E V I I E D Y 88
1233 TTAGAAAAAGTTCATAAAAAAATATCCAAGGTAATATTTGA-AATATAGTA---GTCAAAATA---AAATCATTATTTATAACATCATAT 1315
89 V H G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I 118
1316 AGAATA 1321
119 I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 3385
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.10
3386 GCAATAAAAAAATTCCTTTCTTTTATACGTAATAATATTTCTTCTGTT---TTT---GGATAT---TCTAATAAATATTTAAATCCTAAG 3466
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
3467 CTATCTTTATATTTAGTAAAAGACTGATACGCCTCTTGTGATATTTTAATAACACCTTCTGTATCTATAGTAACTGCCGAAGAATTAATG 3556
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
3557 GATAACAATTTAAGATCATTAATAGATAATGTTTGTGATTTATTTAAAATTTCAAGAGCACGTTCTATATTTGTTATTTCCATAACATAA 3646
61 H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V - 89
3647 TCTTTTGGCAAGTAACATTTAGCTGATTTTTCATTTTGTAAATTAATAGGTAA-AGCACTATT---TTTTTTCAGAGGTGTCAAATAACT 3732
90 H G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I I 119
3733 ACT 3735
120 F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 7840
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.08
7841 TCAAAAGATTTTACAGTATTTATAATAGATACCAAAACATTAAGTATAAATTGAGGTGGTACTTTAGGTTTAATAAGCCTATAAATT--- 7927
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
7928 ATATATATATAACTACTACATATTATAATTAACATTATTAAACGTAATAATGTTAAATCAAAAGGTATTTCTCGTGGTAATCTATTTCTT 8017
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
8018 ATATACCTACCCCAAATATATAATGAAAGTAATATAAATCCAAATACGGGAAATAAACGATGTATATTTTTAATTATTAAA---TTTATT 8104
61 H N A F L I F I - T N I I L L W H V K S G M E V I I E D Y V 89
8105 ATCCTTGAAATAATATCTATCATTTTTTATTTTGTAGTTGAAATAATTGATTTTTCTGTTTTTCAACTTCTTTTT---TTTGCTGTTGTT 8191
90 H G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I I 119
8192 CAA 8194
120 F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 25830
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.12
25831 ATTACTACTTCATTGGTGTTAATCTTACTTCTTCCCTATGCATTATTAGGTCTTGCAGGAATGCAC---GCCGTATTCCAGATTATCCTG 25917
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
25918 ATGCTATTTACATTTTAATTTAATAGTAGTTATGG-TTCTTTTGTTACTTAGTTTCCACTATCATATTCTTTATATTTGGTGT-GTTTTT 26005
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L - G R L F 59
26006 AATTATAATTTATTTATAATGGTTTTCCTTCTATATTTTATATATTAAACCTTTAATCAAAATTACTTTCTTCGTATTAAACAA---ATA 26092
60 N H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V 89
26093 TTCAAGGAAATAATGAATGTCTTAATAGTATTCTAAAGAATTAACATCTTAATTCTTCAT---GTTAAACGCTTGTCTAAATTAAGCGTA 26179
90 H G E K T R I I S I F - F I R V I A I E I V E Y L Y K C S I 118
26180 AATAAC 26185
119 I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 28805
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.12
28806 GTTATCATGCTTTTGCTGTCCCTTTTTAGGTTTAAAAGTGATGCTGTTCCT------GGC---CGTTTAAATCAATATCTTGTTATATCA 28886
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
28887 ACCGTCTGGTATTTACTATGGCCAATGTTTGAATTATGTGGAGTTAATCATGCTTTTATGCATTGCAAATCGTATCCTTTAAATGGGATT 28976
31 L L M Y L L F D V A F F M G - Q Q A D P T I V L F L G R L F 59
28977 AATATAAAAAATTTTTAATGTTTTAACATAAAGAATATTTTTCATAAAAATGTTAAGTCAAGGAAAAGTATATGAAGAAAAGGTTATAAT 29066
60 N H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V 89
29067 TATGC-TATAAGTTTAAATATTTAAATTGCTCTCTAATTAATTTTTTT---ATAAAGATTTACGAATATATTTATGCCATATTAAAAAAC 29152
90 H G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I I 119
29153 TAT 29155
120 F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 28805
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.12
28806 GTTATCATGCTTTTGCTGTCCCTTTTTAGGTTTAAAAGTGATGCTGTTCCT------GGC---CGTTTAAATCAATATCTTGTTATATCA 28886
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
28887 ACCGTCTGGTATTTACTATGGCCAATGTTTGAATTATGTGGAGTTAATCATGCTTTTATGCATTGCAAATCGTATCCTTTAAATGGGATT 28976
31 L L M Y L L F D V A F F M G - Q Q A D P T I V L F L G R L F 59
28977 AATATAAAAAATTTTTAATGTTTTAACATAAAGAATATTTTTCATAAAAATGTTAAGTCAAGGAAAAGTATATGAAGAAAAGGTTATAAT 29066
60 N H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V 89
29067 TATGC-TATAAGTTTAAATATTTAAATTGCTCTCTAATTAATTTTTTT---ATAAAGATTTACGAATATATTTATGCCATATTAAAAAAC 29152
90 H G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I I 119
29153 TAT 29155
120 F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37181
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.06
37182 ACCATTAATATTATAGTTGCTGTGATATCAATTATATTAGCTCTTTTACAGTTTACGTCAAAATGATTTAAAAAGGATTATTGCTACTCA 37271
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
37272 TCTATTGCACATATGAATTTTTTAGTGGGCTATTTTTGTAAAAGATTTATTAGTTTAACAGGTTCTTTATTATTGCAAATGCTCATGGGT 37361
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
37362 TTCTTCTTCCGCTTTATTTTTAGCAATGGAATGTTATATGATGATAT-AAATCACGTAATATTTCTATTATCGTGGTTTGTTACTGTTAT 37450
61 H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V H 90
37451 GCCAATATTTTGTTTCTTCTTTTTTATTTTTTCTTTAGCGAATTTAGGGTTTCTTCTACTGTTAATTTTATTCTGAAATGTTA-ATATTT 37539
91 G E K T R I I S I F F I R V I A I - E I V E Y L Y K C S I I 119
37540 TTT 37542
120 F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44908
Protein: lcl|KC353356.1_cdsid_AGH24307.1 [gene=sdh4] [protein=succinate dehydrogenase subunit 4] [protein_id=AGH24307.1] [location=52960..53322] @ 0
DNA length: 720 Protein length: 120
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.08
44909 TTGGTTCAGAATCTTCTGATATTTATCAGATAGCGATA-AATTCCTTTATTTATAAAATTGAAATTCAACGTAAATTTTTAGAATCCTTC 44997
1 M T E K L L Y I I R T K S G S L H W W G Q R G S A F L L V P 30
44998 TTTTTAAAGATTTTAAATAAATCGTTAGTAGAGTTTTTAAATCAAGAGAAATCTGAAACTTTGGGATATGCTCTTTTTATATTGTGGACA 45087
31 L L M Y L L F D V A F F M G Q Q A D P T I V L F L G R L F N 60
45088 GCACCTACATTCGATATTGTAACATATGAAACAATTAAGTTA---CAGATATCTTCTGAATTACGGAAAACCATTATTAATTATCTTTTT 45174
61 H N A F L I F I T N I I L L W H V K S G M E V I I E D Y V H 90
45175 TGTGTTAATAAT---TTA---ACATTAATTAGTATTGGCTAT---CCTATTAAA---CGCGACGCTTTGTACAAAGCGTTTACTATAATA 45252
91 G E K T R I I S I F F I R V I A I E I V E Y L Y K C S I I F 120
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5693
Protein: lcl|KC353356.1_cdsid_AGH24308.1 [gene=sdh2] [protein=succinate dehydrogenase subunit 2] [protein_id=AGH24308.1] [location=53355..54080] @ 0
DNA length: 1446 Protein length: 241
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 30 Length-adjusted: 0.12
5694 GAAAATATTAAAAAGATATTATGCAAGATTATAAAAAATATTATACAAAAATGGTCAAAAGA-ATAATAAAAATAATAATGCAAATGATA 5782
1 M N T N I K K E K T M L F K I Y R W N P D K K E K P Y I N T 30
5783 ATAATAATTTTAATAAATATATGTAAAATTATTACTTTCAAAGTAAAAGCAGATGAAAAAAATCATCAGGAAGTCTTTGAAAATTTTAGA 5872
31 Y S I D L N S C G P M V L D A L I K I K N E Q D S T L T F R 60
5873 AAAATACTTAAAGAAGGTTTGTTT---AATATATTAGAAAAGTTGGATTGTCTTGAAGATTCACAAACAATGAAGGAAATA---GTA--- 5953
61 R S C R E G I C G S C A M N I D G T N T L A C I K R I D T N 90
5954 GAAACATTTATGGATAATTTAATGCTGGAAGAATTATATATT---AAATACCTTGCAAAAGATGAAAAAGATTATGAAGGTTTTATGAAA 6040
91 K K E M K I Y P L P H M H I I K D L V P D L S N F Y A Q Y K 120
6041 GAAATTCAATCATTATTAAAGGATTATCTTCTAAGACTT---CAAGAAATGAAAAAATTCAAAGAAAATATGAATAAATTCACC---TTA 6124
121 S I E P W M K N T S K K L D K E L Y Q S R N D R E K L D G L 150
6125 CGAATCACTGCAATATATGTAATTAGTAGTATTTTGTTACCTCATTTACCTATAACGTCATTATTTTTAAACAGCATATATATATATCTA 6214
151 Y E C I L C A C C S T S C P S Y W W N S D K Y L G P A I L L 180
6215 TTTGCTAACAAATATTTAAAAGAATTTGAAGAACAAAGTTCGGATAAGAATTTTGAAGTAATTTTTCCTTTAATTTTGAATTATATTTT- 6303
181 Q A Y R W I V D S R D Q A T K E R L Q F L E D P F K L Y R C 210
6304 AACAACATTTTA---TG-ATGAAATACAAAAAAAACAAAAGAAAGATGATTAATAAGAAAACACAAATTCAAAAAAATAATTATTTAATA 6389
211 H T I L N C T K T C P K H L N P A L A I A K I K Q N I T L L 240
6390 ACG 6392
241 T 241
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 201
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 30 Length-adjusted: 0.29
202 ACATATCTTTTACTTAATTCCTTTTTATTGATTAAACTTATTTTATTTATTTTA---ATTAGA---ATTTTTCTAATT---CCAAATATT 282
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
283 TTTTCTAAATATATAATTATTATTTTTTTTAGTATTATTATATACATATGTTATAAATATCCTCGTACCAATATATTA---ATTAAGGAA 369
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
370 GATTTATTCGAATATGCTTTAAAAACAACTAAAGAAAAAATGATAAATATATGTATCATAACGTTATATATATTTACTTTTGTTATAGGT 459
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
460 ATATTTTATCTTAGATATATAAATATAACAAAAAAA 495
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 447
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.18
448 TTTGTTATAGGTATATTT---TATCTTAGATATATAAATATAACAAAAAAAGTAGACTTAAAAATTTATTATATAATGCTAAAAAATCTT 534
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
535 TTTACTGAATTTACAAAAGAAGAAATTATTTTAAATGTGGTAATAATAATAACTTTTATAATAATTTATATTTTTATAATATATAAATTT 624
31 I I M L M S I E L M L - L A I N F N F V V F S V Y L D D L I 59
625 ACTCAATATTTTAAATTACAAGTAATTAAAAGACATCTTTACTTAATAGGAATACCATTAAATAATAATTGGTATTCAACCGTTCATCGA 714
60 G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R 89
715 AAGTATTTATGGCCTTTAGCAAATTCTTTTCTTAAAATA 753
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 918
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
919 ATGTCTATTTTCATAGATAATATTTTAACAAAAGGTCATTAT---TTTATATTAATTATTAGTATTCTATATGATGTTATAAATAATGAT 1005
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
1006 TTTATTTTGACTACTATATTTCAAATATTACCTTGGATATTTTTTTATGAACTTTTTCTAAGAATATCTAAATTTGTAGATGACATTTGG 1095
31 I I M L M S I E L M L L A I N F N - F V V F S V Y L D D L - 58
1096 ATACCATATGATCAAGCATTACATAATTTGATATATAGTAAAAAATTAAAATATATAAACGAAGAAACATTAATGATAGATGATGAACCA 1185
59 I G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A 88
1186 CATGATATGTCTTTTTACCAAGATATAAAC---GAACATTAT 1224
89 R G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 918
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.08
919 ATGTCTATTTTCATAGATAATATTTTAACAAAAGGTCATTAT---TTTATATTAATTATTAGTATTCTATATGATGTTATAAATAATGAT 1005
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
1006 TTTATTTTGACTACTATATTTCAAATATTACCTTGGATATTTTTTTATGAACTTTTTCTAAGAATATCTAAATTTGTAGATGACATTTGG 1095
31 I I M L M S I E L M L L A I N F N - F V V F S V Y L D D L - 58
1096 ATACCATATGATCAAGCATTACATAATTTGATATATAGTAAAAAATTAAAATATATAAACGAAGAAACATTAATGATAGATGATGAACCA 1185
59 I G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A 88
1186 CATGATATGTCTTTTTACCAAGATATAAACGAACATTATATA 1227
89 R G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1301
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.22
1302 TATATTATACTATTACTTAAATTATTATATAATCCTATAATATTTTTTCTGATATATTATGTA---ATAATAATAGGTATACAAATATTA 1388
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
1389 TGGTCATATTATATGCATGTAGAAGTTATCAAAGATAATGATAAT---AATTTATTAAAA---ACATTGCCTTCAATAAAGATTATTCAT 1472
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
1473 AATTATTTT---CTGTATAAAAGTAGTTATTTATATGAAGCTGGTTCAATATGTAAATCTTTATATAAAATAATGCCGACAACTAAATAT 1559
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
1560 TCGGTA---GTTAAAGATATTATTTTGGTGAAATAT 1592
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1814
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
1815 AATCCACCGGATGTTATTAATAAT---GATTTACCTTTTGAAGAACCTGTTGAGGAGCCTATTGAAATAAAAGTAGAATTTTTTAATGCT 1901
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
1902 TATACGGATCTTATGAATATAGAAGATGTAGATAGTGTAATTTCTCCAAGTTTTGAAGGCTCTCGTATTTATAGTGACGATGCAATTTTT 1991
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
1992 CAGTTACATTTAGATATTACTGAATTTGTTACACAAAAAATAAGGGTTTCAACAGAAGATATATCTGTAACAATTATACGAAATACAGTC 2081
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
2082 CATGAATATTTTATAAAAAGTAATTTAAATAGTAAT 2117
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1970
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.12
1971 TATAGTGACGATGCAATTTTTCAGTTACATTTAGATATTACTGAATTTGTTACACAAAAAATAAGGGTTTCAACAGAAGATATATCTGTA 2060
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
2061 ACAATTATACGAAATACAGTCCATGAATATTTTATAAAAAGTAATTTAAATAGTAATCTTACACCGTCTGATTTGCAAAACACTAATCAT 2150
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
2151 TTAATTAATTTATTACTTAAGGAACTAATTGTCAATAGTTTTTTTGCCGCTGACAACGAAAGTTTTATAATGAAACAAATTGCAACATCC 2240
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
2241 CTAATA---GTTGAAGTTTTAAGTAATTTAGAAAAT 2273
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4568
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
4569 ATTGATTATTTTTTAATAATATATTATTATTTATTATTATTTATAGGTCTAATAATGACATCTTGGATAATTTGGAGTAGATTTATTCGA 4658
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
4659 TCTCGTACTATTAGAGAACTACCTGATTCTTTATTAACA---GAATATCGCTTTTGGATTTTA---ATTTATATTTGT---TGCATA--- 4736
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
4737 TATATATATAGTATTAAAAATATTCTGAAGGCTTCAGGAGATAACTATCTTAATTTAAAAGATATTATAGAGATATTGTATGCACCTTTG 4826
61 Q V F A L L V L T V A A A E S A I G L A - I L V I Y Y R A R 89
4827 AAAACTATAGAT---CATGCTATTAAATATAATAAATAT 4862
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4718
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.16
4719 ATTTATATTTGTTGCATATATATATATAGTATTAAAAATATTCTGAAGGCTTCAGGA---GATAAC---TATCTTAATTTAAAAGATATT 4802
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
4803 ATAGAGATATTGTATGCACCTTTGAAAACTATAGATCATGCTATTAAATATAATAAATATATTAAACCTTATTATTACAAA---TTTGTG 4889
31 I - I M L M S I E L M L L A I N F N F V V F S V Y L D D L I 59
4890 AGTAAATTTTATAACTTT---ACTGAAACAAAAAATATAAATGATGACCAGATACAAGTATTTGTCTTTTTTATGCAGATATTTCCTAGA 4976
60 G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R 89
4977 ---ATTATCTTAGTT---TCTATT---TTAATGATAGAT 5006
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5387
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.14
5388 GAAGATTTAGATATTTTGAGAGCCTTATATTGTGAGCTTATGCCAAATATTATTCATTTAAAA---ATGTTTTTATCTAGGATAGAAGTT 5474
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
5475 GTATCGGAAGTATCCTTAATGAAAACGTCAAAAATAGTAATATTTGGGGGGTATTTAGTATGTTGGGCTTATATA------TTAATTATA 5558
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
5559 AGTTATTATAATTATCCTATAGATTTAATTATGAGTAAATATCTTTTATTAAATTTT---ATGTTATATTTGGTGAAAGAAGAAAATCCA 5645
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
5646 TTTATGGATTTCGATAGCGGTTCACATAATAAAAAT 5681
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7233
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.06
7234 AAAGATAATGATTTAATATTTACGAAACACGGGCGAGCGTATTTAGAATTACAGCCAAAAAGTCAAATTTTTATAAAT---CCT---TTA 7317
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
7318 GAAATCACCAAAGAAAATATTACTCTTGATGATTTAAAT---AATTTTTGTATTATTGTACCAAAAAATTATGAGGATGATCTTATA--- 7401
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
7402 AAAGCCTCGCCACATATGATAGCAGCTTATGATCCTACTAATACTCATTTGTACGCATTTTCTACATTTACAAGCGAAAAAGTTGGTCTA 7491
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
7492 AAAGTAAGTGATGAGCAATTTAAAAAATTTCAAATG 7527
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7937
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.08
7938 TTAATAATTAAAAATATACATCGTTTA---TTTCCCGTATTTGGATTTATATTA---CTTTCA---TTATATATTTGGGGTAGGTATATA 8018
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
8019 AGAAATAGATTACCACGA---GAAATACCTTTTGATTTAACATTATTACGTTTAATAATGTTAATTATAATATGTAGTAGTTATATATAT 8105
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
8106 ATAATTTATAGGCTTATTAAACCTAAAGTACCACCT---CAATTTATACTTAATGTTTTGGTATCTATTATAAATACTGTAAAATCTTTT 8192
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
8193 GACAATTATACGAAACAATTTAATCTTATTTCCAAT 8228
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8199
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
8200 ATACGAAACAATTTAATCTTATTT---CCAATACCTAT-ATAAAAATATTTACCTATATAGCAAATAAA---ATTAATTATTATAATGTC 8282
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
8283 ATTTTATGG---GAAAAAATCTTACTTATTATAAATACTGTACCGCATATCATTTTACTTTCTGCTCTATTCATAGATACTTTTTATTTA 8369
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L - I 59
8370 GGTAAATTATTTTATTTTTATAAAGTCATTTGGGTTACATTATTCTTTTTCTTAATCCCATTTAGTTTATATTCTTTTGACTATGTTTGT 8459
60 G Q V F A L L - V L T V A A A E S A I G L A I L V I Y Y R A 88
8460 GAACACTATATAAATTATTGGGAAAAAAATTCTGAAAATGTA 8501
89 R G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8445
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.13
8446 TTGACTATG---TTTGTGAACACTATATAAATT---ATTGGGAAAAAAATTCTGAAAATGTATGGACAACATATAAACCAAATGTCTTAC 8529
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
8530 CTCCTGAATTAGATTTTTGGCATCCTGATTATAATGAGGATGATGATGATGAATGTATTCCGCCTAATGATATGG---AGATCTCTTTTA 8616
31 I I M - L M S I E L M L L A I N F N F V V F S V Y L D D L I 59
8617 GAACATTTATTC---CTACTTATTTTG---ATGAGATATATTACGAGCAAAAAACACCTCATTTTTATTATATTATACGTCCAACAATAG 8700
60 G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R 89
8701 AATGGTATAATAATTTATTTAAAGAATATAATGTTACCT 8739
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8706
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.05
8707 ATAATAATTTATTTA---AAGAATATAATGTTACCTGGAAATCTTGTGGAGATATA-AAAAACACCATTATCGAAAAGGATCTTAATTTA 8792
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
8793 ATAATTAGATTAAAAAGTATT---ATAACAACACATGAGATAATTACTAAATGGACAAATGTACAACAAAATATAAAAAAT---ATTAGA 8876
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
8877 ATTATAATATATATAGGATATTTAATATGCTGGGCTTATATATTATACGTAAGTTTATCAAATTTTAAAGATTTTTATATGTTATCATGT 8966
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
8967 ATAATTGAAGTGATAAAAACTCATCTTCTACAAGGT 9002
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9174
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.07
9175 ATATACATTCCAAAAATATCAGGAGTTACTCTACCCGAATATCCTTTAAAAGATGTTCAAAAAGCTAATTTTATCCAGTTCTTTAATAGT 9264
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
9265 ATAGTTAAAAATGACCCAATATGGGATAATTTATGTCAA---ACATATAATAAAGTAAATTCTTCATTTTTTTATCAAAAAATTAAAGAT 9351
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
9352 GCTTATATTAACTTAACTTTACAAACAGCTCATTATAAAGAACAAATAGCTATTTATTTATCATTTATCTTAAAATTGATTGAAATGCAC 9441
61 Q V F A L L V L T V A A A E S - A I G L A I L V I Y Y R A R 89
9442 CCTCAAATACCTATTAAAGATATGTGCTTA---AAAGCA 9477
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9790
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.14
9791 TATTTCATGATATTTATT---GTTTTAACACTAAGTTTATGTTTTGCAATTATTATACATTATAATTATAATAAAAATAAAAAACTACTA 9877
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
9878 ATTAATAAAAAACAAGAGCTTTCTAAACTATTAGATTATTTATATATCAAAGATATAAAAATGGAAATA---TTAGATTTATTTTTATTA 9964
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
9965 AACTTATTTACAATAGGA---TTGATTTTTTCCTTAAGAAATCTTAATATTGGAGCAACCATAAATATTTTCTTATTTCGACCAAGTCTT 10051
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
10052 GTAATATTATCGCAAATTATTTCACTTTGTGTATTA 10087
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9793
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.12
9794 TTCATGATA---TTTATT---GTTTTAACACTAAGTTTATGTTTTGCAATTATTATACATTATAATTATAATAAAAATAAAAAACTACTA 9877
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
9878 ATTAATAAAAAACAAGAGCTTTCTAAACTATTAGATTATTTATATATCAAAGATATAAAAATGGAAATA---TTAGATTTATTTTTATTA 9964
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
9965 AACTTATTTACAATAGGA---TTGATTTTTTCCTTAAGAAATCTTAATATTGGAGCAACCATAAATATTTTCTTATTTCGACCAAGTCTT 10051
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
10052 GTAATATTATCGCAAATTATTTCACTTTGTGTATTA 10087
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10196
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.07
10197 GTGGATATCGATTCTATGAACTTTTATACGATAACTTACATGATTTTATTTATATT-AAACTAAAACCAATTAATAAAATAAACTCTTCT 10285
1 M T I D L V R Y L T V P - M I L F I I G L S G I - F L N R K 28
10286 TATTTACAAGTGCTAATGATAATACTATGCAATAAGATCTTGTACATATATGCTTATATAAAAAATATCTTCTATATT---TTACGAGCA 10372
29 N I - I I M L M S I E L M L L A I N F N F V V F S V Y L D D 57
10373 TTTTTTCCTGAAATTTTATTATTTATAAGTTTGATATCTGATTTAAATAATAGAGAAATAAAAACATTTTATTATATCTTAGCTATATAC 10462
58 L I G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R 87
10463 CCATTAATGACA---TCTTATAGGACCATTAAAGAAATTCTAGGA 10504
88 A R G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10666
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 28 Length-adjusted: 0.27
10667 ATATTAAGAGATTTCAAAAGAATATATCAGCCATATAGTATGCGTTTAATCTTTTTAGGAATATTAATATTATATTATAATTTT---TGT 10753
1 M T I D L V R - Y L T V P M I L F I I G L S G I F L N R K N 29
10754 TATAGTATGTCATACTATAATTGCATGATAATAACAATACCTTTATTATTAAGTTTTATATTATATGAGCATAGTTATCAATATTTAGTG 10843
30 I I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I 59
10844 AATTTTAGATATTTATGGATAATAAAAATATTATATTATACTAATTTAATATTGGTAATATATATATTTATAATAATATATTTGTCAAGG 10933
60 G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R 89
10934 AATACATTATATTTTATAACCGATAATATACATATATTC 10972
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11555
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
11556 CTAATTTTAATTATAGTGTTATTTTTAACAATTAAAATAATATCTTTTATTAAAAAT---AAAAGG---TAT---CCAAAATTATCTGTG 11636
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
11637 AATGAATATAAAAAATCTCCTGAATTATTATTAGAATATTTAAAT---AAATATTATGTAACTAACATTTATTATAGTATTTTTAA-AAT 11722
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
11723 AA-TTATATATGTTTTTTAAATTAAGTATTATTTTTTATTTACGTTATTTATATTTAGGTCAAAATTTTATGTTATATAAGTCAGAAAAT 11811
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
11812 AGTATT---ATATATCTCTCTTCATTTAGTCGATTG 11844
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11730
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.05
11731 ATGTTTTTTAAATTAAGTATTATTTTTTATTTACGTTAT---TTATATTTA---GGTCAAAATTTTATGTTATATAAGTCAGAAAATAGT 11814
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
11815 ATTATATATCTCTCTTCATTTAGTCGATTGTTATTTATGAGCATTTTAATTATAATTGTTATTTATAATTTTTATAAACTTTTGGATATT 11904
31 I I M L M S I - E L M L L A I N F N F V V F S V Y - L D D L 58
11905 ATTTTTTTTGATGAAATTTTAAAACTATATCTCTATTTTTTTAGGCATAAATTTAATGACAAAATGCGACTTTTTGTAATAGCATATTCT 11994
59 I G Q V F A L - L V L T V A A A E S A I G L A I L V I Y Y R 87
11995 ATAAGAAAT---ATTTGG---GGACCTATTTATTTATTTTTTGAT 12033
88 A R G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12055
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.25
12056 TTCCTGATGAATATTATTATGATGATCATTATATATATGATTGGATTTATAATTATACTTTT-GTTACAAAATTATCACTAAATTTATTT 12144
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
12145 ATATATCAAAACACTTTTATGATACATTTATTTTTTAAATGTAGTAAGAAAATGTTTCGTTTGTTATATATTCATTTACATTTTGATGCC 12234
31 I I M - L M S I E L M L L A I N F N F V V F S V Y L D - D L 58
12235 TTTGGCAAATATTTACATATTTTATTATTAAGTATAGTTATTATTTATGAGATAATTCATACTAATATGTATTATACTTATTATATGCTT 12324
59 I G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A 88
12325 TTTATTACTTACATAATTAATGTAATATATAAATATTATATT 12366
89 R G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12522
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.20
12523 ATTAAATATATTTTAAATGATTTTGAACAAGTACCAGAAGAGTTAGTCAATAAACAAATAAATCAAATGTACTTA---CGTTTTAGTATA 12609
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
12610 ATACTAATATTACTTTTTATGACAATTTTTCTTTATGATGTTATTAGATATTCTATAATAATAAAAATA---CTTAATTACAATATATAT 12696
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
12697 TCTTTTTTTATTCTATTGCCATTA---ATTTTTATATTATATTCAGCAACTAAAATTTTTACTTTGTCTAA-TAC---AG-CTGAAATTG 12778
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
12779 ATGATT---TTACAGAATATGTCTTTAATAAAAAAT 12811
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12657
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.05
12658 TATTCTATA---ATAATAAAAATACTTAATTACAATATATATTCTTTTTTTATTCTATTGCCATTAATTTTTATATTATATTCAGCAACT 12744
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
12745 AAAATTTTTACTTTGTCTAATACAGCTGAAATTGATGATTTTACAGAATATGTCTTTAATAAAAAATTCAATATTAT-TTCTTGGATTTT 12833
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
12834 AATATCAATTCATTATTTATATTTTTAATAATATTACAACCAAAATTTATTTTTATGGAAACCGAAATTTTATTTAATCTACCATATAGT 12923
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
12924 ATAGTAACTATAACTCAAATATATACTTCTCAAGAA 12959
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13095
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.11
13096 AGATTTAAAAATTTATGTATATATGTTTATAGAAAATTATGTCTATTTAGAACT---TTGTATCAATATTTTTATAACAAAATAATAACA 13182
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R - K N 29
13183 GAAGTTGTACAAGAATTTTCTTTATTGCATCAGTTATATTATTTTATGCGAAATAGTATTGTAATATTAAGTGTTATCCAAACTGTAGTA 13272
30 I I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I 59
13273 TCTTTTGTACAAAAGATTAATTTTATCCTTAAAATTAATCAAGTAGAAGGT---ATTTATCTTACTGTAAAAATTATTTATGAAAAAGGT 13359
60 G Q V F A L - L V L T V A A A E S A I G L A I L V I Y Y R A 88
13360 TTGCTTAATAAGATGACTGAAACACAATTAAAAACATTATTAGAT 13404
89 R G T I A V E - Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14917
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
14918 AGTACTAAAGACTTAGCT---ATTTTAGCTAAAGAGATAAATGCTGCTAAACTACTTTTAAATTGCTATTATAAAGTAGTTGCTCAAAAA 15004
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
15005 TTTTATAATGCTCATTTTATAAAAGATGCCATAATTTATCAACATTTTGAATATTTTTATCTTCCAATAGAAATAAGCGGT---GTTGGT 15091
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
15092 CGCATACTAACAGTGTCACATATT---TTAAGTTTTCAAACTAACAAGTTTGCAAGACCATTTCTTAATTATTTCATAAAAAATAAAATT 15178
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
15179 ACTATGGATTTCGAAATATATGATAAAATGAAAGCA 15214
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15019
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
15020 TTTATAAAAGATGCCATAATTTATCAACATTTTGAATATTTTTATCTTCCAATAGAAATAAGCGGTGTTGGTCGCATACTAACAGTGTCA 15109
1 M T I D L V R Y L T V P M I L F I I G L S G I - F L N R K N 29
15110 CATATTTTAAGTTTTCAAACTAACAAGTTTGCAAGACCATTTCTTAATTAT---TTCATAAAAAATAAAATTACTATGGATTTCGAAATA 15196
30 I I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I 59
15197 TATGATAAAATGAAAGCACTTTTTGCAAATTATCTTTCAGCAGATTCTACATTACAAAATATGAGCTTTGATTTATTTGAAAAACAAACT 15286
60 G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R 89
15287 AAAGATTTACAGGATGAACATTTAGCAAGCTTTTTCAAT 15325
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16559
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.22
16560 CTTATTATTATACTCAAAATTATGATTGTTTTGGAATTAATTATAGTTTTATTGTCTTTTTGAAAATTCAGTTAAAATTAAATTATAAAA 16649
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
16650 CTTGTTATACTCATGAATTATTTCCTTCTCTTTTTAAAATTCTCAATACAACAGATCCTCATTATCTCACATTTGCACAGCTTCTCTTTG 16739
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
16740 ATCTTAATAAATCTCCTAACGATGATAATTATTGGGATGGTATCATTACAAGTCCTTATTTTGTTAAATTTTAATTATAGAGGTTTTTAT 16829
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
16830 AATAACTTTGTTTTTTCAATT---ATTAATCTGGGT 16862
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16850
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
16851 ATTAATCTGGGTATTTTTGA-TTCCTTACTATTTCTTTCTCTATTTATACT---TCTATAGCT---ATATTTTGCTACCTAAAGTCCCTT 16933
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
16934 TTAAGAGAGGTATTAAGCGGTGCATTAGTTTTGTTCTCAATAAAACTTCCAAATAAAATTCGTTATTATAGACATCCTAACAC-ATAGTA 17022
31 I I M L M S I E L M L L A I N F - N F V V F S V Y L D D L I 59
17023 AAGGTTCATCTGTTAATCCTAGCAAGCCC-TTAAATTCATCTGAAAATCTTTATGA-TTATCCATATTTTCAATATCTTATAACGGCTAG 17110
60 G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A - 88
17111 TGAGGTGTTATATATTCCAGAAGCTTGGACTTATTCAAAAAC 17152
89 R G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17453
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.07
17454 TATTACTACAAATTTATAATGATCCTT---TATCCATTACTTTGGTACATTAA-TTCCTTTAT---TACTTTATTAATCTAATTTATTCT 17536
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
17537 TATGATATTTACATGAAGATCCTAATTAGTTAAATTTTTTGCTTATTTAGTTTTTTCTCTTTTTCTATGTTTGTC------TTGTTTTTG 17620
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
17621 CTGGTAATTACTTATTATGTTTTTAGGATGGGAAGCTGTGGATTAGCTTCTTATTTCTTATTAATTTCTGGATACAAGAAATCAAGCAAT 17710
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
17711 CAGTCTGCTATTAAAGCAATTATTTTTAATCGTGAG 17746
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17453
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.07
17454 TATTACTACAAATTTATAATGATCCTT---TATCCATTACTTTGGTACATTAA-TTCCTTTAT---TACTTTATTAATCTAATTTATTCT 17536
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
17537 TATGATATTTACATGAAGATCCTAATTAGTTAAATTTTTTGCTTATTTAGTTTTTTCTCTTTTTCTATGTTTGTC------TTGTTTTTG 17620
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
17621 CTGGTAATTACTTATTATGTTTTTAGGATGGGAAGCTGTGGATTAGCTTCTTATTTCTTATTAATTTCTGGATACAAGAAATCAAGCAAT 17710
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
17711 CAGTCTGCTATTAAAGCAATTATTTTTAATCGTGAG 17746
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 21646
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
21647 ATGAATATAAGATATATTTCCATAAAATTATAAGAAAACATTATATTAATTATC---TTAGTTAAAATATTTATTTTAATAAAGTAATAG 21733
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
21734 TTTACATATAAAATGGTACTTTTTCTCAATATATTAAAAATATCGTCAAACAAAACAATT---CCGATCATCACACCTCATTTTGAAGGA 21820
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
21821 GTCCTTTTAAATATGTACTTGCATGGAGTAGGAACAGTTAAACCAAGA---AACCTAATTCTGCAAACGCAAAATTACAAAAGTTTGTTA 21907
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
21908 ACTAATGGTGTTAT-TTAATTGCTTATATACCAGGA 21942
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24442
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.09
24443 AACAAATTTACTTTCCTATCAGATTTATCAATTTATCAAATTTCA---ATTATATCATTGGTACAATTTTATCATACACATTATAATTAT 24529
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
24530 AAAATTATAATA---AGTTATGGTTTTCTTTTAGTGCACAATAGTTTTCAT---ATTTTCAAATCGCACCGTTTAGGTTTTATTGTTATC 24613
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
24614 TTCTATTATAAATTATATTTCTTTTTGTGCACTAGACTTGGTAGTTTATTAGTTTATTTTATTATTATTATCTTTTGGAATATTGTTTTT 24703
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
24704 ACTATCCCTATTGTTTGTGCAGACGATAATTTTGTA 24739
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24512
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.15
24513 ATACACATTATAATTATAAAATTATAATAAGTT---ATGGTTTTCTTTTAGTGCACAATAGTTTTCATATTTTCAAATCGCACCGTTTAG 24599
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
24600 GTTTTATTGTTATCTTCTATTATAAATTATATTTCTTTTTGTGCACTAGACTTGGTAGTTTATTAGTTTATTTTATTATTATTATCTTTT 24689
31 I I M L M S I E L M L L A I N F N F V V F - S V Y L D D L I 59
24690 GGAATATTGTTTTTACTATCCCTATTGTTTGTGCAGACGATAATTTTGTATATA---TTGACGATCGTTCTGTATCATTATATGATCAGA 24776
60 G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R 89
24777 TGAATGATCCGAATTATAGGCCAGACTGCTATATTGTATGTG 24818
90 G T I - A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24965
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.08
24966 ATGAATTGGTTGATACTACTTCATCTTCATCTGAATCTTCTGCTTCTACTTCATCAGCTTCTT---CTTTTGCTTCATCATCTGAATCTT 25052
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
25053 CTTCTAGTACTGAC-TCTGAAGAAGAGTTGGATCTAAAAGATCAGGTGAATCTCTCTTTG---CAATTCTTTTTTGAGGATTTTAAAAAC 25138
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
25139 ACTGTAGCAACAAT-TTATC-TTGGCCATCCTCAGTATTATGAGCAATGTCTCAATTTTGTGGCTACAAAATTACCTGAAACTGTATGGG 25226
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
25227 CAAAATCTGAGCAGGAACTTTCTTCTTCTACTTCTG 25262
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 25160
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.08
25161 GCCATCCTCAGTATTATGAGCAATGTCTCAATTTTGTGGCTACAAAATTACCTGAAACTGTATGGGCAAAATCTGAGCAGG---AACTTT 25247
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
25248 CTTCTTCTACTTCTGAA-ATTAGTCTTTTACTGGATGCTATTAATTATCAA---GTAGAACGAACT---CATCCTGAAGATCTC---CAT 25327
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
25328 ACAGTACTTGCACTTAAATCC---TCAATTATGACTTATAATGTTTGTAACCTTCTTAATAAACTAGATGATCCAGAAGTAGTTGAAAAG 25414
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
25415 GTTTTTGAACATACTAATTTTGAATTAGCTAAAGAT 25450
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 31203
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
31204 AGCAGGTTTAAAATATTTCTATTTGGATCTATAGCAGTTCTTTA-TATTTATTTGGTACCTCTAAC---TTTATTTATATACAGGATCTG 31289
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
31290 TTAATTTTGATAGTATAGTGCTCTTTCTTATTTTCAATTGAAAATAATATATATTTCATATAGTTTAGTTTTAATTCTTATAGTTTATTT 31379
31 I I M L M - S I E L M L L A I N F N F V V F S V Y L D D L I 59
31380 TTTAAACTCGGTATAGCACTTTTCATTTTTGGCTTCCT-TTAGTTATACCTATTCTTCTTCTATGTTACCTATTTATTTATTTATTACCA 31468
60 G Q V - F A L L V L T V A A A E S A I G L A I L V I Y Y R A 88
31469 AAAATCCATTATTTTATTTATTATATAAATTACATCTATAAG 31510
89 R G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34265
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.21
34266 ATCGCAGTTGCCACGGTTTTATACTACAATGCTTTTATATACATCCTTACCATCTCTTTGATATACTTATATGCTTCTTTATCTCGCGAG 34355
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N - R K N 29
34356 GATATAAGAGTCTTTTTAAGCATATCACTTTCTAAGATTACCTGTAAATTGTATATTGCCCCATATAGGTCATCG---TCAAATATACAT 34442
30 I I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I 59
34443 AATTCGGTATTCTGCATACTTGTGAATAATGCTGTAACATCTGAAAGTATAAA-GCCTTATCTATCTTTAAAGACTCCCTCCTATTAAAG 34531
60 G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R 89
34532 AAGTCGCAGATAAAACATCCACACTCTTTATTAGTTGGT 34570
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34274
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.18
34275 GCCACGGTTTTATACTACAATGCTTTTATATACATCCTTACCATCTCTTTGATATACTTATATGCTTCT---TTATCTCGCGAGGATATA 34361
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
34362 AGAGTCTTTTTA---AGCATATCACTTTCTAAGATTACCTGTAAATTGTATATTGCCCCATATAGGTCATCG---TCAAATATACATAAT 34445
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
34446 TCGGTATTCTGCATACTTGTGAATAATGCTGTAACATCTGAAAGTATAAA-GCCTTATCTATCTTTAAAGACTCCCTCCTATTAAAGAAG 34534
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
34535 TCGCAGATAAAACATCCACACTCTTTATTAGTTGGT 34570
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 35771
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.26
35772 TTAACGAAAAAGCTTAATGATAAC---ACTTTATCTCTTTC-TTTTATGTTATAATATTTGCTCTTATGATCATAACCTTAAACCAAATC 35857
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
35858 TGCTTTTCGTATTTTTGCATTAGAAATTATTTATTAGGTGTTAATATAACTTTATAATGGCTCTTTAGTGTT------GATGATTTTTTA 35941
31 I I M L M S I E L M L L A I N F N F - V V F S V Y L D D L I 59
35942 GGTAA-ATATATAGTATGATATTATTTTCAGTGCT-GCTCTTGATACAAGTAT-GGTTTAATTTTACTATTAAATTATTATGGATCCACA 36028
60 G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R 89
36029 ATATAACTCGTATTACAGCGAATATAAAGGTTAAATAAA 36067
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45295
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.14
45296 TCATATATCAGATTTTTAAAATTCTTAGTTATTAAACTTTCTATTAAGATTTTTGCATATAAT---ATATTTTTATTTTTTTTTTTACAT 45382
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
45383 GTGATTTTAACCATGATAATTTATTTAATACA-TTATTTGTTGGGTAC---TATGTTAAATTTGTATTTTCTTTACAAAAGCTT------ 45462
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
45463 AGGATATATTGTTCTATAGTGGTAATATTTTCCTTTATCCCGAACGT-ATAGGTAAAAGAAAGTACAGGGTTCATAAAGAAATGAGAATG 45551
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
45552 AATAATAATATAACCGTTTTTGTAATACTCGAACAA 45587
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45295
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.14
45296 TCATATATCAGATTTTTAAAATTCTTAGTTATTAAACTTTCTATTAAGATTTTTGCATATAAT---ATATTTTTATTTTTTTTTTTACAT 45382
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
45383 GTGATTTTAACCATGATAATTTATTTAATACA-TTATTTGTTGGGTAC---TATGTTAAATTTGTATTTTCTTTACAAAAGCTT------ 45462
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
45463 AGGATATATTGTTCTATAGTGGTAATATTTTCCTTTATCCCGAACGT-ATAGGTAAAAGAAAGTACAGGGTTCATAAAGAAATGAGAATG 45551
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
45552 AATAATAATATAACCGTTTTTGTAATACTCGAACAA 45587
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46488
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.06
46489 ATAATAATCCTATTAATAATATTTAAAATTATGATATCTACATTACCAATTTATAAAAT-TCGAAAGCATTTAGATATAAAAAAATGATA 46577
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
46578 AATAACATAAAGAGTATTTTAAATAATTTAAAACTGTTCGTAGGAACAAAATATCTTTTAAAAAGCGTACTTATATTTATATTTATTGCT 46667
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
46668 GGCTTATATTATTTTTTTACT---AAGTATACAGGAGCAACACCAGCGATTCCAGTAACTCAAATGCCTTCAATACTCAATCCTACTCAT 46754
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
46755 ATTGCATATATTCAACAATTAGAAGCTTTTCAAGCA 46790
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53552
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 32 Length-adjusted: 0.31
53553 ATTAAAATAAATATGCTTAATTTTTTAATTGGTATTTTAATAATATTCTTTGCAAAA---GAATTCATAATTTTAAATCAAGAA---ATT 53636
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
53637 ATTATTTATTCTATATTTCTATCAATTTTATTTTTTTGTATAAAA---TCTTTTGCTTCATTGGATACAATATTTGAAAATATTCGCTCT 53723
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
53724 AATGAAAAATCCAATTTAAATCTTAAT---TCTAAAAACGAGAAAAATTTTAATGATACATTAAATCAACGTTATCTTTTGAATTCAGCT 53810
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
53811 TTAAGTCCAATATATAAACTTAATTTACCTTCGCAT 53846
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53552
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 32 Length-adjusted: 0.31
53553 ATTAAAATAAATATGCTTAATTTTTTAATTGGTATTTTAATAATATTCTTTGCAAAA---GAATTCATAATTTTAAATCAAGAA---ATT 53636
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
53637 ATTATTTATTCTATATTTCTATCAATTTTATTTTTTTGTATAAAA---TCTTTTGCTTCATTGGATACAATATTTGAAAATATTCGCTCT 53723
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
53724 AATGAAAAATCCAATTTAAATCTTAAT---TCTAAAAACGAGAAAAATTTTAATGATACATTAAATCAACGTTATCTTTTGAATTCAGCT 53810
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
53811 TTAAGTCCAATATATAAACTTAATTTACCTTCGCAT 53846
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 54405
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
54406 GAAGATATTGATCTTATTGTGTGTATGTTGGAATTGGTCAAAAAAAAAGTTCTATTTGAATATTCAAACTTACTTCAAAATAATAAAGCG 54495
1 M T I D L - V R Y L T V P M I L F I I G L S G I F L N R K N 29
54496 CTCATTATACTACTATTGTTGCTGCAACGCTGCACAAAGTGCCTCTCTTCAGTTTATTGCTCCATATACAGGATGTGCATTGCTGAATTT 54585
30 I I I M L M S I E L M L L A I N F N F V - V F S V Y L D D L 58
54586 TATCGTGATAAGGTGAACATGCTTAA-TTATTTATGATGATTTAACAAAACATGCTGCTGCTTATGACAATTATCTTTATATTAAGACGC 54674
59 I G Q V F A L L V L T V A A - A E S A I G L A I L V I Y Y R 87
54675 CCACCAGGACGTGAAGCTTTC---CAGGTGATGTTTTTATGCTCA 54716
88 A R G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61693
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.05
61694 AAAAAAATATTTTTAAATAAAAAATTT---TTTCCAATATTATTTTTTATAATAATATTAAAA---ATTTTATTAATACGTGAAATTTTT 61777
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
61778 TATTTTCATGAATTAATTACATATTTAAAAATAATACCTATAAAATTTGATAAAATTTCTTTA---ATTTTT---GATAATTTA------ 61855
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
61856 CAAAATATTAATCTTATTAATTATGATTTTAATAAAAAAAACGAAAATATGATTTTATATCAATATGCTATAATTTTCCCTATGATTTAT 61945
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
61946 AAGGGAAATACAAAAAATTTTATTTGTAAAAAAATT 61981
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 159
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.08
160 ACAAAAGTAAATATATATAACGTTATGATACATATATTTATCATTTTTTCTTTAGTTGTTTTTAAAGCATATTCGAATAAATCTTCCTTA 249
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
250 ATTAATATATTGGTACGAGGATATTTATAACATATGTATATAATAATACTAAAAAAAATAATAATT---ATATATTTAGAAAAAATATTT 336
31 I I M L M S I E L - M L L A I N F N F V V F S V Y L D D L I 59
337 GGA---ATTAGAAAAATTCTAATT---AAAATAAATAAAATA---AGTTTAATCAATAAAAAGGAATTAAGTAAAAGATATGT-TATCAT 416
60 G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R 89
417 AAT---ATTTCGGAAGAATCAGGTAATATATGGGACAAG 452
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 1099
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.05
1100 ATGACCATAATATTTGTATACCTATTATTATTACATAATATATCAGAAAAAATA---TTATA-GGATTATATAATAATTTAAGTAATAGT 1185
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
1186 ATAATATATATATATCGTATTTTATTTATTATATTTTTCATT---TATTCTATATATTATTTGGATCTTTAACAAAACCTCGTTTTATAT 1272
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
1273 AATGTTCGTTTATATCTTGGTAAAAAGACATATCATGTGGTTCATCATCTATCATTAATGTTTCTTCGTTTATATATTTTAATTTTTTAC 1362
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
1363 TATATATCA---AATTATGTAATGCTTGATCATATG 1395
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 6171
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 29 Length-adjusted: 0.28
6172 ATGACTATCGGCTTACAAAGATACAGAAAGCTATTTATTTTTTTATTAAGTATTAAAGTTCGC---ATCATACTTACTCGTTATTAAATA 6258
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
6259 ATTATTTTTTTG---AATTTGTGTTTTCTTATTAATCATCTTTCTTTTGTTTTTTTTGTATTTCATCATAAAATGTTGTTAAAATATAAT 6345
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
6346 TCAAAATTAAAGGAAAAATTACTTCAAAATTCTTATCCGAACTTTGTTCTTCAAATT---CTTTTAAATATTTGTTA-GCAAATAGATAT 6431
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
6432 ATATATATGCTGTTTAAAAATAATGACGTTATAGGT 6467
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 6830
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.04
6831 TTGGTTAATTCTTCCATACTTGTTTTTTCAGTAATATTAGTAGTATATATAACACCG---TCTGGA---TTTTTTAAT---TCAGGAATT 6911
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
6912 GGTTTTACGCTTGAAGAAGTA---TTATCTATTTTAGAGAAATCATTTAAAACAGTAGTAGACGGGGTATGTTGGGTATCATTAGTAATA 6998
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
6999 CCAAAATGCAATGGAGGTATTGGAAATGTAGGATCACTAAGATTTATATTTTGATTTTCGTGACTTATTGTGTTATTTATACTCTCAGGC 7088
61 Q V F A L L V L T V A A A E S A I G L A - I L V I Y Y R A R 89
7089 AATGGTATTTGGTTAGAGGCAATTGATAATGAATCTTTT 7127
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 7744
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
7745 ATTTCTCGTGGTAATCTATTTCTTATATACCTACCCCAAATATATAATGAAAGTAATATAAATCCAAATACGGGAAATAAACGATGTATA 7834
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
7835 TTTTTAATTATTAAATTTATTATCCTTGAAATAATATCTATCATTTTTTATTTTGTAGTT---GAAATA---ATTGATTTTTCTGTTTTT 7918
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
7919 CAACTTCTTTTTTTTGCTGTTGTTCAAGAGTCATAGGGTGTTTAGGTTTTTTTTTTTGAGCTTCTTTGTCAACATCTTTGCACATAT--- 8005
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
8006 TTAATAATTGTTCATTTGATATTGTTTGTGGCATAT 8041
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 8543
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.08
8544 ACATTTGTCCATTTAGTAATTATCTCATGTGTTGTTATAATACTTTTTAATCTAATTATTAAATTAAGATCCTTTTCGATAATGGTGTTT 8633
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
8634 TTTATATCTCCACAAGATTTCCAGGTAACATTATATTCTTTAAATAAATTATT-ATACCATTCTATTGTTGGACGTATAATATAATAAAA 8722
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
8723 ATGAGGTGTTTTTTGCTCGTAATATATCTCATCAAAATAAGTAGGAATAAATGTTCTAAAAGAGATCTCCATATCATTAGGCGGAATACA 8812
61 - Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R 89
8813 TTCATCATCATCATCCTCATTATAATCAGGATGCCAAAA 8851
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 8624
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.23
8625 CAGCATATTAAATATCCTATATATATTATAATT---CTAATATTTTTTATATTTTGTTGTACATTTGTCCATTTAGTAATTATCTCATGT 8711
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
8712 GTTGTTATAATACTT---TTTAATCTAATTATTAAATTAAGATCCTTTTCGATAATGGTGTTTTTTATATCTCCACAAGATTTC------ 8792
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
8793 CAGGTA---ACATTATATTCTTTAAATAAATTATTATACCATTCTATTGTTGGA---CGTATAATATA-ATAAAAATGAGGTGTTTT--- 8872
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
8873 TTGCTCGTAATATATCTCATCAAAATAAGTAGGAAT 8908
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 13592
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.02
13593 TCTTCTTTTAATAATGTAAAAAAGATTTCTTTACCATTGAAATTCGATATTGATGATTTTTCT---ATATTTTGTGCTTCCATAATTGCA 13679
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
13680 TCGTATATTACTTTTCTTATTACTTTTTCCCATTTTGTTGTG---GTTTGTTTTTTCTTAATTAAA---TTTTTTTCATCTTCTTGTAAT 13763
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
13764 ATCGTTGTTATTATTTTAAAAGCCTTTTCGCATGCTTCTTTATCTAAATTAATACGTTCGTTCTTATAAATAAAAGTGTTCACAATAGGA 13853
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
13854 TCGGTGGTAGTAATTGATGTG---TTCTTAAGAGCT 13886
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 22769
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
22770 ATTTTATTACTTTTTTTATAGTTTGTAAATATCAAAAAAATGATAAGCTATGCATATGATATTTATTCATTATTTTTTATTTTTATTTTT 22859
1 M T I D L V R Y L T V - P M I L F I I G L S G I F L N R K N 29
22860 TTTGATATACGAGTATGACGTTTAGATTTTTTAAATTTTTTATTACTTTTTATATTATTATTTTTTCTTACTTTTTTAAAAGATTTTTTA 22949
30 I I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I 59
22950 TATCTTTTTTTTTTTGAAAAAGTATTAGTAGTTCGGATATTATCTTATTTACTCTGCGTGTTATACCTATGTTATATATTTACGAGATCT 23039
60 G Q V F A L L V L T V A A A E S A I G - L A I L V I Y Y R A 88
23040 TAAGGTACACGTACAGATTCACGTATT---TTCTCAAAGCGT 23078
89 R G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 25866
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.10
25867 ATTACTACTTCATTGGTGTTAATCTTACTTCTTCCCTATGCATTATTAGGTCTTGCAGGAATGCACGCCGTATTCCA-GATTATCCTGAT 25955
1 M T I D L V R Y L T V P M I L F - I I G L S G I F L N R K N 29
25956 GCTATTTACATTTTAATTTA-ATAGTAGTTATGGTTCTTTTGTTACTTAGTTTCCACTATCATATTCTTTATATTTGGTGTGTTTTTAAT 26044
30 I I I M L M S I E L M - L L A I N F N F V V F S V Y - L D D 57
26045 TATAATTTATTTATAATGGTTTTCCTTCTATATTTTATATATTAAACCTTTAATCAAAATTACTTTCTTCGTATTAAACAAATATTCAAG 26134
58 L I G Q V F A L L V L T V A - A A E S A I G L A I L V I Y Y 86
26135 GAAATAATGAATGTCTTAATAGTATTCTAAAGAATTAACATCTTAATTCTT 26185
87 R A R G T I A V E - Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 26258
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.13
26259 GCTGTGCCAACGGTATTAAGATTTTTAGTGGTTAGCAACCTTATTTGGTT-CTTATCTTAAATTACGTACTCCTTTACTATTCATCTTAG 26347
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N - 29
26348 GTTTTCTTATTTTGTTTACATTAGGTGGTCTTAGTGGAGTTGTTAGCTAATTCTGGTCTTGATATGCTTTCCATGATACTA------TTA 26431
30 I I I M L M S - I E L M L L A I N F N F V V F S V Y L D D L 58
26432 TGTTGTAGCTCATTTTCATTA---TGTTTATCTATGGGAGCAGTTTTGCTGCTTTTGCTGCTTTTTATATTGGTTTTCTATTATTAAATC 26518
59 I G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A 88
26519 TTTACTACTTATGAACCACAGAATGGGAATTTGTTTATAATC 26560
89 R G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 26551
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
26552 ATTTTAATACATCTTCTCCTGAT-GCAACGGTGGTGGAGATCCTATTTTATATCAACATTTGTCTTGGTTTTTTGGCCATCCAGAAGTTC 26640
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
26641 ATTTTAATTTTACCTGGTTTTGGTATGTTTCTATTA---TTA---TTCAAGCTATGCTAATAAAGTATTTTT---GGTTATTTA---GGT 26718
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
26719 ATGGTGTATGCTATGTTGTCTATTGGTATTTGGGTTTTATAGTGTGGGCTC---ATATATGTATACTGTAGGATTGGATGTGGATACGCG 26805
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
26806 CTTATTTCACGCTGCTACTATGATATTGCTGTGCCA 26841
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32189
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 26 Length-adjusted: 0.25
32190 CTGTATTTAGACTCGATAAAACAATTGGATATTCATCTATCTACATTCTTGCATAATATGCGCAACCAATTCCGCAATGCGTATACAATC 32279
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
32280 CATAAAAGTAATCTAAATCTGTTAAAGGTTAATCTAGAGCTTCAATGGAAT---ACAACATATGAAGCTGCAATTGCTGCACTCTTTGCC 32366
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
32367 AAAATATGGAAGTTTATTCCGAGCAATATCACTCAATTTACAGACCTCCATTATTTTCTTAAATTGCTAGTTATCTTTACACAAGGACCT 32456
61 Q V F A L L V L T V A A - A E S A I G L A I L V I Y Y R A R 89
32457 CATCCTACAGATGTATCTTTGAAAAATCCTCTATTTACT 32495
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32902
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
32903 CAAAAGAAGCAAGTAGAAGGTTATCTTTCTGAGCATATAAACTTATTTGTAATTCAA---GATTTTATT---CTAAGTCATTATCAAGTG 32986
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
32987 CCTCCAACAACATTTACGGGTAATTTTCAAATATCCAAACTT---ATTAATAAACCTTTAGACAAGTTTTTTGGATCTACCTTATCAAAT 33073
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
33074 AATTCTTATTCACTTCTTATCAATTATTTAACAAGTACAACTAAGATTATCTTCTTACATGTTGAAACACTAATTTCTCAAGCCCAGTCC 33163
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
33164 TCTTCACTACGTCCACTCTTAAATCCTTTCCCATCA 33199
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 36835
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.05
36836 TGCAGTTATTCTTTTGTTTTACTTACTCGCATGCTTTTGGTCCTGCAAGCCATTTCTTTCTGTTTATATGATTTGACTCGCCGAGAATTT 36925
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
36926 TATATTTTATTACTTTA-GCT---TTTCTTATATTTTCCTAGGATTAT---TTCCTATTATTTGACTCATATTGGACC---TTT---GGT 37002
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
37003 TTGGTTACTGGTTTAATATAACTTAAATTTTGATGTTTTGAATCTTGAATAAAATTAATCAATATGTTTTATTTTTATTAGTGTAGGTTG 37092
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
37093 TATCTA---GTTAATACAATAAGTCTTATTGCATTT 37125
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37195
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 26 Length-adjusted: 0.25
37196 CGTCAAAATGATTTAAAAAGGATTATTGCTACTCA-TCTATTGCACATATGAATTTTTTAGTGGGCTATTTTTGTAAAAGATTTATTAGT 37284
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
37285 TTAACAGGTTCTTTATTATTGCAA---ATGCTCATGGGTTTCTTCTTCCGCTTTATTTTTAGCAATGGAATGTTATATGATGATATAAAT 37371
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
37372 CACGTAATATTTCTATTATC-GTG---GTTTGTTACTGTTATGCCAATATT---TTGTTTCTTCTTTTTTATTTTTTCTTTAGCGAATTT 37454
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
37455 AGGGTTTCT---TCTACTGTTAATTTTATTCTGAAA 37487
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37788
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
37789 ATTTATATTAT-TTTATCTACTTTTTAGGATGT---TTAGTTGTCTTATTACTAGA-GTAATTGA-ATATGTCTTAAAGAAAAATATATA 37872
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
37873 TTTTATTTTTTGTATTGTATTATTAGTAAATTGCTT---TTCAACTTAGAGATTTAAACTTTT---ATTTATTTTTTGAAGCTTATTGAT 37956
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
37957 ACCTGTTTTGCTCTTATAGGAATTTGGGG-TTACAAATAGCTAAGATTTTGCTGCTAATAATTCTTTTTATATACTTTATTGGTTCTTTT 38045
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
38046 TTTATGTTAACGGAATTGTTATGATAATTATTTAAC 38081
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 38665
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
38666 ATTAAAATAATATTATTAATCATCATTTATATAAATGCAGGACTTTTTATCTA-AGCATATA-AAACAATAT---AATAAAGTCAATTTG 38750
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
38751 ATAAAAAGTAGTTGTTTATTGATATTATTAACTTTTAATTTTTATTCCACTTACCGTTTAATTATGTCAGAATATATAAATGAATTAGTT 38840
31 I I M L M S I E L M L L A I N F N F - V V F S V Y L D D L I 59
38841 AAAATAGCTTTT---TTATA-ATGATGTCCTTTGCTTTAGCCTTAATTCTTTTAGGT---GCTGTTTATGTTTTAAGTTTTACATCAAAA 38923
60 G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R 89
38924 GTGGATTTGAAA---AATCATCTG---CTTATGAGTGTG 38956
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44310
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.07
44311 GAGTTACTCGACATCGTTTCTCTGTGCCTAATACAAAAGCGAAGGAGAATGATATTATCAAAAAATATTCGTATAGATTTAGTATTTATC 44400
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
44401 ATAATTATGGTGTTTCTAATAATCAAATGATTGTTACTTTTCCTTCTATTTTTATTCAAGGAATTGATGCTCATATTTTCCATAAGTGTT 44490
31 I I M - L M S I E L M L L A I N F N F V V F S V Y L D D L I 59
44491 TGAATAATATTCATATGCTCATATACTAGTATTTATTGTCTTGAAGGCTT-ATAATTCTATAAATTCTTTCTTTACTTTCTAAGAAGCAC 44579
60 G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R 89
44580 CCTATTATTCAATGTACCAATCTCGAGCTTATCAAACAT 44618
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44902
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.11
44903 TATAAAATTGAAATTCAACGTAAATTTTTAGAATCCTTCTTTTTAAAGATTTTAAATAAATCGTTAGTAGAGTTTTTAAATCAAGAGAAA 44992
1 M T I D L V R Y L T V P M I L F I I G L S G I - F L N R K N 29
44993 TCTGAAACTTTGGGATATGCTCTTTTTATATTGTGGACAGCACCTACATTCGATATTGTAACATATGAAACA---ATTAAGTTACAGATA 45079
30 I I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I 59
45080 TCTTCTGAATTACGGAAAACCATTATTAATTATCTTTTTTGTGTTAATAATTTAACATTA---ATTAGTATTGGCTATCCTATTAAACGC 45166
60 G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R 89
45167 GACGCTTTG---TACAAAGCGTTTACTATAATACATGAT 45202
90 G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45527
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
45528 AATGGTTTCGATCTTGTTAGGAAA---AATTTCAAAATAACACAAAAATTATTA---TTTCAAGAAATCTTGTATAATGAAACAAAGTTT 45611
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
45612 TTTGCCAAATTAAAAGCTGCTAATCCTACACTGGATATCAGAAAATTTAAAATAATTCCTTTAACGATTTTGAAACGTTATTATCTTTCT 45701
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
45702 GATAAATATAATTTTAAAGAA---ACAAAGTACTTAGCTCAACAACAGCAAGCATTTTGTTTGTTCGAG---TATTACAAAAAC---GGT 45782
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
45783 TATATTATTATTCATTCTCATTTCTTTATGAACCCT 45818
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45671
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.03
45672 GCTCTTTTACCGCTAACAAGAATATATACAGAAAATAGATATTTTTTTTCAGGATTCTTGAGTTGCCTAGCATTTTTGATAAGTTCATTG 45761
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
45762 ATTATTAAACGCCCATCCACTTTCATATTAAAAGGTGGGCTAGACATATCAAATATAAAATTCTGCATAATGGTTTCGATCTTGTTAGGA 45851
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
45852 AAAATTTC-AAAATAACACAAAAATTATTATTTCAAGAAATCTTGTATAATGAAACAAAGTTTTTTGCCAAATTAAAAGCTGCTAATCCT 45940
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
45941 ACACTGGATATCAGAAAATTTAAAATAATTCCTTTA 45976
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47248
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
47249 CTTACATTTGCTTTTATAATGAAATAAAAACAAAAACAAACTCTAATCAAATCTGGGATATTGCAACCCTTTTACATTTCTAATAAAAGT 47338
1 M T I D L V R Y L T V P M I L F I I G - L S G I F L - N R K 28
47339 ACCTTTAAAAAGAAGAGCTTAAGTTATTGCCTACAGCTAAAACGAAAAAGTTACTTACTTATTTTGATACTGATTTAGATTAATAATATG 47428
29 N I I I M L M S I E L M L L A I N F N F V V F S V Y L D D L 58
47429 CTAGCGTCTAATTTTATTTTGTTTAAATTACATATTTTGCGAAACTTTAAGAGTTACAGTATTTGTTGTTATATATTAATCTTTTTAAGT 47518
59 I G Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A 88
47519 AGCTCTCGTATGACTCTTGATATACCAAATGCTAGTTATGCT 47560
89 R G T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 56675
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.17
56676 CTAAAAATAATTATCATCGATTACATACTCGTAGAGAAACTAATTTTGTATCCAAATATATATAATATTAAAATT---TTTAATTATTAA 56762
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
56763 CTTATATATTATATTTCAATCAAAAATCTAATTCTAGTAATTTATTAGAAAACCATTTATTTTAAAATAATATTTAATAAAAAACTAAAT 56852
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
56853 AATGTTATTACAAG-ATAATA---ACCTTTTCTTTATTCGAATATGCTTTTAAGTTTATATTTTTCTCTTATTATTATATATACAGTAAC 56938
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
56939 ACCAAATGCTATCATGCATTATTAGCTTTAATTTTA 56974
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 60193
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
60194 GTTTTATTACATTTAGCCTTATACATCAATCTG---GTAGTGGTACATCTTCAGGGTGGGGCCGCTCTATTGATGAAATTCTTTTCATCC 60280
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
60281 TTATTATACATTAAAGATTTTTTTAGTGTAATTTTATTTATAGCCAT-AATTATATTCTTTGTTCTTTTATACCTAATAGCTAGGTCATC 60369
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
60370 CAGATAATTATATTCCTG---CAATCCTGATCAAACTCTGAGCATATTGTTCAGAATGGTATTTTCTACCTTTTTATGCATCCT---TCG 60453
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
60454 ATCTATTCTAATAAATTATTAGGTGTTATTGCCCTT 60489
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 60294
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.07
60295 TTTGGTCAAAAAATTGTAAATTGGCTTGGAGTG---GTTTTTCTGTAGATAATCCTACTTAGCAA-ATTTTTCTCTTTACATTATATTTA 60380
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
60381 CCTTTTGTATT-TTAGCTTTTGTTTTATTACATTTAGCCTTATACATCAATCTGGTAGTGGTACATCTTCAGGGTGGGGCCGCTCTATTG 60469
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
60470 ATGAAATTCTTTTCATCCTTATTATACATTAAAGATTTTTTTAGTGTAATTTTATTTATAGCCATAATTATATTCTTTGTTCTTTTATAC 60559
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
60560 CTAATAGCTAGGTCATCCAGATAATTATATTCCTGC 60595
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 60666
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
60667 TATAATATAACTTTGGTATATATGCTTAGTTGTATTGGCATACAAATTATTACTGGTATTTTTCTTGTTATGTTTTATTGCTCAAATGC- 60755
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
60756 ATTTTAGCTTTTTTAAGTGTTGAG---CATTTATGAGAGATGTCCTTA---TGGTTGGTTTATCCGATATCTCATGCTAATGGT---GCT 60836
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
60837 TCTTTTTTCTTTATTGTAGTATA-TGCTCATCTTTTTCGCGGTTTGTATTATGGTTCATACTTTTTTCCGCCGATTATTATGGTGCTCGG 60925
61 Q V F A L L V L T V A A A E S A I G L A I L V I - Y Y R A R 89
60926 AGTAATTATTTTATTATTAATGATTATTACTTCTTTTTAGGA 60967
90 G T - I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 61438
Protein: lcl|KC353356.1_cdsid_AGH24309.1 [gene=nad4L] [protein=NADH dehydrogenase subunit 4L] [protein_id=AGH24309.1] [location=54193..54501] @ 0
DNA length: 612 Protein length: 102
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.18
61439 ATAATATTGGAAAAAATTTTTTATTTAAAAATATTTTTTTTGTGTTTTTTATTT---TTT---GGTTTTTTTTTTCATCGGTTTTCATTT 61522
1 M T I D L V R Y L T V P M I L F I I G L S G I F L N R K N I 30
61523 TTTGTGTTTTTTTGGAGTACTCTCCGGATTTTGTTGTTATAAAGCGTTAAAATTATTTACTTTAATATGCAGGTTTTCACCATTCTCATA 61612
31 I I M L M S I E L M L L A I N F N F V V F S V Y L D D L I G 60
61613 AGTTTATATTGTATCATTTTAGTAATTGA-GCAGTCATTAAGGATAAGATAATGTTA---GTACA-GTTATCATTACCATGTGTACTTTC 61697
61 Q V F A L L V L T V A A A E S A I G L A I L V I Y Y R A R G 90
61698 ATAATGCTTATCCAAAAAGAATCAAAAAAGCCATCA 61733
91 T I A V E Q I N L M K G 102
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17247
Protein: lcl|KC353356.1_cdsid_AGH24310.1 [gene=nad5] [protein=NADH dehydrogenase subunit 5] [protein_id=AGH24310.1] [location=54506..56518] @ 0
DNA length: 4020 Protein length: 670
1 Nt shifts: 35 ||| 2 Nt shifts: 0
Score: 582 Length-adjusted: 0.87
17248 AATAAATTAAAATGTTTTCATGTTTCCTTAATAGCATTTATAATTCTTTTTATGTTAGGTAGACATCTGGGAAGCAAATTGTCTCGGCTT 17337
1 M Y L L I V F L P L L G S I T A G F F G R S L G K Q G A A I 30
17338 TGCTATTACAAT---GTCATTTTATCACTTATAATTGTTTATATTATTTTATTCATGTTTTTTTTATGGTCAAATATAAGCTTT---AAT 17421
31 I T T S C V A L S S L F S M V A F Y E V G L C G S P C Y I R 60
17422 TTAGGTTCTTGGGTTTCTGTAGGTACTTTAGATATTAC-TACAAATTTATAATG---ATCCTTTATCCATTACTTTGGTACATTAATTCC 17507
61 L F N W I D S E M L H A S W G F L F D S L T V V M L I V V T 90
17508 TTTATTACTTTATTAATCTA-ATTTATTCTTATGA-TATTTACATGAAGATCCTAATTAGTTAAATTTTTTG---CTTATTTAGTTTTTT 17592
91 I V S S L V H L Y S V G Y M S H D P H L P R F M S Y L S L F 120
17593 CTCTTTTTCTATGTTTGTCTTGTTTTTGCTGGTAATTACTT-ATTATGTTTTTAGGATGGGAAGC-TGTGGATTAGCTTCTTATTT-CTT 17679
121 T F F M L M L V T G D N F V Q M F L G W E G V G L C S Y L L 150
17680 ATTAATTTCTGGAT-ACAAGAAATCAAGCAAT-CAGTCTGCTATTAAAGCAATTATTTTTAATCGTGA-GGTGATGCAGCTTTC---ATA 17763
151 I N F W F T R L Q A N K S A I K A M I M N R I G D F G L S L 180
17764 AGTGCTATGGGTCTTATTTATTATTTTTTAATTCTTTGATTTAGAAGATTTAGAATTACTTGTTCACAATATGAACATACTACTTTTAGC 17853
181 G M M A I F F I F K S V D F I T V F A L S P Y M T D A T I V 210
17854 TTTTTTCATATTCTTTTCAACAATTGA---ATGATAGCTCTTTTCCTATTTTTGCTGCTGTGCTAAATCAGCACAATCTTT---TTACAT 17937
211 F L N Y E V H A L T L I C I L L F V G A V G K S S Q L G L H 240
17938 CCTTGGTTACCTGATGCTATGAA-GGACCTACACCAGTTTCAGCATTATTACATTCTGCTACATG-GTAACAGCAGGTGTTTC-TTAATA 18024
241 T W L P D A M E G P T P V S A L I H A A T M V T A G V F L I 270
18025 TTAAGATC-TCTGTTATTTTCTCACATGCTCCTTATATTTC-ATTATTGTAGCTTGTATTGGCCTAAT-ACAGCTAATATTTCTTCTTTA 18111
271 A R C S P I F E Y A P T A L L V V T I V G A M T A F F A A T 300
18112 ACAGGTTA-TTACAATATGACATAAAACGTATTAT-GCATTTTCAACCTGTAGCCAACTTGGTTT-ATGATGTTTGCTAT-GGTATTGGT 18197
301 T G L L Q N D I K R V I A Y S T C S Q L G Y M V F A C G I S 330
18198 AATTATACTTT-GCTTTATTTCATTTAGTAAATAT-GCTTTCTTTAAAGCACTCTTATTTTATGT-GCCGGATCCGTTATCCACGCTACC 18284
331 G Y S V G M F H L M N H A F F K A L L F L S A G C V I H A L 360
18285 GGC---CATCAGGATATTCGGCGTATGGGAGT-TTATTTAAAGA-TTACCCATAACTTATGTTGCAATGCTCTT-GCTTCTTTATCTTTA 18368
361 A D E Q D M R R M G G I V K I V P F T Y G M M L I G S M S L 390
18369 ATTGGTTTTCT-TTCTTAAGTGGTTTTTATAG-AAGGATTTTCTTCTAGAAGCTACTTACAATATATTTGGTATGTCT---CTTATGTTA 18453
391 M G F P F L T G F Y S K D V I L E L A F A K Y T I D G T F A 420
18454 TTTATTTTATATCCATATTTCTACTGCTGTTAGTTATTTTACTCTTTCCGATTAATTTTCTTTGTGTTCTTGGTGATCAAGCATATCAAT 18543
421 H W L G T V A A F F T A F Y S F R L I Y L T F L G E T N A P 450
18544 AAAAACATTGAAAACTATTCTGAAAGCTCCTATTTTCTATAT---CTACA-TTAATTATTTTAACTATACTTTCTATTTTTCTGGATTTT 18629
451 R T I I N H A H D A P F I M A L P L M I L A I G S I F V G F 480
18630 ATTTAAAAG---------ATTGAT---------GACTAT---TCAAACATCTTATATAATTTTAGTGCCTCTCTTTCAGTGATACAGCTA 18698
481 I M K D M M I G L G T D F W G N S L F T H P K N L T L I E S 510
18699 ---CTGATCAAGATTCT-TTA---ATGATTTATTTAAAGTTTACCCACAATCTTTTCTTTATCGGTTTACTTTTAGT----ATATATAAT 18777
511 E F I P T P I K L L P V I L S I V G A S L A I I L N N F Y A 540
18778 TTATTGAAATTAAACTTAAAAAGTCAACTATTATATAGACAATACTATTATTACCTTATTTTCTTGTAAAAAATTCTTTGAGATGCTTTT 18867
541 T F L V S L K T S L L G R E I Y S F L N K R - W Y F - D I V 568
18868 AATAGTTTTTATATTTCTTACCATCTGCAACTTTTC---TTTAAATATACTTATAAAATTATAGATAAGGT-GTTTTAGAACATTTAGGT 18953
569 Y N E Y V G K T L L W F G Y N I S F K S V D K G L I E I L G 598
18954 TCAACGGGTATTATGCT-TTTCTTGAA---TTATTTTTGAAAGTATTGTTAATGTGAAACAACCTTAATAATTATCGTTCTTTTCTTTTC 19039
599 P Y G L E R L T R R L T S K V S A L Q T G Y I Y H Y A F I M 628
19040 ATAATCTTTGTCCTCGGAGCTAC-ATTATAATTTT-TTATGG---TTTATACGC---TTTTCT---TATAG-CAATTTTCTTTATTAGTA 19117
629 L L G V T L I I T I I G L W D Y I S M W T D Y R L Y F L F L 658
19118 CTCTTAATATTTTTAATACCGAAATCACTTCATAAC 19153
659 L T I I F Y G Y S E N K 670
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 36927
Protein: lcl|KC353356.1_cdsid_AGH24311.1 [gene=nad4] [protein=NADH dehydrogenase subunit 4] [protein_id=AGH24311.1] [location=56624..58105] @ 0
DNA length: 2958 Protein length: 493
1 Nt shifts: 35 ||| 2 Nt shifts: 0
Score: 589 Length-adjusted: 1.19
36928 GTTCTGTTTAAATTTATATCTTCTTTATTATGATCTTTTGTTAAATTGTTTAATATATTTACTATAATCTCTTTATTTATTATACT-GCA 37016
1 M L Y S V F S T Y L L P I I I L T P I V G V F I L F L I P D 30
37017 AATAAAACT---ATAATGTTC---ATAATTATTCCTTGCAGCTTCTTTTATTATATTTATTA-TTCTATAGGATTATTACAAATACATTG 37099
31 W K T S V I K Q I A L Y T S L I T F V F S L F L W I F F D K 60
37100 TCTACATCTATTATATAAATACTAATTATTTGTTCTGATGTCCTTTCATCTTTTGTGATAAC-TTATCTTACATGTTAGATTTTATATAG 37188
61 S T S K F - Q F V Y E V D W I E T L N I N F S L G I D G I S 89
37189 TAATTTATATTATTTTATCTACTTTTTAGGATGTTTAGTTGTCTTATTACT------AGAGTAATTGAATATGTCTTAAAGAAAAAT--- 37269
90 L F L V I L T T F L I P L C I L T G W E S V K H N I K E Y M 119
37270 ATATATTTTATTTTTTGTATTGTATTATTAGTAAATTGCTTTTC-AACTTAGAGATTTA-AACTTTTATTTATTTTTTGAAGCTTA-TTG 37356
120 I C F L L L D A L L I M I F C V L D L V L F Y V F F E S V L 149
37357 ATACCTGTTTTGCTCTT-ATAGGAATTTGGGGTTA-CAAATAGCTAAGATTTTGCTGCTAATAATTCTTTTTATATAC---TTTATTGGT 37441
150 I P M F I V I G V W G S R E R K V R A A Y M L F L Y T F L G 179
37442 TCTTTTTTTATGTTAAC-GGAATTGTTATGATAAT-TATTTAACAGGGACTACTAATATTTTAGTAATAAAAGGTTATTTATT-GAAGAT 37528
180 S L F M L I A I M V I Y F D A G T T D I Q V L L T H E F S E 209
37529 CATATCGAAAAGATATTATTTCTTTTGTTTTTTATAGGATT-AAGATCAAAATTCCGATGATTCCTTTCCATTTATGGCTTCCTAA-AGC 37616
210 K R Q L L L W L A F F I S F A I K I P M V P F H V W L P E A 239
37617 CATGTTGAAGCTCCTACTAC-GGTAGTGTTTTGTTAGCAGGAATCTT-TTAAAATTAGGTTCTTAGGTTTTATACGCTTTCTCTTTT--- 37701
240 H V E A P T A G S V L L A G V L L K L G G Y G I L R F S I P 269
37702 CTTATTCCTAATGCTTCTTTTTATTTCTA-CCATTAATATT-ATAGTTGCTGTGATATCAATTATATT-AGCTCTTTTACAGT-TTACGT 37787
270 M F P E A T I Y F T P L V Y T M S I I A I I Y T S L T T L R 299
37788 CAAAATGATTTAAAAAGGATTATTGCTAC-TCATCTATTGCACATATGAATTTTTTA---GTGGGCTATTTTTGTAAAAGATTTATTAGT 37873
300 Q I D L K K I I A Y S S V A H M N F V T I G I F S L N M Q G 329
37874 TTAACAGGTTCTTTATTATTGCAAATGCT-CATGGGTT-TCTTCTTCCGCTTTATTTTTAGC-AATGGAATGTTATATGATGA-TATAAA 37959
330 V E G S I L L M L S H G I V S S A L F L C I G V L Y D R H K 359
37960 TCACGTAA-TATTTCTATTATCGTGGTTT-GTTACTGTTATGCCAATATTTTGTTTCTTCTTTTTTATTTTTTCTTTAGCGAATTTAGGG 38047
360 T R L L R Y Y S G V V Q V M P I F A T L F M L F T M A N I S 389
38048 TTTCT-TCTACTGTTAATTTTATTCT-GAAATGTTAATATTTTTTGGCTTATTTCAAAC-AGTCCTTCTATAGCTAT-TTAACTTTAACA 38133
390 L P G T S S F V G E F L V L I G A F N S N T T V A F L A T T 419
38134 GGTATTTC-TTATCTGCAGT-TATTCTTTTGTTTTACTTACTCGCATGCTTTTGGTCCTGCAAGCCATTTCTTTCTGT---TTA---TAT 38215
420 G I I L G A A Y S L W L Y N R V V F G S L K I E Y I Q F F Y 449
38216 GATTTGACTCGCCGAGAATTTTATATTTTATTACT-TTAGCTTTTCTTATATTTTC-CTAGGATTATTTCCTAT----TATTTGACTCAT 38299
450 D V T R R E F L V F V P L V I L V F V M G I Y P D V F L D A 479
38300 ATTGGACCTTTGGTTTGGTTACTGGTTTAATATAACTTAAATTTT 38344
480 M H V S V A N L I - E H A K F 493
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 36975
Protein: lcl|KC353356.1_cdsid_AGH24311.1 [gene=nad4] [protein=NADH dehydrogenase subunit 4] [protein_id=AGH24311.1] [location=56624..58105] @ 0
DNA length: 2958 Protein length: 493
1 Nt shifts: 32 ||| 2 Nt shifts: 0
Score: 459 Length-adjusted: 0.93
36976 GTTCTGTTTAAATTTATATCTTCTTTATTATGATCTTTTGTTAAATTGTTTAATATATTTACTATAATCTCTTTATTTATTATACT-GCA 37064
1 M L Y S V F S T Y L L P I I I L T P I V G V F I L F L I P D 30
37065 AATAAAACT---ATAATGTTC---ATAATTATTCCTTGCAGCTTCTTTTATTATATTTATTA-TTCTATAGGATTATTACAAATACATTG 37147
31 W K T S V I K Q I A L Y T S L I T F V F S L F L W I F F D K 60
37148 TCTACATCTATTATATAAATACTAATTATTTGTTCTGATGTCCTTTCATCTTTTGTGATAAC-TTATCTTACATGTTAGATTTTATATAG 37236
61 S T S K F - Q F V Y E V D W I E T L N I N F S L G I D G I S 89
37237 TAATTTATATTATTTTATCTACTTTTTAGGATGTTTAGTTGTCTTATTACT------AGAGTAATTGAATATGTCTTAAAGAAAAAT--- 37317
90 L F L V I L T T F L I P L C I L T G W E S V K H N I K E Y M 119
37318 ATATATTTTATTTTTTGTATTGTATTATTAGTAAATTGCTTTTC-AACTTAGAGATTTA-AACTTTTATTTATTTTTTGAAGCTTA-TTG 37404
120 I C F L L L D A L L I M I F C V L D L V L F Y V F F E S V L 149
37405 ATACCTGTTTTGCTCTT-ATAGGAATTTGGGGTTA-CAAATAGCTAAGATTTTGCTGCTAATAATTCTTTTTATATAC---TTTATTGGT 37489
150 I P M F I V I G V W G S R E R K V R A A Y M L F L Y T F L G 179
37490 TCTTTTTTTATGTTAAC-GGAATTGTTATGATAAT-TATTTAACAGGGACTACTAATATTTTAGTAATAAAAGGTTATTTATT-GAAGAT 37576
180 S L F M L I A I M V I Y F D A G T T D I Q V L L T H E F S E 209
37577 CATATCGAAAAGATATTATTTCTTTTGTTTTTTATAGGATT-AAGATCAAAATTCCGATGATTCCTTTCCATTTATGGCTTCCTAA-AGC 37664
210 K R Q L L L W L A F F I S F A I K I P M V P F H V W L P E A 239
37665 CATGTTGAAGCTCCTACTAC-GGTAGTGTTTTGTTAGCAGGAATCTT-TTAAAATTAGGTTCTTAGGTTTTATACGCTTTCTCTTTT--- 37749
240 H V E A P T A G S V L L A G V L L K L G G Y G I L R F S I P 269
37750 CTTATTCCTAATGCTTCTTTTTATTTCTA-CCATTAATATT-ATAGTTGCTGTGATATCAATTATATT-AGCTCTTTTACAGT-TTACGT 37835
270 M F P E A T I Y F T P L V Y T M S I I A I I Y T S L T T L R 299
37836 CAAAATGATTTAAAAAGGATTATTGCTAC-TCATCTATTGCACATATGAATTTTTTA---GTGGGCTATTTTTGTAAAAGATTTATTAGT 37921
300 Q I D L K K I I A Y S S V A H M N F V T I G I F S L N M Q G 329
37922 TTAACAGGTTCTTTATTATTGCAAATGCT-CATGGGTT-TCTTCTTCCGCTTTATTTTTAGC-AATGGAATGTTATATGATGA-TATAAA 38007
330 V E G S I L L M L S H G I V S S A L F L C I G V L Y D R H K 359
38008 TCACGTAA-TATTTCTATTATCGTGGTTT-GTTACTGTTATGCCAATATTTTGTTTCTTCTTTTTTATTTTTTCTTTAGCGAATTTAGGG 38095
360 T R L L R Y Y S G V V Q V M P I F A T L F M L F T M A N I S 389
38096 TTTCT-TCTACTGTTAATTTTATTCT-GAAATGTTAATATTTTTTGGCTTATTTCAAAC-AGTCCTTCTATAGCTAT-TTAACTTTAACA 38181
390 L P G T S S F V G E F L V L I G A F N S N T T V A F L A T T 419
38182 GGTATTTC-TTATCTGCAGT-TATTCTTTTGTTTTACTTACTCGCATGCTTTTGGTCCTGCAAGCCATTTCTTTCTGT---TTA---TAT 38263
420 G I I L G A A Y S L W L Y N R V V F G S L K I E Y I Q F F Y 449
38264 GATTTGACTCGCCGAGAATTT------TATATT---TTATTACTTTAGCTTTTC---TTA---TATTTTCCTAGGATT------------ 38326
450 D V T R R E F L V F V P L V I L V F V M G I Y P D V F L D A 479
38327 ------ATTTCCTATTAT---TTG---------ACT------ 38344
480 M H V S V A N L I E H A K F 493
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 30705
Protein: lcl|KC353356.1_cdsid_AGH24312.1 [gene=nad2] [protein=NADH dehydrogenase subunit 2] [protein_id=AGH24312.1] [location=58235..59731] @ 0
DNA length: 2988 Protein length: 498
1 Nt shifts: 19 ||| 2 Nt shifts: 0
Score: 107 Length-adjusted: 0.21
30706 TTAGTTTTTAGATACATTAAATACACTTAAACTACTAACATATCTGATTTATTATTTTTGACTATTTCA---TTATATTTATGATTTTAT 30792
1 M N F L T F F E N D I K V L F P E L F L T I S I L A L L V Y 30
30793 AGGTAGTTATCTAACATTAAAGGTGGGATTAACTTTGGTTTAGCAAGGTTTATACACGGCTG-TAATTTATAGTTTTATTATTTATATCT 30881
31 G V M Y S T S A L Y N Y P I M I K T T G W L S I Q V L F I T 60
30882 ATTAACTTTTAATTTTCTAATAAAAGCTATATTATTTTAATGATCTGCTATGTTTTCTAGTATAATTTTGATTATATTGTATTAAATTTT 30971
61 I L L T I N N P I H N Q T I M N N L L - I A - D Y F G T V T 88
30972 CAAATTTCTATATTTTTTTATGATTATTTCTTGTTAGTTTATATGCTTAATTTCTAATAATCGCATTAA---AACTACTTTGAATATCCA 31058
89 K T V L L I S S L V A I L I S F D Y I Q K E R I N F F E Y M 118
31059 ATAATAGTTTTATTAGCAGTATTGGGAATGGTAATATTGTTGCGTTCTACTGATTTATAAATTATTTGGTTTTTAACAAT-GAGTTACAA 31147
119 I L I L L A T L G M L L I I S S Y D L - M S M Y L A I E F Q 147
31148 TCTTT-TGTTTTTATACTTTGGCTGCTTATGAACA-AATAGATCATACTT-ACAAACGAAGCAGGTTTAAAATATTTCTA-TTTGGATCT 31233
148 S L C L Y V L A A F K R N - S L F S V E A G L K Y F V L G A 176
31234 AT-AGCAGTTCTTTATATTTATTTGGTACCTCTAA-CTTTATTTATATACAGGATCTGTTAATTTTGATAGTATAGTGCTCTTTCTTATT 31321
177 F S S G I M L F G I S I I Y G F T G V T G F E D L G K L L I 206
31322 TTCAATTG-AAAATAATATATATTTCATATAGT---TTAGTTTTA---ATTCTT---ATA------GT-TTATTTTTTAAACTCGGTATA 31394
207 F S S N D S L I S S S G I I L G I V F V S V G L L F K I Y A 236
31395 GCACT-TTTCATTTTTGGCTTCCTTTAGTTAT-ACCTATTCTTCTTCTATGTTACCTATTTATTTATTTATTACCAAAAAT---CCATTA 31479
237 V P F H V W V P D V Y Q G S P T I V T A F F A I A P S I S V 266
31480 TTTTATTTATTATATAAATTACATCTATAAGTT------GAGTTATAT---TATTTACTACCGATA---TTA---TT----ATC------ 31544
267 L T L L T R L Y T S V L H D L I T Y W Q P V F I F C S I A S 296
31545 TTATTTATAGGTACTGTCTTTGCTTTAAAGCAACT-AA-TTAAAAACATTCCTAGCTTATAGCGCATTGCAAAT-ACTGCGTTTTTTCTA 31631
297 M L L G S L G A L S Q K R I K R L L A Y S A I G H V G Y I L 326
31632 ---GCACTATA-ATGTATAATCAACATACTCTTTTT---ATGCTTTTATTTTTATTTATTTACTTATAGTATCTGATTACAATAGCTTTT 31714
327 I A L S T G T P E G I R G L L V Y A V I Y I - I M S T C F F 355
31715 TACCTATTTGTT---TTTGATTAAGTAGATAATTCTTTAGCTTTCATTAACTGCGT-GACATG---ATATTTTGAAAAAAGTTAATCCGT 31797
356 T I L I S L R K K Y S G N Q I V T I D E L R A L Y K S N P V 385
31798 CTTAGCAATTTTCTATGCATTAATGGCCTTGGTTTTGCAGGAGTACCACA-TTACTAGGATTTTTTTCTAAATTATTTATTTATTATCTG 31886
386 L S S T L A I V L F S M A G I P P L A G F F S K L Y V F L P 415
31887 CTTTATATTTTCAGCTTATTTACTTGTGCTGTTTTA---TTAGCTTTTTCATTAATTAGTAGTTTTTATTATTTGCGTTAGTTAAAATGT 31973
416 A I H E G L F L L V L V G I L A S V I S A V Y Y L G L V K I 445
31974 ---TATATTTCTCCTTTATTTAAAAAATGCTTCTGTTATAGTATACCTGCTATACCTGCTATATTATTA---CTATCT---TTTCTGTAG 32054
446 M Y F E K L D S W T S F E Q V D K Q K A I V L G V T T F L I 475
32055 TAGTATTTTTTTTAGATTTATCCAACGTATTTTGCAATTTTATTAAATTAAACTACGATCACAATACAC--- 32123
476 L F F F - I Y P S P L I L M S H K A A L M I C L 498
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8111
Protein: lcl|KC353356.1_cdsid_AGH24314.1 [gene=atp6] [protein=ATP synthase F0 subunit a] [protein_id=AGH24314.1] [location=60494..61243] @ 0
DNA length: 1494 Protein length: 249
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.04
8112 TATAGGCTTATTAAACCTAAAGTACCA---CCTCAATTTATACTTAATGTTTTGGTATCTATTATAAATACTGTAAAATCTTTTGACAAT 8198
1 M K S I V P L S P F E Q F E I N P I F A - I N T S F A F T N 29
8199 TATACGAAACAATTTAATCTTATTTCCAATACCTATATAAAAATATTTACCTATATAGCAAATAAAATTAATTATTATAATGTCATTTTA 8288
30 - S S L F A L I A V L S L V F F F Y L A T Y K S S I V P N A 58
8289 TGGGAAAAAATCTTA---CT-TATTATAAATACTGTACCGCATATCATTTT---ACTTTCTGCTCTATT---CATAGATACTTT---TTA 8365
59 W Q S A L E S I Y E F I S S M V Y G Q I G S K G Y K Y L P L 88
8366 ---TTTAG-GTAAATTATTTTATTTTTATAAAGTCA---TTTGGGTTA---CATTATTCTTTTTCTTAA---TCCCATTTAGTTTATATT 8442
89 I F T T F T F I L A C N M L G M V P Y S F T V T S H L V I T 118
8443 CTT---TTGACTATG------TTTGTGAACACT---ATATAAATTATTGGGAAAAAAATTCTGAAAATGTATGGACAACATATAAACCAA 8520
119 L G L A M S I F I G V N I I A A N Q H G L H F F S F F L P Q 148
8521 ---ATGTCTTACCTCCTGAATTAGATTTTTGGCATCCTGATT---ATAATGAGGATGATGATGATGAATGTA---TTCCGCCTAATGATA 8601
149 G I S L A L A - P F L V L I E I I S Y L F R V V S L A V R L 177
8602 TGGAGATCTCTTTTAGAA---CATTTATTCCTACTTATTTTG------ATGAGATAT---ATTACGAGCAAAAAACACCTCATTTTTATT 8679
178 F A N M M S G H A L L K I L A G F S W T M S S K G G L I F V 207
8680 ATATT-ATACGTCCAACAATAGAATGGTATAATAATTTATTTAAAGAATATAATGTTACCTGGAAATCTTGTGGAGATATAAAAAACACC 8768
208 A S I I P L A I V F A L T G L E L A I A F L Q - A Y V F A I 236
8769 ATTATCGAAAAGGATCTTAATTTAATAATTAGATTAAAA 8807
237 L V C I Y L N D A I H L H 249
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 36058
Protein: lcl|KC353356.1_cdsid_AGH24314.1 [gene=atp6] [protein=ATP synthase F0 subunit a] [protein_id=AGH24314.1] [location=60494..61243] @ 0
DNA length: 1494 Protein length: 249
1 Nt shifts: 13 ||| 2 Nt shifts: 0
Score: 202 Length-adjusted: 0.81
36059 TTAAATAAATGAATTATATAATCC---TTTGAACAATTTGAAATTATATAATTTCAAAGCTAAGTTATTTGGTTTCGATATCTCCCTTAC 36145
1 M K S I V P L S P F E Q F E I N P I F A I N T S F A F T N S 30
36146 AATTTAACTGTAGTGGTATTAAGTACAGCTTTATAATCTTCACTTAAATTATATACTGATAAAGGTTATAATATATT-CCACATAATTGG 36234
31 S L F A L I A V L S L V F F F Y L A T Y K S - S I V P N A W 59
36235 CAAAT-AGTATGGAAGCAATGTATAA-TTTGTTTTTAGTATTGTTTCAGAACAAGTGGA-CGTAAAGGATT-AAATACTTACCTCATTTG 36320
60 Q S A L E S I Y E F I S S M V Y G Q I G S K G Y K Y L P L I 89
36321 CTACTATTTTTT---TTATTATTTATTTTATAACTTATCAGGATTAGCCCTTTTAGTTTTACTGC-AGTTCACATTTAGTAATTACCTTG 36406
90 F T T F T F I L A C N M L G M V P Y S F T V T S H L V I T L 119
36407 GT-TTAGCATTAAGTATTTC-ATTGC-ATGGGTTATATAGGTATTAAAGAATTAGGTCTAAATTCGTAT---ATGTTTTTGTCCTAAAAA 36490
120 G L A M S I F I G V N I I A A N Q H G L H F F S F F L P Q G 149
36491 TATGCTTTATGGTTATTACCTTTATTAATTGTGTAGAATTTTTAT---TTTCTTCTTACGTCCTATAGTCTGGGTCTTCGTTTATTTGCA 36577
150 I S L A L A P F L V L I E I I S Y L F R V V S L A V R L F A 179
36578 AATATGTTAGC-GGTCATATCTTATTACATATTTA-GCTGGT---GGTTG-TGTTTATTATTAACTAAA---CTATTA---TCTTAGCAA 36655
180 N M M S G H A L L K I L A G F S W T M S S K G G L I F V A S 209
36656 TTCCTG---CTTTTGCTATATTGGCGCTATCGGTATTTAGAACTTGGTATAGGATTTTTACAAGCTTATATTTT-GTTATTCTTTTAGCC 36741
210 I I P L A I V F A L T G L E L A I A F L Q A Y V F A I L V C 239
36742 ATCTATCTTAAAGATTCTTTATATTCTCAT 36771
240 I Y L N D A I H L H 249
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32747
Protein: lcl|KC353356.1_cdsid_AGH24314.1 [gene=atp6] [protein=ATP synthase F0 subunit a] [protein_id=AGH24314.1] [location=60494..61243] @ 0
DNA length: 1494 Protein length: 249
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.00
32748 ATAAATCATTTATATCATACATCA---TATCGCAAATTCAAATTAGCACCGGATTTATACGTT---TCTGCAATAAAC---AATATAAGT 32828
1 M K S I V P L S P F E Q F E I N P I F A I N T S F A F T N S 30
32829 CCAATGTTTTATCAA---CAGTGCTTATCAACCCTTAAACAAACCATGATAGATCATTTACGT------TTTACGCAAAATAAA---CCT 32906
31 S L F A L I A V L S L V F F F Y L A T Y K S S I V P N A W Q 60
32907 ACGGATCTAACTTATTATTTTTATCTTATCAAACTAATGTTTTTTCCAGAA---GAATCAGATAGTTATAAA---GTACCGTTA---TTT 32987
61 S A L E S I Y E F I S S M V Y G Q I G S K G Y K Y L P L I F 90
32988 ACCTCTGAACAAAAGAAGCAAGTAGAAGGTTATCTTTCTGAGCATATAAACTTATTTGTAATTCAAGATTTTATTCTAAGTCATTATCAA 33077
91 T T F T F I L A C N M L G M V P Y S F T V T S H L V I T L G 120
33078 GTGCCTCCAACAACATTTACGGGT---AATTTTCAAATATCCAAACTTATTAATAAACCTTTAGACAAGTTTTTT---------GGATCT 33155
121 L A M S I F I G V N I I A A N Q H G L H F F S F F L P Q G I 150
33156 ACCTTATCAAATAATTCTTATTCACTTCTTATCAATTATTTAACAAGTACAACTAAGATTATCTTCTTACATGTTGAAACACTAATTTCT 33245
151 S L A L A P F L V L I E I I S Y L F R V V S L A V R L F A N 180
33246 CAAGCCCAGTCCTCTTCACTACGTCCACTCTTAAATCCTTTCCCA---TCAGTTGAATCTAAAGT-TCCCTAATACGA---AGTAAAGTT 33328
181 M M S G H A L L K I L A G F S W T M S S K G G L I F V A S I 210
33329 AATCCATTAATAATTTCTCAAGATTCTCAGTGGTGTAGTGCTATTGCGAATATCTTTTTAAAAGATGCTAATTTGGCAGATTACTTAAAG 33418
211 I P L A I V F - A L T G L E L A I A F L Q A Y V F A I L V C 239
33419 ATATTTCCCGTAGGCGCAAAGTATTTAAGT 33448
240 I Y L N D A I H L H 249
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 213
Protein: lcl|KC353356.1_cdsid_AGH24315.1 [gene=atp4] [protein=ATP synthase F0 subunit b] [protein_id=AGH24315.1] [location=61363..61938] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
214 CTTAATTCCTTTTTATTGATTAAACTTATTTTATTTATTTTAATTAGAATTTTTCTAATTCCAAATATTTTTTCTAAATATATAATTATT 303
1 M L S F L Q N K H V T L T L L - V F L V A I L T T R Q F I I 29
304 ATTTTTTTTAGTATTATTATATACATATGTTATAAATATCCTCGTACCAATATATTAATTAAG---GAAGATTTATTCGAATATGCTTTA 390
30 V H D E T L V L L C F V L F L T F L Y V A L K D M V T A T F 59
391 AAAACAACTAAAGAAAAAATG---ATAAATATATGT---ATCATAACGTTATATATATTTACTTTT---GTTATAGGTATATTTTATCTT 471
60 N D R A L Q I E K E F N D L Y S L K E Q T L Q L L A N H H E 89
472 AGATATATAAATATAACAAAAAAAGTAGACTTAAAAATTTATTATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAAGAAGAAATT 561
90 K Q V S L L S E I D - S L M L F T K S E V N N I I Q T R Q A 118
562 ATTTTAAATGTGGTAATAATAATAACTTTTATAATAATTTATATTTTTATAATATATAAATTTACTCAATATTTTAAA---TTACAAGTA 648
119 A L R S K L I A E F R N K L N T A L K K E D A F F Q F I Q Q 148
649 ATTAAAAGACATCTTTACTTAATAGGAATACCATTAAAT---AATAATTGGTATTCAACCGTTCATCGAAAGTATTTATGGCCTTTAGCA 735
149 S T N N I V M N N I L E N I N G S G G D I L K A T S F E E G 178
736 AATTCTTTTCTTAAAATAAGTATAAAACATAAAATTGAG 774
179 I R I L E E G A N A T E E 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2279
Protein: lcl|KC353356.1_cdsid_AGH24315.1 [gene=atp4] [protein=ATP synthase F0 subunit b] [protein_id=AGH24315.1] [location=61363..61938] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.03
2280 TCTAACTGTTATTATGATAATCCTGATATC---TTAGATGGGATTGTCCAAGATATTGTAACACGTTTTACAAAACAATGATCTTATATC 2366
1 M L S F L Q N K H V T L T L L V F L V A I L T T R Q F I I V 30
2367 AGAAAATTCAAC---ATACTAATT---TTT---TTACAAATAAAATTTCTTATAGTAATTTTATCCGTTTTTATCCTGGCAATTTAGGGA 2447
31 H D E T L V L L C F V L F L T F L Y V A L K D M V T A T F N 60
2448 AAACACAACCAAAATCTATTAAAGAAATGCCTGAGAGTAAAACACCTCAAG---AAA---TTACAAAATATTTTC---CATCAGGTACAA 2528
61 D R A L Q I E K E F N D L Y S L K E Q T L Q L L A N H H E K 90
2529 CATTACAAGATCTTGAAGAAGTTGCACAAGATGTA-ATGTATCCCAAAGAAATGTCTAGTATTCCTACTGAAAAAAGTGAAGAACCAATT 2617
91 Q V S L L S E I D S L M L F T K S E V N N I I Q T R Q A A L 120
2618 AAATCTGCAGCAGTTAAAGAAGAAGAAAAAAAAATAATAGAAAAACTTATAGAAGCTGATACTATAGCGGAAAAAATACAAGGTAATTCT 2707
121 R S K L I A E F R N K L N T A L K K E D A F F Q F I Q Q S T 150
2708 CATATTTTTAATCCATTAAGATTAGTTTATAACACCAGTAGTAAAGTATGGAATTACCTAAAAAAA---AATGTTGAATTTAAATTCCAT 2794
151 N N I V M N N I L E N I N G S G G D I L K A T S F E E G I R 180
2795 AAA---CCTGAGTCTGATAATTATACAGTGCCT 2824
181 I L E E G A N A T E E 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2612
Protein: lcl|KC353356.1_cdsid_AGH24315.1 [gene=atp4] [protein=ATP synthase F0 subunit b] [protein_id=AGH24315.1] [location=61363..61938] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.04
2613 CAATTAAATCTGCAGCAGTTAAAGAAGAA-GAAAAAAAAATAATAGAAAAACTTATAGAAGCTGATACTATAGCGGAAAAAATACAAGGT 2701
1 M L S F L Q N K H V T L T L L V F L V A I L T T R Q F I I V 30
2702 AATTCTCATATTTTTAATCCATTAAGATTAGTTTATAACACCAGTAGTAAAGTATGGAATTACCTAAAAAAAAATGTTGAATTTAAATTC 2791
31 H D E T L V L L C F V L F L T F - L Y V A L K D M V T A T F 59
2792 CATAAACCTGAGTCTGATAATTATACAGTGCCTATTACAGCCGTTTATGATACAAAACAAGGATCATCCGATATTCAATATAATTTA--- 2878
60 N - D R A L Q I E K E F N D L Y S L K E Q T L Q L L A N H H 88
2879 GAAAAAATAATTAAAGATTTGAAAATAGCTATACAGGAAAAATCTTTGAATAAAGAACAAGTAAAAAGCATTATTGATGATATTCGTAAA 2968
89 E K Q V S L L S E I D S L M L F T K S E V N N I I - Q T R Q 117
2969 AATTATGTTACTAAAGGGGTTAGTATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAGTCTTATGATTTTCAATATGAACCTTTAAAA 3058
118 A A L R S K L I A E F R N K L N T A L K K E D A F F Q F I Q 147
3059 CAA---ATTTGTAAAATT---AAAAAAGATATTATTATAAATAAAGAACAAGAAAAAATTGTTATAGATTCTAAATCATCTTATGAAGAA 3142
148 Q S T N N I V M N N I L E N I N G S G G D I L K A T S F E E 177
3143 AAATTGAAAAATTTAGAAGAAAAAATGTCAATAGCTCTTAAA 3184
178 G I R I L E E G A N A T E E 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3937
Protein: lcl|KC353356.1_cdsid_AGH24315.1 [gene=atp4] [protein=ATP synthase F0 subunit b] [protein_id=AGH24315.1] [location=61363..61938] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.04
3938 TTTCGTATTTTTCCTACTTTTTTAATTGTAGATGAGAAAATTGAGCCCTTAATAGTAAATCTTGAAATGACGTTGTATTTTTATGGCAAA 4027
1 M L S F L Q N K H V T L T L L V F L V A I L T T R Q F I I V 30
4028 AATACAGATAATAAAAGTATTGTAGAAGAAATCATATTT---ACG---CAATATGATTTAACAAAAAATATATGGTCCGAAAATTATTAC 4111
31 H D E T L V L L C F V L F L T F L Y V A L K D M V T A T F N 60
4112 CAATATCCTTTTAATGTGGATCAAGAATTTTTACGTCAACTTTCTATTATTTTTTATAGTAATAAATTACAAGAACTTCAACAGGATTAT 4201
61 D R A L Q I E K E F N D L Y S L K E Q T L Q L L A N H H E K 90
4202 AAA---GAACTACAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAAGACTATAATAAGGAAATAGAT---CGCCTTAATGAATTA 4285
91 Q V S L L S E I D S L M L F T K S E V N N I I Q T R Q A A L 120
4286 AAAACAAATTATTTGAAAGATAGAAAATATAAACAATATTTTAATTCATTAACAGATGAAGAACAAAAATTAGTTTCTCATATAAAAATT 4375
121 R S K L I A E - - F R N K L N T A L K K E D A F F Q F I Q Q 148
4376 TTTCAAGATAAGATTAAAGATGATAATATACAAAATGAAAAAAAACAAAAGAAAGAACTTATTAATCAACTTTTGGAAAAAAATAAAAAA 4465
149 S T N N I V M N N I L E N I N G S G G D I L K A T S F E E G 178
4466 GGAAAAGATAAAGAAGAAGGAACAGAAATTTTAACTGCA 4504
179 I R I L E E G A N A T E E 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4118
Protein: lcl|KC353356.1_cdsid_AGH24315.1 [gene=atp4] [protein=ATP synthase F0 subunit b] [protein_id=AGH24315.1] [location=61363..61938] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
4119 CTTTTAATGTGGATCAAGAATTTTTACGTCAACTTT---CTATTATTTTTTATAGTAATAAATTACAAGAACTTCAACAGGATTATA--- 4202
1 M L S F L Q N K H V T L T L L V F L V A I L T T R Q F I I V 30
4203 AAGAACTACAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAAGAC-TATAATAAGGAAATAGATCGCCTTAATGAA---TTAAAA 4288
31 H D E T L V L L C F V L F L T F L Y V A L K D M V T A T F N 60
4289 ACAAATTATTTGAAAGATAGAAAATATAAACAATATTTTAATTCATTAACAGATGAAGAA---CAAAAATTAGTTTCTCATATAAAAATT 4375
61 D R A L Q I E K E F N D L Y S L K E Q T L Q L L A N H H E K 90
4376 TTTCAAGATAAGATTAAAGAT---GATAATATACAAAATGAAAAAAAACAAAAGAAAGAACTTATTAATCAACTTTTGGAAAAAAATAAA 4462
91 Q V S L L S E I D S L M L F T K S E V N N I I Q T R Q A A L 120
4463 AAAGGAAAAGATAAAGAAGAAGGAACAGAAATTTTA---ACTGCAAAACAAAAAAAGGAGAAATATCTAAAG---GATAAACAAAATATA 4546
121 R S K L I A E F R N K L N T A L K K E D A F F Q F I Q Q S T 150
4547 AATAATATCGATGAAAAGAATAATTGATTATTTTTTAATAATATATTATTATTTATTATTATTTATAGGTCTAATAATGACATCTTGGAT 4636
151 N N I V M N N I L E N I N G S G G D I L K A T S F E E G I R 180
4637 AATTTGGAGTAGATTTATTCGATCTCGTACTAT 4669
181 I L E E G A N A T E E 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10039
Protein: lcl|KC353356.1_cdsid_AGH24315.1 [gene=atp4] [protein=ATP synthase F0 subunit b] [protein_id=AGH24315.1] [location=61363..61938] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.02
10040 CGACCAAGTCTTGTAATATTATCGCAAATT---ATTTCACTTTGTGTA---TTAATGTATGTTTTTTACATTTATAACTTAGTTATAAAA 10123
1 M L S F L Q N K H V T L T L L V F L V A I L T T R Q F I I V 30
10124 TACAAATTTTACAAAATTTATTTATTTATGTGCCAATTTGAAACTTTTATAAAAATATGT------GACATTTTTACAGGTGGATATCGA 10207
31 H D E T L V L L C F V L F L T F L Y V A L K D M V T A T F N 60
10208 TTCTATGAACTTTTATACGATAAC---TTACATGATTTTATTTATATTAAACTAAAACCAATTAATAAAATA---AACTCTTCTTATTTA 10291
61 D R A L Q I E K E F N D L Y S L K E Q T L Q L L A N H H E K 90
10292 CAAGTG---CTAATGATAATACTATGCAATAAGATCTTGTACATATATGCTTATATAAAAAATATCTTCTATATTTTACGAGCATTTTTT 10378
91 Q V S L L S E I D S L M L F T K S E V N N I I Q T R Q A A L 120
10379 ---CCTGAAATTTTATTA---TTTATAAGTTTGATATCTGATTTAAATAATAGAGAAATAAAAACATTTTATTATATCTTAGCTATATAC 10462
121 R S K L I A E F R N K L N T A L K K E D A F F Q F I Q Q S T 150
10463 CCATTAATGACATCTTATAGGACCATTAAAGAAATTCTAGGAGACTAT---GATATGTTAAATATAAATGAT---AAATTAACTACATAT 10546
151 N N I V M N N I L E N I N G S G G D I L K A T S F E E G I R 180
10547 TTTTATGAAGATAAAATACACGATAAATTGAGA 10579
181 I L E E G A N A T E E 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10861
Protein: lcl|KC353356.1_cdsid_AGH24315.1 [gene=atp4] [protein=ATP synthase F0 subunit b] [protein_id=AGH24315.1] [location=61363..61938] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 53 Length-adjusted: 0.28
10862 ATAATAAAAATATTATATTATACTAATTTAATATTGGTAATATATATATTTATAATAATATATTTGTCAAGGAATACATTATATTTTATA 10951
1 M L S F L Q N K H V T L T L L V F L V A I L T T R Q F I I V 30
10952 ACCGATAATATACATATATTC---AATTTTGAACTTATTCAAGAATTTAGCCAAAAAGAAAAATACGACTTTTTCATAAAATATTTAAAT 11038
31 H D E T L V L L C F V L F L T F L Y V A L K D M V T A T F N 60
11039 ---TATACCCTGTATATGGAACGAGAATTTCATTCTATACGTACATCAACCTTTTTAAATACAATAATGTCTGATAAAAACTATTATGAA 11125
61 D R A L Q I E K E F N D L Y - S L K E Q T L Q L L A N H H E 89
11126 AATTTATTATTATCCCTA---GATATTAATACAATTAAAGTATTGGCAAAAGAATTACTTACAATTGCTATTATAGTAGAAGATCGTTTT 11212
90 K Q V S L L S E I D S L M L F T K S - - E V N N I I Q T R Q 117
11213 ATAGAATTAGATGAAAAGCTAATGATTGAAACTATATCAGAATTGATAGAAGAACTCAGACAAGAGGAA---TTACAAAGAATTATAGAT 11299
118 A A L R S K L I A E F R N K L N T A L K K E D A F F Q F I Q 147
11300 AAAAATCCAATTACTAAAATATATAACAAAATAGGAGAATTCTTAAATAGTCAAAAATTTGA----ATGGATATGATGGGTTTTTTAAAA 11385
148 Q S T N N I V M N N I L E N I N G S G G D I L K A T S F E E 177
11386 ---TTG---TTATTAACAGAT---CCTTCTTCACACAAAAAA 11418
178 G I R I L E E G A N A T E E 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15151
Protein: lcl|KC353356.1_cdsid_AGH24315.1 [gene=atp4] [protein=ATP synthase F0 subunit b] [protein_id=AGH24315.1] [location=61363..61938] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 28 Length-adjusted: 0.15
15152 CTTAATTATTTCATAAAAAATAAA---ATTACTATGGATTTCGAAATATATGATAAAATGAAAGCACTTTTTGCAAATTATCTTTCAGCA 15238
1 M L S F L Q N K H V T L T L L V F L V A I L T T R Q F I I V 30
15239 ---GATTCTACATTACAAAATATGAGCTTTGATTTATTTGAAAAACAAACTAAA---GATTTACAGGATGAACATTTAGCAAGCTTTTTC 15322
31 H D E T L V L L C F V L F L T F L Y V A L K D M V T A T F N 60
15323 AATAAAAGTACACCATTAATACAACATAGCTTAAGTTTTGATTATTTATCTAAAATG---ATACACATAATTAAAAATTATGCTAAAAAA 15409
61 D R A L Q I E K E F N D L Y S L K E Q T L Q L L A N H H E K 90
15410 CCTGGGGAGATATTAAAT---ATTCTTAGTATT---TTATATTATAAA---GAAAAAAATGCTTTATATAACAATAGTGAACTTGTTATA 15490
91 Q V S L L S E I D S L M L F T K S E V N N I I Q T R Q A A L 120
15491 TTTTTAGATAGTACAATGAGCGGGTCTCAACATTTAGCAACAATATTTAAAAATAAATTAGCAGCTAAAAATAGTTGTTTAATTTCTACA 15580
121 R S K L I A E F R N K L N T A L K K E D A F F Q F I Q Q S T 150
15581 GATGAAACTAAATTTGACTTAAATATTAATTGCCTTGAAAAATTTCAGCTATTTATTACAAAAGCATTATCTGACGAAACTTCTAAGTAT 15670
151 N N I V M N N I L E N I N G S G G D I L K A T S F E E G I R 180
15671 TTAGCTAAATTTGACATAAACCGTAATGATTTA 15703
181 I L E E G A N A T E E 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16141
Protein: lcl|KC353356.1_cdsid_AGH24315.1 [gene=atp4] [protein=ATP synthase F0 subunit b] [protein_id=AGH24315.1] [location=61363..61938] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.11
16142 GATATAAAC---CTTTCTTATATTCACATATTTTCTGATATATTATCTAAATATTATAAATATTTTTATAAAACTAATTATTTACCTTAT 16228
1 M L S F L Q N K H V T L T L L V F L V A I L T T R Q F I I V 30
16229 TGTGATACTTATTTAACATTACGAGAATTTCTAAAGAAAATGGAAGGTCCTTTAACAATGTCAACAGAATTTTTAACATGGTCATATAAT 16318
31 H D E T L V L L C F V L F L T F L Y V A L K D M V T A T F N 60
16319 CCAAGAAAAATGAAAATATTACGTATAAATGTTGTAAAATATTCAAAAATAACAAATGACCTTAAATCTTTGAAACGACGTATGATTAAC 16408
61 D R A L Q I E K E F N D L Y S L K E Q T L Q L L A N H H E K 90
16409 GTAGCATATTTTACAGGAAAAATTGATCAAACTAAAATATATAAC---TCAGTTTCTGCTTTTATTATACATACAGAGGAAGCCCGATTA 16495
91 Q V S L L S E I D S L M L F T K S E V N N I I Q T R Q A A L 120
16496 ATGATGTATTTTATATATTCC---TCACAACAACTTAATAAAGCTTTACACGAAAATTTAGGTATATCTTATTATTATACTCAAAATTAT 16582
121 R S K L I A E F R N K L N T A L K K E D A F F Q F I Q Q S T 150
16583 GATTGTTTTGGAATTAATTATAGTTTTATTGTCTTTTTGAAAATTCAGTTAAAATTAAATTATAAAACTTGTTATACTCATGAATTATTT 16672
151 N N I V M N - N I L E N I N G S G G D I L K A T S F E E G I 179
16673 CCTTCTCTTTTTAAAATTCTCAATACAACAGATCCT 16708
180 R I L E E G A N A T E E 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61693
Protein: lcl|KC353356.1_cdsid_AGH24315.1 [gene=atp4] [protein=ATP synthase F0 subunit b] [protein_id=AGH24315.1] [location=61363..61938] @ 0
DNA length: 1146 Protein length: 191
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.07
61694 AAAAAAATATTTTTAAATAAAAAATTTTTTCCAATATTATTTTTTATAATAATATTAAAAATTTTATTAATACGTGAAATTTTTTATTTT 61783
1 M L S F L Q N K H V T L T L L V F L V A I L T T R Q F I I V 30
61784 CATGAATTAATTACATATTTAAAAATAATACCTATAAAATTTGATAAAATTTCTTTAATTTTTGATAATTTACAAAATATTAATCTTATT 61873
31 H D E T L V L L C F V L F L T F L Y V A L K D M V T A T F N 60
61874 AATTATGATTTTAATAAAAAAAACGAAAATATGATTTTATATCAATATGCTATAATTTTCCCTATGATTTATAAGGGAAATACAAAAAAT 61963
61 D R A L Q I E K E F N D L Y S L K E Q T L Q L L A N H H E K 90
61964 TTTATTTGTAAAAAAATTACCATAAAAAATTTTATCCGTTTTTATCCAGGTCATGTGAATAAAATTATCAATATTATTAATACTTCTCTA 62053
91 Q V S L L S E I D S L M L F T K S E V N N I I Q T R Q A A L 120
62054 AAA---AAAGTATCACCACAAGCACTTATTGAACAAAATCGAATAGAAGCTAATAAAATGATTATTTATGCATTCTGCGAACATTTTAAA 62140
121 R S K L I A E F R N K L N T A L K K E D A F F Q F I Q Q S T 150
62141 AATGATAACTTATCTGATTTATTAGATGATCACAAAATTATTAATCGTATGCATGATTTTATTCATAAACAACCAACTCTTAGTTCA--- 62227
151 N N I V M N N I L E N - I N G S G G D I L K A T S F E E G I 179
62228 AGAGCATTTCAATTAGCATTGGAAGTTTCATATTCT 62263
180 R I L E E G A N A T E E 191
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59920
Protein: lcl|KC353356.1_cdsid_AGH24316.1 [gene=cob] [protein=apocytochrome b] [protein_id=AGH24316.1] [location=62088..63260] @ 0
DNA length: 2340 Protein length: 390
1 Nt shifts: 26 ||| 2 Nt shifts: 0
Score: 79 Length-adjusted: 0.20
59921 ------------------------------------------------------------------TCC---TTA------TGG------ 59929
1 M R L L K R P L I R E L N N F I V D Y P T P S N L S Y W W N 30
59930 ------------------------TTG------------GTT------------------------TAT---CCG--------------- 59941
31 F G F I A A F C L I T Q I V T G I F L A M H Y T P H V D L A 60
59942 ---ATATCT------CAT---------------------------------------------GCTAATGGTGCTTCTTTTTTCTTTATT 59977
61 F I S V E H I M R D V N Y G W L M R Y I H A N G A S M F F I 90
59978 GTAGTATATGCTCATCTTTTTCGCGGTTTGTATTATGGTTCATACTTTTTTCCG---CCGATTATTATGGTGCTCGGAGTAATTATTTTA 60064
91 A V Y I H M F R G L Y Y G S Y A S P R E F L W I I G V I I L 120
60065 TTATTAATGATTATTACTTCTTTTTA-GGATATGTTTTACT-TGGGGACAAATGTCTTATTGGGCAGCTACGTT-ATTACTAATTTAGCT 60151
121 L I M I L T A F M G Y V L P W G Q M S F W G A T V I T N L A 150
60152 CT-ACTGTTCCTTC-TTTGGTCAAAAAATTGTAAATTGGCTTGG-AGTGGTTTTTCTGTAGATAATCC-TA-CTTAGCAAATTTTTCTCT 60236
151 S A V P Y I G E H I V H W L W G G F S V D N A T L N R F F S 180
60237 TTACATTATAT-TTACCTTTTGTATT-TTAGCTTTTGTTTTATTACATTTAGC-CTTATACATCAATCTGGTAGTGGTACATCTTCAGGG 60323
181 L H Y L L P F V I A G L V G L H L V V L H E D G S N N P L G 210
60324 TGGGGCCGCTCTATTGATGAAATTCT-TTTCATCCTTATTATAC-ATTAAAGATTTTTTTAGTGTAATTTTATTTATAGCCATAATTATA 60411
211 I D S K V D K V P F Y P Y Y Y V K D L F G I V V F G L F F S 240
60412 TTCTTTGTTCTTTTATACCT-AATAG-CTAGGTCATCCAGATAATTATATTCCTGCAAT-CCTGATCAAACTCT-GAGCATATTGTTCA- 60496
241 V F V F F Y P N L L G H P D N Y I E A N P L V T P P H I V P 270
60497 GAATGGTATTTTCTACCTTTTTATGCATC-CTTCGATCTATTCT-AATAAATTATTAGGTGTTATTGCCCTTGTTGCTAGTATCATTTC- 60583
271 E W Y F L P F Y A I L R S I P N K L L G V V A M L V S I L I 300
60584 TTATTAATATTACCTTTTATAGATGTCCT-TTAACCCGTAGT---CTGTTTATAAGCATTTATTGCTAAACTTAATATTTTATTTATGCT 60669
301 L I A L P F L N T S E I R S S Q F R P I H R K L F W L F F V 330
60670 GATTGTTTTGTTTTAGGTTATAT-GGTCAAAGTCCTCTTGAAGAACG-TTCTTATTTTTAGGACGTTTAACAACCTTATATAC-TTTGCC 60756
331 D C V I L G W I G G N V P E T P Y L E I G Q I A T V F Y F A 360
60757 TATTTCTTTGTATC-ATA---ATTGTAAGTCAAATTGACCGTTATTTTCTTAAAGCT---GTTCAAAAACTCCCTGATAATATTGTTTAT 60839
361 Y F L V F I P V L G K L E T Y L L G L D T N Q Y K K H L I K 390
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59920
Protein: lcl|KC353356.1_cdsid_AGH24316.1 [gene=cob] [protein=apocytochrome b] [protein_id=AGH24316.1] [location=62088..63260] @ 0
DNA length: 2340 Protein length: 390
1 Nt shifts: 32 ||| 2 Nt shifts: 0
Score: 846 Length-adjusted: 2.17
59921 TTACAATGCGTAAGTAAAAAGATCCTAGGATTTATATATGATACAGCCATAACTTATCCAGCC---TGCAACTTTGAATTATAATATAAC 60007
1 M R L L K R P L I R E L N N F I V D Y P T P S N L S Y W W N 30
60008 TTTGGTAT-ATATGCTT-AGTTGTATTGGCATACAAATTATTACTGGTATTTTTCTTGTTATGTTTTATTGCTCAAATGC-ATTTTAGCT 60094
31 F G F I A A F C L I T Q I V T G I F L A M H Y T P H V D L A 60
60095 TTTTTAAGTGTTGAGCATTT-ATGAGAGATGTCCT-TATGGTTGGTTTATCCGATATCTCAT-GCTAATGGTGCTTCTTTTTTCTTTATT 60181
61 F I S V E H I M R D V N Y G W L M R Y I H A N G A S M F F I 90
60182 GTAGTATATGCTCATCTTTTTCGCGGTTTGTATTATGGTTCATACTTTTTTCCG---CCGATTATTATGGTGCTCGGAGTAATTATTTTA 60268
91 A V Y I H M F R G L Y Y G S Y A S P R E F L W I I G V I I L 120
60269 TTATTAATGATTATTACTTCTTTTTA-GGATATGTTTTACT-TGGGGACAAATGTCTTATTGGGCAGCTACGTT-ATTACTAATTTAGCT 60355
121 L I M I L T A F M G Y V L P W G Q M S F W G A T V I T N L A 150
60356 CT-ACTGTTCCTTC-TTTGGTCAAAAAATTGTAAATTGGCTTGG-AGTGGTTTTTCTGTAGATAATCC-TA-CTTAGCAAATTTTTCTCT 60440
151 S A V P Y I G E H I V H W L W G G F S V D N A T L N R F F S 180
60441 TTACATTATAT-TTACCTTTTGTATT-TTAGCTTTTGTTTTATTACATTTAGC-CTTATACATCAATCTGGTAGTGGTACATCTTCAGGG 60527
181 L H Y L L P F V I A G L V G L H L V V L H E D G S N N P L G 210
60528 TGGGGCCGCTCTATTGATGAAATTCT-TTTCATCCTTATTATAC-ATTAAAGATTTTTTTAGTGTAATTTTATTTATAGCCATAATTATA 60615
211 I D S K V D K V P F Y P Y Y Y V K D L F G I V V F G L F F S 240
60616 TTCTTTGTTCTTTTATACCT-AATAG-CTAGGTCATCCAGATAATTATATTCCTGCAAT-CCTGATCAAACTCT-GAGCATATTGTTCA- 60700
241 V F V F F Y P N L L G H P D N Y I E A N P L V T P P H I V P 270
60701 GAATGGTATTTTCTACCTTTTTATGCATC-CTTCGATCTATTCT-AATAAATTATTAGGTGTTATTGCCCTTGTTGCTAGTATCATTTC- 60787
271 E W Y F L P F Y A I L R S I P N K L L G V V A M L V S I L I 300
60788 TTATTAATATTACCTTTTATAGATGTCCT-TTAACCCGTAGT---CTGTTTATAAGCATTTATTGCTAAACTTAATATTTTATTTATGCT 60873
301 L I A L P F L N T S E I R S S Q F R P I H R K L F W L F F V 330
60874 GATTGTTTTGTTTTAGGTTATAT-GGTCAAAGTCCTCTTGAAGAACG-TTCTTATTTTTAGGACGTTTAACAACCTTATATAC-TTTGCC 60960
331 D C V I L G W I G G N V P E T P Y L E I G Q I A T V F Y F A 360
60961 TATTTCTTTGTATC-ATA---ATTGTAAGTCAAATTGACCGTTATTTTCTTAAAGCT---GTTCAAAAACTCCCTGATAATATTGTTTAT 61043
361 Y F L V F I P V L G K L E T Y L L G L D T N Q Y K K H L I K 390
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 210
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.32
211 TTACTTAATTCCTTTTTATTGATTAAACTTATTTTATTTATTTTAATTAGAATTTTT---CTAATTCCAAATATTTTTTCTAAATATATA 297
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
298 ATT---ATTATTTTTTTTAGTATTATTATATACATATGTTATAAATATCCTCGTACCAATATATTAATTAAGGAAGATTTATTCGAATAT 384
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
385 GCTTTAAAA 393
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 411
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
412 ATAAATATATGTATCATAACGTTATATATATTTACTTTTGTTATAGGTATATTTTATCTTAGATATATAAATATAACAAAAAAAGTAGAC 501
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
502 TTAAAAATTTATTATATAATG---CTAAAAAATCTTTTTACTGAATTTACAAAAGAAGAAATTATTTTAAATGTGGTAATAATAATAACT 588
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
589 TTTATAATA 597
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 633
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
634 TTTAAATTACAAGTAATTAAAAGACATCTTTACTTAATAGGAATACCATTAAATAATAATTGGTATTCAACCGTTCATCGAAAGTATTTA 723
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
724 TGGCCTTTAGCAAATTCTTTTCTTAAAATAAGTATAAAACATAAAATT------GAGTTATTGTATAAAAAATATTATTTTGATAAAAAG 807
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
808 CCTCATAAA 816
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 918
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
919 ATGTCTATTTTCATAGATAATATTTTAACAAAAGGTCATTATTTTATATTAATTATTAGTATTCTATATGATGTTATAAATAAT---GAT 1005
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
1006 TTTATTTTGACTACTATATTTCAAATATTACCTTGGATA---TTTTTTTATGAACTTTTTCTAAGAATATCTAAATTTGTAGATGACATT 1092
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
1093 TGGATACCA 1101
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1364
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
1365 ATAATAATAGGTATA---CAAATATTATGGTCATATTATATGCATGTAGAAGTTATC---AAA---GATAAT---GATAATAATTTATTA 1442
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
1443 AAAACATTGCCTTCAATAAAG---ATTATTCATAATTATTTTCTGTATAAAAGTAGTTATTTATATGAAGCTGGTTCAATATGTAAATCT 1529
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
1530 TTATATAAA 1538
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1646
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
1647 CCTTCTGATGATATTAATGATATGATACCAGTACAAATGCAAGATATACCTGTTAAATCCAAAGAGCCTAAAATAGAATATCCTAGAAGA 1736
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
1737 CCTAATATTGATCTTAAACGTGAAACAATTATCCCTAGATTTGAAATTGAAACTGAAACAATACCACCTACAATA---GTAAATCCACCG 1823
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
1824 GATGTTATT 1832
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1836
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
1837 ATGATTTACCTTTTGAAGAACCTGTTGAGGAGCCTATTGAA-ATAAAAGTAGAATTTTTTAATGCTTATACGGATCTTATG---AATATA 1922
1 M S V G I G Q I L V V L L L V - V L L F G K F P N L S K N F 29
1923 GAAGATGTAGATAGTGTAATTTCTCCAAGTTTTGAAGGCTCTCGT---ATTTATAGTGACGATGCAATTTTTCAGTTACATTTAGATATT 2009
30 T D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
2010 ACTGAATTTGTT 2021
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2036
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
2037 GTTTCAACAGAAGATATATCTGTAACAATTATACGAAATACAGTCCATGAATATTTTATAAAA---AGTAATTTAAATAGTAATCTTACA 2123
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
2124 CCGTCTGATTTGCAAAACACTAATCATTTAATTAATTTATTACTTAAGGAACTAATTGTCAATAGTTTTTTTGCCGCTGACAACGAAAGT 2213
31 - D G L T N I R N V L E - Q K K E I T S D N I K K K E D I D 58
2214 TTTATAATGAAACAA 2228
59 K T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2384
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
2385 ATTTTTTTACAAATA---AAATTTCTTATAGTAATTTTATCCGTTTTTATCCTG---GCAATTTAGGGAAAACACAACCAAAATCTATTA 2468
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
2469 AAGAAATGCCTGAGAGTAAAACAC---CTCAAGAAATTACAAAATATTTTCCATCAG---GTACAACATTACAAGATCTTGAAGAAGTTG 2552
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
2553 CACAAGATG 2561
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2774
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.33
2775 ATG---TTGAATTTAAATTCCATAAACCTGAGTCTGATAATTATACAGTGCCTATTACAGCCGTTTATGATACAAAACAAGGATCATCC- 2860
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
2861 GATATTCAATATAATTTAGAAAAAATAATTAAAGATTTGAAAATAGCTATACAGGAAAAATCTTTGAATAAAGAACAAGTAAAAAGCATT 2950
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
2951 ATTGATGAT 2959
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2951
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.21
2952 TTGATGATATTCGTA---AAAATTATGTTACTAAAGGGGTTAGTATAGAGAATGCTAATGAACTTTTA-ACTCTTTGGAAGTCTTATGAT 3037
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
3038 TTTCAATATGAACCTTTAAAACAAATTTGTAAAATTAAAAAAGATATTATTATAAATAAAGAACAAGAAAAAATTGTTATAGATTCTAAA 3127
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
3128 TCATCTTAT 3136
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3082
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 46 Length-adjusted: 0.73
3083 ATTATTATAAATAAAGAACAAGAAAAAATTGTTATAGATTCTAAATCATCTTATGAAGAAAAATTGAAAAATTTAGAAGAAAAAATGTCA 3172
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
3173 ATAGCTCTTAAAAATATAAATAATTTTCTTGAAAAAAATAAAGATTATACTAAAGAATTTCTTGAAGCAAAAGAATTACAAGAATGGTAT 3262
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
3263 GATTATTTT 3271
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3559
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
3560 TTATCCATTAATTCTTCGGCAGTTACTATAGATACAGAAGGTGTTATTAAAATATCACAAGAGGCGTATCAGTCTTTTACTAAA---TAT 3646
1 M S V G I G Q I L V V L L L V V L L F G K - F P N L S K N F 29
3647 AAAGATAGCTTA---GGATTTAAATATTTATTAGAATATCCAAAAACA---GAAGAAATATTATTACGTATAAAAGAAAGGAATTTTTTT 3730
30 T D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
3731 ATTGCTAAAAAT 3742
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3742
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
3743 ATGGATTCTAATCCTAATGGAATTATTGCTTTAGCTCACCTATCACATAATACATTA---ATTATTCCAAACCAAACCGAGAAAAATTTA 3829
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
3830 TATGTTAGGGTAGGGCTTGTTACTAGTACTAAAAGTGATTCTAATATTAAAATTGATAGTTATCAAGTTACTAATGAGGATTCTAATAAA 3919
31 D G L T N I R N V L E Q K K E I T S D N I K - K K E D I D K 59
3920 CAAAATAAAGAT 3931
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3964
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.24
3965 GTAGATGAGAAAATTGAGCCCTTAATAGTAAATCTTGAAATGACGTTGTATTTTTATGGCAAAAATACAGAT---AATAAAAGTATTGTA 4051
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
4052 GAAGAAATC------ATATTTACGCAATATGATTTAACAAAAAATATATGGTCCGAAAATTATTACCAATATCCTTTTAATGTGGATCAA 4135
31 D G L T N I R N V L E Q K K E I T S D N I K K K E - D I D K 59
4136 GAATTTTTACGT 4147
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4114
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 34 Length-adjusted: 0.54
4115 TATCCTTTTAATGTGGATCAAGAATTTTTACGTCAACTTTCTATTATTTTTTATAGTAATAAATTACAAGAACTTCAACAGGATTATAAA 4204
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
4205 GAACTACAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAAGACTATAATAAGGAAATAGATCGCCTTAATGAATTAAAAACAAAT 4294
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
4295 TATTTGAAA 4303
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4240
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
4241 AGTCACGAAGACTATAATAAGGAAATAGATCGCCTTAATGAATTAAAAACAAATTATTTGAAA---GATAGAAAATATAAACAATATTTT 4327
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
4328 AATTCATTAACAGATGAAGAACAAAAATTAGTTTCTCATATAAAAATTTTTCAAGATAAGATTAAAGAT---GATAATATA---CAAAAT 4411
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
4412 GAAAAAAAA 4420
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4361
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
4362 CTCATATAAAAATTTTTCAAGATAAGATTAAAGATGATAATATACAAAATGAAAAAAAACAAAAGAAAGAACTTATTAATCAACTTTTGG 4451
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
4452 AAAAAAATAAAAAAGGA-AAAGATAAA---GAAGAAGGAACAGAAATTTTAACTGCAAAA---CAAAAAAAGGAGAAATATCTAAAGGAT 4534
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
4535 AAACAAAAT 4543
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4691
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.14
4692 TTAACAGAATATCGCTTTTGGATTTTAATTTATATTTGT---TGCATATATATATATAGT---ATTAAAAATATTCTGAAGGCTTCAGGA 4775
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
4776 GATAACTATCTTAATTTAAAAGATATTATAGAGATATTGTATGCACCTTTGAAA---ACTATAGATCATGCTATTAAATATAATAAATAT 4862
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
4863 ATTAAACCT 4871
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5000
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
5001 ATAGATACATTTTATTTTAATAAATTAGAAATATTTTATAAATTTGTATTATTG---GGCTTATTTCCTTTTATTTTTAGATATTTTAAA 5087
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
5088 TATTCTTTAAAAGATGTTTATGAACACTGGATTGTAGAATTGGAAAATAAATATTCGTTAGTAAGAATTTATGAAGTTGGATATAAATTT 5177
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
5178 GATGATTCT 5186
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5570
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.24
5571 TATCCTATAGATTTAATTATGAGTAAATATCTTTTATTAAATTTTATGTTATATTTGGTGAAAGAAGAAAATCCATTTATGGATTTCGAT 5660
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
5661 AGCGGTTCACATAAT---AAAAATCTATTAACAATAGAAAAT---ATTAAAAAGATATTATGCAAGATTATAAAAAATATTATACAAAAA 5744
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
5745 TGGTCAAAA 5753
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5758
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 37 Length-adjusted: 0.59
5759 ATAAAAATAATAATGCAAATGATAATAATAATTTTAATAAATATATGTAAAATTATTACTTTCAAAGTAAAAGCAGATGAAAAAAATCAT 5848
1 M S V G I G Q I L V V L L L V V - L L F G K F P N L S K N F 29
5849 CAGGAAGTCTTTGAAAATTTTAGAAAAATACTTAAAGAAGGTTTGTTTAATATATTAGAAAAGTTGGATTGTCTTGAAGAT---TCACAA 5935
30 T D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
5936 ACAATGAAGGAA 5947
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5938
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.43
5939 ATGAAGGAAATAGTAGAAACATTTATGGATAATTTAATGCTGGAAGAATTATATATTAAATACCTTGCAAAAGATGAAAAAGATTATGAA 6028
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
6029 GGTTTTATGAAAGAAATTCAATCATTATTAAAGGATTATCTTCTAAGACTTCAAGAAATGAAAAAATTCAAAGAAAATATGAATAAATTC 6118
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
6119 ACCTTACGA 6127
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6178
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
6179 ACGTCATTATTTTTAAACAGCATATATATATATCTATTTGCTAACAAATATTTA---AAAGAATTTGAAGAACAAAGTTCGGAT---AAG 6262
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
6263 AATTTTGAAGTAATTTTTCCTTTAATTTTGAATTATATTTTAACAACATTTTATGATGAAATACAAAAAAAACAAAAGAAAGATGA-TTA 6351
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
6352 ATAAGAAAA 6360
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6583
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.43
6584 TGCGTCAACAATGTAAACAGCATCATAATAAATATATTACTGATACAAAA-ATACAAACTAGACATAGAGGTTTAAGC---AAT---AGA 6666
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
6667 GAA---TTACAAGGTATTCGATCTCCATTGAGTAGTAAAAAGTTTAAGGAGGTAAATAATATTGATATGAAAAATCCTTTTCAAAACTCA 6753
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
6754 CAAAAAGTG 6762
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6621
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
6622 ACTGATACAAAAATACAAACTAGACATAGAGGTTTAAGCAATAGAGAATTACAAGGTATTCGATCTCCATTGAGTAGTAAAAAGTTTAAG 6711
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
6712 GAGGTAAATAATATTGATATGAAAAATCCTTTTCAAAACTCACAAAAAGTG---TCAGAACCTTTTTCACCTCTTACAAGTATAACTAAA 6798
31 D - G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
6799 ACCTGTAAAACA 6810
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6984
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.27
6985 CCGTCTACTACTGTTTTAAATGATTTCTCTAAAATAGATAATACTTCTTCAAGCGTAAAACCAATTCCTGAATTA---AAAAAT---CCA 7068
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
7069 GACGGTGTTATATATACTACTAATATTACTGAA---AAAACAAGTATG------GAAGAATTAACCAAGCAGCAACTTATTGATGAATTA 7149
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
7150 AAAAAACGT 7158
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7003
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
7004 ATG---ATTTCTCTAAAATAGATAATACTTCTTCA-AGCGTAAAACCAATTCCTGAATTAAAAAATCCAGAC---GGTGTTATATATACT 7086
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
7087 ACTAATATTACTGAAAAAACAAGTATGGAAGAATTAACCAAGCAGCAACTTATTGATGAATTAAAAAAACGTAACTTGATAAAAATAACA 7176
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
7177 AAATCTCCT 7185
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7183
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
7184 CTGCAGTTATTATTGAAACAGAAAGTGATGGTCATATACGTATTGGTAATAAAGATAATGATTTA-ATATTTACGAAACACGGGCGAGCG 7272
1 M S V G I G Q - I L V V L L L V V - L L F G K F P N L S K N 28
7273 TATTTAGAA---TTACAGCCAAAAAGTCAAATTTTTATAAATCCTTTAGAAATCACCAAAGAAAATATTACTCTT---GATGATTTAAAT 7356
29 F T D G L T N I R N V L E Q K K E I T S D N I K K K E D I D 58
7357 AATTTTTGTATTATT 7371
59 K T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7614
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
7615 CAAGTATTAGATAAAAATGAGGCTTATGTAGCCAAGTTTGATCAAGACTATTTTTTTACAATGAGTCTTAATGTAAAAAAGGATTTAGTA 7704
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
7705 GATAATTATAATAACTTAAAAACTAAACATTATGAGAAATATATGCCACAAACAATATCAAATGAACAATTATTAAATATGTGCAAAGAT 7794
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
7795 GTTGACAAA 7803
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8126
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
8127 CCTAAAGTACCACCTCAATTTATACTTAATGTTTTGGTATCTATTATAAATACTGTAAAATCTTTTGACAATTATACGAAACAATTTAAT 8216
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
8217 CTTATTTCCAATACCTATATAAAAATATTTACCTATATAGCAAATAAAATTAATTATTATAATGTCATTTTATGGGAAAAAATCTTACTT 8306
31 - D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
8307 ATT---ATAAAT 8315
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8129
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
8130 ---AAAGTACCACCTCAATTTATACTTAATGTTTTGGTATCTATTATAAATACTGTAAAATCTTTTGACAATTATACGAAACAATTTAAT 8216
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
8217 CTTATTTCCAATACCTATATAAAAATATTTACCTATATAGCAAATAAAATTAATTATTATAATGTCATTTTATGGGAAAAAATCTTACTT 8306
31 - D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
8307 ATTATAAATACT 8318
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8682
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.14
8683 TTATACGTCCAACAATAGAATGGTATAATAATTTATTTAAAGAATATAATGTTACCTGGAAATCTTGTGGAGATATA-AAAAAC---ACC 8768
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
8769 ATTATCGAAAAGGATCTTAATTTAATAATTAGATTAAAAAGTATTATAACAACACATGAGATAATTACTAAATGGACAAATGTACAACAA 8858
31 D G L T N I R N V L E Q K K E I T S - D N I K K K E D I D K 59
8859 AATATAAAAAAT 8870
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8876
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
8877 ATTATAATATATATAGGATATTTAATATGCTGGGCTTATATATTATACGTAAGTTTATCAAATTTTAAAGATTTTTATATG---TTATCA 8963
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
8964 TGTATAATTGAAGTGATAAAAACTCATCTTCTACAAGGTAAAGTCCCACTAAAATTATGTATATTTTTATTAATTATAATTTTTTATAAT 9053
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
9054 GAAAAAGAA 9062
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8942
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
8943 AAAGATTTTTATATGTTATCATGTATAATTGAAGTGATAAAAACTCATCTTCTACAAGGTAAAGTCCCA---CTAAAATTATGTATATTT 9029
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
9030 TTATTAATTATAATTTTTTATAATGAAAAAGAACAAAAAGATAATTAATATTATGATAATATGGGTTTTACTTACAGATAGAGTAAAAGA 9119
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
9120 AAGGAATAT 9128
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9555
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.32
9556 ATTGAAATTAGTCTTCAACATGATAATATTTGTTTGCACACTTTCCATTTATTACTTATTGAAGAAATATTTCTA---CAAAACTTTCAA 9642
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
9643 GATAATATTGAACCATTTTCTGATCTCTTACTTAAAGATGAAAATGAAAGTAATAAATTTTATAAACAAAAAATGTTATTAATAAAAGAT 9732
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
9733 ACTTATAAT 9741
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9739
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
9740 ATGTTTAACAAATTATTTTTCATATTACAGATATTAATAAAATTTAAATATTATTTCATGATATTTATTGTTTTAACACTAAGTTTATGT 9829
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
9830 TTTGCAATTATTATACATTATAATTATAATAAAAATAAAAAACTACTAATTAATAAAAAACAAGAGCTTTCTAAACTATTAGATTATTTA 9919
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
9920 TATATCAAA 9928
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10105
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.22
10106 TATAACTTAGTTATAAAATACAAATTTTACAAAATTTATTTATTTATGTGCCAATTTGAAACTTTTATAAAAATATGTGACATTTTTACA 10195
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
10196 GGTGGATATCGATTCTATGAACTTTTATACGATAACTTACATGATTTTATTTATATTAAACTAAAACCAATTAATAAAATAAACTCTTCT 10285
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
10286 TATTTACAA 10294
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10414
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
10415 TTAAATAATAGAGAAATAAAAACATTTTATTATATCTTAGCTATATACCCATTAATGACATCTTATAGGACCATTAAAGAAATTCTAGGA 10504
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
10505 GACTATGATATGTTAAATATAAATGATAAATTAACTACATATTTTTATGAAGATAAAATACACGATAAATTGAGAAAAACAATAAGTGAA 10594
31 D - G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
10595 TATGAACGTACT 10606
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10858
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
10859 TGGATAATAAAAATA---TTATATTATACTAATTTAATATTGGTAATATATATATTT---ATAATAATATATTTGTCAAGGAATACATTA 10942
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
10943 TATTTTATAACCGAT------AATATACATATATTCAATTTTGAACTTATTCAAGAA---TTTAGCCAAAAAGAAAAATACGACTTTTTC 11023
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
11024 ATAAAATAT 11032
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11140
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.37
11141 CTAGATATTAATACAATTAAAGTATTGGCAAAAGAATTACTTACAATTGCTATTATAGTAGAAGATCGTTTTATAGAATTAGATGAAAAG 11230
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
11231 CTAATGATTGAAACTATATCAGAATTGATAGAAGAACTCAGACAAGAGGAATTACAAAGAATTATAGATAAAAATCCAATTACTAAAATA 11320
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
11321 TATAACAAA 11329
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11155
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.21
11156 ATTAAAGTA---TTGGCAAAAGAATTA------CTTACAATTGCTATTATAGTAGAAGATCGTTTTATAGAATTAGATGAAAAGCTAATG 11236
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
11237 ------ATTGAAACTATATCAGAATTGATAGAAGAACTCAGACAAGAGGAATTACAAAGAATTATAGATAAAAATCCAATTACTAAAATA 11320
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
11321 TATAACAAA 11329
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11531
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.22
11532 AAAAATTTAAATATGTTAAACATTCTAATT---TTAATTATAGTGTTATTTTTAACAATTAAAATAATATCTTTTATTAAAAATAAAAGG 11618
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
11619 TATCCAAAATTATCTGTG---AATGAATATAAAAAATCTCCTGAATTATTATTAGAATATTTAAATAAATATTAT---GTAACTAACATT 11702
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
11703 TATTATAGT 11711
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11531
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.22
11532 AAAAATTTAAATATGTTAAACATTCTAATT---TTAATTATAGTGTTATTTTTAACAATTAAAATAATATCTTTTATTAAAAATAAAAGG 11618
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
11619 TATCCAAAATTATCTGTG---AATGAATATAAAAAATCTCCTGAATTATTATTAGAATATTTAAATAAATATTAT---GTAACTAACATT 11702
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
11703 TATTATAGT 11711
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11823
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
11824 CTCTCTTCATTTAGTCGATTGTTATTTATGAGCATTTTAATTATAATTGTTATTTATAATTTTTATAAACTTTTGGATATTATTTTTTTT 11913
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
11914 GATGAAATTTTAAAACTATATCTCTATTTTTTTAGGCATAAA---TTT---AATGACAAAATGCGACTTTTTGTA---ATAGCATATTCT 11994
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
11995 ATAAGAAAT 12003
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12222
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.29
12223 CATTTTGATGCCTTTGGCAAATATTTACATATTTTATTATTAAGTATAGTTATTATTTATGAGATAATTCATACTAATATGTATTATACT 12312
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
12313 TATTATATGCTTTTTATTACTTACATAATTAATGTAATATATAAATATTATATTTTTGAGAAAAAAAAAGATTTTATGTTTGATGGCTTG 12402
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
12403 CTTAATAAA 12411
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12300
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.32
12301 ATGTATTATACTTATTATATGCTTTTTATTACTTACATAATTAATGTAATATATAAATATTATATTTTTGAGAAAAAAAAAGATTTTATG 12390
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
12391 TTTGATGGCTTGCTTAAT---AAAAATTTTTATAATGTACAATATTTTATATTTGCTAATAAC---AAAAGTACTTTAAACATG---AAA 12471
31 - D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
12472 ACCAATATAGAT 12483
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12939
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.14
12940 AAATATATACTTCTCAAGAAAAAATTATGTATTTGTTTCATATTTCGAATACTGTTTGT-TTATT-ATTAATATGGATATAAATATGAAA 13027
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
13028 GAAAATTTAACTTATATCATAAGACAAATAGACTTTGAATATTTAATAACT---GATTATATTAAACTTAAA---GATTTA---AAAATT 13108
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
13109 TATGTATAT 13117
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13227
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.24
13228 ATGCGAAATAGTATT---GTAATATTAAGTGTTATCCAAACTGTAGTATCTTTTGTACAAAAGATTAATTTTATCCTTAAAATTAATCAA 13314
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K - N F 29
13315 GTAGAAGGTATTTATCTTACTGTAAAAATTATTTATGAAAAAGGTTTGCTTAATAAGATGACTGAAACACAATTAAAAACATTATTAGAT 13404
30 T D G L - T N I R N V L E Q K K E I T S D N I K K K E D I D 58
13405 ATCATTTGGAAAAAA 13419
59 K T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13293
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.24
13294 TTTATCCTTAAAATTAATCAAGTAGAAGGTATTTATCTTACTGTAAAAATTATTTATGAAAAA---GGTTTGCTTAATAAGATGACTGAA 13380
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
13381 ACACAATTAAAAACATTATTAGATATCATTTGGAA-AAAAATAACAA-GGAAATGATCTTATATCAAAAAATAAAAATCATATGTATCTT 13468
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
13469 TATAAAAAA 13477
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13536
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.40
13537 ATAACCATGTCTAAATTCCAAATA---ATAGCATACGATATAGTAACTAAAATTTATAAAGCTCTTAAGAACACATCAATTACTACCACC 13623
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
13624 GATCCTATTGTGAACACTTTTATTTATAAGAACGAACGTATTAATTTAGATAAAGAAGCATGCGAAAAGGCTTTTAAAATAATAACAACG 13713
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
13714 ATATTACAA 13722
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14153
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
14154 TTTTCAAATGGCTTTGGAATAAAGAAAACAATCCAGATGATTTA-TTAGAACAAACAGGCGCCTTTGCAGTAAGAATAGGTTCTTATCTT 14242
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
14243 ATTGAATATTTGATAAAACATAACATTTTTAAAGAATCGAGTACTGCTGGATCTAATAATCCAAGATCTTTAAGTTTGAATGAAAAATAT 14332
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
14333 GAAGATAGT 14341
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14215
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
14216 TTTGCAGTAAGAATAGGTTCTTATCTTATTGAATATTTGATAAAACATAACATTTTTAAAGAATCGAGTACTGCTGGATCTAATAATCCA 14305
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
14306 AGATCTTTAAGT---TTG---AATGAA---AAATATGAAGATAGTATTACTACATCTAATCTTTTTGTTAAACCA---ATTTTATACCCA 14383
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
14384 GAAATGTCT 14392
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14401
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
14402 GAATCTAAAATCGAGCGCAAAAGTTTTTCATTTAAACTATTAAAGAAACAAGAGCAGGCTAAAATACCAAAATTCACTTATAAAAAAACA 14491
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
14492 TCTAAATTAAATACAATATTAAATACAAATGATGTTAAATATTGTATAAATAAACCTTTTTTTAATTTTTATATAGATTATTTAAAAGAA 14581
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
14582 ATTGAACAA 14590
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14729
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.29
14730 TTATAGGTAATCATAACAAATTATTTGATAATCAC-TTATGCAAAAAACTAATTCTTACAAAAAAACAATATTTATCTAAATATTCAAAA 14818
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
14819 CTAATGGAAAAGGGTTTAGAAAATAAACTCCATAAAAAAACTAGTAGTATTCATACTCTTGATCAATACATTCAACATGATTTGAATAAA 14908
31 D G L T N I R N V L E Q K - K E I T S D N I K K K E D I D K 59
14909 AATGAACAGAGT 14920
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14743
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
14744 AACAAATTATTTGATAATCACTTATGCAAAAAACTAATTCTTACAAAAAAACAATAT------TTATCTAAATATTCAAAACTAATGGAA 14827
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
14828 AAGGGTTTAGAAAAT---AAA---CTCCATAAAAAAACTAGTAGTATTCATACTCTTGATCAATACATTCAACATGATTTGAATAAAAAT 14911
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
14912 GAACAGAGT 14920
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15076
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.25
15077 ATAAGC---GGTGTTGGTCGCATACTAACAGTGTCACATATTTTAAGTTTTCAAACTAACAAGTTTGCAAGACCATTTCTTAATTATTTC 15163
1 M S V G I G Q I L V V L L L V V L L F G K F - - P N L S K N 28
15164 ATAAAAAATAAAATTACTATGGATTTCGAAATATATGATAAAATGAAAGCACTTTTTGCAAATTATCTTTCAGCAGATTCTACATTACAA 15253
29 F T D G L T N I R N V L E Q K K E I T S D N I K K K E D I D 58
15254 AATATGAGCTTTGAT 15268
59 K T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15218
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
15219 TTGCAAATTATCTTTCAGCAGATTCTACATTACAAAATATGAGCTTTGATTTATTTGAAAAACAAACTAAAGAT-TTACAGGATGAACAT 15307
1 M S V G I G Q I L V V L L - L V V L L F G K F P N L S K N F 29
15308 TTAGCAAGCTTTTTCAATAAAAGTACACCATTAATACAACATAGC---TTAAGTTTTGATTATTTATCTAAAATGATACACATAATTAAA 15394
30 T D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
15395 AATTATGCTAAA 15406
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15440
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
15441 TATATTATAAAGAAAAAAATGCTTTATATAACAATAGTGAA-CTTGTTATATTTTTAGATAGTACAATGAGCGGGTCTCAACATTTAGCA 15529
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
15530 ACAATATTTAAAAAT---AAATTAGCAGCTAAAAATAGTTGTTTAATTTCTACAGATGAAACTAAATTTGACTTAAATATTAATTGCCTT 15616
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
15617 GAAAAATTT 15625
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15751
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
15752 TTTAATTCTGAAATTACTATTTCATGTTTAAAGTCATATTTAAAAAAAATGGCTTTT---AAATATGAAGTGACTCCTTGTGCAATTTCC 15838
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
15839 GATACTTATTCTTTTCCTGATTCTTTTATGCAAGAATGTAAATGTATAATATCAGATAAAGTTTTAATGAAG------ATATCAAAGAAA 15922
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
15923 AAGAAAACT 15931
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16009
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
16010 TTAGAAAATATCATGGATCGGATTATAATTAAACAAAGTACAATGGCAGATCTTTACGGAATGACAATAGGAGGTAGTCGTAAATCTATT 16099
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
16100 TCAAATGCGCTC---ATTGAAAAAATAATTGAAAAAGGAAAATTTGATATAAACCTTTCTTATATTCACATATTTTCTGATATATTATCT 16186
31 D G L T N I R N V L E Q K K - E I T S D N I K K K E D I D K 59
16187 AAATATTATAAA 16198
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16184
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
16185 CTAAATATTATAAATATTTTTATAAAACTAATTATTTACCTTATTGTGATACTTATTTAACATTACGAGAATTTCTA-AAGAAAATGGAA 16273
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
16274 GGTCCTTTAACAATGTCAACAGAATTTTTAACATGGTCATATAATCCAAGAAAAATGAAAATATTACGTATA---AATGTTGTAAAATAT 16360
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
16361 TCAAAAATA 16369
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16306
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
16307 TGGTCATATAATCCAAGAAAA---ATGAAAATATTACGTATAAATGTTGTAAAATATTCAAAAATAACAAATGACCTTAAATCTTTGAAA 16393
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
16394 CGACGTATGATTAACGTA---GCATATTTTACAGGAAAAATTGATCAAACTAAAATATATAACTCAGTTTCTGCTTTTATTATACATACA 16480
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
16481 GAGGAAGCC 16489
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16582
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
16583 GATTGTTTTGGAATTAATTATAGTTTTATTGTCTTTTTGAAAATTCAGTTAAAATTAAATTATAAAACTTGTTATACTCATGAATTATTT 16672
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
16673 CCTTCTCTTTTTAAAATTCTCAATACAACAGATCCTCATTAT---CTCACATTTGCACAGCTTCTC------TTTGATCTTAATAAATCT 16753
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
16754 CCTAACGAT 16762
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 21278
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 26 Length-adjusted: 0.41
21279 AAAAATTTAATTAATACAAATATAATCTATATTTTGCTCATACTAAGATTATTATAAAATAATTCGTATCAATTATGGCTATCATTA--- 21365
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
21366 AATGGCTTAAAAAA-ACTTATAACGTATATTATGGCAAAAAAAACATCGTAGACGACGGGTTAAAGAAATATATATTTAAGACGCGTTTG 21454
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
21455 CTTTTTAAA 21463
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22003
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
22004 CAGGTGTTCGATATCATGTATGCGTTTAAAAAAAGATTTTATGTGGTTAGAAAAATTGATAGATATCAACGTGTAGTAAATATGGTGTGG 22093
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
22094 AAATCCTAATCGTGTCTT---GATATTTTAAATCGTGAGAAAAAAATAAA-GCAATCGCCGTGAAAAGTCAA---GACATTACACAAAAT 22176
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
22177 GATAAAAAA 22185
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22834
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.24
22835 ATAACACGCAGAGTAAATAAGATAATATCCGAACTACTAATACTTTTTCAAAAAAAAAAAGATATAAAAAATCTTTT-AAAAAAGTAAGA 22923
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
22924 AAAAAT---AATAATATAAAAAGTAATAAAAAATTTAAAAAATCTAAACGTCATACTCGTATATCAAAAAAAATAAAAATAAAAAATAAT 23010
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
23011 GAATAAATA 23019
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24680
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
24681 TTATCTTTTGGAATATTGTTTTTACTATCCCTATTGTTTGTGCAGACGATAATTTTGTATATATT-GACGATCGTTCTGTATCATTATAT 24769
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
24770 GATCAGATG---AATGATCCGAATTATAGGCCAGACTGCTATATTGTATGTGCAGATGGTTCATTAAAAAAGGTT---ATAAGAGATCCA 24853
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
24854 GAACATCCT 24862
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 25166
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
25167 CTCAGTATT---ATGAGCAATGTCTCAATTTTGTGGCTACAAAATTACCTGAAACTGTATGGGCAA------AATCTGAGCAGGAACTTT 25247
1 M S V G I G Q I L V V L L L V V L - L F G K F P N L S K N F 29
25248 CT-TCTTCTACTTCTGAAATT---AGTCTTTTACTGGATGCTATTAATTATCAAGTAGAACGAACTCATCCT---GAAGATCTCCATACA 25330
30 T D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
25331 GTACTTGCACTT 25342
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 27598
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
27599 TTTTAGATTTTATATAAAAGAATAACATTACTCTGACTAATAATATATCTTACTTTTAATTATTATAATAAATTATCTATCAACTTCACC 27688
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
27689 AAGACAATATCAAGAGTACC-ATAATGGCAACACATCAGCTAAAGAATGATTTTGAGAAACTCATTAATAG-CAGCTAATGATGAAATCC 27776
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
27777 TGGACACGT 27785
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 29439
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.21
29440 CATGATTTAAATTAGAAAATAATAATATTGTTTTTGTCGAATATATTTTTTTTATTTGGT---TTATCCAAATGTAAGAGTATCTTTAAT 29526
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
29527 AATGGA---AACAATTAAAGA---GTAACAACCCCAAAATTAAAATTAAAACAAATAAATATTATGATGAAG------ATCAATAAACCT 29604
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
29605 TCCATCAAA 29613
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 29651
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
29652 CTAAATCATAATCATTGTAAAATAATTATTATGTTTTTAATTAA-TATTTATTGAAAGTATATTTCCCAAAAAGTATTAT-AAAAATATT 29739
1 M S V G I G Q I L V V L L L V V L L F G K F P - N L S K N F 29
29740 ACAAAAATTTTGCTTAATAAAATAAA-AATAAGTTAAATGAAAAAAAG---ATATGGACTGAATCTATCATTGGGAAGAATTCTTCTTTA 29825
30 T D G L T N - I R N V L E Q K K E I T S D N I K K K E D I D 58
29826 CGTTTTCCTCGA--- 29837
59 K T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34076
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.29
34077 TTTAATGTA---GTAGGGGATGTGTTTATA---TTATTATTAGTCATGTTACTATATGGGGT-TTTAAAAGGATTGCGATTAACATGTTG 34159
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
34160 ATA---ATGTCCATTCTAGAGATTATACTTTAGAGAAGGAAAAAGGTAAACACTTCTTTGTGGATTACTCCCACTTCATCCGTT---TTA 34243
31 D G L T N I R N V L - E Q K K E I T S D N I K K K E D I D K 59
34244 ACTTAGTATGGT 34255
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34343
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
34344 TTATCTCGCGAGGATATAAGAGTCTTTTTAAGCATATCACTTTCTAAGATTACCTGTAAATTGTATATTGCCCCATATAGGTCATCGTCA 34433
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
34434 AATATACATAATTCGGTATTCTGCATACTTGTGAATAATGCT---GTAACATCTGAAAGTATAAAGCCTTATCTATCTTTA---AAGACT 34517
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
34518 CCCTCCTAT 34526
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34552
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
34553 CACTCTTTATTAGTTGGTTGGCATATAAGGGTCTTTTTACCTTTGTTGAAAAGCTTTATTAAGCATTAA---CTTCAATTAAGATACCAT 34639
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
34640 ACAGAACTTAAAAACAAAAAGAATTGGAGTAACCTTCGCTAAAATCAATTATATAATAAAAATAATGAAAAGTATATTAAAATAAT-AAA 34728
31 D G L T N I R N V L E Q K - K E I T S D N I K K K E D I D K 59
34729 AAAGAATATAGA 34740
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 35357
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
35358 TTTTATATAACCATAGTAAATATTATTATTTACGTAAAAAACTATGCCCTTATCTACTATTATTTTGACTATGTTATGACATGTTTGATC 35447
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
35448 ATGACATTTACATGA---AGAAGA---CTCTAACATAAAGCT---ATTGAAAAGAAAAGTTTAACTTCTAAAGAGAATTTAACAGCTTCT 35528
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
35529 AATAAAAGC 35537
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 37935
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
37936 ATAAAAGTTTAAATCTCTAAGTTGAAAAGCAATTTACTAATAATACA-ATACAAAAAATAAAATATATATTTTTCTTTAAGACATATTCA 38024
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
38025 ATTACTCTAGTA---ATAAGACAACTAAACATCCTAAAAAGTAGATAAAATAATATAAATTACTATATAAAATCTAACATGTAAGATAAG 38111
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I - D K 59
38112 TTATCACAAAAG 38123
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 40811
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
40812 ATCTCAAGTCATAAAAGAAGATTAATTTCTTTAGTTATGATAATCATTTTTACATACCCTAGAAAAAGCTATAAACAATTTAAATT-ACA 40900
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
40901 GATTCTTATACG---GTAAA-GGTTTGTTTGAACGTCATGATCTTATAAAATAAAACAACGTAAGAAAGTAAATAAAAATTAATGATGAT 40986
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
40987 ACTTCTTAT 40995
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 41083
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
41084 CTTAATCATCCGTACAAACAAGATTTACATTTAATTTTAAAGAAGAATTTATCCTTCAACTGGTTTAGATATTTGGAAAAAAAT---ACC 41170
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
41171 AAAAGATATGAAAATTCGTTGTGTGTG---GAAAATACTTACGAAATAAAATCTTACAT-ATTGTTATAAATGTATCGTTTATTTCAAAA 41256
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D - I D K 59
41257 TCTTCCTACAAA 41268
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 41308
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.27
41309 AATCCTTATAAAGCTTTGCAGGTAATATTGTTTTTTATATGCATTAGAAGTGCATATAAAAAAAGAGAATTATTAAATAAGAACGTTATG 41398
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
41399 ATGAGTTAAAAGCTTTGAAGAGGCTAGGCTCAGAAAGAAAAAATGAAAAAAGAAGACAAAAACAAAAAAGCCGTAGATCTAGACAAGAAT 41488
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
41489 TTATTAAAC 41497
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42065
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.17
42066 TACTTTATTCGCATAGTAAACTTAGAAGAAAATTTAAAGAAAGATAAAACGTTATTTGGTATAAAAAAAATAAACGTCGAAAAGAAAAAG 42155
1 M S V G I G Q I L V V L L L V V L L F G - K F P N L S K N F 29
42156 ATATTTAAGGAATCATATTTTCGTGATATATTTTTCCAAAAGGACGTCCTTATATAAAAGAATATAAGGTTTAATGCCGATTACCCATAT 42245
30 T D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
42246 ATTATAAGAAGA 42257
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42543
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
42544 GTTATTTGTAGCACAAGCTGCATTCTCTTCGTTGATATTATTTTTCCATCAGGTGTGGGCGTGTTTTTACCGTTTAGTAAGAGCTTAGTT 42633
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
42634 GAAAGACAAATTAC-GTTCGATATTTGATATTCCAAAAAGAAGATCACATGGCTTACTAGAAAGAAAAAGGTTCGCCGTTTATAGAATAT 42722
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
42723 GACTCCAGA 42731
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 43170
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
43171 GTTTCTTCCTTAATATGTATCATTATAAGAAATTTAAACGTTACGTGTTTATTACTAGGTTTCCGACT-AATCTTGAAAAGGAAGAAAAT 43259
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
43260 GGATCTTTATT-AAT---CGGTTCGCCATTAATACGAAGTGGTATAAACGAATTAGACATTTAAAAAGACGATATTTATTAAAAATTATA 43345
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
43346 AGAGCTAAA 43354
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 43700
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
43701 CAAAGAATTTTTTTTCCTATCTTAGGTACTAAATAACTTATTGTTTTGTTTTTAGAAATAACGAGCTTGATTAATTTATCAACAAAATTT 43790
1 M S V G I G Q I L V V - L L L V V L L F G K F P N L S K N F 29
43791 GCACGGAAAAATAAACATCAGCACGATGTTCTAGAAAAAAAGGATTTTCTTTCTAAAGATAGTTTATGAATA------GGAGTGAATAAT 43874
30 T D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
43875 TTTCTTAAAGAT 43886
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45750
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.21
45751 TACAAGATTTCTTGAAATAATAATTTTTGTGTTATTTTGAAATTTTTCCTAACAAGATCGAAA---CCA---TTATG-CAGAATTTTATA 45833
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
45834 TTTGATATGTCTAGCCCACCTTTTAATATGAAAGTGGATGGGCGTTTAATAATCAATGAACTTATCAAAAATGCTAGGCAACTCAAGAAT 45923
31 - D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
45924 CCTGAAAAAAAA 45935
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46065
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
46066 AATATACTATACTAAAAAGAGTCCTTAAACGTTTTGAAAGTATACGTACTCGTTTATCGAAAGTTTTA-AACGGCTCCGAA---TTTTCG 46151
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
46152 GATACCATAGCCAAT------GACACAGGTCATGTTAAGAAATCTATTATGAATTTAATACTTCGCAGCAAAGATCAAAAACCATTTACA 46235
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
46236 TCATTTAAT 46244
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46157
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.21
46158 ATAGCCAATGACACAGGTCATGTTAAGAAATCTATTATGAATTTAATACTTCGC---AGCAAAGATCAAAAACCATTTACATCATTTAAT 46244
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
46245 ATAAATATTCTAACTATAGCAAAACGTATCAAGGATTATGTT---ATTAATGATAATGATATTCTTATGAATACGGATAAAGATAAATTG 46331
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
46332 GCTCAAGCT 46340
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46311
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.35
46312 ATACGGATAAAGATAAATTGGCTCAAGCTATTGAAAGTGCTAAACTTATTGATTTATCT-AAA---CCTAAAAAATCTAAAAATAAAATA 46397
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
46398 GATCCTTCTAAAGCTGTTGTTAATACTACTAGTAAAAAGAAAAATAAAAGGGGTTCCACCCCTGCTAGCATAGCTAAAGCTGTCGCTTCT 46487
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
46488 GATAATAAT 46496
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46610
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 28 Length-adjusted: 0.44
46611 CTGTTCGTAGGAACAAAATATCTTTTAAAAAGCGTACTTATATTTATATTTATTGCTGGCTTATATTATTTTTTTACTAAG---TATACA 46697
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
46698 ---GGAGCAACACCAGCGATTCCAGTAACTCAAATGCCTTCAATACTCAATCCTACTCATATTGCATATATTCAACAATTAGAAGCTTTT 46784
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
46785 CAAGCAGCA 46793
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46748
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
46749 ACTCATATTGCATATATTCAACAATTAGAAGCTTTTCAAGCAGCAACTTATGTTGAAGGGAAATTTTCAGTGTTAGAGGGTATTGAATAT 46838
1 M S V G I G Q I L V V L L L V V L L F G K F P N L - S K N F 29
46839 ATACATAATAATCAACCACGATTAAATAGGGTTGAGGACACCCATAGTTTACAAGGTGAAAATACTTCTTATCATCTTTTTATAGAAGAA 46928
30 T D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
46929 TACAAGTCTTTT 46940
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 47539
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
47540 CATTATAAAAGCAAATGTAAGATCATCAATACAATACTGGAGATCGTTATACTCTTTAATAAGATTATCCAATATGGGGTAGATTTTATT 47629
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
47630 TTAGTATGTCCTGCATTTAGA---ATATTCCGTCTTTCAAATTGAATCTTAATTTTGAATTGTTCACCCACTTTT---GTTTATAAACTG 47713
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
47714 AAGGATAGA 47722
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53612
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.33
53613 TTCATAATTTTAAATCAAGAAATTATTATTTATTCTATATTTCTATCAATTTTATTTTTTTGTATAAAATCTTTTGCT---TCATTGGAT 53699
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
53700 ACAATATTTGAAAATATTCGCTCTAATGAAAAATCCAATTTAAATCTTAATTCTAAAAAC---GAGAAAAATTTTAAT---GATACATTA 53783
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
53784 AATCAACGT 53792
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 55453
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
55454 AAGAGATTAATATTTAAAGCAATAAACTTCATATATATTTATATAATAGTAAAATTAAAAAGATTAAAGGGCATTACT---TCCATAAGC 55540
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
55541 ATACACATTACAAATAAAAGTAACCAAACACATCAACGAAATGCCAATACCAAGCCAAGCTTCAAATCCTAAATGACTTTAGATAATAAA 55630
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
55631 TGATCTTTG 55639
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61513
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.14
61514 TTATCCTTAATGACTGCTCAATTACTAAA-ATGATACAATATAAACTTATGAGAATGGTGAAAACCTGCATATTAAAGTAAATAATTTTA 61602
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S - K N F 29
61603 ACGCTTTATAACAACAAAATCCGGAGAGTACTC---CAAAAAAACACA---AAAAATGAAAACCGATGAAAAAAAAAACCAAAAAATAAA 61686
30 T D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
61687 AAACACAAAAAA 61698
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61789
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
61790 TTAATTACATATTTAAAAATAATACCTATAAAATTTGATAAAATTTCTTTAATTTTTGATAATTTACAAAATATTAATCTTATTAATTAT 61879
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
61880 GATTTTAATAAAAAAAACGAAAATATGATTTTATATCAATATGCTATAATTTTCCCTATGATTTATAAGGGAAATACAAAAAATTTTATT 61969
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
61970 TGTAAAAAA 61978
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61870
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
61871 ATTAATTATGATTTTAATAAAAAAAACGAAAATATGATTTTATATCAATATGCTATA---ATTTTCCCTATGATTTATAAGGGAAATACA 61957
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
61958 AAAAATTTTATTTGTAAAAAAATTACCATAAAAAATTTTATCCGTTTTTATCCAGGTCATGTGAATAAAATTATCAATATTATTAATACT 62047
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
62048 TCTCTAAAA 62056
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62261
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.22
62262 CTAAACGTTCTTTTAACGAAGCTACTTTGCAAGATTTTTTCAAAAATGAATTTAACATTAGAGATACCTTTAATGTT-AATAATGGAGTA 62350
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
62351 TGTGATCAAAGCACTATTTTTTCAGCACTAATGGCTAAATATGTTGTATCTTATTATAATTTGAATTCAAAAGATATTATTGTTAATAGT 62440
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
62441 ACACCATTA 62449
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62573
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 303 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
62574 ATATAAAATGGAATA---AAAATCAGATTTATTTGGTTGATAATACTAGTTTTAATGAACAGG---CT-ATAATAATGTTAAATCATTTG 62656
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
62657 GAAAAA---TCTTTGATT---AATCAATTAACTGTTAATCATTTGATGTCTAGTGAATGTGTTCTTTATACTAAAGATATTTTAGCAATT 62740
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
62741 ATGAAAAAT 62749
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 152
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.14
153 ATGTATATAATAATACTAAAAAAAATAATAATTATATATTTAGAAAAAATA---TTTGGAATTAGAAAAATTCTAATTAAAATAAATAAA 239
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
240 ATAAGTTTAATCAATAAAAAGGAA---TTA---AGTAAAAGATATGTTATCATA---ATATTTCGGAAGAATCAGGTAATATATGGGACA 320
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
321 AGGAGCTAT 329
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 282
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
283 ATACCTATAACAAAAGTAAATATATATAACGTTATGATACATATATTTATCATTTTTTCT---TTAGTTGTTTTT---AAAGCATATTCG 366
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
367 AATAAA---TCTTCCTTAATTAATATATTGGTACG-AGGATATTTATAACATATGTATATAATAATACTAAAAAAAATAATAATTATATA 452
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
453 TTTAGAAAA 461
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 3724
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
3725 TCCTCATTAGTAACTTGATAACTATCAATTTTAATATTAGAATCACTTTTAGTACTAGTAACAAGCCCTACCCTAACATATAAATTTTTC 3814
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
3815 TCGGTTTGGTTTGGAATAATTAATGTATTATGTGATAGGTGAGCTAA-AGCAATAATTCCATTAGGATTAGAATCCATATT---TTTAGC 3900
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
3901 AATAAAAAA 3909
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 6254
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
6255 CTATTTATTTTTTTATTAAGTATTAAAGTTCGCATCATACTTACTCGTTATTAAATAATTATTTTTTTGAATTTGTGTTTT---CTTATT 6341
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
6342 AATCATCTTTCTTTTGTTTTTTTTGTATTTCATCATAAAATG---TTGTTAAAATATAATTCAAAATTAAAGGAAAAATTACTTCAAAAT 6428
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
6429 TCTTATCCG 6437
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 6944
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.22
6945 GTTAATTCTTCCATA---CTTGTTTTTTCAGTAATATTAGTAGTATATATAACACCGTCTGGATTTTTTAATTCAGGAATTGGTTTTACG 7031
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
7032 ------CTTGAAGAAGTATTATCTATTTTAGAGAAATCATTTAAAACAGTAGTAGACGGGGTATGTTGGGTATCATTAGTAATACCAAAA 7115
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
7116 TGCAATGGA 7124
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 8935
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
8936 TTTACTCTATCTGTAAGTAAAACCCATATTATCATAATATTAATTATCTTTTTGTTCTTT---TTCATTATAAAAAATTATAATTA-AT- 9020
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
9021 AAAAATATACATAATTTTAGTGGGACTTTACCTTGTAGAAGATGAGTTTTTATCACTTCAATTATACAT---GATAACATATAAAAATCT 9107
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
9108 TTAAAATTT 9116
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 11175
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
11176 ATTCAAATTTTTGACTATTTAAGAATTCTCCTATT-TTGTTATATATTTTAGTAATTGGATTTTTATCTATAATTCTTTGTAATTCCTCT 11264
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
11265 TGTCTGAGTTCTTCTATCAATTCTGATATAGTTTCAATCATTAGCTTTTCATCTAATTCTATAAAACGATCTTCTACTATAATAGCAATT 11354
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
11355 GTAAGTAAT 11363
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 11401
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
11402 TTAATTGTTAAAAATAACACTATAATTAAAATTAGAATGTTTAACATATTTAAATTTTTAAAAGGGAAAAACATTAATTCTCATTCTAAA 11491
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
11492 CATCGTTTTATGAAGAAAATCAAGTATTTTAATAAGAATATTACGTTATCTTGTGGACCATCAATAGATAACCATTCTATCATTTTTTGT 11581
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
11582 GTGAAGAAG 11590
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 12755
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
12756 GTTACTATACTATATGGTAGATTAAATAAAATTTCGGTTTCCATAAAAATAAATTTTGGT---TGT---AATATTATTAAAAATATAAAT 12839
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
12840 AATGA-ATT---GATATTAAA---ATCCAAGAAATAATATTGAATTTTTTATTAAAGACATATTCTGTAAAATCATCAATTTCAGCTGTA 12922
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
12923 TTAGACAAA 12931
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 14190
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
14191 TATAAAATTGGTTTAACAAAAAGATTAGATGTAGTAATACTATCTTCATATTTTTCATTCAAACTTAAAGATCTTGGATTATTAGATCCA 14280
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
14281 GCAGTACTCGATTCTTTAAAAATGTTATGTTTTATCAAATATTCAATAAGATAAGAACCTATTCTTACTGCAAAGGCGCCTGTTTGTTCT 14370
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
14371 AATAAATCA 14379
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 15606
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
15607 TTTAAATATGACTTTAAACATGAAATAGTAATTTCAGAATTAAATATTTTTTTACAAAGTAAATTAGAAATTTCTGCTAAATTCAATGCA 15696
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K - N F 29
15697 TATAAATCATTACGGTTTATGTCAAAT---TTAGCTAAATACTTAGAAGTTTCGTCAGATAATGCTTTTGTAATAAATAGCTGAAATTTT 15783
30 T D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
15784 TCAAGGCAATTA 15795
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 15793
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
15794 TATAGCATAATCATAAAAAA-CTATTAATAGTTTTTTTAAAAATACA-ATAGTTTTCTTTTTCTTTGATATCTTCATTAAAACTTTATCT 15881
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
15882 GATATTATACATTTACATTCTTGCATAAAAGAATCAGGAAAAGAATAAGTATCGGA-AATTGCACAAGGAGTCACTTCATATTTAAAAGC 15970
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
15971 CATTTTTTT 15979
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 16223
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
16224 TCATACGTC---GTTTCAAAGATTTAAGGTCATTTGTTATTTTTGAATATTTTACAACATTTATACGTAATATTTTCATTT---TTCTTG 16307
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
16308 GATTATATGACCATGTTAAAAATTCTGTTGACATTGTTAAAGGACCTTCCATTT---TCTTTAGAAATTCTCGTAATGTTAAATAAGTAT 16394
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
16395 CACAATAAG 16403
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 18840
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
18841 ATAATTATTAAGGTTGT-TTCACATTAACAATACTTTCAAAAATAATTCAAGAAAAGCATAA-TACCCG---TTGAACCTAAATGTTCTA 18925
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
18926 AAACACCTTATCTATAATTTTATAAGTATATTTAAAGAAAAGTTGCAGATGGTAAGA---AATATAAAAACTATTAAAAGCATCTCAAAG 19012
31 D G L T - N I R N V L E Q K K E I T S D N I K K K E D I D K 59
19013 AATTTTTTACAA 19024
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 20885
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
20886 TATACCATAAGCTTATATCTGATTAAAATCGTAATCTACTAGAAATATATTGGATTT---ATTTAAAGTAATGCAAAAACTTTGGGTCCA 20972
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
20973 CATTTTTATAAAAAGATAGAAAATCAAATGAGAACTAAAAAACTAGTATTAGATACTTCAGCAGCAAATAAACAATTAAATGTGAAAAGC 21062
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
21063 CATCGATCG 21071
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 22347
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.17
22348 TTCACTATCGGTACAGGTAA-ATCATAACGACGTCCTGACTTATAGTTCTACG-TATAAGAAAACAGGTTTTAAATTATACAACTTTGAT 22435
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
22436 ATAAGCATCTATGGGGTTTTTTACATCACAGTATGTAAAGGATATTTATCAACATAGGAAAACCTCTATACCAAGTTTTAATTGTTTAAA 22525
31 D G L T N I R N V L E Q K K E I T S - D N I K K K E D I D K 59
22526 AAGCCAAAGAAA 22537
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 25002
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.21
25003 CATAATACTGAGGATGGCCAAGATAAATTG---TTGCTACA-GTGTTTTTAAAATCCTCAAAA---AAGAATTGCAAAGAGAGATTCACC 25085
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
25086 TGATCTTTTAGATCCAACTCTTCTTCA---GAGTCAGTACTAGAAGAAGATTCAGATGAT---GAAGCAAAAGAAGAAGCTGATGAAGTA 25169
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
25170 GAAGCAGAA 25178
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 26180
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.22
26181 TTATGTTTATCTATGGGAGCAGTTTTGCTGCTTTTGCTGCTTTTTATATTGGTTTTCTATTATTAAATCTTTACTACTTATGAACCACAG 26270
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
26271 AATGGGAATTTGTTTATAATCCTTTGAATTACGAAAAAAAATTCCTTATGTCGTACTGATTTTAGTTATTTGAAACAGCTGGTATTTACA 26360
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
26361 TTTCATTAC 26369
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 28894
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
28895 ATATCAACC---GTCTGGTATTTACTATGGCCAATGTTTGAATTATGTGGAGTTAATCATGCTTTTATGCATTGCAAATCGTATCCTTTA 28981
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
28982 AATGGGATT---AATATAAAAAATTTTTAATGTTTTAACATAAAGAATATTTTTCATAAAAATGTTAAGTCAAGGAAAAGTATATGAAGA 29068
31 D G L T N I R N V - L E Q K K E I T S D N I K K K E D I D K 59
29069 AAAGGTTATAAT 29080
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 29459
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
29460 ATGGCAATGGAATTTTCAAGATCAGCTTCTCCTTTGATGGAAGGTTTATTGATCTTC---ATCATAATATTTATTTGTTTTAATTTTAAT 29546
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
29547 TTTGGGGTTGTTACTCTTTAATTGTTTCCATTATTAAAGATACTCTTACATTTGGATAAACCAAATAAAAAAAATATATTCGACAAAAAC 29636
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
29637 AATATTATT 29645
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 29805
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
29806 TTGAAATTCATCATCATATTCACACTAATATTATTAAATTATCACACGCTTCTTCCGATCTGCATTTTTCATAGTAAGCGCATATTTAAA 29895
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
29896 GAGATTCTATTT---CTTCGCTATTTGCTGAAGAATACTTTTATAGTTGTTATATCTTCTATGGATACTATCGAGGAAAACGTAAAGAAG 29982
31 D G L T N I R N V L E Q K K E I T S D N I K K - K E D I D K 59
29983 AATTCTTCCCAA 29994
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 30145
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
30146 TTGTTTGTTAATATACTTTTTATATTAATAGATATGGTTTTAACCAGGTT-TTATATTTAAAATGTTAA---TTGTTTAATTCGTTTACG 30231
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
30232 ACGACAATTATAGACATA---AT-ATTATTCAAGAGATTCGAGTATTAGCAACTAAGTCGATACAAAATAACTTTCATCAGGGGATTCTT 30317
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
30318 AATAAAGCA 30326
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32180
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
32181 AGCTTCAATGGAATACAACATATGAAGCTGCAATTGCTGCACTCTTTGCCAAAATATGGAAGTTTATTCCGAGCAATATCACTCAATTTA 32270
1 M S V G I G Q I L V V L L L V V L L F G K - F P N L S K N F 29
32271 CAGACCTCCATTATTTTCTTAAATTGCTAGTTATCTTTACACAAGGACCTCATCCT-ACAGATGTATCTTTGAAAAATCCTCTA---TTT 32356
30 T D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
32357 ACTCCCAAACAA 32368
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32444
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.22
32445 CTCTCCAAAGGTATT---CAACCAACAATTTATTGTGAACCGGTAATACAAGCATGGCTATCGTTTCCTTCAGATTTAAGAAAGGCATTC 32531
1 M S V G I G Q I L V V L L L V V L L F G K F P - N L S K N F 29
32532 ATGAATGATGTACAACAAGCTTCTGATCCATCAACGGTAATCCAAGATCCGCTGTATTTAGACTCGATAAAACAATTG---GATATTCAT 32618
30 T D G L T N I R N - V L E Q K K E I T S D N I K K K E D I D 58
32619 CTATCTACATTCTTG 32633
59 K T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32591
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
32592 TTTCCCGTAGGCGCAAAGTATTTAAGTTCCTTTGAACAGAAAACAATATTATTTTTTATTCGCTTA---AATGTAATTCATCACGCGACA 32678
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
32679 ---GGATTGCTTTCAGATACTTCCAAGTTAATATTTAATGAAAATATTACCAAATATCTCTCCAAAGGTATTCAACCAACAATTTATTGT 32765
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
32766 GAACCGGTA 32774
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33292
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
33293 TCAAACATAACATTAAAACCTATTTTAATGAAATAAATCATTTATATCATACATCA-TATCGCAAATTCAAATTAGCACCGGATTTATAC 33381
1 M S V G I G Q I L V V - L L L V V L L F G K F P N L S K N F 29
33382 GTTTCTGCAATAAACAATATAAGTCCAATGTTTTATCAACAGTGC---TTATCAACCCTTAAACAAACCATGATAGATCATTTACGTTTT 33468
30 T D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
33469 ACGCAAAATAAA 33480
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33580
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.22
33581 AATAGTATGACGAAAAATACAACATTGTACTTTAATCGTCTAATT---CTCTTAATAGATTTAGAGCCTATCTTAATGAATGGTTTTCGT 33667
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
33668 TTATCAAAACTTAATATACTGACTCCCATAGCAGAGTATTATAATACTATGTTTTCCAATGCAGTATTAAAGGAAACAGAAAATAAACTC 33757
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
33758 ATCAATAAT 33766
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33994
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.32
33995 TCTAGAATGGACATTATCAACATGTTAATCGCAATCCTTTTAAA-ACCCCA---TATAGTAACATGACTAATAATAATATAAACACATCC 34080
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
34081 CCTACTACATTAAATATAAATCCGCTTAGCAAGAAGCAAAGTCAAAGAACCTCTCCGAAT---AAAAAAAGCTTATCACAACCGAAAAGG 34167
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
34168 TATCAACTA 34176
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 34027
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
34028 TTACCTTTTTCCTTCTCTAAAGTATA-ATCTCTAGAATGGACATTATCAACATGTT-AATCGCAATCCT---TTTAAAACCCCATATAGT 34112
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
34113 AAC---ATGACTAAT---AATAATATAAACACATCCCCTACTACATTAAATATAAATCCGCTTAGCAAGAAGCAAAGTCAAAGAACCTCT 34196
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
34197 CCGAATAAA 34205
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 34339
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.10
34340 GAGTCTTTAAAGATAGATAAGGCTTTATACTTTCAGATGTTACAG---CA-TTATTCACAAGTATGCAGAATACCGAATTATGTATATTT 34425
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
34426 GACGAT------GACCTATATGGGGCAATATACAATTTACAGGTAATCTTAGAAAGTGATATGCTTAAAAAGACTCTTATATCCTCGCGA 34509
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
34510 GATAAAGAA 34518
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37701
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.27
37702 TTGGGGTTACAAATAGCTAAGATTTTGCTGCTAATAATTCTTTTTATATACTTTATTGGTTCTTTTTTTAT-GTTAA-CGGAATTGTTAT 37789
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
37790 GATAATTATTTAACAGGGACTACTAATATTTTAGT-AATAAAAGGTTATTTATTGAAGATCATATCGAAAAGATATTATTTCTTTTGTTT 37878
31 D G - L T N I R N V L E Q K K E I T S D N I K K K E D I D K 59
37879 TTTATAGGATTA 37890
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 40171
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
40172 GATAATACGGAAATTAGAACGGTTCTTTTAAAAATATTAATGATTTTATTACTGAGTATTGCTATCATATATTTAAAGAAATT-TTAACT 40260
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
40261 CTCGGATAT---AACGTTTCGCTCGTAATTGTGGAGAACATAACT---AAATCCCCAAATATATCCTTATTTCGTAAAAGACGTAAAGTA 40344
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
40345 TTATACATA 40353
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 41079
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
41080 GAAGATTTTGAAATAAACGATACATTTATAACAATATGTAAGATT---TTATTTCGTAAGTATTTTCCACACACAACG---AATTTTCAT 41163
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
41164 AT-CTTTTGGTATTTTTTTCCAAATATCTAAACCAGTTGAAGGATAAATTCTTCTTTAAAATTAAATGTAAATCTTGTTTGTACGGATGA 41252
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
41253 TTAAGTAAA 41261
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44550
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.22
44551 GTACCCATAGACTTTTCACGCATGTTGAATTTATTAAAAGCAATTTACGAGTGATATGGATGTTATCAAGATAAAGCTAAAATATTTATC 44640
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
44641 CTGGGAAATGACTCAGGTAGAAA-AA-CGAGTTACTCGACATCGTTTCTCTGTGCCTAATACAAAAGCGAAGGAGAAT---GATATTATC 44725
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
44726 AAAAAATAT 44734
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44860
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.17
44861 ATTAAGTTACAGATATCTTCTGAATTACGGAAAACCATT---ATTAATTATCTTTTTTGT---GTTAATAATTTAACATTA---ATTAGT 44941
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
44942 ATTGGCTATCCTATTAAACGCGACGCTTTGTACAAAGCGTTTACTATAATACATGATTATATTAATAATATTAGAGCATATGATAGTTTA 45031
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
45032 CCTTCTGAG 45040
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45100
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
45101 ACATCAAGTGGCCTA---CAGATAATAGCGATGTTATTGGTTCAGAATCTTCTGAT----ATTTATCAGATAGCGATAAATTCCTTTATT 45183
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
45184 TATAAAATTGAAATTCAACGTAAATTTTTAGAATCCTTCTTTTTAAAGATTTTAAATAAATCGTTAGTAGAGTTTTTAAATCAAGAGAAA 45273
31 D G L T N I R N V L E Q - K K E I T S D N I K K K E D I D K 59
45274 TCTGAAACTTTG 45285
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45341
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 26 Length-adjusted: 0.41
45342 TATACGTTCGGGATAAAGGAAAATATTACCACTATAGAACAATATATCCTAAGCTTTTGTAAA---GAAAAT---ACA---AATTTAACA 45422
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
45423 TAGTACCCAACAAAT------AATGTATTAAATAAATTATCATGGTTAAAATCA---CATGTAAAAAAAAAAATAAAAATATATTATATG 45503
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
45504 CAAAAATCT 45512
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45417
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
45418 TTGTTTGTTCGAGTATTACAAAA-ACGGTTATATTATTATTCATTCTCATTTC-TTTATGAAC---CCTGTACTTTCTTTTACCTATACG 45502
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
45503 TTCGGGATA---AAG---GAAAATATTACCACTATAGAACAATATATCCTAAGC---TTTTGTAAAGAAAATACAAATTTAAC-ATAGTA 45582
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
45583 CCCAACAAA 45591
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 46288
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
46289 ATGCTAGCAGGGGTGGAACCCCTTTTATTTTTCTTTTTACTAGTAGTATTAACAACAGCT---TTAGAAGGA---TCTATTTTATTTTTA 46372
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
46373 GATTTTTTA---GGTTTAGATAAATCAATAAGTTTAGCACTTTCAATAGCTTGAGCCAATTTATCTTTATCCGTATTCATAAGAATATCA 46459
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
46460 TTATCATTA 46468
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47914
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.08
47915 TCATCTATTCCT---AAAAAAATATTGAGTTTACTAAGAATAAA-TTATCTTTGGTAAAGGAATATTTATCAGCCTTGAAAGATAATAAA 48000
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
48001 GATGAGACAGCATACAAAAGAATAATTCCACAAAATTGGAATGCAAAAACTCGTCAAGATATGATAACGTATTTGGACGTTTATATTTCC 48090
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
48091 GAAGAAGAA 48099
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 48648
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
48649 TTTCATAGTTCCCTCACGTACTTTTTCGCTATCGATTTTTTTATGTGTTTAATATTGAAGTGGTACTCCAATCTAATTACAATCAAAGCC 48738
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
48739 TTCCATATACCTTCT---AGTAATATATTAACAAATTACAAGGTTTTAACTTCTACACACTATTATAATAGTTTTAT-TTGTTAAGAATA 48824
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
48825 TTAAAATAT 48833
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 50389
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
50390 ATAAATCTAAACGTAACAAATCTTTTGTACGCACTCCGTTACATTTGGGAGGCTACCGCCCCAGTC---AAACTAACCACTTTCATTAAA 50476
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
50477 AATTTTTAGACCATAGTAATAAATGTTTCGCAGGAACGCCTAAATATCATGAAAATGAATATTTCGATAACTTGCATAATAAACTTAATA 50566
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
50567 TTACCCCAA 50575
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 53033
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.33
53034 ATTTTACTCTTTATACAGAGTTTACACAAAGTGCTTGCTAAAGTTGTAATT---TTTAATAATGGTCCAGCAGCAGATTCTTCTACCACT 53120
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
53121 ACC---CTGTCGACTTTACTCCAGTCCCTAAATAAAGATCGTGTACAAAGCCAACAGAATGTCAAGCCTTATGAAAACTTTCAATAAGGT 53207
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D - K 59
53208 GGTCTATCGAAA 53219
60 T E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 53665
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
53666 ATGTCATGCGAAGGTAAATTAAGTTTATATATTGGACTTAAAGCTGAATTCAAAAGATAACGTTGATTTAATGTATCATTAAAATTTTTC 53755
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
53756 TCGTTTTTA---GAATTAAGATTTAAATTGGATTTTTCATTAGAGCGAATATTTTCAAATATTGTATCCAATGAAGCAAAAGATTTTATA 53842
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
53843 CAAAAAAAT 53851
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 57375
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.13
57376 GCTACAGCTAAAATAGAGTGGATTATGCTTCTGATTCAAAATTATGCGTTTGGTGTCGT-TGGTATTAAAATTTATTTATTACATCTGAA 57464
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
57465 GATGTTCATACTATTATTTCTTTGAA-TTAAGACTAAAATATGAAAAAATTTCTAATAATACTAAATTTAAACGACACATAAAATCAAAA 57553
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
57554 TATAAAAGG 57562
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 58961
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.16
58962 GCAAAACTTAATATAAAAAGAGTACTGGTGATAATAAAAATACCATTTATTTCCTTTTAAAGGTATAATAAT---TCTTTT---ATTAAA 59045
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
59046 AGTTTTAAACCATCAGCAAGGGTTGCAATATTCCAAACCTATAACATTAGGTCCTCGAC-GTATTTAATCGCGGCCATATTTTACGTTCT 59134
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
59135 AGTAAGGTT 59143
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59243
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.11
59244 CTAAGCAAAGGGTGCTAAAGTATTATAAACCAAGTATTGTTTGA-GCATTACAATATCAACAAAATTAAAGATTGAGCCAAAATACAACT 59332
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
59333 AATAAAATTAATAGGCTTAAACAAGTTCATAAGAAATCATCTGAGATGCTATC-GT-AAAGCACCTAAAAAGCATAGCGAGAATTCAAGC 59420
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
59421 CCATCCACC 59429
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59914
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
59915 TGTTTTGTT---TTAGGTTATATGGTCAAAGTCCTCTTGAAGAACGTTCTTATTTTTAGGACGTTTAACAACCTTATATAC---TTT--- 59995
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
59996 GC-CTATTTCTTTGTATC---ATAATTGTAAGTCAAATTGACCGTTATTTTCTTAAAGCTGTTCAAAAACTCCCTGAT---AATATTGTT 60078
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
60079 TATAATTCT 60087
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59914
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.02
59915 TGTTTTGTT---TTAGGTTATATGGTCAAAGTCCTCTTGAAGAACGTTCTTATTTTTAGGACGTTTAACAACCTTATATAC---TTT--- 59995
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
59996 GC-CTATTTCTTTGTATC---ATAATTGTAAGTCAAATTGACCGTTATTTTCTTAAAGCTGTTCAAAAACTCCCTGAT---AATATTGTT 60078
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
60079 TATAATTCT 60087
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 60542
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.19
60543 ATTATTATGGTGCTCGGA---GTAATTATTTTATTATTAATGATTATTACTTCTTTTTAGGATATGTTTTACTTGGGGACAAATGTCTTA 60629
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
60630 TTGGGCAGCTACGTTATTACTAAT---TTAGCTCTACTGTTCCTTCTTTGGTCAAAAAATTGTAAATTGGCTTGGAGTGGTTTTTCTGTA 60716
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
60717 GATAATCCT 60725
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 61318
Protein: lcl|KC353356.1_cdsid_AGH24317.1 [gene=tatA] [protein=Sec-independent protein translocase component tatA/E] [protein_id=AGH24317.1] [location=63489..63680] @ 0
DNA length: 378 Protein length: 63
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.05
61319 GTTAGTACAGTTATCATTACCATGTGTACTTTCATAATGCTTATCCAAAAAGAATCAAAAAAGCCATCATCAAAGCCAAAAGGCCACAGC 61408
1 M S V G I G Q I L V V L L L V V L L F G K F P N L S K N F T 30
61409 TTCAGTTACAGCAAACCCAAGCATGCATACTTAAATAAGCGTTGTTCTTCTGCCGATTACGGCTTAAACCAAAAACTAAGAACCAAAAAC 61498
31 D G L T N I R N V L E Q K K E I T S D N I K K K E D I D K T 60
61499 AATACCAAC 61507
61 E K K 63
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 25949
Protein: lcl|KC353356.1_cdsid_AGH24318.1 [gene=cox1] [protein=cytochrome c oxidase subunit 1] [protein_id=AGH24318.1] [location=63831..65423] @ 0
DNA length: 3180 Protein length: 530
1 Nt shifts: 40 ||| 2 Nt shifts: 0
Score: 1099 Length-adjusted: 2.07
25950 AGATTTTTATACTTCGCAGATCGTTGGTTATTCTCAACAAT-CATAAATATATG---GTACTTTATATTTATTATTTAGTATGGTGCTGG 26035
1 M V T S F V R R W F F S T N H K D I G A L Y I M F G T F A G 30
26036 TTTAGCTGGATAGCCTTATCTGTTATATG-CGTATGGAGTTAGC-AGTTGTGGTGATTTAATTTTAAA-TTTAATTATCAACTTTATAAT 26122
31 V T A T T I S V V M R L E L G L P G N Q I L Q G N H Q L Y N 60
26123 ACATTGTA-ACTGCTCATGC-CTTATTATGATTTTTTTCTTTGTGATGCT-GCTTTAATTGGTGGGTTTGGAAATTGGTTTGTACT-TTA 26208
61 V L I T A H G L L M L F M V V M P I L L G G F G N F F V P L 90
26209 CTTATAGGTGCTCCTGATATGGCATTTCCTCGTTTAAATAATATAGT-TTATGGTTATTACCTTCCTCTTTAATTTTACTTCTTTTATCT 26297
91 L I G A P D M A F P R L N N I S F W L L P P A L L L L F F S 120
26298 TCTTATGTTGAAAT-GGTGCTGGAACTGGTTGGACTGTTTATCCTCCACTATCTTCTATTACTGGTCATAGCGGACCATCTGTTGATTTA 26386
121 A L V E V G A G T G W T A Y P P L S G I Q S H S G A S I D L 150
26387 GCTATTTTTAGTTG-CATCTAGCTGGTGTTTCTTCTATGTTAGGTGCTATAAT-TTCATTTGTACATTAAA-AATATGCGTTT-AAAGGA 26472
151 A I F S L H L S G A S S V L A S I N F I T T I F N M R A P G 180
26473 TTAACAGGAGAACGTTTATCTTTATT-GTTTGGGCTGTATTAGTAACTGTGATTTTATTATTACTTTCACTGCCTGTTTA-GCAGGTGC- 26559
181 M T M H R M P L F V W S I L V T S F L L V F A L P V L A G G 210
26560 TATACTATGTTATTAACTGATGT-AATTTTAATACATCTTCTCCTGATGCAAC-GGTGGTGGAGATCCTATTTTATATCAACATTTGTCT 26647
211 I T M L L T D R N F N T T F F D P A G G G D P V L F Q H L F 240
26648 TGGTTTTTTGGCCATCCAGAAGT-TC-ATTTTAATTTTACCTGGTTTTGGTAT-GTTTCTAT-TATTATTCAAGCTATGCTAATAA-AGT 26732
241 W F F G H P E V Y I L V I P G F G V V S H V I S A F S R R P 270
26733 ATTTTTGGTTATTTAGGTATGGTGTATGCTATGTTGTCTATTGGTATTTG-GGTTTTATAGTGTGGGCTCATAT-ATGTATACTGTAGGA 26820
271 I F G Y L G M V Y A M S S I G V L G F I V W A H H M Y T V G 300
26821 TTGGATGTGGATACGCGC---TTATTTCACGCTGCTACTATGATATT-GCTGTGCCAACGGT-ATTAAGATTTTTAGTGG-TTAGCAACC 26904
301 M D V D T R A Y F T A A T M V I A I P T G I K I F S W L A T 330
26905 TTATTTGGTTCTTATCTTAAATTACGTACTCCTTTACTATTCATCTTAGGTTTTCTTATTTTGTTTACATTAGGTGGTCTTAGTGGAGTT 26994
331 M W G G S I E L K A P M L F A V G F V F L F T F G G L T G V 360
26995 GTTAG-CT-AATTCTGGTCTTGATAT-GCTTTCCATGATACTAT-TATGTTGTAGCTCATTTTCATTATGTTTA-TCTATGGGAGCAGTT 27079
361 V L S N S G L D I A L H D T Y Y V V A H F H Y V L S M G A M 390
27080 TT-GCTGCTTTTGCTGCTTTTTATAT-TGGTTTTCTATTATTAAATCTTTACTACTTATGAACCACAGAATGGGAATTTGTTTATAATCC 27167
391 F A I Y A A F Y Y W F G K I T G Y Q Y P E T L A K I Q F W T 420
27168 TTTGAATTACGAAAAAAAATTCCTTATGTCGTACTGAT-TTTAGTTATTTGAAACAGCTGGTATTTACATTT---CATTAC------TAC 27247
421 T F I G V N L T F F P M H F L G L S G M P R R I P D Y P D A 450
27248 TTCATTGGTGTTAATCTTACTTCTTCCCTATG-CA-TTATTAGGTCTTGCAGGAATGCACGCCGTATTCCAGATTATCCTGATGCTATTT 27335
451 F S G W N A V S S Y G S L V T T L S I G L W F Y I V Y R T L 480
27336 ACA------TTTTAATTT---AATAGTAGTTATGGTTCTTTTGTTACTTAGTTTCCACTATCATATTCTTTATATTTGGTGTG-TTTTTA 27415
481 T D G V K C G N D P W G L A V G E P G K E H Y A T L E W T L 510
27416 ATTATAATTTATTTATAATGGTTTTCCTTCTAT---ATTTTATATATTAAACCTTTAATCAAA 27475
511 S S P P L - S H T F E E V P Y I K E T T K 530
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12079
Protein: lcl|KC353356.1_cdsid_AGH24319.1 [gene=cox2] [protein=cytochrome c oxidase subunit 2] [protein_id=AGH24319.1] [location=65558..66349] @ 0
DNA length: 1578 Protein length: 263
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.00
12080 ATCATTATATATATGATTGGATTTATAATTATACTTTTGTT-ACAAAATTATCACTAAATTTATTTATATATCAAAACACTTTTATGATA 12168
1 M L L I V I T F I I V V L V V S G T I Q P V L A D Y A E K W 30
12169 CATTTATTTTTTAAATGTAGTAAGAAAATGTTTCGTTTGTTATATATTCATTTACATTTTGATGCCTTTGGCAAATATTTACATATTTTA 12258
31 Q L D F Q D P A T P V M E G I I N L H H D L W - F F L - I - 57
12259 TTATTAAGTATAGTTATTATTTATGAGATAATTCATACTAATATGTATTATACTTATTATATGCTTTTTATT---ACTTACATAATTAAT 12345
58 L I A V F V L W I L L R T L Y F F D R S Q N T V P S K V V H 87
12346 GTAATATATAAATATTATATTTTTGAGAAAAAAAAAGATTTTATGTTTGATGGCTTGCTTAATAAAAATTTTTATAATGTACAATATTTT 12435
88 G T V L E I I W T I A P S F I L L A I A I P S F - A L L Y S 116
12436 ATATTTGCTAATAACAAAAGTACTTTAAACATGAAAACCAATATAGATTATTTATATTTTATGGAAAAATTAAAAGAAGAAACTACTATT 12525
117 M E E S T D P A I T L K A I G H Q W Y W S Y E Y S D Y T T D 146
12526 AAATATATTTTAAAT---GATTTTGAACAAGTACCAGAA---GAGTTAGTCAATAAACAAATAAATCAAATGTACTTACGTTTTAGTATA 12609
147 S E S L A F D S Y M V P E A D L E P G Q L R L L E V D N R I 176
12610 ATACTAATATTA---CTTTTTATGACAATTTTTCTTTATGATGTT---ATTAGATATTCTATAATAATAAAAATACTTAATTACAATATA 12693
177 V L P T H T H L R I L I T S A D V L H S W A V P S L G V K V 206
12694 TATTCTTTTTTTATTCTATTGCCATTAATTTTTATATTATATTCAGCAACTAAAATTTTT------ACTTTGTCTAATACAGCTGAAATT 12777
207 D A C P G R L N Q A S V F I K R E G I F Y G Q C S E I C G V 236
12778 GATGAT---TTTACAGAATATGTCTTTAATAAA---AAATTC---AATATTATTTCTTGGATTTTAATATCAATTCATTAT 12849
237 N H G F M P I V I E A V P L K D Y V S W V S S Q I E M 263
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 28948
Protein: lcl|KC353356.1_cdsid_AGH24319.1 [gene=cox2] [protein=cytochrome c oxidase subunit 2] [protein_id=AGH24319.1] [location=65558..66349] @ 0
DNA length: 1578 Protein length: 263
1 Nt shifts: 25 ||| 2 Nt shifts: 0
Score: 184 Length-adjusted: 0.70
28949 ATACTTTTTGGGAAATATACTTTCAATAA-ATATTAATTAAAAACATAATAATTATTTTACA-ATGATTAT-GATTTAGCACGTAA-TGG 29034
1 M L L I V I T F I I V V L V V S G T I Q P V L A D Y A E K W 30
29035 CAATGGAATTTTCAAGATCA-GCTTCTCCTTTGATGGAAGGTTT-ATTGATCTTCATCATAATATTTATTTGTTTTA-ATTTTAATTTTG 29121
31 Q L D F Q D P A T P V M E G I I N L H H D L W F F L I L I - 59
29122 GGGTTGTTACTCTTTAATTG-TTTCCATTATTAAAGATACTCTTACATTTGGATAAACCAAATAAAAAAAATATATTCGACAAAAACAAT 29210
60 A V F V L - W I - L L R T L Y F F D R - S Q N T V P S K - - 84
29211 ATTATTATTTTCTAATTTAAATCATGGTACATTCTAGAAATAGTTGG-ACATTAATTCCTTCTTTTATCTA-TTTGCCATAGCTATTCCA 29298
85 - V V - - H G T - - V L E I I W T I A P S F I L L A I A I P 109
29299 TA-TTTGCTCTTCTTTATTCTATGGAAGAGAT-TTTGAACCACAAATAACATTAAAGTT-ATGCTAAT-CAATGGTATGG-AGCTTTGAA 29383
110 S F A L L Y S M E E S T D P A I T L K A I G H Q W Y W S Y E 139
29384 TATGGTAATTA----------GGT------CTTGAATGGGATTCTTATATGATAAT-GAACCAGATTTAGTTAAAGGTGAACTCGT-TTA 29455
140 Y S D Y T T D S E S L A F D S Y M V P E A D L E P G Q L R L 169
29456 TTAACTGTGAT-AATCCTTTATTTGTACTGTTGAAACTA---ATGTAGATTACTTATACTTCTAAAGATGTTAT-CATGCTTTTGCTGTC 29540
170 L E V D N R I V L P T H T H L R I L I T S A D V L H S W A V 199
29541 CCTTT-TTAGGTTTAAAAGTGAT-GCTGTTCCTGGCCGTTTAAATCAATA-TCTTGTTATATCAACCGTCT-GGTATTTACTATGGCCAA 29626
200 P S L G V K V D A C P G R L N Q A S V F I K R E G I F Y G Q 229
29627 TGTTT-GAATTATGTGGAGTTAATCATGCTTTTATGCATTGCAAATCGTATCCTTTAAATGGGATTAATATAAAAAATTTTTAATGTTTT 29715
230 C S E I C G V N H G F M P I V I E A V P L K D Y V S W V S S 259
29716 AACATAAAGAAT 29727
260 Q I E M 263
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 298
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 36 Length-adjusted: 0.20
299 TTATTATTTTTTTTAGTATTATT-ATATACATATGTTATAAATATCCTCGTACC---AATATATTAATTAAGGAAGATTTATTCGAATAT 384
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
385 GCTTTAAAAACAACTAAAGAAAAAATGATAAATATATGTATCATAACGTTATATATATTTACTTTTGTTATAGGTATATTTTATCTTAGA 474
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L - I D 59
475 TATATAAATATAACAAAA---AAAGTAGACTTAAAAATTTATTATATAATGCTAAAAAATCTTTTTACTGAATTTACAAAAGAAGAAATT 561
60 N L D L E K N E I N I E I V A D M I I N E C I H L - K K N V 88
562 ATTTTAAATGTGGTAATAATAATAACTTTTATAATAATTTATATTTTTATAATATATAAATTTACTCAATATTTTAAATTACAAGTAATT 651
89 I L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I 118
652 AAAAGACATCTTTACTTAATAGGAATACCATTAAATAATAATTGGTATTCAACCGTTCATCGA---AAGTATTTA---TGGCCTTTAGCA 735
119 F Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V 148
736 AATTCTTTTCTTAAAATAAGTATAAAACATAAA---ATTGAGTTATTGTATAAAAAATA-TTATTTTG-ATAAAAAGCCTCATAAACCAA 820
149 N S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E 178
821 GACCTGATA 829
179 I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 579
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.12
580 ATAATAACTTTTATAATAATTTATATTTTTATAATATATAAATTTACTCAATATTTTAAATTACAAGTAATTAAAAGACATCTTTACTTA 669
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N - N A Y D 29
670 ATAGGAATACCATTAAATAATAATTGGTATTCAACCGTTCATCGAAAGTATTTATGGCCTTTAGCAAATTCTTTTCTTAA-AATAAGTAT 758
30 L S Y P - - A Q Y Y S S I D S S F I R L L F N S F D N N I L 57
759 AA----AACATAAAATTGAGTTATTGTATAAAAAATATTATTTTGATAAAAAGCCTCATA---AACCAAGACCTG---ATAATTTTTTTT 838
58 I D N L D L E K N E I N I E I V A D M I I N E C I H L K K N 87
839 CTTTATCTGAAGAGGCAAAAATTTTATTTTTTAAAAATAATCCTACATTACCTGAATTAC---TTTTTCATAAATACAAGAAA-ATGTCT 924
88 V I L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D 117
925 ATTTTC---ATAGATAATATTTTAACAAAAGGTCATTATTTTATATTAATTATTAGTATT---CTATATGATGTTATAAATAATGATTTT 1008
118 I F Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y 147
1009 ATT------TTGACTACTATATTTCAAATATTACCTTGGATA---TTTTTTTAT---GAACTTTTTCTAAGAATATCTAAATTTGTAGAT 1086
148 V N S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D 177
1087 GACATTTGGATA 1098
178 E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1844
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.07
1845 CCTTTTGAAGAACCTGTTGAGGAGCCT---ATTGAAATAAAAGTAGAATTTTTTAATGCTTATACGGATCTTATGAATATAGAAGATGTA 1931
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
1932 GAT---AGTGTA---ATTTCTCCAAGTTTTGAAGGCTCTCGTATTTATAGTGACGATGCAATTTTTCAGTTACATTTAGATATTACTGAA 2015
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
2016 TTTGTTACACAAAAAATAAGGGTTTCAACAGAAGATATATCTGTAACAATTATACGAAATACAGTCCAT---GAATAT---TTTATAAAA 2099
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
2100 AGT---AATTTAAATAGTAATCTTACA---CCGTCTGATTTGCAAAACACTAATCATTTAATTAATTTATTACTTAAGGAACTAATT--- 2180
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
2181 GTCAATAGTTTTTTTGCCGCTGACAACGAAAGTTTTATAATGAAACAAATTGCAACA---TCCCTAATAGTT---GAAGTTTTAAGTAAT 2264
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
2265 TTAGAAAATGTGGATTCTAACTGTTAT---TATGATAATCCTGATATC---TTAGATGGGATTGTCCAAGATATTGTAACACGTTTTACA 2348
151 L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I T 180
2349 AAA 2351
181 I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2737
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
2738 AACACCAGTAGTAAAGTATGGAATTACCTAAAAAAAAATGTT---GAATTTAAATTCCATAAACCTGAGTCTGATAAT---TATACAGTG 2821
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
2822 CCTATTACAGCCGTTTATGATACAAAACAAGGATCATCCGATATTCAATATAATTTAGAAAAAATAATTAAAGATTTGAAAATA---GCT 2908
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
2909 ATACAG---GAAAAATCT---TTGAATAAAGAACAAGTAAAAAGC---ATTATTGATGAT---ATTCGT---AAAAATTATGTTACTAAA 2983
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
2984 GGGGTTAGTATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAGTCTTATGATTTTCAATATGAACCT---TTAAAACAAATTTGTAAA 3070
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
3071 ATTAAAAAAGATATTATTATAAATAAAGAACAAGAAAAAATTGTT---ATAGATTCTAAATCATCTTATGAAGAAAAATTGAAAAATTTA 3157
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
3158 GAAGAAAAAATGTCAATAGCTCTTAAAAATATAAATAATTTTCTTGAAAAAAATAAAGATTATACTAAAGAATTTCTTGAAGCAAAAGAA 3247
151 L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I T 180
3248 TTA 3250
181 I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2737
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.02
2738 AACACCAGTAGTAAAGTATGGAATTACCTAAAAAAAAATGTT---GAATTTAAATTCCATAAACCTGAGTCTGATAAT---TATACAGTG 2821
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
2822 CCTATTACAGCCGTTTATGATACAAAACAAGGATCATCCGATATTCAATATAATTTAGAAAAAATAATTAAAGATTTGAAAATA---GCT 2908
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
2909 ATACAG---GAAAAATCT---TTGAATAAAGAACAAGTAAAAAGC---ATTATTGATGAT---ATTCGT---AAAAATTATGTTACTAAA 2983
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
2984 GGGGTTAGTATAGAGAATGCTAATGAACTTTTAACTCTTTGGAAGTCTTATGATTTTCAATATGAACCT---TTAAAACAAATTTGTAAA 3070
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
3071 ATTAAAAAAGATATTATTATAAATAAAGAACAAGAAAAAATTGTT---ATAGATTCTAAATCATCTTATGAAGAAAAATTGAAAAATTTA 3157
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
3158 GAAGAAAAAATGTCAATAGCTCTTAAAAATATAAATAATTTTCTTGAAAAAAATAAAGATTATACTAAAGAATTTCTTGAAGCAAAAGAA 3247
151 L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I T 180
3248 TTA 3250
181 I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4013
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.09
4014 ATTTTTATGGCAAAAATACAGATAATAAAAGTATT-GTAGAAGAAATCATATTTACGCAATATGATTTAACAAAAAATATATGGTCCGAA 4102
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
4103 AATTAT---TACCAATATCCTTTTAATGTGGATCAAGAATTTTTACGTCAACTTTCTATTATTTTTTATAGTAATAAATTA---CAAGAA 4186
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
4187 CTTCAACAGGATTATAAAGAACTACAAGATAAATTATATTCA---CTTCTTATTAAAAGTCACGAAGACTATAATAAGGAA---ATAGAT 4270
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
4271 CGCCTTAATGAATTA---AAAACAAATTATTTGAAAGATAGAAAATATAAACAATATTTT---AATTCATTAACAGATGAAGAACAAAAA 4354
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
4355 TTAGTTTCTCATATAAAAATTTTTCAAGATAAGATTAAAGATGATAATATACAAAATGAAAAAAAACAAAAGAAAGAACTTATTAATCAA 4444
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
4445 CTT------TTGGAAAAAAATAAAAAAGGAAAAGATAAAGAAGAAGG-AACAGAAATTTTAACTGCAAAACAAAAAAAGGAGAAATATCT 4527
151 L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I T 180
4528 AAA 4530
181 I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4718
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.11
4719 ATTTATATTTGTTGCATATATATATATAGTATTAAAAATATTCTGAAGGCTTCAGGAGATAACTATCTTAATTTAAAAGATATTATAGAG 4808
1 M F V H I I F C F F I C F I F S Y F F S Y F L - L N N A Y D 29
4809 ATATTGTATGCACCTTTGAAAACTATAGATCATGCTATTAAATATAATAAATATATTAAACCTTATTATTACAAATTTGTGAGTAAA--- 4895
30 L S Y - P A Q Y Y S - S I D - S S F I R L L F N S F D N N I 56
4896 TTTTAT---AACTTTACTGAAACAAAAAAT---ATAAATGATGACCAGATACAAGTATTTGTCTTTTTTATGCAGATA---TTTCCTAGA 4976
57 L I D N L D L E K N E I N I E I V A D M I I N E C I H L K K 86
4977 ATTATCTTAGTTTCTATTTTAATGATAGATACATTTTATTTTAATAAATTAGAAATATTTTATAAATTTGTATTATTGGGCTTATTTCCT 5066
87 N V I L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N 116
5067 TTTATTTTTAGATATTTTAAATATTCTTTAAAAGATGTTTATGAACACTGGATTGTAGAATTGGAAAATAAATATTCGTTAGTAAGAATT 5156
117 D I F Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E 146
5157 TATGAAGTTGGATATAAATTTGATGATTCTCGTAAAAAAAATACAAAAGCTATTTATCATGATGAAGAAAAAACAATACGGGAATATATA 5246
147 Y V N S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I 176
5247 ---GAAATTAAATTT 5258
177 D E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5214
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.07
5215 ATGATGAAGAAAAA-ACAATACGGGAATATATAGAAATTAAATTTAATAATATTATAGATTAT---TTACTTGATGAAGTT---GATTAT 5297
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
5298 GAGTATGAATCAACTCCTTATTGTAAAAGTGAAGTC---TATAATGAATATTGTTTAAATAAATATAAAAATAAAAAAGCTCTTTATACA 5384
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N - N I L I D 59
5385 AGTGAAGATTTAGATATTTTGAGAGCCTTATATTGTGAGCTTATGCCAAAT---ATTATTCATTTAAAAATGTTTTTATCTAGGATAGAA 5471
60 N L D L E - K N E I N I E I V A D M I I N E C I H L K K N V 88
5472 GTTGTATCGGAAGTATCCTTAATGAAAACGTCAAAAATAGTA---ATA---TTTGGGGGGTATTTAGTATGTTGGGCTTATATATTAATT 5555
89 I L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I 118
5556 ATAAGTTATTATAATTATCCTATAGATTTAATTATGAGTAAATATCTTTTATTAAATTTTATGTTATATTTGGTGAAAGAAGAAAATCCA 5645
119 F Y L Y N F - F D V G I S N E L V T N I N S Y A Y I T Q E Y 147
5646 TTTATGGATTTCGATAGCGGTTCACATAAT---AAAAATCTA---TTAACAATAGAAAATATTAAAAAGATATTATGCAAGATTATAAAA 5729
148 V N S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D 177
5730 AATATTATACAA 5741
178 E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5513
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.09
5514 ATATTTGGGGGGTATTTAGTATGTTGGGCTTATATATTAATTATAAGTTATTATAATTATCCTATAGATTTAATTATGAGTAAATATCTT 5603
1 M F V H I I F C F F I C F I F S Y F - F S Y F L L N N A Y D 29
5604 TTATTAAATTTTATGTTATATTTGGTGAAAGAAGAAAATCCATTTATGGATTTCGATAGCGGTTCACATAATAAAAATCTATTAACAATA 5693
30 L S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D 59
5694 GAA---AATATTAAAAAG------ATATTATGCAAGATTATAAAAAAT---ATTATACAAAAATG-GTCAAAAGAATAATAAAAATAATA 5770
60 N L D L E K N E I N I E I V A D M I I N E C I H L K K N V I 89
5771 ATGCAAATGATAATAATAATTTTAATAAATATATGTAAAATTATTACTTTCAAAGTAAAAGCAGATGAAAAAAATCATCAGGAAGTCTTT 5860
90 L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F 119
5861 GAAAATTTTAGAAAAATACTTAAAGAAGGTTTGTTTAATATATTAGAAAAGTTGGATTGTCTTGAAGATTCACAAACAATGAAGGAAATA 5950
120 - Y L Y N F F D V G I S N E L - V T N I N S Y A Y I T Q E Y 147
5951 GTAGAAACATTTATGGAT---AATTTAATGCTGGAAGAATTATATATTAAATACCTTGCAAAAGATGAAAAAGATTATGAAGGTTTTATG 6037
148 V N S L E S V T V T L K N I D C P Y - T N S E F Y I Q N F I 176
6038 AAAGAAATTCAATCA 6052
177 D E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8054
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.12
8055 ACATTATTACGTTTAATAATGTTAATTATAATATGTAGTAGTTATATATATATAATT---TATAGGCTTATTAAA---CCT---AAAGTA 8135
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
8136 CCA---CCT---CAATTTATACTTAATGTTTTGGTATCTATTATAAATACTGTA---AAATCTTTTGACAATTATACGAAACAATTTAAT 8216
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
8217 CTT---ATTTCCAATACCTATATAAAAATATTTACCTATATAGCAAATAAAATTAATTATTATAATGTCATTTTATGGGAAAAAATCTTA 8303
61 L D L E K N E I N I - E I V A D M I I N E C I H L K K N V I 89
8304 CTTATTATAAATACTGTACCGCATATCATTTTACTTTCTGCTCTA---TTCATAGAT---ACTTTT---TAT---TTAGGTAAATTATTT 8381
90 L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F 119
8382 TATTTTTATAAAGTCATTTGGGTTACATTATTCTTTTTCTTAATCCCATTTAGTTTATATTCTTTTGACTATGTTTGTGAACACTATATA 8471
120 Y L Y N F F D V G I S N E L V T - N I N S Y A Y I T Q E Y V 148
8472 AATTATTGGGAAAAAAATTCTGAAAATGTATGGACAACATATAAACCAAATGTCTTACCTCCT---GAATTAGATTTTTGGCATCCTGAT 8558
149 N S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E 178
8559 TATAATGAG 8567
179 I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8360
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 60 Length-adjusted: 0.33
8361 TTTTATTTAGGTAAATTATTTTATTTTTATAAAGTCATTTGGGTTACATTATTCTTT---TTCTTAATCCCATTTAGTTTATATTCTTTT 8447
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
8448 GACTATGTTTGTGAACACTATATAAATTATTGGGAAAAAAATTCTGAAAATGTATGGACAACATATAAACCAAATGTCTTACCTCCTGAA 8537
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
8538 TTAGATTTTTGGCATCCTGATTATAATGAGGATGATGATGATGAATGTATTCCGCCTAATGATATGGAGATCTCTTTTAGAACATTTATT 8627
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
8628 CCTACTTATTTT---GATGAGATATATTACGAGCAAAAAACACCTCATTTTTATTATATTATACGTCCAACAATAGAATGGTATAATAAT 8714
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
8715 TTATTTAAAGAATATAATGTTACCTGGAAATCTTGTGGAGATATAAAA---AACACCATTATCGAAAAGGATCTTAATTTAATAATTAGA 8801
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
8802 TTAAAAAGTATT---ATAACAACACATGAGATAATTACTAAATGGACAAATGTACAACAAAATATAAAAAATATTAGAATTATAATATAT 8888
151 L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I T 180
8889 ATA 8891
181 I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9122
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 51 Length-adjusted: 0.28
9123 GAATATGCAAAATTACAG---AAAATCTTCTTA---TTCAA-AAAAACTACTTTATACAATAT---ACATTCCAAAAATATCAGGAGTTA 9202
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
9203 CTCTACCCGAATATCCTTTA-AAAGATGTTCAAAAAGCTAATTTTATCCAGTTC---TTTAATAGTATAGTTAAAAATGACCCAATATGG 9288
31 S Y P A Q Y Y S S I D - S S F I R L L F N S F - D N N I L I 58
9289 GATAATTTATGTCAAACATATAATAAAGTAAATTCTTCATTTTTTTATCAAAAAATTAAAGATGCTTATATTAACTTAACTTTACAAACA 9378
59 D N L D L E K N E I N I E I V A D M I I N E C I H L K - K N 87
9379 GCTCATTATAAAGAACAAATAGCTATTTATTTATCATTTATCTTAAAATTGATTGAAATGCACCCTCAAATACCTATTAAAGATATGTGC 9468
88 V I L S L Y L L Y H L S F V - Q E I G F Y S Y L - L - N I C 114
9469 TTAAAAGCAGTCAATTATGATGTT---TATTTTGACATAAATGAGCAGGATAGTTTTTATGTTACAATAAAACAGAATCCTTATAGTCCT 9555
115 I N D I F Y L Y N F F D V G I S N E L V T N I N S Y A Y I T 144
9556 ATTGAA---ATT---AGTCTTCAACATGATAATATTTGTTTGCACACTTTCCATTTATTACTTATTGAA---GAAATATTTCTACAAAAC 9636
145 Q E Y V N S L E S V T V T L K N I D C P Y T N S E F Y I Q N 174
9637 TTTCAAGATAATATTGAACCA 9657
175 F I D E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9739
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 39 Length-adjusted: 0.22
9740 ATGTTTAACAAATTATTTTTCATATTACAGATATTAATAAAATTTAAATATTATTTCATGATATTTATTGTTTTAACA---CTAAGTTTA 9826
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
9827 TGTTTTGCAATTATTATACATTATAATTATAATAAAAAT---AAAAAACTACTAATTAATAAAAAACAAGAGCTTTCTAAACTATTAGAT 9913
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N - N I L I D 59
9914 TATTTATATATC---AAAGAT---ATAAAAATGGAAATATTA---GATTTATTTTTATTAAAC---TTA---TTTACAATAGGATTGATT 9988
60 N L D L E K N E I N I E I V A D M I I N E C I H L K K N V I 89
9989 TTTTCCTTAAGAAATCTT---AATATTGGAGCAACCATAAATATTTTCTTATTTCGACCAAGTCTTGTAATA---TTATCGCAAATTATT 10072
90 L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F 119
10073 TCACTTTGTGTATTAATGTATGTTTTTTACATTTATAACTTAGTTATAAAATACAAATTTTACAAA---ATTTATTTA---TTTATGTGC 10156
120 Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N 149
10157 CAATTTGAAACTTTTATAAAAATATGTGACATTTTTACAGGTGGATATCGATTCTATGAACTTTTATACGATAACTTACATGATTTTATT 10246
150 S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I 179
10247 TATATT 10252
180 T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9805
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 55 Length-adjusted: 0.30
9806 ATTGTTTTAACACTAAGTTTATGTTTTGCAATTATTATACATTATAATTATAATAAAAATAAAAAACTACTAATTAATAAAAAACAAGAG 9895
1 M F V H I I F C F F I C F I F S Y F F S - Y F L L N N A Y D 29
9896 CTTTCTAAACTATTAGATTATTTATATATCAAAGATATAAAAATGGAAATATTAGATTTATTTTTATTAAACTTATTTACAATAGGATTG 9985
30 L S Y P A Q Y - Y - S S I D S S F I R L - L F N S F D N N I 56
9986 ATTTTTTCCTTAAGAAATCTTAATATTGGAGCAACCATAAATATTTTCTTATTTCGACCAAGTCTTGTAATATTATCG---CAAATTATT 10072
57 L I D N L D L E - K N E I N I E I V A D M I I N E C I H L K 85
10073 TCACTTTGTGTATTA---ATGTATGTTTTTTACATTTATAACTTAGTTATAAAATACAAATTTTACAAAATTTATTTATTTATGTGCCAA 10159
86 K N V I L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I 115
10160 TTTGAAACTTTTATAAAAATATGTGACATTTTTACAGGTGGATATCGATTCTATGAACTTTTATACGATAACTTACATGATTTTATTTAT 10249
116 N D I F Y - L Y N F F D V G I S - N E L V - T N I N S Y A Y 142
10250 ATTAAACTAAAACCAATTAATAAAATAAACTCT---TCTTAT---TTACAAGTGCTAATGATAATACTATGCAATAAGATCTTGTACATA 10333
143 I T Q E Y V N S L E S V T V T L K N I D C P Y T N S E F Y I 172
10334 TATGCTTATATAAAAAATATCTTCTAT 10360
173 Q N F I D E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10771
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.13
10772 AATTGCATGATAATAACAATACCTTTATTATTAAGTTTTATATTA---TATGAGCATAGTTATCAATATTTAGTGAATTTTAGATATTTA 10858
1 M F V H I I F C F F I C F I F S Y F F S Y - F L L N N A Y D 29
10859 TGGATAATAAAAATATTATATTATACTAATTTAATATTGGTAATATATATATTTATAATAATATATTTGTCAAGGAATACATTATATTTT 10948
30 L S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D 59
10949 ATAACCGAT---AATATACATATATTCAATTTTGAACTTATTCAAGAATTTAGCCAAAAAGAAAAATACGACTTTTTCATAAAATATTTA 11035
60 N L D L E K N E I N I E I V A D M I I N E C I - H L K K N V 88
11036 AATTATACCCTGTATATGGAACGAGAATT-TCATTCTATACGTACATCAACCTTTTTAAATACAAT---AATGTCTG-ATAAAAACTATT 11120
89 I L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I 118
11121 ATGAAAATTTATTATTATCCCTA-GATATTAATACAATTAAAGTATTGGCAAAAGAATTACTTACAATTGCTATTATAGTAGAAGATCGT 11209
119 F Y L Y N F - F D V G I S N E L V T N I N S Y A Y I T Q E Y 147
11210 TTTATAGAATTAGATGAAAAGCTAATGATTGAAACTATATCAGAATTGATAGAAGAACTCAGACAAGAGGAATTACAAAGAATTATAGAT 11299
148 V N S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D 177
11300 AAAAATCCAATT 11311
178 E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10958
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.08
10959 ATATACATATATTCAATTTTGAACTTATTCAA-GAATTTAGCCAAAAAGAAAAATACGACTTTTTCATAAAATATTTAAATTATACCCTG 11047
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
11048 TATATGGAACGAGAATTTCATTCTATACGTACATCAACCTTTTTAAATACAATAATG---TCT---GATAAAAACTATTAT---GAAAAT 11128
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
11129 TTATTATTATCCCTAGATATTAATACAATTAAAGTATTGGCAAAAGAATTACTTACAATTGCTATTATAGTAGAAGATCGTTTTATAGAA 11218
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I - 89
11219 TTAGATGAAAAGCTAATGATTGAAACTATATCAGAATTGATAGAAGAACTCAGACAAGAGGAATTACAAAGAATTATAGATAAAAATCCA 11308
90 L S L Y L L Y H - L S - F V Q E I G F Y S Y L L N I C I N D 117
11309 ATTACTAAAATATATAAC------AAAATAGGAGAATT-CTTAA-ATAGTCAAAAATTTGAATGGATATGATGGGTTTTTTAAAATTGTT 11390
118 I F Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y 147
11391 ATTAACAGATCCTTCTTCACACAAAAAATGATAGAATGGTTATCTATTGATGGTCCACAAGATAACGTAATATTCTTATTAAAATACTTG 11480
148 V N - S - L E S V T V T L K N I D C P Y T N S E F Y I Q N F 175
11481 ATTTTCTTCATAAAACGA 11498
176 I D E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11709
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 35 Length-adjusted: 0.19
11710 GTATTTTTAAAATAATTATATATGTTTTTTAAATTAAGTATTATT---TTTTATTTACGTTATTTATATTTAGGTCAAAATTTTATGTTA 11796
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
11797 ---TATAAGTCAGAAAATAGTATTATATATCTCTCTTCATTTAGTCGATTGTTATTTATGAGCATTTTAATTATAATTGTTATTTATAAT 11883
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
11884 TTTTATAAACTTTTGGATATTATTTTTTTTGATGAAATTTTAAAACTATATCTCTATTTTTTTAGGCAT---AAATTTAATGACAAAATG 11970
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
11971 CGACTTTTTGTAATAGCATAT---TCT---ATAAGAAATATTTGGGGACCTATTTATTTATTTTTTGATAGTATATGTAATTTTACACCG 12054
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
12055 ATTCCTGATGAATATTATTATGAT---GATCATTATATATATGATTGGATTTATAATTATACTTTTGTTACAAAATTATCACTAAATTTA 12141
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
12142 TTTATATATCAAAACACTTTTATGATACATTTATTTTTTAAATGTAGTAAGAAAATGTTTCGTTTGTTA---TATATT---CATTTACAT 12225
151 L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I T 180
12226 TTT 12228
181 I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12013
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 42 Length-adjusted: 0.23
12014 CTATTTATTTATTTTTTGATAGTATATGTAATTTTACACCGATTCCTGAT-GAATAT---TATTATGATGATCATTATATATATGATTGG 12099
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
12100 ATTTATAATTATACTTTTGTTACAAAATTATCACTAAATTTATTT---ATATATCAAAACACTTTTATGATACATTTATTTTTTAAATGT 12186
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
12187 AGTAAGAAAATGTTTCGTTTGTTATATATTCATTTACATTTTGATGCCTTT---GGCAAATATTTACATATTTTATTATTAAGTATAGTT 12273
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
12274 ATTATTTATGAGATAATTCATACTAATATGTATTATACT------TATTATATGCTTTTTATTACTTACATAATTAAT---GTAATATAT 12354
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
12355 AAATATTATATTTTTGAGAAAAAAAAAGATTTTATGTTTGATGGCTTGCTTAATAAAAATTTTTATAATGTACAATATTTTATATTTGCT 12444
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
12445 AATAACAAAAGTACTTTAAACATGAAAACCAATATAGATTATTTATATTTTATGGAAAAATTAAAAGAAGAAACTACTATTAAATATATT 12534
151 L E S V T V T L K - N I D C P Y T N S E F Y I Q N F I D E I 179
12535 TTAAAT 12540
180 T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12967
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 37 Length-adjusted: 0.20
12968 GTATTTGTTTCATATTTCGAATACTGTTTGTTTATTATTAATATGGATATAAATATGAAAGAAAATTTAACTTATATCATAAGACAAATA 13057
1 M F V - H I I F C F F I C F I - F S Y F F S Y F L L N N A Y 28
13058 GACTTTGAATATTTAATAACTGATTATATTAAACTTAAAGATTTAAAAATTTATGTA---TATATGTTTATAGAAAATTATGTCTATTTA 13144
29 D L S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I 58
13145 GA-ACTTTGTATCAATATTTTTATAACAAAATAATAACAGAAGTTGTACAAGAATTTTCTTTATTGCATCAGTTATATTATTTTATGCGA 13233
59 D N L - D L E K N E I N I E I V A D M - I I N E C I H L K K 86
13234 AATAGTATTGTAATATTAAGTGTTATCCAAACTGTAGTATCTTTTGTACAAAAGATTAATTTTATC---CTTAAAATTAATCAAGTAGAA 13320
87 N V I L S L Y L L Y H - L S F V Q E I G F Y S Y L L N I C I 115
13321 GGTATTTATCTTACTGTAAAAATTATTTATGAAAAAGGTTTGCTTAATAAGATGACTGAAACACAATTAAAAACATTATTAGATATCAT- 13409
116 N D I F Y L Y N F F D V G I S N E L V - T N I N S Y A Y I T 144
13410 TTGGAAAAA---AATAACAAGGAAATGATCTTATATCAAAAAATAAAAATCATATGTATCTTTATAAAAAAAAATTACTATAAGATAAAC 13496
145 Q E Y V N S L E S V T V T L K N I D C P Y T N S E F Y I Q N 174
13497 ATAATCAATGATTTTATACCA 13517
175 F I D E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13113
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.13
13114 ATATATGTTTATAGAAAATTATGTCTATTTAGAACT---TTGTATCAATATTTTTATAACAAAATAATAACAGAAGTTGTACAAGAATTT 13200
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
13201 TCTTTATTGCATCAGTTATATTATTTTATGCGAAATAGTATTGTAATATTAAGTGTTATCCAAACTGTAGTATCTTTTGTACAAAAGATT 13290
31 S Y P A Q Y Y S S I D S S F I R L - L F N S F D N N I L I D 59
13291 AATTTTATCCTTAAAATTAATCAAGTAGAAGGTATTTATCTTACTGTAAAAATTATTTATGAAAAAGGTTTGCTTAATAAGATGACTGAA 13380
60 N L D L E K N E I N I E I V A D M I I N E C I H L K K N V I 89
13381 ACACAATTAAAAACATTATTAGATATCATTTGGAAAAAAATAACAAGGAAATGATCTTATATCAAAAA-ATAAAAATCATATGTATCTTT 13469
90 L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F 119
13470 ATAAAAAAAAATTACTATAAGATAAACATAATCAATGATTTTATACC-AGTGTTCTACATAACTG-AAAATAACCATGTCTAAATTCCAA 13557
120 Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N 149
13558 ATAATAGCATACGATATAGTAACT---AAA---ATTTATAAAGCTCTTAAGAACACATCAATTACTACCACCGATCCTATTGTGAACACT 13641
150 S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I 179
13642 TTTATT 13647
180 T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14512
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.06
14513 AATACAAATGATGTTAAATATTGTATAAATAAACCTTTT---TTTAATTTTTATATAGATTATTTAAAAGAAATTGAACAAATACTTTTA 14599
1 M F V H I I F C F F I C F I F S Y F F S Y F - L L N N A Y D 29
14600 TTAAACTAGTATTAACACAGATTCTGAGGAGCAAAATTGATATCAGATTTTATTTATGTAACATATCAT---TTTGACATAAATAATCTT 14686
30 L S - Y P A Q Y - Y S S I D S S F I R L L F N S F D N N I L 57
14687 TTATCTAATTGTAATATAAATCATGTAAAAGATTTTCTAGTATTTATAGGTAATCATAACAAATTATTTGATAATCACTTATGCAAAAAA 14776
58 I D N L D L E K N E I N I E I V A D M I I N E C I H L K K N 87
14777 CTAATTCTTACAAAAAAACAATATTTATCTAAATATTCAAAACTAATGGAAAAGGGTTTAGAAAATAAACTC---CATAAAAAAACTAGT 14863
88 V I L S - L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N 116
14864 AGTATTCATACTCTTGATCAATACATTCAACATGATTTG---AATAAAAATGAACAGAGTACTAAAGACTTAGCTATTTTAGCTAAAGAG 14950
117 D I F Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E 146
14951 ---ATAAATGCTGCTAAA---CTA---CTT---TTA---AATTGCTATTATAAAGTAGTTGCTCAAAAATTTTATAATGCTCATTTTATA 15025
147 Y V N S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I 176
15026 AAAGATGCCATAATT 15040
177 D E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15007
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 39 Length-adjusted: 0.22
15008 TATAATGCTCATTTTATAAAAGATGCCATAATTTATCAACATTTTGAATATTTTTATCTTCCAATAGAAATAAGCGGTGTTGGTCGCATA 15097
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
15098 CTAACAGTGTCACATATTTTAAGTTTTCAAACTAACAAGTTTGCAAGACCATTTCTTAATTATTTCATAAAAAATAAA---ATT---ACT 15181
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
15182 ATGGATTTCGAAATATATGATAAAATGAAAGCACTTTTTGCAAATTATCTTTCAGCAGATTCTACA---TTACAA---AATATGAGCTTT 15265
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
15266 GATTTATTTGAA---AAACAAACTAAAGATTTACAGGATGAACATTTAGCAAGCTTTTTC---AATAAAAGTACACCATTAATACAACAT 15349
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
15350 AGCTTAAGTTTT---GATTAT---TTATCT---AAAATGATACACATAATTAAAAATTATGCTAAAAAACCTGGGGAGATATTAAATATT 15430
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
15431 CTT---AGTATT---TTATATTATAAAGAAAAAAATGCTTTATATAACAATAGTGAACTTGTTATA------TTTTTAGATAGT---ACA 15505
151 L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I T 180
15506 ATG 15508
181 I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15349
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.02
15350 AGCTTAAGTTTTGATTATTTATCTAAAATGATACACATAATTAAAAATTATGCTAAAAAACCTGGGGAGATATTAAATATTCTTAGTATT 15439
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
15440 TTATATTATAAAGAAAAAAATGCTTTATATAACAATAGTGAACTTGTTATATTTTTAGATAGTACAATGAGCGGGTCTCAA---CATTTA 15526
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
15527 GCAACAATATTTAAAAATAAATTAGCAGCTAAAAATAGTTGTTTAATTTCTACAGATGAAACTAAATTTGACTTAAATATTAATTGCCTT 15616
61 L D L E K N E I N I E I V A D M I I N E C - I H L K K N V I 89
15617 GAAAAATTTCAGCTATTTATTACAAAAGCATTATCTGACGAAACTTCTAAGTATTTAGCTAAATTTGACATAAACCGTAATGATTTATAT 15706
90 L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F 119
15707 GCATTG---AATTTAGCAGAA------ATTTCTAATTTACTTTGTAAAAAAATATTTAATTCTGAAATTACTATTTCATGTTTAAAGTCA 15787
120 Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N 149
15788 TATTTAAAAAAAATGGCTTTTAAATATGAAGTGACTCCTTGTGCAATTTCCGATACTTATTCTTTTCCTGATTCTTTTATGCAAGAATGT 15877
150 S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I 179
15878 AAATGT 15883
180 T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16564
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
16565 TATTATACTCAAAATTATGATTGTTTTGGAATTAATTATAGTTTTATTGTCTTTTTGAAAATTCAGTTAAAATTAAAT---TATAAAACT 16651
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
16652 TGTTATACTCATGAATTATTTCCTTCTCTTTTTAAAATTCTCAATACAACAGATCCTCATTATCTCACATTTGCACAGCTTCTCTTTGAT 16741
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
16742 CTTAATAAATCTCCTAACGATGATAATTATTGGGATGGTATCAT-TACAAGTCCTTATTTTGTTAAATTTTAATTATAGAGGTTTTTATA 16830
61 L D L E K N E I N I E I V A D M I I N E C - I H L K K N V I 89
16831 ATAACTTTGTTTTTTCAATTA---TTAATCTGGGTATTTTTGATTCCTTACTATTTCTTTCTCTATTTATACTTCTATAGCTATATTTTG 16917
90 L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F 119
16918 CTACCTAAAGTCCCTTTTAAGAGAGGTATTAAGCGGTGCATTAGTTTTGTTCTCAATAAAAC-TTCCAAATAAAATTCGTTATTATAGAC 17006
120 Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N 149
17007 ATCCTAACACATAGTAAAGGTTCATCTGTTAATCCTAGCAAGCCCTTAAATTCATCTGAAAATCTTTATGATTATCCATATTTTCAATAT 17096
150 S L E S V T V T L K N I D C P Y T N S E - F Y I Q N F I D E 178
17097 CTTATAACG 17105
179 I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17241
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.06
17242 AAATTTAATAAATTAAAA---TGTTTTCATGTTTCCTTAATA---GCA---TTTATAATTCTTTTTATGTTAGGTAGACATCTGGGAAGC 17322
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
17323 AAATTGTCTCGGCTTTGCTATTACAATGTCATTTTATCACTTATAATTGTTTATATTATTTTATTC---ATGTTTTTTTTATGGTCAAAT 17409
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
17410 ATAAGCTTTAATTTAGGTTCTTGGGTTTCTGTAGGTACTTTAGATATTACTACAAAT---TT-ATAATGATCCTTTATCCATTACTTTGG 17495
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
17496 TACATTAATTC-CTTTATTAC------TTTATTAATCTAATTTATTCTTATGATATTTACATGAAGATCCTAATTAGTTAAATTTTTTGC 17578
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
17579 TTATTTAGTTTTTTCTCTTTTTCTATGTTTGTCTTGTTTTTGCTGGTAATT---ACTTAT---TATGTTTTTAGGATGGGAAGCTGTGGA 17662
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
17663 TTAGCTTCTTATTTCTTATTAATTTCTGGATACAAGAAATCAAGCAATCAGTCTGCTATTAAAGCAATTATTTTTAATCGTGAGGTGATG 17752
151 L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I T 180
17753 CAG 17755
181 I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24329
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.06
24330 GTGGAATGTACTATTCTTGTTACCTTTTACGTCATTCCATTTGGTAAGATTAATTTTACG---TTCGCTTTTAT-ACTTTTTTAAAAATT 24415
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
24416 ATGTTTAATATTATTGCTTATTTAAAAAACAAATTTACTTTCCTATCAGATTTA---TCAATTTATCAAATTTCAATT---ATATCATTG 24499
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
24500 GTACAATTTTATCATACACATTATAATTATAAAATTATAATAAGTTATGGTTTT---CTTTTAGTGCACAATAGTTTTCATATTTTCAAA 24586
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
24587 TCGCACCGTTTAGGTTTTATTGTTATCTTCTATTATAAATTATATTTCTTTTTGTGCACTAGACTTGGTAGTTTATTAGTTTATTTTATT 24676
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
24677 ATTATTATCTTTTGGAATATTGTTTTTACTATCCCTATTGTTTGTGCAGACGATAATTTTGTATATATTGACGATCGTTCTGTATCATTA 24766
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
24767 TATGATCAGATGAATGATCCGAATTATAGGCCAGACTGCTATATTGTATGTGCAGATGGTTCATTAAAAAAGGTTATAAGAGATCCAGAA 24856
151 L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I T 180
24857 CAT 24859
181 I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24610
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 26 Length-adjusted: 0.14
24611 ATCTTCTATTATAAATTATAT---TTCTTTTTGTGCACTAGACTTGGTAGTTTATTAGTTTATTTTATTATTATTATCTTTTGGAATATT 24697
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
24698 GTTTTTACTATCCCTATTGTTTGTGCA---GACGATAATTTTGTATATATTGACGATCGTTCTGTATCATTATATGATCAGATGAATGAT 24784
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
24785 CCGAATTAT---AGGCCAGACTGCTATATT---GTATGTGCAGATGGTTCATTAAAAAAGGTTATAAGAGATCCAGAACATCCTTATATG 24868
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
24869 GGTTTATATGCCGTAGAACATGATGGTAAATTAACACCATTGGGCGTCACGATAAAAGTCAAAGAACCAAAACCTTGGTTTAATTTCGGA 24958
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F - 119
24959 TATGCTAATGAATTGGTTGATACTACTTCATCTTCATCTGAATCTTCTGCTTCTACTTCATCAGCTTCTTCTTTTGCTTCATCATCTGAA 25048
120 Y L Y N F F D - V G I S N E L V T N I N S - Y A Y I T Q E Y 147
25049 TCTTCTTCTAGTACTGACTCTGAAGAAGAGTTGGATCTAAAAGATCAGGTGAATCTCTCTTTGCAATTCTTTTTTGAGGATTTTAAAAAC 25138
148 V N S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D 177
25139 ACTGTAGCAACA 25150
178 E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 24981
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.03
24982 TACTTCATCTTCATCTGAATCTTCTGCTTCTACTTCATCAGCTTCTTCTTTTGCTTCATCATCTG-AATCTTCTTCTAGTACTGACTCTG 25070
1 M F V H I - I F C F - F I C F I F S Y F F S Y F L L N N A Y 28
25071 AAGAAGAGTTGGATCTAAAAGATCAGGTGAATCTCTCTTTGCAATTCTTTTTTGAGGATTTTA---AAAACACTGTAGCAACAATTTATC 25157
29 D L S Y P A Q Y Y - S S I D S S F I R L L F N S F D N N I L 57
25158 TTGGCCATCCTCAGTATTATGAGCAAT---GTCTCAATTTTGTGGCTACAAAATTACCTGAAACTGTATGGGCAAAATCTGAGCAGGAAC 25244
58 I D N L D L E K N E I N I E I V A D M I I N E C I H L K K N 87
25245 TTTCTTCTTCTACTTCTGAAATTAGTCTTTTACTGGATGCTATTAATTATCAAGTAGAACGAACTCATCCTGAAGATCTCCATACAGTAC 25334
88 V I L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D 117
25335 TTGCACTT-AAATCCTCAATTATGACTTATAATGTTTGTAAC---CTTCTTAATAAACTAGATGATCCAGAAGTAGTTGAAAAGGTTTTT 25420
118 I F Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y 147
25421 GAACATACTAATTTTGAATTAGCTAAAGATTACTTTTCATCTCAAACTTAAAATAATCTTTCACTATGATACCCTAAAAACTATTTAAAC 25510
148 V N S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D 177
25511 TTCATTTTTGCT 25522
178 E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45341
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 6 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
45342 AGATTTTTGCATATAATATATTT-TTATTTTTTTT-TTTACATGTGATTTTAACCATGATAAT---TTATTTAATACATTATTT---GTT 45423
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
45424 GGGTACTATGTTAAATTTGTATTTTCTTTACAAAAGCTTAGGATA---TA-TTGTTCTATAGTGGTAATATTTTCCTTTATCCCGAACGT 45509
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
45510 ATAGGTAAAAGAAAGTACAGGGTTCATAAAGAAATGAGAATGAATAATAATATAACCGTTTTTGTAAT-ACTCGAACAAACAAAATGCTT 45598
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
45599 GCTGTTGTTGAGCTAAGTACTTTG---TTTCTTTAAAATTAT---ATTTATCAGAAAGATAATAACGTTTCAAAATCGTTAAAGGAATT- 45681
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
45682 ATTTTAAATTTTCTG---ATATCCAGTGTAGGATTAGCAGCTTTTAATTTGGCAAAA---AACTTTGTTTCATTATACAAGATTTCTTGA 45765
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
45766 AATAATAATTTTTGTGTTATTTTGAAA---TTT---TT-CCT---AACAAGATCGAAACCATTATGCAGAATTTTATATTTGATATGTCT 45845
151 L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I T 180
45846 AGC 45848
181 I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46645
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.05
46646 ACTTATATTTATATT---TATTGCTGGCTTATATTATTTTTTTACTAAGTATACAGGAGCAAC---ACCAGCGATTCCAGTAACTCAAAT 46729
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
46730 GCCTTCAATACTCAATCCTACTCATATTGCATATATTCAACAATTAGAAGC---TTTTCAAGC---AGCAACTT-ATGTTGAAGGGAAAT 46812
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
46813 TTTCAGTGTTAGAGGGTA---TTGAATATATACATAATAATCAACCACGA-TTAAATAGG---GTTGAG---GACACCCATAGTTTACAA 46892
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
46893 GGTGAAAATACTTCTTATCATCTT---TTTATAGAAGAATACAAGTCTTTTATTCTTGGCTTAAATCCAGAAAAACAAGGTATTGCTATT 46979
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
46980 AATTATTTACAAACCATTATAACTTATCAACACAGTATGCTTTTAGATACAACACCATCTCCGCATGATATTGAAGTCATATTTGAAAGT 47069
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
47070 TTAACAACCAAACCTTTAACTACACAAACATCTACTATCAAAATAATTATGCTTCCCGTAATTATTGTTTTATTTATTACA---CTAAAT 47156
151 L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I T 180
47157 GTA 47159
181 I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 59512
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 24 Length-adjusted: 0.13
59513 GTGAATATTCTAGTGGTCCTTTGCTTTTTATTTTATTGCAGAATATGTAATTTAATATTTGGTCGT---TTACACAACTATTCTTTTTCT 59599
1 M F V H I I F C F - F I C F I F S Y F F S Y F L L N N A Y D 29
59600 TGGAGGAT-GGTTCCAAGTTTCTTATTTCCTTTTTAAATGGTTTTATTTTATT-TGCTTTAAAATAATGTTTATCCTAGCTTTATTTTGT 59687
30 L S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D 59
59688 TGATTAGAG---CAGCACTCCGAGATATCGTTGGGACCAATTAATGACATTAGCTGGAGAGCCTTTTTACCAATGTTTTGTTAGGGTGTT 59774
60 N L D L E K N E I N I E I V A D M I I N E C I H L K K N V I 89
59775 TTT---TTGTTTATGCTTTTT---TTAATTTTTATACTAATTTTTTACTTTAATAATTATAAATTAAATGAATT-TGTAATATTACTTTG 59857
90 L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F 119
59858 AATATAAAATATGAATTTTATTTAATTTAATAAAAGTTAAATTATTTATTTAGAAAGAGAATTATAAACAATATTATCAGGGAGTTTTTG 59947
120 Y L - Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V 148
59948 AACAGCTTTAAGAAAATAACGGTCAATTTGACTTACAATTATGATACAAAGAAATAGGCAAAGTATATAAGGTTGTTAAACGTCCTAAAA 60037
149 N S L E S V T V T L K - N I D C P Y T N S E F Y I Q N F I D 177
60038 ATAAGAACGTTC 60049
178 E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61699
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.05
61700 ATATTTTTAAATAAAAAATTT---TTTCCAATATTATTT---TTTATAATAATATTAAAAATTTTATTAATACGTGAAATTTTTTATTTT 61783
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
61784 CATGAATTAATTACATATTTAAAAATAATACCTATAAAATTTGATAAAATTTCTTTAATTTTTGATAATTTACAAAATATTAATCTTATT 61873
31 S Y P A Q Y Y S S I D S S F - - I R L L F N S F D N N I L I 58
61874 ---AATTATGATTTTAATAAAAAAAACGAAAATATGATTTTATATCAATATGCTATAATTTTCCCTATGATTTAT---AAGGGAAATACA 61957
59 D N L D L E K N E I N I E I V A D M I I N E C I H L K K N V 88
61958 AAA---AAT---TTTATTTGTAAAAAAATTACCATAAAAAATTTTATCCGTTTTTATCCAGGTCATGTGAATAAAATTATCAATATTATT 62041
89 I L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I 118
62042 AATACTTCTCTAAAAAAAGTATCACCACAAGCACTTATTGAACAA---AATCGAATAGAAGCTAATAAAATGATTATTTATGCATTCTGC 62128
119 F Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V 148
62129 GAACATTTTAAAAATGATAACTTATCT---GATTTATTAGAT---GATCACAAAATTATTAAT---CGTATGCATGATTTTATTCATAAA 62209
149 N S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E 178
62210 CAACCAACT 62218
179 I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62165
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 960 Protein length: 181
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.06
62166 ATGATCACAAAATTATTAATCGTATGCATGATTTTATTCATAAACAACCAACTCTT-AGTTCAAGAGCATTTCAATTAGCATTGGAAGTT 62254
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
62255 TCATATTCTAAACGTTCTTTTAACGAAGCTACTTTGCAAGATTTTTTCAAAAATGAATTTAACATTAGAGATACC---TTTAATGTTAAT 62341
31 S Y P A Q Y Y S S I D - S S F I R L L F N S F D N N I L I D 59
62342 AATGGAGTATGTGATCAAAGCACTATTTTTTCAGCACTAATGGCTAAATATGTTGTATCTTATTATAATTTGAATTCAAAAGATATTATT 62431
60 N L D L E K N E I N I E I V A D M I I N E C I H L K K N V I 89
62432 GTTAATAGTACACCATTATATTTAACAAAAGATATTTCTCCTGAAATAAAGGCCAGCATGGAATTTAATAAAAATTTAACAGGAAATTCG 62521
90 L - S - - L Y L L Y H L S - F V Q - E I G F Y S Y L L N I C 114
62522 TGTCCTGATATTACTTTAAAAGAACATCCTTATGATTTTAAAGATTCAAAGGATATAAAATGGAATAAAAATCAGATTTATTTGGTTGAT 62611
115 I N D I F Y L Y N F F D V G I S N E L V T N I N S Y A Y I T 144
62612 AATACTAGTTTTAATGAA---CAGGCTATA---ATAATGTTAAATCATTTGGAAAAATCTTTGATTAAT---CAATTAACTGTTAATCAT 62692
145 Q E Y V N S L E S V T V T L K N I D C P Y T N S E F Y I Q N 174
62693 TTGATGTCTAGTGAATGTGTT 62713
175 F I D E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 1048
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 5 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.03
1049 ATCTTTAACTACCGAATATTTAGTTGTCGGCATTATTT-TATATAAAGATTTACATATTGAACCAGCTTCATATAAATAACTACTTTTAT 1137
1 M F V H I I F - C F F I C F I F S Y F F S Y F L L N N A Y D 29
1138 ACAGAAAATAATTATGAATA-ATCTTTATTGAAGGCAATGTTTTTAATAAATTATTATC-ATTATCTTTGATAACTTCTACATGCATAT- 1224
30 L S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D 59
1225 AATATGAC----CATAATATTTGTATACCTATT---ATTATTACATAATATATCAGAAAAAATATTATAGGATTATATAATAATTTAAGT 1307
60 N L D L E K N E I N I E I V A D M I I N E C I H L K K N V I 89
1308 AATAGTATAATATATATATATCGTATTTTATTTATTATATTTTTCATTTATTCTATATATTATTTGGATCTTTAACAAAACCTCGTTTTA 1397
90 L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F 119
1398 TATAATGTTCGTTTATAT---CTTGGTAAAAAGACATATCATGTGGTTCATCATCTATCATTAATGTTTCTT---CGTTTATATATTTTA 1481
120 Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N 149
1482 ATTTTTTACTATATATCAAATTATGTAATG---CTTGATCATATGGTATCCAAATGTCATCTACAAATTTAGATATTCTTAGAAAAAGTT 1568
150 S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I 179
1569 CATAAA 1574
180 T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 5336
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 23 Length-adjusted: 0.13
5337 ATTTTCAAAGACTTCCTGATGATTTTTTTCATCTGCTTTTACTTTGAAAGTAATAATTTTACATATATTTATTAAAATTATTATTATCAT 5426
1 M F V H I I F C F F I C F I F - S Y F F S Y F L L N N A Y D 29
5427 TTGCATTATTATTTT---TATTATTCT---TTTGACCAT---TTTTGTATAATATTTTTTATAATCTTGCATAATATCTTTTTAATATTT 5507
30 L S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D 59
5508 TCTATT---GTTAATAGATTTTTATTATGT---GAACCGCTATCGAAATCCATAAATGGATTTTCTTCTTTCACCAAATATAACATAAAA 5591
60 N L D L E K N E I N I E I V A D M I I N E C I H L K K N V I 89
5592 TTTAATAAAAGATATTTACTCATAATTAAATCTATAGG-ATAATTATAATAACTTATAATTA-ATATATAAGCCCAACATACTAAATACC 5679
90 L S - L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I 118
5680 CCCCAAATATT-ACTATTTTTGACGTTTTCATTAAGGATACTTCCGATACAACTTCTATCCTAGATAAAAACATTTTTAAATGAATAATA 5768
119 F Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V 148
5769 TTTGGCATAAGCTCACAATATAAGGCTCTCAAAATATCTAAATC-TTCACTTGTATAAAGAGCTTTTTTATTTTTATATTTATTTAAACA 5857
149 N S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E 178
5858 ATATTCATT 5866
179 I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 5880
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 5 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
5881 CTCGTTATTAAATAATTATTTTT-TTGAATTTGTGTTTTCTTATTAATCATCTTTCTTTTGTTTTTTTTGTATTTCATCATAAAATGTTG 5969
1 M F V H I I F C F F I C F I F S Y F - F S Y F L L N N A Y D 29
5970 TTAAAATATAATTCAAAATT-AAAGGAAAAATTACTTCAAAATTCTTATCCGAACTTTGTTCTTCAAATTCTTTTAAATATTTGTTAGCA 6058
30 L S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D 59
6059 AATAGATATATATATATGCTGTTTAAAAATAATGACGTTATAGGTAAATGAGGT---AACAAAATACTACTAATTACATATATTGCAGTG 6145
60 N L D L E K N E I N I E I V A D M I I N E C I H L K K N V I 89
6146 ATTCGTAAGGTGAATTTATT-CATATT---TTCTTT---GAA------TTTTT-TCATTTCTT---GAAGTCTTAGAAGATAATCCTTTA 6218
90 L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F 119
6219 ATAATGATTGAATTTCTTTCATAAAACCTTCATAAT---CTTTT-TCATCTTTTGCAAGGTATTTAATATATAATTCTTCCAGCATTAAA 6304
120 Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N 149
6305 TTATCCATAAATGTTTCT---ACTATTTCCTTCATTGTTTGTGAA---TCTTCAAGACAATCCAACTTTTCTAATATATTAAACAAACCT 6388
150 S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I 179
6389 TCTTTA 6394
180 T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 10512
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.01
10513 TTTTATGAAAAAGTCGTATTTTTCTTTTTGGCTAAATTCTTGAATAAGTTCAAAATTGAATATATGTATATTATCGGT---TATAAAATA 10599
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
10600 TAATGTATTCCTTGACAAATATATTAT---TATAAATATATATATTACCA-ATATTA---AATTAGTAT---AATATAATATTTTTATTA 10679
31 - S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D 59
10680 TCCATAAATATCTAA---AATTCACTAAATATTGATAACTATGCTCATATAATATAAAACTTAATAATAAAGGTATTGTTATTATCATGC 10766
60 N L D L E K N E I N I E I V A D M I I N E C I H - L K K N V 88
10767 AATTATAGTATG---ACATACTATAACAAAAATTATAATATAATATTAATATTCCTAAAAAGATTAAACGCATACTATATGGCTGATATA 10853
89 I L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I 118
10854 TTCTTTTGAAATCTCTTAATATATATTCTCTTATCTGTTTATCATATTTATAATAAAGAGTCATAC---TTTGTATTAATATTCTA-GTA 10939
119 F Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V 148
10940 CGTTCATAT---TCACTTATTGTTTTTCTC---AATTTATCGTGTATTTTATCTTCATAAAAA---TATGTAGTTAATTTATCATTTATA 11020
149 N S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E 178
11021 TTTAACATA 11029
179 I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 11931
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.04
11932 AAAATATTGTACATTATAAAAATTTTTATTAAGCAAGCCATCAAACATAAAATCTTT---TTTTTTCTCAAAAATATAATATTT---ATA 12015
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
12016 TATTAC---ATTAATTATGTAAGTAAT---AAAAAGCATATAATAAGTATAATACATATTAGTATG---AATTATCTCATAAATAATAAC 12096
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
12097 TATAC-TTAATAATAAAATATGTAAATATT---TGCCAAAGGCATCAAAATGTAAATGAATATATAAC----AAACGAAACATTTTCTTA 12178
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
12179 ---CTACATTTA---AAAAATAAATGTATCATAAAAGTGTTTTGATATATAAATAAATTTAGTGATAATTT-TGTAACAAAAGTATAATT 12261
91 S L Y L L Y H L S F V Q E I - G F Y S Y L L N I C I N D I F 119
12262 ATAAATCCAATCATATATATAATGATCATCATAATAATATTCATCAGGAATCGGTGTAAAATTACATATACTATCAAAAAATAAATAAAT 12351
120 Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N 149
12352 ------AGGTCCCCAAATATTTCTTATAGA---ATA---TGCTATTACAAAAAGTCGCATTTTGTCATTAAATTTATGCCTAAAAAAATA 12429
150 S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I 179
12430 GAGATA 12435
180 T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 13320
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 6 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.09
13321 TTTTTC---TATATTTTG---TGCTTCCATAATTGCATCGTATAT---TACTTTTCTTATTACTTTTTCCC-ATTTTGTTGTGGTTTGTT 13400
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
13401 TT-TTCTTAATTAAATTTTTTTCATCT---TCTTGTAATATCGTTGTTATTATTTTAAAAGCCTTTTCGCATGCTTCTTTA---TCTAAA 13483
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
13484 TTAATACGTTCGTTCTTATAAATAAAAGTGTTCACAATAGGATCGGTGGTAGTAATTGA-TGTGTT---CTTAAGAGCTTTATAAATTTT 13569
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
13570 AGTTACTATATCGTATGCTATTATTTGGAATTTAGACATGG-TTA---TTTTC-AGTTATGTAGAACACTGGTATAAAATCATTGATTAT 13654
91 S L Y L L - Y H L S F V Q E I G F Y S Y L L N - I C I N D I 118
13655 GTTTATCTTATAGTAATTTTTTTTTATAAAGATACATATGATTTTTATTTTTTGATATAAGATCAT---TTCCTTGTTATT---TTTTTC 13738
119 F Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V 148
13739 CAAATGATA---TCTAATAATGTT---TTTAATTGTGTTTCAGT-CATCTTATTAAGCAAACCTTTTTCATAAATAATTTTTACAGTAAG 13821
149 N S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E 178
13822 ATAAATACC 13830
179 I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 23612
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.04
23613 CTTTTTAGTAGGTTTTTTAACTGTTTTGACAACTGTTTTACGTAC---TTTTTTCTGAGTATTTTTCGCTTCATTTTCGCTATTTTTTTA 23699
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
23700 CATTAT---GTTCACTATTATGTAGACTTACCTAATTTCTTTGTAAAAGCAAAGCACCAAGTTTAAAACCTACCATTCTAGAAGTACATA 23786
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
23787 TATTCTTTTAATCTAGCACCAGTATAAACACTATTACTTTCCAACAAAAGGGTTTATATAGTACTAGAT---CGACTTTTTGTTTTATTA 23873
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
23874 CTGGTTTATGTTCTCTTTAATATT---TTCATCAAGAGCTTT---ATAGAAGATTCTTTAATTACTTTGTTAATAACTCATAATTAACAA 23957
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
23958 AGGTAC---TTTCATAACGTAATAATTTTAATTGTCGTTTAGTATAAGTATACTAGGATATGTTTTTTAACTGTTTTACATGTAAAGTAA 24044
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
24045 TAT---ACCTTTTCTATTCATGGGCTGTACACCACCTC-GAGTACGCCACCCATAGGATG---ATCACTGGATTCATAGAAGAAGGACGT 24127
151 L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I T 180
24128 GTT 24130
181 I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32956
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.06
32957 GACTTCAAACATAACATTAAAACCTATTTTAATGAAATAAATCATTTATATCATACATCATATCGCAAATTCAAATTAGCACCGGATTTA 33046
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
33047 ---TAC---GTTTCTGCAATAAACAATATAAGTCCAATGTTTTATCAACAGTGCTTATCAACCCTTAAACAAACC---ATGATAGATCAT 33127
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
33128 TTACGTTTTACGCAAAATAAACCTACGGATCTAACTTATTATTTTTATCTTATCAAACTAATGTTTTTTCCAGAAGAATCAGATAGTTAT 33217
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
33218 AAAGTACCGTTATTTACCTCTGAACAAAAGAAGCAAGTAGAAGGTTATCTTTCTGAGCATATAAACTTATTTGTAATTCAAGATTTTATT 33307
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
33308 CTA---AGTCATTATCAAGTGCCTCCAACAACA---TTTACGGGTAATTTTCAAATATCCAAACTTATTAATAAACCTTTAGACAAGTTT 33391
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
33392 TTTGGATCTACCTTATCAAATAATTCTTATTCACTTCTTATCAATTATTTAACAAGTACAACTAAGATTATC---TTCTTACATGTTGAA 33478
151 L E S - V T V T L K N I D C P Y T N S E F Y I Q N F I D E I 179
33479 ACACTA 33484
180 T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33190
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.01
33191 CTCTTAATAGATTTAGAGCCTATCTTAATGAATGGTTTTCGTTTATCAAAACTTAATATACTGACTCCCATAGCAGAGTATTATAATACT 33280
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
33281 ATGTTTTCCAATGCAGTATTAAAGGAAACAGAAAATAAACTCATCAATAATTTAAAAGACGACTCTTTAATCACATTGTATAATAAATAT 33370
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
33371 TTGATACATTCCCCGGATGAGCGTGCAGAGTATGTCGACATCTATTTACCGTTGAAGGACTTCAAACATAACATTAAAACCTATTTTAAT 33460
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
33461 GAAATAAATCATTTATATCATACATCATAT---CGCAAATTCAAATTAGCACCGGATTTATACGTTTCTGCAATAAACAATATAAGTCCA 33547
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
33548 ATG------TTTTATCAACAGTGCTTATCAACCCTTAAACAAACCATGATAGATCATTTACGTTTT---ACGCAAAATAAACCTACGGAT 33628
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
33629 CTAACTTATTATTTTTATCTTATCAAACTAATGTTTTTTCCAGAAGAATCAGATAGTTATAAAGTACCGTTATTTACCTCTGAACAAAAG 33718
151 L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I T 180
33719 AAG 33721
181 I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37141
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
37142 TGTTTTGTTAGCAGGAATCTTTTAAAATTAGGTTCTTAGGTTTTA---TACGCTTTCTCT---TTTCTTATTCCTAATGCT---TCTTTT 37222
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
37223 TATTTCTACCATTAATATTATAGTTGCTGTGATATCAATTATATTAG-CTC---TTTTACAGTTTACGTCAAAATGATTTA---AAAAGG 37305
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
37306 ATTAT-TGCTACTCATCTATTGCACATATGAATTTTTTAGTGGGCTATTTTTGTAAAAGATTTATTAGTTTAACAGGTTCTTTATTATTG 37394
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
37395 CAAATG---CTCATG---GGTTTC---TTCTTCCGCTTTATT---TTTAGCAATGGAATGTTATATGATGATATAAATCACGTAATATTT 37472
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
37473 CTATTATCGTGGTTTGTTACTGT-TATGCCAATATTTTGTTTCTT---CTT---TTTTATTTTTTCTTTAGCGAATTTAGGGTTTCTTCT 37555
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
37556 ------ACTGTTAATTTTATTCTGAAA---------TGTTAATATTTTTTGGCT---TATTTCAAACAGTCCTTCTATAGCTATTTAACT 37627
151 L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I T 180
37628 TTA 37630
181 I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 37722
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.02
37723 ATGTTCATA---ATTATTCCTTGCAGCTTCTTTTATTATATTTAT---TATTCTATAGGATTATTACAAATACATTGTCTACATCTATTA 37806
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
37807 TATAAATACTA-ATTATTTGTTCTGATGTCCTTTCATCTTTTGTG---ATAACTTAT------CTTACATGTTAGATTTTATATAGTAAT 37886
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
37887 TTATATTATTTTATCTACTTTTTAGGATGTTTAGTTGTCTTATTACTAGA-GTAATTGAATATGTC---TTAAAGAAAAATATATATTTT 37972
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V - I 89
37973 ATTTT-TTGTATTGTATTATTAGTAAATTGCTTTTCAACTTAGAGATTTAAACTTTTATTTATTTTTTGAAGCTT---ATTGATAC-CTG 38057
90 L S L Y - L L Y H L S F V Q E I G F Y S Y L L N I C I N D I 118
38058 TTTTGCTCTTATAGGAATTTGGGGTTACAAATAGCTAAGATTTTGCTGCTAATAATT---CTTTTTATATACTTTATTGGTTCTTTTTTT 38144
119 F Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V 148
38145 ATG---TTAACGGAATTGTTATGATAATTATTTAACAGGGACTACTAATATTTTAGTAATAAAAGGTTATTTATTGAAGATCATATCGAA 38231
149 N S L E S V T V T L K N I D C - P Y T N S E F Y I Q N F I D 177
38232 AAGATATTATTT 38243
178 E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 39994
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 5 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.12
39995 CAATAT---CATATAAAAATTTCAGCTATAGTTTGCCAGATA---ACCTATTTTTTTGGA---TTTTA-TTAGATCAT---TAT---ATA 40068
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
40069 AATTGTCTAAGAGGTTATAATAAGTCCTTTAGTTGTTGACAAATATATAATTTATTTTGTGCAAGATTTGATAAAGTTTATTATTTCGAT 40158
31 S Y P A Q Y Y S S I D S - S F I R L L F N S F D N N I L I D 59
40159 AATACGGAAATT---AGAACG---GTTCTTTTAAAAATATT-AATGATTTTATTACTGAGTATTGCTATCATATATTTAAAGAA---ATT 40238
60 N L D L E K N E I N I E I V A D M I I N E C I H L K K N V I 89
40239 TTAACTCTCGGATATAACGTTTCGCTCGTAATTGTGGAGAACATAACTAAATC-CCCAAATATATCCTTATTTC-GTAAAAGACGTAAAG 40326
90 L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F 119
40327 TATTA-TACATAAATTATTACTGGTATTTCACAGAAAGAATTACCAGTCTTATAGTGGCATTCATGATACTATCATAGCAGAAAAACGGC 40415
120 Y L Y N F F D V G I S N E L V T N I N S Y A Y I T - Q E Y V 148
40416 TGTCATTTACCAGGATGAGTTACGTAATCC---AGAAATATAGGTAAAATAAGCTTTTATTTGGTTCTTGAAATTCTAAATTTTTTGGAA 40502
149 N S L E S - V T V T L K N I D C P Y T N S E F Y I Q N F I D 177
40503 TAAATTAACGTG 40514
178 E I T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 40952
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.01
40953 ATCTACGGCTTTTTTGTTTTTGTCTTCTTTTTTCATTTTTTCTTTCTGAGCCTAGCCTCTTCAAAGCTTTTAACTCATCATAACGTTCTT 41042
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
41043 ATTTAATAATTCTCTTTTTTTATATGCACTTCTAATGCATATAAAAAACAATATTACCTGCAAAGCTTTAT-AAGGATTTAATTATAAAT 41131
31 S Y P A Q Y Y S S I D S S F I R L L F - N S F D N N I L I D 59
41132 GGCATTGCATTAGCT------TTTGTACGTTGTCCTTTGTAGGAAGATTTTGAAATAAACGATACATTTATAACAATATGTAAGATTTTA 41215
60 N L D L E K N E I N I E I V A D M I I N E C I H L K K N V I 89
41216 TTTCGTAAGTATTTTCC-ACACACAACGAATTTTCATATCTTTTGGTATTTTTTTCCAAATATCTAAACCAG---TTGAAGGATAAATTC 41301
90 L S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F 119
41302 TTCTTTAAAATTAAATGTAAATCTTGTTTGTACGGATGATTA---AGTAAA---AAC---TATTTAATCTGTTGCTTTTATTTTACCAAT 41382
120 Y L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N 149
41383 AC-CTAGAATATTTGAAAACTAGCACACAGGATTACGAGGTTGAAGTGATAAATAAGAAGTATCATCA-TTAATTTTTATTTACTTTCTT 41470
150 S L E S V T V T L K N I D C P Y T N S E F Y I Q N F I D E I 179
41471 ACGTTG 41476
180 T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44824
Protein: lcl|KC353356.1_cdsid_AGH24320.1 [gene=orf181] [protein=hypothetical protein] [protein_id=AGH24320.1] [location=66590..67135] @ 0
DNA length: 1086 Protein length: 181
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
44825 TTATATGCAAAAATCTTAATAGAAAGTTTAATAACTAAGAATTTTAAAAATCTGATA---TATGAGAAGGATGCTACATCAAGTGGCCTA 44911
1 M F V H I I F C F F I C F I F S Y F F S Y F L L N N A Y D L 30
44912 CAGATAATAGCGATGTTATT-GGTTCAGAATCTTCTGATATTTATCAGATAGCGATAAATTCCTTTATTTATAAAATTGAAATTCAACGT 45000
31 S Y P A Q Y Y S S I D S S F I R L L F N S F D N N I L I D N 60
45001 AAATTTTTAGAATCCTTCTTTTTAAAGATT---TTAAATAAATCGTTAGTAGAGTTTTTAAATCAAGAGAAATCTGAAACTTTGGGATAT 45087
61 L D L E K N E I N I E I V A D M I I N E C I H L K K N V I L 90
45088 GCTCTTTTTATATTGTGGACAGCACCTACATTCGATATTGTAACATATGAAACAATTAAGTTACAGATATCTTCTGAATTACGGAAAACC 45177
91 S L Y L L Y H L S F V Q E I G F Y S Y L L N I C I N D I F Y 120
45178 ATTATTAATTATCTT---TTTTGTGTTAATAATTTAACATTAATTAGTATTGGC---TATCCTATTAAACGCGACGCTTTGTACAAAGCG 45261
121 L Y N F F D V G I S N E L V T N I N S Y A Y I T Q E Y V N S 150
45262 TTTACTATAATACATGATTATATTAATAATATTAGAGCATATGATAGTTTACCTTCTGAGTTATTTACGCGCAAACTTTTGAAAGGTGCT 45351
151 L E S V T V T L K N I D C - P Y T N S E F Y I Q N F I D E I 179
45352 ACAATG 45357
180 T I 181
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 561
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
562 ATTTTAAATGTGGTAATAATAATAACTTTTATAATAATTTATATTTTTATAATATATAAATTTACTCAATATTTTAAATTACAAGTAATT 651
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
652 AAAAGACATCTTTACTTAATAGGAATACCATTAAATAATAATTGGTATTCAACCGTTCATCGAAAG---TATTTATGGCCTTTAGCAAAT 738
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
739 TCTTTTCTTAAAATAAGTATAAAACATAAAATT 771
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 685
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 21 Length-adjusted: 0.30
686 ATAATAATTGGTATTCAACCGTTCATCGAAAGTATTTATGG-CCTTTAGCAAAT---TCTTTTCTTAAAATAAGTATAAAACATAAAATT 771
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
772 GAGTTATTGTATAAAAAATATTATTTTGAT---AAAAAG---CCTCATAAACCAAGACCTGATAATTTTTTTTCTTTATCTGAAGAGGCA 855
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
856 AAAATTTTATTTTTTAAAAATAATCCTACATTA 888
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1068
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
1069 ATATCTAAATTTGTAGATGACATTTGGATACCATATGATCAAGCATTACATAAT------TTGATATATAGTAAAAAATTAAAATATATA 1152
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
1153 AACGAAGAAACATTAATGATAGATGATGAACCACATGATATGTCTTTTTACCAAGATAT-AAACGAACATTATAT---AAAACGAG-GTT 1237
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
1238 TTGTTA---AAGATCCAAATAATATATAGAATA 1267
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1068
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
1069 ATATCTAAATTTGTAGATGACATTTGGATACCATATGATCAAGCATTACATAAT------TTGATATATAGTAAAAAATTAAAATATATA 1152
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
1153 AACGAAGAAACATTAATGATAGATGATGAACCACATGATATGTCTTTTTACCAAGATAT-AAACGAACATTATAT---AAAACGAG-GTT 1237
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
1238 TTGTTA---AAGATCCAAATAATATATAGAATA 1267
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1436
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.11
1437 TTATTAAAAACATTGCCTTCAATAAAGATTATTCATAATTATTTTCTGTATAAAAGTAGTTATTTATATGAAGCTGGT---TCAATATGT 1523
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
1524 ---AAATCTTTATATAAAATA---ATGCCGACAACTAAATATTCGGTAGTTAAAGATATTATTTTGGTGAAATATAGTTTAGATACTTCA 1607
31 N K K N I K L D I D T H K H P C W N S H K K V - F V L D S S 59
1608 GCTGATTATCAACCTTCTCAAGATGAAGCCTCATAT 1643
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 1562
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
1563 GTAGTTAAAGATATTATTTTGGTGAAATATAGTTTAGATACTTCAGCTGATTATCAACCTTCTCAAGATGAAGCCTCATATTTCCCTTCT 1652
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
1653 GATGATATTAATGATATGATACCAGTACAAATGCAAGATATACCTGTTAAATCCAAAGAGCCTAAAATAGAATATCCTAGAAGACCTAAT 1742
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
1743 ATTGATCTTAAACGTGAAACAATTATCCCTAGA 1775
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2018
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
2019 GTTACACAAAAAATAAGGGTTTCAACAGAAGATATATCTGTAACAATTATACGAAATACAGTCCATGAATATTTTATAAAAAGTAATTTA 2108
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
2109 AATAGTAATCTTACACCGTCTGATTTGCAAAACACTAATCAT---TTAATTAATTTATTACTTAAGGAACTAATTGTCAATAGTTTTTTT 2195
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
2196 GCCGCTGACAACGAAAGTTTTATAATGAAACAA 2228
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2153
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
2154 ATTAATTTATTACTTAAGGAACTAATTGTCAATAGTTTTTTTGCCGCTGACAACGAAAGTTTTATAATGAAACAAATTGCAACATCCCTA 2243
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
2244 ATAGTTGAAGTTTTAAGT---AATTTAGAAAATGTGGATTCTAACTGTTATTATGATAATCCTGATATCTTAGATGGGATTGTCCAAGAT 2330
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
2331 ATTGTAACACGTTTTACAAAACAATGATCTTAT 2363
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2551
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
2552 GCACAAGATGTAATGTATCCCAAAGAAATGTCTAGTATTCCTACTGAAAAAAGTGAAGAACCAATTAAATCTGCAGCAGTTAAAGAAGAA 2641
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
2642 GAAAAAAAAATAATAGAAAAACTTATAGAAGCTGATACT---ATAGCGGAAAAAATACAAGGTAATTCTCATATTTTTAATCCATTAAGA 2728
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
2729 TTAGTTTATAACACCAGTAGTAAAGTATGGAAT 2761
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2692
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
2693 ATACAAGGTAATTCTCATATTTTTAATCCA---TTAAGATTAGTTTATAACACCAGTAGTAAAGTATGGAATTACCTAAAAAAAAATGTT 2779
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
2780 GAATTTAAATTCCATAAACCTGAGTCTGATAATTATACAGTGCCTATTACAGCCGTTTATGATACAAAACAAGGATCATCCGATATTCAA 2869
31 N K K N I K L D I D T H K H P C W N S H - K K V F V L D S S 59
2870 TATAATTTAGAAAAAATAATTAAAGATTTGAAAATA 2905
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 2842
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 36 Length-adjusted: 0.51
2843 ACAAAACAAGGATCATCCGATATTCAATATAATTTAGAAAAAATAATTAAAGATTTGAAA---ATAGCTATACAGGAA---AAATCTTTG 2926
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
2927 AATAAAGAACAAGTAAAAAGCATTATTGATGATATTCGTAAAAAT---TATGTTACT---AAAGGGGTTAGTATAGAGAATGCTAATGAA 3010
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
3011 CTTTTAACTCTTTGGAAGTCT---TATGATTTT 3040
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3070
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.23
3071 ATTAAAAAAGATATTATTATAAATAAAGAACAAGAAAAAATTGTTATAGATTCTAAATCATCTTATGAAGAAAAATTGAAAAATTTAGAA 3160
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
3161 GAAAAAATGTCAATAGCTCTTAAAAATATAAATAATTTTCTTGAAAAAAATAAAGATTATACTAAAGAATTT---CTTGAAGCAAAAGAA 3247
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
3248 TTA---CAAGAATGGTATGATTATTTTCAGAAT 3277
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3403
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.14
3404 CTGAAAAAAAAT---AGTGCTTTACCTATTAATTTACAAAATGAAAAATCAGCTAAATGTTACTTGCCAAAAGATTATGTTATGGAAATA 3490
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
3491 ACAAATATAGAACGTGCTCTTGAAATTTTAAATAAATCACAAACATTATCTATTAATGATCTTAAATTGTTATCCATTAATTCTTCGGCA 3580
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
3581 GTTACTATAGATACAGAAGGTGTTATTAAAATA 3613
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3475
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.11
3476 TATGTTATGGAAATAACAAATATAGAACGTGCTCTTGAAATTTTAAATAAATCACAAACATTATCTATTAATGATCTTAAATTGTTATCC 3565
1 M K K G I H P L K K S L D V I M T N G S F - I K T T V V S S 29
3566 ATTAATTCTTCGGCAGTTACTATAGATACAGAAGGTGTTATTAAAATATCACAAGAGGCGTATCAGTCT---TTTACTAAATATAAAGAT 3652
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
3653 AGCTTAGGATTTAAATATTTATTAGAATATCCAAAA 3688
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3730
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.20
3731 ATTGCTAAAAATATGGATTCTAATCCTAATGGAATT---ATTGCTTTAGCTCACCTATCACAT---AATACATTAATTATTCCAAACCAA 3814
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
3815 ACCGAGAAAAATTTATATGTTAGGGTAGGGCTTGTTACTAGTACTAAAAGTGATTCTAATATTAAAATTGATAGTTATCAAGTTACTAAT 3904
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
3905 GAGGATTCTAATAAACAAAATAAAGATCAAATG 3937
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 3964
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.18
3965 GTAGATGAGAAAATTGAGCCCTTAATAGTAAATCTTGAA------ATGACGTTGTATTTTTATGGCAAAAATACAGATAATAAAAGTATT 4048
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
4049 GTAGAAGAAATCATATTTACGCAATATGATTTAACAAAAAAT---ATATGG---TCC---GAAAATTATTACCAATATCCTTTT---AAT 4126
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
4127 GTGGATCAAGAATTTTTACGTCAACTTTCTATT 4159
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4165
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.07
4166 TATAGTAATAAATTACAAGAACTTCAACAGGATTATAAAGAACTACAAGATAAATTATATTCACTTCTTATTAAAAGTCACGAAGACTAT 4255
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
4256 AATAAGGAAATAGATCGCCTTAAT---GAATTAAAAACAAATTATTTGAAAGATAGAAAATATAAACAATATTTTAATTCATTAACAGAT 4342
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
4343 GAAGAACAAAAATTAGTTTCTCATATAAAAATT 4375
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 4388
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
4389 TTAAAGATGATAATATACAAAATGAAAAAAAACAAAAGAAAGAACTTATTAATC---AACTTTTGGAAAAAAATAAAAAAGGAAAAGATA 4475
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
4476 AAGAAGAAGGAACAGAAATTTTAACTGCAAAACAAAAAAAGGAGAAATATCTAAAGGATAAACAAAATATAAATAATATCGATGAAAAGA 4565
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
4566 ATAATTGATTATTTTTTAATAATATATTATTAT 4598
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5217
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.17
5218 ATGAAGAAAAAACAATACGGGAATATATAGAAATTAAATTTAATAATATTATAGATTATTTACTTGATGAAGTTGATTATGAGTATG--- 5304
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
5305 AATCAACTCCTTATT---GTAAAAGTGAAGTCTAT-AATGAATATTGTTTAAATAAATATAAAAATAAAAAAGCTCTTTATACAAGTGAA 5390
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
5391 GATTTAGATATTTTGAGAGCCTTATATTGTGAG 5423
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5471
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.11
5472 GTTGTATCGGAAGTATCCTTAATGAAAACGTCA---AAAATAGTAATATTTGGGGGGTATTTAGTATGTTGGGCTTATATATTAATTATA 5558
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
5559 AGTTATTATAATTATCCTATAGATTTAATTATGAGTAAATATCTTTTATTAAAT---TTTATG---TTATATTTGGTGAAAGAAGAAAAT 5642
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
5643 CCATTTATGGATTTCGATAGCGGTTCACATAAT 5675
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5725
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 26 Length-adjusted: 0.37
5726 AAAAAATATTATACAAAAATGGTCAAAAGAATAATAAAAATAATAATGCAAATGATAATAATAATTTTAATAAATATATGTAAAATTATT 5815
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
5816 ACTTTCAAA---GTAAAAGCAGATGAAAAAAATCATCAGGAA---GTCTTTGAAAATTTTAGAAAAATACTTAAAGAAGGTTTGTTTAAT 5899
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
5900 ATATTAGAAAAGTTGGATTGTCTTGAAGATTCA 5932
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 5878
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.15
5879 CTTAAAGAAGGTTTGTTTAATATATTAGAAAAGTTGGATTGT---CTTGAAGATTCACAAACAATGAAGGAAATAGTAGAAACATTTATG 5965
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
5966 GATAATTTAATGCTGGAA---GAATTATATATTAAATACCTTGCAAAAGATGAAAAAGATTATGAAGGTTTTATGAAAGAAATTCAATCA 6052
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
6053 TTATTAAAGGATTATCTTCTAAGACTTCAAGAA 6085
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6085
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
6086 ATGAAAAAATTCAAAGAAAATATGAATAAA---TTCACCTTACGAATCACTGCAATATATGTAATTAGTAGTATTTTGTTACCTCATTTA 6172
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
6173 CCTATAACGTCATTATTTTTAAAC---AGCATATATATATATCTATTTGCTAACAAATATTTAAAAGAATTTGAAGAACAAAGTTCGGAT 6259
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
6260 ------AAGAATTTTGAAGTAATTTTTCCTTTA 6286
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6492
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.11
6493 ACTGATAAAAAAATAGGTCATGCTAAAAAATTGCTTGAT------CACCGTTCAATGTCTTTTTCTAAAAGAATTTCGAATCCACAATGT 6576
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
6577 CGTAAATTGCGTCAACAATGTAAACAGCATCATAATAAATATATTACTGATACAAAAATACAAACTAGACATAGAGGTTTAAGCAATAGA 6666
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
6667 GAATTACAAGGTATTCGATCTCCATTGAGTAGT 6699
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6621
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.20
6622 ACTGATACAAAAATACAAACTAGACATAGAGGTTTAAGCAATAGAGAATTACAAGGT------ATTCGATCTCCATTG---AGTAGTAAA 6702
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
6703 AAGTTTAAGGAGGTAAAT---AATATTGATATG---AAAAATCCTTTTCAAAACTCACAAAAAGTGTCAGAACCTTTTTCACCTCTTACA 6786
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S - S 59
6787 AGTATAACTAAAACCTGTAAAACAACATTTAAATCC 6822
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 6918
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
6919 CTTAGTGATCCTACATTTCCAATACCTCCA---TTGCATTTTGGTATTACTAATGATACC---CAACATACCCCGTCTACTACTGTTTTA 7002
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
7003 AATGATTTCTCTAAAATAGATAATACTTCTTCAAGCGTAAAACCAATTCCTGAATTAAAAAATCCAGACGGTGTTATATATACTACTAAT 7092
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
7093 ATTACTGAAAAA---ACAAGTATGGAAGAATTA 7122
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7125
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.18
7126 AAGCAGCAACTTATTGATGAATTAAAAAAACGTAACTTGATAAAAATAACAAAATCTCCTGCAGTTATTATTGAAACAGAAAGTGATGGT 7215
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
7216 CATATACGTATTGGTAATAAAGATAATGATTTAAT-ATTTACGAAACACGGGCGAGCGTATTTAGAATTACAGCC---AAAAAGTCAAAT 7301
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
7302 TTTTATAAATCCTTTAGAAATCACCAAAGAAAA 7334
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7383
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
7384 TATGAGGATGATCTTATAAAAGCCTCGCCACATATG---ATAGCAGCTTATGATCCTACTAATACTCATTTGTACGCATTTTCTACATTT 7470
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
7471 ACAAGCGAAAAAGTTGGTCTAAAAGTAAGTGATGAGCAATTTAAAAAATTTCAAATGAAAAAACAAGGTATAGTATTTACTAAAGAAGAA 7560
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
7561 GAATTAAAACCTCATAATAATAAATCCCAACAA 7593
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7623
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.23
7624 GATAAAAATGAGGCTTATGTAGCCAAGTTTGATCAAGACTATTTTTTTACAATGAGTCTTAATGTAAAAAAGGATTTAGTAGATAATTAT 7713
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
7714 AATAACTTAAAAACTAAACATTATGAGAAATATATGCCACAAACAATATCAAATGAACAATTATTAAATATGTGCAAAGATGTTGACAAA 7803
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
7804 GAAGCTCAAAAAAAAAAACCTAAACACCCTATG 7836
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 7686
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.17
7687 GTAAAAAAGGATTTAGTAGATAATTATAATAACTTAAAAACTAAACATTATGAG---AAATATATGCCACAAACAATA---TCAAATGAA 7770
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
7771 CAATTATTAAATATGTGCAAAGATGTTGACAAAGAAGCTCAAAAAAAAAAACCTAAACACCCTATGACTCTTGAACAACAGCAAAAAAAA 7860
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
7861 GAAGTTGAAAAACAGAAAAATCAATTATTTCAACTA 7896
61 L L Q K F K S K - Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8015
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
8016 ATAAGAAATAGATTA---CCACGAGAAATACCTTTTGATTTAACATTATTACGT---TTAATAATGTTAATTATAATATGTAGTAGTTAT 8099
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
8100 ATATATATAATTTATAGGCTT---ATTAAACCTAAAGTACCACCTCAATTTATACTTAATGTTTTGGTATCTATTATAAATACTGTAAAA 8186
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
8187 TCTTTTGACAATTATACGAAACAATTTAATCTT 8219
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 8771
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 34 Length-adjusted: 0.48
8772 ATCGAAAAGGATCTTAATTTAATAATTAGATTAAAAAGTATTATAACAACACATGAGATAATTACTAAATGGACAAATGTACAACAA--- 8858
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
8859 AATATAAAAAATATTAGAATTATAATATATATAGGATATTTAATATGCTGG---GCTTATATA---TTATACGTA---AGTTTATCAAAT 8939
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
8940 TTT---AAAGATTTTTATATGTTATCATGTATA 8969
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9141
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.17
9142 AAATCTTCTTATTCAAAAAAACTACTTTATACAATATACATTCCAAAAATATCAGGAGTTACTCTACCCGAATATCCTTTAAAAGATGTT 9231
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
9232 CAAAAAGCTAATTTTATCCAGTTCTTTAATAGTATAGTTAAAAATGACCCAATATGGGATAATTTATGTCAAACATATAATAAAGTAAAT 9321
31 N K K N - I K - L D I D T H K H P C W N S H K K V F - V L D 57
9322 TCTTCATTTTTTTATCAAAAAATTAAAGATGCTTAT---ATT 9360
58 S S N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9294
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
9295 TTATGTCAAACATATAATAAAGTAAATTCTTCATTTTTTTATCAAAAAATTAAAGATGCTTATATTAACTTAACTTTACAAACAGCTCAT 9384
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
9385 TATAAAGAACAAATAGCTATTTATTTA---TCATTTATCTTAAAATTGATTGAAATGCACCCTCAAATACCTATTAAAGATATGTGCTTA 9471
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
9472 AAAGCAGTCAATTATGATGTTTATTTTGACATA 9504
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9465
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.07
9466 TGCTTAAAAGCAGTCAAT---TATGATGTTTATTTTGAC---ATAAATGAGCAGGATAGTTTTTAT---GTTACAATAAAACAGAAT--- 9543
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
9544 CCTTATAGTCCTATTGAAATTAGTCTTCAA---CATGATAATATTTGTTTGCACACTTTCCAT---TTATTACTTATTGAAGAAATA--- 9624
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
9625 TTTCTACAAAACTTTCAAGATAATATTGAACCA 9657
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 9877
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.11
9878 ATTAATAAAAAA---CAAGAGCTTTCTAAACTATTAGATTATTTATATATCAAAGATATAAAAATGGAAATATTAGATTTATTTTTATTA 9964
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
9965 AACTTATTTACAATAGG-ATTGATTTTTTCCTTAAGAAATCTTAATATTGGAGCAACCATAAA---TATTTTCTTATT---TCGACCAAG 10047
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
10048 TCTTGTAATATTATCGCAAATTATTTCACTTTG 10080
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 10444
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
10445 TATATCTTAGCTATATACCCATTAATGACATCTTATAGGACCATTAAAGAAATTCTAGGAGACTATGATATGTTAAATATAAATGATAAA 10534
1 M K K G I H P L K K S L D V I M T N - G S F I K T T V V S S 29
10535 TTAACTACATATTTTTATGAAGATAAAATACACGATAAATTGAGAAAAACAATAAGTGAATATGAACGTACTAGAATATTAATACAAAGT 10624
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
10625 ATGACTCTTTAT---TATAAATATGATAAACAGATA 10657
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11032
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.15
11033 TTAAATTATACCCTGTAT---ATGGAACGAGAATTTCATTCTATACGTACATCA---ACCTTTTTAAATACAATAATGTCTGATAAAAAC 11116
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
11117 TATTATGAAAATTTATTATTATCCCTAGATATTAATACAATTAAAGTATTGGCAAAAGAATTACTTACAATTGCTATTATAGTAGAAGAT 11206
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
11207 CGTTTTATAGAATTAGATGAAAAGCTAATGATT 11239
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11516
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
11517 ATGTTTTTCCCTTTTAAAAATTTAAATATGTTAAACATTCTAATTTTAATTATAGTGTTATTTTTAACAATTAAAATAATATCTTTTATT 11606
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
11607 AAAAATAAAAGGTATCCAAAATTATCTGTGAATGAATATAAAAAATCTCCT---GAATTATTATTAGAA---TAT---TTAAATAAATAT 11687
31 - N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
11688 TATGTAACTAACATTTATTATAGTATTTTTAAAATA 11723
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 11823
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.18
11824 CTCTCTTCATTTAGTCGATTGTTATTTATGAGCATTTTAATTATAATTGTTATTTATAATTTTTATAAACTTTTGGATATTATTTTTTTT 11913
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
11914 GATGAAATT---TTAAAACTATATCTCTATTTTTTTAGGCATAAA---TTTAATGACAAAATGCGACTTTTTGTAATAGCATATTCT--- 11994
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
11995 ATAAGAAATATTTGGGGACCTATTTATTTATTT 12027
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12099
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.35
12100 ATTTATAATTATACTTTTGTTACAAAATTATCACTAAATTTATTTATATATCAAAACACTTTTATG---ATACATTTATTTTTTAAATGT 12186
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
12187 AGTAAGAAAATGTTTCGTTTG---TTATATATTCATTTACATTTTGATGCCTTTGGCAAATATTTACATATTTTATTATTAAGTATAGTT 12273
31 N K K N I K L D I D T H K H - P C W N S H K K V F V L D S S 59
12274 ATTATTTATGAGATAATTCATACTAATATGTATTAT 12309
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12288
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.07
12289 ATTCATACTAATATGTATTATACTTATTATATGCTTTTTATTACTTACATAATTAATGTAATATATAAATATTATATTTTTGAGAAA--- 12375
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
12376 ---AAAAAAGATTTTATGTTTGATGGCTTGCTTAATAAAAAT---TTTTATAATGTACAATATTTTATATTTGCTAATAACAAAAGTACT 12459
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
12460 TTAAACATGAAAACCAATATAGATTATTTATAT 12492
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12567
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
12568 GTCAATAAACAAATAAATCAAATGTACTTACGTTTTAGTATAATACTAATATTA---CTTTTTATGACAATTTTTCTTTATGATGTTATT 12654
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
12655 AGATATTCTATAATAATAAAAATACTTAATTACAATATATATTCTTTTTTTATTCTATTGCCATTAATTTTTATATTATATTCAGCAACT 12744
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
12745 AAAATTTTTACTTTGTCTAATACAGCTGAAATT 12777
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 12567
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
12568 GTCAATAAACAAATAAATCAAATGTACTTACGTTTTAGTATAATACTAATATTA---CTTTTTATGACAATTTTTCTTTATGATGTTATT 12654
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
12655 AGATATTCTATAATAATAAAAATACTTAATTACAATATATATTCTTTTTTTATTCTATTGCCATTAATTTTTATATTATATTCAGCAACT 12744
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
12745 AAAATTTTTACTTTGTCTAATACAGCTGAAATT 12777
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13194
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.13
13195 GAATTTTCTTTATTGCATCAGTTATATTATTTTATGCGAAATAGTATTGTAATATTAAGTGTTATCCAAACT---GTAGTATCTTTTGTA 13281
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
13282 CAAAAGATTAATTTTATCCTTAAAATTAAT---CAAGTAGAAGGTATTTATCTTACTGTAAAAATTATTTATGAAAAAGGTTTGCTTAAT 13368
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
13369 AAGATGACTGAAACACAATTAAAAACATTATTA 13401
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13206
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
13207 TTGCATCAGTTATATTATTTTATGCGAAATAGTATT---GTAATATTA---------AGTGTTATCCAAACT---GTAGTATCTTTTGTA 13281
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
13282 CAAAAGATTAATTTTATCCTTAAAATTAAT---CAAGTAGAAGGTATTTATCTTACTGTAAAAATTATTTATGAAAAAGGTTTGCTTAAT 13368
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
13369 AAGATGACTGAAACACAATTAAAAACATTATTA 13401
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13551
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 19 Length-adjusted: 0.27
13552 TTCCAAATAATAGCATACGATATAGTAACTAAAATTTATAAAGCTCTTAAGAACACATCAATTACTACCACCGATCCTATTGTGAACACT 13641
1 M K K G I H P L K K S L D V I M T N G S F I K T - T V V S S 29
13642 TTTATTTATAAGAACGAACGTATTAATTTAGATAAAGAAGCATGCGAAAAGGCTTTTAAAATAATAACAACGATATTACAAGAAGATGAA 13731
30 C N K K N I K L D I D T H K - H P C W N S H K K V F V L D S 58
13732 AAAAATTTAATTAAGAAAAAACAAACCACAACAAAATGG 13770
59 S N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 13758
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.15
13759 ACAACAAAATGGGAAAAAGTAATAAGAAAAGTAATATACGATGCAATTATGGAAGCACAAAATATAGAAAAATCATCAATA---TCGAAT 13845
1 M K K G I H P L K K S L - D V I M T N G S F I K T T V V S S 29
13846 TTCAATGGTAAAGAAATCTTTTTTACATTATTAAAAGAAGATCAT---ATA---AACATGATAAATACAATAATACAAAGAAATATTGCT 13929
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
13930 TATCTTTGATGGAAAGAGTATGGACAACATTTCAAGATA 13968
60 N L - L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14209
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.21
14210 GGCGCCTTTGCAGTAAGAATAGGTTCTTATCTTATTGAATATTTGATAAAACATAACATTTTTAAAGAATCGAGTACTGCTGGATCTAAT 14299
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
14300 AATCCAAGATCTTTAAGTTTGAAT---GAAAAATATGAAGATAGTATTACTACATCTAATCTTTTTGTTAAACCAATTTTATACCCAGAA 14386
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
14387 ATGTCTTATGAATTTGAATCTAAAATCGAGCGC 14419
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14299
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
14300 AATCCAAGATCTTTAAGTTTGAATGAAAAATATGAAGATAGTATTACTACATCTAATCTTTTTGTTAAACCAATTTTATACCCAGAAATG 14389
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
14390 TCTTATGAA---TTTGAATCTAAAATCGAG---CGCAAAAGTTTTTCATTTAAACTATTAAAGAAACAAGAGCAGGCTAAAATACCAAAA 14473
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
14474 TTCACTTATAAAAAAACATCTAAATTAAATACA 14506
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14609
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.14
14610 ATTAACACAGATTCTGAGGAGCA-AAATTGATATCAGATTTTATTTATGTAACATATCATTTTGACATAAATAATCTTTTATCTAATTGT 14698
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
14699 AATATAAATCATGTAAAAGATTTTCTAGTATTTATAGGTAATCATAACAAATTATTTGATAATCACTTATGCAAAAAACTAATTCTTACA 14788
31 N K K N I K - L D I D T H K H - P C W N S H - K K V F V L D 57
14789 AAAAAACAATATTTATCTAAATATTCAAAACTAATGGAAAAG 14830
58 S S N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14821
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 26 Length-adjusted: 0.37
14822 ATGGAAAAGGGTTTAGAAAATAAACTCCATAAAAAAACTAGTAGTATTCATACTCTTGATCAATACATTCAACATGATTTG---AATAAA 14908
1 M K K G I - H P L K K S L D V I M T N G S F I K T T V V S S 29
14909 ---AATGAACAGAGTACTAAA---GACTTAGCTATTTTAGCTAAAGAGATA---AATGCTGCTAAACTACTTTTAAATTGCTATTATAAA 14989
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
14990 GTAGTTGCTCAAAAATTTTATAATGCTCATTTTATA 15025
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 14959
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.14
14960 GCTAAACTACTTTTAAATTGCTATTATAAAGTAGTTGCTCAAAAATTTTATAATGCTCATTTTATAAAAGATGCCATAATTTATCAA--- 15046
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
15047 CATTTTGAATATTTTTATCTTCCAATAGAA---AT-AAGCGG---TGTTGGTCGCATACTAACAGTGTCACATATTTTAAGTTTTCAAAC 15129
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
15130 TA-ACAAGT---TTGCAAGACCATTTCTTAATT 15158
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15325
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
15326 AAAAGTACACCATTAATACAACATAGCTTAAGTTTTGATTATTTATCTAAAATGATACACATAATTAAAAATTATGCTAAAAAACCTGGG 15415
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
15416 GAGATATTAAATATTCTTAGTATTTTATATTATAAAGAAAAAAATGCTTTATATAACAATAGTGAACTTGTTATATTTTTAGATAGTACA 15505
31 N K K N I - K L D I D T H K H P C W N S H K K V F V L D S S 59
15506 ATGAGCGGGTCTCAACATTTAGCAACAATATTTAAAAAT 15544
60 - N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15493
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.13
15494 TTAGATAGTACAATGAGCGGG---TCTCAACATTTAGCAACAATATTTAAAAATAAATTAGCAGCTAAAAATAGTTGTTTAATTTCTACA 15580
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
15581 GATGAAACTAAATTTGACTTAAATATTAATTGCCTTGAAAAA---TTTCAGCTATTTATTACAAAAGCATTATCTGACGAAACTTCTAAG 15667
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
15668 TATTTAGCTAAATTTGACATAAACCGTAATGAT 15700
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15688
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.20
15689 AACCGTAATGATTTATATGCATTGAATTTAGCAGAAATTTCTAATTTACTTTGTAAAAAAATATTTAATTCTGAAATTACTATTTCATGT 15778
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
15779 TTAAAGTCATATTTAAAAAAAATGGCTTTTAAATATGAAGTGACTCCTTGTGCAATTTCCGATACTTATTCTTTTCCT---GATTCTTTT 15865
31 N K K N I - K L D I D T H K H P C W N S H K K V F V L D S S 59
15866 ATGCAAGAATGTAAATGTATAATATCAGATAAAGTT 15901
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 15805
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
15806 TTTAAATATGAAGTGACTCCTTGTGCAATTTCC---GATACTTATTCTTTTCCTGATTCTTTTATGCAAGAATGTAAATGTATAATATCA 15892
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
15893 GATAAA------GTTTTAATGAAGATA---TCAAAGAAAAAGAAAACTATTGTATTTTTAAAAAAACTATTAATAGTTTTTTATGATTAT 15973
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
15974 GCTATAAATAAAATAAATAAAAAAGAACCTTGG 16006
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16063
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
16064 TACGGAATGACAATAGGAGGTAGTCGTAAATCTATTTCAAATGCGCTCATTGAAAAAATAATTGAAAAAGGAAAATTTGATATAAACCTT 16153
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
16154 TCTTATATTCACATATTTTCTGATATATTATCTAAATATTATAAATATTTTTATAAAACTAATTATTTACCTTATTGTGATACTTATTTA 16243
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
16244 ACATTACGAGAATTTCTAAAGAAAATGGAAGGT 16276
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16258
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.10
16259 CTAAAGAAAATGGAAGGTCCTTTAACAATGTCAACAGAATTTTTAACATGGTCATATAATCCAAGAAAAATGAAAATATTACGTATAAAT 16348
1 M K K G I H P L K K S L D V I - M T - N G S F I K T T V V S 28
16349 GTTGTAAAATATTCAAAAATAACAAATGACCTTAAATCTTTGAAACGACGTATGATTAACGTAGCATATTTTACAGGAAAAATTGATCAA 16438
29 S C N K K N I K L D I D T H K H P C W N S H K K V F V L D S 58
16439 ACTAAAATATATAACTCAGTT---TCTGCTTTTATTATA 16474
59 S N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 16897
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
16898 ACTTCTATAGCTATATTTTGCTACCTAAAGTCCCTTTTAAGAGAGGTATTAAGCGGTGCATTAGTTTTGTTCTCAATAAA-ACT---TC- 16982
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
16983 CAAATAAAATTCGTTATTATAGACATCCTAACACATAGTAAAGGTTCATCTGTTAATCCTAGCAAGCCCTTAAAT---TCATCTGAAAAT 17069
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
17070 CTTTATGATTATCCATATTTTCAATATCTTATA 17102
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 18213
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.14
18214 ATTTCATTTAGTAAATATGCTTTCTTTAAAGCACTC---TT-ATTTTATGTGCCGGATCCGTTATCCACGCTACCGGCCATCAGGATATT 18299
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
18300 CGGCGTATGGGAGTTTATTTAAAGATT---ACCCATAACTTATGTTGC---AATGCTCT-TGC---TTCTTTATCTTTAATTGGTTTTCT 18379
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
18380 TTCTTAAGTGGTTTTTATAGAAGGATTTTCTTC 18412
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 19369
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.07
19370 ATGAAACGAGGTTTCTAAATATAACTTAAG---ATGGAACATTTAAAAACTAA-GGATCTCGTATTTTACAATTAATTATTGGATGG--- 19452
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
19453 CAGATAAAAAACGTTTTCAAAAGAATCATATTATTTTCTAATCCATTATTCATTTTAAGAATTAACATATTTTATTTTGAATATACT--- 19539
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
19540 CTT---CAAGAATTAAAAACA---TTACCTATC 19566
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 20166
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.24
20167 TTTAAGAAAAGTTA-GTAAAGATATTTAGAACGCTATTTTTGTTATATTTAATTATTAAACTAAACAAATCAACTCTTAGTTCTTCTTGC 20255
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
20256 ---AAATACAACAACACTACCAAATATGATTTATACTATTATCA-CAAACGATTACATTATTTAAAATA---ACTTATAAAATATCTTAG 20338
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
20339 CATATACAGTCCTTTAGGAAACATTGTAAAATT 20371
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22028
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.15
22029 TTAAAAAAAGATTTTATGTGGTTAGAAAAATTGATAGATATCAA-CGTGTAGTAAATATGGTGTGGAAATCCTAATCGTGTCTTGATATT 22117
1 M K K G I H P L K K S L D V I M T N G S F I K T - T V V S S 29
22118 TTAAATCGTGAGAAAAA-AATAAAGCAATCGCCGTGAAAAGTCAAGACATTACACAAAATGATAAAAAATTAATGAAAGAATCTTTACAA 22206
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
22207 AGCTTTCTGAAAATTTTC---TCAAAATTACGAATT 22239
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22896
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.18
22897 TATAAAAAATCTTTTAAAAAAGTAAGAAAAAAT---AATAATATAAAAAGTAATAAAAAATTTAAAAAATCTAAACGTCATACTCGTATA 22983
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
22984 TCAAAAAAA---ATAAAA------ATAAAAAATAATGAATAAATATCATATGCATAGCTTATCATTTTTTTGATATTTACAAACTATAAA 23064
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
23065 AAAAGTAATAAAATACAATCAAGAATTAAACTT 23097
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 25201
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.08
25202 ACAAAATTACCTGAAACTGTATGGGCAAAATCTGAGCAGGAACTTTCTTCTTCTACTTCTGAAATT---AGTCTTTTACTGGATGCTATT 25288
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
25289 AATTATCAA---GTAGAACGAACTCATCCTGAAGATCTCCATACAGTACTTGCACTTAAATCCTCAATTATGACTTATAATGTTTGTAAC 25375
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
25376 CTTCTTAATAAACTAGATGATCCAGAAGTAGTT 25408
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 27117
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
27118 CAACATAAGAAGATAAAAGAAGTAAAATTAAAGAGGAAGGTAATAACCATAAACTATAT-TATTT-AAACGAGGAAATGCCATATCAGGA 27205
1 M K K G I H P L K K S L D V I M T N G S F I K T - T V V S S 29
27206 GCACCTATAAGTAAAGTACAAACCAATTTCCAAACCCACCAATT-AAAGC-AGCATCACAAAGAAAAAAATCATAATAAGGCATGAGCAG 27293
30 C N K K N I K L D I D T H K H P C W N S H K K V F V - L D S 58
27294 TTACAATGTATTATAAAGTTGATAATTAAATTTAAAATT 27332
59 S N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 27912
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
27913 GTTGATCAAAGCTTCCATAAATGTTTCATATCAGAACGAGTTGG-TTAACAAAT------TTAGCAAGGAACAGTTATAAAACCATCTGT 27995
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
27996 AATTCGTTCACAAACTTGAGCAATTATGGAGCAACTTTCTCTCATTTCAGTAACCCTAATCATAAAACGGTCATAACAATC---TCCTT- 28081
31 N K - K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
28082 CAAACCTACAGGTATTTTAAAATTAAATTC---TTA 28114
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 27912
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
27913 GTTGATCAAAGCTTCCATAAATGTTTCATATCAGAACGAGTTGG-TTAACAAAT------TTAGCAAGGAACAGTTATAAAACCATCTGT 27995
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
27996 AATTCGTTCACAAACTTGAGCAATTATGGAGCAACTTTCTCTCATTTCAGTAACCCTAATCATAAAACGGTCATAACAATC---TCCTT- 28081
31 N K - K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
28082 CAAACCTACAGGTATTTTAAAATTAAATTC---TTA 28114
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 31462
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
31463 TTACCAAAA---ATCCATTATTTTATTTATTATATAAATTACATCTATAAGTTGAGTTATATTATTTACTACCGATATTATTATCTTATT 31549
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
31550 TATAGGTACTGTCTTTGCTTTAAAGCAACTAATTAAAAACATTCCTAGCTTATAGCGCATTGCAAATACTGCGTTTTT---TCTAGCACT 31636
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
31637 ATAATGTATAATCAACATACTCTTTTTATGCTT 31669
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34081
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
34082 TGTAGTAGGGGATGTGTTTATATTATTATTAGT---CATGTTACTATATGGGGTTTTAAAAGGATTGCGATTAACATGTTGATAATGTC- 34167
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
34168 CATTCTAGAGATTATACTTTAGAGAAGGAAAAAGGTAAACACTTCTTTGTGGATTACTCCCACTTCATCCGTTTTAACTTAGTATGGTCT 34257
31 N K K N I K L D I D T H K H P C W N - S H K K V F V L D S S 59
34258 TACATCCTATCGCAGTTGCCACGGTTTTATACTACA 34293
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34289
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.17
34290 TACAATGCTTTTATATACATCCTTACCATCTCTTTGATATACTTATATGCTTCTTTATCTCGCGAGGATATAAGAGTCTTTTTAAGCATA 34379
1 M K K G I H P L K K S L D V I M T N G S F I K T T V - V S - 28
34380 TCACTTTCTAAGATTACCTGTAAATTGTATATTGCCCCATATAGGTCATCGTCA---AATATACATAATTCGGTATTCTGCATACTTGTG 34466
29 S C N K K N I K L D I D T H K H P C W N S H K K V F V L D S 58
34467 AATAATGCTGTAACATCTGAAAGTATAAAGCCTTATCTA 34505
59 S N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34345
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.13
34346 ATCTCGCGAGGATATAAGAGTCTTTTTAAGCATATCAC-TTTCTAAGATTACCTGTAAATTGTATATTGCCCCATATAGG-TCATCGTCA 34433
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
34434 AATATACATAATTCGGTATTCTGCATACTTGTGAATAATGCTGTAACATCTGAAAGTAT-AAAGCCTTATCTATCTTTAAAGACTCCCTC 34522
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
34523 CTATTAAAGAAGTCGCAGATAAAACATCCACAC 34555
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 35104
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 4 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
35105 TTGATAAAAGAACAACATCCTTTGAAG---TCA---GATTTTATAAAGAATCAAAAAAGCTTGATCAAATAT---TA-GTGAAG---TT- 35180
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
35181 ---AGGTTAGAGATATATTTCAATATA---ACTTATAGGCT----TGTGTATGCTCATAAAAAAGATCATTTGTTATTAATAC-TCTTTT 35259
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
35260 TTAATACGTAATACTTTTGATCGTACTCATATG 35292
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 37234
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 32 Length-adjusted: 0.45
37235 GCTAAAGAAAAAATAAAAAAGAAGAAACAAAATATTGGCATAACAGTAACAAACCACGATAATAGAAATATTACGTGATTTATATCATCA 37324
1 M K K G I H P L K K S L D V I M T N G S F I K T T - V V S S 29
37325 TATAACATTCCA---TTG---CTAAAAATAAAGCGGAAGAAGAAACCCATGAGCATTTGCAATAATAAAGAACCTGTT---AAACTAATA 37405
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
37406 AATCTTTTACAAAAATAGCCCACTAAAAAATTCATA 37441
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 39832
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
39833 ATTACAAAATCAATAAAAGATAAAAAACAAGTATGCAGTTTAAAGCGTAGAAATGGAACGACGTTA---TTACAAGTTATGAAA---TT- 39915
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
39916 ACAAGTACTAATATTGGCTTT---ATGCCC---TACGTACAC---TTCGAAAGTTCAATTAAAAAATTATGTCTTATAACAGGTAG-AGC 39995
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
39996 ACGTTAATT---TATTCCAAAAAATTTAGAATT 40025
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 39832
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
39833 ATTACAAAATCAATAAAAGATAAAAAACAAGTATGCAGTTTAAAGCGTAGAAATGGAACGACGTTA---TTACAAGTTATGAAA---TT- 39915
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
39916 ACAAGTACTAATATTGGCTTT---ATGCCC---TACGTACAC---TTCGAAAGTTCAATTAAAAAATTATGTCTTATAACAGGTAG-AGC 39995
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
39996 ACGTTAATT---TATTCCAAAAAATTTAGAATT 40025
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42543
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.38
42544 GTTATTTGTAGCACAAGCTGCATTCTC---TTCGTTGATATTATTTTTCCATCAGGTGTGGGCGTGTTTTTACCGTTTAGTAAGAGCTTA 42630
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
42631 GTTGAAAGACAAATTACGTTCGATATTTGATATTCCAAAAAGAAGATCACATGGCTTACTAGAAAGAAAAAG---GTTCGCCGTTTATAG 42717
31 N K K N I K L D I - D T H K H P C W N S H K K V F V L D S S 59
42718 AATATGACTCCAGACTTCAAAAGACATTATAGATAT 42753
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42732
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.14
42733 TTCAAAAGACATTATAGA---TATAGAACCTT-TATACAATTATACTTACAGAAACTAGAAGATTTCTTTATACAGGC---CATATTTAA 42815
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
42816 AACGAAAAAAACGTA---TTAAATATACTTAAGAATAAGCGTTTTGAAAAAAAATTAGTACAAAATGACTACGTCCTTACTTTGACGAAT 42902
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
42903 GACCTAAAAACATTCCGAACTTAATACAGGTTG 42935
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 43333
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.07
43334 TTAAAAATTATAAGAGCTAAATTTAAGAGACT-TTATTAATTCTAAT-CTTAATAATTATTACTTTAAACATATGTATATATATTTTTTT 43421
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
43422 ATCAAATTTAATAATAGATTAAAAATACTTAGCAGCTCCTAAAAAGCTTGTTATTTTTTTAGAATAAGGAAAATAATATTTGATATCACG 43511
31 N K K N I K L D I D T H K - H P C W N S H K K V F V L D S S 59
43512 TGCATTTCTTATAAA---AAGTCTATCATCAATTTA 43544
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 44963
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.14
44964 ATTAATGTTAAATTATTAACACAAAAAAGATAATTAATAATGGTTTTCCGTAATTCAGAAGATATCTGTAACTTAATTGTTTCATATGTT 45053
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
45054 ACAATATCGAATGTAGGTGCTGTCCACAATATAAAAAGAGCATATCCCAAAGTTTCAGATTTCTCTTGATTTAAAAACTCTACTAACGAT 45143
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
45144 TTATTTAAAATCTTTAAAAAGAAGGATTCTAAA 45176
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45794
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.14
45795 TTTCCTAACAAGATCGAAACCATTATGCAGAATTTTATATTTGATATGTCTAGCCCACCTTTT---AATATGAAAGTGGATGGGCGTTTA 45881
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
45882 ATAATCAATGAACTTATCAAAAATGCTAGGCAACTCAAGAATCCTGAAAAAAAATATCTATTTTCTGTATATATTCTTGTTAGCGGTAAA 45971
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
45972 AGAGCTAACGTGTTACCTTCCGAAGCGAAAATA 46004
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 45798
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.13
45799 CTAACAAGATCG---AAACCATTATGCAGAATTTTATATTTGATATG-TCTAGCCCACCTTTT---AATATGAAAGTGGATGGGCGTTTA 45881
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
45882 ATAATCAATGAACTTATCAAAAATGCTAGGCAACTCAAGAATCCTGAAAAAAAATATCTATTTTCTGTATATATTCTTGTTAGCGGTAAA 45971
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
45972 AGAGCTAACGTGTTACCTTCCGAAGCGAAAATA 46004
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46208
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.11
46209 CGCAGCAAAGATCAAAAACCATTTACA---TCATTTAATATAAATATTCTAACTATAGCAAAACGTATCAAGGATTATGTTATTAATGAT 46295
1 M K K G I H P L K K S L D V - I M T N G S F I K T T V V S S 29
46296 ---AATGATATTCTTATGAATACGGATAAAGATAAATTGGCTCAAGCTATT---GAAAGTGCTAAACTTATTGATTTATCTAAACCTAAA 46379
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
46380 AAATCTAAAAATAAAATAGATCCTTCTAAAGCTGTT 46415
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46751
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.07
46752 CATATTGCATATATTCAACAATTAGAAGCTTTTCAAGCAGCAACTTATGTTGAAGGGAAATTTTCAGTGTTAGAGGGTATTGAATATATA 46841
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
46842 CATAATAATCAACCACGATTAAATAGGGTTGAGGACACCCATAGTTTACAAGGTGAAAATACTTCTTATCATCTTTTTATAGAAGAATAC 46931
31 N K K N I K L D - I - D T H K H P C W N S H K K V F V L D S 58
46932 AAGTCTTTTATTCTTGGCTT-AAATCCAGA---AAAACA 46966
59 S N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 46958
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.10
46959 GAAAAACAAGGTATT---GCTATTAATTATTTACAAACCATTATAACTTATCAACACAGTATGCTTTTAGATACAACACCATCTCCGCAT 47045
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
47046 GATATTGAAGTCATATTTGAAAGTTTAACAACCAAACCTTTAACTACACAAACATCTACTATCAAAATAATTATGCTTCCCGTAATTATT 47135
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
47136 GTTTTATTTATTACACTAAATGTATGTTCTATT 47168
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 48768
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.15
48769 TACCACTTCAATATTAAACACATAAAAAAATCGATAGC-GAAAAAGTACGTGAGGGAACT---ATGAAAAGCACTCGA---TCTAAAGAG 48851
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
48852 GTTGAAATAGATCTTGAAATAAGAATTTAAAAGCATTTGATGTTTTTCAAGGAAAAATACCAAAGTACTTTTGTATCATGGATCAACGAG 48941
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
48942 ATAAATGAAAAA---GCAAGCTTATATATTATA 48971
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 49775
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.10
49776 AAAAGAGTTAAAATAAAACGTACTAAAACGACACTG---GTAAA-CTAGTAAATTACTGCGGCGATGGATTAACTATACTAAAGGAACGG 49861
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
49862 CAAATTCAATCTGTAACTTTTGGAGAAAGATTATATAATTTTCCTTGTTTTTATAACAAGCGTAAATACCATAAGAGTTAGAGTATCAAA 49951
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
49952 GAAATTATATGATATAAAGCACAGTATTTTCTT 49984
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 52255
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
52256 ---AGTATGGGGATAAATAGGATTAGA---GACCTA---GTAGTCCATACCTTAAACAATGAGTGTTCAACGTCTTTAATATAGTCAATA 52336
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
52337 TATTTAGGGGGTTTAAAGCTAACGCGTGAAACACCGCCTGGGGAATGT---GGCCGCAAGGTTAAACTCAAAGGAATTGACGGT---GAC 52420
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
52421 TTATACAAGGGGTGGAGATGTGGTTTA---ATT 52450
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 52785
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.08
52786 AATCATTATGGCTTAAT-AGATTGGGCTACACATGTGT-ACATTGATGATCGACAAAAGAAGCAATGGCGTGAGCCTGAGCAAATCTTTA 52873
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
52874 AAAGACATTTCAGTCGAATTGTTCTTTGAAACTCAAGAGCATGAAGCG---GAATCTCTTGTA---ATGTGGATCATTACGCACGGTGAA 52957
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
52958 TTAGTACAAAAGTCACGTACAGACCGCCCGTAT 52990
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 54301
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 35 Length-adjusted: 0.49
54302 ATGTTACCT---ATGGACGTGGTCAAAGGGAACTTATTGTTGGTGATCGTAAACAGGTAAAACTACTATTGCTATGATACTATTCTTAAT 54388
1 M K K G I H P L K K S L D V I M T N G - S F I K T T V V S S 29
54389 ---CAACGTTATACAATGAAG---AAGATATTGATCTTATTGTGTGTATGTTGGAATTGGTCAAAAAAAAAGTTCTATTTGAATAT-TCA 54471
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
54472 AACTTACTTCAAAATAATAAAGCGCTCATTATACTA 54507
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 54316
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.15
54317 GTGGTCAAAGGG---AAC---TTATTG------TTG---GTGATCGTAAACAGGTAAAACTACTATTGCTATGATACTATTCTTAAT--- 54388
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
54389 CAACGTTATACAATGAAG---AAGATATTGATCTTATTGTGTGTATGTTGGAATTGGTCAAAAAAAAAGTTCTATTTGAATAT-TCAAAC 54474
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
54475 TTACTTCAAAATAATAAAGCGCTCATTATACTA 54507
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 54665
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
54666 TTAAGACGCCCA------CCAGGACGTGAAGCTTTCCAGGTGATGTTTTTATGC---TCATTC---AGACTT---TTAGAAAGAGCATGC 54740
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
54741 AAACTTAAACTAATTTCGGTGGAGGTTCTTTAACGCTTTACCTATTGTAGAAACACAAGCGGTGATTTATC-TGGTTATATCCAACTAAT 54829
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
54830 ATTATTTCTATTACGATGGACAAATTTTCATGG 54862
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 55426
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
55427 TATAGCTATACTATATATAACTTAAAAAAGAGATTA---ATATTTAAAGCAATA---AACTTCATATATATTTATATAATAGTAAAATTA 55510
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
55511 ---AAAAGA---TTAAAGGGCATTACTTCCATAAGCATACACATTACA---AATAAAAGTAACCAAACACAT---CAACGAAATGCCAAT 55588
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
55589 ACCAAGCCAAGCTTCAAATCCTAAATGACTTTA 55621
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 56423
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
56424 CATTTAAAAGAT---AATTAGAGAAAATACAATCTCGAGATTGTATCGCTAAATAAAAAAGTCATTATATTAAAAATATAAAAA---TT- 56506
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
56507 ---AAAATAATAATAAAATGGAATTTTGACGTT---GCATAAGCGTGTATGAGCGTAAATGTGAAGTAATATTATATAAAAAATAGTACA 56590
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
56591 CAAATAGCACCATATAAACTAAAATATAAGCAA 56623
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 57308
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
57309 ATAAGATAAATATCTCTTGCTTTAAGTCAACACCTACAGAAAAGCGCTAAGAAAAATGCCTTTATTTCCTTTTATATTTTGATTTTATGT 57398
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
57399 GT-CGTTTAAATTTAGTATTA---TTAGAAATTTTTTCATATTTTAGTCTTAATTCA---AAGAAATA-ATAGTATGAACATCTTCAGAT 57480
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
57481 GTAATAAATAAATTTTAATACCAACGACACCAAACG 57516
61 L L Q K F - K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 60767
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.15
60768 ATGAGCATATACTACAATAAAGAAAAAAGAAGCACCATTAGCATGAG-ATATCGGATAAACCAACCATAAGGACATCTCTCATAAATGCT 60856
1 M K K G I H P L K K S - L D V I M T N G S F I K T T V V S S 29
60857 CAACACTTAAAAAAGCTAAAATGC---ATTTGAGCAATAAAACATAACAAGAAAAATACCAGTAATAATTTGTATGCCAATACAACTAAG 60943
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
60944 CATATATACCAAAGTTATATTAT-AATTCAAAGTTG 60978
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61545
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.23
61546 ATACAATATAAACTTATGAGAATGGTGAAAAC-CTGCATATTAAAGTAAATAATTTTAACGCTTTATA-ACAACAAAATCCGGAGAGTAC 61633
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
61634 TCCAAAAAAACACAAAAAATGAAAACCGATGAAAAAAAAAACCAAAAAATAAAAAACACAAAAAAAATATTTTTAAATAAAAAATTTTTT 61723
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
61724 CCAATATTATTTTTTATAATAATATTAAAAATT 61756
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61559
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.10
61560 TATGAGAATGGT---GAAAACCTGCAT------ATTAAAGTAAATAATTTTAACGC----TTTATA---ACAACAAAATCCGGAGAGTAC 61633
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
61634 TCCAAAAAAACACAAAAAATGAAAACCGATGAAAAAAAAAACCAAAAAATAAAAAACACAAAAAAAATATTTTTAAATAAAAAATTTTTT 61723
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
61724 CCAATATTATTTTTTATAATAATATTAAAAATT 61756
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62137
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.20
62138 AAAAATGATAACTTATCTGATTTATTAGATGATCACAAAATTATTAATCGTATGCATGATTTTATTCATAAACAACCAACTCTTAGTTCA 62227
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
62228 AGAGCATTTCAATTAGCATTGGAAGTTTCATATTCTAAACGTTCTTTTAACGAAGCTACTTTGCAAGATTTTTTCAAAAATGAATTTAAC 62317
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
62318 ATTAGAGATACCTTTAATGTTAATAATGGAGTA 62350
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62389
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.21
62390 TATGTTGTATCTTATTATAATTTGAAT---TCAAAAGATATTATTGTTAATAGTACACCATTATATTTAACAAAAGATATTTCTCCTGAA 62476
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
62477 ATAAAGGCCAGCATGGAATTTAATAAAAATTTAACAGGAAATTCGTGTCCTGATATTACTTTAAAAGAACATCCTTATGATTTTAAAGAT 62566
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
62567 TCAAAGGATATAAAATGGAATAAAAATCAGATT 62599
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62536
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 17 Length-adjusted: 0.24
62537 TTAAAAGAACATCCTTATGATTTTAAAGATTCAAAGGATATAAAATGG---AATAAAAATCAGATTTATTTGGTTGATAATACTAGTTTT 62623
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
62624 AATGAACAGGCTATAATAATG---TTAAAT---CATTTGGAAAAATCTTTGATTAATCAATTAACTGTTAATCATTTGATGTCTAGTGAA 62707
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
62708 TGTGTTCTTTATACTAAAGATATTTTAGCAATT 62740
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 62623
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 240 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.13
62624 AATGAACAGGCTATAATAATGTTAAATCAT---TTGGAAAAATCTTTGATTAATCAATTAACTGTTAATCATTTGATGTCTAGTGAATGT 62710
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
62711 GTTCTTTATACTAAAGATATT---TTAGCAATTATGAAAAATAAAAGTACGAGCTCTGCTCAGGATATCTTTGAAAAAATACAAAAGCAT 62797
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
62798 CTTTTAAGTAACCAACCACCAAAAGATTTTCGAATT 62833
61 L L Q K F K S K - Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 1111
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
1112 TTAAGTAATAGTATAATATATATATATCGTATTTTATTTATTATATTTTTCATTTATTCTATATATTATTTGGATCTTTAACAAAACCTC 1201
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
1202 GTTTTATATAATGTTCGTTTATATCTTGGTAAAAAGACATATCATGTGGTTCAT---CATCTATCATTAATGTTTCTTCGTTTATATATT 1288
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
1289 TTAATTTTTTACTATATATCAAATTATGTAATG 1321
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 1664
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.11
1665 ATAGGCTCCTCAACAGGTTCT---TCAAAAGGTAAATCATTATTAATAACATCCGGTGGATTTACTATTGTAGGTGGTATTGTTTCAGTT 1751
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
1752 TCAATTTCAAATCTAGGGATAATTGTTTCACGTTTAAGATCAATATTAGG-TCTTCTAGGATATTCTATTTTAGGCTCTTTGGATTTAAC 1840
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
1841 AGGTATATCTTGCATTTGTACTGGTATCATATC 1873
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 1877
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 27 Length-adjusted: 0.38
1878 TCATGGACTGTATTTCGTATAATTGTTACAGATATATCTTCTGTTGAAACCCTTATTTTTTGTGTAACAAATTCAGTAATATCTAAATGT 1967
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
1968 AACTG-AAAAATTGCATCGTCACTATAAATACGAGAGCCTTCAAAACTTGGAGAAATTACACT---ATCTACATCTTCTATATTCATAAG 2053
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
2054 ATCCGTATAAGCATTAAAAAATTCTACTTTTAT 2086
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 2008
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.15
2009 ATAAAACTTTCGTTGTCAGCGGCAAAAAAACTATTGACAATTAGTTCCTTAAGTAATAAATTAATTAAATGATTAGTGTTTTGCAAATCA 2098
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
2099 GACGGTGTAAGATTACTATTTAAATTACTTTTTATAAAATATTCA---TGGACTGTATTTCGTATAATTGTTACAGATATATCTTCTGTT 2185
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
2186 GAAACCCTTATTTTTTGTGTAACAAATTCAGTA 2218
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 2479
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.13
2480 ATTTTTTCCGCTATAGTATCAGCTTCTATAAGTTTTTCTATTATTTTTTTTTCTTCTTCTTTAACTGCTGCAGATTTAATTGGTTCTTCA 2569
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
2570 CTTTTTTCAGTAGGAATACTAGACATTTCTTTGGGATACATTACATCTTGTGCAACTTCTTCAAGATCTTGTAATGTTGTACCTGATGGA 2659
31 N K K N I K L D I D T - H K H P C W N S H K K V F V L D S S 59
2660 AA-ATATTTTGTAATTTCTTGAGGTGTTTTACTCTC 2694
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 5335
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
5336 CAACATACTAAATACCCCCCAAATATTACTATTTTTGACGTTTTCATTAAGGATACTTCC---GATACAACTTCTATCCTAGATAAAAAC 5422
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
5423 ATTTTTAAATGAATAATATTTGGCATAAGCTCA---CAATATAAGGCTCTCAAAATATCTAAATCTTCACTTGTATAAAGAGCTTTTTTA 5509
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
5510 TTTTTATATTTATTTAAA---CAATATTCATTA 5539
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 6255
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.07
6256 ATGACTATCGGCTTACAAAGATACAGAAAGCTATTTATTTTTTTATTAAGTATTAAAGTTCGCATCATACTTACTCGTTATTAAATAATT 6345
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
6346 ATTTTTTTGAATTTGTGTTTTCTTATTAATCATCTTTCTTTTGTTTTTTTTGTATTTCATCATAAAATGTTGTTAAAATATAATTCAAAA 6435
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
6436 TTAAAGGAAAAATT-ACTTCAAAATTCTTATCC 6467
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 6855
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 7 Length-adjusted: 0.10
6856 TTTAATTCAGGAATTGGTTTTACGCTTGAAGAAGTATTATCTATTTTAGAGAAA---TCATTT---AAAACAGTAGTAGACGGGGTATGT 6939
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
6940 TGGGTATCATTAGTAATACC-AAAATGCAATGGAGGTATTGGAAATGTAGGATCACTAAGATTTATATTTTGATTTTCGTGACTTATTGT 7028
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
7029 GTTATTTATACTCTCAGGCAATGGTATTTGGTT 7061
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 7158
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.11
7159 ATACAAAAATTATTTAAATCATCAAGAGTAATATTTTCTTTGGTGATTTCTAAAGGA---TTTATAAAAATTTGACTTTTTGGC---TGT 7242
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
7243 AATTCTAAATACGCTCGCCCGTGTTTCGTAAATATTAAATCATTATCTTT-ATTACCAATACGTATATGACCATCACTTTCTGTTTCAAT 7331
31 N K K N I K - L D I D T H K H P C W N S H K K V F V L D S S 59
7332 AATAACTGCAGGAGATTTTGTTATTTTTATCAAGTT 7367
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 8508
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.20
8509 AATAAATTATTATACCATTCTATTGTTGGACGTATAAT-ATAATAAAAATGAGGTGTTTTTTGCTCGTAATATATCTCATCAAAATAAGT 8597
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
8598 AGGAATAAATGTTCTAAAAGAGATCTCCATATCATTAGGCGGAATACATTCAT-CATCATCATCCTCATTATAATCAGGATGCCAAAAAT 8686
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
8687 CTAATTCAGGAGGTAAGACATTTGGTTTATATG 8719
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 10736
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 6 Length-adjusted: 0.08
10737 ATAAAATATAATGTATTCCTTGACAAATATATTATTATAAATATATATATTACCAATATTAAATTAGTATAATATAATATTTTTATTATC 10826
1 M K K G I H P L K K - S L D V I M T N G S F I K T T V V S S 29
10827 CATAA-ATATCTAAAATTCA-CTAAATATTGATAACTATGCTCATATAATATAAAACTTAATAATAAAGGTATTGTTATTATCATGCAAT 10914
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
10915 TATAGTATGACATACTATAACAAAAATTATAATATA 10950
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 11296
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.35
11297 ATGAAGAAA---ATCAAGTATTTTAATAAG------AATATTACGTTATCTTGTGGACCATCAATAGATAACCATTCTATCATTTTTTGT 11377
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
11378 GTGAAGAAGGATCTG---TTA---ATAACAATTTTAAAAAACCCATCATAT---CCATTCAAATTTTTGACTATTTAAGAATTCTCCTAT 11458
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
11459 TTTGTTATATATTTTAGTAATTGGATTTTTATC 11491
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 11296
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 25 Length-adjusted: 0.35
11297 ATGAAGAAA---ATCAAGTATTTTAATAAG------AATATTACGTTATCTTGTGGACCATCAATAGATAACCATTCTATCATTTTTTGT 11377
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
11378 GTGAAGAAGGATCTG---TTA---ATAACAATTTTAAAAAACCCATCATAT---CCATTCAAATTTTTGACTATTTAAGAATTCTCCTAT 11458
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
11459 TTTGTTATATATTTTAGTAATTGGATTTTTATC 11491
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 12116
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
12117 AAAAAGCATATAATAAGTATAATACATATTAGTATGAATTATCTCATAAATAATAACTA-TACTTAATAATAAAATATGTAAATATTTGC 12205
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
12206 CAAAGGCATCAAAATGTAAATGAATATATA---ACAAACGAAACATTTTC-TTACTACATTTAAAAAATAAATGTATCATAAAAGTGTTT 12291
31 N K - K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
12292 TGATATATAAATAAATTTAGTGATAATTTTGTAACA 12327
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 12621
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
12622 CCAAGAAATAATATTGAATTTTTTATTAAAGACATATTCTGTAAAATCATCAATTTCAGCTGTATTAGACAAAGTAAAAATTTTAGTTGC 12711
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
12712 TG-AA-TATAATATAAAAATTAATGGCAATAGAAT-AAAAAAAGAATATATATTGTAATTAAGTATTTTTATTATTATAGAATATCTAAT 12798
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
12799 AACATCATAAAG---AAAAATTGTCATAAAAAG 12828
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 14151
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.23
14152 AAAAGATTAGATGTAGTAATACTATCTTCATATTTTTCATTCAAACTTAAAGATCTTGGATTATTAGATCCAGCAGTACTCGATTCTTTA 14241
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
14242 ---AAAATGTTATGTTTTATCAAATATTCAATAAGATAAGAACCTATTCTTACTGCAAAGGCGCCTGTTTGTTCTAATAAATCATCTGGA 14328
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
14329 TTGTTTTCTTTATTCCAAAGCCATTTGAAAATT 14361
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 15026
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.13
15027 TGCAAAAAGTGCTTTCATTTTATCATATAT---TTCGAA---ATCCATAGTAATTTTATTTTTTATGAAATAATTAAGAAATGGTCTTGC 15110
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
15111 AAACTTGTTAGTTTGAAAACTTAAAATAT-GTGACACTGTTAGTATGC---GACCAACACCGC---TTATTTCTATTGGAAGATAAAAAT 15193
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
15194 ATT---CAAAATGTTGATAAATTATGGCATCTT 15223
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 15696
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
15697 TTATCTGATATTATACAT---TTACATTCTTGCATAAAAGAATCAGGAAAAGAATAAGTATCGGAAATTGCACAAGGAGTC---ACTTCA 15780
1 M K K G I H P L K K S L D V I M T N - G S F I K T T V V S S 29
15781 ---TATTTAAAAGCCATTTTTTTTAAATATGAC---TTTAAACATGAAATAGTAATTTCAGAATTAAATATTTTTTTACAAAGTAAATTA 15864
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
15865 GAAATTTCTGCTAAATTCAATGCA---TATAAATCA 15897
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 17676
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
17677 GTTGAAAAGAATATGAAAAAAGCTAAAAGTAGTATGTTCATATTGTGAACAAGTAATTCT------AAATCTTCTAAA---TCAAAG--- 17754
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
17755 AATTAAAAAATAATAAATAAGACCCATAGCACTTATGAAAGC---TGCATCACCTCACGATTAAAAATAATTGCTTTAATAGCAGACTGA 17841
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
17842 TTGCTTGATTTCTTGTATCCAGAAATTAATAAG 17874
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 17682
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
17683 GTTGAAAAGAATATGAAAAAAGCTAAAAGTAGTATGTTCATATTGTGAACAAGTAATTCT------AAATCTTCTAAA---TCAAAG--- 17760
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
17761 AATTAAAAAATAATAAATAAGACCCATAGCACTTATGAAAGC---TGCATCACCTCACGATTAAAAATAATTGCTTTAATAGCAGACTGA 17847
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
17848 TTGCTTGAT---TTCTTGTATCCA---GAAATT 17874
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 21841
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
21842 TTTAAACGC---ATACATGATATCGAACAC---CTG---GTAATCAGGTACACGACCTCCCCTATCATTACTTCATTGTTTTTT---TGT 21919
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
21920 AATCTATACCAAATC---CTG---GTATATAAGCAATTAAATAACACCATT---AGTTAACAAACTTTTGTAATTTTGCGTTTGCAGAAT 22000
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
22001 TAGGTTTCTTGGTTTAACTGTTCCTACTCCATG 22033
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 23092
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.13
23093 TATAAGAAAAAATTCCC-ACAGATAACAAACTAAGCAATATTAGCAGAACGGTTGGATCATAT---AGTGAATGCATACAAGAGCTTTAT 23178
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
23179 ATTCAGAAGAATATTACGTTTAAATCAATATATCGTATATACGTTTACTGTAATCACCACACGTGGATGATTATTTGTCCATTAAAACAC 23268
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
23269 CACCTTTACTT-TTTAAACGACAACTTAAAGTT 23300
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 25503
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 12 Length-adjusted: 0.17
25504 TCAAATTTAGGGTTAAACCCA---AGGCAATCTCATCAGTATAGGTAACCTAAT---TCCTATAGAGCGATCTCCTATATAGCCCAATGC 25587
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
25588 TCAAGGATAAACGTTTATGAGGAAAAATTTATACAAACTGCCCATAAACAAGGTTACTCCCATTTCACCTGTTTAATTGTTTTTATCTTT 25677
31 N K K N I - K L D I D T H K H P C W N S H K K V F V L D S S 59
25678 TATTTAAACCAAGCA---AAAATGAAGTTTAAA--- 25707
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 28376
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
28377 TGTAGAAAATTTATTAATGATTTATGTGCTAAAGCATTATACCTTATATAGATATACAGAAAGGGCTCGCTATATTCGTGTCTGTTTTTA 28466
1 M K K G I H P L - K K S L D - V - I M T N G S F I K T T V V 27
28467 GAAATTACTAGAATTTTAAATCATTTATTAGC-TGTACGACACATGCTAT-GGATGTTGGTGCCTTAACACCATTTCTGGGCTTTTGAAG 28554
28 S S C N K K N I K L D I D T H K H P C W N S H K K V F V L D 57
28555 AGCGAGAA-AAATTGATGAATTTTATGAACGTGTATCGGTGC 28595
58 S S N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 28912
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.07
28913 TTTAAAAGTGATGCTGTTCCTGGCCGTTTAAATCAATATCTTGTTATATCAACCGTCTGGTATTTACTATGGCCAATGTTTGAATTATGT 29002
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
29003 GGAGTT---AATCATGCTTTT---ATGCATTGCAAATCGTATCCTTTAAATGGGATTAATATAAAAAATTTTTAATGTTTTAACATAAAG 29086
31 N K K N I K L D I D T H K H P C W N S H K K V F - V L D S S 59
29087 AATATTTTTCATAAAAATGTTAAGTCAAGGAAAAGTATA 29125
60 N L L Q K - F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32363
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.23
32364 TTTAAGAAAGGCATTCATGAATG-ATGTACAAC---AAGCTTCTGATCCA-TCA---ACGGTAATCCAAGATCCGCTGTATTTAGACTCG 32445
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
32446 ATAAAACAA---TTGGATATTCATCTATCTACATTCTTGCATAATATGCGCAACCAATTCCGCAATGCGTATACAATCCATAAAAGTAAT 32532
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
32533 CTA---AATCTGTTAAAGGTTAATCTAGAGCTT 32562
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32417
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 32 Length-adjusted: 0.45
32418 CTCTCCAAAGGTATTCAACCAACAATTTATTGTGAACCGGTAATACAAGCATGGCTATCGTTTCCTTCAGATTTAAGAAAGGCATTCATG 32507
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
32508 AATGATGTACAACAAGCTTCTGATCCATCAACGGTAATCCAAGATCCGCTGTATTTAGACTCGATAAAACAATTGGATATTCATCTATCT 32597
31 N K K N I K L D I D T - H K H P C W N S H K K V F V L D S S 59
32598 ACATTCTTGCATAATATGCGCAACCAATTCCGCAAT 32633
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32723
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
32724 CTACGTCCACTCTTAAATCCTTTCCCATCAGTTGAATCTAAAGTTCC-CTAATACGAAGTAAAGTTAATCCATTAATAATTTCTCAAGAT 32812
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
32813 TCTCAGTGGTGTAGTGCTATTGCGAATATCTTTTTAAAAGATGCTAATTTGGCAGATTACTTAAAGATATTTCCCGTA---GGCGCAAAG 32899
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
32900 TATTTAAGTTCCTTTGAACAGAAAACAATATTA 32932
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 32872
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 15 Length-adjusted: 0.21
32873 ATATCCAAACTTATTAATAAACCTTTAGACAAGTTTTTTGGATCTACCTTATCAAATAATTCTTATTCACTTCTTATCAATTATTTAACA 32962
1 M K K G I H - P L K K S L D V I M T N G S F I K T T V V S S 29
32963 AGTACAACTAAGATTATCTTCTTACATGTTGAAACACTAATTTCTCAAGCCCAGTCCTCTTCACTACGTCCACTCTTAAATCCTTTCCCA 33052
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
33053 TCAGTTGAATCTAAAGTTCCCTAA---TACGAAGTA 33085
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33394
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 18 Length-adjusted: 0.25
33395 GAAAATAAACTCATCAATAATTTAAAAGACGACTCTTTAATCACATTGTATAATAAATATTTGATACATTCCCCGGATGAGCGTGCA--- 33481
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
33482 GAGTATGTCGACATCTATTTACCGTTGAAGGACTTCAAACATAACATTAAAACCTATTTTAATGAAATAAATCATTTATATCATACATCA 33571
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
33572 TAT---CGCAAATTCAAATTAGCACCGGATTTA 33601
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33460
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 20 Length-adjusted: 0.28
33461 AAACTTAATATACTGACTCCCATAGCAGAGTATTATAATACTATGTTTTCCAATGCAGTATTAAAGGAAACAGAAAATAAACTCATCAAT 33550
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
33551 AATTTAAAAGACGACTCTTTAATCACATTGTATAATAAATATTTGATACATTCCCCGGATGAGCGTGCAGAGTATGTCGACATCTATTTA 33640
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
33641 CCGTTGAAGGACTTCAAACATAACATTAAAACC 33673
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33796
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 14 Length-adjusted: 0.20
33797 CAACTAGATTCCTTGCATGTAATACAAAATAAATTGAATCCACAGATACAAGAGCAACTGCTTGCGTATACTAAAACGAACCACGAGAAG 33886
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
33887 TTACAAGAACTTTATAATCGTCAGGTTATATCTCATGTGCATCCCGAG---ACTACACATACAGCCTTATTT------CAAACGTATGTC 33967
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
33968 CAAATAACAAGTTATCATGGAAAAACAACAATT 34000
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 33952
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 32 Length-adjusted: 0.45
33953 CAACATGTTAATCGCAATCCTTTTAAAACCCCATATAGTAAC---ATGACTAATAATAATATAAACACATCCCCTACTACATTAAATATA 34039
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
34040 AATCCGCTTAGCAAGAAGCAAAGTCAAAGAACCTCTCCGAATAAAAAAAGCTTATCACAACCGAAAAGGTATCAACTAGATTCCTTGCAT 34129
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
34130 GTAATACAAAAT---AAATTGAATCCACAGATA 34159
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 34401
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.11
34402 TTAATAAAGCTTTTCAACAAAGGTAAAAAGACCCTTATATGCCAACCAACTAATAAAGAGTGT---GGATGTTTTATCTGCGACTTCTTT 34488
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
34489 AATAGGAGGGAGTCTTTAAAGATAGATAAGGCTTTATACTTTCAGATGTTACAGCATTATTCACAAGTATGCAGAATACCGAATTATGTA 34578
31 N K K - N I K L D I D T H K H P C W N S H K K V F V L D S S 59
34579 TATTTGACGATGACCTATATGGGGCAATATACAATT 34614
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 35847
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 28 Length-adjusted: 0.39
35848 TATTTAACCTTTATATTCGCTGTAATACGAGTTATATTGTGGATCCATAATAATTTAATAGTAAAATTAAACCATACTTGTATCAAGAGC 35937
1 M K K G I H P L K K S L D V I M T N G S F - I K T T V V S S 29
35938 AGCACTGAAAATAATATCATACTATATATTTACCTAAAAAATCATCA-ACACTAAAGAGCCATTATAAAGTTATATTAACACCTAATAAA 36026
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
36027 TAATTTCTAATGCAAAAATACGAAAAGCAGATTTGGTTT 36065
60 - N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 38377
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
38378 ATGAAATCCTTTTCCTTTACCCTTTATGCACAAGTATTTTAGATTTTAATGAAATGAGATATTTTATCTAGTTCTCTTTTTTATCATTGT 38467
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
38468 TACTCTAGG---CTATTATATGAAATATCTCGCCATATTGTTAGTTTCTTTGAATATGATAAGTAATTAATAGTCTTTTACACATAAAAA 38554
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
38555 TTAAAAGGTAAATTTTATATTATGATTCGTATA 38587
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 39784
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
39785 GTTATAAGACAT---AATTTTTTAATTGAACT-TTCGAAGTGTACGTAGGGCATAAAGCCAATATTAGTACTTGTAATTTCATAACTTGT 39870
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
39871 AATAACGTC---GTTCCATTT---CTACGCTTTAAACTGCATACTTGTTTTTTATCTTTTATTGATTTTGTAATATG-GAATCATTTAGT 39953
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
39954 CTAAATAAGCGTTTTATGAAAAAATAAAGGATA 39986
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 40404
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
40405 ATAAATAAACTGTTTGGTTCTTTGTTAAAAAGCTTTTTAATAATAATTTTGTTTAC-TTAAATACCTTCAATGCTATTATTTCATTAAAT 40493
1 M K K G I H P L K K S - L D V I M T N G S F I K T T V V S S 29
40494 TGTAATAAAGATAAGAAGAGGCAATATCATATAAAAATTTCAGCTATAGTTTGCCAGATAACCTATTTTTTTGGATTTTA-TTAGATCAT 40582
30 C N K - K N I K L D I D T H K H P C W N S H K K V F V L D S 58
40583 TATATAAATTGTCTAAGAGGTTATAATAAGTCCTTTAGTTGT 40624
59 S - N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 41153
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 3 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
41154 ATATAAAAAACAATATTACCTGCAAAGCTTTATAAGGATTTAATTATA---AATGGCAT-TGCATTAGCTTTTGTACGTTGTCCTT-TGT 41238
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
41239 ---AGGAAGATTTTGAAATA-AAC---GATACATTTATAACAATATGTAAGATTTTATTTCGTAAGTATTTTCCA---CACACAACGAAT 41318
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
41319 TTT---CATATCTTTTGGTATTTTTTTCCAAAT 41348
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 41655
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
41656 ACGAAATCATTAGTATTGTTCTATTAGAAAAAAATATACCAAATAAATCGTAATTTCACGTTCAAGCCAAATGCTGATGGAAATAAATC- 41744
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
41745 AATTATAATGGTGTTGTTAAATTGTATTATATGTTAAATAATATGCTGTGCTTTTGTATAAGTACAAAGACATATATAATAAAAAACGTT 41834
31 N K K N - I K L D I D T H K H P C W N S H K K V F V L D S S 59
41835 AAATTTATTTATTTGATCAATAGCGTAGCTGTAATT 41870
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 41984
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.18
41985 TTTTGGAAAAATATATCACGAAAATATGATTCCTTAAATATCTTTTTCTTTTCGACGTTTATTTTTTTTATACCAAATAACGTTTTATCT 42074
1 M K K G I H P L K K S L D V - I M T N G S F I K T T V V S S 29
42075 TTCTTTAAATTTTCTTCTAAGTTTACTATG---CGAAT-AAAGTAGGTTTTTTATATTTTCTTCGACCTTTATTTTTGTACGATAAAGTC 42160
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
42161 TACCTCTACAAAAGTTTTAAGCATTATCAAAAAATT 42196
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 42527
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.11
42528 TTGAAGTCTGGAGTCATATTCTATAAACGGCGAACCTTTTTCTTTCTAGTAAGCCATGTGATCTTCTTTTTGGAATATCAAATATCGAAC 42617
1 M K K G - I H P L K K S L D V I M T N G S F I K T T V V S S 29
42618 GTAATTTGTCTTTCAACTAAGCTCTTACTAAACGGTAAAAACACGCCCACACCTGATGGA---AAA---ATAATATCAACGAAGAGAATG 42701
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
42702 CAGCTTGTGCTACAAATAACCACAAGCTTTAGCACT 42737
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44368
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 0 Length-adjusted: 0.00
44369 GAGAATGATATTATCAAAAAATATTCGTATAGATTTAGTATTTATCATAATTATGGTGTTTCTAATAATCAAATGATTGTTACT---TTT 44455
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
44456 CCTTCTATTTTTATTCAA---GGAATTGATGCTCATATTTTCCATAAGTGTTTGAATAATAT-TCATATGCTCATATACTA---GTATTT 44538
31 N K K N I K L D I D T H K - H P C W N S H K K V F V L D S S 59
44539 ATTGTCTTGAAGGCTTATAATTCTATAAATTCTTTC 44574
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 44596
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 2 Length-adjusted: 0.03
44597 CAAGAGTTTCGGGAGTTAGATTTTCAACAATATATTGAAGATTATTATTCATCTAAAGGATTTAATAAAGTACCCATAGACTTTTCA--- 44683
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
44684 CGCATGTTGAATTTA---TTAAAAGCAATTTACGAGTGATATGGATGTTATCAAGATAAAGCTAAAATATTTATCCTGGGAAATGACTCA 44770
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
44771 GGTAGAAAAACGAGTTACTCGACATCGTTTCTC 44803
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45199
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
45200 ATGGTTAAA---ATCACATGTAAAAAAAAAAATAAAAATATATTATATGCAAAA---ATCTTAATAGAAAGT---TTAATAACTAAG--- 45277
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
45278 AATTTTAAAAATCTGATATATGAGAAGGATGCTAC-ATCAAGTGGCCTACAGATAATAGCGAT------GTTATTGGTTCAGAATCTTCT 45360
31 N K K N I K L D I D T H - K H P C W N S H K K V F V L D S S 59
45361 GATATTTATCAGATAGCGATAAATTCCTTTATTTAT 45396
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45485
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.13
45486 AGAAAATTTAAAATAATTCCTTTAACGATTTTGAAACGTTATTATCTTTCTGATAAATATAATTTTAAAGAAACAAAGTACTTAGCTCAA 45575
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
45576 CAACAGCAAGCATTTTGTTTG---TTCGAGTATTACAAAAACGGTTATATTATTATTCATTCTCATTTCTTTATGAACCCTGTACTTTCT 45662
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
45663 TTTACCTATACGTTCGGGATAAAGGAAAATATT 45695
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45680
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 13 Length-adjusted: 0.18
45681 AAACGCCCATCCACTTTCATATTAAAAGGTGGGCTAGAC---ATA---TCAAATATAAAATTC------TGCATAATGGTTTCGATCTT- 45757
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
45758 GTTAGGAAAAATTTCAAAATAACACAAAAATTATTATTTCAAGAAATCTTGTATAATGAAACAAAGTTTTTTGCCAAATTAAAAGCTGCT 45847
31 N K K N I K L D I D T H K H P C W N S H K K V F V - L D S S 59
45848 AATCCTACACTGGATATCAGA---AAATTTAAAATA 45880
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 45920
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
45921 TTCGATAAACGAGTACGTATACTTTCAAAACGTTTAAGGACTCTTTTTAGTATAGTATATTTCTTA---TCCCCAATCTTAGCCAATTTT 46007
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
46008 GAATCGTTTAATTCGTCCAGGGCATCAGATATTAATATTTTCGCTTC-GGAAGGTAACACGTTAGCTCTTTTACCGCTAACAAG---AAT 46093
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
46094 ATATACAGAAAATAGATATTTTTTTTCAGGATT 46126
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 46388
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
46389 CTTTATGTTATTTATCATTTTTTTATATCTAAATGCTTTCGAATTTTATAAATTGGTAAT---GTAGATATCATAATTTTAAATATTATT 46475
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
46476 AATAGGATTATTATCAGA---AGC---GACAGCTTTAGCTATGCTAGCAGGGGTGGAACCCCTTTTATTTTTCTTTTTACTAGTAGT--- 46556
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
46557 ATTAACAACAGCTTTAGAAGGATCTATTTTATT 46589
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 46934
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 1 Length-adjusted: 0.01
46935 ATAAATAAAACAATA------ATTACGGGAAGCATAATTATTTTGATAGTAGATGTTTGTGTAGTTAAAGGTTTGGTTGTTAAACTTTCA 47018
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
47019 AATATGACTTCAATATCATGCGGAGATGGTGTTGTATCTAAAAGCATACTGTGTTG-ATAAGTTATAATGGTTTGTAAATAATTAATAGC 47107
31 N K K N I K L - D - I D T H K H P C W N S H K K V F V L D S 58
47108 AATACCTTGTTTTTCTGGATTTAAGCCAAGAATAAAAGA 47146
59 S N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47164
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 22 Length-adjusted: 0.31
47165 ATGCTAGCGTCTAATTTTATTTTGTTTAAA---TTACATATTTTGCGAAACTTTAAGAGTTACAGTATTTGTTGTTATATATTAATCTTT 47251
1 M K K G I H P L K K S L D V I M T N G S F - I K T T V V S S 29
47252 TTAAGTAGCTCTCGTATGACTCTTGATATACCAAATGCTAGTTATGCTTGCTTCTGGTCTTACTTTTCAAAAATCGAAGATTTGTTAAAT 47341
30 C N K K N I K L D I D T H K H P C - W N S H K K V F V L D S 58
47342 GATAACATAAATCATAAAATTTTTCCTAATTCATTTTAAATA 47383
59 S N L L Q K - F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47317
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.15
47318 CAAAAACAAACTCTAATCAAATCTGGGATATTGCAACCCTTTTACATTTCTAATAAAAGTACCTTTAAAAAGAAGAGCTTAAGTTATTGC 47407
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
47408 CTACAGCTAAAACGAAAAAGTTACTTACTTATTTTGATACTGATTTAGATTAATAATATGCTAGCGTCTAATTTTATTTTGTTTAAATTA 47497
31 N K K N I K L D I D T H K H P - C W N S H K K V F V L D S S 59
47498 CATATTTTGCGAAACTTTAAGAGT---TACAGTATT 47530
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47675
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
47676 AAGGAAAAGAAAATAAAA---CTTGAACTTAATTTGGGATTACAGATCCTTAATTGGTTGATAGATCTAAATATTCTTCAGGAAGAAATA 47762
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
47763 GATAAGCGTAATGTTCCTCATATTACATTTTGGCATCTGCC-ACTTTATATAAGCCTCATATTTCGAATCATATCTATCCTTCAGTT--- 47848
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
47849 TATAAACAAAAGTGGGTGAACAATTCAAAATTA 47881
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 47860
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 8 Length-adjusted: 0.11
47861 ACTAAGAATAAATTATCTTTGGTAAAGGAATATTTATCAGCCTTGAAAGATAATAAAGATGAGACAGCATACAAAAGAATAATTCCACAA 47950
1 M K K G I H P L K K S L D V I M T N - G S F I K T T V V S S 29
47951 AATTGGAATGCAAAAACTCGTCAAGATATGATAACGTATTTGGAC---GTTTATATTTCCGAAGAAGAAGCTCTA---TTTGATAATCCT 48034
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
48035 ACTTACATATCTTCTAAGGAAAAGAAAATAAAACTT 48070
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 48898
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
48899 CAACAGAAAAGGGTTCATCCT---CCAAAA---------GTTGTTAACTCATTTCAATCTCTCATGATTAGATCACTAGTTTCGGGTTTA 48976
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
48977 AATGA-AAAAACTCAAAC---GATTTAAAA---TTTGCTTTCCTATGCTATATAATATATAAGCTTGCTTTTTCATTTATCTCGTTGATC 49059
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
49060 CATGATACAAAAGTACTTTGGTATTTTTCCTTG 49092
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 49956
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 4 Length-adjusted: 0.06
49957 ATTAAATTATCTGAAAGAGACTTAAAGATAATCAGTCTCGTTTACCTACTGACACCGGGCAGGTCTCAGACCTATACATCATATTTATAC 50046
1 M K K G I H P L K - K S L D V I M T N G S F I K T T V V S S 29
50047 TT-AGCAGTCCTGTGTTTTTAATAAAC---AGTCGCTACCCTCTATTCTGTGCCATCACACATAAGATTTCACGAGTAATTTTCTATAAA 50132
30 C N K K N I K L D I D T H K H P C W N S H K K V F V L D S S 59
50133 GAAAATGAAAGAAAATACTGTGCTTTATATCATATA 50168
60 N L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 50164
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 9 Length-adjusted: 0.13
50165 AAGTTCACAGGGTCTTTCCGTCTGGCTATTTCTATATCGTATCTTCACAATAATTCCAATTTCATTGGATCTACACTA---GAGACAGTA 50251
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
50252 GGGAAG---TCGTTACCATTC---GTGCACGTCGGAACTTACCCGACAAGGAAT---TTCGCTACCTTAGACCGTCATAGTTACAGCCGC 50332
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
50333 CTTTACCAGTGATTTAAGAGACTAAC-AAATTA 50364
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 50876
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.23
50877 ATCAAATCTTACGA-CATGCATTTCATGAGCCTATTGACGTTATAGTCTACAACGTTAAA---AAGACTTAAAGTATTATTTCTCGCTT- 50961
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
50962 ---AGATGCTTTCAGCGATTAATAAAAGATTCGTAGCGAATAGCGTGCGCAAACAGCTCAAAAACCAGAGAATCGTTCCACCAGTCCTTT 51048
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
51049 CTACTAGACAGAACAACTTTTACGTCTTATGAAATA 51084
61 L L Q K F K - S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 52121
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 3 Length-adjusted: 0.04
52122 ATTAAAGACGTTGAACACTCATTGTTTAAGGT-ATGGACTACTAGGTCTCTAATCCTATTTATCCCCATACTTTAGTACCTAGCGTTAGA 52210
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
52211 TCAGAATCGGATGTTGCTTTCGCTATCGAATGTCTTCCAATATCAACAATTTCACCCTTCCTTCGAGAATTCAATAAACCGCCTTCTGAA 52300
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
52301 CTC------AAATA-ATGAGTGAATACAGAATG 52326
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 52222
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 11 Length-adjusted: 0.15
52223 TATAAGTCACCGTCAATTCCTTTGAGTTTAACCTTGCGGCCA---CATTCCCCAGGCGGTGTTTCACGCGTTAGCTTTAAACCCCCTAAA 52309
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
52310 TATATTGACTATATTAAA---GACGTTGAACACTCATTGTTTAAGGTATGGACTACT---AGGTCTCTAATCCTATTTAT-CCCCATACT 52392
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
52393 TTAGTACCTAGCGTTAGATCAGAATCGGATGTT 52425
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 54561
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 2 ||| 2 Nt shifts: 0
Score: 10 Length-adjusted: 0.14
54562 ATTAGTTTAAGTTTGCATGCTCTTTCTAAAAGTCTGAATGAG---CATAAAAACATCACCTGG---AAAGCTTCACGT---CCTGGT--- 54639
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
54640 GGGCGTCTTAATATAAAGATAATTGTCAT-AAGCAGCAGCATGTTTTGTTAAATCATCATAAATAATTAAGCATGTTCACCTTATCA--- 54725
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
54726 CG-ATA---AAATTCAGCAATGCACATCCTGTA 54754
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59453
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 0 ||| 2 Nt shifts: 0
Score: 5 Length-adjusted: 0.07
59454 GCAAATAAA---ATAAAACCATTTAAAAAGGAAATAAGAAACTTGGAACCATCC---TCCAAGAAAAAGAATAGTTGTGTAAACGACCAA 59537
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
59538 ATATTAAATTACATATTCTGCAATAAAATAAAAAGCAAAGGACCACTAGAATATTCACACTATAACCTGCAACAAGTTCACTTCAGC--- 59624
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
59625 TTCAGGCAATCA---AAAGGAGTACGATTAGTT 59654
61 L L Q K F K S K Y K I 71
DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 61238
Protein: lcl|KC353356.1_cdsid_AGH24321.1 [gene=rpl31] [protein=ribosomal protein L31] [protein_id=AGH24321.1] [location=67498..67713] @ 0
DNA length: 426 Protein length: 71
1 Nt shifts: 1 ||| 2 Nt shifts: 0
Score: 16 Length-adjusted: 0.23
61239 AAAAAGCCATCATCAAAGCCAAAAGGCCACAGCTTCAGTTACAGCAAACCCAAGCATGCATACTTAAATAAGCGTTGTTCTTCTGCCGAT 61328
1 M K K G I H P L K K S L D V I M T N G S F I K T T V V S S C 30
61329 TACGGCTTAAACCAAAAACTAAGAACCAAAAACAATACCAACACCGT-ACCAGCACCTGCTAATCCATTGTTGCTAAACCAGCACCATAC 61417
31 N K K N I K L D I D T H K H P C W N S H K K V F V L D S S N 60
61418 TTTTACCAGAAGTTAAATAGAATTTACAAAATC 61450
61 L L Q K F K S K Y K I 71