TileCalcGC {TileShuffle} | R Documentation |
Calculates the GC content of probe sequences.
TileCalcGC(probeseq)
probeseq |
A character vector containing the probe sequences. |
Calculates the GC content as sum of the relative numbers of Cs and Gs in the probe sequence. More precisely, the GC content is calculated by frac{G+C}{N} where N is the length of probe sequence while C and G are the number of occurrences of the character C and G in the probe sequence, respectively.
Returns a numeric
vector containing the GC content
(0 <=q GC <=q 1) of each probe sequence in probeseq
.