TileCalcWinTrim2 {TileShuffle} | R Documentation |
Calculates arithmetic average trimmed by the minimal and maximal value on probe scores on windows.
TileCalcWinTrim2(int, win.st, win.len)
int |
A numeric vector containing one or more probe
scores (i.e. intensities or log-fold changes). |
win.st |
An integer vector containing one or more window
start positions in int . |
win.len |
An integer vector containing one or more window
lengths. It must be of same length as win.st . |
Calculates arithmetic average trimmed by the minimal and maximal value on
probe scores on probe scores with given start positions and window lengths.
In case of few but longer windows, this function is superior to
TileCalcWinTrim
which is optimized for short windows.
A numeric
vector
containing the arithmetic mean trimmed
by the minimal and maximal value of the window scores for each
possible start position. Note that windows of length zero are
reported with a window score of NA
. Moreover, probe scores
with the value NA
are excluded from the calculation.