Holds the input motif. More...
#include <structs.h>
Public Attributes | |
char * | name |
int | len |
float ** | freq |
float * | min |
float * | max |
float * | info |
char * | maxC |
Holds the input motif.
gotoh_motif holds the frequency matrix of a motif. Additionally, it stores min, max, information content of the frequency matrix and the consensus character.
float** gotoh_motifSingle::freq |
Frequency table of motif.
float* gotoh_motifSingle::info |
Information content freq
.
Length of motif.
float* gotoh_motifSingle::max |
Maximal values of freq
.
char* gotoh_motifSingle::maxC |
Number of base at max value in freq
. {0
,1,2,3,4} for {A
,C,G,U,-}.
float* gotoh_motifSingle::min |
Minimal values of freq
.
char* gotoh_motifSingle::name |
Name of motif.