Table S19: Summary of single guide box
H/ACA snoRNA families that share a conserved HP2 associated
target. Precise target information such as alignment and
single sequence position, ICI scores, number of detected
interactions and mean minimum free energies are
shown. Experimental verification of target
interactions is shown in the column 'verified'.
| original name |
# sequences |
hairpin |
aln position |
sce position |
conservation |
ICI_sno |
# interactions |
mean mfe |
verified |
snoStrip name |
| Nc_HACA_5 |
20 |
HP1 |
25S-1852 |
25S-862 |
- |
0.56 |
5 |
-36.59 |
- |
HACA_5 |
| HP2 |
18S-1108 |
18S-999 |
14,Sor |
1.07 |
14 |
-24.24 |
+ |
| Nc_HACA_8 |
57 |
HP1 |
18S-335 |
18S-296 |
- |
0.29 |
12 |
-29.72 |
- |
HACA_8 |
| HP2 |
5.8S-18 |
5.8S-17 |
11 |
1.02 |
45 |
-32.44 |
- |
| snR10 |
131 |
HP1 |
25S-4073 |
25S-2854 |
- |
0.34 |
26 |
-33.20 |
- |
HACA_13 |
| HP2 |
U4-46 |
U4-41 |
10,11 |
0.37 |
41 |
-33.98 |
- |
| Nc_HACA_19 |
60 |
HP1 |
18S-1118 |
18S-1009 |
- |
0.31 |
16 |
-29.57 |
- |
HACA_19 |
| HP2 |
25S-2772 |
25S-1687 |
11 |
0.66 |
19 |
-43.57 |
+ |
| HP2 |
25S-2773 |
25S-1688 |
11 |
0.63 |
17 |
-46.02 |
+ |
| HP2 |
U2-26 |
U2-8 |
15 |
0.44 |
23 |
-39.17 |
- |
| snR33 |
12 |
HP1 |
18S-598 |
18S-546 |
- |
0,27 |
3 |
-31.26 |
- |
HACA_24 |
| HP2 |
25S-2050 |
25S-1042 |
Schiz,Sac,Pic |
1.08 |
9 |
-24.82 |
+ |
| snR31 |
5 |
HP1 |
18S-1989 |
18S-1761 |
- |
0,44 |
2 |
-31.01 |
- |
HACA_25 |
| HP2 |
18S-1108 |
18S-999 |
Sacch |
1.15 |
5 |
-29.71 |
+ |
| snR42 |
14 |
HP1 |
U4-35 |
U4-31 |
- |
0.21 |
3 |
-28.65 |
- |
HACA_33 |
| HP2 |
25S-4216 |
25S-2975 |
10 |
0.80 |
10 |
-38.22 |
+ |
| snR86 |
4 |
HP1 |
U1-272 |
U1-256 |
- |
0.76 |
3 |
-32.15 |
- |
HACA_36 |
| HP2 |
25S-3500 |
25S-2314 |
Sacch |
1.12 |
4 |
-22.98 |
+ |
| snR36 |
99 |
HP1 |
U4-31 |
U4-27 |
- |
0,12 |
12 |
-30.63 |
- |
HACA_43 |
| HP2 |
18S-1314 |
18S-1187 |
8 |
0.98 |
72 |
-28.34 |
+ |
| AJ632011 |
3 |
HP1 |
U6-85 |
U6-80 |
- |
0.00 |
1 |
-24.70 |
- |
HACA_47 |
| HP2 |
25S-2060 |
25S-1052 |
Schiz |
1.27 |
2 |
-30.48 |
+ |
| AJ632010 |
48 |
HP1 |
18S-1567 |
18S-1415 |
- |
0.46 |
16 |
-31.72 |
- |
HACA_48 |
| HP2 |
18S-1419 |
18S-1290 |
9,Deb,Met,12,13 |
1.15 |
37 |
-29.23 |
+ |
| AJ632009 |
4 |
HP1 |
25S-3319 |
25S-2137 |
- |
0.70 |
2 |
-24.48 |
- |
HACA_50 |
| HP2 |
U2-137 |
U2-107 |
Schiz |
1.14 |
4 |
-24.08 |
- |