CLUSTAL W (1.83) multiple sequence alignment abe_U3.1_Supercontig_22_155799,1 GTCGACTTTACTTCAAAGAAT-----GTGAGTACACATTTTGCTT aot_U3.1_Supercontig_3_366877,36 GTCGACTTTACTTCAAAGAAT-----GTAAGTATACAGTTTGAAA trb_U3.1_Supercontig_1_3681548,3 GTCGACTTTACTTCAAAGAAT-----GTGAGTACACATTTTGCTT ure_U3.1_Supercontig_2.2_5215779 GTCGACTTTACTTCAAAGAAT-----GTGAGTATACAAATTGTCC cim_U3.1_Supercontig_3.2_123523, GTCGACTCTACTCTAAAGAAT-----GTGAGTATACTGCTCTGCC cps_U3.1_Supercontig_1.2_148282, GTCGACTCTACTCTAAAGAAT-----GTGAGTATACAGCTCTGCC aap_U3.1_Contig1423_987,1250___3 GACGACT-TACTTCTAAGAAT------------------------ aap_U3.2_Contig98_492,743_-_362 GACGACT-TACTTCTAAGAAT------------------------ tac_U3.1_scaffold_13_620149,6204 AGCGACTCTACTTCAAAGAAT------------------------ acp_U3.1_Supercontig_1.15_70553, GTCGACTTTACTTCAA----------GTAAGCAACCCCTTCGTTT pbr_U3.1_Supercontig_1.5_2136912 GTCGACTTTACTTCAA----------GTAAGCTACCCCCCTACAT tau_U3.1_scaffold_16_407464,4077 AGCGACTCTAC---------------GTATGTCTTCCCCTCCCAT and_U3.1_VIII_3287847,3288125___ AGCGACTCTAC---------------GTACGTTATCCTCCCCCCT and_U3.2_V_2435879,2436155_-_398 AGCGACTCTAC---------------GTATGTTCTCCTGGCCCCT ate_U3.1_adopted_1.7_218218,2185 AGCGACTCTAC---------------GTACGTTCTCCTCCCCCCC pfe_U3.1_scaffold_3_238275,23854 AGCGACTCTAC---------------GTATGTGCCTCCCTCCCCA pox_U3.1_scaffold_3_2289090,2289 AGCGACTCTAC---------------GTATGTGTTTCCCACCCCA pox_U3.2_scaffold_7_3986094,3986 AGCGACTCTAC---------------GTATGTGTTTCCCACCCCC pbe_U3.1_scaffold_2_1732113,1732 AGCGACTCTAC---------------GTATGTTCAATCCACCCCA pbe_U3.2_scaffold_1_1600465,1600 AGCGACTCTAC---------------GTTAGTGATCCCTCCCCCC pex_U3.1_scaffold_7_908590,90886 AGCGACTCTAC---------------GTGCGTTCTCCTCCCCCTA pla_U3.2_scaffold_8_54412,54659_ AGCGACTCTAC---------------GTATGTTCCCCCTCCCCCA pla_U3.1_scaffold_2_1960338,1960 AGCGACTCTAC---------------GTATGTTCTCCTCCCCCCC pcy_U3.1_scaffold_4_924484,92475 AGCGACTCTAC---------------GTACGTTCTCCTCCCCCCC pex_U3.2_scaffold_1_6960432,6960 AGCGACTCTAC---------------GTATGTTCTCCCCCCCCCC pcy_U3.2_scaffold_4_2922612,2922 AGCGACTCTAC---------------GTATGTTCTCCATCCCCCA afl_U3.1_EQ963481_1382473,138275 AGCGACTCTAC---------------GTAAGTTCATCCCCTCCCT aor_U3.1_II_1362245,1362527___40 AGCGACTCTAC---------------GTAAGTTCATCCCCTCCCT afl_U3.2_EQ963475_1122270,112255 AGCGACTCTAC---------------GTAAGTTCCTCCCCTCCCT aor_U3.2_III_1106474,1106756_-_4 AGCGACTCTAC---------------GTAAGTTCCTCCCCTCCCT ani_U3.1_III_2090761,2091056_-_4 AGCGACTCTAC---------------GTTAGTTTCCCTACCCCCT ani_U3.2_II_3746131,3746426_-_42 AGCGACTCTAC---------------GTTAGTCTCCCCTCCCCCC acl_U3.1_adopted_368_1726981,172 AGCGACTCTAC---------------GTGAGTGATCCCCCTCCCT afu_U3.1_VI_2847001,2847303___43 AGCGACTCTAC---------------GTATGTCATCCCCCTCCCT nfi_U3.1_adopted_9201_2962614,29 AGCGACTCTAC---------------GTATGTTCTCCCCCTCCCT abe_U3.1_Supercontig_22_155799,1 TCCACCACACGATGTCACCCTCTGGCTTGACACGTTGATGTTCAT aot_U3.1_Supercontig_3_366877,36 TCCCAGGCACAGCCGCGTGCCTTTTGACGATGACAGCAAATAACT trb_U3.1_Supercontig_1_3681548,3 TCCACCACACCATGTCGCCCTCTATGGTCGACATGTTGATGTTCA ure_U3.1_Supercontig_2.2_5215779 ACTCCTATCGCTTGGCTTGGGCTGACCAACTCTTCCAACAG---- cim_U3.1_Supercontig_3.2_123523, TTTTTGTCATGATGCTTCGTCACGGCCCATACTGACTTTCTTCAC cps_U3.1_Supercontig_1.2_148282, TTTTTGTCATGATGCTTCGTTACGGCCCATACTGACTTCCTTCAC aap_U3.1_Contig1423_987,1250___3 --------------------------------------------- aap_U3.2_Contig98_492,743_-_362 --------------------------------------------- tac_U3.1_scaffold_13_620149,6204 --------------------------------------------- acp_U3.1_Supercontig_1.15_70553, GTTCAATTTTCCGGACCTGCCCTGTAAAATGGCACTGTTGCTAAT pbr_U3.1_Supercontig_1.5_2136912 GCAGTCTATCCCCAACCCCACAACCCCTCATGCCTCATCTTTCAT tau_U3.1_scaffold_16_407464,4077 ATCCTCTGGTCTCCCCTCTCAATCGAGCGTGATGTGCTGACTCTG and_U3.1_VIII_3287847,3288125___ ACATTGGGAATATTCACCCTTGGGAGAATACTCTGCTAACTGCCT and_U3.2_V_2435879,2436155_-_398 ACCTACATTAGGGATTCCCTCTCTTCACTCGAGCATCTGCTAACC ate_U3.1_adopted_1.7_218218,2185 TACCTTTGGGATCATCCTCCCTCTGGTTTCTCTGAAGAATGTCAC pfe_U3.1_scaffold_3_238275,23854 TACACTTGGGAAACCCCCTTGAACATTTGCTAACGGCGTTTCTCC pox_U3.1_scaffold_3_2289090,2289 TACAGTGCGAATCTCACACTGCTTTGCATCACTTACTGACTTGTC pox_U3.2_scaffold_7_3986094,3986 CAACAGTGCGAATGTCAAACTGTCACTGGATCTTTTACTGACTTG pbe_U3.1_scaffold_2_1732113,1732 TACTGTGAAACCAACAATTACTGACCATTTCCAACAG-------- pbe_U3.2_scaffold_1_1600465,1600 AAGCTTTGCCTTGTCTTCGGACTCGCGGCAACTTGGAGTCTTTTG pex_U3.1_scaffold_7_908590,90886 ACAGTTGGAAACCTTCTGGGTTTTCAATCTGGACTTTGGGCATTT pla_U3.2_scaffold_8_54412,54659_ TACAGTGGAAAAATACCACAAGACTGTCCGAACATTTTACTGACC pla_U3.1_scaffold_2_1960338,1960 CCAACAGTTGGAACCTCCAGGGTTTCGACATTGGGCTTTGGCATT pcy_U3.1_scaffold_4_924484,92475 AACAGTTGGAAACCTTCTGGGTTTTCACATTGGACTTTGGCATTT pex_U3.2_scaffold_1_6960432,6960 CTACAGTTGAAAATACATCAATCACTGTATTGGAACATGTTACTG pcy_U3.2_scaffold_4_2922612,2922 TACAGTGGAAAACATCACTGTTCCTGAACATTTCACTGACCATTC afl_U3.1_EQ963481_1382473,138275 ACCTTGGGAATATCAGGACAAATTCAAACACCCAGAATGACTGCT aor_U3.1_II_1362245,1362527___40 ACCTTGGGAATATCAGGACAAATTCAAACACCCAGAATGACTGCT afl_U3.2_EQ963475_1122270,112255 ACATTTGGGAACCCCAGAACAAAGCAATGAGCCAAACAAAGAATG aor_U3.2_III_1106474,1106756_-_4 ACATTTGGGAACCCCAGAACAAAGCAATGAGCCAAACAAAGAATG ani_U3.1_III_2090761,2091056_-_4 ACATTGGGCTTCAGAATCATTTGCTAACCACCTTTTTGCCTACAG ani_U3.2_II_3746131,3746426_-_42 TACATTTGGGAAGAGCCTTTCAGCCTTCCCAAATGATGCACTTTG acl_U3.1_adopted_368_1726981,172 ACCTTGGGAATCACCTCCCAAACCAAACACTGCAATGAATCCTTT afu_U3.1_VI_2847001,2847303___43 ACCTTTGGGAAAACCTCTCAACTGCAAGTCAGAACATTTTGCTAA nfi_U3.1_adopted_9201_2962614,29 ACCTTTGGGAAAACCTCTCAACTGCGAGTCAAAACATTTGCTAAC abe_U3.1_Supercontig_22_155799,1 GATGATGATAACTAACTGTTCTCTTTCCAACAG------------ aot_U3.1_Supercontig_3_366877,36 AACTTATCCTTCCAATAG--------------------------- trb_U3.1_Supercontig_1_3681548,3 CGAGATGATGATAACTAACTTTTCTCTTTCCAACAG--------- ure_U3.1_Supercontig_2.2_5215779 --------------------------------------------- cim_U3.1_Supercontig_3.2_123523, AG------------------------------------------- cps_U3.1_Supercontig_1.2_148282, AG------------------------------------------- aap_U3.1_Contig1423_987,1250___3 --------------------------------------------- aap_U3.2_Contig98_492,743_-_362 --------------------------------------------- tac_U3.1_scaffold_13_620149,6204 --------------------------------------------- acp_U3.1_Supercontig_1.15_70553, CCACCCATCTACAG------------------------------- pbr_U3.1_Supercontig_1.5_2136912 CCTTCATCCTCAGAATTTGCAGTCCGGCCTCGAACATCCAATGCT tau_U3.1_scaffold_16_407464,4077 CCACAG--------------------------------------- and_U3.1_VIII_3287847,3288125___ TCTACAG-------------------------------------- and_U3.2_V_2435879,2436155_-_398 GTCTTATGTGCAG-------------------------------- ate_U3.1_adopted_1.7_218218,2185 TAACAACCTCCCAG------------------------------- pfe_U3.1_scaffold_3_238275,23854 TACAG---------------------------------------- pox_U3.1_scaffold_3_2289090,2289 TTTCTCCTACAG--------------------------------- pox_U3.2_scaffold_7_3986094,3986 ACTTCTCCCTACAG------------------------------- pbe_U3.1_scaffold_2_1732113,1732 --------------------------------------------- pbe_U3.2_scaffold_1_1600465,1600 ACTTGAATGTTTTACTGACCATTTCCAACAG-------------- pex_U3.1_scaffold_7_908590,90886 TGAACATTTCCACTGACTTTTCTTCCTCTGCAG------------ pla_U3.2_scaffold_8_54412,54659_ ATTTCCACAG----------------------------------- pla_U3.1_scaffold_2_1960338,1960 TTGAACTTTCCACTGACTTTTTTTTTCCCACAG------------ pcy_U3.1_scaffold_4_924484,92475 TGAACTTATTCACTGACTTTTTTCCTCCCACAG------------ pex_U3.2_scaffold_1_6960432,6960 ACCATTTCCACAG-------------------------------- pcy_U3.2_scaffold_4_2922612,2922 CCACAG--------------------------------------- afl_U3.1_EQ963481_1382473,138275 AACATTTTTACCTACAG---------------------------- aor_U3.1_II_1362245,1362527___40 AACATTTTTACCTACAG---------------------------- afl_U3.2_EQ963475_1122270,112255 ATTGCTAACCTGCTTGCCTACAG---------------------- aor_U3.2_III_1106474,1106756_-_4 ATTGCTAACCTGCTTGCCTACAG---------------------- ani_U3.1_III_2090761,2091056_-_4 --------------------------------------------- ani_U3.2_II_3746131,3746426_-_42 GAGAATCATCAGCTAACCACTTTCTGCCTACAG------------ acl_U3.1_adopted_368_1726981,172 TGCTAACAACTGCCACAG--------------------------- afu_U3.1_VI_2847001,2847303___43 CAGCTTTACTACAG------------------------------- nfi_U3.1_adopted_9201_2962614,29 AGCTCTGCCACAG-------------------------------- abe_U3.1_Supercontig_22_155799,1 ---------------------------------------CATTTC aot_U3.1_Supercontig_3_366877,36 ---------------------------------------CATTTC trb_U3.1_Supercontig_1_3681548,3 ---------------------------------------CATTTC ure_U3.1_Supercontig_2.2_5215779 ---------------------------------------CATTTC cim_U3.1_Supercontig_3.2_123523, ---------------------------------------CATTTC cps_U3.1_Supercontig_1.2_148282, ---------------------------------------CATTTC aap_U3.1_Contig1423_987,1250___3 ---------------------------------------CATTTC aap_U3.2_Contig98_492,743_-_362 ---------------------------------------CATTTC tac_U3.1_scaffold_13_620149,6204 ---------------------------------------CACTTC acp_U3.1_Supercontig_1.15_70553, ----------------------------------AGAATCATTTC pbr_U3.1_Supercontig_1.5_2136912 AATGCATGAATCCCTTCAACAACAG---------AGAATCATTTC tau_U3.1_scaffold_16_407464,4077 -----------------------------TTCAAAGAATCAATTC and_U3.1_VIII_3287847,3288125___ -----------------------------TTCAAAGAATCACTT- and_U3.2_V_2435879,2436155_-_398 -----------------------------TTCAAAGAATCACTT- ate_U3.1_adopted_1.7_218218,2185 -----------------------------TTCAAAGAATCACTT- pfe_U3.1_scaffold_3_238275,23854 -----------------------------TTCAAAGAATCACTT- pox_U3.1_scaffold_3_2289090,2289 -----------------------------TTCAAAGAATCACTT- pox_U3.2_scaffold_7_3986094,3986 -----------------------------TTCAAAGAATCACTT- pbe_U3.1_scaffold_2_1732113,1732 -----------------------------TTCAAAGAATCACTT- pbe_U3.2_scaffold_1_1600465,1600 -----------------------------TTCAAAGAATCACTT- pex_U3.1_scaffold_7_908590,90886 -----------------------------TTCAAAGAATCACTT- pla_U3.2_scaffold_8_54412,54659_ -----------------------------TTCAAAGAATCACTT- pla_U3.1_scaffold_2_1960338,1960 -----------------------------TTCAAAGAATCACTT- pcy_U3.1_scaffold_4_924484,92475 -----------------------------TTCAAAGAATCACTT- pex_U3.2_scaffold_1_6960432,6960 -----------------------------TTCAAAGAATCACTT- pcy_U3.2_scaffold_4_2922612,2922 -----------------------------TTCAAAGAATCACTT- afl_U3.1_EQ963481_1382473,138275 -----------------------------TTCAAAGAATCACTT- aor_U3.1_II_1362245,1362527___40 -----------------------------TTCAAAGAATCACTT- afl_U3.2_EQ963475_1122270,112255 -----------------------------TTCAAAGAATCACTT- aor_U3.2_III_1106474,1106756_-_4 -----------------------------TTCAAAGAATCACTT- ani_U3.1_III_2090761,2091056_-_4 -----------------------------TTCAAAGAATCACTT- ani_U3.2_II_3746131,3746426_-_42 -----------------------------TTCAAAGAATCACTT- acl_U3.1_adopted_368_1726981,172 -----------------------------TTCAAAGAATCACTT- afu_U3.1_VI_2847001,2847303___43 -----------------------------TTCAAAGAATCACTT- nfi_U3.1_adopted_9201_2962614,29 -----------------------------TTCAAAGAATCACTT- abe_U3.1_Supercontig_22_155799,1 TATAGTAAA-CGACCCTACTCTGTAGTTTTTACGAAAGCGACAAG aot_U3.1_Supercontig_3_366877,36 TATAGTAAA-CGACCCTACTCTGTAGTTTTTACGAAAGCGACATG trb_U3.1_Supercontig_1_3681548,3 TATAGTAAA-CGACCCTACTCTGTAGTTTTTACGAAAGCGACAAG ure_U3.1_Supercontig_2.2_5215779 TTCAGTAGT-CGTCCCAC-TCTGTATTTCGTACTAGAGGGGTAAA cim_U3.1_Supercontig_3.2_123523, TTCAGTAGA-CGTCCCAC-TCTGTATTTCTTATTACAGGGGTAAA cps_U3.1_Supercontig_1.2_148282, TTCAGTAGA-CGTCCCAC-TCTGTATTTCTTATTACAGGGGTAAA aap_U3.1_Contig1423_987,1250___3 TATAGTATA-CGTCTC-CTTCTGATTTTTTCGCTTTAGCGACAGA aap_U3.2_Contig98_492,743_-_362 TATAGTAAA-CGTCTC-CTTCTGATTTTTTCGCTTTAGCGACAGA tac_U3.1_scaffold_13_620149,6204 ATTAGTAGA-CGTCTT-CCGCTGTTTTTTCGAAAATAGCCACATA acp_U3.1_Supercontig_1.15_70553, TATAGTAAATCGTCCCAC--CTGATTTTTTCGCATTAGCGACTGA pbr_U3.1_Supercontig_1.5_2136912 TATAGTAAATCGTCCCAC--CTGATTTTTTCGCACTAGCGACTGA tau_U3.1_scaffold_16_407464,4077 TATAGTAGA-CGCATCCCAACTGGTTTTCCAAACC-AGCCACAGA and_U3.1_VIII_3287847,3288125___ TAGAGTAGA-CGTCCCTCAT-TGAGCTCATCTAATGAGCCAC--A and_U3.2_V_2435879,2436155_-_398 TAGAGTAGA-CGTCCCTCAT-TGAGCTCATCTAATGAGCCAC--A ate_U3.1_adopted_1.7_218218,2185 TAGAGTAGA-CGTCTCTCAT-TGAGCTTTTCTAAAAAGCCACAGA pfe_U3.1_scaffold_3_238275,23854 TAGAGTAGA-CGTCCCACTTCTAAGCTCTTTAAAAGAGCCACAGA pox_U3.1_scaffold_3_2289090,2289 TAGAGTAGA-CGTCCCACTTCTAAGCTCTTTAAACGAGCCACAGA pox_U3.2_scaffold_7_3986094,3986 TAGAGTAGA-CGTCCCACTTCTAAGCTCTTTAAACGAGCCACAGA pbe_U3.1_scaffold_2_1732113,1732 TAGAGTAGA-CGTCTCCTTTCTAAGCTCTTTAAAAGAGCCACAGA pbe_U3.2_scaffold_1_1600465,1600 TAGAGTAGA-CGTCTCCTTTCTAAGCTCTTTAAAAGAGCCACAGA pex_U3.1_scaffold_7_908590,90886 TAGAGTAGA-CGTCCCCTTTCTAAACTCTTTAAAAGAGCCACAGA pla_U3.2_scaffold_8_54412,54659_ TAGAGTAGA-CGTCCTCTTTCTAAACTCTTTAAAAGAGCCACAGA pla_U3.1_scaffold_2_1960338,1960 TAGAGTAGA-CGTCCCCTTTCTAAGCTCTTTAAAAGAGCCACAGA pcy_U3.1_scaffold_4_924484,92475 TAGAGTAGA-CGTCCCCTTTCTAAACTCTTTAAAAGAGCCACAGA pex_U3.2_scaffold_1_6960432,6960 TAGAGTAGA-CGTCCCCTTTCTAAACTCTTTAAAAGAGCCACAGA pcy_U3.2_scaffold_4_2922612,2922 TAGAGTAGA-CGTCCCCTTTCTAAACTCTTTAAAAGAGCCACAGA afl_U3.1_EQ963481_1382473,138275 TAGAGTAGA-CGTCCCACCTCTGAACTCTTCTAAAGAGCTACAGA aor_U3.1_II_1362245,1362527___40 TAGAGTAGA-CGTCCCACCTCTGAACTCTTCTAAAGAGCTACAGA afl_U3.2_EQ963475_1122270,112255 TAGAGTAGA-CGTCCCACCTCTGAACTCTTCTAAAGAGCTACAGA aor_U3.2_III_1106474,1106756_-_4 TAGAGTAGA-CGTCCCACCTCTGAACTCTTCTAAAGAGCTACAGA ani_U3.1_III_2090761,2091056_-_4 TAGAGTAGA-CGTCCCACCTCTGAGCTCTTCTAAAGAGCCACAGA ani_U3.2_II_3746131,3746426_-_42 TAGAGTAGA-CGTCCCACCTCTGAGCTCTTCTAAAGAGCCACAGA acl_U3.1_adopted_368_1726981,172 TAGAGTAGA-CGTCCCACCTCTGAGCTCTTCTAAAGAGCCACAGA afu_U3.1_VI_2847001,2847303___43 TAGAGTAGA-CGTCCCACCTCTGAGCTCTTCTAAAGAGCCACAGA nfi_U3.1_adopted_9201_2962614,29 TAGAGTAGA-CGTCCCACCTCTGAGCTCTTCTAAAGAGCCACAGA abe_U3.1_Supercontig_22_155799,1 AGTCCCAACCTTGCTGATGACCCTAATGTCCTCGATGCCCTAAAG aot_U3.1_Supercontig_3_366877,36 AGTCCCAACCTTGCTGATGACCCTTATGTCCTCGATACCCTAAAG trb_U3.1_Supercontig_1_3681548,3 AGTCCCAACCTTGCTGATGACCCTAATGTCCTCGATGCCCTAAAG ure_U3.1_Supercontig_2.2_5215779 TTCTCAATCC-TGCTGATGACCACCATGCCCTCGATGCCCTAAAG cim_U3.1_Supercontig_3.2_123523, --CTTCAATCCTGCTGATGACCACCATGTCCTCGATGCCCTAAAG cps_U3.1_Supercontig_1.2_148282, --CTTCAATCCTGCTGATGACCACCATGTCCTCGATGCCCTAAAG aap_U3.1_Contig1423_987,1250___3 ATCCCCACTCTTGCGGATGACC-TTATGTCCAGTATGCCCTAAAG aap_U3.2_Contig98_492,743_-_362 ATCCCCACTCTTGCGGATGACC-TTATGTCTTCGACGCCCTAAAG tac_U3.1_scaffold_13_620149,6204 --TCCCACCCTTGCTGATGACCTTCATGTCCTCGATACCCCAAAG acp_U3.1_Supercontig_1.15_70553, ATCCCCAACCTTGCTGATGACCACCATGTCCACAGTGCCCTAGAG pbr_U3.1_Supercontig_1.5_2136912 ATCCCCAACCTTGCTGATGACCACCATGTCCCCAGCGCCCTAGAG tau_U3.1_scaffold_16_407464,4077 ATCTCCAACCTTGCTGATGACCTCGAGGTCCTCGATGCCCTAAAG and_U3.1_VIII_3287847,3288125___ CCCCCAACCCTTGCTGATGACTTCTATGTCCTCGATGCCCTAAAG and_U3.2_V_2435879,2436155_-_398 CCCCCAACCCTTGCTGATGACTTCTATGTCCTCGATGCCCTAAAG ate_U3.1_adopted_1.7_218218,2185 ATCTCCACCCTTGCTGATGACTGCTATGTCCTCGATGCCCTAAAG pfe_U3.1_scaffold_3_238275,23854 ATCTCCACCCTTGCTGATGACTGCTATGTCCTCGATGCCCTAAAG pox_U3.1_scaffold_3_2289090,2289 ATCTTCACCCTTGCTGATGACTGCTATGTCCTCGATGCCCTAAAG pox_U3.2_scaffold_7_3986094,3986 ATCTTCACCCTTGCTGATGACTGCTATGTCCTCGATGCCCTAAAG pbe_U3.1_scaffold_2_1732113,1732 ATCTCCACCCTTGCTGATGACTGC-ATGTCCTCGGTGCCCTAAAG pbe_U3.2_scaffold_1_1600465,1600 ATCTCCACCCTTGCTGATGACTGC-ATGTCCTCGATGCCCTAAAG pex_U3.1_scaffold_7_908590,90886 ATCTCCACCCTTGCTGATGACTAC-ATGTCCTCGATGCCCTAAAG pla_U3.2_scaffold_8_54412,54659_ ATCTCCACCCTTGCTGATGACTA-TATGTCCTCGATGCCCTAAAG pla_U3.1_scaffold_2_1960338,1960 ATCTCCACCCTTGCTGATGACTAC-ATGTCCTCGATGCCCTAAAG pcy_U3.1_scaffold_4_924484,92475 ATCTCCACCCTTGCTGATGACTAC-ATGTCCTCGATGCCCTAAAG pex_U3.2_scaffold_1_6960432,6960 ATCTCCACCCTTGCTGATGACTAC-ATGTCCTCGACGCCCTAAAG pcy_U3.2_scaffold_4_2922612,2922 ATCTCCACCCTTGCTGATGACTAC-ATGTCCTCGATGCCCTAAAG afl_U3.1_EQ963481_1382473,138275 ATCTCCACCCTTGCTGATGACTTCCATGTCCTCAATGCCCTAAAG aor_U3.1_II_1362245,1362527___40 ATCTCCACCCTTGCTGATGACTTCCATGTCCTCAATGCCCTAAAG afl_U3.2_EQ963475_1122270,112255 ATCTCCACCCTTGCTGATGACTTCTATGTCCTCAATGCCCTAAAG aor_U3.2_III_1106474,1106756_-_4 ATCTCCACCCTTGCTGATGACTTCTATGTCCTCAATGCCCTAAAG ani_U3.1_III_2090761,2091056_-_4 ATCTCCACCCTTGCTGATGACTGCTATGTCCTCGATGCCCTAAAG ani_U3.2_II_3746131,3746426_-_42 ATCTCCACCCTTGCTGATGACTGCTATGTCCTCGATGCCCTAAAG acl_U3.1_adopted_368_1726981,172 ATCTCCACCCTTGCTGATGACTGCTATGTCCTCGATGCCCTAAAG afu_U3.1_VI_2847001,2847303___43 ATCTCCACCCTTGCTGATGACTGCTATGTCCTCGATGCCCTAAAG nfi_U3.1_adopted_9201_2962614,29 ATCTCCACCCTTGCTGATGACTGCTATGTCCTCGATACCCTAAAG abe_U3.1_Supercontig_22_155799,1 TGAAG-------------------------------CCTTTTT-T aot_U3.1_Supercontig_3_366877,36 TGAAG-------------------------------CCTTTTTTT trb_U3.1_Supercontig_1_3681548,3 TGAAG-------------------------------CCTTTTT-T ure_U3.1_Supercontig_2.2_5215779 TGAAG-------------------------------CCGTGA--T cim_U3.1_Supercontig_3.2_123523, TGAAG-------------------------------CCGTTA--T cps_U3.1_Supercontig_1.2_148282, TGAAG-------------------------------CCGTTA--T aap_U3.1_Contig1423_987,1250___3 TGAAA-------------------------------CCGTG---T aap_U3.2_Contig98_492,743_-_362 TGAAG-------------------------------CCGATGTTT tac_U3.1_scaffold_13_620149,6204 TGAAATTTTGTGGCATTCTGTTTTTTAGCAGTTTGTCCGTT---T acp_U3.1_Supercontig_1.15_70553, TGAAA-------------------------------CC-TGTTAT pbr_U3.1_Supercontig_1.5_2136912 TGAAG-------------------------------CCTTTTTAT tau_U3.1_scaffold_16_407464,4077 TGAAGCTGCCCTCTGGG--------------------C-TGTG-T and_U3.1_VIII_3287847,3288125___ TGAAG-------------------------------CCGTGTT-T and_U3.2_V_2435879,2436155_-_398 TGAAA-------------------------------CCGTGTT-T ate_U3.1_adopted_1.7_218218,2185 TGAAG-------------------------------CCGTGTT-T pfe_U3.1_scaffold_3_238275,23854 TGAAG-------------------------------CCTTTT--G pox_U3.1_scaffold_3_2289090,2289 TGAAA-------------------------------CCGTTTG-G pox_U3.2_scaffold_7_3986094,3986 TGAAA-------------------------------CCGTTTG-G pbe_U3.1_scaffold_2_1732113,1732 TGAAA-------------------------------CCTTTT--T pbe_U3.2_scaffold_1_1600465,1600 TGAAA-------------------------------CCTTCT--T pex_U3.1_scaffold_7_908590,90886 TGAAA-------------------------------CCTTTT--T pla_U3.2_scaffold_8_54412,54659_ TGAAA-------------------------------CCTTTT--T pla_U3.1_scaffold_2_1960338,1960 TGAAA-------------------------------CCTTTT--T pcy_U3.1_scaffold_4_924484,92475 TGAAA-------------------------------CCTTTT--T pex_U3.2_scaffold_1_6960432,6960 TGAAA-------------------------------CCTTTT--T pcy_U3.2_scaffold_4_2922612,2922 TGAAA-------------------------------CCTTTT--T afl_U3.1_EQ963481_1382473,138275 TGAAG-------------------------------CCGTGTT-T aor_U3.1_II_1362245,1362527___40 TGAAG-------------------------------CCGTGTT-T afl_U3.2_EQ963475_1122270,112255 TGAAG-------------------------------CCGTGTT-T aor_U3.2_III_1106474,1106756_-_4 TGAAG-------------------------------CCGTGTT-T ani_U3.1_III_2090761,2091056_-_4 TGAAG-------------------------------CCGTT-T-T ani_U3.2_II_3746131,3746426_-_42 TGAAG-------------------------------CCGTT-T-T acl_U3.1_adopted_368_1726981,172 TGAAG-------------------------------CCGTTCT-T afu_U3.1_VI_2847001,2847303___43 TGAAG-------------------------------CCGTTCT-T nfi_U3.1_adopted_9201_2962614,29 TGAAG-------------------------------CCGTTCT-T abe_U3.1_Supercontig_22_155799,1 ACTCTCGCCTATACTTCGACAGTGATGATGAT-----ACTTGACA aot_U3.1_Supercontig_3_366877,36 ACTCTCGTTTATATTTCGGCAGACTTGATGAT-----ACATGATT trb_U3.1_Supercontig_1_3681548,3 ATTCTCGCCTATACTTCGACAGTGATGATGAT-----ACTTGACA ure_U3.1_Supercontig_2.2_5215779 ACTCCCGCCTCGACCCTGCCCGAGATACTATCGCGTTCTCTGGAG cim_U3.1_Supercontig_3.2_123523, ACTCCCGCCTCGACCCTGCTCGAGATCGCCCT-CGCGTTTTCTGG cps_U3.1_Supercontig_1.2_148282, ACTCCCGCCTCGACCCTGCTCGAGATCGCCCT-CGCGTTTTCTGG aap_U3.1_Contig1423_987,1250___3 GTTCCCGCCTCGAC--------------------------TTCGA aap_U3.2_Contig98_492,743_-_362 ACTTCC--------------------------------------- tac_U3.1_scaffold_13_620149,6204 ACTCCCGCCTCGA-------------------------------- acp_U3.1_Supercontig_1.15_70553, ACTCTCGTCCGCATCGCTACGGGTTATATGATGCTGGAGGCTTCG pbr_U3.1_Supercontig_1.5_2136912 ACTCCCGCCTCGAT------------------------------- tau_U3.1_scaffold_16_407464,4077 ACTCCCGCCTCGA----------------CCGCGCGAGTCTTCGG and_U3.1_VIII_3287847,3288125___ ACTCCCGCCTCGACCTTGTC-----------------TTCTCCGG and_U3.2_V_2435879,2436155_-_398 ATTCCCGCCTCGACCTTGTC-----------------TTTCACGA ate_U3.1_adopted_1.7_218218,2185 ACTTCCGCCGCGACCGCGTC--------CGTT-TCCGCATCTTGA pfe_U3.1_scaffold_3_238275,23854 ACTCCCGCCTCGAC------------------------------- pox_U3.1_scaffold_3_2289090,2289 ACTTCCGATTCGAC------------------------------- pox_U3.2_scaffold_7_3986094,3986 ACTTCCGATTCGAC-----------------------------TG pbe_U3.1_scaffold_2_1732113,1732 ACTTCCGCCTCGAC------------------------------- pbe_U3.2_scaffold_1_1600465,1600 ACTTCCGCCTCGAC------------------------------- pex_U3.1_scaffold_7_908590,90886 ACTCCCGCCTCGAC------------------------------- pla_U3.2_scaffold_8_54412,54659_ ACTCCCGCTTCGAC------------------------------- pla_U3.1_scaffold_2_1960338,1960 ACTCCCGCCTCGAC------------------------------- pcy_U3.1_scaffold_4_924484,92475 ACTCCCGCCTCGAC------------------------------- pex_U3.2_scaffold_1_6960432,6960 ACTCCCGCCTCGAC------------------------------- pcy_U3.2_scaffold_4_2922612,2922 ACTTCCGCCTCGAC------------------------------- afl_U3.1_EQ963481_1382473,138275 ACTTCCGCCTCGAT---------------AGC-TGGTATCTGCGA aor_U3.1_II_1362245,1362527___40 ACTTCCGCCTCGATAGC----------------TGGTATCTGCGA afl_U3.2_EQ963475_1122270,112255 ACTTCCGTCTCGAC---------------GGT-TGGTATCTGCGA aor_U3.2_III_1106474,1106756_-_4 ACTTCCGCCTCGAC---------------GGT-TGGTATCTGCGA ani_U3.1_III_2090761,2091056_-_4 ACTTCCGACTCGACCTTG----------CATT-TGCACGCTCTGT ani_U3.2_II_3746131,3746426_-_42 ACTTCCGACTCGACCTTG----------CATT-TGCACGCTCTGT acl_U3.1_adopted_368_1726981,172 ACTCCCGCCTCGACCCCGCG-------GCGCT-CCGACGCTCACA afu_U3.1_VI_2847001,2847303___43 ACTCCCGATTCGACCTTGCT-------TCGTT-CCGACGCTCTGA nfi_U3.1_adopted_9201_2962614,29 ACTCCCGACTCGACCTTGCT-------TCGTT-CCGACGCTCTGA abe_U3.1_Supercontig_22_155799,1 ATGCTTCGGTGTTTGATTGAATCTCATCCTG-------------- aot_U3.1_Supercontig_3_366877,36 ACGCTTCGGCGTTTGATTGTATCTCATCCTG-------------- trb_U3.1_Supercontig_1_3681548,3 ATGCCTCGGTGTTTGATTGAATCTCATCCTG-------------- ure_U3.1_Supercontig_2.2_5215779 ACCTTACAGTCTCTG----AAGCGTGTGTGCATTCTTG------- cim_U3.1_Supercontig_3.2_123523, ATACCCTCTGTGGCTTCCGAAGTGCGGGCGGATGCATCTCGGGCT cps_U3.1_Supercontig_1.2_148282, ATACCCTCTATGGCTTCCGAAGCGCGGGCGGATGCATC----TCG aap_U3.1_Contig1423_987,1250___3 TCAGATCTG----------GATTCTGTCCGGGTTCTGTC------ aap_U3.2_Contig98_492,743_-_362 -------TGTGCTCCTGCAGTTCTCTTTTTGAG------------ tac_U3.1_scaffold_13_620149,6204 --GATTGTGTT--------AAGCTTCTTGTTGTCCTCACGGATAT acp_U3.1_Supercontig_1.15_70553, GCCAC--TGTTTCGT----ATACTTGTC----------------- pbr_U3.1_Supercontig_1.5_2136912 -------TGCTTCGGTCACCGATTTCGTGTGTCTGCT-------- tau_U3.1_scaffold_16_407464,4077 GACATTGTGTTACGACCCTCCGCAAGGGGGGATTGTGACCGGGTC and_U3.1_VIII_3287847,3288125___ TACAAACTGCTTTGGC---GGGCTTGTTCCGAGT----------- and_U3.2_V_2435879,2436155_-_398 ACGAAC-TGCTTCGAC---ATGCTCGTTTCGAGT----------- ate_U3.1_adopted_1.7_218218,2185 TACGCCTTGTCTTCGGAC-GAGCGTGTGTCGGGTGTCT----GGG pfe_U3.1_scaffold_3_238275,23854 -------TATTACG-----CGTCCTGCTTGCAGGGTC-------- pox_U3.1_scaffold_3_2289090,2289 -------TGAC--------ACGCGTGCTTCGGCGTCTGTGTG--- pox_U3.2_scaffold_7_3986094,3986 ACACGCGTGCTTCG-----GCGTCTGTGTG--------------- pbe_U3.1_scaffold_2_1732113,1732 -------TGTCACGC----GTGCTGTTTACAGTGTCTGTGTT--- pbe_U3.2_scaffold_1_1600465,1600 -------TGTCACGC----GTGCTGTTCGCAGTGTCTGTGTT--- pex_U3.1_scaffold_7_908590,90886 -------TGTCACGC----GTGCTGTCCGCAGTGTCTGTGTT--- pla_U3.2_scaffold_8_54412,54659_ -------TGTCACGC----GTGCTGTTCGCAGTGTCTGTGTT--- pla_U3.1_scaffold_2_1960338,1960 -------TGTCACGC----GTGCTGTTTGCAGTGTCTGTGTT--- pcy_U3.1_scaffold_4_924484,92475 -------TGTCACGC----GTGCTGTCCGCAGTGTCTGTGTT--- pex_U3.2_scaffold_1_6960432,6960 -------TGTCACGC----GTGCTGTCCGCAGTGTCTGTGTT--- pcy_U3.2_scaffold_4_2922612,2922 -------TGTCACGC----GTGCTGTTCGCAGTGTCTGTGTT--- afl_U3.1_EQ963481_1382473,138275 ACGACT-TGCTTCGGT---GAGCTTGTTCGAGTGCCT-------- aor_U3.1_II_1362245,1362527___40 ACGACT-TGCTTCGGT---GAGCTTGTTCGAGTGCCT-------- afl_U3.2_EQ963475_1122270,112255 ACGACT-CGCTTCGGT---GAGCTTGTTCGAGTGCCT-------- aor_U3.2_III_1106474,1106756_-_4 ACGACT-CGCTTCGGT---GAGCTTGTTCGAGTGCCT-------- ani_U3.1_III_2090761,2091056_-_4 TACAATCTGTTTTCGGAT-AGACTTGTTTCGGGTGTCG----G-- ani_U3.2_II_3746131,3746426_-_42 TACAATCTGTCTTCGGAT-GGACTTGTTTCGGGTGTCG----G-- acl_U3.1_adopted_368_1726981,172 ACGATTCTGTCGCAAGACGGAGTCTGTTTGGGCTGTTG----GTT afu_U3.1_VI_2847001,2847303___43 ACGACT-TGTTGCAAAAC-AAGCTTGTTCGGGCTGTTG----GAT nfi_U3.1_adopted_9201_2962614,29 ACGACT-TGTTGCAAAAC-GAGCTTGTTCGGGCTGTTG----GAG abe_U3.1_Supercontig_22_155799,1 ---------------TTGATTTAGAGAGTGGTGATGATCTTTACC aot_U3.1_Supercontig_3_366877,36 ---------------TTGATCTAGAGAGTGGTGATGATCTTGACC trb_U3.1_Supercontig_1_3681548,3 ---------------TTGATTTAGAGAGTGGTGATGATCTTTACC ure_U3.1_Supercontig_2.2_5215779 ------------GGCAATGTCCAGGGAGTGGTGATGATCTTGACC cim_U3.1_Supercontig_3.2_123523, AC-------T-----TGGGTCTAGGGAGTGGTGATGATCTTGACC cps_U3.1_Supercontig_1.2_148282, GG-------CTATC-TGGGTCCAGGGAGTGGTGATGATCTTGACC aap_U3.1_Contig1423_987,1250___3 ---------------GCTGTCCAGGGAATGGTGATGATCTTGACC aap_U3.2_Contig98_492,743_-_362 ---------------CTGTAGAAGGGAGTGGTGATGATCTTGACC tac_U3.1_scaffold_13_620149,6204 ACAGAACGACGCGCTTTTCTCTAGGGAGTGGTGATGATCTTTACC acp_U3.1_Supercontig_1.15_70553, ---------------TCGATCAAGGGAGTGGTGATGATCTTGACC pbr_U3.1_Supercontig_1.5_2136912 ---------------TCAATCCAGGGAGTGGTGATGATCTTGACC tau_U3.1_scaffold_16_407464,4077 TCGGGCGCTTGCGA-TGTGTCTAGGGAGTGGTGATGATCTTTACC and_U3.1_VIII_3287847,3288125___ ---------TGGCGCCTGGTCTAGGGAGTGGTGATGATCTTGACC and_U3.2_V_2435879,2436155_-_398 ---------TGGCG-CTGGTCTAGGGAATGGTGATGATCTTAACC ate_U3.1_adopted_1.7_218218,2185 GC-------GGGCA-TCGGTCAAGGGAGTGGTGATGATCTTGACC pfe_U3.1_scaffold_3_238275,23854 ---------AGTGTTTTGGTCTAGGGAGTGGTGATGATCTTTGCC pox_U3.1_scaffold_3_2289090,2289 ---------------TCGGTCCAGGGAGTGGTGATGATCTTGACC pox_U3.2_scaffold_7_3986094,3986 ---------------TCGGTCCAGGGAGTGGTGATGATCTTGACC pbe_U3.1_scaffold_2_1732113,1732 ---------------TCGGTCCAGGGAGTGGTGATGATCTTGACC pbe_U3.2_scaffold_1_1600465,1600 ---------------TCGGTCCAGGGAGTGGTGATGATCTTGACC pex_U3.1_scaffold_7_908590,90886 ---------------TCGGTCCAGGGAGTGGTGATGATCTTGACC pla_U3.2_scaffold_8_54412,54659_ ---------------TCGGTCCAGGGAGTGGTGATGATCTTGACC pla_U3.1_scaffold_2_1960338,1960 ---------------TCGGTCTAGGGAGTGGTGATGATCTTGACC pcy_U3.1_scaffold_4_924484,92475 ---------------TCGGTCTAGGGAGTGGTGATGATCTTGACC pex_U3.2_scaffold_1_6960432,6960 ---------------TCGGTCCAGGGAGTGGTGATGATCTTGACC pcy_U3.2_scaffold_4_2922612,2922 ---------------TCGGTCCAGGGAGTGGTGATGATCTTGACC afl_U3.1_EQ963481_1382473,138275 ---------------TTTGTCCAGGGAGTGGTGATGATCTTTACC aor_U3.1_II_1362245,1362527___40 ---------------TTTGTCCAGGGAGTGGTGATGATCTTTACC afl_U3.2_EQ963475_1122270,112255 ---------------CTCGTCCAGGGAGTGGTGATGATCTTTACC aor_U3.2_III_1106474,1106756_-_4 ---------------CTCGTCCAGGGAGTGGTGATGATCTTTACC ani_U3.1_III_2090761,2091056_-_4 ---------TG-TG-ATGGTCCAGGGAGTGGTGATGATCTTTACC ani_U3.2_II_3746131,3746426_-_42 ---------TG-CG-ATGGTCCAGGGAGTGGTGATGATCTTTACC acl_U3.1_adopted_368_1726981,172 GC-------TG-CG-ATGGTCCAGGGAGTGGTGATGATCTTGACC afu_U3.1_VI_2847001,2847303___43 GT-------TG-CT-CTGGTCCAGGGAGTGGTGATGATCTTGACC nfi_U3.1_adopted_9201_2962614,29 GT-------TG-CT-CTGGTCCAGGGAGTGGTGATGATCTTGACC abe_U3.1_Supercontig_22_155799,1 TCGTCGTGGCGTC---TGACTTCGGTCGGCCT-GGCAAGGTGGGT aot_U3.1_Supercontig_3_366877,36 TTGTCGTGGCGTC---TGACTTCGGTCGGCCT-GGCAAGGTGGGC trb_U3.1_Supercontig_1_3681548,3 TTGCCGTGGCGTC---TGACTTCGGTCGGCCT-GGCAAGGTGGGT ure_U3.1_Supercontig_2.2_5215779 TAACAGAGGCGTC-TCTGACTTCGGTCGGTCT-CTGTGGGTGGGT cim_U3.1_Supercontig_3.2_123523, TAGTGGATGTGCCTTTTGACTTCGGTCGGTCT-CCCTAGGTGGGC cps_U3.1_Supercontig_1.2_148282, TAGTGGATGTGCCTTTTGACTTCGGTCGGTCT-CCCTAGGTGGGC aap_U3.1_Contig1423_987,1250___3 TTGCGCTAGCGTC--TTGACTTCGGTCGGCTG-CGTCTGGTGGGT aap_U3.2_Contig98_492,743_-_362 TTACACTGGTGAC--TTGACTTCGGTCGGCCGTGTTTTGGTGGGT tac_U3.1_scaffold_13_620149,6204 TTGTTTTGGCGTC--TTGACTTCGGTCGGCTG-GACTTGGTGGGT acp_U3.1_Supercontig_1.15_70553, TTGCCCTGGCGTC--TTGACTTCGGTCGGCCT-GGTTTGGTGGGC pbr_U3.1_Supercontig_1.5_2136912 TTGCCTTGGCGTC--TTGACTTCGGTCGGCCT-GGTTTGGTGGGC tau_U3.1_scaffold_16_407464,4077 TTGTCTCGGCGTC--TTGACTTCGGTCGGTCG-GACATGGTGGGT and_U3.1_VIII_3287847,3288125___ TTGTCGTGGCGTC--TTGACTTCGGTCGGCCT-GACTTGGTGGGT and_U3.2_V_2435879,2436155_-_398 TTGTCGTGGCGTC--TTGACTTCGGTCGGCCT-GACTTGGTGGGT ate_U3.1_adopted_1.7_218218,2185 TTGTCTTGACGTC---GGACTTCGGTCGGTCG-GACTTGGTGGGT pfe_U3.1_scaffold_3_238275,23854 TGGTCTCGGCGTC---TGACTTCGGTCGGCTG-GTCCTGGTGGGT pox_U3.1_scaffold_3_2289090,2289 TGGTCTCGGCGTC--TTGACTTCGGTCGGCTG-GTCCTGGTGGGT pox_U3.2_scaffold_7_3986094,3986 TGGTCTCGGCGTC--TTGACTTCGGTCGGCTG-GTCCTGGTGGGT pbe_U3.1_scaffold_2_1732113,1732 TGGTCTCGGCGTC---TGATTTCGGTCGGTCG-GTCCTGGTGGGT pbe_U3.2_scaffold_1_1600465,1600 TGGTCTCGATGTC---TGACTTCGGTCGGTCG-GTCCTGGTGGGT pex_U3.1_scaffold_7_908590,90886 TGGTCTCGATGTC---TGACTTCGGTCGGTCG-GTCCTGGTGGGT pla_U3.2_scaffold_8_54412,54659_ TGGTCTCGACGTC---TGACTTCGGTCGGTCG-GTCCTGGTGGGT pla_U3.1_scaffold_2_1960338,1960 TGGTCTCGACGTC--TTGACTTCGGTCGGTCG-GTCCTGGTGGGT pcy_U3.1_scaffold_4_924484,92475 TGGTCTCGACGTC--TTGACTTCGGTCGGTCG-GTCCTGGTGGGT pex_U3.2_scaffold_1_6960432,6960 TGGTCTCGACGTC--TTGACTTCGGTCGGTCG-GTCCTGGTGGGT pcy_U3.2_scaffold_4_2922612,2922 TGGTCTCGGCGTC---TGACTTCGGTCGGTCG-GTCCTGGTGGGT afl_U3.1_EQ963481_1382473,138275 TTGTCTTGACGTC--TTGACTTCGGTCGGTCA-GATTTGGTGGGT aor_U3.1_II_1362245,1362527___40 TTGTCTTGACGTC--TTGACTTCGGTCGGTCA-GATTTGGTGGGT afl_U3.2_EQ963475_1122270,112255 TTGTCTCGATGTC--TTGATTTCGGTCGGTCG-GACTTGGTGGGT aor_U3.2_III_1106474,1106756_-_4 TTGTCTCGATGTC--TTGATTTCGGTCGGTCG-GACTTGGTGGGT ani_U3.1_III_2090761,2091056_-_4 TTGTCATGATGTC--TTGACTTCGGTCGGTCG-GACTTGGTGGGT ani_U3.2_II_3746131,3746426_-_42 TTGTCATGATGTC--TTGACTTCGGTCGGTCG-GACTTGGTGGGT acl_U3.1_adopted_368_1726981,172 TTGTCCTGACGTC--TTGACTTCGGTCGGTCG-GATTTGGTGGGC afu_U3.1_VI_2847001,2847303___43 TTGTCCTGACGTC--TAGACTTCGGTCGGTCG-GACTTGGTGGGT nfi_U3.1_adopted_9201_2962614,29 TTGTCCTGACGTC--TAGACTTCGGTCGGTCG-GACTTGGTGGGT abe_U3.1_Supercontig_22_155799,1 GTCGAGGAGGTCTGAAAGGT aot_U3.1_Supercontig_3_366877,36 GTCGAGGAGGTCTGAAAGGT trb_U3.1_Supercontig_1_3681548,3 GTCGAGGAGGTCTGAAAGGT ure_U3.1_Supercontig_2.2_5215779 GTCGAGGAGGTCTGAAGGAT cim_U3.1_Supercontig_3.2_123523, GTCGAGGAGGTCTGAAGGAT cps_U3.1_Supercontig_1.2_148282, GTCGAGGAGGTCTGAAGGAT aap_U3.1_Contig1423_987,1250___3 GTACTGGAGGTCTGAAAGAG aap_U3.2_Contig98_492,743_-_362 GTCGGAGAGGTCTGAAAGAG tac_U3.1_scaffold_13_620149,6204 GTCGAGGAGGTCTGAAAGGC acp_U3.1_Supercontig_1.15_70553, ACTGTGGAGGTCTGAAAGGT pbr_U3.1_Supercontig_1.5_2136912 GCTGTGGAGGTCTGAAAGGT tau_U3.1_scaffold_16_407464,4077 GTCGAGGAGGTCTGAAAGGT and_U3.1_VIII_3287847,3288125___ GTCGAGGAGGTCTGAAAGGC and_U3.2_V_2435879,2436155_-_398 ATCGAGGAGGTCTGAAAGGC ate_U3.1_adopted_1.7_218218,2185 GTCGAGGAGGTCTGAAAGGT pfe_U3.1_scaffold_3_238275,23854 GTCGAGGAGGTCTGAAAGGT pox_U3.1_scaffold_3_2289090,2289 GTCGAGGAGGTCTGAAAGGT pox_U3.2_scaffold_7_3986094,3986 GTCGAGGAGGTCTGAAAGGT pbe_U3.1_scaffold_2_1732113,1732 GTCGAGGAGGTCTGAAAGGT pbe_U3.2_scaffold_1_1600465,1600 GTCGAGGAGGTCTGAAAGGT pex_U3.1_scaffold_7_908590,90886 GTCGAGGAGGTCTGAAAGGT pla_U3.2_scaffold_8_54412,54659_ GTCGAGGAGGTCTGAAAGGT pla_U3.1_scaffold_2_1960338,1960 GTCGAGGAGGTCTGAAAGGT pcy_U3.1_scaffold_4_924484,92475 GTCGAGGAGGTCTGAAAGGT pex_U3.2_scaffold_1_6960432,6960 GTCGAGGAGGTCTGAAAGGT pcy_U3.2_scaffold_4_2922612,2922 GTCGAGGAGGTCTGAAAGGT afl_U3.1_EQ963481_1382473,138275 GTTGAGGAGGTCTGAAAGGT aor_U3.1_II_1362245,1362527___40 GTTGAGGAGGTCTGAAAGGT afl_U3.2_EQ963475_1122270,112255 GTTGAGGAGGTCTGAAAGGT aor_U3.2_III_1106474,1106756_-_4 GTTGAGGAGGTCTGAAAGGT ani_U3.1_III_2090761,2091056_-_4 GTCGAGGAGGTCTGAAAGGT ani_U3.2_II_3746131,3746426_-_42 GTCGAGGAGGTCTGAAAGGT acl_U3.1_adopted_368_1726981,172 GTCGAGGAGGTCTGAAAGGT afu_U3.1_VI_2847001,2847303___43 GTCGAGGAGGTCTGAAAGGT nfi_U3.1_adopted_9201_2962614,29 ATCGAGGAGGTCTGAAAGGT