snoRNAs |
|
ICI |
Target (aln) |
Target (hsa) |
hostgene |
function |
expression |
|
comment |
SNORD100 |
HBII-429 |
1.54 |
18S-493 & 18S-570 |
436 & 509 |
RPS12 |
ribosomal protein |
Adult-UP, Fetus-DOWN |
|
|
SNORD11 |
HBII-95 |
0.63 |
|
|
NOP58 |
core protein |
always |
|
|
|
|
|
|
|
|
|
|
|
|
SNORD14 |
U14 |
1.43 |
18S-520 |
462 |
RPS13 |
ribosomal protein |
all tissues |
|
|
SNORD113 |
14q(I) |
0.59 |
|
|
MEG8 |
ncRNA |
brain,ovary,testis,lymph node |
orphan |
imprinted, snoRNA in 9 cluster |
|
|
|
|
|
|
|
|
|
|
SNORD42 |
U42 |
1.37 |
18S-129 |
116 |
RPL23A |
ribosomal protein |
Adult:DOWN (E-MTAB-62) |
|
|
SNORD68 |
HBII-202 |
0.68 |
|
|
RPL13 |
Mitochondrial ribosomal protein |
Adult-UP, Fetus-DOWN |
18S-484/28S-3267 |
|
|
|
|
|
|
|
|
|
|
|
SNORD66 |
HBII-142 |
1.14 |
18S-1399 |
1272 |
EIF4G1 |
eukaryotic translation initiation factor |
|
|
|
SNORD114 |
14q(II) |
0.55 |
|
|
MEG8 |
ncRNA |
brain,ovary,testis,lymph node |
orphan |
imprinted, snoRNA in 31 cluster |
|
|
|
|
|
|
|
|
|
|
SNORD59 |
|
0.7/0.49 |
18s-1143/18S-1513 |
1031/ |
ATP5B |
ATP |
Adult-DOWN, Fetus-UP |
|
|
SNORD30 |
|
0.69/1.08 |
|
|
U22HG |
ncRNA |
|
28S-3804(D')) |
|
|
|
|
|
|
|
|
|
|
|
SNORD27 |
U27 |
1.31 |
18S-39 |
27 |
U22HG |
ncRNA |
|
|
|
GGgCD49 |
|
1.01 |
|
|
|
NA |
|
|
|
SNORD15 |
U15 |
0.67 |
|
|
RPS3 |
ribosomal protein |
Adult-UP, Fetus-Down |
28S-3790(m&Y) |
|
|
|
|
|
|
|
|
|
|
|
SNORD110 |
HBII-55 |
1.31 |
18S-1415 |
1288 |
NOP56 |
core protein |
always |
|
|
SNORD17 |
HBi-43 |
0.41 |
|
|
SNX5 |
sorting nexin, cellular trafficking |
|
28S-3790(m&Y) |
|
|
|
|
|
|
|
|
|
|
|
SNORD19 |
HBII-108 |
1.42 |
18S-761 |
683 |
GNL3-Iso1-4 |
guanine binding |
Isoforms1-4 |
|
|
SNORD69 |
HBII-210 |
0.70 |
|
|
GNL3-Iso2-4 |
guanine binding |
Isoforms 2-4 |
|
|
|
|
|
|
|
|
|
|
|
|
SNORD45 |
U54 |
1.43 |
18S-173 |
159 |
RABGGTB |
Rab geranylgeranyltransferase |
|
|
|
SNORD115 |
HBII-52 |
0.59 |
|
|
SNURF |
|
|
serotonin receptor |
|
|
|
|
|
|
|
|
|
|
|
SNORD28 |
U28 |
1.23 |
18S-1521 |
1391 |
U22HG |
ncRNA |
|
|
|
SNORD88 |
HBII_180 |
0.47 |
|
|
MGC13170 |
multidrug resistence |
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORA42 |
ACA42 |
1.48 |
18S-122 |
109 |
KIA0907 |
|
|
|
|
SNORA39-60-71 |
ACA39/U71 |
1.03 |
|
|
LOC128439 |
ESTs |
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORA70 |
U70 |
1.80 |
18S-1880 |
1692 |
RPL10 |
ribosomal protein |
Adult-DOWN, Fetus-UP |
|
|
SNORA58 |
ACA58 |
0.70 |
|
|
MRPL3 |
mitochondrial ribosomal protein |
|
28S-3823 |
|
|
|
|
|
|
|
|
|
|
|
SNORA50-76 |
ACA50/ACA76 |
1.42 |
18S-46 |
34 |
CNOT1 |
ESTs |
|
|
|
SNORA2-34 |
ACA2/ACA34 |
0.77 |
|
|
FLJ20436 |
|
|
28S-4296/28S-4282 |
|
|
|
|
|
|
|
|
|
|
|
SNORA40 |
ACA40 |
0.97 |
18S-1299 |
1174 |
AK128061 |
|
|
|
|
SNORA69 |
U69 |
0.80 |
|
|
RPL39 |
ribosomal protein |
Adult-UP, Fetus-DOWN |
5.8S-69/18S-39 |
|
|
|
|
|
|
|
|
|
|
|
SNORA4 |
ACA4 |
1.21 |
18S-1476 |
1347 |
EIF4A2 |
eukaryotic translation initiation factor |
Adult-DOWN, Fetus-UP |
|
|
SNORA42-80 |
ACA42/ACA67 |
1.20 |
|
|
KIA0907 |
|
|
18S-572/18S-109 |
|
SNORA79 |
ACA65 |
1.02 |
|
|
GTF2A1 |
transcription initiation factor |
|
U6-31&U6-86 |
|
|
|
|
|
|
|
|
|
|
|
SNORA79 |
ACA65 |
0.95 |
18S-1628 (unknown) |
|
GTF2A1 |
transcription initiation factor |
|
U6-31&U6-86 |
|
SNORA56 |
ACA56 |
0.77 |
|
|
DKC1 |
dyskerin/core protein |
always |
|
|
|
|
|
|
|
|
|
|
|
|
SNORA5 |
ACA5 |
1.19 |
18S-1809 |
|
TBRG4 |
transforming growth factor beta regulator |
Adult-UP, Fetus-DOWN |
|
|
SNORA48 |
ACA48 |
0.64 |
|
|
EIF4A1 |
eukaryotic translation initiation factor |
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORA51 |
ACA51 |
1.13 |
18S-1026 |
|
GAR1 |
core protein |
|
orphan |
|
SNORA22 |
ACA22 |
0.96 |
|
|
BC052238 |
|
|
28S-4975/28S-4966 |
|
|
|
|
|
|
|
|
|
|
|
SNORA66 |
U66 |
0.91 |
18S-132 |
119 |
RPL5 |
ribosomal protein |
|
|
|
SCARNA1 |
ACA35 |
0.74 |
|
|
PPP1R8 |
protein phosphatase, regulation of transcription |
|
U2-89 |
|
|
|
|
|
|
|
|
|
|
|
SNORA8 |
ACA8 |
1.31 |
18S-1168 |
|
MGC5306 |
hypothetical protein |
|
|
|
SCARNA3 |
HBII-100 |
0.75 |
|
|
RFWD2 |
ring finger WD repeat ubiquitin protein ligase |
probably differential (cell cycle checkpoint) |
U6-40 |
|
|
|
|
|
|
|
|
|
|
|
SNORA46 |
ACA46 |
1.07 |
18S-716 |
649 |
CNOT1 |
ESTs |
|
|
|
SNORA50-76 |
ACA50/ACA76 |
10.73 |
|
|
CNOT1 |
ESTs |
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORA44 |
ACA44 |
1.26 |
18S-764 |
686 |
AF277181 |
hypothetical protein |
|
|
|
SNORA5 |
ACA5 |
1.02 |
|
|
TBRG4 |
transforming growth factor beta regulator |
Adult-UP, Fetus-DOWN |
|
|
SNORA11 |
U107 |
0.84 |
|
|
MAGED2 |
melanoma antigene family |
testis/placenta, isoforms |
|
|
|
|
|
|
|
|
|
|
|
|
SNORA55 |
ACA55 |
1.14 |
18S-756 |
|
PABPC4 |
poly(A)-binding protein |
|
18S-36 |
|
SNORA29 |
ACA29 |
0.86 |
|
|
TCP1 |
T-complex, ATP binding |
|
orphan |
|
|
|
|
|
|
|
|
|
|
|
SNORA10 |
ACA10 |
1.13 |
18S-247 |
210 |
RPS2 |
ribosomal protein |
Adult-UP, Fetus-DOWN |
|
|
SNORA70 |
U70 |
0.64 |
|
|
RPL10, QM |
ribosomal protein |
Adult-UP, Fetus-DOWN, only in placental villi |
|
|
SNORA33 |
ACA33 |
0.60 |
|
|
RPS12 |
Mitochondrial ribosomal protein |
Adult-UP, Fetus-DOWN |
|
|
|
|
|
|
|
|
|
|
|
|
SNORD92 |
HBII-316 |
1.14/0.54 |
28S-3700/28S-4807 |
3846 |
D26488 |
WD repeat protein |
|
|
|
SNORD95 |
U95 |
0.55/0.73 |
|
|
GNB2L1 |
guanine binding |
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORD53 |
U53 |
1.08 |
28S-4809 |
3848 |
D26488 |
WD repeat protein |
|
|
|
SNORD14 |
U14 |
0.57 |
|
|
RPS13 |
ribosomal protein |
|
18S- /18S- |
|
|
|
|
|
|
|
|
|
|
|
SNORD1 |
snR38A |
0.74 |
28S-4839 |
3878 |
|
ESTs |
|
|
|
SNORD12 |
HBII-109/U106 |
0.59 |
|
|
C20orf199 |
|
|
|
|
SNORD60 |
U60 |
0.53 |
|
|
|
ESTs |
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORD60 |
U60 |
1.23 |
28S-5348 |
|
|
ESTs |
|
|
|
SNORD11 |
HBII-95 |
0.57 |
|
|
NOP58 |
core protein |
always |
18S-509 |
|
|
|
|
|
|
|
|
|
|
|
SNORD68 |
HBII-202 |
0.94 |
28S-3267 |
2388 |
RPL13 |
ribosomal protein |
Adult-UP, Fetus-DOWN |
|
|
SNORD36 |
U36 |
0.50 |
|
|
RPL7A |
ribosomal protein |
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORD80 |
U80 |
1.14 |
28S-2476 |
|
GAS5 |
ncRNA |
|
|
|
SNORD1 |
snR38A |
0.55 |
|
|
|
ESTs |
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORD67 |
HBII-166 |
0.79 |
28S-5436 |
4426 |
CKAP5 |
cytoskeleton associated protein |
|
|
|
SNORD49 |
U49 |
0.55 |
|
|
MGC40157 |
hypothetical protein |
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORD17 |
HBI-43 |
0.93 |
28S-475 |
|
SNX5 |
sorting nexin, cellular trafficking |
|
|
|
SNORD123 |
SNORD123 |
0.66 |
|
|
|
Unigene cluster |
|
orphan |
|
|
|
|
|
|
|
|
|
|
|
SNORD95 |
U95 |
0.88 |
28S-3710 |
|
GNB2L1 |
guanine binding |
|
|
|
SNORD47 |
U47 |
0.52 |
|
|
AL1101141 |
|
|
28S-3866 |
|
|
|
|
|
|
|
|
|
|
|
SNORD32 |
U32 |
0.50 |
28S-2374 |
|
|
|
|
|
|
SNORD51 |
U51 |
0.50 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORD69 |
HBII-210 |
0.90 |
28S-5474 |
|
GNL3-Iso2-4 |
|
|
|
|
SNORD19 |
HBII-108 |
0.82 |
|
|
GNL3-Iso1-4 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORD1 |
snR38A |
1.51 |
28S-5371 |
|
|
ESTs |
|
|
|
SNORD107 |
HBII-436 |
0.51 |
|
|
SNURF |
|
|
orphan |
|
|
|
|
|
|
|
|
|
|
|
SNORD119 |
SNORD119 |
0.66 |
28S-5573 |
|
SNRPB |
small nuclear ribonucleoprotein |
|
|
|
SNORD115 |
HBII-52 |
0.63 |
|
|
SNURF |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORA2-34 |
ACA2/ACA34 |
0.89 |
28S-5285 |
|
FLJ20436 |
|
|
28S-4296/28S-4282 |
|
SCARNA3 |
HBII-100 |
0.87 |
|
|
RFWD2 |
ring finger WD repeat ubiquitin protein ligase |
probably differential (cell cycle checkpoint) |
U6-40 |
|
|
|
|
|
|
|
|
|
|
|
SNORA63 |
E2 |
0.81 |
28S-5501 |
4491 |
EIF4A2 |
eukaryotic translation initiation factor |
Adult-DOWN, Fetus-UP (E-GEOD-6236) |
|
|
SNORA10 |
ACA10 |
0.73 |
|
|
RPS2 |
ribosomal protein |
Adult-UP, Fetus-DOWN |
|
|
|
|
|
|
|
|
|
|
|
|
SNORA13 |
ACA13 |
0.84 |
28S-5882 |
|
TIGA |
|
|
|
|
SNORA17-43 |
ACA17 |
0.80 |
|
|
|
ESTs |
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORA3-45 |
ACA3 |
0.98 |
28S-4899 |
|
RPL27A |
ribosomal protein |
|
|
|
SNORA20 |
ACA20 |
0.88 |
|
|
TCP1 |
T-complex, ATP binding |
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORA78 |
ACA64 |
0.83 |
28S-5263 |
|
DKFZp686N06141 |
|
|
|
|
SNORA74 |
U19 |
0.74 |
|
|
MATR3 |
Matrin 3 |
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORA2-34 |
ACA2/ACA34 |
0.73 |
28S-5288 |
|
FLJ20436 |
|
|
|
|
SNORA7 |
ACA7 |
0.71 |
|
|
RPL32 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
SNORA32 |
ACA32 |
0.83 |
28S-2720 |
|
FLJ46181 |
hypothetical protein |
|
|
|
SNORA5 |
ACA5 |
0.71 |
|
|
TBRG4 |
transforming growth factor beta regulator |
probably differentially |
|
|