# STOCKHOLM 1.0          MAMMALIA W
#=GF AU Infernal 1.0.1
#=GC CS                   .23335.....2.............2...2322.........2232.....3235........5323..53332..
#=GC BP                   +++++++..++++...........++++.+++++.......+++++....+++++........++++++++++++.
NC_004920_W_4933_4999_p   AGGGGUUUAGGUU...CAUUCA..GACCAAAAGCCUUCAAAGCUUUAAGAAAGUG....AUAUCACUUAACCCCUG
NC_010304_W_4931_4999_p   AGGGGUUUAGGUUc.aUAUUAA..GACCAAAAGCCUUCAAAGCUUUAAGAAAGUG....ACUCCACUUAACCCCUG
NC_010301_W_4930_4999_p   AGGGGUUUAGGUU..aACCACA..GACCGAGGGCCUUCAAAGCCCUAAGCAAGUAc..aGCACCACUUAACCCCUG
NC_004919_W_4945_5014_p   AGGGGUUUAGGUU..aAUAACA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUAc..aACACCACUUAACCCCUG
NC_004921_W_4923_4990_p   AGAGGUUUAGGUU..aCAUCUA..GACCAAGAGCCUUCAAAGCUCUAAGUAAGUU....ACAUUUCUUAACCUCUG
NC_004026_W_4928_4995_p   AGGGACUUAGGUUa.aACAACA..GACCAAGGGCCUUCAAAGCCCUAAGCAGGUA....-UAUUACUUAGUCCCUG
NC_005129_W_4947_5014_p   AGGAAUUUAGGUU...AAAACA..GACCAAGAGCCUUCAAAGCCCUAAGUAAGUA...cAUUAUACUUAACUCCUG
NC_000934_W_4948_5014_p   AGGAAUUUAGGUU...-AAACA..GACCAAGAGCCUUCAAAGCCCCAAGUAAGUA...cAUUAUACUUAACUCCUG
NC_009574_W_4950_5017_p   AGGAAUUUAGGUU...AGAACA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uGUUAUACUUAACUCCUG
NC_007596_W_4948_5015_p   AGGAAUUUAGGUU...AAAACA..GACCAAGAGCCUUCAAAGCCCUAAGUAAGUG...cAUUAUACUUAACUCCUG
NC_003314_W_4945_5012_p   AGGGAUUUAGGUU...AAUAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUU...aCCAACACUUAAUCCCUG
NC_010302_W_4953_5021_p   AGGGAUUUAGGUU...AGCAGA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUUa..aUUAACACUUAAUCCCUG
NC_002631_W_4921_4988_p   AGAGGGUUAGGCU...AAAUUA..GACCGAGAGCCUUCAAAGCUCUAAGCAAGUA...aACAAUACUUACCCUCUG
NC_002078_W_4947_5013_p   AGGGAUUUAGGUU...ACGCUA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUA....CAAGUACUUAAUCCCUG
NC_004031_W_4960_5025_p   AGAAAUUUAGGUU...-AAACA..GACCAAGGGCCUUCAAAGCCCUAAGCAAGUG....UUCCCACUUAAUUUCUG
NC_004028_W_4964_5030_p   AGGGGUUUAGGUU...-ACAUA..GACCGAGAGCCUUCAAAGCUCUAAGCAAGUA...aACUUUACUUAACCCCUG
NC_001913_W_4971_5037_p   AGGAGUUUAGGUU...-ACACA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUA...gAUCAUACUUAACCCCUG
NC_003033_W_4954_5021_p   AGAAGUUUAGGUU...AAACCA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUA...gCACAUACUUAACUUCUG
NC_011029_W_4951_5018_p   AGAAGUUUAGGUU...AAGCCA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUA...gUAAGUACUUAACUUCUG
NC_005358_W_4950_5017_p   AGAAGUUUAGGUU...AAACCA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUA...gCACAUACUUAACUUCUG
NC_000884_W_4929_4998_p   AGAGGAUUAGGUU...-AAACA..GACCUAGAGCCUUCAAAGCUCUAAGCAAAUAuuagACAGUAUUUAUCCUCUG
NC_002658_W_4963_5029_p   AGGAAAUUAGGUU...-AAAAA..GACCAAGAGCCUUCAAAGCCCUAAGUAAAUA...cUAUCUAUUUAUUUCCUG
NC_009056_W_4953_5018_p   AGAAAUUUAGGUU...-ACCUA..GACCAAGAGCCUUCAAAGCCCUAAGAAAGUC....ACAAGACUUAAUUUCUG
NC_005314_W_4961_5027_p   AGAAGUUUAGGUU...-AUAUA..GACCAAGAGCCUUCAAAGCUCUAAGAAAGUA...aACACUGCUUAACUUCUG
NC_001892_W_4935_5002_p   AGGAAUUUAGGUU...-AACCA..GACCAAUAGCCUUCAAAGCUUUAAGCAAGUAa..uCAAAUACUUAAUUCCUG
NC_013571_W_4932_4998_p   AGAAGUUUAGGAU...-AAUCA..GUCCAAGAGCCUUCAAAGCCCUAAGUAGACC...cACAAAGUUUAACUUCUG
NC_003041_W_4924_4990_p   AGAAGUUUAGGAU...-AGUAA..GUCCAAGAGCCUUCAAAGCCCUAAGCAAACC...cAUAAAGUUUAACUUCUG
NC_008064_W_4925_4991_p   AGAAGUUUAGGAU...-AACUA..GUCCAAGAGCCUUCAAAGCCCUAAGUAAACC...cAUAAAGUUUAACUUCUG
NC_013563_W_4925_4991_p   AGAAGUUUAGGAU...-AGUCA..GUCCAAGAGCCUUCAAAGCCCUAAGCAAACC...cAUAAAGUUUAACUUCUG
NC_007936_W_4931_4997_p   AGAAGUUUAGGAU...AAUUCA..GUCCAAGAGCCUUCAAAGCCCUUAGUAAACC....UACAAGUUUAACUUCUG
NC_013276_W_4935_5000_p   AGAAGUUUAGGAU...AAAUAA..GUCCGAUGGCCUUCAAAGCCCUUAGUAAACC....-CUUAGUUUAACUUCUG
NC_013068_W_16110_16176_p AGAAGUUUAGGAU...AAAUCA..GUCCAAGAGCCUUCAAAGCCCUUAGUAAACC....CAUUAGUUUAACUUCUG
NC_005089_W_4950_5016_p   AGAAGUUUAGGAU...AUACUA..GUCCGCGAGCCUUCAAAGCCCUAAGAAAACA....CACAAGUUUAACUUCUG
NC_012387_W_4950_5016_p   AGAAGUUUAGGAU...AUACUA..GUCCGCGAGCCUUCAAAGCUCUAAGAAAACA....CACAAGUUUAACUUCUG
NC_006914_W_4950_5016_p   AGAAGUUUAGGAU...AUACUA..GUCCGCGAGCCUUCAAAGCCCUAAGAAAACA....CACAAGUUUAACUUCUG
NC_006915_W_4951_5017_p   AGAAGUUUAGGAU...AUACUA..GUCCGCGAGCCUUCAAAGCCCUAAGAAAACA....CACAAGUUUAACUUCUG
NC_010339_W_4951_5017_p   AGAAGUUUAGGAU...AUACUA..GUCCGCGAGCCUUCAAAGCCCUAAGAAAACA....CACAAGUUUAACUUCUG
NC_010650_W_4948_5014_p   AGAAGUUUAGGAU...AUACAA..GUCCGCGGGCCUUCAAAGCCCUAAGAAAACA....CGCAAGUUUAACUUCUG
NC_012389_W_4936_5003_p   AGAAGUUUAGGAU..aUAUACA..GUCCAAGAGCCUUCAAAGCCCUUAGAAAACA....AACGAGUUUAACUUCUG
NC_001665_W_4943_5008_p   AGAAGUUUAGGAU...-AUACA..GUCCAAGAGCCUUCAAAGCCCUUAGAAAACA....AACAAGUUUAACUUCUG
NC_012461_W_4940_5005_p   AGAAGUUUAGGAU...-AUAAA..GUCCAAGAGCCUUCAAAGCCCUUAGAAAACA....AGCAAGUUUAACUUCUG
NC_012374_W_4938_5003_p   AGAAGUUUAGGAU...-AUACA..GUCCAAGAGCCUUCAAAGCCCUUAGAAAACA....AGCAAGUUUAACUUCUG
NC_011638_W_4935_5000_p   AGAAGUUUAGGAU...-AUGCA..GUCCAAGAGCCUUCAAAGCCCUUAGAAAACA....AACAAGUUUAACUUCUG
NC_005315_W_4952_5018_p   AGAAGCUUAGGAU..aUUACCA..GUCCAAAGGCCUUCAAAGCCUUAAGAAAACA....-CAACGUUUAGCUUCUG
NC_002369_W_4963_5029_p   AGGAAUUUAGGCU...AAUAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUA....UUAAUACUUAAUUCCUG
NC_007009_W_4936_5001_p   AGAAAUUUAGGUU...AAAUAA..GACCAAGAGCCUUCAAAGCCCUCAGUAAGUA....-AACUACUUAAUUUCUG
NC_009747_W_4933_4998_p   AGAAAUUUAGGUU...AAAUAA..GACCAAGAGCCUUCAAAGCCCUUAGUAAGUA....-GACCACUUAAUUUCUG
NC_008066_W_5507_5572_p   AGAAAUUUAGGUU...AAAUAA..GACCAAGAGCCUUCAAAGCCCUUAGUAAGUA....-GACCACUUAAUUUCUG
NC_009748_W_4930_4995_p   AGAAAUUUAGGUU...AAAUAA..GACCAAGAGCCUUCAAAGCCCUCAGUAAGU-....AAACCACUUAAUUUCUG
NC_005943_W_5463_5529_p   AGAAAUUUAGGUU...AAACAA..GACCAAGAGCCUUCAAAGCCCUUAGUAAGUA....AAAACACUUAAUUUCUG
NC_002764_W_4928_4994_p   AGAAAUUUAGGUU...AAACAA..GACCGAGAGCCUUCAAAGCCCUCAGUAAGUA....AAAACACUUAAUUUCUG
NC_001992_W_4942_5008_p   AGAAAUUUAGGUU...AGACAA..GACCAAGAGCCUUCAAAGCCCUUAGCAAGUA....AAAUUACUUAAUUUCUG
NC_006901_W_4938_5007_p   AGAAAUUUAGGUU..aAAUACA..GACCAGAAGCCUUCAAAGCUCCCAGUAAGUUa..aAUCAUACUUAAUUUCUG
NC_008216_W_4937_5004_p   AGAAAUUUAGGUU...AAACCA..GACCAAAAGCCUUCAAAGCUUUUAGUAAGUU...aAAUAUACUUAAUUUCUG
NC_008219_W_4932_5001_p   AGAAACUUAGGUU..aAUAUAA..GACCGAGAGCCUUCAAAGCUCCUAGCAAGUUa..aAUUAUACUUAGUUUCUG
NC_008217_W_4929_4996_p   AGAAAUUUAGGUU...AAAUAA..GACCGAAAGCCUUCAAAGCUCUCAGUAAGUU...aAAUAAACUUAAUUUCUG
NC_008220_W_4929_4995_p   AGAAAUUUAGGUU...AAACCA..GACCAAAAGCCUUCAAAGCUUUCAGUAAGUU....AACAUGCUUAAUUUCUG
NC_008218_W_4938_5005_p   AGAAAUUUAGGUU...AAACUA..GACCGAAAGCCUUCAAAGCUCUUAGUAAGUU...aAAAAUACUUAAUUUCUG
NC_008215_W_4928_4994_p   AGAAAUUUAGGUU...AAAUAA..GACCGAAAGCCUUCAAAGCUCUAAGUAAGUU....AGUAUACUUAAUUUCUG
NC_006900_W_4935_5002_p   AGAAAUUUAGGUU...AAAUAA..GACCGAAAGCCUUCAAAGCUCUUAGUAAGUU...aAGCAUACUUAAUUUCUG
NC_001645_W_4930_4997_p   AGAAAUUUAGGUU..aAACAUA..GACCAAGAGCCUUCAAAGCCCUUAGUAAGUU....ACAACACUUAAUUUCUG
NC_011120_W_4931_4998_p   AGAAAUUUAGGUU..aAACAUA..GACCAAGAGCCUUCAAAGCCCUUAGUAAGUU....ACAACACUUAAUUUCUG
NC_012920_W_5512_5579_p   AGAAAUUUAGGUU..aAAUACA..GACCAAGAGCCUUCAAAGCCCUCAGUAAGUU....GCAAUACUUAAUUUCUG
NC_011137_W_5507_5574_p   AGAAAUUUAGGUU..aAAUACA..GACCAAGAGCCUUCAAAGCCCUCAGUAAGUU....GCAAUACUUAAUUUCUG
NC_001644_W_4932_4999_p   AGAAAUUUAGGUU..aAACACA..GACCAAGAGCCUUCAAAGCUCUCAGUAAGUU....ACAAUACUUAAUUUCUG
NC_001643_W_4930_4997_p   AGAAAUUUAGGUU..aAGCACA..GACCAAGAGCCUUCAAAGCCCUCAGCAAGUU....ACAAUACUUAAUUUCUG
NC_002083_W_4937_5003_p   AGAAAUUUAGGUU...AACACA..GACCAAGAGCCUUCAAAGCCCUCAGCAAGUC....ACAGCACUUAAUUUCUG
NC_001646_W_4934_4999_p   AGAAAUUUAGGUU...-ACACA..GACCAAGAGCCUUCAAAGCCCUCAGCAAGUC....ACAGCACUUAAUUUCUG
NC_002082_W_4928_4996_p   AGAAAUUUAGGUU..aAACACA..GACCAAGAGCCUUCAAAGCCCUCAGUAAGUU...aACAAAACUUAAUUUCUG
NC_002763_W_4935_5001_p   AGAAAUUUAGGUU...-AAUAA..GACCAAGAGCCUUCAAAGCCCCUAGUAAGUA...aAUUUUACUUAAUUUCUG
NC_012775_W_4927_4993_p   AGAAAUUUAGGUU...-AAUAA..GACCAAGAGCCUUCAAAGCCCUCAGUAAGUA...aGAAUUACUUAAUUUCUG
NC_002811_W_4952_5019_p   AGGAAUUUAGGUU...AACCUA..GACCAAGAGCCUUCAAAGCCCUAAGUAAGCU...aAAUAUGCUUAAUUCCUG
NC_012774_W_4964_5031_p   AGGAAUUUAGGUU...-AACCA..GACCAAGAGCCUUCAAAGCCCUAAGUAAGCUa..aAAUAUGCUUAAUUCCUG
NC_010299_W_4965_5032_p   AGGAAUUUAGGUU...-AAGUA..GACCAAGAGCCUUCAAAGCUCUAAGAAAGUAc..cUCGCUACUUAAUUCCUG
NC_012763_W_4986_5053_p   AGAGACUUAGGUU..aCAACUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAACA....GCUAUGUUUAGUCUCUG
NC_002765_W_4982_5048_p   AGAGGCUUAGGCU...AUACCA..GACCAAGAGCCUUCAAAGCUCUAAGAAAACG....ACAACGUUUAGCCUCUG
NC_012764_W_4966_5035_p   AGGGACUUAGGAGu.aUAAUUA..GACCAAGAGCCUUCAAAGCUCUAAGAAAGCA...aCAAACGCUUAGCCCCUG
NC_011053_W_4962_5028_p   AGAAAUUUAGGUU...-AAGUA..GACCAAGAGCCUUCAAAGCCCUAAGAAAGUA...aACAAUACUUAAUUUCUG
NC_012766_W_4959_5025_p   AGAAAUUUAGGUU...-AAAUA..GACCAAGAGCCUUCAAAGCCCUAAGAAAGUA...uAUAAUACUUAAUUUCUG
NC_012769_W_4959_5025_p   AGAAAUUUAGGUU...-AAAUA..GACCAAGAGCCUUCAAAGCCCUAAGAAAGUA...uAUAAUACUUAAUUUCUG
NC_012771_W_4955_5021_p   AGAAAUUUAGGUU...-AAAUA..GACCAAGAGCCUUCAAAGCCCUAAGAAAGUA...uACAAUACUUAAUUUCUG
NC_010300_W_4959_5025_p   AGAAAUUUAGGUU...-AAAUA..GACCAAGAGCCUUCAAAGCCCUAAGAAAGUA...uAUAAUACUUAAUUUCUG
NC_004025_W_4954_5021_p   AGAAAUUUAGGUU...AAACUA..GACCAAGAGCCUUCAAAGCCCUAAGAAAGUA...uAUAAUACUUAAUUUCUG
NC_012773_W_4966_5032_p   AGAAAUUUAGGUU...-AAAUA..GACCAAGAGCCUUCAAAGCCCUAAGAAAGUA...gAUCGUACUUAAUUUCUG
NC_012761_W_4972_5039_p   AGAGACUUAGGUU...AUAUCA..GACCAAGGGCCUUCAAAGCCCUAAGAAGACA...gACCAUGCCUAGCCUCUG
NC_012762_W_4972_5039_p   AGAGACUUAGGUU...AUAUCA..GACCGAGGGCCUUCAAAGCCCUAAGAAAGCA...gACCAUGCCUAGCCUCUG
NC_002521_W_4932_4999_p   AGAAAUUUAGGUU...-AAGCA..GACCGGAAGCCUUCAAAGCUUCAAGUAAGCCc..cCUACCGCUUAAUUUCUG
NC_011124_W_4962_5029_p   AGAAGUUUAGGUU...AAAUCA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUG...aCAUCCGCUUAACUCCUG
NC_009691_W_4963_5030_p   AGAAGUUUAGGUU...AAAUCA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUG...aCAUCCGCUUAACUCCUG
NC_008093_W_4957_5024_p   AGGAGUUUAGGUU...AGACCA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUG...cUAUACACUUAACCCCUG
NC_008092_W_4957_5024_p   AGGAGUUUAGGUU...AGACCA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUG...cUAUACACUUAACCCCUG
NC_010340_W_4956_5023_p   AGGAGUUUAGGUU...AGACCA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUG...cUAUACACUUAAUUCCUG
NC_002008_W_4956_5023_p   AGGAGUUUAGGUU...AGACCA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUG...cUACACACUUAACCCCUG
NC_011218_W_4958_5025_p   AGGAGUUUAGGUU...AGACCA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUG...cUAUACACUUAAUUCCUG
NC_009686_W_4956_5023_p   AGGAGUUUAGGUU...AGACCA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUG...cUAUACACUUAACCCCUG
NC_013445_W_4957_5024_p   AGGGGUUUAGGCU...AGACUA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUG...cUAUACACUUAACCCCUG
NC_013700_W_4955_5022_p   AGAGGUUUAGGUU...AAACUA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUG...uUGUUCACUUAACCCCUG
NC_008434_W_4958_5025_p   AGGGGUUUAGGUU...AAACGA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUG...cUGCACACUUAACCCCUG
NC_010497_W_4955_5022_p   AGAAGUUUAGGUU...-AAAAA..GACCAAGGACCUUCAAAGCCCUAAGUAAGUAc..uCCCACACUUAACUUCUG
NC_009692_W_4956_5022_p   AGAAGUUUAGGUU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUG...cUACUCACUUAACUCCUG
NC_011358_W_4955_5022_p   AGAAGUUUAGGUU...AAAAUA..GACCGAGGGCCUUCAAAGCCCCAAGUAAGUG...cUACCCACUUAACUCCUG
NC_012141_W_4956_5022_p   AGGGGUUUAGGUU...-AAAGA..GACCAAGGGCCUUCAAAGCCCCAAGUAAGUG...uCAUUCACUUAACUCCUG
NC_009678_W_4953_5019_p   AGAAGUUUAGGUU...-AAAGA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUG...uUAUACACUUAACUCCUG
NC_011579_W_4952_5018_p   AGAAGUUUAGGUU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUG...cCAUCCACUUAACUCCUG
NC_009677_W_4953_5019_p   AGAAGUUUAGGUU...-AAAAA..GACCAAGAGCCUUCAAAGCCCUAAGUAAGUG...cCUCUCACUUAACUUCUG
NC_011125_W_4957_5023_p   AGAAGUUUAGGUU...-AAAAA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUG...cUACUCACUUAACUUCUG
NC_004029_W_4962_5029_p   AGAGAUUUAGGUU...AAACUA..GACCAAGAGCCUUCAAAGCCCUAAGUAAGUA...aCGUCGACUUAAUCUCUG
NC_008417_W_4965_5032_p   AGGGAUUUAGGCU...AAACCA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUU...uCACUAACUUAAUCCCUG
NC_008420_W_4967_5034_p   AGGGAUUUAGGCU...AAAUCA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUU...uCAUUAACUUAAUCCCUG
NC_008415_W_4963_5030_p   AGGGAUUUAGGCU...AAACCA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUU...uCACUAACUUAAUCCCUG
NC_004030_W_4966_5033_p   AGGGAUUUAGGCU...AAACUA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUU...uCACUAACUUAAUCCCUG
NC_008419_W_4969_5036_p   AGGGAUUUAGGCU...AAACCA..GACCGAGGGCCUUCAAAGCCCUAAGUAAGUU...uCACUAACUUAAUCCCUG
NC_008418_W_4964_5031_p   AGGGAUUUAGGCU...AAACCA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUU...uCACUAACUUAAUCCCUG
NC_008416_W_4968_5035_p   AGGGAUUUAGGCU...AAACCA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUU...uCACUAACUUAAUCCCUG
NC_008427_W_4953_5020_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUAc..uCAUCAACUUAAUCUCUG
NC_008426_W_4959_5025_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUA...cUAUUAACUUAAUCUCUG
NC_001602_W_5861_5928_p   AGAGAUUUAGGCU...AAAAUA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUA...uUACUAACUUAAUCUCUG
NC_008425_W_4960_5026_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUA...uUAACAACUUAAUCUCUG
NC_008424_W_4961_5027_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUA...uCACCAACUUAAUCUCUG
NC_008423_W_4962_5028_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUA...uUAUCAACUUAAUCUCUG
NC_008422_W_4961_5028_p   AGAGAUUUAGGCU...AAGAUA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUA...uAAUCAACUUAAUCUCUG
NC_008421_W_4967_5033_p   AGAGAUUUAGGUU...-AAAAA..GACCAAGAGCCUUCAAAGCCCUAAGUAAGUG...cCAUCAACUUAAUCUCUG
NC_008428_W_4955_5021_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUA...cCAUUAACUUAAUCUCUG
NC_008429_W_4953_5019_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUA...cUAUUAACUUAAUCUCUG
NC_008430_W_4953_5019_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUA...cUACUAACUUAAUCUCUG
NC_001325_W_5887_5953_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUA...cUACUAACUUAAUCUCUG
NC_008431_W_4956_5022_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUA...uUACUAACUUAAUCUCUG
NC_008433_W_4953_5019_p   AGAGAUUUAGGCU...-AAAAA..GACCGAGGGCCUUCAAAGCCCUAAGUAAGUA...uUACUAACUUAAUCUCUG
NC_008432_W_4955_5021_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUA...uUACUAACUUAAUCUCUG
NC_009126_W_7411_7478_p   AGGAAUUUAGGCU...AAACUA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUG...cAACCCACUUAAUUCCUG
NC_009492_W_6323_6390_p   AGAGAUUUAGGCU...-AAACA..GACCAAGGGCCUUCAAAGCCUCAAGUAAGUGa..aAAUCCACUUAAUCUCUG
NC_011116_W_5820_5886_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGCAAGUG...aAACUCACUUAAUCUCUG
NC_009968_W_5848_5914_p   AGAGAUUUAGGCU...-AAAGA..GACCGAGGGCCUUCAAAGCCCUAAGUAAGUG...aAACUCACUUAAUCUCUG
NC_009970_W_5879_5945_p   AGAGAUUUAGGCU...-AAAAA..GACCGAGGGCCUUCAAAGCCCCAAGUAAGUG...aAACUCACUUAAUCUCUG
NC_009969_W_5826_5892_p   AGAGAUUUAGGCU...-AAACA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUG...aAACUCACUUAAUCUCUG
NC_003426_W_5906_5972_p   AGAGAUUUAGGCU...-AAAAA..GACCGAGGACCUUCAAAGUCCCAAGUAAGUG...aAACUCACUUAAUCUCUG
NC_003427_W_6099_6166_p   AGAGAUUUAGGCU...AAAAUA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUG...aAAUUCACUUAAUCUCUG
NC_003428_W_6095_6161_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUG...aAAUUCACUUAGUCUCUG
NC_011112_W_5842_5908_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUG...aAAUUCACUUAAUCUCUG
NC_009971_W_5858_5924_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUG...aAACCCACUUAAUCUCUG
NC_009331_W_6564_6629_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUA-GUG...aAACCCACUUAAUCUCUG
NC_008753_W_5932_5998_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUG...aAACCCACUUAAUCUCUG
NC_011118_W_6553_6619_p   AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUG...aAACCCACUUAAUCUCUG
NC_011117_W_16440_16506_p AGAGAUUUAGGCU...-AAAAA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUG...aAACCCACUUAAUCUCUG
NC_005212_W_5848_5915_p   AGAAGUUUAGGUU...AAAUUA..GACCAAGAGCCUUCAAAGCUCUAAGUAAGCC...cCACAGACUUAACUUCUG
NC_001700_W_5823_5890_p   AGAAGUUUAGGUU...AAACUA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUC...cUACAGACUUAACUUCUG
NC_008450_W_5852_5919_p   AGAAGUUUAGGUU...AAACUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUC...uCACAGACUUAACUUCUG
NC_010641_W_5912_5980_p   AGAAGUUUAGGUU...AAAUUA..GACCAAGAGCCUUCAAAGCUCUAAGUAAGCCc..uAACAGACUUAACUUCUG
NC_010638_W_5707_5775_p   AGAAGUUUAGGUU...AAAUUA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGCCc..uAGCAGACUUAACUUCUG
NC_006835_W_4957_5024_p   AGGGGUUUAGGCU...AGACUA..GACCAAGGGCCUUCAAAGCCCUAAGCAAAUC...aUACAGAUUUAAUCCCUG
NC_005268_W_4976_5044_p   AGGAGUUUAGGUU..aAAACUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAACUCCUG
NC_006930_W_4973_5041_p   AGGAGUUUAGGUU..aAAACUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAACUCCUG
NC_006931_W_4975_5043_p   AGGAGUUUAGGUU..aAAACUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAACUCCUG
NC_005271_W_4985_5055_p   AGGAGUUUAGGUUaaaACCUCA..GACCAAGGACCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAACUCCUG
NC_006926_W_4983_5053_p   AGGAGUUUAGGUUaaaCCCUUA..GACCAAGGGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAACUCCUG
NC_006929_W_4982_5050_p   AGGAGUUUAGGUU..aAACCCA..GACCAAGGACCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAACUCCUG
NC_006928_W_4981_5049_p   AGGAGUUUAGGUU..aAACCCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAACUCCUG
NC_007938_W_4980_5048_p   AGGAGUUUAGGUU..aAACCCA..GACCAAGGGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAACUCCUG
NC_001601_W_5394_5462_p   AGGAGUUUAGGUU..aAACCCA..GACCAAGGGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAACUCCUG
NC_007937_W_4977_5045_p   AGGAGUUUAGGUU..aGACCCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAACUCCUG
NC_001321_W_5397_5465_p   AGGAGUUUAGGUU..aAACCCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAACUCCUG
NC_006927_W_4990_5058_p   AGGAGUUUAGGUU..aAACCCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uCAUUUACUUAACUCCUG
NC_005270_W_4987_5054_p   AGGAGUUUAGGUU...AAACCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAACUCCUG
NC_005269_W_4977_5044_p   AGGAGUUUAGGCU...AAACCA..GACCAAGGGCCUUCAAAGCCCUAAGUAAGUA...uAAUUUACUUAACUCCUG
NC_012061_W_4979_5047_p   AGGGGUUUAGGUU...AAACAA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUAu..aAUUUUACUUAACCCCUG
NC_012062_W_4980_5048_p   AGGGGUUUAGGUU...AAAUAA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUAc..aAUUUUACUUAACCCCUG
NC_005278_W_4980_5048_p   AGGGGUUUAGGUU...AAUCAA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUAc..aAUUUUACUUAACCCCUG
NC_012057_W_4979_5047_p   AGGGGUUUAGGUU...AAACAA..GACCAAGAGCCUUCAAAGCCCUAAGUAAGUAu..aACUUUACUUAACCCCUG
NC_012051_W_4979_5047_p   AGGGGUUUAGGUU...AAACAA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUAu..aAUUUUACUUAACCCCUG
NC_012053_W_4979_5047_p   AGGGGUUUAGGUU...AGACAA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUAu..aAUUUUACUUAACCCCUG
NC_012058_W_4979_5047_p   AGGGGUUUAGGUU...AAACAA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUAu..aAUUUUACUUAACCCCUG
NC_012059_W_4979_5047_p   AGGGGUUUAGGUU...AAAUAA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUAu..aAUUUUACUUAACCCCUG
NC_005276_W_4979_5047_p   AGAGGUUUAGGUU...AAAUCA..GACCGAGAGCCUUCAAAGCUCUAAGUAAGUAu..aAUUUCACUUAACCCCUG
NC_007629_W_4982_5049_p   AGAGAUUUAGGUU...AAAACA..GACCAAGAGCCUUCAAAGCCCUAAGUAAGUA...uAAUUUACUUAACCUCUG
NC_005279_W_4981_5048_p   AGGGAUUUAGGUU...-AAUCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUAu..aACUUUACUUAAUCCCUG
NC_005280_W_4982_5050_p   AGGGGUUUAGGUU...AAAUCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUAu..aAUCUUACUUAACCCCUG
NC_005272_W_4978_5046_p   AGGAGUUUAGGCU..aAAUCCA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUA...cAACUCACUUAACUCCUG
NC_002503_W_4985_5053_p   AGGAGUUUAGGUU..aCACUCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uUAUCCACUUAACUCCUG
NC_005275_W_4978_5045_p   AGAAGUUUAGGUU...AAACUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAACUUCUG
NC_005277_W_4982_5049_p   AGGAGUUUAGGUU...AAAUAA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uGAUCUACUUAACCCCUG
NC_005274_W_4978_5045_p   AGAAGUUUAGGUU...AAAUUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAACCCACUUAACUUCUG
NC_005273_W_4983_5050_p   AGAAGUUUAGGUU...AAACUA..GACCAAGAGCCUUCAAAGCCCUAAGUAAGUA...cAAUCCACUUAACUUCUG
NC_000889_W_4956_5022_p   AGAGGUUUAGGUU...-ACCUA..GACCAAGAGCCUUCAAAGCUCCAAGCAAGUA...uAUAUUACUUAAUCUCUG
NC_012098_W_4947_5013_p   AGGAAUUUAGGUU...-AAACA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uGAUUUACUUAAUUCCUG
NC_007441_W_4947_5013_p   AGGAAUUUAGGUU...-AAACA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAAUUCCUG
NC_012346_W_5306_5372_p   AGGAAUUUAGGUU...-AAACA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAAUUUACUUAAUUCCUG
NC_006380_W_5840_5906_p   AGGAAUUUAGGUU...-AAACA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAAUUUACUUAAUUCCUG
NC_005971_W_5311_5377_p   AGGAAUUUAGGUU...-AAACA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAAUUUACUUAAUUCCUG
NC_012706_W_5309_5375_p   AGGAAUUUAGGUU...-AAACA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAAUUUACUUAAUUCCUG
NC_006853_W_5308_5374_p   AGGAAUUUAGGUU...-AAACA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAAUUUACUUAAUUCCUG
NC_006295_W_5323_5389_p   AGGAAUUUAGGUU...-AAACA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAAUUUACUUAAUUCCUG
NC_013069_W_4949_5015_p   AGGAAUUUAGGUU...-AAAUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUCACUUAAUUCCUG
NC_005044_W_4948_5014_p   AGGACUUUAGGUU...-AAAUA..GACGAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAAUUCCUG
NC_012096_W_4947_5013_p   AGGAAUUUAGGUU...-AAACA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uGAUUUACUUAAUUCCUG
NC_013751_W_4934_5000_p   AGGAAUUUAGGUU...-AAACA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAAUUCCUG
NC_010640_W_4947_5013_p   AGGAAUUUAGGUU...-AAACA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAAUUCCUG
NC_001941_W_4952_5018_p   AGGAAUUUAGGUU...-AAACA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAAUUCCUG
NC_007704_W_4966_5033_p   AGGAGUUUAGGUU...AAUCUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAAUAUACUUAACUCCUG
NC_006993_W_4946_5013_p   AGGAGUUUAGGUU...AACCCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAAUAUACUUAACUCCUG
NC_008462_W_4954_5021_p   AGGAGUUUAGGUU...AACCCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAACAUACUUAACUCCUG
NC_007179_W_4955_5022_p   AGGAGUUUAGGUU...AACCUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAAUAUACUUAACUCCUG
NC_006973_W_4948_5015_p   AGGAGUUUAGGUU...AACCCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAAUAUACUUAACUCCUG
NC_008414_W_4956_5023_p   AGGAGUUUAGGUU...AACCUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAAUAUACUUAACUCCUG
NC_011821_W_4946_5012_p   AGGAGUUUAGGUU...-ACCUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...aACUAUACUUAACUCCUG
NC_008749_W_4944_5011_p   AGGAGUUUAGGUU...AACCCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAAUUUACUUAACUCCUG
NC_004069_W_4948_5015_p   AGGAGUUUAGGUU...AGCCUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUAUACUUAACUCCUG
NC_008491_W_4949_5016_p   AGGAGUUUAGGUU...AGCCUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUAUACUUAACUCCUG
NC_007703_W_4946_5013_p   AGGAGUUUAGGUU...AAUCCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...gAACGUACUUAACUCCUG
NC_012100_W_4950_5016_p   AGGAAUUUAGGUU...-AAAUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAAUUCCUG
NC_012694_W_4948_5014_p   AGGAAUUUAGGUU...-AAAUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAAUUCCUG
NC_013753_W_4948_5014_p   AGGAAUUUAGGUU...-AAAUA..GACCAAGAGCCUUCAAAGCCCUAAGUAAGUA...uAAUUUACUUAAUUCCUG
NC_008830_W_6234_6301_p   AGGAAUUUAGGUU...AACACA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUA...cAAAGUACUUAACUCCUG
NC_000845_W_6129_6196_p   AGGAAUUUAGGUU...AACACA..GACCAAGAGCCUUCAAAGCUCUAAGUAAGUA...cAAAGUACUUAACUCCUG
NC_012095_W_4953_5020_p   AGGAAUUUAGGUU...AACACA..GACCAAGAGCCUUCAAAGCUCUAAGUAAGUA...cAAAGUACUUAACUCCUG
NC_012103_W_4945_5012_p   AGGAAUUUAGGCU...AAAUCA..GACCAGGAGCCUUCAAAGCCCCAAGCAAGUA...cAAAAUACUUAAUUCCUG
NC_009628_W_4951_5018_p   AGGAAUUUAGGCU...AAAUCA..GACCAAGAGCCUUCAAAGCUCUAAGUAAGUA...cACAAUACUUAAUUCCUG
NC_009849_W_4949_5016_p   AGGAAUUUAGGCU...AGACCA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUA...cAUAAUACUUAAUUCCUG
NC_009629_W_4950_5017_p   AGGAAUUUAGGCU...AAACCA..GACCAAGAGCCUUCAAAGCUCUAAGUAAGUA...cACAAUACUUAAUUCCUG
NC_012102_W_4953_5019_p   AGGAAUUUAGGUU...AAACUA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUA....CAAAUACUUAAUUCCUG
NC_011822_W_4953_5019_p   AGGAAUUUAGGUU...AAACUA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUA....CAAAUACUUAAUUCCUG
NC_002504_W_4947_5012_p   AGGGAUUUAGGUU...-AACUA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUA....CAAAUACUUAAUUCCUG
NC_013558_W_4953_5019_p   AGGAAUUUAGGUU...AAACCA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUA....CAAAUACUUAAUUCCUG
NC_002612_W_4959_5027_p   AGGAGUUUAGGUU..aAACACA..GACCAAGAGCCUUCAAAGCCCUAAGUAAAUG...cAAUACAUUUAACUCCUG
NC_002619_W_4962_5030_p   AGGAAUUUAGGUU..aAACACA..GACCAAGGGCCUUCAAAGCCCUAAGUAAAUG...cAGCACGUUUAAUUCCUG
NC_007393_W_4960_5028_p   AGAAACUUAGGUU..aACAAAA..GACCAAGAGCCUUCAAAGCUCUAAGUAAAUG...gACUACAUUUAGUUUCUG
NC_006925_W_4961_5028_p   AGGAGUUUAGGUU...AGCCUA..GACCAAGAGCCUUCAAAGCUCUAAGCAAAUA...gCAUAUAUUUAACUCCUG
NC_002009_W_4947_5014_p   AGGAGCUUAGGUU...AACCCA..GACCAAGAGCCUUCAAAGCUCUAAGUAAAUA...aUAGAUAUUUAGCUCCUG
NC_011304_W_4964_5032_p   AGGAAUUUAGGUU...AAACUA..GACCAAGAGCCUUCAAAGCUCUAAGUAAAUGa..aCACACAUUUAAUUCCUG
NC_005433_W_4963_5031_p   AGGAAUUUAGGUU...AAUAUA..GACCAAGAGCCUUCAAAGCUCUAAGCAAAUGa..gUGUACAUUUAAUUCCUG
NC_005434_W_4963_5031_p   AGGAAUUUAGGUU...AAUUUA..GACCAAGAGCCUUCAAAGCUCUAAGCAAAUGa..gUGUACAUUUAAUUCCUG
NC_002626_W_4946_5012_p   AGAAGUUUAGGUU...-AUAUA..GACCAGAAGCCUUCAAAGCCUCAAGAAAAUA...cUAUUUAUUUAACUUCUG
NC_005436_W_4947_5014_p   AGGAGUUUAGGUU...ACUUUA..GACCAGAGGCCUUCAAAGCCUCAAGAAAAUA...uUAUUUAUUUAACUUCUG
NC_002080_W_4954_5020_p   AGAAAUUUAGGCU...-AAAUA..GACCAAGAGCCUUCAAAGCUCUAAGUAGACA...aACCCCGUCUAAUUUCUG
NC_005033_W_4978_5046_p   AGGAAUUUAGGUU...A--AAA..GACCAAGAGCCUUCAAAGCCCUAAGUAGAUAuuaaUAUAAAUCUAAUUCCUG
NC_002808_W_4953_5018_p   AGAAGUUUAGGUU...-AAAUA..GACCAAGAGCCUUCAAAGCCCUAAGUAGAUU....AAUUUAUCUAACUUCUG
NC_006893_W_4957_5024_p   AGAAGUUUAGGUU...AGACUA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUA...aAUUUUACUUAACUUCUG
NC_003040_W_4978_5046_p   AGGAAUUUAGGUU...AGAUCA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUAg..uUACUCACUUAAUUCCUG
NC_005435_W_4959_5026_p   AGGAAUUUAGGUU...AAAACA..GACCAAGGGCCUUCAAAGCCCUAAGCAAGUA...uAAUUUACUUAAUUCCUG
NC_008156_W_4970_5036_p   AGAAGUUUAGGUU...AACUUA..GACCAAGAGCCUUCAAAGCCCUAAGUAAGUA....AUAAUACUUAACUUCUG
NC_005035_W_4983_5050_p   AGGAGUUUAGGUU...AAGCAA..GACCAAGGGCCUUCAAAGCCCUAAGCAAGUA...cAAUUUACUUAACUCCUG
NC_002391_W_4970_5037_p   AGGAGUUUAGGUU...ACACCA..GACCAAGGGCCUUCAAAGCCCUAAGCAAGUA...cAAUUUACUUAACUCCUG
NC_005034_W_4973_5041_p   AGGAGUUUAGGUU..aCCAUCA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUA...uAAUUUACUUAACUCCUG
NC_001788_W_4974_5042_p   AGGAAUUUAGGUUa.aCAUCCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUG....UAUUCACUUAAUUCCUG
NC_001640_W_4976_5045_p   AGGAAUUUAGGUUaacAUCCCA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUG....AAUCCACUUAAUUCCUG
NC_001808_W_4969_5036_p   AGGAAUUUAGGUU...ACACCA..GACCAAGGACCUUCAAAGCCCUAAGCAAGUA...cAAACUACUUAAUUCCUG
NC_012681_W_4972_5039_p   AGGAAUUUAGGUU...ACACCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAAAUUACUUAAUUCCUG
NC_012684_W_4972_5039_p   AGGAAUUUAGGUU...ACACUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...cAAAUUACUUAAUUCCUG
NC_012682_W_4970_5037_p   AGGAAUUUAGGUU...ACACCA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAAUCACUUAAUUCCUG
NC_012683_W_4971_5038_p   AGGAAUUUAGGUU...ACACCA..GACCAAGGGCCUUCAAAGCCCCAAGCAAGUA...uAAAUUACUUAAUUCCUG
NC_001779_W_4970_5037_p   AGGAAUUUAGGUU...ACACUA..GACCAAGAGCCUUCAAAGCCCUAAGCAAGUA...uAAACUACUUAAUUCCUG
NC_004027_W_4934_4997_p   AGAAAUUUAGGUU...-ACACA..GACCAA-GGCCUUCAAAGCCCUAAGCAAGUA....-UAACACUUAAUUUCUG
NC_006923_W_4977_5045_p   AGGAGUUUAGGAUa.aCAAACA..GACCGAGAGCCUUCAAAGCCCUAAGCAAGUA....UACAUACUUAACCCCUG
NC_001821_W_4967_5034_p   AGGGAUUUAGGUU...AGACAA..GACCAAGAGCCUUCAAAGCCCUUAGCAAGUA...aAAAUUACUUAAUCCCUG
NC_006924_W_4972_5039_p   AGGAGUUUAGGAU...AACAGA..GACCGAGAGCCUUCAAAGCCCUAAGCAAGUA...cAAAACACUUAACUCCUG
NC_004032_W_4949_5017_p   AGAGGCUUAGGUU...AGCCGA..GACCAAGAGCCUUCAAAGCUCUAAGCAAGUAu..uAAAUUACUUAGCCCCUG
NC_007630_W_5085_5154_p   AAAGGCUUAGGUU..cAAACUA..GACCAAAGGCCUUCAAAGCCUUAAGCAAGUGu..uAAAUCACUUAGCCUUUG
NC_006523_W_5093_5162_p   AAAGGCUUAGGAU..cAAACCA..GACCAAAGGCCUUCAAAGCCUUAAGCAGGCGu..uAAACCGCCUAGCCUUUG
NC_007631_W_5101_5170_p   AAAGGCUUAGGUU..cAAACUA..GACCAAAGGCCUUCAAAGCCUUAAGCAGGUGu..uAAAUCACCUAGCCUUUG
NC_006517_W_5094_5163_p   AAAGGCUUAGGUU..cAAACUA..GACCAAAGGCCUUCAAAGCCUUAAGCAGGUGu..uAAACCACCUAGCCUUUG
NC_011949_W_5264_5333_p   AAAGGCUUAGGUU..cAACCUA..GACCAAAGGCCUUCAAAGCCUUAAGCAGGUGu..cAAAUCGCCUAGCCUUUG
NC_011944_W_6040_6109_p   AAAGGCUUAGGAU..aAACUUA..GACCGAAGGCCUUCAAAGCCUUAAGCAGAUGu..aUAAUCGUCUAGCCUUUG
NC_001610_W_5097_5167_p   AAAGGCUUAGGAUu.aAUAUUA..GACCAAAGGCCUUCAAAGCCUUAAGCAGGUGa..uAAACCACCUAGCCUUUG
NC_006299_W_5116_5187_p   AAAGGCUUAGGAUa.aAAUCUA..GACCGAAGGCCUUCAAAGCCUUAAGCAGGUGa.uaAAUCCACCUAGCCUUUA
NC_008145_W_5080_5149_p   AAAGGUUUAGGUU..aAAUACA..GACCAAAGGCCUUCAAAGCCUUAAGCAGAUGa..uAACCCAUCUAACCUUUG
NC_008136_W_5080_5150_p   AAAGGUUUAGGUUc.aACCUUA..GACCAAAGGCCUUCAAAGCCUUAAGCAGGUGu..cAAACCACCUAACCUUUG
NC_008447_W_5092_5163_p   AAAGGUUUAGGUUcaaGCUUUA..GACCAAAGGCCUUCAAAGCCUUAAGCAGGUGu..cAAAUCACCUAACCUUUG
NC_001794_W_5090_5161_p   AAAGGUUUAGGUUcaaCCUCUA..GACCAAAGGCCUUCAAAGCCUUAAGCAGGUGu..uAAAUCACCUAGCCUUUG
NC_008134_W_5092_5163_p   AAAGGUUUAGGUU..cAAACUAcaGACCAAAGGCCUUCAAAGCCUCAAGCAGGUGu..uAAACCACCUAACCUUUG
NC_008135_W_5097_5166_p   AAAGGCUUAGGUU..cAAUCAA..GACCAAAGGCCUUCAAAGCCUUAAGCAGAUGu..gAAAUCAUCUAGCCUUUA
NC_003039_W_5076_5145_p   AAAGGUUUAGGUU..cAAACUA..GACCAAAGGCCUUCAAAGCCUUAAGCAGGUGu..uGAAUCACCUAACCUUUG
NC_008133_W_5093_5162_p   AAAGGUUUAGGCU..cAAACCA..GACCAAAGGCCUUCAAAGCCUUAAGCAGGUGu..cUAAGCACCUAACCUUUA
NC_006524_W_5091_5160_p   AAAGGUUUAGGUU..cAACCCA..GACCAAAGGCCUUCAAAGCCUUAAGCAGGUGu..cAAAUCACCUAACCUUUG
NC_006518_W_5078_5147_p   AAAGGCUUAGGUU..cAACUCA..GACCUAAGGCCUUCAAAGCCUUCAGCAGAUGu..aAAUCCAUCUAGCCUUUG
NC_003322_W_5097_5166_p   AAAGGUUUAGGUU..uAAACCA..GACCAAAGGCCUUCAAAGCCUUAAGCAGGUGu..uCAACCACCUAACCUUUG
NC_005828_W_5094_5166_p   AAAGGCUUAGGAUuaaUUUCCA..GACCAAAGGCCUUCAAAGCCUUAAGCAGGUGu.uaAAAUCACCUAGCCUUUG
NC_005829_W_5096_5168_p   AAAGGCUUAGGAUuaaUUCUCA..GACCAAAGGCCUUCAAAGCCUUAAGCAGGUGc.uaAAAUCACCUAGCCUUUG
NC_002746_W_5088_5157_p   AAAGGCUUAGGUU..cAAUAUA..GACCAAAGGCCUUCAAAGCCUUAAGUAGAUGu..uAAAUCAUCUAGCCUUUG
NC_007632_W_5106_5174_p   AAAGGCUUAGGUU...CAACAA..GACCAAAGGCCUUCAAAGCCUUAAGUAGAUGu..uAAAUCAUCUAGCCUUUG
NC_000891_W_5013_5079_p   AAAGGUUUAGGUU...-AAUUA..GACCAAGAGCCUUCAAAGCUCUAAGUAGGUA...aUUAGUACCUAACCUUUG
NC_003321_W_5013_5081_p   AAAGGUUUAGGUU...-AAUUA..GACCAAGAGCCUUCAAAGCUCUAAGUAGGUAu.cuCUCAUGCCUAACCUUUG
NC_006364_W_5017_5085_p   AAAGGUUUAGGUU...-AAUUA..GACCAAGAGCCUUCAAAGCUCUAAGUAGGUAu.cuCUCGUGCCUAACCUUUG
#=GC SS_cons              (((((((,,<<<<...______..>>>>,<<<<<_______>>>>>,,,,<<<<<....____>>>>>))))))):
#=GC RF                   AggauuuUAgGuU...AAauuA..AaCcauuaGcCUUCAAAgCuaaAAAUgagaa....aAaUuucucaaauccUG
#=GC SN                   0000000..1111...........1111.22222.......22222....33333........333330000000.

#=GF CS                   76 columns, 21 paired, 14 covariant; 4 stems
//