# STOCKHOLM 1.0 MAMMALIA Q #=GF AU Infernal 1.0.1 #=GC CS .323345....33............33...53235.......53235....6433.........3346543323.. #=GC BP +++++++..++++............++++.+++++.......+++++....+++++.......++++++++++++. NC_004920_Q_3751_3822_m UAGAAUAUGGUGUa....uaUGGUAGCACGAAGAUUUUUGAAUUCUUAGGUUUAGGUUCGAGUCCUAAAAUUCUAG NC_010304_Q_3748_3819_m UAGAGUAUGGUGUa....uaUGGUAGCACGAAGAUUUUUGAAUUCUUAGGUUUAGGUUCAAAUCCUAAAAUUCUAG NC_010301_Q_3747_3818_m UAGGGUUUGGUGUa....guUGGUAACACGAAGAAUUUUGAAUUCUUAGAUUUGGGUUCGAGUCCUAUGGCCCUAG NC_004919_Q_3762_3833_m UAGGGCUUGGUGUa....guUGGUAACACGAAGAAUUUUGGAUUCUUAGAUUUGGGUUCGAAUCCUAUGGCUCUAG NC_004921_Q_3741_3811_m UAGAAUGUAGUGUa.....aUGGUAGCACGGAGAAUUUUGAGUUCUUAGGUUUAGGUUCAAGUCCUAAGGUUCUAG NC_004026_Q_3745_3815_m UAGAAUGUAGUGUa.....aUGGUAGCACUAAGAAUUUUGAUUUCUUAAGUUUAGGUUCAAGUCCUAAGGUUCUAG NC_005129_Q_3761_3832_m UAGGAUGUGGUGUa....auUGGUAGCACUGAGAUUUUUGAAUUCUCGAGUUUAGGUUCGAUUCCUGCGAUUCUAG NC_000934_Q_3762_3833_m UAGAACGUGGUGUa....auUGGUAGCACUGAGAUUUUUGAAUUCUCGAGUUUAGGUUCGAUUCCUAUAAUUCUAG NC_009574_Q_3764_3835_m UGGGAUGUAGUGUa....auUGGUAGCACUGAGAUUUUUGAAUUCUCGAGUUCAGGUUCGAUUCCUGUAGUUCUAG NC_007596_Q_3762_3833_m UAGGAUAUGGUGUa....auUGGUAGCACUGAGAUUUUUGAAUUCUCGAGUUUAGGUUCGAUUCCUGCAAUUCUAG NC_003314_Q_3758_3829_m UAGGAUAUGGUGUa....agUGGUAGCACGAAGAUUUUUGAAUUCUUAGGUUUAGGUUCAAAUCCUAUAAUUCUAG NC_010302_Q_3766_3837_m UAGAAUGUGGUGUa....agUGGUAGCACGGAGAUUUUUGAAUUCUUAGGUUUAGGUUCGAAUCCUAUAAUUCUAG NC_002631_Q_3741_3811_m UAGAAUGUAGUGUa.....aUGGUAGCACAGAGAUUUUUGAAGUCUUUAGUUAAGGUUCAAAUCCUAGAAUUCUAG NC_002078_Q_3764_3836_m UAGAAUAUAGUGUag...uuUGGUAGCACGAAGAUUUUUGAGUUCUUAAGAUUAGGUUCGAGACCUAUUAUUCUAG NC_004031_Q_3776_3847_m UAGGAUGUGGUGUa....auGGGUAGCACGGAGAGUUUUGGGUUCUCAGGAGUGGGUUCGAUUCCCAUAAUUCUAG NC_004028_Q_3767_3838_m UAGAGUUUGGUGUa....uuUGGUAGCACGAGGGAUUUUGAGUUCCUAAGAGUAGGUUCAAGGCCUAUAGUUCUAG NC_001913_Q_3771_3842_m UAGAGCUUGGUGUa....caUGGUAGCACGAAGAAUUUUGAGUUCUUGAGAGUGGGUUCAAGUCCUAUAGCUCUAG NC_003033_Q_3771_3842_m UAGAGUGUGGUGUa....gaGGGUAGCACGGAGAAUUUUGAGUUCUCAGGGAUGGGUUCGAGGCCCAGGGCUCUAG NC_011029_Q_3768_3839_m UAGAGUGUGGUGUa....guUUAUUGCACGGAGAAUUUUGAGUUCUCAGGGAUAGGUUCCAGACCUAGGGCUCCAG NC_005358_Q_3766_3837_m UAGAGUGUGGUGUa....guGGGUAGCACGGAGAAUUUUGAGUUCUCAGGGGUGGGUUCGAGACCCAGAGCUCUAG NC_000884_Q_3745_3815_m UAGAAUAUAGUGUa.....aUGGUAGCACAAAGAAGUUUGAGUUCUUUAGAUUAGGUUCAAGUCCUAUGAUUCUAG NC_002658_Q_3779_3850_m UAGAAUAUGGUGUa....auUGGUAGCACGGAGAAAUUUGAAUUCUUUGGAUUAGGUUCAAUUCCUAUAAUUCUAG NC_009056_Q_3767_3838_m UAGAAUAUGGUGUa....uuUGGUAGCACGAAGAUUUUUGAAGUCUUAAGAUUGGGUUCAAGACCUAAGGUUCUAG NC_005314_Q_3777_3849_m UAGAAUGUAGUGUaa...ugAGGUAGCACGAAGAUUUUUGAAUUCUUAAGGGUAGGUUCAAGUCCUACUGUUCUAG NC_001892_Q_3743_3816_m UAGAAUAUGGUGUau..gauUGGUAGCACGAAGAAUUUUGAAUUCUUAGGGUAAGGUUCGAUUCCUUUGAUUCUAG NC_013571_Q_3754_3825_m UAGAAUGGGGUGUa....acGGGUAGCACGGAGAACUUUGGAUUCUCAGGUAUAGGUUCGAUUCCUAUUGUUCUAG NC_003041_Q_3746_3816_m UAGAACGGAGUGUa.....uGGGUAGCACGGGGAACUUUGGAUUCUCAAGUAUAGGUUCAAUUCCUAUUGUUCUAG NC_008064_Q_3747_3818_m UAGAAUGGGGUGUa....auGGGUAGCACGGAGAAUUUUGGAUUCUCAGGUAUAGGUUCGAUUCCUAUUGUUCUAG NC_013563_Q_3746_3817_m UAGAAUGGAGUGUa....auUGGUAGCACGGAGAAUUUUGGAUUCUCAGGUAUAGGUUCAAUUCCUGUUGUUCUAG NC_007936_Q_3754_3824_m UAGGGUGUAGUACa.....uAGGUAGUACGUAGAAUUUUGAAUUCUGAAAUGUAGGUUCAAUUCCUAUCGCUCUAG NC_013276_Q_3760_3830_m UAGGAUGAAGUAUa.....uUGGUAUUACAUAGAAUUUUGAAUUCUAAGAGGUGGGUUCAAUUCCUACUGUCCUAG NC_013068_Q_14933_15003_m UAGAGUGAAGUGCa.....uGGGUAGUACGUAGAACUUUGAAUUCUAAAGUGCAGGUUCAACUCCUGUUGCUCUAG NC_005089_Q_3772_3842_m UAGGAUAAGGUGUu.....uAGGUAGCACGGAGAAUUUUGAAUUCUUAAGUGUAGGUUCAAUUCCUAUUGUCCUAG NC_012387_Q_3772_3842_m UAGGAUAAGGUGUu.....uAGGUAGCACGAAGAAUUUUGAAUUCUUAAGUAUAGGUUCAAUUCCUAUUGUCCUAG NC_006914_Q_3772_3842_m UAGGAUAAGGUGUu.....uAGGUAGCACGGAGAAUUUUGAAUUCUUAAGUGUAGGUUCAAUUCCUAUUGUCCUAG NC_006915_Q_3773_3843_m UAGGAUAAGGUGUu.....uAGGUAGCACGAAGAAUUUUGAAUUCUUAAGUGUAGGUUCAAUUCCUAUUGUCCUAG NC_010339_Q_3773_3843_m UAGGAUAAGGUGUu.....uAGGUAGCACGAAGAAUUUUGAAUUCUUAAGUGUAGGUUCAAUUCCUAUUGUCCUAG NC_010650_Q_3768_3838_m UAGGAUAAGGUGUu.....uAGGUAGCACGAAGAAUUUUGAAUUCUUAAGUGUAGGUUCAAUUCCUAUUGUCCUAG NC_012389_Q_3757_3827_m UAGGAUAGGGUGUa.....uUGGUAGCACGGAGAAUUUUGAAUUCUUAGGUGUAGGUUCAAUUCCUAUUGUCCUAG NC_001665_Q_3761_3831_m UAGGAUAGGGUGUa.....uUGGUAGCACGGAGAAUUUUGAAUUCUUAGGUGUAGGUUCAAUUCCUAUUGUCCUAG NC_012461_Q_3761_3831_m UAGGAUGGGGUGUa.....uUGGUAGCACGAAGAAUUUUGAAUUCUUAAGUGUAGGUUCAAUUCCUAUUAUCCUAG NC_012374_Q_3759_3829_m UAGGAUAGGGUGUa.....uUGGUAGCACGAAGAAUUUUGAAUUCUUAGGUGUAGGUUCAAUUCCUAUUGUCCUAG NC_011638_Q_3756_3826_m UAGGAUAGGGUGUa.....uUGGUAGCACGAAGAAUUUUGAAUUCUUAGGUGUAGGUUCAAUUCCUAUUGUCCUAG NC_005315_Q_3762_3832_m UAGAAUUUGGUGUa.....aUGGUAGCACGAAGGUUUUUGAGACCUUAGGUAUAGGUUCGAUGCCUGAAGUUCUAG NC_002369_Q_3778_3849_m UGGGAUUUAGUGUa....uaAGGUAGCACGAAGAAUUUUGAAUUCUUAAGGUUAGGUUCAAAUCCUAUUAUUCCAG NC_007009_Q_3753_3824_m UAGGAUAGGGUGUg....uuAGGUAGCACGGAGAAGUUUGGAUUCUCAGGGGUAGGUUCAAUGCCUGCGAUCUUAG NC_009747_Q_3750_3821_m UAGGAUAGGGUGUg....uuAGGUAGCACGGAGAAGUUUGGGUUCUCAGGGGUAGGUUCAAUGCCUGCAAUCUUAG NC_008066_Q_4324_4395_m UAGGAUGGGGUGUg....uuAGGUAGCACGGAGAAGUUUGGAUUCUCAGGGGUAGGUUCAAUGCCUGCAAUCUUAG NC_009748_Q_3747_3818_m UAGGAUAGGGUGUg....uuAGGUAGCACGGAGAAGUUUGGAUUCUCAGGGGUAGGUUCAAUGCCUGCAAUCUUAG NC_005943_Q_4280_4351_m UAGGAUAGAGUGUg....uaGGGUAGCACGGAGAAGUUUGGAUUCUCAGGGGUAGGUUCGAUACCUACAGUCCUAG NC_002764_Q_3745_3816_m UAGGAUGGGGUGUa....ugAGGUAGCACGGAGAAGUUUGGGUUCUCAGGGGUAGGUUCGAUACCUACAGUCCUAG NC_001992_Q_3756_3827_m UAGGAUGGAGUGUg....agGGGUAGCACGGAGAAGUUUGGAUUCUCAGGAGCAGGUUCGAUGCCUGUAAUCCUAG NC_006901_Q_3755_3826_m UAGAACAAGGUGUa....auGGGUAGCACGGAGAAAUUUGGGUUCUCAGGAGUAGGUUCGAUACCUAUGGUUCUAG NC_008216_Q_3755_3826_m UAGAGUUGGGUGUa....auAGGUAGCACGGAGAAAUUUGGAUUCUCAGGAGUAGGUUCAAUACCUAUGAUUCUAG NC_008219_Q_3749_3820_m UAGAAUGGGGUGUa....auAGGUAGCACGGAGGAGUUUGGAUCCUCAGGGGUAGGUUCAAUGCCUAUAAUUCUAG NC_008217_Q_3746_3817_m UAGAAUUGGGUGUa....auAGGUAGCACGGAGAAGUUUGAAUUCUCAGGGGUAGGUUCAAUGCCUAUGAUUCUAG NC_008220_Q_3747_3818_m UAGAAUGAGGUGUa....auAGGUAGCACGGAGAGAUUUGGAUUCUCAGGAGUAGGUUCGAUACCUAUAAUUCUAG NC_008218_Q_3755_3826_m UAGAAUGGGGUGUg....auAGGUAGCACGGAGGAAUUUGAAUUCUCAGGGGUAGGUUCGAUACCUAUAAUUCUAG NC_008215_Q_3746_3817_m UAGAAGGAGGUGUa....auAGGUGGCACGGAGAAAUUUGAAUUCUCAGGAGUAGGUUCGAUGCCUAUAUUUCUAG NC_006900_Q_3752_3823_m UAGAAUGAGGUGUg....auAGGUAGCACGGAGGAAUUUGAAUUCUCAGGGGUAGGUUCGAUGCCUAUAAUUCUAG NC_001645_Q_3747_3818_m UAGGAUGGGGUGUg....acAGGUGGCACGGAGAAUUUUGGAUUCUCAGGGAUGGGUUCAAUUCUCAUAGUCCUAG NC_011120_Q_3748_3819_m UAGGAUGGGGUGUg....acAGGUGGCACGGAGAAUUUUGGAUUCUCAGGGAUGGGUUCAAUUCUCAUAGUCCUAG NC_012920_Q_4329_4400_m UAGGAUGGGGUGUg....auAGGUGGCACGGAGAAUUUUGGAUUCUCAGGGAUGGGUUCGAUUCUCAUAGUCCUAG NC_011137_Q_4324_4395_m UAGGAUGGGGUGUg....auAGGUGGCACGGAGAAUUUUGGAUUCUCAGGGAUGGGUUCGAUUCUCAUAGUCCUAG NC_001644_Q_3749_3820_m UAGGAUGGGGUGUg....auAGGUGGCACGGAGAAUUUUGGAUUCUCAGGGAUGGGUUCGACUCUCAUAGUCCUAG NC_001643_Q_3747_3818_m UAGGAUGGGGUGUg....auAGGUGGCACGGAGAAUUUUGGAUUCUCAGGGAUGAGUUCGAUUCUUAUAGUCCUAG NC_002083_Q_3754_3825_m UAGGAUAGGGUGUg....auGGGUGGCACGGAGAAUUUUGGAUUCUCAGGGGUGGGUUCAACUCCCAUAAUCCUAG NC_001646_Q_3751_3822_m UAGGAUGGGGUGUg....auGGGUGGCACGGAGAAUUUUGGAUUCUCAGGGGUGGGUUCAAUUCCCAUAGUCCUAG NC_002082_Q_3746_3817_m UAGAACAGGGUGCg....acGGGUGGCACGGAGAGUUUUGGGUUCUCAGGGAUGGGUUCGACUCCUAUGGUUCUAG NC_002763_Q_3751_3822_m UAGAGUAUGGUGUa....auAGGUAGCACGGAGGAUUUUGAGUUCUUAGGAAUAGGUUCGAGUCCUAUAAUUCUAG NC_012775_Q_3743_3814_m UAGAAUGUGGUGUa....auAGGUAGCACGGAGAUUUUUGAUUUCUCAGGCACGGGUUCGAUUCCUGUAGUUCUAG NC_002811_Q_3767_3839_m UAGAAUAUUGUGUaa...uuGGGUAGCACGAAGAAUUUUGGAUUCUUAAGUAUAGGUUCAAUUCCUGUAAUUCUAG NC_012774_Q_3779_3851_m UAGAAUAUUGUGUaa...uuAGGUAGCACGAAGAAUUUUGAGUUCUUAAGUAUAGGUUCGAUUCCUGUAAUUCUAG NC_010299_Q_3774_3845_m UAGAGUGUGGUGUa....gcGGGUAGCACGAAGAAUUUUGAAUUCUUAAGGGUAGGUUCAAUACCUAUGGCUCUAG NC_012763_Q_3799_3870_m UAGGACUUGGUGUa....uuAGGUAGCACGAAGGAUUUUGAAUUCUUAGGAGUAGGUUCGAUUCCUAGGGUCCUAG NC_002765_Q_3796_3867_m UAGGACUUGGUGUa....uuUGGUAGCACGAAGAAUUUUGAAUUCUUAAGAGUAGGUUCAAGCCCUAAGGUUCUAG NC_012764_Q_3778_3849_m UAGGAUUUGGUGUa....guUGGUGGCACUAAGAAUUUUGAAUUCUUAGGGGUAGGUUCAAGUCCUAUAAUCCUAG NC_011053_Q_3774_3847_m UAGAAUGUGGUGUau..uuuGGGUAGCACGAAGAAUUUUGAAUUCUUAGGGGUAGGUUCAAUUCCUAUUGUUCUAG NC_012766_Q_3769_3842_m UAGAAUAGGGUGUgu..uuuGGGUAGCACGAGGGAUUUUGAAUCCUUAGGAGCAGGUUCAAUUCCUGUAAUUCUAG NC_012769_Q_3769_3842_m UAGAAUAGGGUGUgu..uuuGGGUAGCACGAGGGAUUUUGAAUCCUUAGGAGCAGGUUCAAUUCCUGUAAUUCUAG NC_012771_Q_3767_3840_m UAGAAUAGGGUGUgu..uuuGGGUAGCACGAGGGAUUUUGAAUCCUUAGGAGCAGGUUCAAUUCCUGUAAUUCUAG NC_010300_Q_3768_3841_m UAGAAUAGGGUGUgu..uuuGGGUAGCACGAGGGAUUUUGGAUCCUUAGGAGCAGGUUCAAUUCCUGUAAUUCUAG NC_004025_Q_3764_3837_m UAGAAUAGGGUGUgu..uuuAGGUAGCACGAAGGACUUUGAAUCCUUAAGAGCAGGUUCGAUCCCUGUGAUUCUAG NC_012773_Q_3777_3851_m UAGAAUAUGGUGUaau.uuuGGGUAGCACGAAGGAUUUUGGAUCCUUAGGAGUAGGUUCAAUGCCUAUAAUUCUAG NC_012761_Q_3787_3858_m UAGGAUAUGGUGUa....guAGGUAGCACGGAGAAUUUUGAGUUCUCAGGGGUAGGUUCAAGGCCUGCUGUCCUAG NC_012762_Q_3787_3858_m UAGGAUAGGGUGUg....auAGGUAGCACGGAGAAUUUUGAGUUCUUAAGAGUGGGUUCAAGUCCUAUUAUCCUAG NC_002521_Q_3751_3821_m UAGAAUUUAGUGUa.....uUGGUAGCACGAAGAAUUUUGAAUUCUUAGGAGUAGGUUCAAUCCCUAUAGCUCUAG NC_011124_Q_3777_3849_m UAGGAUUUGGUGUaa...uuGGGUAGCACGAAGAUUUUUGAAUUCUUGGGAUUAGGUUCGAUUCCUAUAGUCCUAG NC_009691_Q_3778_3850_m UAGGAUUUGGUGUaa...uuGGGUAGCACGAAGAUUUUUGAAUUCUUGGGAUUAGGUUCGAUUCCUAUAGUCCUAG NC_008093_Q_3770_3843_m UAGAAUAUAGUGUaa..guuUGGUAGCACGAAGAUCUUUGAAUUCUUAAGAUUAGGUUCGAAGCCUAUUAUUCUAG NC_008092_Q_3770_3843_m UAGAAUAUAGUGUaa..guuUGGUAGCACGAAGAUCUUUGAAUUCUUAAGAUUAGGUUCGAAGCCUAUUAUUCUAG NC_010340_Q_3769_3842_m UAGAAUAUAGUGUaa..guuUGGUAGCACGAAGAUCUUUGAAUUCUUAAGAUUAGGUUCGAAGCCUAUUAUUCUAG NC_002008_Q_3769_3842_m UAGAAUAUAGUGUaa..guuUGGUAGCACGAAGAUCUUUGAAUUCUUAAGAUUAGGUUCGAAGCCUAUUAUUCUAG NC_011218_Q_3771_3844_m UAGAAUAUAGUGUaa..guuUGGUAGCACGAAGAUCUUUGAAUUCUUAAGAUUAGGUUCGAAGCCUAUUAUUCUAG NC_009686_Q_3769_3842_m UAGAAUAUAGUGUaa..guuUGGUAGCACGAAGAUCUUUGAAUUCUUAAGAUUAGGUUCGAAGCCUAUUAUUCUAG NC_013445_Q_3773_3846_m UAGAAUAUGGUGUaa..gcuUGGUAGCACGAAGAUCUUUGAAUUCUUAAGAUUAGGUUCGAAGCCUAUUAUUCUAG NC_013700_Q_3768_3841_m UAGAAUAUGGUGUaa..auuUGGUAGCACGAAGAUCUUUGAAUUCUUAGGAUUAGGUUCAAGCCCUAUUAUUCUAG NC_008434_Q_3771_3844_m UAGAAUAUGGUGUaa..auuUGGUAGCACGAAGAUCUUUGAAUUCUUAGGAUUAGGUUCGAGGCCUAUUAUUCUAG NC_010497_Q_3771_3842_m UAGGAUUUGGUGUa....guGGGUAGCACGAAGAUUUUUGAGUUCUUAGGAUUAGGUUCGAUCCCUAUAAUUCUAG NC_009692_Q_3770_3843_m UAGAAUUUGGUGUag..guuUGGUAGCACGAAGAUUUUUGAGUUCUUAAGGUUAGGUUCGAUUCCUAUAAUUCUAG NC_011358_Q_3769_3842_m UAGAAUUUGGUGUag..guuUGGUAGCACGAAGAUUUUUGAGUUCUUAAGGUUAGGUUCGAUUCCUAUAAUUCUAG NC_012141_Q_3770_3843_m UAGAACUUGGUGUaa..guuUGGUAGCACGAAGAUUUUUGAGUUCUUAGGAUUAGGUUCAAUUCCUGUAGUUCUAG NC_009678_Q_3767_3840_m UAGAAUUUGGUGUaa..guuUGGUAGCACGAAGAUUUUUGAGUUCUUAGGAUUAGGUUCGAUUCCUAUAGUUCUAG NC_011579_Q_3766_3839_m UAGAAUUUGGUGUaa..guuUGGUAGCACGAAGAUUUUUGAGUUCUUAGGAUUAGGUUCGAUUCCUAUAGUUCUAG NC_009677_Q_3767_3840_m 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NC_012682_Q_3784_3856_m UAGAAUGUGGUGUau...uuUGGUAGCACGGAGAUUUUUGAGUUCUUAAGAGUAGGUUCAAUUCCUAUCGUUUUAG NC_012683_Q_3785_3857_m UAGAAUGUGGUGUaa...uuUGGUAGCACGAAGAUUUUUGAGUUCUUAGGAGUAGGUUCAAUUCCUAUGGUUCUAG NC_001779_Q_3784_3856_m UAGAAUGUGGUGUaa...uuUGGUAGCACGAAGAUUUUUGAGUUCUUAGGAGUAGGUUCAAUUCCUAUGGUUCUAG NC_004027_Q_3750_3821_m UAGAUUAUGGUGUa....auUGGUAGCACAGAGAUUUUUGAAUUCUCAGGUAUAGGUUCAACACCUGUUUUUCUAG NC_006923_Q_3790_3863_m UAGAAUAUGGUGUaa..uguGGGGAGCACGGAGGACUUUGAAUUCUCAGGUACGGGUUCGAUUCCUGUAUUUCUAG NC_001821_Q_3783_3855_m UAGAGUGUGGUGUaa...uaUGGUAGCACGGAGAUUUUUGAGUUCUCAAGUGGAGGUUCAAUUCCUGCGACUCUAG NC_006924_Q_3786_3858_m UAGAAUAUGGUGUaa...uaUGGGAGCACGAAGAAUUUUGAGUUCUUAGGUACGGGUUCAAUCCCCGUAUUUCUAG NC_004032_Q_3761_3834_m UAGAAUGUGGUGUaa..aaaUGGAAGCACGGAGAAGUUUGAUUUCUCAGGAGUAGGUUCGACUCCUAUAUUUCUAG NC_007630_Q_3759_3829_m UAGGAUAUAGUGUa.....aUGGAAGCACGAAGGGUUUUGAGCUCUUCGGUGUAGGUUCGAGUCCUGUUGUCCUAG NC_006523_Q_3766_3836_m UAGGAUGUGGUGUa.....aUGGAAGCACAAAGGGUUUUGAGUUCUUUGGUGUAGGUUCGAGUCCUAUCGUUCUAG NC_007631_Q_3773_3843_m UAGGAUGUGGUGUa.....aUGGGAGCACAAAGGGUUUUGAGUUCUUUAAUAUAGGUUCGAUUCCUAUCAUUCUAG NC_006517_Q_3768_3838_m UAGGAUGUGGUGUa.....aUGGGAGCACAGAGGGUUUUGAGUUCUUUGAUGUAGGUUCGAGUCCUAUCAUUCUAG NC_011949_Q_3933_4003_m UAGGAUGUGGUGUa.....aUGGGAGCACAAAGGGUUUUGAGUUCUUUAGUAUAGGUUCAAGUCCUAUUCUCCUAG NC_011944_Q_4699_4769_m UAGAAUAUAGUGUa.....aGGGAAACACAGAGAGUUUUGGAUUCUCAAAUGUAGGUUCGAGUCCUGUUUUUCUAG NC_001610_Q_3763_3833_m UAGAAUAUGGUGUa.....aAGGAAACACAUGGAAUUUUGAGUUCUAUAAUGUAGGUUCAAUUCCUAUUGUUCUAG NC_006299_Q_3777_3847_m UAGAAUGUGGUGUa.....aAGGAAACACGUGGAAUUUUGAGUUCUUAAAUGUGGGUUCAACUCCUACUGUUCUAG NC_008145_Q_3754_3824_m UAGAAUGUGGUGUa.....aAGGAAACACAGAGGAUUUUGGGUUCUUGGAUAUGGGUUCGAGUCCUAUUGUUCUAG NC_008136_Q_3749_3819_m UAGAAUGUGGUGUa.....aAGGAAACACAGAGAAGUUUGAGUUCUCUAAUAUGGGUUCGAAUCCUAUUGUUCUAG NC_008447_Q_3760_3830_m UAGAAUGUGGUGUa.....aAGGAAACACGGAGAAGUUUGAGUUCUUGGAUAUAGGUUCGAAUCCUGUUGUUCUAG NC_001794_Q_3759_3829_m UAGAAUGUAGUGUa.....aAGGAAACACAGAGAAAUUUGAGUUCUUUAAUAUAGGUUCGAGUCCUAUUGUCCUAG NC_008134_Q_3762_3832_m UAGGAUGUGGUGUa.....aAGGAAGCACAGGGGAUUUUGAGUUCUUGAGUGUAGGUUCGAAUCCUAUCGUUCUAG NC_008135_Q_3762_3832_m UAGAAUGUAGUGUa.....aAGGAAACACGGAGGAUUUUGAGUUCUUUGAUAUAGGUUCAAAUCCUAUUGUUCUAG NC_003039_Q_3747_3817_m UAGAAUGUGGUGUa.....aUGGAAACACGUAGAAUUUUGAGUUCUUGGAUAUGGGUUCGAAUCCUAUUGUUCUAG NC_008133_Q_3761_3831_m UAGAAUAUGGUGUa.....aAGGAAGCACGGGGAAUUUUGAGUUCUUUAAUGUGGGUUCGAUUCCUGCUGUUCUAG NC_006524_Q_3759_3829_m UAGAAUAUGGUGUa.....aUGGAAACACAGAGGAAUUUGAGUUCUCUAAUAUGGGUUCAAAUCCUAUUGUUCUAG NC_006518_Q_3750_3820_m UAGAGUAUGGUGUa.....aAGGAAACACUGAGGAUUUUGAGUUCUCGGAUAUGGGUUCAAAUCCUAUUAUUCUAG NC_003322_Q_3765_3835_m UAGAAUGUGGUGUa.....aUGGAAACACAGAGGAUUUUGAGUUCUCUGAUAUGGGUUCGAGUCCUAUUGUUCUAG NC_005828_Q_3768_3838_m UAGAAUGUGGUGUa.....aAGGGAGCACGGAGAAUUUUGAGUUCUUAAAUGUAGGUUCAAUUCCUAUUGUUCUAG NC_005829_Q_3772_3842_m UAGAAUGUGGUGUa.....aAGGAAACACAAAGGAUUUUGAGUUCUUAAAUAUAGGUUCAAUUCCUAUUGUUCUAG NC_002746_Q_3761_3831_m UAGAAUGUGGUGUa.....aUGGAAACACAAAGGAUUUUGAGUUCUUUGAUGUAGGUUCAAGUCCUAUUGUUCUAG NC_007632_Q_3767_3837_m UAGAAUGUGGUGUa.....aUGGAAACACAAAGGAUUUUGAGUUCUUUGAUAUGGGUUCGAGUCCUAUUGUUCUAG NC_000891_Q_3830_3901_m UAGAGUAUAGUGUa....auUGAGAACACAGAAGUUUUUGAAGCUUGAGAUGUAGGUUUAAAUCCUAUUAUUCUAG NC_003321_Q_3831_3902_m UAGAGUAUGGUGUa....auUGAGAGCACGGAGGUUUUUGAAGCCUUAGAUGUAGGUUUAAGUCCUAUUAUUCUAG #=GC SS_cons (((((((,,<<<<......._____>>>>,<<<<<_______>>>>>,,,,<<<<<_______>>>>>))))))): #=GC RF UauaaguUAGUGU.......aaaaAGCACAugaaaUUUUGAuuuucaAgGagguagUUcAAuucuaccacuuauAa #=GC SN 0000000..1111............1111.22222.......22222....33333.......333330000000. #=GF CS 76 columns, 21 paired, 17 covariant; 4 stems //