# STOCKHOLM 1.0 MAMMALIA N #=GF AU Infernal 1.0.1 #=GC CS .223333..3.23.........32.3.42..2.......2..24.......34332.........23343333322.. #=GC BP +++++++..+++e.........e+++.+++++.......+++++.......+++++.........++++++++++++. 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UAGAUUGAGGCCAg.uGUGUUAGGGCGUUUAGCUGUUAACUAAA.AUUU.cGUGGGAUUg..aaCCCCAUCAAUCUAG NC_004032_N_5091_5163_m UAGAUUGAAGCCAg.uUGAUUAGGGUAUUUAGCUGUUAACUAAA.GUUU.cGUGGGAUUa..aaGCCCACCAGUCUAG NC_007630_N_5237_5308_m UAAAUUGAAGCCA..aAUGUUAAGGCGCUUAGCUGUUAACUAAG.AAGU.aGUGGGAUAa..auACCCUCCAGUUUAG NC_006523_N_5222_5293_m UAAAUUGAAGCCA..aAAGCUUAGGCGCUUAGCUGUUAACUAAG.AGUU.aGUGGGAUAa..auACCCUCCAAUUUAG NC_007631_N_5255_5325_m UAAACUGAAGCCA...AAUGUCAGGUGCUUAGCUGUUAACUAAG.AGUU.aGUGGGAUAa..auACCCUCCAGUUUAG NC_006517_N_5241_5312_m UAAACUGAAGCCA..aGUGUUUAGGUGCUUAGCUGUUAACUAAG.AGUU.aGUGGGAUAg..auACCCUCCAGUUUAG NC_011949_N_5411_5482_m UAAAUUGAAGCCU..aAAGCUAGGGCGCUUAGCUGUUAACUAAG.AACA.aGUGGGAUAa..auACCCUCCAAUUUAG NC_011944_N_6166_6237_m UAAACUGAGGCCG..gAUGUUUAGGCGCUUAGCUGUUAACUAAG.AUUU.aGUAGGAUAa..auACCUUCCAGUUUAG NC_001610_N_5254_5325_m UAAAUUGAAGCCG..aAUGUACAGGCGCUUAGCUGUUAACUAAG.AUUU.aGUGGGAUAa..auACCCUCCAGUUUAG NC_006299_N_5266_5336_m UAAACUGAGGCCG...AAAGACAGGCGCUUAACUGUUAAUUAAG.AUAG.aGUGGGAUAa..auACCCACCAGUUUAG NC_008145_N_5230_5301_m UAAAUUGAAGCCA..aAUGUAUAGGCGCUUAGCUGUUAACUAAG.AGUU.aGUAGGGUAa..gaACCUUCCAAUUUAG NC_008136_N_5236_5307_m UAAAUUGAAGCCA..aGAGUUUAGGUGCUUAGCUGUUAACUAAG.AGUU.aGUGGGAUAa..auACCCACCAAUUUAG NC_008447_N_5227_5298_m UAAAUUGAAGCCA..aAAGUCUAGGCACUUAGCUGUUAACUAAG.ACCU.aGUGGGAUAa..auACCCACCAAUUUAG NC_001794_N_5249_5320_m UAAAUUGAAGCCA..aGAGUUCAGGUGCUUAGCUGUUAACUAAG.AGUU.aGUGGGAUAg..auACCCACCAAUUUAG NC_008134_N_5241_5312_m UGAAUUGAAACCA..aGAGUCUAGGUGCUUAGCUGUUAACUAAG.UUUU.aGAGGGAUAg..auACCCUCCAAUUUAG NC_008135_N_5248_5319_m UAAAUUGAAGCCA..aAUGUUUAGGCGCUUAGCUGUUAACUAAG.AGUA.aGUAGGAUAa..auACCUUCCAAUUUAG NC_003039_N_5224_5295_m UAAAUUGAAGCCA..aAUGUUAAGGUGCUUAGCUGUUAACUAAGaAGAA..GUGGGAUAa..aaACCCACCAAUUUAG NC_008133_N_5241_5310_m UAAGUUGAAGCCA...-AUAUUUGGUGCUUAGUUGUUAACUAAG.AGUU.aGUGGGAUAa..acACCCUCCAAUUUAG NC_006524_N_5236_5307_m UAAAUUGAAGCCA..aAUGUUUAGGUGCUUAGCUGUUAACUAAG.AGCA.aGUGGGAUAa..auACCCGCCAAUUUAG NC_006518_N_5225_5296_m UAAGUUGAAGCCA..aAUGUUUAGGCGCUUAGCUGUUAACUAAG.UCCU.aGUGGGAUAa..auACCCUCCAAUUUAG NC_003322_N_5247_5318_m UAAAUUGAAGCCA..aAAGUCAAGGCGCUUAGCUGUUAACUAAG.AAUA.aGUGGGAUAa..auACCCUCCAAUUUAG NC_005828_N_5227_5297_m UAGAUUGAAGCCA...AAGAACAGGCGUUUAGCUGUUAACUAAG.AAGU.aGCAGGGUAg..guUCCUGCCAAUCUAG NC_005829_N_5232_5302_m UAAGCUGAAGCCA...AAUGUUGGGCGCUUAGCUGUUAACUAAG.AAAU.aGUAGGAUAg..aaACCUGCCAGUUUAG NC_002746_N_5232_5303_m UAAAUUGUAGCCA..aAUGUUUAGGCGCUUAGCUGUUAACUAAG.AAAA.aGUGGGAUAa..auACCCUCCAAUUUAG NC_007632_N_5255_5326_m UAAAUUGAAGCCU..aAUGUUUAGGCGCUUAGCUGUUAACUAAG.AGUA.aGUGGGAUAg..auACCCUCCAAUUUAG NC_000891_N_5151_5223_m UAGACUAAGACUUg.cUGGUUAAAGUGUUUAGCUGUUAACUAAA.AUAU.uAUAGGAUCa..agGCCUAUUAGUCUAG NC_003321_N_5152_5224_m UAGAUUAAGACUUg.cUGGUUAAAGUGUUUAGCUGUUAACUAAA.AUUU.uGUAGGAUCa..agGCCUACUAGUCUAG NC_006364_N_5156_5228_m UAGAUUAAGACUUg.cUGGUUAAAGUGUUUAGCUGUUAACUAAA.AUUU.uGUAGGAUCa..agGCCUACUAGUCUAG #=GC SS_cons (((((((,,<<<<...______>>>>,<<<<<_______>>>>>.,,,,..<<<<<___....._>>>>>))))))): #=GC RF uaaauuGaAGCuu...AAuauAaaGCauuUagCUGUUAAcuAaa.AgAu..Gugaguua.....ucucaCCaauuuaG #=GC SN 0000000..1111.........1111.22222.......22222.......33333.........333330000000. #=GF CS 78 columns, 21 paired, 17 covariant; 4 stems //