# STOCKHOLM 1.0          MAMMALIA M
#=GF AU Infernal 1.0.1
#=GC CS                   ..2........2.........2...33.............33.....2222........2222.....2...
#=GC BP                   ++++4++..++++.......++++.+++++.......+++++....+23++........++32+++4++++.
NC_004920_M_3822_3890_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaCAUCCUUCCCGUACUA
NC_010304_M_3820_3888_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_004919_M_3834_3902_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_004921_M_3813_3880_p   AGUAAGGUCAGCUAAAUA-.AGCUACCGGGCCCAUACCCCGGAAAUGUUGGu..uuAACCCUUCCCGUACUA
NC_004026_M_3817_3885_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uuAACCCUUCCCGUACUA
NC_005129_M_3835_3904_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUCGGau.caCACCCCUCCCAUACUA
NC_000934_M_3836_3905_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUCGGau.caCACCCCUCCCAUACUA
NC_009574_M_3838_3907_p   AGUAAGGUCAGCUAAACUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUCGGcu.caCACCCUUCCCGUACUA
NC_007596_M_3836_3905_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUCGGau.uaCACCCCUCCCAUACUA
NC_003314_M_3834_3902_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_010302_M_3842_3910_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_002631_M_3811_3878_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uuAUUCCUUCCCAUACUA
NC_002078_M_3836_3904_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caCAUCCUUCCCGUACUA
NC_004031_M_3849_3917_p   AGUAAGGUCAGUUAAGCA-.AGCUAUUGGGCCCAUACCCCGAAAAUGUUGGuu.caCAUCCUUCCCAUACUA
NC_004028_M_3847_3915_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_001913_M_3851_3919_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_003033_M_3843_3911_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_011029_M_3840_3908_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUAUCCUUCCCGUACUA
NC_005358_M_3838_3907_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_000884_M_3818_3886_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_002658_M_3852_3920_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGau.caUACCCCUCCCCUACUA
NC_005314_M_3850_3918_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.auACCCCUUCCCGUACUA
NC_001892_M_3821_3889_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAGUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_003041_M_3819_3887_p   AGUAAGGUCAGCUAAUAA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaAACCCUUCCCGUACUA
NC_008064_M_3820_3888_p   AGUAAGGUCAGCUAAUAA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaAAUCCUUCCCGUACUA
NC_013563_M_3820_3888_p   AGUAAGGUCAGCUAAUAA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaAACCCUUCCCGUACUA
NC_007936_M_3829_3897_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAACGUUGGuu.uaAAUCCUUCCCGUACUA
NC_013276_M_3833_3901_p   AGUAAGGUCAGCUAAUCA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaAACCCUUCCCGUACUA
NC_013068_M_15008_15076_p AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaAACCCCUCCCGUACUA
NC_005089_M_3845_3913_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAACGUUGGuu.uaAAUCCUUCCCGUACUA
NC_012387_M_3845_3913_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAACGUUGGuu.uaAAUCCUUCCCGUACUA
NC_006914_M_3845_3913_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAACGUUGGuu.uaAAUCCUUCCCGUACUA
NC_006915_M_3846_3914_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAACGUUGGuu.uaAAUCCUUCCCGUACUA
NC_010339_M_3846_3914_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAACGUUGGuu.uaAAUCCUUCCCGUACUA
NC_010650_M_3843_3911_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAACGUUGGuu.uaAAUCCUUCCCGUACUA
NC_012389_M_3831_3899_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuc.uaAAUCCUUCCCGUACUA
NC_001665_M_3835_3903_p   AGUAAGGUCAGCUAACUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuc.uaAACCCUUCCCGUACUA
NC_012461_M_3835_3903_p   AGUAAGGUCAGCUAACUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuc.caAAUCCUUCCCGUACUA
NC_012374_M_3833_3901_p   AGUAAGGUCAGCUAACUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuc.uaAACCCUUCCCGUACUA
NC_011638_M_3830_3898_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuc.uaAACCCUUCCCGUACUA
NC_005315_M_3840_3909_p   AGUAAGGUCAGCUAAAUCAaAGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..cuAAUCCUUCCCGUACUA
NC_002369_M_3852_3920_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGau.uaUACCCUUCCCGUACUA
NC_007009_M_3826_3893_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..caCACCCUUCCCGUACUA
NC_009747_M_3823_3890_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..caCACCCUUCCCGUACUA
NC_008066_M_4397_4464_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..caCACCCUUCCCGUACUA
NC_009748_M_3820_3887_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..caCACCCUUCCCGUACUA
NC_005943_M_4353_4420_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..caCAUCCUUCCCGUACUA
NC_002764_M_3818_3885_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..caCAUCCUUCCCGUACUA
NC_001992_M_3829_3896_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..caCAUCCUUCCCGUACUA
NC_006901_M_3828_3895_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaUACCCUUCCCGUACUA
NC_008216_M_3827_3894_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..cgAACCCUUCCCGUACUA
NC_008219_M_3822_3889_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaUACCCUUCCCGUACUA
NC_008217_M_3819_3886_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaUAUCCUUCCCGUACUA
NC_008220_M_3819_3886_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaUACCCUUCCCGUACUA
NC_008218_M_3828_3895_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaUAUCCUUCCCGUACUA
NC_008215_M_3818_3885_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaUACCCUUCCCAUACUA
NC_006900_M_3825_3892_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaUACCCUUCCCGUACUA
NC_001645_M_3820_3887_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..caCAUCCUUCCCGUACUA
NC_011120_M_3821_3888_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..caCAUCCUUCCCGUACUA
NC_012920_M_4402_4469_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaUACCCUUCCCGUACUA
NC_011137_M_4397_4464_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaUACCCUUCCCGUACUA
NC_001644_M_3822_3889_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaUACCCUUCCCGUACUA
NC_001643_M_3820_3887_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaCACCCUUCCCGUACUA
NC_002083_M_3827_3894_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaUACCCUUCCCGUACUA
NC_001646_M_3824_3891_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaCACCCUUCCCGUACUA
NC_002082_M_3818_3885_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaUACCCUUCCCGUACUA
NC_002763_M_3826_3893_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..ccAAUCCUUCCCGUACUA
NC_012775_M_3818_3885_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaAACCCUUCCCGUACUA
NC_002811_M_3841_3909_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUCGGuu.uaAAUCCUUCCCGUACUA
NC_012774_M_3853_3921_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_010299_M_3854_3922_p   AGUAGGGUCAGCUAAGCA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caCAUCCUUCCCGUACUA
NC_012763_M_3875_3943_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caCAUCCUUCCCAUACUA
NC_002765_M_3871_3939_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_012764_M_3854_3923_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuuuauAUUCCUUCCCGUACUA
NC_011053_M_3851_3919_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_012766_M_3848_3916_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_012769_M_3848_3916_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_012771_M_3844_3912_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_010300_M_3847_3916_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuuuauAUCCUUCCCCGUACUA
NC_004025_M_3843_3911_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_012773_M_3855_3923_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_012761_M_3864_3932_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_012762_M_3864_3932_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_002521_M_3821_3889_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_011124_M_3851_3919_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_009691_M_3852_3920_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_008093_M_3845_3914_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_008092_M_3845_3914_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_010340_M_3844_3913_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_002008_M_3844_3913_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_011218_M_3846_3915_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_009686_M_3844_3913_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_013445_M_3848_3917_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_013700_M_3843_3912_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_008434_M_3846_3915_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_010497_M_3844_3912_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGau.ugCCCCCUUCCCGUACUA
NC_009692_M_3845_3913_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_011358_M_3844_3912_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_012141_M_3845_3913_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_009678_M_3842_3910_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_011579_M_3841_3909_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUCCCCUUCCCGUACUA
NC_009677_M_3842_3910_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUUCCCUUCCCGUACUG
NC_011125_M_3846_3914_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUUCCCUUCCCGUACUA
NC_004029_M_3851_3919_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.aaCUCCCUUCCCAUACUA
NC_008417_M_3854_3922_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.aaUCCCCUUCCCAUACUA
NC_008420_M_3856_3924_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.aaUCCCCUUCCCAUACUA
NC_008415_M_3852_3920_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.aaCCCCCUUCCCAUACUA
NC_004030_M_3855_3923_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.aaUCCCCUUCCCAUACUA
NC_008419_M_3858_3926_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.aaUCCCCUUCCCAUACUA
NC_008418_M_3853_3921_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.aaUCCCCUUCCCAUACUA
NC_008416_M_3857_3925_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.aaUCCCCUUCCCAUACUA
NC_008427_M_3842_3910_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_008426_M_3848_3916_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_001602_M_4750_4818_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUUCCCUUCCCGUACUA
NC_008425_M_3849_3917_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_008424_M_3850_3918_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_008423_M_3851_3919_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_008422_M_3850_3918_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.aaCUCCCUUCCCGUACUA
NC_008421_M_3856_3924_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaCCCCCUUCCCGUACUA
NC_008428_M_3844_3912_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUUCCCUUCCCGUACUA
NC_008429_M_3842_3910_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUUCCCUUCCCGUACUA
NC_008430_M_3842_3910_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_001325_M_4776_4844_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_008431_M_3845_3913_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUUCCCUUCCCGUACUA
NC_008433_M_3842_3910_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUUCCCUUCCCGUACUA
NC_008432_M_3844_3912_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUUCCCUUCCCGUACUA
NC_009126_M_6300_6368_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCAUACUA
NC_009492_M_5212_5280_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCAUACUA
NC_011116_M_4709_4777_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCAUACUA
NC_009968_M_4737_4805_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCAUACUA
NC_009970_M_4769_4836_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAGAAUGUUGGu..uaUCCCCUUCCCGUACUA
NC_009969_M_4715_4783_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCAUACUA
NC_003426_M_4796_4863_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaUCCCCUUCCCGUACUA
NC_003427_M_4988_5056_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_003428_M_4984_5052_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_011112_M_4731_4799_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUCCCCUUCCCGUACUA
NC_009971_M_4747_4815_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_009331_M_5453_5521_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_008753_M_4821_4889_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_011118_M_5443_5510_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..uaUCCCCUUCCCGUACUA
NC_011117_M_15329_15397_p AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUCCCCUUCCCGUACUA
NC_005212_M_4737_4805_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaCACCCUUCCCAUACUA
NC_001700_M_4712_4780_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_008450_M_4741_4809_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_010641_M_4801_4869_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_010642_M_4775_4843_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaCACCCUUCCCAUACUA
NC_010638_M_4596_4664_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_006835_M_3846_3914_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_005268_M_3865_3933_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUAUCCUUCCCAUACUA
NC_006930_M_3862_3930_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUAUCCUUCCCAUACUA
NC_006931_M_3864_3932_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUAUCCUUCCCAUACUA
NC_005271_M_3874_3942_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCAUACUA
NC_006926_M_3872_3940_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuc.uaUAUCCUUCCCAUACUA
NC_006929_M_3871_3939_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCAUACUA
NC_006928_M_3870_3938_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCAUACUA
NC_007938_M_3869_3937_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_001601_M_4283_4351_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCAUACUA
NC_007937_M_3866_3934_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCCUCCCAUACUA
NC_001321_M_4286_4354_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUAUCCUUCCCAUACUA
NC_006927_M_3879_3947_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaCAUCCUUCCCAUACUA
NC_005270_M_3876_3944_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaCAUCCUUCCCAUACUA
NC_005269_M_3866_3934_p   AGUAAGGUCAGCUAAAUA-.AGCUAUUGGGCCCAUACCCCGAAAAUGUUGGuu.caUAUCCUUCCCAUACUA
NC_012061_M_3868_3936_p   AGUAAGGUCAGCUAAAUA-.AGCUACCGGGCCCAUACCCCGGAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_012062_M_3869_3937_p   AGUAAGGUCAGCUAAAUA-.AGCUACCGGGCCCAUACCCCGGAAAUGUUGGuu.caUAUCCUUCCCAUACUA
NC_005278_M_3869_3937_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGGAAAUGUUGGuu.caUAUCCUUCCCAUACUA
NC_012057_M_3868_3936_p   AGUAAGGUCAGCUAAAUA-.AGCUACCGGGCCCAUACCCCGGAAAUGUUGGuu.uaCACCCUUCCCAUACUA
NC_012051_M_3868_3936_p   AGUAAGGUCAGCUAAAUA-.AGCUACCGGGCCCAUACCCCGGAAAUGUUGGuu.uaUAUCCUUCCCAUACUA
NC_012053_M_3868_3936_p   AGUAAGGUCAGCUAAAUA-.AGCUACCGGGCCCAUACCCCGGAAAUGUUGGuu.uaUAUCCUUCCCAUACUA
NC_012058_M_3868_3936_p   AGUAAGGUCAGCUAAAUA-.AGCUACCGGGCCCAUACCCCGGAAAUGUUGGuu.uaUAUCCUUCCCAUACUA
NC_012059_M_3868_3936_p   AGUAAGGUCAGCUAAAUA-.AGCUACCGGGCCCAUACCCCGGAAAUGUUGGuu.uaUAUCCUUCCCAUACUA
NC_005276_M_3868_3936_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCCUCCCGUACUA
NC_007629_M_3871_3939_p   AGUAAGGUCAGCUAAAUA-.AGCUAUUGGGCCCAUACCCCAAAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_005279_M_3870_3938_p   AGUAAGGGCAGCUAAGUA-.AGCGAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_005280_M_3871_3939_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUACCCUUCCCAUACUA
NC_005272_M_3867_3935_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_002503_M_3874_3942_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_005275_M_3867_3935_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caCACCCUUCCCGUACUA
NC_005277_M_3871_3939_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caCAUCCUUCCCGUACUA
NC_005274_M_3867_3935_p   AGUAAGGUCAGCUAAGUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCAUACUA
NC_005273_M_3872_3940_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_000889_M_3845_3913_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaAACCCCUCCCGUACUA
NC_012098_M_3836_3904_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_007441_M_3836_3904_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUAUCCUUCCCGUACUA
NC_012346_M_4195_4263_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUACCCUUCCCGUACUA
NC_006380_M_4729_4797_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUACCCUUCCCGUACUA
NC_005971_M_4200_4268_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_012706_M_4198_4266_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_006853_M_4197_4265_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_006295_M_4212_4280_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caCAUCCUUCCCGUACUA
NC_013069_M_3838_3906_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.ugUAUCCUUCCCGUACUA
NC_005044_M_3837_3905_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_012096_M_3836_3904_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUAUCCUUCCCGUACUA
NC_013751_M_3823_3891_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUAUCCUUCCCGUACUA
NC_010640_M_3836_3904_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_001941_M_3841_3909_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUAUCCUUCCCGUACUA
NC_007704_M_3855_3923_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_006993_M_3835_3903_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_008462_M_3843_3911_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_007179_M_3844_3912_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_006973_M_3837_3905_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_008414_M_3845_3913_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAAGUUGGuu.uaUACCCUUCCCGUACUA
NC_011821_M_3835_3903_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_008749_M_3833_3901_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_004069_M_3837_3905_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_008491_M_3838_3906_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_007703_M_3835_3903_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_012100_M_3839_3907_p   AGUAAGGUCAGCUAAUUA-.AGCUACCGGGCCCAUACCCCGGAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_012694_M_3837_3905_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_013753_M_3837_3905_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_008830_M_5122_5191_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUAUCCUUCCCAUACUA
NC_000845_M_5017_5086_p   AGUAAGGUCAGCUAAGCUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUACCCUUCCCAUACUA
NC_012095_M_3841_3910_p   AGUAAGGUCAGCUAAGCUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUACCCUUCCCAUACUA
NC_012103_M_3833_3902_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUACCCCUCCCGUACUA
NC_009628_M_3840_3908_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_009849_M_3838_3906_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_009629_M_3839_3907_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_012102_M_3842_3910_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_011822_M_3842_3910_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_002504_M_3836_3904_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_013558_M_3842_3910_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_002612_M_3848_3916_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caCAUCCUUCCCAUACUA
NC_002619_M_3851_3919_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUAUCCUUCCCGUACUA
NC_007393_M_3849_3917_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGGUGGuu.caUAUCCUUCCCGUACUA
NC_006925_M_3850_3918_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_002009_M_3833_3901_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_011304_M_3853_3921_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCGUACUA
NC_005433_M_3852_3920_p   AGUAAGGUCAGCUAAGUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caCAUCCUUCCCGUACUA
NC_005434_M_3852_3920_p   AGUAAGGUCAGCUAAGUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caCAUCCUUCCCGUACUA
NC_002626_M_3835_3903_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.auUACCCUUCCCGUACUA
NC_005436_M_3837_3905_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuc.auCACCCUUCCCGUACUA
NC_002080_M_3837_3905_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCAUACUA
NC_005033_M_3861_3929_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGau.aaUAUCCAUCCCGUACUA
NC_002808_M_3840_3905_p   AGUAAGGUCAGCUAAAUAA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGG.....UUAUAAACCCUUCCCA
NC_006893_M_3846_3914_p   AGUAAGGUAAGCUAAUUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUCGGu..uaAUACCUUCCCCUACUA
NC_003040_M_3867_3935_p   AGUAAGGUAAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUCGGu..uaAUACCUUCCCUUACUG
NC_005435_M_3848_3916_p   AGUAAGGUAAGCUAAAUUA.AGCUAUUGGGCCCAUACCCCGAAAAUGUCGGu..uaAUACCUUCCCUUGCUG
NC_008156_M_3859_3927_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_005035_M_3872_3940_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCGUACUA
NC_002391_M_3859_3927_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUAUCCUUCCCGUACUA
NC_005034_M_3862_3930_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUAUCCUUCCCGUACUA
NC_001788_M_3866_3934_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGau.uaCACCCUUCCCGUACUA
NC_001640_M_3868_3936_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGau.uaCACCCUUCCCGUACUA
NC_001808_M_3858_3926_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGau.uaUACCCUUCCCGUACUA
NC_012681_M_3861_3929_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGau.uaUACCCUUCCCGUACUA
NC_012684_M_3861_3929_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGau.uaUACCCUUCCCGUACUA
NC_012682_M_3859_3927_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGau.uaUACCCUUCCCGUACUA
NC_012683_M_3860_3928_p   AGUAAGGUCAGCUAAGCA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGau.cgUACCCUUCCCGUACUA
NC_001779_M_3859_3927_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGau.aaUACCCUUCCCGUACUA
NC_004027_M_3823_3891_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGau.uaUAUCCUUCCCGUACUA
NC_006923_M_3866_3934_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUACCCCUCCCAUACUA
NC_001821_M_3856_3924_p   AGUAAGGUCAGCUAACAA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUAGGcu.caUACCCUUCCCGUACUA
NC_006924_M_3861_3929_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGgu.caCACCCUUCCCAUACUA
NC_004032_M_3837_3905_p   AGUAAGGUCAGCUAAUUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCAUACUA
NC_007630_M_3829_3896_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGu..ucACACCCUCCCAUACUA
NC_006523_M_3836_3904_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caCACCCUUCCCAUACUA
NC_007631_M_3843_3911_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCAGGCCCAUACCCCGAAAAUGUUGGuu.caCACCCUUCCCAUACUA
NC_006517_M_3838_3906_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUACCCUUCCCAUACUA
NC_011949_M_4003_4072_p   AGUAAGGUCAGCUAAAUUA.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.auAUUCCUUCCCAUACUA
NC_011944_M_4769_4837_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuc.cuUAUCCUUCCCUUACUA
NC_001610_M_3833_3901_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaCAUCCUUCCCAUACUA
NC_006299_M_3847_3915_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.ugCACCCUUCCCAUACUA
NC_008145_M_3824_3892_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caCACCCUUCCCAUACUA
NC_008136_M_3819_3887_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaCAUCCUUCCCAUACUA
NC_008447_M_3830_3898_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caCAUCCUUCCCAUACUA
NC_001794_M_3829_3897_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaCAUCCUUCCCAUACUA
NC_008134_M_3832_3900_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caCACCCUUCCCAUACUA
NC_008135_M_3832_3900_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caCCCCCUUCCCAUACUA
NC_003039_M_3817_3885_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaCAUCCUUCCCAUACUA
NC_008133_M_3831_3899_p   AGUAAGGUCAGCUAAUCA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGua.caUACCCCUCCCAUACUA
NC_006524_M_3829_3897_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caCAUCCUUCCCAUACUA
NC_006518_M_3820_3888_p   AGUAAGGUCAGCUAAAAA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaCACCCUUCCCAUACUA
NC_003322_M_3835_3903_p   AGUAAGGUCAGCUAAACA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.caUCCCCUUCCCAUACUA
NC_005828_M_3838_3906_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaCAUCCUUCCCAUACUA
NC_005829_M_3842_3910_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaCACCCUUCCCAUACUA
NC_002746_M_3831_3899_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_007632_M_3837_3905_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCAUACUA
NC_000891_M_3901_3969_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_003321_M_3902_3970_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUACCCUUCCCAUACUA
NC_006364_M_3906_3974_p   AGUAAGGUCAGCUAAAUA-.AGCUAUCGGGCCCAUACCCCGAAAAUGUUGGuu.uaUAUCCUUCCCAUACUA
#=GC SS_cons              (((((((,,<<<<______.>>>>,<<<<<_______>>>>>,,,,<<<<<.....___>>>>>))))))):
#=GC RF                   aGuaaggUAggcUAAuuaa.AgccauuGGgcUCAUAccCCaaAaAUGgagg.....AuUccucCccuuaCua
#=GC SN                   0000000..1111.......1111.22222.......22222....33333........333330000000.

#=GF CS                   72 columns, 21 paired, 8 covariant; 4 stems
//