# STOCKHOLM 1.0 MAMMALIA L2 #=GF AU Infernal 1.0.1 #=GC CS 3322323..3..3...........3..3.3..32.......23..3........3.222.........222.33232233. #=GC BP +++++++..++++...........++++.+++++.......+++++........+++++.........++++++++++++. NC_004920_L2_2655_2729_p GUUAAGAUGGCAGAGCCAgg.uaaUUGCAUAAAACUUAAACCUUUA.UA.AU.cAGAGGu..ucAAUUCCUCUUCUUAACA NC_010304_L2_2652_2726_p GUUAAGAUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAGCUUUUA.UA.AU.cAGAGGu..ucAACUCCUCUUCUUAACA NC_010301_L2_2652_2726_p GUUAGGGUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAGCUUUUA.UC.CU.cAGAAGu..ucAAAUCCUCUCCCUAACA NC_004919_L2_2667_2741_p GUUGGGGUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAGCUUUUA.UC.CU.cAGAAGu..ucAAAUCCUCUCCCCAACA NC_004921_L2_2645_2719_p GUUAAGAUGGCAGAGCCCgg.uaaUUGCAUAAAAUUUAAGCCUUUA.UA.AU.cAGAGGu..ucAACUCCUCUUCUUAACA NC_004026_L2_2649_2723_p GUUAAGAUGGCAGAGUCCgg.uaaUUGCAUAAAAUUUAAGCCUUUA.UU.CC.cAGAGGu..ucAAUUCCUCUUCUUAACA NC_005129_L2_2665_2739_p GUUAAGAUAGCAAAAAUUgg.ucaCUGCAUAAAACUUAAGCUUUUA.CUcAC..AGAGGu..ucAACUCCUCUUCUUAACA NC_000934_L2_2666_2740_p GUUAAGAUAGCAAAAACUgg.ucaCUGCAUAAAACUUAAGCUUUUA.CUcAC..GGAGGu..ucAACUCCUCUUCUUAACA NC_009574_L2_2668_2742_p GUUAAGGUAGCAAAAACUgg.uuaCCGCAUAAAACUUAAGCUUUUA.CUcAC..GGAGGu..ucAACUCCUCCUCUUAACA NC_007596_L2_2666_2740_p GUUAAGAUAGCAAAAAUUgg.uuaCUGCAUAAAACUUAAGCUUUUAcUU.AC..GGAGGu..ucAACUCCUCUUCUUAACA NC_003314_L2_2660_2734_p GUUAAGAUGGCAGAGACCgg.uaaUUGCGUAAAACUUAAGCCUUUA.UA.AC.cAGAGGu..ucAAUUCCUCUUCUUAACA NC_010302_L2_2668_2742_p GUUAAGAUGGCAGAGACCgg.uaaUUGCGUAAGACUUAAACCUUUA.UA.GC.cAGAGGu..ucAAUUCCUCUUCUUAACA NC_002631_L2_2646_2719_p AUUAAGAUGGCAGAGCCGgu..aaUUGCACAAGACUUAAACCCUUG.CU.GU.cAGAGGu..ucAAUCCCUCUUCUUAAUA NC_002078_L2_2669_2743_p GUUAAGGUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAGCUUUUA.CA.AC.cAGAGGu..ucAAUUCCUCUCCUUAACA NC_004031_L2_2677_2751_p GUUAGGAUGGCAGAGCCCgg.uaaCUGCAUAAAGCUUAAGACUUUA.CA.CC.cAGAGGu..ucAACUCCUCUUCCUAACA NC_004028_L2_2669_2743_p GUUAAGGUGGCAGAGCCCgg.caaUUGCAUAAAACUUAAAACUUUA.UA.AU.cAGAGGu..ucAACUCCUCUCCUUAACA NC_001913_L2_2672_2746_p GUUAAGGUGGCAGAGCCCgg.uaaUUGCGUAAAACUUAAAACUUUA.UA.AC.cAGAGGu..ucAACUCCUCUCCUUAACA NC_003033_L2_2673_2747_p GUUAAGAUGGCAGAGCCCgg.uaaAUGCAUAAAACUUAAAACUUUA.UA.CU.cAGAGGu..ucAACUCCUCUUCUUAACA NC_011029_L2_2670_2744_p GUUAAGAUGGCAGAGCCCgg.uaaAUGCAUAAAACUUAAAACUUUA.UA.CU.cAGAGGu..ucAACUCCUCUUCUUAACA NC_005358_L2_2668_2742_p GUUAAGAUGGCAGAGCCCgg.uaaAUGCAUAAAACUUAAAACUUUA.UA.UU.cAGAGGu..ucAACUCCUCUUCUUAACA NC_000884_L2_2643_2716_p GUUAAGGUGGCAGAGCCGgu..aaUUGCAUAAAAUUUAAGACUUUA.CU.CU.cAGAGGu..ucAACUCCUCUCCUUAACA NC_002658_L2_2668_2742_p GUUAAGGUGGCAGAGCCUgg.caaUUGCAUAAAACUUAAAACUUUA.UA.AU.cAGAGGu..ucAACUCCUCUCCUUAACA NC_009056_L2_2668_2742_p GUUAAGGUGGCAGAGCCCgg.uaaUUGUAUAAAACUUAAAACUUUA.CU.AU.cAGAGGu..ucAAUUCCUCUUCUUAACA NC_005314_L2_2678_2752_p GCUAAGAUGGCAGAGCCCgg.uaaUUGCACAAGACUUAAACCCUUG.AA.UC.cAGAGGu..ucAACUCCUCUUCUUAGCA NC_001892_L2_2645_2719_p GUUAAGGUGGCAGAGCCCgg.uaaUUGCGUAAAACUUAAAACUUUA.UU.UU.cAGAGAu..ucAAAUUCUCUCCUUAACA NC_013571_L2_2658_2732_p AUUAGGGUGGCAGAGCCAgg.aaaUUGCGUAAGACUUAAAACCUUG.UA.CC.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_003041_L2_2651_2725_p AUUAGGGUGGCAGAGUCAgg.aaaUUGCGUAAGACUUAAAACCUUG.UC.CC.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_008064_L2_2652_2726_p AUUAGGGUGGCAGAGCCAgg.aaaUUGCGUAAGAUUUAAAACCUUG.UC.CC.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_013563_L2_2650_2724_p AUUAGGGUGGCAGAGCCAgg.aaaUUGCGUAAGACUUAAAACCUUG.UU.CC.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_007936_L2_2658_2732_p AUUAGGGUGGCAGAGCCCgg.aaaUUGCGUAAGACUUAAACCCUUG.UA.AU.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_013276_L2_2664_2738_p AUUAGGGUGGCAGAGCCCgg.aaaUUGCGUAAGACUUAAAACCUUG.UU.UU.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_013068_L2_13837_13911_p AUUAGGGUGGCAGAGCCCgg.aaaUUGCGUAAGACUUAAACCCUUA.CU.AC.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_005089_L2_2676_2750_p AUUAGGGUGGCAGAGCCAgg.aaaUUGCGUAAGACUUAAAACCUUG.UU.CC.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_012387_L2_2676_2750_p AUUAGGGUGGCAGAGCCAgg.aaaUUGCGUAAGACUUAAAACCUUG.UU.CC.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_006914_L2_2676_2750_p AUUAGGGUGGCAGAGCCAgg.aaaUUGCGUAAGACUUAAAACCUUG.UU.CC.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_006915_L2_2677_2751_p AUUAGGGUGGCAGAGCCAgg.aaaUUGCGUAAGACUUAAAACCUUG.UU.CC.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_010339_L2_2677_2751_p AUUAGGGUGGCAGAGCCAgg.aaaUUGCGUAAGACUUAAAACCUUG.UU.CC.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_010650_L2_2672_2746_p AUUAGGGUGGCAGAGCCAgg.uaaUUGCGUAAGACUUAAAACCUUG.UU.UC.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_012389_L2_2661_2735_p AUUAGGGUGGCAGAGCCAgg.caaUUGCGUAAGACUUAAAACCUUG.UU.CC.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_001665_L2_2665_2739_p AUUAGGGUGGCAGAGCCAgg.uaaUUGCGUAAGACUUAAAACCUUG.UU.CC.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_012461_L2_2665_2739_p AUUAGGGUGGCAGAGCCAgg.uaaUUGCGUAAGACUUAAAACCUUC.UC.CC.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_012374_L2_2663_2737_p AUUAGGGUGGCAGAGCCAgg.uaaUUGCGUAAGACUUAAAACCUUG.UU.CC.cAGGGGu..ucAAAUCCUCUCCCUAAUA NC_011638_L2_2660_2734_p AUUAGGGUGGCAGAGCCAgg.uaaUUGCGUAAGACUUAAAACCUUG.UU.CC.cAGAGGu..ucAAAUCCUCUCCCUAAUA NC_005315_L2_2667_2741_p AUUAGGGUGGCAGAGCUUgg.aaaUUGCAUAAGAUUUAAAACCUUA.UA.AC.cAGAGGu..ucAACUCCUCUCCCUAAUA NC_002369_L2_2677_2751_p AUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAGAUUUAAAACCUUA.CU.AU.cAGAGGu..ucAACUCCUCUUCUUAAUA NC_007009_L2_2655_2729_p GUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAAAUUUAAAAUUUUA.AA.AC.cAGAGGu..ucAACCCCUCUUCUUAACA NC_009747_L2_2653_2727_p GUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAAAUUUAAAAUUUUA.AA.AC.cAGAGGu..ucAACCCCUCUUCUUAACA NC_008066_L2_3226_3300_p GUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAAAUUUAAAAUUUUA.AA.AC.cAGAGGu..ucAACCCCUCUUCUUAACA NC_009748_L2_2649_2723_p GUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAAAUUUAAAAUUUUA.AA.AC.cAGAGGu..ucAACCCCUCUUCUUAACA NC_005943_L2_3182_3256_p GUUAAGAUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAAACUUUG.UA.AC.cAGAGGu..ucAAUUCCUCUUCUUAACA NC_002764_L2_2647_2721_p GUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAAACUUAAAACUUUA.UA.AU.cAGAGGu..ucAACCCCUCUUCUUAACA NC_001992_L2_2658_2732_p GUUAAGAUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAAACUUUA.CA.CC.cAGAGGu..ucAACCCCUCUUCUUAACA NC_006901_L2_2657_2731_p GUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAAACUUAAAACUUUA.UA.AU.cAGAGGu..ucGACUCCUCUUCUUAACA NC_008216_L2_2656_2730_p GUUAAGAUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAGACUUUA.CA.AU.cAGAGGu..ucAAUUCCUCUUCUUAACA NC_008219_L2_2650_2724_p GUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAAACUUAAGAUUUUA.CA.AC.cAGAGGu..ucAACUCCUCUUCUUAACA NC_008217_L2_2647_2721_p GUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAAACUUAAAACUUUA.CA.AC.cAGAGGu..ucAACUCCUCUUCUUAACA NC_008220_L2_2648_2722_p GUUAAGAUGGCAGAGCCCgg.uaaUUGCAUAAAAUUUAAGACUUUA.UA.AU.cAGAGGu..ucAACUCCUCUUCUUAGCA NC_008218_L2_2656_2730_p GUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAAAUUUAAGACUUUA.CA.AU.cAGAGGu..ucAACUCCUCUUCUUAACA NC_008215_L2_2647_2721_p GUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAAACUUAAGACUUUA.CA.AU.cAGAGGu..ucAAUUCCUCUUCUUAACA NC_006900_L2_2653_2727_p GUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAAAUUUAAGACUUUA.UA.AU.cAGAGGu..ucAACUCCUCUUCUUAACA NC_001645_L2_2648_2722_p GUUAAGAUGGCAGAGCCCgg.uaAUcGCAUAAAACUUAAAACUUUA.UA.GU.cAGAGGu..ucAAUUCCUCUUCUUAACA NC_011120_L2_2649_2723_p GUUAAGAUGGCAGAGCCCgg.uaAUcGCAUAAAACUUAAAACUUUA.UA.GU.cAGAGGu..ucAAUUCCUCUUCUUAACA NC_012920_L2_3230_3304_p GUUAAGAUGGCAGAGCCCgg.uaAUcGCAUAAAACUUAAAACUUUA.CA.GU.cAGAGGu..ucAAUUCCUCUUCUUAACA NC_011137_L2_3225_3299_p GUUAAGAUGGCAGAGCCCgg.uaAUcGCAUAAAACUUAAAACUUUA.CA.GU.cAGAGGu..ucAAUUCCUCUUCUUAACA NC_001644_L2_2650_2724_p GUUAAGAUGGCAGAGCCCgg.uaAUcGCAUAAAACUUAAAACUUUA.CA.AU.cAGAGGu..ucAAUUCCUCUUCUUAACA NC_001643_L2_2648_2722_p GUUAAGAUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAAACUUUA.CA.AU.cAGAGGu..ucAAUUCCUCUUCUUGACA NC_002083_L2_2655_2729_p GUUAAGAUGGCAGAGCCCgg.uaaCUGCAUAAAAUUUAAAGCUUUA.CA.GU.cAGAGGu..ucAACUCCUCUUCUUAACA NC_001646_L2_2652_2726_p GUUAAGAUGGCAGAGCCCgg.uaaUUGCAUAAAAUUUAAAGCUUUA.CA.GU.cAGAGGu..ucAACUCCUCUUCUUAACA NC_002082_L2_2647_2721_p GUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAAACUUAAGACUUUA.UA.AU.cAGAGGu..ucAAUCCCUCUUCUUAACA NC_002763_L2_2652_2726_p GUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAAACUUAAAACUUUA.CA.AU.cAGAGGu..ucAACUCCUCUUCUUAACA NC_012775_L2_2644_2718_p GUUAAGAUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAAACUUUA.UA.AC.cAGAGGu..ucAACUCCUCUUCUUAACA NC_002811_L2_2661_2735_p GUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAAACUUAAAACUUUA.UU.AU.cAGAGGu..ucAACUCCUCUUCUUAACA NC_012774_L2_2675_2749_p GUUAAGAUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAAACUUUA.UU.AU.cAGAGGu..ucAAUUCCUCUUCUUAACA NC_010299_L2_2676_2750_p GUUAAGGUGGCAGAGCCCgg.uaaCUGCAUAAAACUUAAAACUUUA.AA.AU.cAGAGGu..ucAAAUCCUCUCCUUACCA NC_012763_L2_2702_2776_p AUUAAGAUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAAACUUUA.UA.AU.cAGAGGu..ucAACUCCUCUUCUUAAUA NC_002765_L2_2699_2773_p GUUAAGAUGGCAGAGCCUgg.uaaUUGCAUAAAACUUAAAACUUUA.UA.CU.cAGAGGu..ucAACUCCUCUUCUUAACA NC_012764_L2_2681_2755_p GUUAAGAUGGCAGAGACCgg.uaaUUGCAUAAAACUUAAAACUUUA.UA.UU.cAGAGGu..ucAACUCCUCUUCUUAACA NC_011053_L2_2674_2749_p GUUAAGAUGGCAGAGCCCgg.caaUUGCAUAAAACUUAAGACUUUA.UA.AAccAGAGGu..ucAAUUCCUCUUCUUAACA NC_012766_L2_2670_2744_p GUUAAGGUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAGACUUUA.CA.AU.cAGAGGu..ucAACUCCUCUCCCUAACA NC_012769_L2_2670_2744_p GUUAAGGUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAGACUUUA.CA.AU.cAGAGGu..ucAACUCCUCUCCCUAACA NC_012771_L2_2668_2742_p GUUAAGGUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAGACUUUA.CA.AU.cAGAGGu..ucAACUCCUCUCCCUAACA NC_010300_L2_2669_2743_p GUUAAGGUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAGACUUUA.CA.AU.cAGAGGu..ucAACUCCUCUCCCUAACA NC_004025_L2_2666_2739_p GUUAAGGUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAGACUUUA.AA.GU.cAGAGGu...cAACUCCUCUCCCUAACA NC_012773_L2_2677_2752_p AUUAAGGUGGCAGAGACCgg.uaaUUGCAUAAAACUUAAGACUUUA.UA.AUucAGAGGu..ucAACUCCUCUCCUUAAUA NC_012761_L2_2690_2764_p GUUAAGAUGGCAGAGCCUgg.caaUUGCAUAAAACUUAAAACUUUA.GA.AA.cAGAGGu..ucAACUCCUCUUCUUAACA NC_012762_L2_2690_2764_p GUUAAGAUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAAACUUUA.CC.AC.cAGAGGu..ucAACUCCUCUUCUUAACA NC_002521_L2_2653_2727_p GUUAAGGUGGCAGAGCCCgg.ucaUUGCCUAAAACUUAAGAUUUUA.AGuAC..AGAAGu..ucAAAUCCUCUCCUUAACA NC_011124_L2_2678_2752_p GUUAGGGUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAACUUUUA.UA.AU.cAGAGGu..ucAAAUCCUCUUCCUAACA NC_009691_L2_2679_2753_p GUUAGGGUGGCAGAGCCCgg.uaaUUGUAUAAAACUUAAACUUUUA.UA.AU.cAGAGGu..ucAAAUCCUCUUCCUAACA NC_008093_L2_2671_2745_p GUUAGGGUGGCAGAGCCCgg.uaaUUGCGUAAAACUUAAACCUUUA.UU.AU.cAGAGGu..ucAAUUCCUCUCCCUAACA NC_008092_L2_2671_2745_p GUUAGGGUGGCAGAGCCCgg.uaaCUGCGUAAAACUUAAACCUUUA.CU.AU.cAGAGGu..ucAAUUCCUCUCCCUAACA NC_010340_L2_2670_2744_p GUUAGGGUGGCAGAGCCCgg.uaaCUGCAUAAAACUUAAACCUUUA.UU.AU.cAGAGGu..ucAAUUCCUCUCCCUAACA NC_011218_L2_2672_2746_p GUUAGGGUGGCAGAGCCCgg.uaaCUGCAUAAAACUUAAACCUUUA.UU.AU.cAGAGGu..ucAAUUCCUCUCCCUAACA NC_009686_L2_2671_2744_p GUUAGGGUGGCAGAGCCGgu..aaCUGCGUAAAACUUAAACCUUUA.CU.AU.cAGAGGu..ucAAUUCCUCUCCCUAACA NC_013445_L2_2673_2747_p GUUAGGGUGGCAGAGCCCgg.uaaUUGCGUAAAACUUAAGCCUUUA.UU.CU.cAGAGGu..ucAACUCCUCUUCCUAACA NC_013700_L2_2669_2743_p GUUAGGGUGGCAGAGCCCgg.uaaUUGCGUAAAACUUAAACCUUUA.UC.CC.cAGAGGu..ucAACUCCUCUCCCUAACA NC_008434_L2_2672_2746_p GUUAGGGUGGCAGAGCCCgg.caaUUGCGUAAGACUUAAACCUUUA.UC.CC.cAGAGGu..ucAAUUCCUCUCCCUAACA NC_010497_L2_2671_2746_p GUUAGGGUGGCAGAGCCCgg.uaaUUGCGUAAAACUUAAAUCUUUA.UU.UAccAGAGGu..ucAAAUCCUCUCCCUAACA NC_009692_L2_2671_2745_p GUUAGGGUGGCAGAGCCCag.uaaUUGCGUAAAACUUAAGCUUUUA.UU.CU.cAGAGGu..ucAAAUCCUCUUCCUAACA NC_011358_L2_2670_2744_p GUUAGGGUGGCAGAGCCCag.uaaUUGCGUAAAACUUAAACUUUUA.UU.CU.cAGAGGu..ucAAAUCCUCUUCCUAACA NC_012141_L2_2671_2745_p GUUAGGGUGGCAGAGCCCag.uaaUUGCGUAAAACUUAAACUUUUA.UU.CC.cAGAGGu..ucAAAUCCUCUUCCUAACA NC_009678_L2_2668_2742_p GUUAGGGUGGCAGAGCCCag.uaaUUGCGUAAAACUUAAACUUUUA.UC.CC.cAGAGGu..ucAAAUCCUCUUCCUAACA NC_011579_L2_2667_2741_p GUUAGGGUGGCAGAGCCCag.uaaUUGCGUAAAACUUAAACUUUUA.UC.CC.cAGAGGu..ucAAAUCCUCUUCCUAACA NC_009677_L2_2668_2742_p GUUAGGGUGGCAGAGCCCag.uaaUUGCGUAAAACUUAAGCUUUUA.UC.CU.cAGAGGu..ucAAAUCCUCUUCCUAACA NC_011125_L2_2672_2746_p GUUAGGGUGGCAGAGCCCag.uaaUUGCGUAAAACUUAAACUUUUA.UU.CU.cAGAGGu..ucAAAUCCUCUUCCUAACA NC_008417_L2_2678_2753_p GUUAGGGUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAACCUUUA.UA.CCccAGAGGu..ucAACUCCUCUCCCUAACA NC_008420_L2_2680_2755_p GUUAGGGUGGCAGAGCCCgg.caaUUGCGUAAAACUUAAACCUUUA.CA.CCucAGAGGu..ucAACUCCUCUCCCUAACA NC_008415_L2_2677_2752_p GUUAGGGUGGCAGAGCCCgg.uaaUUGCAUAAAACUUAAACCUUUA.UA.CCucAGAGGu..ucAACUCCUCUCCCUAACA NC_004030_L2_2679_2754_p 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AUUAAGAUGGCAGAGCUGgu..aaUUGCAUAAAGUUUAAGCCUUUA.CU.CU.cAGAGGu..ucAAGCCCUCUUCUUAAUA NC_006523_L2_2670_2743_p GUUAAGAUGGCAGAGUUGgu..aaUUGCAUAAAGUUUAAGCCUUUA.CU.AC.cAGAGGu..ucAAACCCUCUUCUUAACA NC_007631_L2_2673_2746_p AUUAAGAUGGCAGAGUUGgu..aaUUGCAUAAAGCUUAAGCCUUUA.UU.CC.cAGAGGu..ucAAACCCUCUUCUUAAUA NC_006517_L2_2666_2739_p AUUAAGAUGGCAGAGUUGgu..aaUUGCAUAAAGCUUAAGCCUUUA.AU.CU.cAGAGGu..ucAAACCCUCUUCUUAAUA NC_011949_L2_2837_2910_p GUUAAGGUGGCAGAGCAGgu..aaUUGUAUAAAGCUUAAGCCUUUA.CC.CC.cAGAGGu..ucAAAUCCUCUUCUUAACA NC_011944_L2_3602_3675_p GUUAAGAUGACAGAGUUGgu..aaUUGUAUAAAGCUUAAGUCUUUA.AU.CC.cAGAGGu..ucAAACCCUCUUCUUAACA NC_001610_L2_2666_2739_p AUUAAGGUGGCAGAGAAGgu..aaUUGCAUAAAACUUAAGCUUUUA.UA.CU.cAGAGGu..ucAAACCCUCUCCUUAAUA NC_006299_L2_2680_2753_p AUUAAGGUGGCAGAGCAGgu..aaUUGCAUAAAACUUAAGCCUUUA.CU.AU.cAGAGGu..ucAACCCCUCUCCUUAAUA NC_008145_L2_2658_2730_p AUUAAGGUGGCAGAGUGGu...aaUUGCAUAAAACUUAAACCUUUA.AA.UC.cAGAGGu..ucAACUCCUCUCCUUAAUA NC_008447_L2_2663_2736_p AUUAAGGUGGCAGAGCUGgc..aaUUGCAUAAAACUUAAGCUUUUA.UA.AC.cAGAGGu..ucAAAUCCUCUCCUUAAUA NC_001794_L2_2662_2735_p AUUAAGGUGGCAGAGCCGgc..aaUUGCAUAAAACUUAAACCUUUA.UA.AU.cAGAGGu..ucAAAUCCUCUCCUUAAUA NC_008134_L2_2665_2738_p AUUAAGGUGGCAGAGCAGgc..aaUUGCAUAAAACUUAAGCCUUUA.UA.AC.cAGAGGu..ucAAACCCUCUCCUUAAUA NC_008135_L2_2665_2738_p AUUAAGGUGGCAGAGAUGgu..aaUUGCAUAAAACUUAAACCUUUA.UA.AU.cAGAGGu..ucAACUCCUCUCCUUAAUA NC_003039_L2_2650_2723_p AUUAAGGUGGCAGAGCUGgc..aaUUGCAUAAAACUUAAACCUUUA.UA.AC.cAGAGGu..ucAAAUCCUCUCCUUAAUA NC_008133_L2_2664_2737_p AUUAAGGUGGCAGAGCAGgu..aaUUGCAUAAAACUUAAACCUUUA.UA.AC.cAGAGGu..ucAACCCCUCUCCUUAAUA NC_006524_L2_2662_2735_p GUUAAGGUGGCAGAGCUGgc..aaUUGCAUAAAUCUUAAGCCUUUA.UA.AU.cAGAGGu..ucAAAUCCUCUCCUUAAUA NC_006518_L2_2655_2727_p AUUAAGGUGGCAGAGUGGu...aaUUGCAUAAAACUUAAGCCUUUA.UU.CC.cAGAGGu..ucAAACCCUCUCCUUAAUA NC_003322_L2_2668_2741_p AUUAAGGUGGCAGAGCAGgu..aaUUGCAUAAAACUUAAGCCUUUA.CA.AC.cAGAGGu..ucAAACCCUCUCCUUAAUA NC_005828_L2_2675_2748_p AUUAAGGUGGCAGAGCCAgu..aaUUGCAUAAAAUUUAAGCUUUUA.UC.AC.cAGAGGu..ucAAAUCCUCUCCUUAAUA NC_005829_L2_2678_2751_p AUUAAGGUGGCAGAGCCGgu..aaUUGCAUAAAAUUUAAGCUUUUA.UA.AC.cAGAGGu..ucAAAUCCUCUCCUUAAUA NC_002746_L2_2664_2737_p AUUAAGGUGGCAGAGAUGgc..aaUUGCAUAAAACUUAAGCCUUUA.UU.AU.cAGAGGu..ucAAAUCCUCUCCUUAAUA NC_007632_L2_2671_2744_p AUUAAGGUGGCAGAGAUGgu..aaUUGCAUAAAACUUAAGCCUUUA.UA.AU.cAGAGGu..ucAAAUCCUCUCCUUAAUA NC_000891_L2_2644_2718_p AUUAAGGUGACAGAGACCgg.uaaUUGUGUAAAACUUAAGCUUUUA.UA.GU.cAGAGGu..ucAAAUCCUCUCCUUAAUA NC_003321_L2_2649_2723_p AUUAAGGUGACAGAGACCgg.caaUUGUGUAAAACUUAAGCUUUUA.UA.AU.cAGAGGu..ucAAAUCCUCUCCUUAAUA NC_006364_L2_2651_2725_p AUUAAGGUGACAGAGACCgg.caaUUGUGUAAAACUUAAGCUUUUA.UA.AU.cAGAGGu..ucAAAUCCUCUCCUUAAUA #=GC SS_cons (((((((,,<<<<_____......>>>>,<<<<<_______>>>>>.,,.,,..<<<<<.....____>>>>>))))))): #=GC RF auuaagaUGgCAgAauAa......aUGcguUagAUUUAGGaUcuAa.au.AU..agagg.....aauuccucuucuuaauA #=GC SN 0000000..1111...........1111.22222.......22222........33333.........333330000000. #=GF CS 81 columns, 21 paired, 16 covariant; 4 stems //