# STOCKHOLM 1.0 MAMMALIA G #=GF AU Infernal 1.0.1 #=GC CS 3323343..32.3.............3.23.56.32.......23.65.....33433.........334333433233. #=GC BP +++++++..++++.............++++.+++++.......+++++.....+++++.........++++++++++++. NC_004920_G_9391_9458_p AUUCUUUUAAUAU...AAAUA.....AUAUAGUUGACUUCCAAUCAAU.AAAUUCUGGUCAAc...cCCAGAAAAGAAUA NC_010304_G_9379_9446_p AUUCUUUUAGUAU...AAAUA.....AUAUUACUGACUUCCAAUUAGU.AGAUUUUGGUAAAc...uCCAAAAAAGAAUA NC_010301_G_9387_9454_p AUUCUUUUAGUAC...AAACA.....GUACACCUGACUUCCAAUCAGG.AAAUUUUAGACCAg...cCUAAAAAAGAAUA NC_004919_G_9396_9464_p AUUCUUUUAGUAC..aAACCA.....GUACACCCGACUUCCAAUCAGG.AAAUUUCAGACUAa...uCUGAAAAAGAAUA NC_004921_G_9369_9436_p ACUCUUUUAGUAU...AACCA.....GUACAGUUGACUUCCAAUCAUC.UAGUUUCAGCUCCa...cCUGAAAAAGAGUA NC_004026_G_9373_9441_p ACUCUUUUAGUAU...AAUAA.....GUACAAUUGACUUCCAAUCAAU.UAGAUUCAGCUAUc..ccCUGAAAAAGAGUA NC_005129_G_9385_9454_p AUUUCUUUAGUAUu.aACUUA.....GUAUAACUAACUUCCAAUUAGU.AGGCUUUGGUAGAc...cCCAAAAAGAAAUA NC_000934_G_9385_9454_p AUUUCUUUAGUAUu.aACUUA.....GUAUAACUAACUUCCAAUUAGU.AGGCUUUGGUAAAu...cCCAAAAAGAAAUA NC_009574_G_9391_9459_p AUUUCUUUAGUAUu.aAUCUA.....GUACAACUGACUUCCAAUUAGU.AGGCUUUGGUGGA....cCCAAAAAGAAAUA NC_007596_G_9387_9456_p AUUUCUUUAGUAUu.aACUUA.....GUAUAACUAACUUCCAAUUAGU.AGGCUUUGGCAGAc...uCCAAAAAGAAAUA NC_003314_G_9394_9462_p ACUCUUUUAGUAC..cAAAUA.....GUACGACUGACUUCCAAUCAGU.AAGCCUUGGUCAAa...uCCAAGAAAGAGUA NC_010302_G_9403_9471_p AUUCUUUUAGUAU..uAAAUA.....GUACAACUGACUUCCAAUCAGU.AAGUUUUGGCAACa...cCCAAAAAAGAAUA NC_002631_G_9408_9474_p AUUCUUUUAGUAU...-AUCA.....GUACAGAUGACUUCCAAUUAUC.UAGAUCUAGUCAAa...cCUAGAAAGGAAUA NC_002078_G_9413_9481_p ACCCUCUUAAUAU..aACUAA.....AUAUAACUGACUUCCAAUCAGU.AAAUCCUGGAAAAc...cCCAGGAGAGAGUA NC_004031_G_9412_9480_p AUUCUUUCAGUAU..uAGCUA.....GUACAGUUGACUUCCAAUCAAU.AGGAUCUGGUCAAa...cCCAGAAAAGAAUA NC_004028_G_9413_9482_p ACUCUUUUAGUAU..uAACUA.....GUACAUCUGACUUCCAAUCAGU.UAGUUUUGGUAUAa..auCCAAAAAAGAGUA NC_001913_G_9421_9490_p ACUCUUUUAGUAU..cAACUA.....GUACAGCUGACUUCCAAUCAGU.UAGUUUUGGCUCCa..acCCAAAAAAGAGUA NC_003033_G_9401_9470_p ACUUCCUUAGUAU..aAUUUA.....GUACGACUGACUUCCAAUCAGC.CAGCUCUGGUUACa..acCCAGAAUGAAGUA NC_011029_G_9402_9470_p ACUUCUUUAGUAU...AAUUA.....GUACAACUGACUUCCAAUCAGU.CAGCUCUGGUUUUa..acCCAGAAUGAAGUA NC_005358_G_9398_9467_p ACUUCCUUAGUAU..aGUCCA.....GUACAACUGACUUCCAAUCAGU.CAGCUCUGGUCGCa..auCCAGAAUGAAGUA NC_000884_G_9395_9462_p AUUUUCUUAGUAU...AAAUA.....GUAUUGCUGACUUCCAAUCAGC.AGGUCCCGGAUCCa...gCUGGGAGAAAAUA NC_002658_G_9427_9495_p AUUUCUUUAGUAU...AACAA.....AUACCACUGACUUCCAAUCAGC.CAAUUCUAGUCCAa..acCUAGAAAGAAAUA NC_009056_G_9444_9512_p ACUUUCUUAGUAU..uAUUCA.....GUACAUUUGACUUCCAAUCAUA.UAGAUCUGGCUCCa...cCCAGAAGAAAGUA NC_005314_G_9414_9483_p ACUUUUCUAGUAU..uAAUCUu...aGUACAGUUGACUUCCAAUCAAC.UAGUUCCGGUAAA....aCCCGAGAAGAGUA NC_001892_G_9407_9475_p ACUCCCUUAGUAU...AAUCA.....GUACAACUGACUUCCAAUCAGU.UAGUUUCAGGUUUa..auCUGAAAGGGAGUA NC_013571_G_9367_9435_p ACUUUCUUAGUAU...AAUCA.....GUACAUCUGACUUCCAAUCAGU.UAGCUCUAGUAAAa..cuCUAGAAGAAAGUA NC_003041_G_9359_9426_p ACUUUCUUAGUAU...AAACA.....GUACGUCUGACUUCCAAUCAGU.UAGUUCUAGAACAa...cCUGGAAGAAAGUA NC_008064_G_9361_9429_p ACUUUCUUAGUAU...AAUCA.....GUACAUCUGACUUCCAAUCAGU.UAGCUCUAGUAAUa..auCUAGAAGAAAGUA NC_013563_G_9361_9428_p ACUUUCUUAGUAU...AAUCA.....GUACAUCUGACUUCCAAUCAGC.UAGCUCUAGCAAAa...cCUAGAAGAAAGUA NC_007936_G_9371_9438_p ACUUUCUUAGUAU...AUUAA.....GUACCACUGACUUCCAAUCAGU.UAGAUCCAAUUACa...uCUGGAAGAAAGUA NC_013276_G_9373_9441_p ACUUUCUUAGUAU...AUUUA.....GUACAGUUGACUUCCAAUCAAC.UAGGUCCAACUAUa..auUUGGAAGAAAGUA NC_013068_G_4061_4129_p ACUCUCUUAGUAU...AAUCA.....GUACAACCGACUUCCAAUCAGU.UAGCUCUAGACUAa..acCUAGAAGAGAGUA NC_005089_G_9391_9458_p ACUCCCUUAGUAU...AAUUA.....AUAUAACUGACUUCCAAUUAGU.AGAUUCUGAAUAAa...cCCAGAAGAGAGUA NC_012387_G_9392_9459_p ACUCCCUUAGUAU...AAUUA.....AUAUAACUGACUUCCAAUUAGU.AGAUUCUGAAUAAa...cCCAGAAGAGAGUA NC_006914_G_9391_9458_p ACUCCCUUAGUAU...AAUUA.....AUAUAACUGACUUCCAAUUAGU.AGAUUCUGAAUAAa...cCCAGAAGAGAGUA NC_006915_G_9393_9460_p ACUCCCUUAGUAU...AAUUA.....AUAUAACUGACUUCCAAUUAGU.AGAUUCUGAAGAAa...cCCAGAAGAGAGUA NC_010339_G_9393_9460_p ACUCCCUUAGUAU...AAUUA.....AUAUAACUGACUUCCAAUUAGU.AGAUUCUGAAGAAa...cCCAGAAGAGAGUA NC_010650_G_9387_9454_p ACUCUCUUAGUAU...AAUUA.....AUAUAACUGACUUCCAAUUAGU.AGAUUCUGGAAAUa...cCCAGAAGAGAGUA NC_012389_G_9378_9445_p AUUCCCUUAGUAU...AAGCA.....AUACAACUGACUUCCAAUUAGU.AAAUUCUGAAAAAa...uUCAGAAGGGAAUA NC_001665_G_9383_9450_p ACUCCCUUAGUAU...AAACA.....AUACAACUGACUUCCAAUCAGU.UAAUUCUGAAAAAa...cUCAGAAGAGAGUA NC_012461_G_9380_9447_p ACUCCCUUAGUAU...AAAAA.....AUACAACUGACUUCCAAUCAGU.AAAUUCUGAAAAAa...uUCAGAAGGGAGUA NC_012374_G_9376_9442_p ACUCCCUUAGUAU...AAUCA.....AUACAACUGACUUCCAAUCAGU.AAAUUCUGAAAAA....cCCAGAAGAGAGUA NC_011638_G_9373_9440_p ACUCUCUUAGUAU...AAUCA.....AUACAACUGACUUCCAAUCAGU.AAAUUCUGAAAAAa...cUCAGAAGAGAGUA NC_005315_G_9385_9453_p AUUCUUUUAGUAU...AACAA.....GUACUUUUGACUUCCAAUCAAA.CAGAUCAGAACAAa..cuUCUGAAAAGAAUA NC_002369_G_9419_9487_p ACUUCCCUAGUAU..cAAUUA.....GUACAGCUGACUUCCAAUCAUC.CAGUCCUAGUAUAa...uCUAGGGGGAAGUA NC_007009_G_9414_9481_p ACUCUUUUAGUAU...AACUA.....GUACAAUUGACUUCCAAUCAAU.CAGCUUUGACAGUa...uUCAAAAAGGAGUA NC_009747_G_9411_9478_p ACUCUUUUAGUAU...AACCA.....GUACAAUUGACUUCCAAUCAAU.CAGCUUUGACAGUa...uUCAAAAAGGAGUA NC_008066_G_9988_10055_p ACUCUUUUAGUAU...GACCA.....GUACAAUUGACUUCCAAUCAAU.UAGCUUUGACAAUg...uUCAAAAAGGAGUA NC_009748_G_9408_9475_p ACUCUUUUAGUAU...AACCA.....GUACAAUUGACUUCCAAUCAAU.CAGCUUUGACAAUa...uUCAAAAAGGAGUA NC_005943_G_9982_10049_p ACUCUUUUAGUAU...AACAA.....GUACAAUUGACUUCCAAUCAAU.CAGUUUUGACAACa...uUCAAAAAAGAGUA NC_002764_G_9457_9524_p ACUCUUUUAGUAU...AACCA.....GUACAAUUGACUUCCAAUCAAU.CAGUUUUGACAACa...uUCAAAAAAGAGUA NC_001992_G_9415_9482_p ACUCUUUUAGUAU...AAUUA.....GUACAAUUGACUUCCAAUCAAU.CAGCUUUGACAAUa...uUCAAAAAAGAGUA NC_006901_G_9446_9514_p AUUCUUUUAGUAU...AGCCA.....GUACAGCUGACUUCCAAUCAAC.UAGCUCCGAUCAAc..acUCGGAAAAGAAUA NC_008216_G_9438_9504_p AUUCUUUUAGUAU...AAUCA.....GUACAGCCGACUUCCAAUCAGC.UAGUUUCGAUAGU....aUCGAAAAAGAAUA NC_008219_G_9434_9501_p AUUCUUUUAGUAU...AACUA.....GUACAGCUGACUUCCAAUCAAC.UAGCUCCGAUAGUa...uUCGGAAAAGAAUA NC_008217_G_9432_9499_p AUUCUUUUAGUAU...AAGUA.....GUACAGCUGACUUCCAAUUAGC.UAGUUUUGAUGAUa...cUCAAAAAAGAAUA NC_008220_G_9416_9482_p AUCCUUUUAGUAU...AACUA.....GUACAGCCGACUUCCAAUCAGU.UAGUUUCGAUAAU....aUCGAAAAAGGAUA NC_008218_G_9434_9502_p AUUCUUUUAGUAU..aAACCA.....GUACGGCCGACUUCCAAUCAGC.UAGUUUCGACAACa...uUCGAAAAAGAAUA NC_008215_G_9429_9496_p AUCCUUUUAGUAU...AACUA.....GUACAGCUGACUUCCAAUCAGC.UAGCUUCGACAAUa...uUCGAAAAGGGAUA NC_006900_G_9438_9505_p AUUCUUUUAGUAU...AACUA.....GUACAGCUGACUUCCAAUUAGC.UAGUUUCGACAACa...uUCGAAAAAGAAUA NC_001645_G_9413_9480_p ACUCUUUUAGUAU...AAUUA.....GUACCGUUAACUUCCAAUUAAC.CAGUUUUGGUAGUa...cCCAAAAAAGAGUA NC_011120_G_9415_9482_p ACUCUUUUAGUAU...AAUUA.....GUACCGUUAACUUCCAAUUAAC.CAGUUUUGGUAGUa...cCCAAAAAAGAGUA NC_012920_G_9991_10058_p ACUCUUUUAGUAU...AAAUA.....GUACCGUUAACUUCCAAUUAAC.UAGUUUUGACAACa...uUCAAAAAAGAGUA NC_011137_G_9986_10053_p ACUCUUUUAGUAU...AAAUA.....GUACCGUUAACUUCCAAUUAAC.UAGUUUUGACAACa...uUCAAAAAAGAGUA NC_001644_G_9410_9477_p ACUCUUUUAGUAU...AAGCA.....GUACCGUUAACUUCCAAUUAAC.UAGUUUUGACAACa...uUCAAAAAAGAGUA NC_001643_G_9409_9476_p ACUCUUUUAGUAU...AAGUA.....GUACCGUUAACUUCCAAUUAAC.UAGUUUUGACAACa...uUCAAAAAAGAGUA NC_002083_G_9447_9514_p ACUCUUUUAGUAU...AAACA.....GUACCGUUAACUUCCAAUUAAC.UAGUUUUGACAACg...cCCAAAAAAGAGUA NC_001646_G_9436_9503_p ACUCUUUUAGUAU...AAGCA.....GUACCGUUAACUUCCAAUUAAC.CAGUUUUGACAACa...cUCAAAAAAGAGUA NC_002082_G_9410_9477_p ACUCUUUUAGUAU...AAACA.....GUACUGUUAACUUCCAAUUAAC.CAGCUUCGAUAACg...cUCGAAAAAGAGUA NC_002763_G_9417_9483_p AUUCUCUUAGUAU...AAACA.....GUACAAUUGACUUCCAAUUAAU.AGGCCUUGAUAAA....cCCAAGAGAGAAUA NC_012775_G_9377_9443_p ACUCUCUUAGUAU...AAACA.....GUACCACUGACUUCCAAUCAGU.GAGCCUCGACAGA....cCCGAGAGAGAGUA NC_002811_G_9423_9492_p GUUCCUUUAGUAU..cAAUUA.....GUACAAUUGACUUCCAAUCAAU.UAGCCCUAGUACAa..uuCUAGGAAGGAACA NC_012774_G_9444_9512_p AUUCCUUUAGUAU..uAAUUA.....GUACAGUUGACUUCCAAUCAAU.UAGUCCUGGUACAa...cCCAGGAAAGAAUA NC_010299_G_9422_9491_p AUUCUUUUAGUAUu.aACACA.....GUACAGUUGACUUCCAAUCAAC.UAGCUUCGGACAGa...cCCGAAAAAGAAUA NC_012763_G_9443_9511_p AUUCUUUUAGUAU...AAUAA.....GUACAAUUGACUUCCAAUCAAU.AAGAUUUGGUAAAu..aaCCGAAAAAGAAUA NC_002765_G_9444_9512_p GCUCUUUUAGUAC...AACUA.....GUACAAUUGACUUCCAAUCAAU.AGGAUUUGGUAAAu..aaCCAAAAGAGAGCA NC_012764_G_9443_9511_p AUUCUUUUAGUAU...AAUCA.....GUACAAUUGACUUCCAAUCAAU.AAGAUUCGGACAGc..aaCCGAAAAAGAAUA NC_011053_G_9415_9484_p AUUCUUUUAGUAUu.aACCCA.....GUACAAUUGACUUCCAAUCAAU.UAGUUUCGGCGAAa...cCCGAAAAAGAAUA NC_012766_G_9414_9483_p AUUCUUUUAGUAUu.gACCUA.....AUACAAUUGACUUCCAAUCAAU.UAACUUCGGUGAAa...aCCGAAAAAGAAUA NC_012769_G_9414_9483_p AUUCUUUUAGUAUu.gACCUA.....AUACAAUUGACUUCCAAUCAAU.UAACUUCGGUGAAa...aCCGAAAAAGAAUA NC_012771_G_9412_9481_p AUUCUUUUAGUAUu.gACCUA.....AUACAAUUGACUUCCAAUCAAU.CAACUUCGGUAAAa...gCCGAAAAAGAAUA NC_010300_G_9415_9485_p AUUCUUUUAGUAUu.gACCUA.....AUACAAUUGACUUCCAAUCAAU.CAACUUCGGUAAAa..aaCCGAAAAAGAAUA NC_004025_G_9407_9476_p AUUCUUUUAGUAUc.gACCCA.....AUACAAUUGACUUCCAAUUAAU.UAACUUCGGUGAAa...aCCGGAAAAGAAUA NC_012773_G_9425_9494_p AUUCUUUUAGUAUc.gACCCA.....AUACAGUUGACUUCCAAUUAAC.CAACUUCGGUAAAa...aCCGAAAAAGAAUA NC_012761_G_9445_9512_p ACUCCUUUAGUAU...AAUCA.....GUACAAUUGACUUCCAAUCAAU.AAGAUUCGGACGGa...aCCGAAAAAGAGUA NC_012762_G_9442_9509_p ACUCUUUUAGUAU...AAUUA.....GUACAAUUGACUUCCAAUCAAU.AAGGUUCGGACAAa...aCCGAGAAAGAGUA NC_002521_G_9381_9446_p ACUCCCUUAGUAU...-AGUA.....GUAUAGCUGACUUCCAAUCAGC.AGGCCCCACCAGU....uGUGGGAAGGAGUA NC_011124_G_9416_9484_p AUUUCUCUAGUAU..cAAUUA.....GUACAGUUGACCUCCAAUUAAC.UAGUUCUGGUCAAa...uCCAGAGAGAAAUA NC_009691_G_9418_9486_p AUUUCUCUAGUAU..cAAUUA.....GUACAGUUGACUUCCAAUUAAC.UAGUUCUGGUCAAa...uCCAGAGAGAAAUA NC_008093_G_9429_9496_p ACUUCUUUAGUAU...AACUA.....GUACAAUUGACUUCCAAUCAGU.UAGCUCCAGAUUAa...cCUGGAAAGAAGUA NC_008092_G_9429_9496_p AUUUCUUUAGUAU...AACUA.....GUACAAUUGACUUCCAAUCAGU.UAGCUCCAGAUCAa...cCUGGAAAGAAGUA NC_010340_G_9428_9495_p ACUUCUUUAGUAU...AACUA.....GUACAAUUGACUUCCAAUCAGU.UAGCUCCAGAUCAa...cCUGGAAAGAAGUA NC_002008_G_9428_9495_p AUUUCUUUAGUAU...AACUA.....GUACAAUUGACUUCCAAUCAGU.UAGCUCCAGAUCAa...cCUGGAAAGAAGUA NC_011218_G_9430_9497_p ACUUCUUUAGUAU...AACUA.....GUACAAUUGACUUCCAAUCAGU.UAGCUCCAGAUCAa...cCUGGAAAGAAGUA NC_009686_G_9429_9496_p AUUUCUUUAGUAU...AACUA.....GUACAAUUGACUUCCAAUCAGU.UAGCUCCAGAUCAa...cCUGGAAAGAAGUA NC_013445_G_9427_9494_p ACUUCUUUAGUAU...AAUUA.....GUACAAUUGACUUCCAAUCAAU.UAGUUCCAGACCAa...cCCGGAAAGAAGUA NC_013700_G_9436_9503_p ACUUCUUUAGUAU...AUCAA.....GUACAACUGACUUCCAAUCAGU.UAGCUUCAGUUCAa...cCUGAAAAGAAGUA NC_008434_G_9429_9496_p ACUUCUUUAGUAU...AAUUA.....GUACAAUUGACUUCCAAUCAGU.UAGCUUCAGACAGa...uCUGAAAAGAAGUA NC_010497_G_9413_9481_p AUUUCUCUAGUAU..uAAUCA.....GUACAAUUGACUUCCAAUUAAU.UAGUUCUGGUCCAa...cCCAGAGAGAAAUA NC_009692_G_9409_9478_p AUUUCCCUAGUAU..uAACAA.....GUACAGUUGACUUCCAAUCAAC.UAGUUCUGGUGAUa..guCCAGAGAGAAAUA NC_011358_G_9407_9476_p AUUUCUCUAGUAU..uAACAA.....GUACAGUUGACUUCCAAUCAAC.CAGUUCUGGUAUAa..auCCAGAGAGAAAUA NC_012141_G_9408_9476_p AUUUCUCUAGUAU..uAACAA.....GUACAGUUGACUUCCAAUCAAU.UAGUUCUGGUGUAa...cCCAGAGAGAAAUA NC_009678_G_9405_9474_p AUUUCUCUAGUAU..cAACAA.....GUACAGUUGACUUCCAAUUAAC.CAGUUCUGGUAACa..acCCAGAGAGAAAUA NC_011579_G_9404_9473_p AUUUCUCUAGUAU..cAACAA.....GUACAGUUGACUUCCAAUUAAC.CAGUUCUGGUAACa..acCCAGAGAGAAAUA NC_009677_G_9401_9470_p ACUUCUCUAGUAU..uAGCAA.....GUACAGUCGACUUCCAAUCAAC.UAGUUCUGGUAACa..acCCAGAGAGAAGUA NC_011125_G_9404_9473_p AUUUCUCUAGUAU..uAACAA.....GUACAGUUGACUUCCAAUCAAC.AAGUUCUGGUAAUa..aaCCAGAGAGAAGUA NC_004029_G_9414_9484_p GCUUCCUUAGUAU..cAACAA.....GUACGGUCGACUUCCAAUCAACcAGGUUCUGGUUAUa..acCCAGAAGAAAGCA NC_008417_G_9420_9489_p GUCUCCUUAGUAU..aAACUA.....GUACAGUUGACUUCCAAUCAGC.CAGUUCUGGACACc..acCCAGAAGGAAACA NC_008420_G_9425_9494_p GUUUCCUUAGUAU..uAAUUA.....GUACAGUUGACUUCCAAUCAAC.CAGUUCUGGCCACc..auCCAGAAGGAAACA NC_008415_G_9417_9486_p GCUUCCUUAGUAU..uAAUUA.....GUAUAGUUGACUUCCAAUCAAC.CGGCUCUGGCUACa..acCCAGAAGGAAACA NC_004030_G_9419_9490_p GUUCCCUUAGUAU..uAACUA.....GUACAGUUGACUUCCAAUCAAC.CAGUUCUGGCCAAuaaacCCAGAAGGAAACA NC_008419_G_9425_9494_p GUCUCCUUAGUAU..uAACUA.....GUACAGUUGACUUCCAAUCAAC.CAGUUCUGGCCAUa..auCCAGAAGGAAACA NC_008418_G_9420_9489_p GUCUCCUUAGUAU..uAACUA.....GUACAGUUGACUUCCAAUCAAC.CAGUUCUGGCCACa..acCCAGAAGGAAACA NC_008416_G_9422_9491_p GUUUCCUUAGUAU..uAACUA.....GUACAGUUGACUUCCAAUCAAC.CAGUUCUGGCCACa..auCCAGAAGGAAAUA NC_008427_G_9407_9474_p GCUUCCUUAGUAU...AAUUA.....GUAUAGUUGACUUCCAAUCAAC.CAGCUCUGGUUGAa...cCCAGAAAGAAGCA NC_008426_G_9411_9478_p GCUUCUUUAGUAU...AGUCA.....GUACAGUUGACUUCCAAUCAAC.CAGCUCUGGUUCAg...cCCAGAAAGAAGCA NC_001602_G_10312_10379_p GCUUCCUUAGUAU...AAUUA.....GUAUAGUUGACUUCCAAUCAAC.CAGCUCUGGUUAAa...uCCAGAAAGAAGCA NC_008425_G_9415_9482_p 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GUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGGCAGu...aCCAGAGAAAAACA NC_001610_G_9455_9522_p AUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGGUCAa...aCCAGAGAAAAAUA NC_006299_G_9464_9531_p AUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGGUAAu...uCCAGAGAAAAAUA NC_008145_G_9427_9494_p AUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGGUAAa...aCCAGAGAAAAAUA NC_008136_G_9441_9508_p AUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGGUAAc...gCCAGAGAAAAAUA NC_008447_G_9422_9489_p AUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCCGGUUAAc...aCCGGAGAAAAAUA NC_001794_G_9454_9521_p AUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGAUAAc...aCCAGAGAAAAAUA NC_008134_G_9445_9513_p AUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGACAUa..aaCCAGAGAAAAAUA NC_008135_G_9447_9514_p AUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGGUAAa...aCCAGGGAAAAAUA NC_003039_G_9424_9491_p AUUUUUCUAGUAU...AAUAA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGGUAAa...aCCAGAGAAAAAUA NC_008133_G_9439_9506_p AUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCACU.AAGUUCUGGUUAAa...aCCAGAGAAAAAUA NC_006524_G_9439_9507_p AUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGUUCAu..caCCAGAGAAAAAUA NC_006518_G_9433_9500_p AUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGGUAAa...aCCAGAGAAAAAUA NC_003322_G_9444_9511_p AUUCUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGGUAAa...aCCAGAGAAAAAUA NC_005828_G_9424_9491_p AUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGGUAAa...aCCAGAGAAAAAUA NC_005829_G_9430_9497_p AUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGGUAAa...aCCAGAGAAAAAUA NC_002746_G_9434_9501_p AUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGGUAAa...aCCAGAGAAAAAUA NC_007632_G_9462_9529_p AUUUUUCUAGUAU...AAUUA.....GUACUACUGAUUUCCAAUCAUU.AAGUUCUGGGUAAa...aCCAGAGAAAAAUA NC_000891_G_9457_9526_p AUUUCUCUAGUAU..cAAUUA.....GUACAAGUGACUUCCAAUCAUU.AAGUUUUGGUCUCa..acCCAAAGAGAAAUA NC_003321_G_9452_9520_p AUUUUUCUAGUAU..uAAUUA.....GUACAAGUGACUUCCAAUCACU.AAGUUUUGGUCUAa...uCCAAAGAAAAGUA NC_006364_G_9456_9524_p AUUUUUCUAGUAU..uAAUUA.....GUACAAGUGACUUCCAAUCACU.AAGUUUUGGUCUAa...uCCAAAGAAGAAUA #=GC SS_cons (((((((,,<<<<..._____.....>>>>,<<<<<_______>>>>>.,,,,<<<<<____.....>>>>>))))))): #=GC RF auuuuuuUAgUAu...AAuuA.....gUAcauuUgauUUCCAAucAaa.AgGUcuuggUuuA.....ccaagaaaaaauA #=GC SN 0000000..1111.............1111.22222.......22222.....33333.........333330000000. #=GF CS 80 columns, 21 paired, 19 covariant; 4 stems //