Extended Cluster Summary
Extendend tables summarizing the deuterostomian let-7 associated cluster can be downloaded here.
Therein, miRBase names were noted when this microRNA is already annotated.
- Extended summary of clusters A-D
[pdf]
- Extended summary of clusters E-L
[pdf]
Genomic Location
- GFF file containing all collected let-7 associated microRNAs among Deuterostomia [gff]
- Genome versions we used during our analysis [list]
Please note that the sequences ssc-C-mir-125 and ggo-D-mir-100 are solely experimentally derived and hence won't appear in the gff file.
- GFF file containing all mirbase-derived let-7 associated microRNAs among Protostomia and Cnidaria [gff]
- Genome versions of protostomes we used during out analysis [list]
MicroRNA family Alignments
Alignments of let-7, mir-100, and mir-125 families in Stockholm format can be downloaded here.
Covariance Models
(Sub)family-wide covariance models were used for structure
and sequence-based homology searches for the deuterosome microRNAs
of the let-7, mir-100, and mir-125 families.