| Sequence ID | dm3.chr3RHet |
|---|---|
| Location | 846,597 – 846,648 |
| Length | 51 |
| Max. P | 0.997020 |
| Location | 846,597 – 846,648 |
|---|---|
| Length | 51 |
| Sequences | 3 |
| Columns | 51 |
| Reading direction | reverse |
| Mean pairwise identity | 58.82 |
| Shannon entropy | 0.57125 |
| G+C content | 0.53922 |
| Mean single sequence MFE | -18.17 |
| Consensus MFE | -10.92 |
| Energy contribution | -11.60 |
| Covariance contribution | 0.68 |
| Combinations/Pair | 1.43 |
| Mean z-score | -2.16 |
| Structure conservation index | 0.60 |
| Background model | dinucleotide |
| Decision model | sequence based alignment quality |
| SVM decision value | 3.02 |
| SVM RNA-class probability | 0.997020 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>dm3.chr3RHet 846597 51 - 2517507 ACGUCUGCUUGGUAGACAUUCGCUGUUGUCAUGUGCGGCGCGCCGGUGGAA ..((((((...)))))).(((((((.((((......))))...))))))). ( -15.40, z-score = 0.32, R) >dp4.Unknown_group_65 3023 51 - 26850 AUAUCUCGCUGGCCGUCUCCCAACGUGGUGGUUCGUUGGUGGCUAGUAAUU .......((((((((....((((((........)))))))))))))).... ( -19.00, z-score = -3.25, R) >droPer1.super_426 9576 50 - 15460 AUAUAU-GCUGGCCGUCUCCCAACGUGGUGGUUCGUUGGUGGCUAGUAAUU .....(-((((((((....((((((........)))))))))))))))... ( -20.10, z-score = -3.54, R) >consensus AUAUCU_GCUGGCCGUCUCCCAACGUGGUGGUUCGUUGGUGGCUAGUAAUU .......((((((((....((((((........)))))))))))))).... (-10.92 = -11.60 + 0.68)
Generated by rnazCluster.pl (part of RNAz 1.0) on Tue Apr 19 23:48:04 2011