| Sequence ID | dm3.chr2L |
|---|---|
| Location | 22,552,063 – 22,552,113 |
| Length | 50 |
| Max. P | 0.866304 |
| Location | 22,552,063 – 22,552,113 |
|---|---|
| Length | 50 |
| Sequences | 3 |
| Columns | 50 |
| Reading direction | reverse |
| Mean pairwise identity | 76.00 |
| Shannon entropy | 0.33059 |
| G+C content | 0.46667 |
| Mean single sequence MFE | -16.17 |
| Consensus MFE | -9.95 |
| Energy contribution | -11.07 |
| Covariance contribution | 1.11 |
| Combinations/Pair | 1.09 |
| Mean z-score | -2.14 |
| Structure conservation index | 0.62 |
| Background model | dinucleotide |
| Decision model | sequence based alignment quality |
| SVM decision value | 0.98 |
| SVM RNA-class probability | 0.866304 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>dm3.chr2L 22552063 50 - 23011544 CCUUCAAGUUACGUUCACUUAGCUGGUGAAGGUAAGGGAGGCUCAGAAUA (((((...((((.((((((.....)))))).)))).)))))......... ( -16.60, z-score = -2.64, R) >dp4.Unknown_singleton_2612 6274 50 - 8391 GUUCUAAAUUUUCCUCGCUGAGUUUGUGGAGGUAUGGCAGGCUCAGUAGA .............((.(((((((((((.(.....).))))))))))))). ( -14.70, z-score = -1.70, R) >droPer1.super_15 14663 50 - 2181545 GUUCUAAAUUUUCCUCGCUGAGCUUGUGGAGGUAUGGCAGGCUCAGUAGA .............((.(((((((((((.(.....).))))))))))))). ( -17.20, z-score = -2.08, R) >consensus GUUCUAAAUUUUCCUCGCUGAGCUUGUGGAGGUAUGGCAGGCUCAGUAGA ................(((((((((((.........)))))))))))... ( -9.95 = -11.07 + 1.11)
Generated by rnazCluster.pl (part of RNAz 1.0) on Tue Apr 19 21:58:33 2011