| Sequence ID | dm3.chrX |
|---|---|
| Location | 17,455,123 – 17,455,174 |
| Length | 51 |
| Max. P | 0.791919 |
| Location | 17,455,123 – 17,455,174 |
|---|---|
| Length | 51 |
| Sequences | 3 |
| Columns | 51 |
| Reading direction | reverse |
| Mean pairwise identity | 92.16 |
| Shannon entropy | 0.10803 |
| G+C content | 0.50980 |
| Mean single sequence MFE | -13.73 |
| Consensus MFE | -13.95 |
| Energy contribution | -13.73 |
| Covariance contribution | -0.22 |
| Combinations/Pair | 1.08 |
| Mean z-score | -0.87 |
| Structure conservation index | 1.02 |
| Background model | dinucleotide |
| Decision model | sequence based alignment quality |
| SVM decision value | 0.70 |
| SVM RNA-class probability | 0.791919 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>dm3.chrX 17455123 51 - 22422827 UCUCCUUAAACUUCUGCUGGGGCUCUCUUCGAAGAGAGCGCUAAUCCUGCG ...............(((((.(((((((....))))))).))).....)). ( -14.60, z-score = -1.34, R) >droSim1.chrX 3563177 51 + 17042790 UGUCCUUCAAUUUCUGCUGGGGCUUUCUUCGAAGAGAGCGCUAAUCGUGCA .(((((.((.....))..)))))(((((....)))))((((.....)))). ( -12.00, z-score = 0.02, R) >droSec1.super_17 1298792 51 - 1527944 UCUCCUUAAACUUCUGCUGGGGCUCUCUUCGAAGAGAGCGCUAAUCCUGCA ...............(((((.(((((((....))))))).))).....)). ( -14.60, z-score = -1.28, R) >consensus UCUCCUUAAACUUCUGCUGGGGCUCUCUUCGAAGAGAGCGCUAAUCCUGCA ...............(((((.(((((((....))))))).))).....)). (-13.95 = -13.73 + -0.22)
Generated by rnazCluster.pl (part of RNAz 1.0) on Wed Apr 20 01:53:15 2011