| Sequence ID | dm3.chrX |
|---|---|
| Location | 12,356,396 – 12,356,448 |
| Length | 52 |
| Max. P | 0.784438 |
| Location | 12,356,396 – 12,356,448 |
|---|---|
| Length | 52 |
| Sequences | 4 |
| Columns | 52 |
| Reading direction | reverse |
| Mean pairwise identity | 97.44 |
| Shannon entropy | 0.04445 |
| G+C content | 0.40865 |
| Mean single sequence MFE | -9.50 |
| Consensus MFE | -9.40 |
| Energy contribution | -9.40 |
| Covariance contribution | 0.00 |
| Combinations/Pair | 1.00 |
| Mean z-score | -1.21 |
| Structure conservation index | 0.99 |
| Background model | dinucleotide |
| Decision model | sequence based alignment quality |
| SVM decision value | 0.68 |
| SVM RNA-class probability | 0.784438 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>dm3.chrX 12356396 52 - 22422827 GUCUGCAAAAAUAGAACGCACAAAUAUUGCCGGUUCAAAAAUACCGGUUAGC .((((......)))).............((((((........)))))).... ( -9.40, z-score = -1.22, R) >droEre2.scaffold_4690 4247929 52 + 18748788 UUCUGCAGAAAUAGAACGCACAAAUAUUGCCGGUUCAAAAAUACCGGUUAGC (((((......)))))............((((((........)))))).... ( -9.80, z-score = -1.34, R) >droYak2.chrX 6631683 52 - 21770863 GUCUGCACAAAUAGAACGCACAAAUAUUGCCGGUUCAAAAAUACCGGUUAGC .((((......)))).............((((((........)))))).... ( -9.40, z-score = -1.06, R) >droSec1.super_21 114436 52 - 1102487 GUCUGCAAAAAUAGAACGCACAAAUAUUGCCGGUUCAAAAAUACCGGUUAGC .((((......)))).............((((((........)))))).... ( -9.40, z-score = -1.22, R) >consensus GUCUGCAAAAAUAGAACGCACAAAUAUUGCCGGUUCAAAAAUACCGGUUAGC .((((......)))).............((((((........)))))).... ( -9.40 = -9.40 + 0.00)
Generated by rnazCluster.pl (part of RNAz 1.0) on Wed Apr 20 01:37:21 2011