| Sequence ID | dm3.chrX |
|---|---|
| Location | 10,930,166 – 10,930,217 |
| Length | 51 |
| Max. P | 0.977640 |
| Location | 10,930,166 – 10,930,217 |
|---|---|
| Length | 51 |
| Sequences | 5 |
| Columns | 51 |
| Reading direction | forward |
| Mean pairwise identity | 95.69 |
| Shannon entropy | 0.07566 |
| G+C content | 0.52941 |
| Mean single sequence MFE | -18.20 |
| Consensus MFE | -18.32 |
| Energy contribution | -18.12 |
| Covariance contribution | -0.20 |
| Combinations/Pair | 1.15 |
| Mean z-score | -1.88 |
| Structure conservation index | 1.01 |
| Background model | dinucleotide |
| Decision model | sequence based alignment quality |
| SVM decision value | 1.98 |
| SVM RNA-class probability | 0.977640 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>dm3.chrX 10930166 51 + 22422827 UCUUAACGGAUCCGUGCUUAUGGCAGUUUCCGGCUGCCAGAUGGAUGGACU ..........(((((.(...(((((((.....)))))))...).))))).. ( -19.40, z-score = -2.53, R) >droEre2.scaffold_4690 14554493 51 - 18748788 UCUCAGCGGAUCCGUGCUUAUGGCAGCUUCCGGCUGCCAGAUGGAUGGACU ..........(((((.(...(((((((.....)))))))...).))))).. ( -21.50, z-score = -1.99, R) >droYak2.chrX 10583364 51 - 21770863 UCUUAACGGAUCCGUGUUUAUGGCAGUUUCCGGGUGCCAGAUGGAUGGACU ..........(((((.(...(((((.(.....).)))))...).))))).. ( -13.90, z-score = -0.44, R) >droSec1.super_15 1642485 51 + 1954846 UCUUAACGGAUCCGUGUUUAUGGCAGUUUCCGGCUGCCAGAUGGAUGGACU ..........(((((.(...(((((((.....)))))))...).))))).. ( -18.10, z-score = -2.23, R) >droSim1.chrX 8483212 51 + 17042790 UCUUAACGGAUCCGUGUUUAUGGCAGUUUCCGGCUGCCAGAUGGAUGGACU ..........(((((.(...(((((((.....)))))))...).))))).. ( -18.10, z-score = -2.23, R) >consensus UCUUAACGGAUCCGUGUUUAUGGCAGUUUCCGGCUGCCAGAUGGAUGGACU ..........(((((.(...(((((((.....)))))))...).))))).. (-18.32 = -18.12 + -0.20)
Generated by rnazCluster.pl (part of RNAz 1.0) on Wed Apr 20 01:33:00 2011