| Sequence ID | dm3.chr2L |
|---|---|
| Location | 24,690 – 24,741 |
| Length | 51 |
| Max. P | 0.911107 |
| Location | 24,690 – 24,741 |
|---|---|
| Length | 51 |
| Sequences | 3 |
| Columns | 51 |
| Reading direction | reverse |
| Mean pairwise identity | 97.39 |
| Shannon entropy | 0.03601 |
| G+C content | 0.32680 |
| Mean single sequence MFE | -7.40 |
| Consensus MFE | -7.56 |
| Energy contribution | -7.90 |
| Covariance contribution | 0.33 |
| Combinations/Pair | 1.00 |
| Mean z-score | -1.34 |
| Structure conservation index | 1.02 |
| Background model | dinucleotide |
| Decision model | sequence based alignment quality |
| SVM decision value | 1.22 |
| SVM RNA-class probability | 0.911107 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>dm3.chr2L 24690 51 - 23011544 CUCGAAAGAAGCCUUUAGUGCACUAAUACAUAAGAACAUUGCAUUUAAAAU .((....)).......((((((.................))))))...... ( -4.93, z-score = -0.39, R) >droSim1.chr2L 28253 51 - 22036055 CUCGCAAGAAGCCUUUAGUGCACUAAUACAUAAGAACAUUGCAUUAAAAAU .((....))....(((((((((.................)))))))))... ( -8.63, z-score = -1.82, R) >droSec1.super_14 29750 51 - 2068291 CUCGCAAGAAGCCUUUAGUGCACUAAUACAUAAGAACAUUGCAUUAAAAAU .((....))....(((((((((.................)))))))))... ( -8.63, z-score = -1.82, R) >consensus CUCGCAAGAAGCCUUUAGUGCACUAAUACAUAAGAACAUUGCAUUAAAAAU .((....))....(((((((((.................)))))))))... ( -7.56 = -7.90 + 0.33)
Generated by rnazCluster.pl (part of RNAz 1.0) on Tue Apr 19 21:04:55 2011