| Sequence ID | dm3.chr3R |
|---|---|
| Location | 10,855,937 – 10,855,988 |
| Length | 51 |
| Max. P | 0.596133 |
| Location | 10,855,937 – 10,855,988 |
|---|---|
| Length | 51 |
| Sequences | 3 |
| Columns | 51 |
| Reading direction | reverse |
| Mean pairwise identity | 100.00 |
| Shannon entropy | -0.00000 |
| G+C content | 0.29412 |
| Mean single sequence MFE | -2.90 |
| Consensus MFE | -2.90 |
| Energy contribution | -2.90 |
| Covariance contribution | -0.00 |
| Combinations/Pair | 1.00 |
| Mean z-score | -0.95 |
| Structure conservation index | 1.00 |
| Background model | dinucleotide |
| Decision model | sequence based alignment quality |
| SVM decision value | 0.21 |
| SVM RNA-class probability | 0.596133 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>dm3.chr3R 10855937 51 - 27905053 GCUGUUAUUCCGUCAUAAGUAAUGCAUUGUCUUAUCUUUUUCUCUAUUUUA ((.((((((........)))))))).......................... ( -2.90, z-score = -0.95, R) >droSec1.super_0 10039508 51 + 21120651 GCUGUUAUUCCGUCAUAAGUAAUGCAUUGUCUUAUCUUUUUCUCUAUUUUA ((.((((((........)))))))).......................... ( -2.90, z-score = -0.95, R) >droSim1.chr3R 16916866 51 + 27517382 GCUGUUAUUCCGUCAUAAGUAAUGCAUUGUCUUAUCUUUUUCUCUAUUUUA ((.((((((........)))))))).......................... ( -2.90, z-score = -0.95, R) >consensus GCUGUUAUUCCGUCAUAAGUAAUGCAUUGUCUUAUCUUUUUCUCUAUUUUA ((.((((((........)))))))).......................... ( -2.90 = -2.90 + -0.00)
Generated by rnazCluster.pl (part of RNAz 1.0) on Wed Apr 20 00:16:27 2011