CLUSTAL W (1.83) multiple sequence alignment upstream.sko.U6.135.235.M22853 ---ATGGGAGATTCTACGTATCGTGTACGTACATT--TGCTCACCGTGGC upstream.sko.U6.249.349.M22665 ----GAACACATTGAACGTATCGTATACGTATATTG-CGTTCACCATGTG upstream.sko.U6atac.549.649.M2 ----TACATAGCTGA-TGAGCCACTGTAC-TATTTT-AGCTCACCGTATC upstream.sko.U6atac.648.748.M2 ----CAGATAACTTA-TAAGCCACTTCAT-TATTTC-TGCTCACCGTGTC upstream.sko.U6atac.572.672.M2 ----AGAGTCTATAA-CAAGGGAAATAAA-CATTTA-CTCTCACCGTGTC sko.u3.100up CGGATATGTATTTAAATATGCCACATGATGCAGTGG-TCAAAACCGTGTT sko.mrp.100up --CAATCTAATTCAAGTAGTTCATCATGT-GGGTCT-CGCTCACCACAAC upstream.sko.U6.472.572.M24514 ------GTTGAACAAACGGTGTACATACGTACCTAGCCTCTCACCACAGC sko.7sk.100up ------AGAAAATGTTCATTGAGAATTTCACTGACTCCCCTCACCGAGTC sko.p.100up ---GGTAATAGTCATTATCGTATTAATAATTTGCATACTCTCACC-TGAG *** upstream.sko.U6.135.235.M22853 TGTAATGTTTATGCACGTTGT-AGACTTATATAGTAGATGTTGACTACAC upstream.sko.U6.249.349.M22665 TAGAATGTTTTGAATTTCTCT-ACGCTTATATAGCAAATGAAAACCCCTA upstream.sko.U6atac.549.649.M2 TAGTTATTTGCAGCACAATATGATGCATATATAGCAAGAAATTAGCATTC upstream.sko.U6atac.648.748.M2 CAATTATTTGCAGCACAATATGATACATATATAGCAAGACATGAGTATTA upstream.sko.U6atac.572.672.M2 CTGTTATTTGCAGCACAATATGATACATATATAGCAAGACATGAGCATTA sko.u3.100up CAGATTGTTGTAA-ATACTTGGATATA-ATATTCCTTAAGATGTGTATCT sko.mrp.100up CAGTTTTTCACAAAGAAACAACACATATATATAGAGTTCAATAACGCTCC upstream.sko.U6.472.572.M24514 AAGAATGTTAATATTAAATGGTGCTTTTAAATTG-GCATTGCGCCCCAGA sko.7sk.100up TTGAATTTGTGCCATGTTTGATGCGGTTATAT-GCGAGCTAGTACTAACA sko.p.100up TATGTTTTGTGACTGTCTTACTCTCCATAAGTATCAGTTAAGATATATTA * * * upstream.sko.U6.135.235.M22853 A-GTGTTG upstream.sko.U6.249.349.M22665 T-AAGTTG upstream.sko.U6atac.549.649.M2 ACACATTG upstream.sko.U6atac.648.748.M2 ACATGATG upstream.sko.U6atac.572.672.M2 ACATGATG sko.u3.100up A-GTA--- sko.mrp.100up AA------ upstream.sko.U6.472.572.M24514 TGAGATTG sko.7sk.100up CGGAAGTG sko.p.100up TTAAT---