Sequence ID | Eco_1 |
---|---|
Location | 3,988,954 – 3,989,044 |
Length | 90 |
Max. P | 0.638158 |
Location | 3,988,954 – 3,989,044 |
---|---|
Length | 90 |
Sequences | 3 |
Columns | 90 |
Reading direction | forward |
Mean pairwise identity | 99.26 |
Mean single sequence MFE | -21.80 |
Consensus MFE | -21.80 |
Energy contribution | -21.80 |
Covariance contribution | 0.00 |
Combinations/Pair | 1.00 |
Mean z-score | -1.47 |
Structure conservation index | 1.00 |
SVM decision value | 0.22 |
SVM RNA-class probability | 0.638158 |
Prediction | RNA |
Download alignment: ClustalW | MAF
>Eco_1 3988954 90 + 1 AACGGUGCUACACUUGUAUGUAGCGCAUCUUUCUUUACGGUCAAUCAGCAAGGUGUUAAAUUGAUCACGUUUUAGACCAUUUUUUCGUCG ((((((((((((......))))))))............(((((((.(((.....)))..))))))).))))...(((.........))). ( -21.60) >Sfl_1 1 90 + 1 AACGGUGCUACACUUGUAUGUAGCGCAUCUUUCUUUACGGUCAAUCAGCAAGGUGUUAAAUUGAUCACGUUUUAGACCAUUUUUUCGUCG ((((((((((((......))))))))............(((((((.(((.....)))..))))))).))))...(((.........))). ( -21.60) >Sty_1 1 90 + 1 AACGGUGCUACACUUGUAUGUAGCGCAUCUUUCUUUACGGUCAAUGAGCAAGGUGUUAAAUUGAUCACGUUUUAGACCAUUUUUUCGUCG ((((((((((((......))))))))............(((((((.(((.....)))..))))))).))))...(((.........))). ( -22.20) >consensus AACGGUGCUACACUUGUAUGUAGCGCAUCUUUCUUUACGGUCAAUCAGCAAGGUGUUAAAUUGAUCACGUUUUAGACCAUUUUUUCGUCG ((((((((((((......))))))))............(((((((.(((.....)))..))))))).))))...(((.........))). (-21.80 = -21.80 + 0.00)
Generated by rnazCluster.pl (part of RNAz 1.0) on Fri Dec 1 11:06:07 2006