Sequence ID | Eco_1 |
---|---|
Location | 4,494,393 – 4,494,513 |
Length | 120 |
Max. P | 0.694070 |
Location | 4,494,393 – 4,494,513 |
---|---|
Length | 120 |
Sequences | 3 |
Columns | 120 |
Reading direction | forward |
Mean pairwise identity | 100.00 |
Mean single sequence MFE | -36.60 |
Consensus MFE | -34.60 |
Energy contribution | -36.60 |
Covariance contribution | 2.00 |
Combinations/Pair | 1.00 |
Mean z-score | -1.78 |
Structure conservation index | 0.95 |
SVM decision value | 0.34 |
SVM RNA-class probability | 0.694070 |
Prediction | RNA |
Download alignment: ClustalW | MAF
>Eco_1 4494393 120 + 1 UAUAAUCCACAACGUUUUCCGCAUACCUCUUCAGUGCCGAAGUGGCGAAAUCGGUAGACGCAGUUGAUUCAAAAUCAACCGUAGAAAUACGUGCCGGUUCGAGUCCGGCCUUCGGCACCA .................................((((((((((((((((.((((((......((((((.....))))))((((....))))))))))))))...)))..))))))))).. ( -36.60) >Sfl_1 25 120 + 1 UAUAAUCCACAACGUUUUCCGCAUACCUCUUCAGUGCCGAAGUGGCGAAAUCGGUAGACGCAGUUGAUUCAAAAUCAACCGUAGAAAUACGUGCCGGUUCGAGUCCGGCCUUCGGCACCA .................................((((((((((((((((.((((((......((((((.....))))))((((....))))))))))))))...)))..))))))))).. ( -36.60) >Sty_1 25 120 + 1 UAUAAUCCACAACGUUUUCCGCAUACCUCUUCAGUGCCGAAGUGGCGAAAUCGGUAGACGCAGUUGAUUCAAAAUCAACCGUAGAAAUACGUGCCGGUUCGAGUCCGGCCUUCGGCACCA .................................((((((((((((((((.((((((......((((((.....))))))((((....))))))))))))))...)))..))))))))).. ( -36.60) >consensus UAUAAUCCACAACGUUUUCCGCAUACCUCUUCAGUGCCGAAGUGGCGAAAUCGGUAGACGCAGUUGAUUCAAAAUCAACCGUAGAAAUACGUGCCGGUUCGAGUCCGGCCUUCGGCACCA .................................((((((((((((((((.((((((......((((((.....))))))((((....))))))))))))))...)))..))))))))).. (-34.60 = -36.60 + 2.00)
Generated by rnazCluster.pl (part of RNAz 1.0) on Fri Dec 1 11:08:21 2006