| Sequence ID | X_DroMel_CAF1 |
|---|---|
| Location | 21,080,173 – 21,080,266 |
| Length | 93 |
| Max. P | 0.943656 |
| Location | 21,080,173 – 21,080,266 |
|---|---|
| Length | 93 |
| Sequences | 3 |
| Columns | 94 |
| Reading direction | reverse |
| Mean pairwise identity | 91.14 |
| Mean single sequence MFE | -15.03 |
| Consensus MFE | -14.60 |
| Energy contribution | -14.60 |
| Covariance contribution | -0.00 |
| Combinations/Pair | 1.00 |
| Mean z-score | -2.00 |
| Structure conservation index | 0.97 |
| SVM decision value | 1.34 |
| SVM RNA-class probability | 0.943656 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>X_DroMel_CAF1 21080173 93 - 22224390 GGCAUAAAUCUUGCAUGCGGCGUAUGGCAAAUGAAUGCGCCAAUAACUCAAUAAAACAAAAAUGACAAAA-AAAUCAUGGCUAACAAAAAAAAG .(((.......)))..(((((((((.........)))))))....................((((.....-...)))).))............. ( -15.40) >DroSec_CAF1 10227 82 - 1 GGCAUAAAUCUUGCAUGCGGCGUAUGGCAAAUGAAUGCGCCAAUAACUCAAUAAAACAAAAAUGACAAA--AAAUCAUGGCUAA---------- .(((.......)))..(((((((((.........)))))))....................((((....--...)))).))...---------- ( -15.10) >DroSim_CAF1 10370 84 - 1 GGCAUAAAUCUUGCAUGCGGCGUAUGGCAAAUGAAUGCGCCAAUAACUCAAUAAAACAAAAAUGACAAAAAAAAUCAUGGCUAA---------- .(((.......)))..(((((((((.........)))))))....................((((.........)))).))...---------- ( -14.60) >consensus GGCAUAAAUCUUGCAUGCGGCGUAUGGCAAAUGAAUGCGCCAAUAACUCAAUAAAACAAAAAUGACAAAA_AAAUCAUGGCUAA__________ .(((.......)))..(((((((((.........)))))))....................((((.........)))).))............. (-14.60 = -14.60 + -0.00)
Generated by rnazCluster.pl (part of RNAz 1.0) on Mon Dec 4 13:06:19 2006