| Sequence ID | X_DroMel_CAF1 |
|---|---|
| Location | 16,592,202 – 16,592,293 |
| Length | 91 |
| Max. P | 0.932228 |
| Location | 16,592,202 – 16,592,293 |
|---|---|
| Length | 91 |
| Sequences | 3 |
| Columns | 91 |
| Reading direction | reverse |
| Mean pairwise identity | 97.07 |
| Mean single sequence MFE | -11.90 |
| Consensus MFE | -11.50 |
| Energy contribution | -11.50 |
| Covariance contribution | 0.00 |
| Combinations/Pair | 1.00 |
| Mean z-score | -2.22 |
| Structure conservation index | 0.97 |
| SVM decision value | 1.22 |
| SVM RNA-class probability | 0.932228 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>X_DroMel_CAF1 16592202 91 - 22224390 ACCAACACCCGUUCACACACAAAACUCCAAUGGGAGUAUCAUUAACGGUGUCUGAUAAUUAAAAAUAAAAUACCAUAUCAACCUCAUGAAA ..(((((((.((......))...(((((....))))).........))))).))..................................... ( -12.10) >DroSec_CAF1 4734 91 - 1 ACCAAAACCCGUUCACAAACAAAACUCCAAUGGGAGUACCAUUAACGGUGUCUGAUAAUCAAAAAUAAAAUACCAUAUCAACCUCAUGAAA ...........((((........(((((....))))).........(((((...((........))...)))))............)))). ( -11.50) >DroSim_CAF1 4781 91 - 1 ACCAACACCCGUUCACACACAAAACUCCAAUGGGAGUACCAUUAACGGUGUCUGAUAAUCAAAAAUAAAAUACCAUAUCAACCUCAUGAAA ..(((((((.((......))...(((((....))))).........))))).))..................................... ( -12.10) >consensus ACCAACACCCGUUCACACACAAAACUCCAAUGGGAGUACCAUUAACGGUGUCUGAUAAUCAAAAAUAAAAUACCAUAUCAACCUCAUGAAA ...........((((........(((((....))))).........(((((...((........))...)))))............)))). (-11.50 = -11.50 + 0.00)
Generated by rnazCluster.pl (part of RNAz 1.0) on Mon Dec 4 12:19:10 2006