| Sequence ID | X_DroMel_CAF1 |
|---|---|
| Location | 13,473,338 – 13,473,437 |
| Length | 99 |
| Max. P | 0.689929 |
| Location | 13,473,338 – 13,473,437 |
|---|---|
| Length | 99 |
| Sequences | 3 |
| Columns | 99 |
| Reading direction | reverse |
| Mean pairwise identity | 97.98 |
| Mean single sequence MFE | -15.41 |
| Consensus MFE | -14.37 |
| Energy contribution | -14.37 |
| Covariance contribution | -0.00 |
| Combinations/Pair | 1.00 |
| Mean z-score | -1.82 |
| Structure conservation index | 0.93 |
| SVM decision value | 0.33 |
| SVM RNA-class probability | 0.689929 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>X_DroMel_CAF1 13473338 99 - 22224390 UAUAUUAUACCCUACUUUUAGUGCGUGGCGACCUUAGCAAUGAACACAGCCAGGCACCAACAACAAGAACAACGAUAAUAAACCAACAACCACAUACAA ..((((((......(((((.((((.((((....(((....))).....)))).)))).))....))).......))))))................... ( -15.92) >DroEre_CAF1 17690 99 - 1 UAUAUUAUACCCUACUUUUAGUGCGUGGCGACCUUAGCAUUGAACACAGCCAGGCACCAACAACAAGAGCAACGAUAAUAAACCAACAACCACAUACAA ..((((((......(((((.((((.((((...................)))).)))).......))))).....))))))................... ( -15.01) >DroYak_CAF1 17842 99 - 1 UAUAUUAUACCCUACUUUUAGUGCGUGGCGACCUUAGCAAUGAACACAGCCAGGCACCAACAACAAGAACAACGAUCAUAAACCAACAACCACAUACAA ....................((((.((((....(((....))).....)))).)))).......................................... ( -15.30) >consensus UAUAUUAUACCCUACUUUUAGUGCGUGGCGACCUUAGCAAUGAACACAGCCAGGCACCAACAACAAGAACAACGAUAAUAAACCAACAACCACAUACAA ....................((((.((((....(((....))).....)))).)))).......................................... (-14.37 = -14.37 + -0.00)
Generated by rnazCluster.pl (part of RNAz 1.0) on Mon Dec 4 11:41:21 2006