Sequence ID | 3L_DroMel_CAF1 |
---|---|
Location | 575,925 – 576,023 |
Length | 98 |
Max. P | 0.988210 |
Location | 575,925 – 576,023 |
---|---|
Length | 98 |
Sequences | 3 |
Columns | 98 |
Reading direction | reverse |
Mean pairwise identity | 97.28 |
Mean single sequence MFE | -22.23 |
Consensus MFE | -21.32 |
Energy contribution | -21.10 |
Covariance contribution | -0.22 |
Combinations/Pair | 1.07 |
Mean z-score | -3.68 |
Structure conservation index | 0.96 |
SVM decision value | 2.11 |
SVM RNA-class probability | 0.988210 |
Prediction | RNA |
Download alignment: ClustalW | MAF
>3L_DroMel_CAF1 575925 98 - 23771897 AUCCCCAAUAAACAGCCACUGAUUCAAGUGGCGGCACAUGCCAACCCUCCGUCUCUAUCCUCACCCACCAAAAAACACAUUCGUUUGGGCCUUGCAAA ...(((((......((((((......))))))(((....)))..........................................)))))......... ( -21.90) >DroSec_CAF1 7332 98 - 1 AUCUCCAAUAAACAGCCACUGAUUCAAGUGGCGGCACAUGCCAACCCUCCGUCUCCAUCCCCGCCCACCAAAAAACACAUUCGUUUGGGCCUUGCAAA ..............((((((......))))))(((....)))....................(((((......(((......))))))))........ ( -22.90) >DroSim_CAF1 7936 98 - 1 AUCCCCAAUAAACAGCCACUGAUUCAAGUGGCGGCACAUGCCAACCCUCCGUCUCCAUCCCCACCCACCAAAAAACACAUUCGUUUGGGCCUUGCAAA ...(((((......((((((......))))))(((....)))..........................................)))))......... ( -21.90) >consensus AUCCCCAAUAAACAGCCACUGAUUCAAGUGGCGGCACAUGCCAACCCUCCGUCUCCAUCCCCACCCACCAAAAAACACAUUCGUUUGGGCCUUGCAAA ...(((((......((((((......))))))(((....)))..........................................)))))......... (-21.32 = -21.10 + -0.22)
Generated by rnazCluster.pl (part of RNAz 1.0) on Mon Dec 4 09:36:16 2006