a score=0 s 2L_DroMel_CAF1 2476620 102 + 22407834 AAUUU----UUUAGGUGCUGCCUGCUGCUGGGUGUGACAAAUUAACGUCGUGCCCAAGCGACAGCACCUCAGA--AAAUCAACAA-AAUCCUCAACGAAAUCGCGCGAC s DroSec_CAF1 55883 102 + 1 AAUUU----UUUAGGUGCUGCCUGCUGCUGGGUGUGACAAAUUAACGUCGUGCCCAAGCGACAGCACCUCAGA--AAGUCAACAA-AAUCCUCAACGAAAUCGCGCGAC s DroSim_CAF1 58885 102 + 1 AAUUU----UUUAGGUGCUGCCUGCUGCUGGGUGUGACAAAUUAACGUCGUGCCCAAGCGACAGCACCUCAGA--AAGUCAACAA-AAUCCUCAACGAAAUCGCGCGAC s DroEre_CAF1 58085 102 + 1 AAUUU----UUUAGGUGCUGCUUGCUGCUGGGUGUGACAAAUUAACGUCGUACCCAAGCGACAGCACCUCAAA--AAAUCAACAA-AAUCCUCAACGAAAUCGCGCGAC s DroYak_CAF1 58374 108 + 1 AAUUUUUUUUUUGGGUGCUGCCUGCUGCUGGGUGUGACAAAUUAACGUCGUGCCCAAGCAACAGCACCUCACAGCAAAUCAACAAAAAUCCUCAGCGAAAUCGCGCGA- s DroAna_CAF1 66057 77 + 1 AUUUU----UUU--GUGG----UGCUGCUGGGUGUGACAAAUUAACAUCGCGCCCAACUGCCAGCAU------------CAA----------CAACAAAAGCCCGCGAC