a score=0 s 2L_DroMel_CAF1 243056 98 - 22407834 ---AUUGUAC-AAUCUGGACAAUAUUGCUCAAC-AUUUUGGGGGGUAAAACUGUACGUUAUAUGUGCCCUUCUG-UGAUAUUCAUAAGCGUAUAGCUUUUCCCC s DroSim_CAF1 36420 98 - 1 ---CUUGUAC-AAUCUGGACAAAAUUGCUCAAC-AUUUUGGGGGGUGAAACUGUACGUUAUAUGUGCCCUUCUG-UGAAAUUCAUAAGCGUAUAGCUUUUCCCC s DroEre_CAF1 36397 97 - 1 ---CUUGUAG-AACCU-GACAAAAUUGCUCAAC-AUUUUAGGGGGUGAAACUGUACGUUAUAUGUGUCCUUCUG-UAAAAUUCAUAAGCGUAUAGCUUUUCCCC s DroWil_CAF1 44406 96 - 1 UAAAUUAAAG-AAU-----CAAUUCUACACAAC-AU-UUAUGGGGUUAAACUGUACGUUGUAUGUGCAAAUCUUAAGAAAUCCAUAAGCGUAUAGCUUUUCCCC s DroMoj_CAF1 40173 91 - 1 ---------CAAAUGUG-AACAAAACACUCAAA-UGUUUAGGGGGUCAAACUGUACGUUGUAUGUGUAAACA-A-UGAAAUCCAUAAGCGUAUAGCUUUUCCCC s DroAna_CAF1 41220 88 - 1 ---GUU------UUCUGGA------AGCUCAACCCUUUUGGGGGGUCAAACUGUACGUUCUAUGUGGCAAUCUU-AGAAAUUCAUAAGCGUAUAGCUUUUCCCC