| Sequence ID | 2L_DroMel_CAF1 |
|---|---|
| Location | 15,387,152 – 15,387,251 |
| Length | 99 |
| Max. P | 0.790169 |
| Location | 15,387,152 – 15,387,251 |
|---|---|
| Length | 99 |
| Sequences | 3 |
| Columns | 99 |
| Reading direction | reverse |
| Mean pairwise identity | 99.33 |
| Mean single sequence MFE | -17.67 |
| Consensus MFE | -17.67 |
| Energy contribution | -17.67 |
| Covariance contribution | 0.00 |
| Combinations/Pair | 1.00 |
| Mean z-score | -1.70 |
| Structure conservation index | 1.00 |
| SVM decision value | 0.58 |
| SVM RNA-class probability | 0.790169 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>2L_DroMel_CAF1 15387152 99 - 22407834 CCUCCAACACCCAUGACAUAAAUCAAACUUCAAACGGUGCGACUCGCGAGAACAAGCCAAGCCAAACAUCGGCAAGCACCUUUCACCCAUAAAUGGCCU ..........((((((......))...........(((((...((....)).........(((.......)))..)))))............))))... ( -17.80) >DroSec_CAF1 132967 99 - 1 CCUCCAACACCCAUGACAUAAAUCAAACUUCAAACGGUGCGACUCGCGAGAACAAGCCAAGCCAAACAUCGGCAGGCACCUUUCACCCAUAAAUGGCCU ..........((((((......))...........(((((...((....)).........(((.......)))..)))))............))))... ( -17.60) >DroSim_CAF1 137883 99 - 1 CCUCCAACACCCAUGACAUAAAUCAAACUUCAAACGGUGCGACUCGCGAGAACAAGCCAAGCCAAACAUCGGCAGGCACCUUUCACCCAUAAAUGGCCU ..........((((((......))...........(((((...((....)).........(((.......)))..)))))............))))... ( -17.60) >consensus CCUCCAACACCCAUGACAUAAAUCAAACUUCAAACGGUGCGACUCGCGAGAACAAGCCAAGCCAAACAUCGGCAGGCACCUUUCACCCAUAAAUGGCCU ..........((((((......))...........(((((...((....)).........(((.......)))..)))))............))))... (-17.67 = -17.67 + 0.00)
Generated by rnazCluster.pl (part of RNAz 1.0) on Mon Dec 4 11:43:08 2006