| Sequence ID | 2L_DroMel_CAF1 |
|---|---|
| Location | 10,788,069 – 10,788,160 |
| Length | 91 |
| Max. P | 0.992205 |
| Location | 10,788,069 – 10,788,160 |
|---|---|
| Length | 91 |
| Sequences | 3 |
| Columns | 91 |
| Reading direction | reverse |
| Mean pairwise identity | 82.81 |
| Mean single sequence MFE | -20.30 |
| Consensus MFE | -15.05 |
| Energy contribution | -15.05 |
| Covariance contribution | -0.00 |
| Combinations/Pair | 1.00 |
| Mean z-score | -3.50 |
| Structure conservation index | 0.74 |
| SVM decision value | 2.31 |
| SVM RNA-class probability | 0.992205 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>2L_DroMel_CAF1 10788069 91 - 22407834 AAUGAGAAAUGUGGUGAAUGGAAACGGAAGUCAUAUAUAGAGAUAGUUAUGUGAGAACAUUAACUUCUGUUCACUAUAGCACCAUAUAAAC ........((((((((.((((.(((((((((((((((..........))))))).........))))))))..))))..)))))))).... ( -23.20) >DroSec_CAF1 21862 74 - 1 AAUGAGAAAUGUGGUGAAAGGAAACGGAAGUCGUGUAUAGAGAUAGCUA-----------------CUGUUCACUAUAGCACCAUAUAAAC ........((((((((..((..(((((.(((..(.(....).)..))).-----------------)))))..))....)))))))).... ( -19.10) >DroSim_CAF1 23498 74 - 1 AAUAAGAAAUGUGGUGAAAGGAAACGGAAGUCAUGUAUAGAGAUAGCUA-----------------CUGUUCACUAUAGCACCAUAUAAAC ........((((((((..((..(((((.((..((.(....).))..)).-----------------)))))..))....)))))))).... ( -18.60) >consensus AAUGAGAAAUGUGGUGAAAGGAAACGGAAGUCAUGUAUAGAGAUAGCUA_________________CUGUUCACUAUAGCACCAUAUAAAC ........((((((((.......((....))....(((((.(((((....................)))))..))))).)))))))).... (-15.05 = -15.05 + -0.00)
Generated by rnazCluster.pl (part of RNAz 1.0) on Mon Dec 4 10:58:58 2006