a score=0 s 2L_DroMel_CAF1 6360569 108 + 22407834 -----GCAAAUACGGG---CGAGUUAUAGGAUCCGUGCUCUCGGUGGGGUAACCG-CCAAGCGCUGUAAAUUAUCUAAUUUUCAAUGUCGGUUCUGUUCCCAGCCGCCCC-CAUUUGG s DroSec_CAF1 8308 108 + 1 -----GCAAAUACGGG---CGAGUUAUAGGAUCCGUGCUCUCGGUGGGGUAACCG-CCGAGCGCUGUAAAUUAUCUAAUUUUCAAUGUCGGUUCGGUUCCCAGCCGCCCC-CAUUUGG s DroEre_CAF1 8132 101 + 1 -----GCAAAUACGGG---CGAGUUAUGGGAUCCGUGCUCUCGGUGGGGUAACCG-CCGAGCGCUGUAAAUUAUCUAAUUUUCAAUGUCGGU-----UCCCAGCCGCCCC-CAUU--G s DroWil_CAF1 23025 97 + 1 UAUUUGAGAGUGAAAG---UGAGGAGCCAAAUCCA--CCCGCAGUU-GGUAACCAAACACAUGCGGUAAUUUACCUAAUUUUCAACGC---UUC---UCCC----CCUCA-CAU---- s DroYak_CAF1 8473 104 + 1 --------AAAGCGGGAUAGGAGUUAUUGGAUCCCUGCUCUCGGUGGGGUAACCG-CCGAGCGCUGUAAAUUAUCUAAUUUUCAAUGUCGGC-----UCGCAGCCGCCCCCCAUUUGG