a score=0 s 2L_DroMel_CAF1 6078870 106 - 22407834 AAUAGCUAGACAGCACUUCCCGGCACUCCGC--------CUCUCUGCAUCCAUGCUUCUCUGCAGUUGUUGCGGUCUUGCCGCCUGAUUUUUCGAUUUUCCGCUGUUUGCCUUU s DroSec_CAF1 40560 108 - 1 AAUAGCUAGACAGCACUCCCCAGCACUCCGCCUCUCCGCCUCUCUGCAUCCCUGCUUCUCUGCAGUUGUUGCGGUCUUGCCGCCUGAUUUUUCGAUUUUCCGCUGUUU------ s DroSim_CAF1 41236 108 - 1 AAUAGCUAGACAGCACUCCCCGGCACUCCGCCUCUCCGCCUCUCUGCAUCCCUGCUUCUCUGCAGUUGUUGCGGUCUUGCCGCCUGAUUUUUCGAUUUUCCGCUGUUU------