a score=0 s 2L_DroMel_CAF1 5578403 110 + 22407834 -GGGAA-------AAGCUGGAGUGUCGAGCAGCCUGCAUGGGUUCGAAUUCAAUAUGGCGGCACAG--AGGAAGUGCCACAGACGCAGUGGCAUGUGCAUCUGUGCAUCUGUGCGUGCCA s DroSec_CAF1 22402 105 + 1 -------------AAGCUGGAGUGGCGAGCAGCCUGCAUGGGUUCGAAUUCAAUAUGGCGGCACAG--AGGAAGUGCCACAGACGCAGUGGCAUGUGCAUCUGUGCAUCUGUGCGUGCCA s DroSim_CAF1 24056 105 + 1 -------------AAGCUGGAGUGGCGAGCAGCCUGCAUGGGUUCGAAUUCAAUAUGGCGGCACAG--AGGAAGUGCCACAGACGCAGUGGCAUGUGCAUCUGUGCAUCUGUGCGUGCCA s DroYak_CAF1 22280 120 + 1 CGGGAAACCGGGGUAGCUGAAGUGGCGAGCAGCCUGCACGGUUUCGAAUUCAAUAUGGCGGCACUGUGGGGAUGUGCCACAGACGCAGUGGCAUGUGCAUCCGUGCAUCUGUGCGUGCCA