a score=0 s 2L_DroMel_CAF1 2943586 104 + 22407834 AAGCUUUUCCUCUGGCCAA-----CUGGUCGUCUUCCAUUUAUUUUCGGUGACGUGCAUAAACUAUUUGCAAGCACUGUUCUUG---GUUGGGGGCAGGGA-AGUUCCUGCGA s DroSim_CAF1 60453 108 + 1 AAGCUUCUCCACUGGCCGA-----CUCGUCGUCUUCCAUUUAUUUUCGGUGACGUGCAUAAACUAUUUGCAAGCACUGUUGCUGGCGGUUGGGGGCAGGGAAAGUUCCUGCGA s DroEre_CAF1 60843 104 + 1 AAGCUUUUCCUCCGCUCGACUCGACUCGCCGUCUUCCAUUUAUUUUCGGUGACGUGCAUAAACUAUUUGCAAGCACUGUU-------GU-GGGGGCAGGA-AAGUUCCUCUGA s DroYak_CAF1 60922 107 + 1 AAGCUUUUCCUCUGGCCGACUCGACUCGUCGCCUUCCAUUUAUUUUCGGUGACGUGCAUAAACUAUUUGCAAGCACUGUUA------GUGGGGGGCAGGAAAAGUUCCUCCGA