a score=0 s 2L_DroMel_CAF1 2927608 106 + 22407834 AAAGAAUAACAGAAUGAGGGGCCACAAAAAGUUGCAGUUUUCCAGUGACUUUUGGCCAAGUUGAGUGCGGCACAUCAACAGGAUUUCAUUUCGCUCUCUC--------UUUCGC s DroSim_CAF1 46992 98 + 1 AAAUAAUAACAGAAUGAGGGGCCACAAAAAGUUGCAGUUUUCCAGUGACUUUUGGCCAAGUUGAGUGCGGCACAUCAACAGGAUUUCAUCUCUCUCU----------------C s DroEre_CAF1 46951 105 + 1 ---------CAGGAUGAGGGGCCACAAAAAGUUGCAGUUUUCCAGUGACUUUUGGCCAAGUUGAGUGCGGCACGUCAACAGGAUUUCAUUUCGCUCUCUCUCCCUCCCUCUCGC